Your job contains 1 sequence.
>psy13286
MVQARQEPTQFLYLNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTG
GTNLRDDIMRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLD
HVISILPHERQILLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQK
VHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFR
SGLCRNLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE
DRYALHRIEKELGTEIKSIPKVIDPALYVARPEDMDRDNSTGASEENNVSK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13286
(351 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0004419 - symbol:me31B "maternal expression at 31B... 1449 2.1e-148 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 1308 1.8e-133 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 1308 1.8e-133 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 1229 4.3e-125 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 1227 7.0e-125 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 1227 7.0e-125 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 1227 7.0e-125 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 1227 7.0e-125 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 1227 7.0e-125 1
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 1227 7.0e-125 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 1223 1.9e-124 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 1223 1.9e-124 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 1223 1.9e-124 1
ZFIN|ZDB-GENE-070912-83 - symbol:ddx6 "DEAD (Asp-Glu-Ala-... 1223 1.9e-124 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 1218 6.3e-124 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 1203 2.4e-122 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 1193 2.8e-121 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 1187 1.2e-120 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 1186 1.5e-120 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 1179 8.5e-120 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 1174 2.9e-119 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 1168 1.3e-118 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 1163 4.2e-118 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 1163 4.2e-118 1
GENEDB_PFALCIPARUM|PFC0915w - symbol:PFC0915w "ATP-depend... 1153 4.9e-117 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 613 8.1e-60 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 613 8.1e-60 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 611 1.3e-59 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 601 1.5e-58 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 601 1.5e-58 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 599 2.5e-58 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 591 1.7e-57 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 586 5.9e-57 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 585 7.5e-57 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 585 7.5e-57 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 583 1.2e-56 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 582 1.6e-56 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 574 1.1e-55 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 570 2.9e-55 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 569 3.7e-55 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 568 4.8e-55 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 566 7.8e-55 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 566 7.8e-55 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 566 7.8e-55 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 566 7.8e-55 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 566 7.8e-55 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 566 7.8e-55 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 566 7.8e-55 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 566 7.8e-55 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 566 7.8e-55 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 565 9.9e-55 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 563 1.6e-54 1
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 562 2.1e-54 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 559 4.3e-54 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 558 5.5e-54 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 558 5.5e-54 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 558 5.5e-54 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 558 5.5e-54 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 558 5.5e-54 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 558 5.5e-54 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 558 5.5e-54 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 557 7.0e-54 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 557 7.0e-54 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 557 7.0e-54 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 554 1.5e-53 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 553 1.9e-53 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 553 1.9e-53 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 553 1.9e-53 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 553 1.9e-53 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 553 1.9e-53 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 553 1.9e-53 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 553 1.9e-53 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 553 1.9e-53 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 553 1.9e-53 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 552 2.4e-53 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 552 2.4e-53 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 551 3.0e-53 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 551 3.0e-53 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 551 3.0e-53 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 549 4.9e-53 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 517 1.2e-49 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 517 1.2e-49 1
TAIR|locus:2147987 - symbol:UAP56a "homolog of human UAP5... 509 8.5e-49 1
UNIPROTKB|Q5WR10 - symbol:DDX39B "Spliceosome RNA helicas... 503 3.7e-48 1
UNIPROTKB|H0Y7G4 - symbol:DDX39B "Spliceosome RNA helicas... 503 3.7e-48 1
UNIPROTKB|Q13838 - symbol:DDX39B "Spliceosome RNA helicas... 503 3.7e-48 1
UNIPROTKB|Q29024 - symbol:DDX39B "Spliceosome RNA helicas... 503 3.7e-48 1
MGI|MGI:99240 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box... 503 3.7e-48 1
RGD|70923 - symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box pol... 503 3.7e-48 1
ZFIN|ZDB-GENE-040426-1259 - symbol:ddx39b "DEAD (Asp-Glu-... 500 7.7e-48 1
UNIPROTKB|F8VQ10 - symbol:DDX39B "Spliceosome RNA helicas... 499 9.8e-48 1
UNIPROTKB|Q3T147 - symbol:DDX39B "Spliceosome RNA helicas... 498 1.2e-47 1
UNIPROTKB|Q3AFI3 - symbol:CHY_0229 "ATP-dependent RNA hel... 497 1.6e-47 1
TIGR_CMR|CHY_0229 - symbol:CHY_0229 "ATP-dependent RNA he... 497 1.6e-47 1
UNIPROTKB|E2QY95 - symbol:DDX39A "Uncharacterized protein... 496 2.0e-47 1
UNIPROTKB|F1SCH3 - symbol:DDX39A "Uncharacterized protein... 496 2.0e-47 1
UNIPROTKB|Q5ZHZ0 - symbol:DDX39B "Spliceosome RNA helicas... 494 3.3e-47 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 494 3.3e-47 1
UNIPROTKB|Q5E970 - symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) b... 493 4.2e-47 1
UNIPROTKB|K9J6N8 - symbol:DDX39B "Spliceosome RNA helicas... 493 4.2e-47 1
WARNING: Descriptions of 804 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 286/344 (83%), Positives = 311/344 (90%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L ++ P K +A L++VPTRELALQTSQICIELAKHL+++VMVTTGGT L+DDI+RIYQ
Sbjct: 117 LEQIDPTKDYIQA-LVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQ 175
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
KV LIIATPGRILDLMDK+VA+M HC+ILVLDEADKLLS DF+GMLDHVI LP + QIL
Sbjct: 176 KVQLIIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQIL 235
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
L+SATFPLTVKNFMEKHL++PYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI
Sbjct: 236 LFSATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 295
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNSTQRVELLAKKITELGYCCYYIHA+MAQAHRNRVFHDFR GLCRNLVCSDLF
Sbjct: 296 NQSIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLF 355
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGIDVQAVNVVINFDFP+MAETYLHRIGRSGR+GHLGIAINLITYEDR+ LHRIEKELG
Sbjct: 356 TRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELG 415
Query: 314 TEIKSIPKVIDPALYVARPE----DM--DRDNSTGASEENNVSK 351
TEIK IPKVIDPALYVA D + D + A+EE NVSK
Sbjct: 416 TEIKPIPKVIDPALYVANVGASVGDTCNNSDLNNSANEEGNVSK 459
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 249/330 (75%), Positives = 287/330 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
+ K+ PA +A ++IVPTRELALQTSQIC+EL+KH+ +KVMVTTGGT+LRDDIMR+
Sbjct: 102 IEKIQPALKAIQA-MVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNG 160
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VHL+IATPGRILDLM+K VA M+HCK LVLDEADKLLSQDF+G+LD +I+ LP ERQ++
Sbjct: 161 TVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVM 220
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
LYSATFP TV +FM+KH+ PYEINLMEELTL GVTQYYAFVQE+QKVHCLNTLF KLQI
Sbjct: 221 LYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQKVHCLNTLFRKLQI 280
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNSTQRVELLAKKITE+GY CYYIH++MAQ HRNRVFHDFR G CRNLVCSDL
Sbjct: 281 NQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLL 340
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFP+ AETYLHRIGRSGR+GHLG+AINLITYEDR+ L RIE+EL
Sbjct: 341 TRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELR 400
Query: 314 TEIKSIPKVIDPALYVARPEDMDRDNSTGA 343
T I+ IPK +DP LYVA + +D + T A
Sbjct: 401 TRIEPIPKTVDPKLYVADQQLVDAADETTA 430
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 1308 (465.5 bits), Expect = 1.8e-133, P = 1.8e-133
Identities = 249/330 (75%), Positives = 287/330 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
+ K+ PA +A ++IVPTRELALQTSQIC+EL+KH+ +KVMVTTGGT+LRDDIMR+
Sbjct: 102 IEKIQPALKAIQA-MVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNG 160
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VHL+IATPGRILDLM+K VA M+HCK LVLDEADKLLSQDF+G+LD +I+ LP ERQ++
Sbjct: 161 TVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVM 220
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
LYSATFP TV +FM+KH+ PYEINLMEELTL GVTQYYAFVQE+QKVHCLNTLF KLQI
Sbjct: 221 LYSATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQKVHCLNTLFRKLQI 280
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNSTQRVELLAKKITE+GY CYYIH++MAQ HRNRVFHDFR G CRNLVCSDL
Sbjct: 281 NQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLL 340
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFP+ AETYLHRIGRSGR+GHLG+AINLITYEDR+ L RIE+EL
Sbjct: 341 TRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELR 400
Query: 314 TEIKSIPKVIDPALYVARPEDMDRDNSTGA 343
T I+ IPK +DP LYVA + +D + T A
Sbjct: 401 TRIEPIPKTVDPKLYVADQQLVDAADETTA 430
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 228/317 (71%), Positives = 277/317 (87%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L K P K + LI+VPTRELALQTSQ+C EL K++NV+VM +TGGT+L+DDIMR+Y
Sbjct: 108 LEKTDPTKDVIQV-LILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYN 166
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VH+++ATPGR+LDL K VAN+ +C +++DEADKLLSQ+F+ +++ +I+ LP +RQIL
Sbjct: 167 PVHILVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQIL 226
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
L+SATFP+TVK+F E +L+ +EINLMEELTLKGVTQYYAFV+ERQK+HCLNTLFSKLQI
Sbjct: 227 LFSATFPVTVKSFKEHYLQQAFEINLMEELTLKGVTQYYAFVEERQKIHCLNTLFSKLQI 286
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNS RVELLAKKITELGY C++IHA+M QAHRNRVFHDFR+G CRNLV SDLF
Sbjct: 287 NQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLF 346
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+Q VNVVINFDFPK +ETYLHRIGRSGR+GHLG+AINLITYEDR++L++IE+ELG
Sbjct: 347 TRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELG 406
Query: 314 TEIKSIPKVIDPALYVA 330
TEIK IP VID +LY A
Sbjct: 407 TEIKPIPPVIDKSLYAA 423
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 1227 (437.0 bits), Expect = 7.0e-125, P = 7.0e-125
Identities = 235/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 234/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA ++H +++VLDEADKLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 231/304 (75%), Positives = 269/304 (88%)
Query: 28 LIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+ VH++IATPGRIL
Sbjct: 167 MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRIL 226
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
DL+ K VA +DH +++VLDEADKLLSQDF +++ +I LP RQILLYSATFPL+V+ F
Sbjct: 227 DLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLYSATFPLSVQKF 286
Query: 147 MEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
M HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNS+QRV
Sbjct: 287 MTLHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRV 346
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
ELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DLFTRGID+QAVNVVI
Sbjct: 347 ELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVI 406
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPA 326
NFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++LGTEIK IP ID
Sbjct: 407 NFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSSIDKN 466
Query: 327 LYVA 330
LYVA
Sbjct: 467 LYVA 470
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 225/301 (74%), Positives = 267/301 (88%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
+IIVPTRELALQTSQ+C EL KHL ++VMVTTGGT+L+DDIMR+YQ VHL++ TPGRILD
Sbjct: 203 VIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILD 262
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L K V + C +LV+DEADKLLSQ+F+ ++H+IS LP RQIL++SATFP+TVK+F
Sbjct: 263 LTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSATFPVTVKDFK 322
Query: 148 EKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVE 207
++ L +PY INLM+ELTLKG+TQ+YAFV+ERQK+HCLNTLFSKLQINQSIIFCNS RVE
Sbjct: 323 DRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVE 382
Query: 208 LLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVIN 267
LLAKKITELGY C+YIHA+M Q HRNRVFHDFR+G CRNLVC+DLFTRGID+QAVNVVIN
Sbjct: 383 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 442
Query: 268 FDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPAL 327
FDFPK AETYLHR+GRSGR+GHLG+A+NLITYEDR+ L+RIE+ELGTEIK IP ID A+
Sbjct: 443 FDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAI 502
Query: 328 Y 328
Y
Sbjct: 503 Y 503
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 232/318 (72%), Positives = 277/318 (87%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L ++ K + +A ++IVPTRELALQ SQICI+++KH+ VKVM TTGGTNLRDDIMR+
Sbjct: 156 LERIDLKKDSIQAAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLD 215
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
+ VH++IATPGRILDL+ K VA + +++VLDEADKLLSQDF M++ ++S L +RQI
Sbjct: 216 ETVHVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQI 275
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 276 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 335
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 336 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 395
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+ ETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 396 FTRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQL 455
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 456 GTEIKPIPSSIDKSLYVA 473
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 233/318 (73%), Positives = 276/318 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L +L K +A ++IVPTRELALQ SQICI+++KH+ KVM TTGGTNLRDDIMR+
Sbjct: 155 LERLDLKKDNIQA-MVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLD 213
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH++IATPGRILDL+ K VA ++H +++VLDEA+KLLSQDF +++ +I LP RQI
Sbjct: 214 DTVHVVIATPGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQI 273
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
LLYSATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+LQ
Sbjct: 274 LLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
INQSIIFCNS+QRVELLAKKI++LGY C+YIHA+M Q HRNRVFHDFR+GLCRNLVC+DL
Sbjct: 334 INQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDL 393
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
FTRGID+QAVNVVINFDFPK+AETYLHRIGRSGR+GHLG+AINLITY+DR+ L IE++L
Sbjct: 394 FTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL 453
Query: 313 GTEIKSIPKVIDPALYVA 330
GTEIK IP ID +LYVA
Sbjct: 454 GTEIKPIPSNIDKSLYVA 471
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 1203 (428.5 bits), Expect = 2.4e-122, P = 2.4e-122
Identities = 231/324 (71%), Positives = 274/324 (84%)
Query: 28 LIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
+++VPTRELALQ SQI I ++KHL +KVM TTGGTNLRDDIMR+ + VH+IIATPGRIL
Sbjct: 160 IVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVHVIIATPGRIL 219
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
DL+ K VA +D ++ V+DEADKLLSQDF +++ +IS LP +RQILLYSATFP++V+ F
Sbjct: 220 DLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYSATFPISVQKF 279
Query: 147 MEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
M KHL+ PYEINLM+ELTLKG+TQYYA+V ERQKVHCLNTLFS+LQINQSIIFCNSTQRV
Sbjct: 280 MTKHLQKPYEINLMDELTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRV 339
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
ELLAKKIT+LGY C+YIHA+M Q +RNRVFHDFR+GLCRNLVC+DLFTRGID+QAVNVVI
Sbjct: 340 ELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVI 399
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPA 326
NFDFPK AETYLHRIGRSGRYGHLG+AINLIT EDR+ L IE +L T+IK IP ID +
Sbjct: 400 NFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMTDIKPIPSSIDKS 459
Query: 327 LYVARPEDMDRDNSTGASEENNVS 350
LYVA M+ D A + ++
Sbjct: 460 LYVAEFHSMNPDEEEAAHKTGELN 483
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 1193 (425.0 bits), Expect = 2.8e-121, P = 2.8e-121
Identities = 220/315 (69%), Positives = 271/315 (86%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L K+ P +A +I+VPTRELALQTSQ+C EL+K+L ++VMVTTGGT+LRDDIMR+YQ
Sbjct: 213 LEKIDPENNVIQA-VILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQ 271
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VHL++ TPGRILDL K V + C +LV+DEADKLLS +F+ ++ +I LP RQIL
Sbjct: 272 PVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQIL 331
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
++SATFP+TVK+F +++LK PY INLM++LTL GVTQYYAFV+ERQKVHCLNTLFSKLQI
Sbjct: 332 MFSATFPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQI 391
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNS RVELLAKKITELGY C+YIHA+M Q HRNRVFHDFR+G CRNLVC+DLF
Sbjct: 392 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLF 451
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFP+ +E+YLHR+GRSGR+GHLG+A+NL+TYEDR+ +++ E+ELG
Sbjct: 452 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 511
Query: 314 TEIKSIPKVIDPALY 328
TEIK IP +ID A+Y
Sbjct: 512 TEIKPIPSLIDKAIY 526
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 1187 (422.9 bits), Expect = 1.2e-120, P = 1.2e-120
Identities = 222/303 (73%), Positives = 258/303 (85%)
Query: 27 TLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
TLI+VPTRELALQTSQ+C L KH+NVKVMVTTGGT LRDDI+R+ VH+++ TPGR+L
Sbjct: 115 TLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHIVVGTPGRVL 174
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
DL K VA+ C V+DEADKLLS +F +++ ++S P RQI LYSATFPL VKNF
Sbjct: 175 DLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNF 234
Query: 147 MEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
M+KHL PYEINLM+ELTL+GVTQYYAFV E QKVHCLNTLFSKLQINQSIIFCNST RV
Sbjct: 235 MDKHLNKPYEINLMDELTLRGVTQYYAFVDESQKVHCLNTLFSKLQINQSIIFCNSTNRV 294
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
ELLAKKITELGY C+Y HA+M Q+HRNRVFH+FR+G+CRNLVCSDL TRGID+QAVNVVI
Sbjct: 295 ELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVI 354
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPA 326
NFDFPK AETYLHRIGRSGR+GH G+AI+ I++ DR+ L+RIE ELGTEI+ IP IDP+
Sbjct: 355 NFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRIENELGTEIQPIPPSIDPS 414
Query: 327 LYV 329
LYV
Sbjct: 415 LYV 417
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 1186 (422.6 bits), Expect = 1.5e-120, P = 1.5e-120
Identities = 219/315 (69%), Positives = 269/315 (85%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L K+ P +A +I+VPTRELALQTSQ+C EL+K+LN++VMVTTGGT+LRDDIMR++Q
Sbjct: 183 LEKIDPNNNVIQA-MILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQ 241
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VHL++ TPGRILDL K V + C +LV+DEADKLLS +F+ L+ +I LP RQ L
Sbjct: 242 PVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFL 301
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
++SATFP+TVK F ++HL+ PY INLM++LTL GVTQYYAFV+ERQKVHCLNTLFSKLQI
Sbjct: 302 MFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQI 361
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNS RVELLAKKITELGY C+YIHA+M Q HRNRVFH+FR+G CRNLVC+DLF
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFP+ +E+YLHR+GRSGR+GHLG+A+NL+TYEDR+ +++ E+ELG
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 314 TEIKSIPKVIDPALY 328
TEIK IP ID A+Y
Sbjct: 482 TEIKPIPSNIDQAIY 496
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 1179 (420.1 bits), Expect = 8.5e-120, P = 8.5e-120
Identities = 223/344 (64%), Positives = 277/344 (80%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L ++ P K T LI+VPTRELALQTS +C L KHL + VMVTTGGT L DDI+R+
Sbjct: 98 LERINP-KSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLND 156
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VH+++ TPGR+LDL K VA++ C V+DEADKLLS +F +++ ++S P +RQ++
Sbjct: 157 AVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVM 216
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
L+SATFP+ VK+F ++H+++PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLFSKLQI
Sbjct: 217 LFSATFPMIVKSFKDRHMRNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI 276
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNST RVELLAKKITELGY C+Y HARM Q HRNRVFHDFR+G+CRNLVCSDL
Sbjct: 277 NQSIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLL 336
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFPK AETYLHRIGRSGR+GHLG+AINLI ++DR+ L++IE+ELG
Sbjct: 337 TRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELG 396
Query: 314 TEIKSIPKVIDPALYVA-RPEDMDR------DNSTGASEENNVS 350
TEI+ IP+ ID LYV P+ + R S GA+ +N S
Sbjct: 397 TEIQPIPQNIDKKLYVYDSPDTIPRPISNPPQQSQGATAASNPS 440
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 1174 (418.3 bits), Expect = 2.9e-119, P = 2.9e-119
Identities = 217/325 (66%), Positives = 270/325 (83%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L + P K++ LI+VPTRELA+QTSQ+C L KHL + VMVTTGGT LRDDI+R+
Sbjct: 106 LETINP-KVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQD 164
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VH+++ TPGRILDL K VA++ C + ++DEADKLLS +F +++ ++ P +RQ++
Sbjct: 165 PVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVM 224
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
L+SATFP++VK F +K++ +PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLFSKLQI
Sbjct: 225 LFSATFPISVKEFSDKNMTNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSKLQI 284
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQSIIFCNST RVELLAKKITELGY C+Y HA+M Q RNRVFHDFR+G+CRNLVCSDL
Sbjct: 285 NQSIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLL 344
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFPK AETYLHRIGRSGRYGHLG+AINLI++EDR+ L+ IE++LG
Sbjct: 345 TRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLG 404
Query: 314 TEIKSIPKVIDPALYVA-RPEDMDR 337
TEI+ IP ID +LYV PE + R
Sbjct: 405 TEIQPIPSTIDKSLYVYDNPETIPR 429
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 1168 (416.2 bits), Expect = 1.3e-118, P = 1.3e-118
Identities = 218/321 (67%), Positives = 264/321 (82%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L K+ P K+ LI+VPTRELALQTSQ+ L KH + MVTTGGTNLRDDI+R+ +
Sbjct: 105 LEKVKP-KLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNE 163
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
VH+++ TPGR+LDL ++VA++ C + ++DEADK+LS+DFK +++ ++S LP Q L
Sbjct: 164 TVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSL 223
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
L+SATFPLTVK FM KHL PYEINLMEELTLKG+TQYYAFV+ERQK+HCLNTLFSKLQI
Sbjct: 224 LFSATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSKLQI 283
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
NQ+IIFCNST RVELLAKKIT+LGY CYY HARM Q RN+VFH+FR G R LVCSDL
Sbjct: 284 NQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLL 343
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
TRGID+QAVNVVINFDFPK AETYLHRIGRSGR+GHLG+AINLI + DR+ L++IE+ELG
Sbjct: 344 TRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELG 403
Query: 314 TEIKSIPKVIDPALYVARPED 334
TEI +IP ID +LYVA ++
Sbjct: 404 TEIAAIPATIDKSLYVAENDE 424
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 213/319 (66%), Positives = 265/319 (83%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV 75
+L K+ LI+VPTRELALQTSQ+ L KH+ + MVTTGGT+LRDDI+R++ V
Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPV 149
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
H+++ TPGR+LDL ++V ++ C + V+DEADK+LS++FKG+++ ++ P RQ LL+
Sbjct: 150 HILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLF 209
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ 195
SATFPL VK+FM+KHL PYEINLM+ELTLKG++Q+YAFV+E+QK+HCLNTLFSKLQINQ
Sbjct: 210 SATFPLAVKSFMDKHLTKPYEINLMDELTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQ 269
Query: 196 SIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTR 255
SIIFCNST RVELLAKKITELGY CYY HA+M Q RN+VFH+FR G RNLVCSDL TR
Sbjct: 270 SIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTR 329
Query: 256 GIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTE 315
GID+QAVNVVINFDFPK AETYLHRIGRSGR+GHLG+AINL+++ DRY+L++IE+ELGTE
Sbjct: 330 GIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGTE 389
Query: 316 IKSIPKVIDPALYVARPED 334
IK IP ID +LYVA D
Sbjct: 390 IKPIPATIDKSLYVAENAD 408
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 213/319 (66%), Positives = 265/319 (83%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV 75
+L K+ LI+VPTRELALQTSQ+ L KH+ + MVTTGGT+LRDDI+R++ V
Sbjct: 90 QLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPV 149
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
H+++ TPGR+LDL ++V ++ C + V+DEADK+LS++FKG+++ ++ P RQ LL+
Sbjct: 150 HILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLF 209
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ 195
SATFPL VK+FM+KHL PYEINLM+ELTLKG++Q+YAFV+E+QK+HCLNTLFSKLQINQ
Sbjct: 210 SATFPLAVKSFMDKHLTKPYEINLMDELTLKGISQFYAFVEEKQKLHCLNTLFSKLQINQ 269
Query: 196 SIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTR 255
SIIFCNST RVELLAKKITELGY CYY HA+M Q RN+VFH+FR G RNLVCSDL TR
Sbjct: 270 SIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLTR 329
Query: 256 GIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTE 315
GID+QAVNVVINFDFPK AETYLHRIGRSGR+GHLG+AINL+++ DRY+L++IE+ELGTE
Sbjct: 330 GIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGTE 389
Query: 316 IKSIPKVIDPALYVARPED 334
IK IP ID +LYVA D
Sbjct: 390 IKPIPATIDKSLYVAENAD 408
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 1153 (410.9 bits), Expect = 4.9e-117, P = 4.9e-117
Identities = 217/301 (72%), Positives = 260/301 (86%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+VPTRELALQTS + EL KH+ V+ MVTTGGT+LR+DIMR+Y VH++ TPGRILD
Sbjct: 132 LILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHILCGTPGRILD 191
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L +K VAN+ C I+V+DEADKLLS +F+ +++ ++ LP E+QIL+YSATFP+TVK F
Sbjct: 192 LANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSATFPVTVKEFR 251
Query: 148 EKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVE 207
+L D +EINLM+ELTLKG+TQYYAFV+ERQKVHCLNTLF+KLQINQ+IIFCNS RVE
Sbjct: 252 AIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQAIIFCNSITRVE 311
Query: 208 LLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVIN 267
LLAKKITELGY +YIHARM+Q HRNRVFHDFR+G CR LV SDLFTRGID+Q+VNVVIN
Sbjct: 312 LLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRGIDIQSVNVVIN 371
Query: 268 FDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPAL 327
FDFPK +ETYLHRIGRSGRYGHLG+AINLIT+EDR+ L++IE ELGTEI+ IP IDP+L
Sbjct: 372 FDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELGTEIQPIPNEIDPSL 431
Query: 328 Y 328
Y
Sbjct: 432 Y 432
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 127/308 (41%), Positives = 187/308 (60%)
Query: 25 KAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
KAT LI+ PTRELALQ + + +L V V + GGT++ DDI V +++ TP
Sbjct: 90 KATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVGTP 149
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLT 142
GR+LD+++++ D K+ +LDEAD++LS FK + ++ +LP QI+L SAT P
Sbjct: 150 GRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLLSATMPQD 209
Query: 143 VKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFC 200
V K + +P I + +ELTL+G+ Q+Y V+ E K CL L+ + + Q++IFC
Sbjct: 210 VLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFC 269
Query: 201 NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQ 260
N+ +VE L K+ E + IHA + QA R+ + +FRSG R L+ +DL RGIDVQ
Sbjct: 270 NTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQ 329
Query: 261 AVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
V++VIN+D P E Y+HRIGR GR+G G+AIN +T D + IEK T+I+ +P
Sbjct: 330 QVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMP 389
Query: 321 KVIDPALY 328
I AL+
Sbjct: 390 ADIG-ALF 396
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 127/308 (41%), Positives = 187/308 (60%)
Query: 25 KAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
KAT LI+ PTRELALQ + + +L V V + GGT++ DDI V +++ TP
Sbjct: 90 KATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDIEAFRSGVQIVVGTP 149
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLT 142
GR+LD+++++ D K+ +LDEAD++LS FK + ++ +LP QI+L SAT P
Sbjct: 150 GRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPETTQIVLLSATMPQD 209
Query: 143 VKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFC 200
V K + +P I + +ELTL+G+ Q+Y V+ E K CL L+ + + Q++IFC
Sbjct: 210 VLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFC 269
Query: 201 NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQ 260
N+ +VE L K+ E + IHA + QA R+ + +FRSG R L+ +DL RGIDVQ
Sbjct: 270 NTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQ 329
Query: 261 AVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
V++VIN+D P E Y+HRIGR GR+G G+AIN +T D + IEK T+I+ +P
Sbjct: 330 QVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYSTQIEEMP 389
Query: 321 KVIDPALY 328
I AL+
Sbjct: 390 ADIG-ALF 396
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 117/298 (39%), Positives = 191/298 (64%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L ++LNV ++ GGT++RDD ++ +H+++ TPGR+ D
Sbjct: 101 LVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGD 160
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++++ + K+ VLDEAD++LS+ FK + V +P + Q++L SAT P V +
Sbjct: 161 MINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVT 220
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
+ +++P I + +ELTL+G+ Q+Y VQ+ + K CL L++ + + Q++IFCN+ ++
Sbjct: 221 NRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRK 280
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L +K+TE + +H M QA R+ + +FRSG R L+ +D+ RGIDVQ V++V
Sbjct: 281 VDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLV 340
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVI 323
IN+D P E Y+HRIGRSGR+G G+AIN +T D L IE T+I+ +P+ I
Sbjct: 341 INYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEIESYYTTQIEEMPESI 398
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 122/302 (40%), Positives = 192/302 (63%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + L +L VK GGT +R+DI ++ Q VH+++ TPGR+ D
Sbjct: 95 LILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYD 154
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++DK+ +D K+ +LDEAD++LS+ FK + V L + Q+ L+SAT P +
Sbjct: 155 MIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQVALFSATMPQEILELT 214
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
+ ++DP I + +ELTL+G+ Q+Y V++ + K+ L L+ L I QSII+CN+ ++
Sbjct: 215 TRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKK 274
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V++L +++ + +H M Q R+ + +FRSG R LV +DL RGIDVQ V++V
Sbjct: 275 VDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLV 334
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYA--LHRIEKELGTEIKSIP-KV 322
IN+D P +TY+HRIGRSGR+G G+AIN +T +D+ L +IE T+I+ +P +V
Sbjct: 335 INYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEV 394
Query: 323 ID 324
D
Sbjct: 395 AD 396
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 122/302 (40%), Positives = 192/302 (63%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + L +L VK GGT +R+DI ++ Q VH+++ TPGR+ D
Sbjct: 95 LILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKLKQGVHMVVGTPGRVYD 154
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++DK+ +D K+ +LDEAD++LS+ FK + V L + Q+ L+SAT P +
Sbjct: 155 MIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQVALFSATMPQEILELT 214
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
+ ++DP I + +ELTL+G+ Q+Y V++ + K+ L L+ L I QSII+CN+ ++
Sbjct: 215 TRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYETLTITQSIIYCNTRKK 274
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V++L +++ + +H M Q R+ + +FRSG R LV +DL RGIDVQ V++V
Sbjct: 275 VDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARGIDVQQVSLV 334
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYA--LHRIEKELGTEIKSIP-KV 322
IN+D P +TY+HRIGRSGR+G G+AIN +T +D+ L +IE T+I+ +P +V
Sbjct: 335 INYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKKIESYYSTQIEEMPLEV 394
Query: 323 ID 324
D
Sbjct: 395 AD 396
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 118/309 (38%), Positives = 189/309 (61%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L KL P + + LI+ PTRELA Q ++ I + +N++ GGT +RDD+ + +
Sbjct: 84 LQKLDP-NVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDMNALRE 142
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
+++ TPGRI D++ ++V D K+ +LDEAD++LS+ F + + +LP Q++
Sbjct: 143 GPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQSTQVV 202
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKL 191
L SAT P V K ++DP I + +ELTL+G+ Q+Y V++ + K+ L+ L+ +
Sbjct: 203 LLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSDLYETV 262
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IFCN+ ++V+ L K+T + +H M QA R+ + +FRSG R L+ +D
Sbjct: 263 TITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATD 322
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T +D + IE+
Sbjct: 323 LLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQF 382
Query: 312 LGTEIKSIP 320
T+I+ +P
Sbjct: 383 YSTQIEEMP 391
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 114/295 (38%), Positives = 185/295 (62%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + L +NV+ GGT +RDD+ + VH+++ TPGR+ D
Sbjct: 91 LILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDMAALQAGVHVVVGTPGRVHD 150
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ D ++ VLDEAD++LS+ FK + + +LP Q++L SAT P V
Sbjct: 151 MIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPPTAQVVLLSATMPQDVLEVT 210
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K ++DP I + +ELTL+G+ Q+Y V++ + K+ L L+ + + Q++IFCN+ ++
Sbjct: 211 TKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRK 270
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L +++TE + +H M QA R+ + H+FR+G R L+ +DL RGIDVQ V++V
Sbjct: 271 VDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLV 330
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGR GR+G G++IN +T +D + IE+ T I+ +P
Sbjct: 331 INYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMP 385
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 120/295 (40%), Positives = 181/295 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + L +++ V GGTN+R+D + H+++ TPGR+ D
Sbjct: 102 LILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRVYD 161
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++++V + K+ VLDEAD++LS+ FK + V +LP + Q++L SAT P V
Sbjct: 162 MINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVS 221
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
++DP I + EELTL+G+ Q+Y V QE K+ L L+ L I QS+IFCN+ ++
Sbjct: 222 RCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRK 281
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L ++++ + +H M Q R + FRSG R L+ +DL RGIDVQ V++V
Sbjct: 282 VDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLV 341
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGR GR+G G+AIN IT +DR L IE+ T I+ +P
Sbjct: 342 INYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMP 396
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 115/304 (37%), Positives = 186/304 (61%)
Query: 22 ITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIAT 81
+ + L++ PTRELALQ ++ + LA H+++KV GGT+ +D + + +++ T
Sbjct: 88 VKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGT 146
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPL 141
PGR+ D + ++ D K+ +LDEAD++LS FK + + ++LP Q++L SAT P
Sbjct: 147 PGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPN 206
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIF 199
V K +++P I + +ELTL+G+ Q+Y V+E + K CL L+ + + Q++IF
Sbjct: 207 DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIF 266
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
CN+ ++VE L K+ + I++ + Q R+ + +FRSG R L+ +DL RGIDV
Sbjct: 267 CNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDV 326
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
Q V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED A+ +EK T+I+ +
Sbjct: 327 QQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEEL 386
Query: 320 PKVI 323
P I
Sbjct: 387 PSDI 390
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 115/304 (37%), Positives = 186/304 (61%)
Query: 22 ITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIAT 81
+ + L++ PTRELALQ ++ + LA H+++KV GGT+ +D + + +++ T
Sbjct: 88 VKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGT 146
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPL 141
PGR+ D + ++ D K+ +LDEAD++LS FK + + ++LP Q++L SAT P
Sbjct: 147 PGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPN 206
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIF 199
V K +++P I + +ELTL+G+ Q+Y V+E + K CL L+ + + Q++IF
Sbjct: 207 DVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIF 266
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
CN+ ++VE L K+ + I++ + Q R+ + +FRSG R L+ +DL RGIDV
Sbjct: 267 CNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDV 326
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
Q V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED A+ +EK T+I+ +
Sbjct: 327 QQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEKFYSTQIEEL 386
Query: 320 PKVI 323
P I
Sbjct: 387 PSDI 390
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 112/295 (37%), Positives = 182/295 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + + +N++ GGT++RDD+ + +++ TPGR+ D
Sbjct: 95 LILAPTRELAQQIQKVVVAIGDFMNIECHACIGGTSVRDDMKALQDGPQVVVGTPGRVHD 154
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ D K+ VLDEAD++LS+ F + + +LP Q++L SAT P V
Sbjct: 155 MIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVT 214
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K ++DP I + +ELTL+G+ Q+Y V++ + K+ L+ L+ + I Q++IFCN+ ++
Sbjct: 215 TKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRK 274
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L K+T + +H M QA R+ + +FRSG R L+ +DL RGIDVQ V++V
Sbjct: 275 VDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLV 334
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGR GR+G G+AIN +T +D + IE+ T+I+ +P
Sbjct: 335 INYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMP 389
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 118/295 (40%), Positives = 180/295 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA+Q + + L H+NV+ GGT++ +DI ++ H++ TPGR+ D
Sbjct: 93 LILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGNDIKKLDYGQHVVSGTPGRVTD 152
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ + K+L+LDEAD+LL+Q FK + + LP Q+++ SAT P V
Sbjct: 153 MIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLPPGTQVVVVSATLPQDVLEMT 212
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K +P I + +ELTL+G+ QY+ V++ + K L L+ L I Q++IFCNS ++
Sbjct: 213 NKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRK 272
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L +K+ E + +H M Q R+ + DFR G R L+C+D++ RGIDVQ V++V
Sbjct: 273 VDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLV 332
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGRSGR+G G+AIN +T ED L IE+ T I +P
Sbjct: 333 INYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDEMP 387
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 115/295 (38%), Positives = 179/295 (60%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q + + L ++NV+ GGTN+ +DI ++ H++ TPGR+ D
Sbjct: 97 LVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNIGEDIRKLDYGQHVVSGTPGRVAD 156
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ H K+LVLDEAD+LL++ F+ + V LP Q+++ SAT P V +
Sbjct: 157 MIRRRHLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMT 216
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K + DP + + +ELTL+G+ QY+ V++ + K L L+ L I Q++IFCN+ ++
Sbjct: 217 TKFMTDPVRVLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRK 276
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L K+ E + +H M Q R+ + DFR G R L+ +D++ RGIDVQ V++V
Sbjct: 277 VDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLV 336
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGRSGR+G G+AIN +T +D L IE T+I +P
Sbjct: 337 INYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDIELYYSTQIDEMP 391
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 116/295 (39%), Positives = 180/295 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L + PTRELA+Q ++ + L +NV+ V GGTNL +DI ++ H++ TPGR+ D
Sbjct: 98 LCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFD 157
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++V K+LVLDEAD++L++ FK + V LP Q++L SAT P +
Sbjct: 158 MIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMT 217
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++IFCN+ ++
Sbjct: 218 SKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRK 277
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L +K+ E + +H M Q R+ + +FR+G R L+ +D++ RGIDVQ V++V
Sbjct: 278 VDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLV 337
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGRSGR+G G+AIN + +D L IE+ T+I +P
Sbjct: 338 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMP 392
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
Identities = 118/298 (39%), Positives = 176/298 (59%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LII PTRELA Q ++ + L ++L++K GGT + DDI + VH+++ TPGR+ +
Sbjct: 96 LIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKITDDIQALQSGVHVVVGTPGRVFE 155
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ + + N D +I LDEAD++LS+ FK + + LP Q+ L+SAT
Sbjct: 156 MLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRFLPKTIQVGLFSATMTDETLGIT 215
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
K +++P I + +ELTL+G+ Q+Y V E+ K L L+ L I QS+IFCN+ ++
Sbjct: 216 SKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEVLTDLYETLSITQSVIFCNTRRK 275
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L K+TE + H Q R+ + FRSG R L+ +DL RGIDVQ V++V
Sbjct: 276 VDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGATRVLITTDLLARGIDVQQVSLV 333
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVI 323
INFD P E Y+HRIGRSGR+G G+AIN IT +R + + + T I +P+ I
Sbjct: 334 INFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERGQIDELSRHYNTYIAEMPQDI 391
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 115/301 (38%), Positives = 181/301 (60%)
Query: 22 ITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIAT 81
+ S LI+ PTRELA Q ++ + L++ +N++V GG NL DD+ ++ VH++ T
Sbjct: 98 VRSPQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGGKNLSDDVKKLETGVHIVSGT 157
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPL 141
PGR+LD++ ++ H K+++LDEAD++LS F+ ++ V LP+ QI+L SAT
Sbjct: 158 PGRVLDMITRKSLPTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQ 217
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIF 199
V + EK + P I L +ELTL G+ Q++ V++ K L ++ L I Q++IF
Sbjct: 218 DVVSMTEKFMTKPVRILLKRDELTLDGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIF 277
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
CN+ ++V+ L +++ + + +H M Q R + FRSG R L+ +D+ RGIDV
Sbjct: 278 CNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDV 337
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
Q V++VIN+D P E Y+HRIGRSGR+G G+AIN + D L IE+ T+I +
Sbjct: 338 QQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEM 397
Query: 320 P 320
P
Sbjct: 398 P 398
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 108 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 167
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 168 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 227
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 228 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 287
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 288 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 347
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 348 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 407
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 408 YNTSIEEMP 416
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 117/309 (37%), Positives = 186/309 (60%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETF 390
Query: 312 LGTEIKSIP 320
T I+ +P
Sbjct: 391 YNTSIEEMP 399
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 116/295 (39%), Positives = 176/295 (59%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ P+RELA QT + + H N++ GG ++ +DI ++ + VH + TPGR+ D
Sbjct: 94 LVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVHAVSGTPGRVYD 153
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ + K+LVLDE+D++LS+ K + V LPH+ Q+ L SAT P +
Sbjct: 154 MIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLISATLPQEILEMT 213
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
EK + DP I + +ELTL+G+ QYY V +E K L L+ +L INQ+IIFCN+ Q+
Sbjct: 214 EKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQK 273
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L +K+ + +H Q R+ + + FRS R L+ SD++ RGIDVQ V+ V
Sbjct: 274 VDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHV 333
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGR+GR+G G+AIN + D L IE+ GT+I+ +P
Sbjct: 334 INYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMP 388
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 113/301 (37%), Positives = 184/301 (61%)
Query: 25 KAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV-HLIIAT 81
KAT +++ PTRELA Q ++ + L ++ GGTN+R+D+ ++ V H+++ T
Sbjct: 99 KATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDVQKLQADVPHIVVGT 158
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPL 141
PGR+ D+++++ + + K+ LDEAD++LS+ FK + + L + Q++L SAT P
Sbjct: 159 PGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLATDTQVILLSATMPQ 218
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIF 199
V K ++DP I + EELTL+G+ Q+Y V++ + K+ L L+ L I Q++IF
Sbjct: 219 EVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIF 278
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +DL RGIDV
Sbjct: 279 INTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLARGIDV 338
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
Q V++VIN+D P E Y+HRIGR GR+G G+AIN+IT +D+ L IE T ++ +
Sbjct: 339 QQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTLRDIETFYNTTVEEM 398
Query: 320 P 320
P
Sbjct: 399 P 399
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 121/310 (39%), Positives = 183/310 (59%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L +L + + +A L++ PTRELA Q ++ L +L VK GGT++R+D R+ Q
Sbjct: 100 LQQLDISLVQCQA-LVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVRED-QRVLQ 157
Query: 74 K-VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH+++ TPGR+ DL+ +Q D K+ VLDEAD++LS+ FK + + +LP + Q+
Sbjct: 158 SGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQV 217
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSK 190
++SAT P K + P I + +ELTL+G+ Q+Y V +E K+ L L+
Sbjct: 218 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYET 277
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
L I QS+IF N+ ++V+ L K+ + H M Q R+ + +FRSG R L+ +
Sbjct: 278 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 337
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
DL RGIDVQ V++VINFD P E YLHRIGRSGR+G G+AIN +T ED + I++
Sbjct: 338 DLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQR 397
Query: 311 ELGTEIKSIP 320
++ +P
Sbjct: 398 FYNVVVEELP 407
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 122/310 (39%), Positives = 184/310 (59%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L +L A + +A L++ PTRELA Q ++ L + VKV GGT++R+D RI Q
Sbjct: 98 LQQLDYALLQCQA-LVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVRED-QRILQ 155
Query: 74 K-VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH+++ TPGR+ D++ +Q D K+ VLDEAD++LS+ FK + + +LP + Q+
Sbjct: 156 AGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSK 190
++SAT P K + P I + +ELTL+G+ Q+Y V++ K+ L L+
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYET 275
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
L I QS+IF N+ ++V+ L K+ + H M Q R+ + +FRSG R L+ +
Sbjct: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
DL RGIDVQ V++VINFD P E YLHRIGRSGR+G G+AIN +T +D+ L I+K
Sbjct: 336 DLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQK 395
Query: 311 ELGTEIKSIP 320
++ +P
Sbjct: 396 FYNVVVEELP 405
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 113/302 (37%), Positives = 178/302 (58%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA Q ++ + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 98 QVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 157
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q+ L SAT P
Sbjct: 158 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLP 217
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 218 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 277
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 278 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 337
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 338 VSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 397
Query: 319 IP 320
+P
Sbjct: 398 MP 399
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 104 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 163
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 164 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 223
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 224 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 283
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 284 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 343
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 344 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 403
Query: 319 IP 320
+P
Sbjct: 404 MP 405
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 113/302 (37%), Positives = 179/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + L ++NV+ GGTN+ +DI ++ H++
Sbjct: 103 QVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAG 162
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 222
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 223 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 282
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 283 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 342
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 343 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402
Query: 319 IP 320
+P
Sbjct: 403 MP 404
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 120/295 (40%), Positives = 179/295 (60%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L +L + I +A L++ PTRELA Q ++ L +L VKV GGT++R+D RI Q
Sbjct: 98 LQQLDFSLIQCQA-LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILQ 155
Query: 74 K-VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
VH+++ TPGR+ D++ +Q D+ K+ VLDEAD++LS+ FK + + +LP + Q+
Sbjct: 156 AGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSK 190
++SAT P K + P I + +ELTL+G+ Q+Y V++ + K+ L L+
Sbjct: 216 GVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYET 275
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
L I QS+IF N+ ++V+ L K+ + H M Q R+ + +FRSG R L+ +
Sbjct: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYAL 305
DL RGIDVQ V++VINFD P E YLHRIGRSGR+G G+AIN +T +D L
Sbjct: 336 DLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 113/302 (37%), Positives = 180/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q ++ + L ++NV+ GGTNL +DI ++ H++
Sbjct: 91 QVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 150
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK L + LP Q++L SAT P
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V +E K L L+ L I Q+++
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVL 270
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L K+ E + +H M Q R+ V +FR+G R L+ +D++ RG+D
Sbjct: 271 FCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V++VIN+D P E Y+HRIGRSGR+G G+AIN + +D L IE+ T+I
Sbjct: 331 VPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDE 390
Query: 319 IP 320
+P
Sbjct: 391 MP 392
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 113/302 (37%), Positives = 180/302 (59%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q ++ + L ++NV+ GGTNL +DI ++ H++
Sbjct: 91 QVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQHVVSG 150
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGR+ D++ ++ K+LVLDEAD++L++ FK L + LP Q++L SAT P
Sbjct: 151 TPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V +E K L L+ L I Q+++
Sbjct: 211 HEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVL 270
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L K+ E + +H M Q R+ V +FR+G R L+ +D++ RG+D
Sbjct: 271 FCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLD 330
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V++VIN+D P E Y+HRIGRSGR+G G+AIN + +D L IE+ T+I
Sbjct: 331 VPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVRILRDIEQYYSTQIDE 390
Query: 319 IP 320
+P
Sbjct: 391 MP 392
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 554 (200.1 bits), Expect = 1.5e-53, P = 1.5e-53
Identities = 108/296 (36%), Positives = 182/296 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV-HLIIATPGRIL 86
L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ + H+++ TPGR+
Sbjct: 127 LVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEVQKLQAEAPHIVVGTPGRVY 186
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
D+++++ + + K+ VLDEAD++LS+ FK + + L Q++L SAT P V +
Sbjct: 187 DMLNRKFLSSKYIKMFVLDEADEMLSRGFKDQIYEIFQKLSTSIQVVLLSATMPAEVLDV 246
Query: 147 MEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQ 204
K +++P I + EELTL+G+ Q+Y V++ + K+ L L+ L I Q++IF N+ +
Sbjct: 247 TTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLYETLTITQAVIFINTRR 306
Query: 205 RVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNV 264
+V+ L +K+ + +H M Q R+ + +FRSG R L+ +DL RGIDVQ V++
Sbjct: 307 KVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLARGIDVQQVSL 366
Query: 265 VINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
VIN+D P E Y+HRIGR GR+G G+AIN++T +D+ L IE T ++ +P
Sbjct: 367 VINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLRDIETFYNTTVEEMP 422
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 114/309 (36%), Positives = 185/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P+ V +K +++P I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 391
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 392 YNTTVEEMP 400
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/309 (37%), Positives = 184/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 93 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 152
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 153 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 212
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 213 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 272
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 273 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 332
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 333 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 392
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 393 YNTTVEEMP 401
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 115/298 (38%), Positives = 182/298 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK-VHLIIATPGRIL 86
LI+ PTRELA Q Q+ L ++NV TGG L+DD+ ++ + + TPGR+L
Sbjct: 95 LILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVL 154
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQD--FKGMLDHVISILPHERQILLYSATFPLTVK 144
D++ KQ+ + ++LVLDEAD+LLS+ FK + + + LP Q+++ SAT +
Sbjct: 155 DMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDIL 214
Query: 145 NFMEKHLKDPYEINLM-EELTLKGVTQYYAFV-QERQKVHCLNTLFSKLQINQSIIFCNS 202
K + DP +I + +E++L+G+ QY V +E K L ++ L I Q +IFCN+
Sbjct: 215 EVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNT 274
Query: 203 TQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAV 262
++V+ L++++ + + +H M Q R++V +DFR+G R L+ +D++ RGIDVQ V
Sbjct: 275 KKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQV 334
Query: 263 NVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
++VIN+D P++ E Y+HRIGRSGR+G G+AIN IT D L IEK +I +P
Sbjct: 335 SLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLREIEKFYSIKINPMP 392
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 115/308 (37%), Positives = 183/308 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L ++ KAT L++ PTRELA Q ++ + L ++ GGTN+R ++ ++ +
Sbjct: 91 LQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQME 150
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+ D+++++ + + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 151 APHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVV 210
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQ 192
L SAT P V +K ++DP I L TL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 211 LLSATMPSDVLEVTKKFMRDPIRIXL----TLEGIRQFYINVEREEWKLDTLCDLYETLT 266
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +DL
Sbjct: 267 ITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDL 326
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN++T ED+ L IE
Sbjct: 327 LARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFY 386
Query: 313 GTEIKSIP 320
T I+ +P
Sbjct: 387 NTSIEEMP 394
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 110/295 (37%), Positives = 180/295 (61%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA QT + + H N++ GG ++ +DI ++ VH++ TPGR+ D
Sbjct: 107 LILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCD 166
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ K+L+LDE+D++LS+ FK + V LP + Q+ L SAT P +
Sbjct: 167 MIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSATLPHEILEMT 226
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K + +P +I + +ELTL+G+ Q++ V++ + K L L+ L I Q++IFCN+ ++
Sbjct: 227 SKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRK 286
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L++K+ + +H M Q R+ + ++FRSG R L+ +D++ RGIDVQ V++V
Sbjct: 287 VDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLV 346
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
IN+D P E Y+HRIGRSGR+G G+AIN + +D L IE+ T+I +P
Sbjct: 347 INYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMP 401
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 113/302 (37%), Positives = 181/302 (59%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
+I+ PTRELA QT ++C+ LA +++V + GG + DDI + VH+I TPGRI
Sbjct: 89 IILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNNGVHVISGTPGRIYH 148
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++ + + K LV+DEAD++L++ FK + + L QI+L SAT P V
Sbjct: 149 MLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQIILSSATLPQEVLEIT 208
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K + P +I + +ELTL+G+ Q++ +++ Q K L L+ L I Q+++FCN+ +
Sbjct: 209 NKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMK 268
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L KK+ E + +HA M+Q+ R+ + FR R L+ +D++ RG+DVQ V++V
Sbjct: 269 VDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLV 328
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDP 325
+N+D P E+Y+HRIGRSGR+G G+AIN + +D L IE+ T+I +P I
Sbjct: 329 VNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNITE 388
Query: 326 AL 327
L
Sbjct: 389 LL 390
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 113/302 (37%), Positives = 181/302 (59%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
+I+ PTRELA QT ++C+ LA +++V + GG + DDI + VH+I TPGRI
Sbjct: 89 IILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALNNGVHVISGTPGRIYH 148
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++ + + K LV+DEAD++L++ FK + + L QI+L SAT P V
Sbjct: 149 MLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQIILSSATLPQEVLEIT 208
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQR 205
K + P +I + +ELTL+G+ Q++ +++ Q K L L+ L I Q+++FCN+ +
Sbjct: 209 NKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYESLTITQAVVFCNTQMK 268
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L KK+ E + +HA M+Q+ R+ + FR R L+ +D++ RG+DVQ V++V
Sbjct: 269 VDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLISTDIWGRGLDVQEVSLV 328
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDP 325
+N+D P E+Y+HRIGRSGR+G G+AIN + +D L IE+ T+I +P I
Sbjct: 329 VNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNITE 388
Query: 326 AL 327
L
Sbjct: 389 LL 390
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 114/309 (36%), Positives = 183/309 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 96 LQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEMQKLQAE 155
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 156 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVV 215
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V K +++P I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 216 LLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 275
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 276 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTD 335
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
L RGIDVQ V++VIN+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE
Sbjct: 336 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETF 395
Query: 312 LGTEIKSIP 320
T ++ +P
Sbjct: 396 YNTTVEEMP 404
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 113/299 (37%), Positives = 176/299 (58%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA+Q + L ++N+ GG N+ +D+ ++ Q ++ TPGR++D
Sbjct: 98 LILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQQGQQIVSGTPGRVID 157
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ ++ + K+L+LDEAD+L ++ FK + + LP Q+++ SAT P V
Sbjct: 158 VIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQVVVVSATLPREVLEMT 217
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
K DP +I + +E++L G+ QYY + E K L L+ L I Q++IFCN+ +
Sbjct: 218 SKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTLCDLYDNLTITQAVIFCNTKLK 277
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V LA ++ + + +H M Q R+ + +DFR G R L+ +D++ RGIDVQ V++V
Sbjct: 278 VNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWARGIDVQQVSLV 337
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVID 324
IN+D P E Y+HRIGRSGR+G G AINLIT +D L EK T+IK +P I+
Sbjct: 338 INYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYSTKIKEMPMNIN 396
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 107/294 (36%), Positives = 175/294 (59%)
Query: 33 TREL---ALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV-HLIIATPGRILDL 88
+REL L+ ++ + L ++ GGTN+R+++ ++ + H+++ TPGR+ D+
Sbjct: 12 SRELLFPVLKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 89 MDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFME 148
++++ + K+ VLDEAD++LS+ FK + + L Q++L SAT P V +
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 149 KHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L I Q++IF N+ ++V
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ L +K+ + +H M Q R+ + +FRSG R L+ +DL RGIDVQ V++VI
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 251
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
N+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE T ++ +P
Sbjct: 252 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMP 305
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 107/294 (36%), Positives = 175/294 (59%)
Query: 33 TREL---ALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV-HLIIATPGRILDL 88
+REL A + ++ + L ++ GGTN+R+++ ++ + H+++ TPGR+ D+
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 89 MDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFME 148
++++ + K+ VLDEAD++LS+ FK + + L Q++L SAT P V +
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 149 KHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L I Q++IF N+ ++V
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ L +K+ + +H M Q R+ + +FRSG R L+ +DL RGIDVQ V++VI
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 251
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
N+D P E Y+HRIGR GR+G G+AIN +T ED+ L IE T ++ +P
Sbjct: 252 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMP 305
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 108/311 (34%), Positives = 183/311 (58%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q + + +L + KV V GG N++ D+++ + H+++ TP
Sbjct: 116 SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLK-NECPHIVVGTP 174
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLL-SQDFKGMLDHVISILPHERQILLYSATFPL 141
GR+L L ++ ++ + + +LDE DK+L S D + + + + PH++Q++++SAT
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ +K ++DP EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF
Sbjct: 235 EIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIF 294
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S R L K + E + IH+ M+Q R + F+ G R LV +DL RGID+
Sbjct: 295 VKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDI 354
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLI-TYEDRYALHRIEKELGTEIKS 318
+ VN+VIN+D P A+TYLHR+GR+GR+G G+AI + + D L+++++ +IK
Sbjct: 355 ERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKE 414
Query: 319 IPKVIDPALYV 329
+P+ ID + Y+
Sbjct: 415 LPEQIDTSTYM 425
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 4 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 60
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 61 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 120
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 121 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 180
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 181 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 240
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 241 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 300
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 301 NDVQDRFEVNISELPDEIDISSYI 324
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 111/324 (34%), Positives = 188/324 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDD--IM 69
L +L P +T + +++++ TRELA Q S+ +K++ +VKV V GG +++ D ++
Sbjct: 111 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVL 168
Query: 70 RIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+ + H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 169 K-KESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 227
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 228 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 287
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 288 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRI 347
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 348 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTL 407
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P+ ID + Y+
Sbjct: 408 NDVQDRFEVNISELPEEIDISSYI 431
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 110/311 (35%), Positives = 178/311 (57%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQK--VHLIIATP 82
+ L++ TRELA Q S+ +K++ NVKV V GG +++ D + +K H+++ TP
Sbjct: 130 SVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEVLKKNCPHIVVGTP 188
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L + N+ H K +LDE DK+L Q D + + + + PHE+Q++++SAT
Sbjct: 189 GRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK 248
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP EI + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 249 EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF 308
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S QR LA+ + E + IH M Q R + F+ R LV ++LF RG+D+
Sbjct: 309 VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDI 368
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+ ++ I
Sbjct: 369 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE 428
Query: 319 IPKVIDPALYV 329
+P ID + Y+
Sbjct: 429 LPDEIDISSYI 439
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 112/324 (34%), Positives = 186/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ +VKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/301 (36%), Positives = 176/301 (58%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELALQ + +L K+L V+ + GG + I + Q V +I+ TPGRILD
Sbjct: 73 LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILD 132
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ ++ KI++LDEAD++L F ++ +++ L + +Q LL+SAT P +K +
Sbjct: 133 HIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTII 192
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCL-NTLFSKLQINQSIIFCNSTQR 205
+K L + L+ E T+ + Q Y + E +K+ L + L S+L I Q+I+FC + +R
Sbjct: 193 KKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI-QAIVFCRTKKR 251
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ + +++ GY +H M+Q R + F++G LV +D+ RG+D+ V+ V
Sbjct: 252 VDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHV 311
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS--IPKVI 323
INFD P+ E+Y+HRIGR+GR G G AI LI Y +R L IE+ + +K +P+ +
Sbjct: 312 INFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPV 371
Query: 324 D 324
D
Sbjct: 372 D 372
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 109/301 (36%), Positives = 176/301 (58%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELALQ + +L K+L V+ + GG + I + Q V +I+ TPGRILD
Sbjct: 73 LIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGVEVIVGTPGRILD 132
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ ++ KI++LDEAD++L F ++ +++ L + +Q LL+SAT P +K +
Sbjct: 133 HIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLFSATLPAPIKTII 192
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCL-NTLFSKLQINQSIIFCNSTQR 205
+K L + L+ E T+ + Q Y + E +K+ L + L S+L I Q+I+FC + +R
Sbjct: 193 KKFLGGYKTVKLVGREKTVPAIRQVYYELPETEKIEGLVSILNSELPI-QAIVFCRTKKR 251
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ + +++ GY +H M+Q R + F++G LV +D+ RG+D+ V+ V
Sbjct: 252 VDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAARGLDIPDVSHV 311
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS--IPKVI 323
INFD P+ E+Y+HRIGR+GR G G AI LI Y +R L IE+ + +K +P+ +
Sbjct: 312 INFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEAINKRLKREILPEPV 371
Query: 324 D 324
D
Sbjct: 372 D 372
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 111/324 (34%), Positives = 188/324 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L ++ P + + T++++ TRELA Q S+ +K++ +VKV V GG +++ D +
Sbjct: 103 LQQIEP--VNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD-EEV 159
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L+ + N+ + K VLDE DK+L Q D + + + + PH
Sbjct: 160 LKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPH 219
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q +++SAT ++ K ++DP E+ + +E LTL G+ QYY +++ +K L
Sbjct: 220 EKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFD 279
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH MAQ R + F+ R
Sbjct: 280 LLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRI 339
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+V N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 340 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 399
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ + +P+ ID + Y+
Sbjct: 400 NDVQDRFEVNVAELPEEIDISTYI 423
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 111/324 (34%), Positives = 188/324 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L ++ P + + T++++ TRELA Q S+ +K++ +VKV V GG +++ D +
Sbjct: 151 LQQIEP--VNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD-EEV 207
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L+ + N+ + K VLDE DK+L Q D + + + + PH
Sbjct: 208 LKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPH 267
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q +++SAT ++ K ++DP E+ + +E LTL G+ QYY +++ +K L
Sbjct: 268 EKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFD 327
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH MAQ R + F+ R
Sbjct: 328 LLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRI 387
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+V N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 388 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 447
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ + +P+ ID + Y+
Sbjct: 448 NDVQDRFEVNVAELPEEIDISTYI 471
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 112/324 (34%), Positives = 185/324 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ +VKV V GG ++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ I +P ID + Y+
Sbjct: 401 NDVQDRFEVNISELPDEIDISSYI 424
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
Identities = 104/309 (33%), Positives = 177/309 (57%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
K ++ L++ PTRELA+Q S+ ++ V+V+ GG ++ I + + H+I+
Sbjct: 67 KNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVG 126
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
TPGRI+D +++ ++H +VLDEAD++L+ F ++ ++S +P ERQ LL+SAT P
Sbjct: 127 TPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMP 186
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ E+ + +P + + +E+T+ + QYY V E++K L L +I+F
Sbjct: 187 DPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKKKFDILTRLLDIQAPELAIVF 246
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
+ +RV+ LA+ + GY IH ++QA R V F+ G LV +D+ RG+D+
Sbjct: 247 GRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAARGLDI 306
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
V V NFD P+ E+Y+HRIGR+GR G G+A+ +T + LH IE+ +++ +
Sbjct: 307 SGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIERTTKRKMERM 366
Query: 320 -PKVIDPAL 327
P +D AL
Sbjct: 367 KPPTLDEAL 375
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 109/323 (33%), Positives = 187/323 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L ++ P + + T++++ TRELA Q S+ +K++ +VKV V GG +++ D +
Sbjct: 103 LQQIEP--VNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVL 160
Query: 72 YQKV-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHE 129
+ H+++ TPGRIL L+ + N+ + K VLDE DK+L Q D + + + + PHE
Sbjct: 161 KRNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHE 220
Query: 130 RQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTL 187
+Q +++SAT ++ K ++DP E+ + +E LTL G+ QYY +++ +K L L
Sbjct: 221 KQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDL 280
Query: 188 FSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNL 247
L+ NQ +IF S QR LA+ + E + IH MAQ R + F+ R L
Sbjct: 281 LDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRIL 340
Query: 248 VCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALH 306
V ++LF RG+D++ VN+V N+D P+ ++TYLHR+ R+GR+G G+A+ ++ E D L+
Sbjct: 341 VATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILN 400
Query: 307 RIEKELGTEIKSIPKVIDPALYV 329
++ + +P+ ID + Y+
Sbjct: 401 DVQDRFEVNVAELPEEIDISTYI 423
>UNIPROTKB|K9J6N8 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00660000095549 EMBL:AAEX03008212
Ensembl:ENSCAFT00000000797 Uniprot:K9J6N8
Length = 310
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 109/304 (35%), Positives = 174/304 (57%)
Query: 33 TRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQK--VHLIIATPGRILDLM 89
TRELA Q S+ +K++ NVKV V GG +++ D + +K H+++ TPGRIL L
Sbjct: 4 TRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEVLKKNCPHIVVGTPGRILALA 62
Query: 90 DKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPLTVKNFME 148
+ N+ H K +LDE DK+L Q D + + + + PHE+Q++++SAT ++
Sbjct: 63 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 122
Query: 149 KHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
K ++DP EI + +E LTL G+ QYY +++ +K L L L+ NQ +IF S QR
Sbjct: 123 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 182
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LA+ + E + IH M Q R + F+ R LV ++LF RG+D++ VN+
Sbjct: 183 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 242
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKSIPKVIDP 325
N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+ ++ I +P ID
Sbjct: 243 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 302
Query: 326 ALYV 329
+ Y+
Sbjct: 303 SSYI 306
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
Identities = 107/311 (34%), Positives = 181/311 (58%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q S+ +K++ VKV V GG +++ +D+++ H+++ TP
Sbjct: 114 SVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLK-KSCPHIVVGTP 172
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L+ + N+ + K VLDE DK+L Q D + + + + PHE+Q +++SAT
Sbjct: 173 GRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSK 232
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP E+ + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 233 EIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIF 292
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S QR L++ + E + IH MAQ R + F+ R LV ++LF RG+D+
Sbjct: 293 VKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDI 352
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+V N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+ ++ +
Sbjct: 353 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAE 412
Query: 319 IPKVIDPALYV 329
+P+ ID + Y+
Sbjct: 413 LPEEIDISTYI 423
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 107/311 (34%), Positives = 182/311 (58%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q S+ +K++ +VKV V GG +++ +D+++ H+++ TP
Sbjct: 114 SVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLK-KNCPHVVVGTP 172
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L+ + N+ + K VLDE DK+L Q D + + + + PHE+Q +++SAT
Sbjct: 173 GRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSK 232
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP E+ + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 233 EIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIF 292
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S QR LA+ + E + IH MAQ R + F+ R LV ++LF RG+D+
Sbjct: 293 VKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDI 352
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+V N+D P+ ++TYLHR+ R+GR+G G+A+ ++ E D L+ ++ +
Sbjct: 353 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAE 412
Query: 319 IPKVIDPALYV 329
+P+ ID + Y+
Sbjct: 413 LPEEIDISTYI 423
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 107/311 (34%), Positives = 182/311 (58%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q S+ +K++ +VKV V GG +++ +D+++ H+++ TP
Sbjct: 114 SVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLK-KNCPHVVVGTP 172
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L+ + N+ + K VLDE DK+L Q D + + + + PHE+Q +++SAT
Sbjct: 173 GRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSK 232
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP E+ + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 233 EIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIF 292
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S QR LA+ + E + IH MAQ R + F+ R LV ++LF RG+D+
Sbjct: 293 VKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDI 352
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+V N+D P+ ++TYLHR+ R+GR+G G+A+ ++ E D L+ ++ +
Sbjct: 353 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAE 412
Query: 319 IPKVIDPALYV 329
+P+ ID + Y+
Sbjct: 413 LPEEIDISTYI 423
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
Identities = 111/324 (34%), Positives = 188/324 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L ++ P + + T++++ TRELA Q S+ +K++ +VKV V GG +++ D +
Sbjct: 103 LQQIEP--VNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKD-EEV 159
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L+ + ++ + K VLDE DK+L Q D + + + + PH
Sbjct: 160 LKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPH 219
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q +++SAT ++ K ++DP E+ + +E LTL G+ QYY +++ +K L
Sbjct: 220 EKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFD 279
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ IIF S QR LA+ + E + IH MAQ R + F+ R
Sbjct: 280 LLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRI 339
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYAL 305
LV ++LF RG+D++ VN+V N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L
Sbjct: 340 LVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 399
Query: 306 HRIEKELGTEIKSIPKVIDPALYV 329
+ ++ + +P+ ID + Y+
Sbjct: 400 NDVQDRFEVNVAELPEEIDISTYI 423
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 328 (120.5 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 70/179 (39%), Positives = 105/179 (58%)
Query: 154 PYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAK 211
P EI + +E LTL G+ Q+Y + E +K LN L L NQ +IF S R L K
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNK 365
Query: 212 KITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVINFDFP 271
+ E + IH+ M+Q R + F+ G R LV +DL RGID++ VN+VIN+D P
Sbjct: 366 LLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMP 425
Query: 272 KMAETYLHRIGRSGRYGHLGIAINLI-TYEDRYALHRIEKELGTEIKSIPKVIDPALYV 329
A+TYLHR+GR+GR+G G+AI + + D L+++++ +IK +P+ ID + Y+
Sbjct: 426 DSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQIDTSTYM 484
Score = 181 (68.8 bits), Expect = 8.0e-47, Sum P(2) = 8.0e-47
Identities = 38/132 (28%), Positives = 78/132 (59%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q + + +L + KV V GG N++ D+++ + H+++ TP
Sbjct: 116 SALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLK-NECPHIVVGTP 174
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLL-SQDFKGMLDHVISILPHERQILLYSATFPL 141
GR+L L ++ ++ + + +LDE DK+L S D + + + + PH++Q++++SAT
Sbjct: 175 GRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSK 234
Query: 142 TVKNFMEKHLKD 153
++ +K ++D
Sbjct: 235 EIRPVCKKFMQD 246
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 110/322 (34%), Positives = 181/322 (56%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
L +L P+ + L++ TRELA Q S+ +K++ VKV V GG ++ D +
Sbjct: 100 LQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLK 159
Query: 73 QKV-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHER 130
H+++ TPGRIL L+ + N+ K VLDE DK+L Q D + + + PH +
Sbjct: 160 SGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGK 219
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLF 188
Q++++SAT ++ +K ++DP E+ + +E LTL G+ Q+Y ++E +K L L
Sbjct: 220 QVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELL 279
Query: 189 SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLV 248
L+ NQ +IF S QR L++ +TE + IH M Q R + F+ R LV
Sbjct: 280 DVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILV 339
Query: 249 CSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHR 307
++LF RG+D++ VN+V N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+
Sbjct: 340 ATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNE 399
Query: 308 IEKELGTEIKSIPKVIDPALYV 329
++ I +P+ ID + Y+
Sbjct: 400 VQDRFDVNISELPEEIDLSTYI 421
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 107/323 (33%), Positives = 185/323 (57%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P + + +++ + TRELA Q S+ +K+L VKV V GG ++ D R+
Sbjct: 100 LQQLEP--VDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERL 157
Query: 72 YQKV-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHE 129
H+++ TPGR+L L +D K VLDE DK++ D + + ++ + P +
Sbjct: 158 ANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQ 217
Query: 130 RQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTL 187
+Q++++SAT P ++ ++ ++DP E+ + +E LTL G+ Q+Y ++E +K L L
Sbjct: 218 KQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNL 277
Query: 188 FSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNL 247
L+ NQ +IF + +R E L + +TE + IH +MAQ R + F+ R L
Sbjct: 278 LDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRIL 337
Query: 248 VCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALH 306
V +DLF RG+D++ VN+V N+D P+ +++YLHR+ R+GR+G G+AI ++ E D L+
Sbjct: 338 VATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLN 397
Query: 307 RIEKELGTEIKSIPKVIDPALYV 329
++ I +P+ ID + Y+
Sbjct: 398 SVQDRFDISITELPEKIDVSTYI 420
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 108/299 (36%), Positives = 172/299 (57%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + + +K+LN++ +V GG ++ +M++ V +++ATPGR+LD
Sbjct: 79 LILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLD 138
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L + +D +ILVLDEAD++L F + V++ LP +RQ LL+SATF +K
Sbjct: 139 LEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALA 198
Query: 148 EKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
EK L +P EI + T VTQ+ FV +++K L+ + K Q ++F +
Sbjct: 199 EKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGA 258
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LA+++ + G IH +Q R R DF+SG R LV +D+ RG+D++ + V+
Sbjct: 259 NHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVV 318
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDP 325
N++ P + E Y+HRIGR+GR G A++L+ ++ L IEK L K IP++ P
Sbjct: 319 NYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLK---KEIPRIAIP 374
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 107/339 (31%), Positives = 189/339 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
+ K+ P +A ++I PTRELA+Q S+ ++ + KV+ GG ++ I + +
Sbjct: 62 VEKINPESPNIQA-IVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKK 120
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
++I+ TPGR+LD ++++ +++ +V+DEAD++L+ F ++ ++S +P E Q L
Sbjct: 121 NPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTL 180
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P +K E+ + +P + + +E+T+ + Q+Y VQER+K L L
Sbjct: 181 LFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERKKFDTLTRLLDIQS 240
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ LA+ + GY IH + QA R F+ G LV +D+
Sbjct: 241 PELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDV 300
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RG+D+ V V NFD P+ E+Y+HRIGR+GR G G+A+ IT ++ L IE+
Sbjct: 301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQTT 360
Query: 313 GTEIKSIPK-VIDPALYVARPEDMDRDNSTGASEENNVS 350
++ + + +D AL + ++R +T ENN++
Sbjct: 361 KRKMDRMKEPTLDEALEGQQQVTVERLRTT--ISENNLN 397
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 105/286 (36%), Positives = 164/286 (57%)
Query: 28 LIIVPTRELALQTSQICIELAKHLN--VKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRI 85
L++VPTRELA Q + A H N +K + GG ++ ++ + V +++ATPGR+
Sbjct: 89 LVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVNIQMLALRGGVDILVATPGRL 148
Query: 86 LDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKN 145
LDL+ +D K LVLDEAD++LS F L ++++ P ++Q LL+SATFP V
Sbjct: 149 LDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTPKKKQTLLFSATFPEQVTT 208
Query: 146 FMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
++ L +P EI L + + Q V + +K L L + Q Q++IF N+
Sbjct: 209 LTQELLNNPIEIQL-QSADASTLVQRVFTVNKGEKTAVLAHLIQQEQWRQALIFVNAKHH 267
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
E LA+K+ + G H Q+ R+RV F++G L+ +D+ RG+D++ + VV
Sbjct: 268 CEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATDIAARGLDIEKLPVV 327
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
INF+ P+ Y+HRIGRSGR G +G+AI+LI +ED + IEK+
Sbjct: 328 INFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDHEDYHHFSVIEKK 373
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 106/310 (34%), Positives = 179/310 (57%)
Query: 27 TLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRD--DIMRIYQKVHLIIATPG 83
TL++ TRELA Q K+L NVK V GG ++ D+++ +K ++II TPG
Sbjct: 119 TLVLCNTRELAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIK-EKKPNIIIGTPG 177
Query: 84 RILDLMDKQVANMDHCKILVLDEADKLL-SQDFKGMLDHVISILPHERQILLYSATFPLT 142
RIL L + ++ K +LDE D +L S D + + + ++P +Q++++SAT T
Sbjct: 178 RILQLASEGALSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATLSDT 237
Query: 143 VKNFMEKHLKDPYEINLME--ELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFC 200
++ +K + +P EI + + +LTL G+ QYY + E QK L L L NQ++IF
Sbjct: 238 IRPICKKFMNNPLEIYINDGSKLTLHGLQQYYVPITEEQKNKKLIELLDSLDFNQAVIFV 297
Query: 201 NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQ 260
S +R + L K + ++G+ IH + Q R + F++ R +V +++F RGID++
Sbjct: 298 KSVRRADALNKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIE 357
Query: 261 AVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
VNVVIN+D + A+TYLHR+GR+GR+G G+AI+ + ++ L +++ + IK +
Sbjct: 358 RVNVVINYDMAESADTYLHRVGRAGRFGTKGLAISFVPSKEDPVLEQVQSKFVVSIKELV 417
Query: 321 KVIDPALYVA 330
DP+ Y++
Sbjct: 418 ATPDPSTYMS 427
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 103/306 (33%), Positives = 170/306 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQ-TSQICIELAKHLNVKVMVTTGGTNLRDDIMRIY 72
L K+ P +A LI+ PTRELALQ T++I L + ++ V+ GG ++ + ++
Sbjct: 64 LEKIDPESSDVQA-LIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK 122
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+++ATPGR+LD + ++ ++ + +VLDEAD++L F ++ ++ P +Q
Sbjct: 123 GNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKL 191
+L+SAT P +K ++++ +P I + EE+T+ + Q +R K L + +
Sbjct: 183 MLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
Q ++IFC + R L + LGY C +H + QA R RV FR + L+ +D
Sbjct: 243 QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATD 302
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV V V N+D P+ E+Y+HRIGR+GR G G+AI + +D L IEK
Sbjct: 303 VAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKT 362
Query: 312 LGTEIK 317
LG I+
Sbjct: 363 LGAPIQ 368
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 103/306 (33%), Positives = 170/306 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQ-TSQICIELAKHLNVKVMVTTGGTNLRDDIMRIY 72
L K+ P +A LI+ PTRELALQ T++I L + ++ V+ GG ++ + ++
Sbjct: 64 LEKIDPESSDVQA-LIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKLK 122
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+++ATPGR+LD + ++ ++ + +VLDEAD++L F ++ ++ P +Q
Sbjct: 123 GNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQT 182
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKL 191
+L+SAT P +K ++++ +P I + EE+T+ + Q +R K L + +
Sbjct: 183 MLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIETTDRAKPDALRFVMDRD 242
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
Q ++IFC + R L + LGY C +H + QA R RV FR + L+ +D
Sbjct: 243 QPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIATD 302
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV V V N+D P+ E+Y+HRIGR+GR G G+AI + +D L IEK
Sbjct: 303 VAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIEKT 362
Query: 312 LGTEIK 317
LG I+
Sbjct: 363 LGAPIQ 368
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 109/314 (34%), Positives = 179/314 (57%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQKV---HLIIAT 81
+ L++ TRELA Q +K++ ++K V GGT ++ D + K H+I+ T
Sbjct: 122 SVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGT 181
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFP 140
PGR+ L+ + + +I VLDE DK+L Q D + + + P ++Q++++SAT
Sbjct: 182 PGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLS 241
Query: 141 LTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
+K +K +++P E + E+ LTL G+ QY+ ++E++K LN L LQ NQ II
Sbjct: 242 DEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVII 301
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F ST R L K + E + +H+ ++Q R R + +F+ R V +D+F RGID
Sbjct: 302 FVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGID 361
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIK 317
++ +N+ IN+D P A++YLHR+GR+GR+G G+A++ +T + D+ L IEK I
Sbjct: 362 IERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIP 421
Query: 318 SIPKV-IDPALYVA 330
PK ID + Y+A
Sbjct: 422 EFPKDGIDASTYMA 435
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 112/317 (35%), Positives = 172/317 (54%)
Query: 14 LNKLTPAKITSKAT-----LIIVPTRELALQTSQICIELAKHLN--VKVMVTTGGTNLRD 66
L +L+ AK K+ L++VPTRELA Q + + A H N +K++ GG ++
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 67 DIMRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISIL 126
+ + +++ATPGR+LDL+ + VLDEAD++LS F L+ V++ L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 186
P ++Q LL+SATFP V+ K L P E +L E + Q V QK L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQE-STIEQRVITVNREQKTALLAH 246
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L + Q +Q++IF ++ LA+K+++ G H AQ R RV F++G
Sbjct: 247 LIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISV 306
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ RGID+ + VVINFD P+ Y+HRIGRSGR G G+A+ LI++E+ +
Sbjct: 307 LIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHFG 366
Query: 307 RIEKELGTEIKSIPKVI 323
IEK+ +IK + + I
Sbjct: 367 VIEKK--NKIKLVREQI 381
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 112/317 (35%), Positives = 172/317 (54%)
Query: 14 LNKLTPAKITSKAT-----LIIVPTRELALQTSQICIELAKHLN--VKVMVTTGGTNLRD 66
L +L+ AK K+ L++VPTRELA Q + + A H N +K++ GG ++
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 67 DIMRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISIL 126
+ + +++ATPGR+LDL+ + VLDEAD++LS F L+ V++ L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 186
P ++Q LL+SATFP V+ K L P E +L E + Q V QK L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQE-STIEQRVITVNREQKTALLAH 246
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L + Q +Q++IF ++ LA+K+++ G H AQ R RV F++G
Sbjct: 247 LIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGEISV 306
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ RGID+ + VVINFD P+ Y+HRIGRSGR G G+A+ LI++E+ +
Sbjct: 307 LIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYHHFG 366
Query: 307 RIEKELGTEIKSIPKVI 323
IEK+ +IK + + I
Sbjct: 367 VIEKK--NKIKLVREQI 381
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 110/328 (33%), Positives = 180/328 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
L +L P A ++I RELA Q + +K++ +VK V GGT + D +
Sbjct: 121 LQQLDPVP-GEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLK 179
Query: 73 QK---VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
K H+++ATPGR+ L+ ++ ++ H K V+DE DK+L + D + + + P
Sbjct: 180 NKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPR 239
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
++Q++++SAT ++ + L++P EI + +E LTL G+ QYY ++ER+K L
Sbjct: 240 DKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQ 299
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHR---NRVFHDFRSGL 243
L L+ NQ IIF ST R L K + + +H M Q R + F DF +
Sbjct: 300 LLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRI 359
Query: 244 CRNLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDR 302
C V +D+F RGID++ +N+ IN+D A+ YLHR+GR+GR+G G+AI+ ++ ED
Sbjct: 360 C---VSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDE 416
Query: 303 YALHRIEKELGTEIKSIPKV-IDPALYV 329
L +I++ +I P+ IDP+ Y+
Sbjct: 417 EVLAKIQERFDVKIAEFPEEGIDPSTYL 444
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 106/339 (31%), Positives = 184/339 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
+ K+ P +A ++I PTRELA+Q S+ ++ + +V+ GG ++ I + +
Sbjct: 62 VEKINPESPNIQA-IVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKK 120
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGR+LD ++++ + +VLDEAD++L+ F ++ ++S +P E Q L
Sbjct: 121 NPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTL 180
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P +K E+ + +P + + +E+T+ + Q+Y V ER+K L L
Sbjct: 181 LFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERKKFDTLTRLLDIQS 240
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L + + GY IH + QA R F+ G LV +D+
Sbjct: 241 PELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDV 300
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RG+D+ V V NFD P+ E+Y+HRIGR+GR G G+A+ IT ++ L IE+
Sbjct: 301 AARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTT 360
Query: 313 GTEIKSIPK-VIDPALYVARPEDMDRDNSTGASEENNVS 350
++ + +D A+ + +DR + EENN++
Sbjct: 361 KRKMDRMKAPTLDEAIEGQQQVTVDRIRTI--IEENNLN 397
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 100/298 (33%), Positives = 170/298 (57%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+K+ K S ++I PTRELA+Q + ++ KH V+++ GG ++ I + +
Sbjct: 61 LDKVDTHK-ESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKK 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+I+ TPGRILD ++++ + + + +VLDEAD++L+ F ++ +++ +P Q L
Sbjct: 120 HPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ E+ + +P I + +E+T+ + Q+Y VQE++K L L
Sbjct: 180 LFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKKKFDVLTRLLDIQS 239
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+I+F + +RV+ L++ + GY IH + QA R V F+ G LV +D+
Sbjct: 240 PELAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDV 299
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+D+ V V NFD P+ E+Y+HRIGR+GR G GIA+ +T + L IE+
Sbjct: 300 AARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIER 357
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 107/315 (33%), Positives = 175/315 (55%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQKV---HLIIAT 81
+ L++ TRELA Q +K+L +V+ V GG N++ D+ K H+++AT
Sbjct: 121 SVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQDMEAFKDKSKSPHIVVAT 180
Query: 82 PGRILDLMDKQVANMDHCKILVLDEADKLL-SQDFKGMLDHVISILPHERQILLYSATFP 140
PGR+ L+ +++ ++ K VLDE DKLL S D + + V P ++Q++++SAT
Sbjct: 181 PGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVFRATPPQKQVMMFSATLS 240
Query: 141 LTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
++ +K +++P EI + +E LTL G+ Q+Y ++E+ K +N L L+ NQ +I
Sbjct: 241 NEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLEEKAKNRKINDLLDSLEFNQVVI 300
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHR---NRVFHDFRSGLCRNLVCSDLFTR 255
F S R L + + E + IH + Q R + F DF +C V +D+F R
Sbjct: 301 FVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFKDFDKRIC---VATDVFGR 357
Query: 256 GIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGT 314
GID++ VN+VIN+D P ++YLHR+GR+GR+G G+AI + E D L +I++
Sbjct: 358 GIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSEEDSQILDKIQERFEV 417
Query: 315 EIKSIPKVIDPALYV 329
I +P ID Y+
Sbjct: 418 NITELPDEIDVGSYM 432
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 103/303 (33%), Positives = 171/303 (56%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRD-DIMRIYQKVHLII 79
++ LI+ PTRELA+Q ++ + + +K + G+ ++ D+ ++ I
Sbjct: 105 QVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVDLPAGHEVARCIS 164
Query: 80 ATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATF 139
++L ++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT
Sbjct: 165 GIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATL 224
Query: 140 PLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSI 197
P + K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++
Sbjct: 225 PHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAV 284
Query: 198 IFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGI 257
IFCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+
Sbjct: 285 IFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGL 344
Query: 258 DVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIK 317
DV V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 345 DVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQID 404
Query: 318 SIP 320
+P
Sbjct: 405 EMP 407
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 100/299 (33%), Positives = 171/299 (57%)
Query: 27 TLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
TL++ PTRELA Q ++ L + VK V GG ++ + + +K H++IATPGR++
Sbjct: 150 TLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLI 209
Query: 87 DLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKN 145
D M+ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R+ L+SAT V+
Sbjct: 210 DHMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQK 269
Query: 146 FMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFC---N 201
L+DP + ++ + T+ + Q+Y F+ + K L ++ ++L N ++FC N
Sbjct: 270 LQRAALQDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLVSILNELAGNSFMVFCGTCN 329
Query: 202 STQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQA 261
+TQRV LL + LG +H +M+Q R + F+S L+ +D+ +RG+D+
Sbjct: 330 NTQRVALLLRN---LGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPH 386
Query: 262 VNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
V+ VINFD P ++ Y+HR+GR+ R G G +I +T D RIE +G ++ + P
Sbjct: 387 VDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEALIGKKLPAFP 445
>WB|WBGene00012059 [details] [associations]
symbol:T26G10.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0006915
GO:GO:0002119 GO:GO:0010171 GO:GO:0003723 GO:GO:0040035
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 KO:K14777
OMA:IFIPSKF EMBL:Z29115 PIR:S40731 RefSeq:NP_499069.1
ProteinModelPortal:P34580 SMR:P34580 STRING:P34580 PaxDb:P34580
EnsemblMetazoa:T26G10.1 GeneID:176321 KEGG:cel:CELE_T26G10.1
UCSC:T26G10.1 CTD:176321 WormBase:T26G10.1 InParanoid:P34580
NextBio:892086 Uniprot:P34580
Length = 489
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 97/291 (33%), Positives = 163/291 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q L + + V GG ++ M + ++ H+I+ATPGR++D
Sbjct: 116 LVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRLVD 175
Query: 88 LMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
++ N+ K L++DEAD++L+ DF+ LD ++ ++P ER+ L+SAT V
Sbjct: 176 HLENTKGFNLKALKFLIMDEADRILNMDFEVELDKILKVIPRERRTYLFSATMTKKVSKL 235
Query: 147 MEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
L+DP +++ T+ + Q+Y FV + K L L ++ N +I+FC +
Sbjct: 236 ERASLRDPARVSVSSRYKTVDNLKQHYIFVPNKYKETYLVYLLNEHAGNSAIVFCATCAT 295
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
+A + +LG +H +M+Q R + F+S LVC+D+ RG+D+ V++V
Sbjct: 296 TMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILVCTDVAARGLDIPHVDMV 355
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI 316
IN+D P ++ Y+HR+GR+ R G GIAI ++T D A +IE LG ++
Sbjct: 356 INYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYDVEAYQKIEANLGKKL 406
>UNIPROTKB|B4DP52 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CH471081
GO:GO:0003676 EMBL:AL662847 EMBL:AL662801 EMBL:CR753892
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CR942185
EMBL:AK298194 IPI:IPI00792043 SMR:B4DP52 STRING:B4DP52
Ensembl:ENST00000415382 Ensembl:ENST00000548499
Ensembl:ENST00000548770 Ensembl:ENST00000549326
Ensembl:ENST00000549433 Ensembl:ENST00000551056
Ensembl:ENST00000552079 UCSC:uc011dnn.2 Uniprot:B4DP52
Length = 350
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 107/311 (34%), Positives = 171/311 (54%)
Query: 32 PTRELALQTS---QICI----ELAKHLNVKVMVTTGGTNLRDDIMRIYQK--VHLIIATP 82
P+ LA TS Q C +A + KV V GG +++ D + +K H+++ TP
Sbjct: 37 PSTALAFVTSCSSQSCSGPLSTVALSIRQKVAVFFGGLSIKKD-EEVLKKNCPHIVVGTP 95
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L + N+ H K +LDE DK+L Q D + + + + PHE+Q++++SAT
Sbjct: 96 GRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSK 155
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP EI + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 156 EIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIF 215
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S QR LA+ + E + IH M Q R + F+ R LV ++LF RG+D+
Sbjct: 216 VKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDI 275
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+ N+D P+ ++TYLHR+ R+GR+G G+AI ++ E D L+ ++ I
Sbjct: 276 ERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE 335
Query: 319 IPKVIDPALYV 329
+P ID + Y+
Sbjct: 336 LPDEIDISSYI 346
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 101/311 (32%), Positives = 176/311 (56%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLR--DDIMRIYQKVHLIIATP 82
+ L++ TRELA Q S+ +K+++ VK GG +++ +D+++ H+++ TP
Sbjct: 114 SVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKDEDVLK-KNCPHIVVGTP 172
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRIL L + + + K VLDE DK+L Q D + + + + PHE+Q +++SAT
Sbjct: 173 GRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSK 232
Query: 142 TVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIF 199
++ K ++DP E+ + +E LTL G+ QYY +++ +K L L L+ NQ +IF
Sbjct: 233 EIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIF 292
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
S R L++ + E + IH M Q R + F+ R LV ++LF RG+D+
Sbjct: 293 VKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDI 352
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALHRIEKELGTEIKS 318
+ VN+V N+D P+ ++TYLHR+ R+GR+G G+A+ ++ E D L+ ++ +
Sbjct: 353 ERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVIFVSDETDAKILNDVQDRFEVNVAE 412
Query: 319 IPKVIDPALYV 329
+P+ ID + Y+
Sbjct: 413 LPEEIDISTYI 423
>UNIPROTKB|Q9H0S4 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006915 "apoptotic process" evidence=IDA]
[GO:0008380 "RNA splicing" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 GO:GO:0003723
EMBL:CH471094 UniGene:Hs.719938 GermOnline:ENSG00000178878
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF EMBL:AF078843 EMBL:AL136666 EMBL:AK054574 EMBL:AK127712
EMBL:AC007215 EMBL:BC009379 EMBL:BC068009 IPI:IPI00023972
IPI:IPI00397372 RefSeq:NP_057439.2 RefSeq:NP_957518.1 PDB:3BER
PDBsum:3BER ProteinModelPortal:Q9H0S4 SMR:Q9H0S4 IntAct:Q9H0S4
MINT:MINT-3056694 STRING:Q9H0S4 PhosphoSite:Q9H0S4 DMDM:52782792
SWISS-2DPAGE:Q9H0S4 PaxDb:Q9H0S4 PRIDE:Q9H0S4 DNASU:51202
Ensembl:ENST00000352940 Ensembl:ENST00000358007 GeneID:51202
KEGG:hsa:51202 UCSC:uc001rav.3 GeneCards:GC12P012966
HGNC:HGNC:18682 HPA:HPA014855 neXtProt:NX_Q9H0S4
PharmGKB:PA134918403 InParanoid:Q9H0S4 PhylomeDB:Q9H0S4
ChiTaRS:DDX47 EvolutionaryTrace:Q9H0S4 GenomeRNAi:51202
NextBio:54238 ArrayExpress:Q9H0S4 Bgee:Q9H0S4 CleanEx:HS_DDX47
Genevestigator:Q9H0S4 Uniprot:Q9H0S4
Length = 455
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 106/321 (33%), Positives = 179/321 (55%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 83 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 139
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H+IIATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 140 AKKPHIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILN 259
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 260 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D
Sbjct: 317 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 376
Query: 307 RIEKELGTEIKSIPKVIDPAL 327
RIE +G ++ P D +
Sbjct: 377 RIEHLIGKKLPGFPTQDDEVM 397
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 102/301 (33%), Positives = 164/301 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA+Q + + + +K G + + + QK H+++ TPGR+LD
Sbjct: 76 LVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLD 135
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++K +++ K LV+DEAD++L+ F ++ +I LP +R +L+SAT P V+
Sbjct: 136 HIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLS 195
Query: 148 EKHLKDPYEINLMEE-LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
++ P I + +T + V+E +K+ L + + + IIFC + + V
Sbjct: 196 RTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSCIIFCRTQENV 255
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ + +++ + Y C IH M Q R V DFR G R LV +D+ RGID+ + VI
Sbjct: 256 DHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVI 315
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLIT-YEDRYALHRIEKELGTEIKSIPKVIDP 325
N+D P E+Y+HR GR+GR G+ G AI IT YEDR+ L IE +G +IPK P
Sbjct: 316 NYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRF-LEEIEAYIGF---AIPKANAP 371
Query: 326 A 326
+
Sbjct: 372 S 372
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 102/301 (33%), Positives = 164/301 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA+Q + + + +K G + + + QK H+++ TPGR+LD
Sbjct: 76 LVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLD 135
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++K +++ K LV+DEAD++L+ F ++ +I LP +R +L+SAT P V+
Sbjct: 136 HIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLPEDVERLS 195
Query: 148 EKHLKDPYEINLMEE-LTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
++ P I + +T + V+E +K+ L + + + IIFC + + V
Sbjct: 196 RTYMNAPTHIEIKAAGITTDKIEHTLFEVREEEKLSLLKDVTTIENPDSCIIFCRTQENV 255
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ + +++ + Y C IH M Q R V DFR G R LV +D+ RGID+ + VI
Sbjct: 256 DHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVAARGIDIDNITHVI 315
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLIT-YEDRYALHRIEKELGTEIKSIPKVIDP 325
N+D P E+Y+HR GR+GR G+ G AI IT YEDR+ L IE +G +IPK P
Sbjct: 316 NYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRF-LEEIEAYIGF---AIPKANAP 371
Query: 326 A 326
+
Sbjct: 372 S 372
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 97/269 (36%), Positives = 159/269 (59%)
Query: 17 LTPAKITSKAT--LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
L +I K T L++ PTRELA Q ++ + L ++ GGTN+R+++ ++ +
Sbjct: 92 LQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAE 151
Query: 75 V-HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
H+++ TPGR+ D+++++ + K+ VLDEAD++LS+ FK + + L Q++
Sbjct: 152 APHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVV 211
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
L SAT P V +K ++DP I + EELTL+G+ Q+Y V+ E K+ L L+ L
Sbjct: 212 LLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
I Q++IF N+ ++V+ L +K+ + +H M Q R+ + +FRSG R L+ +D
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHR 280
L RGIDVQ V++VIN+D P E Y+HR
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHR 360
>UNIPROTKB|Q29S22 [details] [associations]
symbol:DDX47 "Probable ATP-dependent RNA helicase DDX47"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0006915 "apoptotic
process" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006915 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 EMBL:BC113207
IPI:IPI00688068 RefSeq:NP_001039850.1 UniGene:Bt.23258
ProteinModelPortal:Q29S22 SMR:Q29S22 PRIDE:Q29S22
Ensembl:ENSBTAT00000003058 GeneID:534721 KEGG:bta:534721 CTD:51202
HOVERGEN:HBG100512 InParanoid:Q29S22 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4TXBRS NextBio:20876515 Uniprot:Q29S22
Length = 457
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 105/321 (32%), Positives = 179/321 (55%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 85 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 141
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H++IATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 142 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 201
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 202 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 261
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 262 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 318
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D
Sbjct: 319 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 378
Query: 307 RIEKELGTEIKSIPKVIDPAL 327
RIE +G ++ P D +
Sbjct: 379 RIEHLIGKKLPVFPTQDDEVM 399
>UNIPROTKB|E2RN03 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF EMBL:AAEX03015248 Ensembl:ENSCAFT00000020996
NextBio:20853120 Uniprot:E2RN03
Length = 482
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 105/321 (32%), Positives = 179/321 (55%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 109 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLAL 165
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H++IATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 166 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 225
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 226 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 285
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 286 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 342
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D
Sbjct: 343 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 402
Query: 307 RIEKELGTEIKSIPKVIDPAL 327
RIE +G ++ P D +
Sbjct: 403 RIEHLIGKKLPVFPTQDDEVM 423
>MGI|MGI:1915005 [details] [associations]
symbol:Ddx47 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 47"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915005
GO:GO:0005524 GO:GO:0006915 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268802
GeneTree:ENSGT00670000098028 CTD:51202 HOVERGEN:HBG100512 KO:K14777
OMA:IFIPSKF OrthoDB:EOG4TXBRS ChiTaRS:DDX47 EMBL:AK010310
EMBL:AK076982 IPI:IPI00187240 RefSeq:NP_080636.2 UniGene:Mm.166524
ProteinModelPortal:Q9CWX9 SMR:Q9CWX9 IntAct:Q9CWX9
PhosphoSite:Q9CWX9 PaxDb:Q9CWX9 PRIDE:Q9CWX9
Ensembl:ENSMUST00000032326 GeneID:67755 KEGG:mmu:67755
InParanoid:Q9CWX9 NextBio:325481 Bgee:Q9CWX9 CleanEx:MM_DDX47
Genevestigator:Q9CWX9 GermOnline:ENSMUSG00000030204 Uniprot:Q9CWX9
Length = 455
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 104/314 (33%), Positives = 177/314 (56%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 83 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H++IATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 259
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 260 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D
Sbjct: 317 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 376
Query: 307 RIEKELGTEIKSIP 320
RIE +G ++ P
Sbjct: 377 RIEHLIGKKLPVFP 390
>UNIPROTKB|G3V727 [details] [associations]
symbol:Ddx47 "Protein Ddx47" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:CH473964
GeneTree:ENSGT00670000098028 CTD:51202 KO:K14777 OMA:IFIPSKF
RefSeq:NP_001015005.2 UniGene:Rn.73790 Ensembl:ENSRNOT00000011096
GeneID:297685 KEGG:rno:297685 RGD:1310437 NextBio:642541
Uniprot:G3V727
Length = 455
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 104/314 (33%), Positives = 177/314 (56%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 83 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 139
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H++IATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 140 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 199
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 200 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 259
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 260 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 316
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G G AI +T D
Sbjct: 317 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQYDVELFQ 376
Query: 307 RIEKELGTEIKSIP 320
RIE +G ++ P
Sbjct: 377 RIEHLIGKKLPVFP 390
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 107/305 (35%), Positives = 171/305 (56%)
Query: 33 TRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQK---VHLIIATPGRILDL 88
TRELA Q +K+L NV+ V GG ++ I +++++ H+II TPGRIL L
Sbjct: 152 TRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHI-KLFKEDNIPHIIIGTPGRILAL 210
Query: 89 MDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ ++ D + VLDE DK L + D + + + P ++Q++ +SAT +++
Sbjct: 211 IREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVC 270
Query: 148 EKHLKDPYEINLMEELTLK--GVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
+K L++P EI + +E LK G+ Q+Y +QE+ K L + L+ NQ IIF S R
Sbjct: 271 KKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTR 330
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
L K +TE + IH + Q R + F+ R LV +DLF RGID++ VN+V
Sbjct: 331 AITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIV 390
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLIT-YEDRYALHRIEKELGTEIKSIPKVID 324
IN+D P+ +++YLHR+GR+GR+G G+A+ ++ ED AL+ ++ I +P ID
Sbjct: 391 INYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAISEMPNKID 450
Query: 325 PALYV 329
Y+
Sbjct: 451 CNEYI 455
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 107/305 (35%), Positives = 171/305 (56%)
Query: 33 TRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQK---VHLIIATPGRILDL 88
TRELA Q +K+L NV+ V GG ++ I +++++ H+II TPGRIL L
Sbjct: 152 TRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHI-KLFKEDNIPHIIIGTPGRILAL 210
Query: 89 MDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ ++ D + VLDE DK L + D + + + P ++Q++ +SAT +++
Sbjct: 211 IREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMFFSATMAKEMRDVC 270
Query: 148 EKHLKDPYEINLMEELTLK--GVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
+K L++P EI + +E LK G+ Q+Y +QE+ K L + L+ NQ IIF S R
Sbjct: 271 KKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKDKTRKLIEILDALEFNQVIIFVKSVTR 330
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
L K +TE + IH + Q R + F+ R LV +DLF RGID++ VN+V
Sbjct: 331 AITLDKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVSTDLFGRGIDIERVNIV 390
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLIT-YEDRYALHRIEKELGTEIKSIPKVID 324
IN+D P+ +++YLHR+GR+GR+G G+A+ ++ ED AL+ ++ I +P ID
Sbjct: 391 INYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQTRFEVAISEMPNKID 450
Query: 325 PALYV 329
Y+
Sbjct: 451 CNEYI 455
>FB|FBgn0032919 [details] [associations]
symbol:CG9253 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
EMBL:AY121677 ProteinModelPortal:Q8MRB7 SMR:Q8MRB7 STRING:Q8MRB7
PaxDb:Q8MRB7 PRIDE:Q8MRB7 FlyBase:FBgn0032919 InParanoid:Q8MRB7
OrthoDB:EOG4V41Q7 ArrayExpress:Q8MRB7 Bgee:Q8MRB7 Uniprot:Q8MRB7
Length = 507
Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
Identities = 98/291 (33%), Positives = 164/291 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q + L + +K V GG ++ +++ +K H+IIATPGR++D
Sbjct: 133 LVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVD 192
Query: 88 LMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
++ N+ K LV+DEAD++L+ DF+ LD ++ +LP ER+ L+SAT VK
Sbjct: 193 HLENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKL 252
Query: 147 MEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
LKDP ++ + + T++ + Q Y F+ + K L + ++L N +IFC++
Sbjct: 253 QRASLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNN 312
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
A + LG +H +M+Q R + F++ L+ +D+ +RG+D+ V+VV
Sbjct: 313 TVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVV 372
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI 316
+NFD P ++ Y+HR+GR+ R G G AI L++ D RIE LG ++
Sbjct: 373 VNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGKQL 423
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 108/323 (33%), Positives = 172/323 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++VPTRELALQ Q ++ AK +++V + GG ++ + ++IATPGR+LD
Sbjct: 79 LVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLD 138
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ + N++ LV DEAD++L F + V+ +P +RQ LL+SAT ++ +F
Sbjct: 139 HLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFS 198
Query: 148 EKHLKDPYEINLME-ELTLKGVTQ-YYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
+ L+DP I + + T + Q YA +R K ++ L Q +IF + Q
Sbjct: 199 KNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLVRSKNWQQVLIFSRTKQG 257
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L ++ +LG H ++Q R +V +F+ GL + LV +D+ RG+D+ + V
Sbjct: 258 VDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYV 317
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS--IPKVI 323
INF+ P +AE Y+HRIGR+GR G G+AI L + ED L +E L + P
Sbjct: 318 INFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVETLLDKRLPQQWYPG-F 376
Query: 324 DPALYVARPEDMDRDNSTGASEE 346
+P PE R NS A ++
Sbjct: 377 EPDFNKMLPEP--RRNSKAAQKQ 397
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 108/323 (33%), Positives = 172/323 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++VPTRELALQ Q ++ AK +++V + GG ++ + ++IATPGR+LD
Sbjct: 79 LVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVFNAGIDVLIATPGRLLD 138
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ + N++ LV DEAD++L F + V+ +P +RQ LL+SAT ++ +F
Sbjct: 139 HLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQTLLFSATLDDSIFSFS 198
Query: 148 EKHLKDPYEINLME-ELTLKGVTQ-YYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
+ L+DP I + + T + Q YA +R K ++ L Q +IF + Q
Sbjct: 199 KNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLVRSKNWQQVLIFSRTKQG 257
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
V+ L ++ +LG H ++Q R +V +F+ GL + LV +D+ RG+D+ + V
Sbjct: 258 VDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLVATDVAARGLDIAELQYV 317
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS--IPKVI 323
INF+ P +AE Y+HRIGR+GR G G+AI L + ED L +E L + P
Sbjct: 318 INFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEVETLLDKRLPQQWYPG-F 376
Query: 324 DPALYVARPEDMDRDNSTGASEE 346
+P PE R NS A ++
Sbjct: 377 EPDFNKMLPEP--RRNSKAAQKQ 397
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 105/302 (34%), Positives = 166/302 (54%)
Query: 21 KITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
++ LI+ PTRELA+Q + + + V V T + R+ + L I
Sbjct: 104 QVRETQALILAPTRELAVQIQKSLLATGE---VPVPPPVKCTVSSWEQCRLACFLSLFIL 160
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFP 140
+D++ ++ K+LVLDEAD++L++ FK + V LP Q++L SAT P
Sbjct: 161 QSE--IDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLP 218
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQINQSII 198
+ K + DP I + +ELTL+G+ Q++ V+ E K L L+ L I Q++I
Sbjct: 219 HEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVI 278
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ ++V+ L +K+ E + +H M Q R + +FRSG R L+ +D++ RG+D
Sbjct: 279 FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLD 338
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
V V+++IN+D P E Y+HRIGRSGRYG G+AIN + +D L IE+ T+I
Sbjct: 339 VPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 398
Query: 319 IP 320
+P
Sbjct: 399 MP 400
>UNIPROTKB|Q5ZLB0 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268802 GeneTree:ENSGT00670000098028 CTD:51202
HOVERGEN:HBG100512 KO:K14777 OMA:IFIPSKF OrthoDB:EOG4TXBRS
EMBL:AADN02006011 EMBL:AADN02006010 EMBL:AJ719824 IPI:IPI00584081
RefSeq:NP_001007854.1 UniGene:Gga.13941 SMR:Q5ZLB0 STRING:Q5ZLB0
Ensembl:ENSGALT00000019245 GeneID:417959 KEGG:gga:417959
InParanoid:Q5ZLB0 NextBio:20821184 Uniprot:Q5ZLB0
Length = 453
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 100/298 (33%), Positives = 168/298 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q S+ L + V V GG + + + +K H+IIATPGR++D
Sbjct: 97 LVLTPTRELAFQISEQFEALGSSIGVHSAVIVGGIDSMSQSLALAKKPHIIIATPGRLVD 156
Query: 88 LMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R+ L+SAT V+
Sbjct: 157 HLENTKGFNLRALKFLVMDEADRILNMDFETEVDKILKVIPRDRKTFLFSATMTKQVQKL 216
Query: 147 MEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFC---NS 202
LK+P + + + T++ + QYY F+ + K L + ++L N +IFC N+
Sbjct: 217 QRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDSYLVYILNELAGNSFMIFCSTCNN 276
Query: 203 TQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAV 262
TQR LL + LG+ +H +M+Q R + F++ L+ +D+ +RG+D+ V
Sbjct: 277 TQRTALLLRN---LGFTAIPLHGQMSQNKRLGSLNKFKAKARSILLATDVASRGLDIPHV 333
Query: 263 NVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
+VVINFD P ++ Y+HR+GR+ R G G +I +T D RIE +G ++ + P
Sbjct: 334 DVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQYDVELFQRIEHLIGKKLPAFP 391
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 99/330 (30%), Positives = 176/330 (53%)
Query: 18 TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHL 77
+PA + L++ PTRELA Q + LN++V++ GG + I ++ + H+
Sbjct: 74 SPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLERGAHI 133
Query: 78 IIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSA 137
++ATPGR++DLM+++ ++D + L+LDEAD++L F L + +P +RQ L +SA
Sbjct: 134 LVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKRQTLFFSA 193
Query: 138 TFPLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQS 196
T P V++ L++P E+++ T G + Q FV++ +K L ++ +
Sbjct: 194 TMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPEKASLLIEKIRDPELRSA 253
Query: 197 IIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRG 256
I+F + + + K++ + IH +Q+ R + F++G LV +D+ RG
Sbjct: 254 IVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPILVATDIAARG 313
Query: 257 IDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI 316
I V A+ VIN+D P + E ++HRIGR+ R G+ G+AI+ + ++R L IEK G ++
Sbjct: 314 IHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLRAIEKLTGLKL 373
Query: 317 K----SIPKVIDPALYVARPEDMDRDNSTG 342
S+P +P +P+ N G
Sbjct: 374 APNGVSLPD--EPLRKPGKPQGNRSGNGGG 401
>TAIR|locus:2173517 [details] [associations]
symbol:AT5G60990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003723 EMBL:AB008269 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
EMBL:AK117799 EMBL:BT005375 EMBL:AY088068 EMBL:AJ010462
IPI:IPI00518446 PIR:T51342 RefSeq:NP_568931.1 UniGene:At.20430
ProteinModelPortal:Q8GY84 SMR:Q8GY84 STRING:Q8GY84 PaxDb:Q8GY84
PRIDE:Q8GY84 EnsemblPlants:AT5G60990.1 GeneID:836220
KEGG:ath:AT5G60990 GeneFarm:923 TAIR:At5g60990 InParanoid:Q8GY84
PhylomeDB:Q8GY84 ProtClustDB:CLSN2690059 Genevestigator:Q8GY84
GermOnline:AT5G60990 Uniprot:Q8GY84
Length = 456
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 100/302 (33%), Positives = 173/302 (57%)
Query: 29 IIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILDL 88
++ PTRELA+Q ++ L ++++ V GG + + + ++ H+I+ATPGR+ D
Sbjct: 94 VLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDH 153
Query: 89 M-DKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
M D + ++ K LVLDEAD+LL++DF+ L+ ++ +P ER+ L+SAT V+
Sbjct: 154 MSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQ 213
Query: 148 EKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
L++P +I + T+ + Q Y FV + K L + S++ + S+IF +
Sbjct: 214 RACLRNPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGT 273
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LA + LG+ I +M Q+ R + F++G C LVC+D+ +RG+D+ +V+VVI
Sbjct: 274 RFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVI 333
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLIT-YEDRYALHRIEKELGTEIKSIPKVIDP 325
N+D P ++ Y+HR+GR+ R G G+ I+L+ YE + + +IEK +G ++ P D
Sbjct: 334 NYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYI-QIEKLIGKKLPEYPAEEDE 392
Query: 326 AL 327
L
Sbjct: 393 VL 394
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 111/340 (32%), Positives = 185/340 (54%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV 75
K+ P ++ S +I+ PTRELALQ Q + AK+L + M GG + R+ + V
Sbjct: 68 KIRPKRVRS---IILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGV 124
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
L++ATPGR+LD+ ++ D +LVLDEAD++L F ++++I LP +RQ LL+
Sbjct: 125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLF 184
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQIN 194
SAT VK + + D EI + + + Q+ V + +K L+ L +
Sbjct: 185 SATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLIKENNWA 244
Query: 195 QSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFT 254
Q++IF + L ++ + G H+ +QA R ++ DF++G LV + + +
Sbjct: 245 QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVS 304
Query: 255 RGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG- 313
RGID+ A+ VIN+D P A+ Y+HRIGR+GR G+ G AI+ ++ +D L IE+ LG
Sbjct: 305 RGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGH 364
Query: 314 -TEIKSIPKVIDP--ALYVARPEDMDRDNSTGASEENNVS 350
E K+I + +P A+ ++ + + + S A + NN +
Sbjct: 365 IIERKNI-EGFEPKKAVPISILDFVPKSASRSAHKPNNTA 403
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 111/340 (32%), Positives = 185/340 (54%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKV 75
K+ P ++ S +I+ PTRELALQ Q + AK+L + M GG + R+ + V
Sbjct: 68 KIRPKRVRS---IILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIEGV 124
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
L++ATPGR+LD+ ++ D +LVLDEAD++L F ++++I LP +RQ LL+
Sbjct: 125 DLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNLLF 184
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQIN 194
SAT VK + + D EI + + + Q+ V + +K L+ L +
Sbjct: 185 SATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDRKSALLSHLIKENNWA 244
Query: 195 QSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFT 254
Q++IF + L ++ + G H+ +QA R ++ DF++G LV + + +
Sbjct: 245 QALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATGVVS 304
Query: 255 RGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG- 313
RGID+ A+ VIN+D P A+ Y+HRIGR+GR G+ G AI+ ++ +D L IE+ LG
Sbjct: 305 RGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERRLGH 364
Query: 314 -TEIKSIPKVIDP--ALYVARPEDMDRDNSTGASEENNVS 350
E K+I + +P A+ ++ + + + S A + NN +
Sbjct: 365 IIERKNI-EGFEPKKAVPISILDFVPKSASRSAHKPNNTA 403
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 449 (163.1 bits), Expect = 3.9e-42, P = 3.9e-42
Identities = 107/320 (33%), Positives = 177/320 (55%)
Query: 22 ITSKAT--LIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLI 78
+ S AT LI+ PTRE+A+Q + + K ++ V GGT L D +R+ +K H+
Sbjct: 85 LDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRL-KKCHIA 143
Query: 79 IATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSA 137
+ +PGRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SA
Sbjct: 144 VGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAVSA 203
Query: 138 TFPLTVKNFMEKHLKDPYEINLME-ELTLKGVTQYYAFVQER--------QKVHCLNTLF 188
T+P ++ N + ++++P + L + +L G+ QYY V +K L LF
Sbjct: 204 TYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQELF 263
Query: 189 SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLV 248
SK+ NQ+++F N R + LA+ +T G+ I M Q+ R + CR L+
Sbjct: 264 SKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRVLI 323
Query: 249 CSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHR 307
+DL +RGID + VN+VIN D P ETY+HRIGR+GR+G LG+++ E+ + +
Sbjct: 324 STDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMMMK 383
Query: 308 IEKELGTEIKSIPKVIDPAL 327
I ++ ++ +P+ I P +
Sbjct: 384 IAQKCNLQLLPLPEPIPPGM 403
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 101/301 (33%), Positives = 168/301 (55%)
Query: 16 KLTPAKITSKA--TLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
K T K+ +K LI+VPTRELA+Q + AK+L++ M GG + ++ R+
Sbjct: 68 KETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRLIW 127
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
V +++ATPGR+LD+ ++V + D +LVLDEAD++L F ++ +I LP RQ L
Sbjct: 128 GVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNL 187
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT V+ ++ + P EI++ + K + Q+ V + K L+ + +
Sbjct: 188 LFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALLSHIITTQN 247
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
Q++IF + L ++ + G IH+ AQ R ++ +DF+SG + LV + +
Sbjct: 248 WQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVATAI 307
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RG+D+ ++ VIN+D P + Y+HRIGR+GR G G AI+L++ ++ L IE L
Sbjct: 308 AARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFRELCAIESRL 367
Query: 313 G 313
G
Sbjct: 368 G 368
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 446 (162.1 bits), Expect = 4.0e-42, P = 4.0e-42
Identities = 94/292 (32%), Positives = 165/292 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
+++ PTRELA Q S+ + + V+ +V GG ++ + + +K H+++ TPGR++D
Sbjct: 118 VVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMD 177
Query: 88 LMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
++ ++ + K L++DEAD+LL DF ++D ++ I+PHER+ LL+SAT V+
Sbjct: 178 HLENTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKL 237
Query: 147 MEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
L P + + + T+ + Q Y F + K L L ++L N IIF +
Sbjct: 238 QRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVND 297
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
+ LA + LG+ +H +++Q++R + F+SG LV +D+ RG+D+ V+VV
Sbjct: 298 TQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVV 357
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIK 317
IN+D P ++ Y+HR+GR+ R G G +I L+T D RIE +G +++
Sbjct: 358 INYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQ 409
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 105/311 (33%), Positives = 167/311 (53%)
Query: 21 KITSK--ATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLI 78
K++S LI+ PTRELA Q S+ K+LN+ MV GG + I R+ Q V ++
Sbjct: 75 KVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARLRQGVDVL 134
Query: 79 IATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSAT 138
+ATPGR+LDL +++ ++ +LDEAD++L F + +++ LP +RQ LL+SAT
Sbjct: 135 VATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQNLLFSAT 194
Query: 139 FPLTVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSI 197
F ++ + + +P EI++ E T + VTQ+ V +++K L L + Q +
Sbjct: 195 FSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKPAVLTHLIKENNWQQVL 254
Query: 198 IFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGI 257
+F + L K + G IH +Q R + F+ G + LV +D+ RGI
Sbjct: 255 VFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVATDIAARGI 314
Query: 258 DVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI- 316
D+ + V+NFD P + E Y+HRIGR+ R G+ G A++L+ ++ L IE + I
Sbjct: 315 DIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADELDLLWGIEHVIQQHIE 374
Query: 317 -KSIPKVIDPA 326
K I K I PA
Sbjct: 375 RKVIEKFI-PA 384
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 98/293 (33%), Positives = 159/293 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ +K+LN V+ GG + ++ + +I+ATPGR+L+
Sbjct: 78 LILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLKRGADIIVATPGRLLE 137
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ ++ LVLDEAD++L F + ++ + +RQ LL+SATF VK
Sbjct: 138 HLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQNLLFSATFSSAVKKLA 197
Query: 148 EKHLKDPYEINL-MEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ + P I+ + T V+Q V++R+K L+ L K Q ++F +
Sbjct: 198 NEMMIKPQVISADKQNTTADTVSQVVYPVEQRRKRELLSELIGKKNWQQVLVFTATRDAA 257
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ L K++ G +H AQ R R +F SG R LV +++ RG+D+ ++ V+
Sbjct: 258 DTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVATEVAARGLDIPSLEYVV 317
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
NFD P +AE Y+HRIGR+GR G G+AI+ ++ E+ L IEK +G +I+ I
Sbjct: 318 NFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEKLIGQKIRRI 370
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 98/284 (34%), Positives = 155/284 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + +HL +K V GG + + R+ + +++ATPGR++D
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVATPGRLMD 136
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L ++ D +ILVLDEAD++L F + ++ +LP +RQ LL+SATF ++
Sbjct: 137 LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELA 196
Query: 148 EKHLKDPYEINLME-ELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ + +P EI++ T + V Q ++K L L + Q ++F +
Sbjct: 197 KGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGA 256
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LA + E G IH +Q R R DF++G R LV +D+ RGID+ + V+
Sbjct: 257 NRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVV 316
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
NF+ PK+AE Y+HRIGR+GR G +G AI+L++ + L IE+
Sbjct: 317 NFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 98/284 (34%), Positives = 155/284 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + +HL +K V GG + + R+ + +++ATPGR++D
Sbjct: 77 LILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVATPGRLMD 136
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L ++ D +ILVLDEAD++L F + ++ +LP +RQ LL+SATF ++
Sbjct: 137 LYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELA 196
Query: 148 EKHLKDPYEINLME-ELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ + +P EI++ T + V Q ++K L L + Q ++F +
Sbjct: 197 KGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFMRTKHGA 256
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LA + E G IH +Q R R DF++G R LV +D+ RGID+ + V+
Sbjct: 257 NRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQLPQVV 316
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
NF+ PK+AE Y+HRIGR+GR G +G AI+L++ + L IE+
Sbjct: 317 NFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIER 360
>CGD|CAL0004058 [details] [associations]
symbol:DBP8 species:5476 "Candida albicans" [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000447 "endonucleolytic cleavage in ITS1 to separate SSU-rRNA
from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480
"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004058 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AACQ01000165 EMBL:AACQ01000186
RefSeq:XP_711718.1 RefSeq:XP_712192.1 ProteinModelPortal:Q59PR3
STRING:Q59PR3 GeneID:3646191 GeneID:3646692 KEGG:cal:CaO19.13973
KEGG:cal:CaO19.6652 KO:K14778 Uniprot:Q59PR3
Length = 440
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 103/312 (33%), Positives = 170/312 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELALQ ++ L ++N+KV V GG + + + +K H +IATPGR+ D
Sbjct: 73 LILTPTRELALQIAEQFAALGANMNIKVAVVVGGEDFVQQTLALQRKPHFVIATPGRLAD 132
Query: 88 LM----DKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILP--HERQILLYSATFPL 141
+ ++ ++ + K LVLDEAD+LLS F L +LP +RQ LL++AT
Sbjct: 133 HILNSGEETISGLRRVKYLVLDEADRLLSNSFGSDLQRCFDVLPTSDKRQTLLFTATITD 192
Query: 142 TVKNFMEKHL---KDP---YEINLMEELTLKGVTQY-YAFVQERQKVHCLNTLFSKLQIN 194
V+ EK K P +E+ ++++ + Q Y FV K LN++ Q
Sbjct: 193 AVRALKEKPPTPGKPPVFMHEVETVDKVAIPSTLQISYVFVPSYVKEAYLNSILHLEQFK 252
Query: 195 QS--IIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
S +IF N T E+L + + +L + +H+ M Q+ R H F++G R L+ +D+
Sbjct: 253 DSTAVIFVNRTTTAEVLRRMLRKLDFRVASLHSEMPQSERTNSLHRFKAGAARILIATDV 312
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
+RG+D+ V +VINFD P + ++HR+GR+ R G G A+++I +D + IE+ +
Sbjct: 313 ASRGLDIPTVELVINFDIPADPDDFIHRVGRTARAGRKGDAVSIIGEKDIDRIQSIEERI 372
Query: 313 GTEIKSIPKVID 324
+++ + V D
Sbjct: 373 NKKMELLEDVND 384
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 104/317 (32%), Positives = 166/317 (52%)
Query: 19 PAKITSKATLIIVPTRELALQTSQICIELAKH---LNVKVMVTTGGTNLRDDIMRIYQKV 75
PA L++ PTRELA+Q +C + K+ L +K + GG N+ + Q V
Sbjct: 67 PADKPLLRALVMTPTRELAIQ---VCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGV 123
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
+++ATPGR+ D++ + ++ LV+DEAD++L F ++ V ++ Q +L+
Sbjct: 124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLF 183
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ 195
SAT+ VK K L P +N+ E T V Q V +R+K L+ L + Q
Sbjct: 184 SATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRVDKRRKAELLSELVGRNNWRQ 243
Query: 196 SIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTR 255
++F ++ + E L +++T G H Q RNRV DF++G R LV +D+ R
Sbjct: 244 VLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAAR 303
Query: 256 GIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTE 315
G+D+QA+ +VIN + P +AE Y+HRIGR+GR G G AI+ ++ D L IE +G
Sbjct: 304 GLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEALIG-- 361
Query: 316 IKSIPKVIDPALYVARP 332
+ +P + P P
Sbjct: 362 -EKLPVTVQPGYEEGTP 377
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 104/317 (32%), Positives = 166/317 (52%)
Query: 19 PAKITSKATLIIVPTRELALQTSQICIELAKH---LNVKVMVTTGGTNLRDDIMRIYQKV 75
PA L++ PTRELA+Q +C + K+ L +K + GG N+ + Q V
Sbjct: 67 PADKPLLRALVMTPTRELAIQ---VCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQGV 123
Query: 76 HLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLY 135
+++ATPGR+ D++ + ++ LV+DEAD++L F ++ V ++ Q +L+
Sbjct: 124 DILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTMLF 183
Query: 136 SATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ 195
SAT+ VK K L P +N+ E T V Q V +R+K L+ L + Q
Sbjct: 184 SATYSDAVKQLSHKMLNQPQWVNVAENTTASTVEQLVYRVDKRRKAELLSELVGRNNWRQ 243
Query: 196 SIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTR 255
++F ++ + E L +++T G H Q RNRV DF++G R LV +D+ R
Sbjct: 244 VLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATDVAAR 303
Query: 256 GIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTE 315
G+D+QA+ +VIN + P +AE Y+HRIGR+GR G G AI+ ++ D L IE +G
Sbjct: 304 GLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEALIG-- 361
Query: 316 IKSIPKVIDPALYVARP 332
+ +P + P P
Sbjct: 362 -EKLPVTVQPGYEEGTP 377
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 448 (162.8 bits), Expect = 1.6e-41, P = 1.6e-41
Identities = 106/316 (33%), Positives = 169/316 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 130 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 188
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 189 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 248
Query: 142 TVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + K++++P + L + +L G+ QYY V +K L LFSK+
Sbjct: 249 FLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQELFSKIP 308
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ YI M Q R + CR L+ +DL
Sbjct: 309 FNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCRVLISTDL 368
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 369 TSRGIDAEKVNLVVNLDVPLDCETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQK 428
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I P L
Sbjct: 429 CTINLLPLPDPIPPDL 444
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 107/333 (32%), Positives = 176/333 (52%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLII 79
AK +A LI+ PTRELA+Q + K+L +K V GG +++ I + + V +++
Sbjct: 83 AKPVIRA-LILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILV 141
Query: 80 ATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATF 139
ATPGR+LDL+++ V N+ + VLDEAD++L F + ++ +LP RQ LL+SATF
Sbjct: 142 ATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATF 201
Query: 140 PLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
+K +K L P I + T +T V ++K L+ + Q ++
Sbjct: 202 SKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSFMIGSKNWRQVLV 261
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F + L++++ G IH +QA R R F+ G R LV +D+ RG+D
Sbjct: 262 FTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLD 321
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
+ + VINF+ P A+ Y+HR+GR+GR + G+AI+L++ ++ L IEK L +++
Sbjct: 322 IDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEKLLQSKMPQ 381
Query: 319 --IPKVIDPALYV-ARPEDMDRDNSTGASEENN 348
IP +P+ + A P R + +NN
Sbjct: 382 EVIPGY-EPSPFTKAAPVQAVRRARSNQRGKNN 413
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 107/333 (32%), Positives = 176/333 (52%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLII 79
AK +A LI+ PTRELA+Q + K+L +K V GG +++ I + + V +++
Sbjct: 83 AKPVIRA-LILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQINHLRRGVDILV 141
Query: 80 ATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATF 139
ATPGR+LDL+++ V N+ + VLDEAD++L F + ++ +LP RQ LL+SATF
Sbjct: 142 ATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPESRQNLLFSATF 201
Query: 140 PLTVKNFMEKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
+K +K L P I + T +T V ++K L+ + Q ++
Sbjct: 202 SKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQRKRELLSFMIGSKNWRQVLV 261
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F + L++++ G IH +QA R R F+ G R LV +D+ RG+D
Sbjct: 262 FTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKIRVLVATDVAARGLD 321
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
+ + VINF+ P A+ Y+HR+GR+GR + G+AI+L++ ++ L IEK L +++
Sbjct: 322 IDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRLLRDIEKLLQSKMPQ 381
Query: 319 --IPKVIDPALYV-ARPEDMDRDNSTGASEENN 348
IP +P+ + A P R + +NN
Sbjct: 382 EVIPGY-EPSPFTKAAPVQAVRRARSNQRGKNN 413
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 109/307 (35%), Positives = 172/307 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMRIYQKVHLIIATPGR 84
L + PT ELALQT ++ ++ K ++V+VM G + DI + +II TPG
Sbjct: 171 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK-----QIIIGTPGT 225
Query: 85 ILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFP 140
+LD K ++ ++ ++ VLDEAD ++ D +G DH I I LP E Q+LL+SATF
Sbjct: 226 VLDWCFKLKLIDLTKIRVFVLDEADVMI--DTQGFSDHSIRIQRALPSECQMLLFSATFE 283
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSII 198
+V +F E+ + DP I L EELTL + QYY + R+ K L ++ + I Q+II
Sbjct: 284 DSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAII 343
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FC + + + L ++ + G+ + + R + FR G + L+ +++ RGID
Sbjct: 344 FCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGID 403
Query: 259 VQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
V+ V +V+NFD P K E TYLHRIGR+GR+G G+A N+I ++ +L +I+
Sbjct: 404 VKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQDHF 463
Query: 313 GTEIKSI 319
+ IK +
Sbjct: 464 NSSIKQL 470
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 98/313 (31%), Positives = 169/313 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
LNKL + + TL++ PTRELA Q +Q LA+ + NVKV+ GG + I +
Sbjct: 60 LNKLDVKRFRIQ-TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLE 118
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+I+ TPGRI+D +D+ ++ + +LVLDEAD++L F+ LD +I P ERQ
Sbjct: 119 HGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQT 178
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQ-YYAFVQERQKVHCLNTLFSKL 191
LL+SATFP +++ ++ + +P + + Q +Y ++ ++ L L +
Sbjct: 179 LLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEH 238
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+ +++FCN+ + + +A ++ LG+ +H + Q R+ F + LV +D
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+D+ A++ V N+ E ++HRIGR+GR G G A +D Y + +E+
Sbjct: 299 VAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEY 358
Query: 312 LGTEI--KSIPKV 322
L EI +S+P +
Sbjct: 359 LDREITSESLPSL 371
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
Identities = 98/313 (31%), Positives = 169/313 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
LNKL + + TL++ PTRELA Q +Q LA+ + NVKV+ GG + I +
Sbjct: 60 LNKLDVKRFRIQ-TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLE 118
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+I+ TPGRI+D +D+ ++ + +LVLDEAD++L F+ LD +I P ERQ
Sbjct: 119 HGAHIIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQT 178
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQ-YYAFVQERQKVHCLNTLFSKL 191
LL+SATFP +++ ++ + +P + + Q +Y ++ ++ L L +
Sbjct: 179 LLFSATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIEQHFYQLDDDKSRMQALQLLLLEH 238
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+ +++FCN+ + + +A ++ LG+ +H + Q R+ F + LV +D
Sbjct: 239 KPESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATD 298
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+D+ A++ V N+ E ++HRIGR+GR G G A +D Y + +E+
Sbjct: 299 VAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEY 358
Query: 312 LGTEI--KSIPKV 322
L EI +S+P +
Sbjct: 359 LDREITSESLPSL 371
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 102/301 (33%), Positives = 162/301 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L K L +K + GG ++ + + +K H++IATPGR+ D
Sbjct: 74 LVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLAD 133
Query: 88 -LMDKQVANMDHCKILVLDEADKLLSQ---DFKGMLDHVISILPHERQILLYSATFPLTV 143
L NM + LVLDEAD+LL Q DF L+ ++S +P RQ LL+SAT T+
Sbjct: 134 HLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTL 193
Query: 144 KNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSII 198
K P+ + T++ + Q Y V E+ K VH + T +L+ II
Sbjct: 194 KELQGLATNQPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIII 253
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F N+ + ++L + + + +H+ M Q R F+S R L+ +D+ +RG+D
Sbjct: 254 FTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGLD 313
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
+ V VVIN + P + + Y+HR+GR+ R G G AI L+T D + LH IE+E+ ++
Sbjct: 314 IPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEEIKQQLAE 373
Query: 319 I 319
+
Sbjct: 374 L 374
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 111/328 (33%), Positives = 168/328 (51%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLII 79
A+ +L++ PTRELA Q ++ KHL + + GG + ++ I + V ++I
Sbjct: 69 ARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRGVDVLI 128
Query: 80 ATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATF 139
ATPGR+LD ++ + +I+V+DEAD++L F ++ + S+ P RQ L +SAT
Sbjct: 129 ATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLFFSATM 188
Query: 140 PLTVKNFMEKHLKDPYEINLMEELTL-----KGVTQYYAFVQERQ---KVHCLNTLFSKL 191
++ L P I + + T +GV + ++R+ K L L
Sbjct: 189 APEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRALIDAE 248
Query: 192 --QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVC 249
+ +IIFCN V+++AK + + GY IH + Q+ R R FR G R LV
Sbjct: 249 GEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGKLRLLVA 308
Query: 250 SDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIE 309
SD+ RG+DV +V+ V NFD P E Y+HRIGR+GR G G AI L D AL IE
Sbjct: 309 SDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEKALDAIE 368
Query: 310 KELGTEIKSIPKVIDPALYVARPEDMDR 337
K + K IP++ +PA +PE R
Sbjct: 369 KLIQ---KDIPRLENPARTEEKPEAKPR 393
>UNIPROTKB|H0Y7X6 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
ProteinModelPortal:H0Y7X6 PRIDE:H0Y7X6 Ensembl:ENST00000437943
Bgee:H0Y7X6 Uniprot:H0Y7X6
Length = 325
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 98/274 (35%), Positives = 159/274 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 4 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 60
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 61 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 120
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 121 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 180
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 181 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 240
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHR 280
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR
Sbjct: 241 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHR 274
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 98/274 (35%), Positives = 159/274 (58%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRI 71
L +L P +T + +++++ TRELA Q S+ +K++ NVKV V GG +++ D +
Sbjct: 104 LQQLEP--VTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD-EEV 160
Query: 72 YQK--VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPH 128
+K H+++ TPGRIL L + N+ H K +LDE DK+L Q D + + + + PH
Sbjct: 161 LKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPH 220
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEE--LTLKGVTQYYAFVQERQKVHCLNT 186
E+Q++++SAT ++ K ++DP EI + +E LTL G+ QYY +++ +K L
Sbjct: 221 EKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFD 280
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L L+ NQ +IF S QR LA+ + E + IH M Q R + F+ R
Sbjct: 281 LLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHR 280
LV ++LF RG+D++ VN+ N+D P+ ++TYLHR
Sbjct: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHR 374
>UNIPROTKB|Q9KU63 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 OMA:PLAMDQR KO:K05590 ProtClustDB:PRK11192 PIR:F82295
RefSeq:NP_230309.1 ProteinModelPortal:Q9KU63 DNASU:2615450
GeneID:2615450 KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 113/347 (32%), Positives = 184/347 (53%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRD--DIMRIYQ 73
K PA+I LI+ PTRELA+Q ++ LAK+ + + TGG ++ DI+ Q
Sbjct: 72 KAGPARI-----LILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHADILATTQ 126
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
+ ++ATPGR+L+ +D + + + L+LDEAD++L F +D + + +Q L
Sbjct: 127 DI--VVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRWRKQTL 184
Query: 134 LYSATFP-LTVKNFMEKHLKDPYEINLME-ELTLKGVTQYYAFVQER-QKVHCLNTLFSK 190
L+SAT V+ F LKDP ++ K ++Q+Y + KV L + ++
Sbjct: 185 LFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRADDMPHKVELLKKILTE 244
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
Q +SI+F + +R+ L ++ + C +I M Q RN FR G L+ +
Sbjct: 245 -QAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLAT 303
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
D+ RGIDV ++ VINFD P+ A+ YLHRIGR+GR G GIAI+L+ D+ + R+E+
Sbjct: 304 DVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMARVER 363
Query: 311 ELGTEIKSI------PKVIDPALYVARPEDMDRDNSTGASEENNVSK 351
+ E+K PK P ++ + +D+ + GA ++ SK
Sbjct: 364 YIKEEVKERFIDGLRPKHKKP-VFKKKKKDIKKTADKGAVKKKTTSK 409
>TIGR_CMR|VC_0660 [details] [associations]
symbol:VC_0660 "ATP-dependent RNA helicase SrmB"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PLAMDQR
KO:K05590 ProtClustDB:PRK11192 PIR:F82295 RefSeq:NP_230309.1
ProteinModelPortal:Q9KU63 DNASU:2615450 GeneID:2615450
KEGG:vch:VC0660 PATRIC:20080435 Uniprot:Q9KU63
Length = 423
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 113/347 (32%), Positives = 184/347 (53%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRD--DIMRIYQ 73
K PA+I LI+ PTRELA+Q ++ LAK+ + + TGG ++ DI+ Q
Sbjct: 72 KAGPARI-----LILTPTRELAMQVAEQAQALAKNTRLNIFTITGGVQYQEHADILATTQ 126
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
+ ++ATPGR+L+ +D + + + L+LDEAD++L F +D + + +Q L
Sbjct: 127 DI--VVATPGRLLEYIDAERFDCRAIEWLILDEADRMLDMGFGPTVDRLSTECRWRKQTL 184
Query: 134 LYSATFP-LTVKNFMEKHLKDPYEINLME-ELTLKGVTQYYAFVQER-QKVHCLNTLFSK 190
L+SAT V+ F LKDP ++ K ++Q+Y + KV L + ++
Sbjct: 185 LFSATLEGRGVEGFTADLLKDPAHVDAEPPRRERKKISQWYHRADDMPHKVELLKKILTE 244
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
Q +SI+F + +R+ L ++ + C +I M Q RN FR G L+ +
Sbjct: 245 -QAERSIVFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNILLAT 303
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
D+ RGIDV ++ VINFD P+ A+ YLHRIGR+GR G GIAI+L+ D+ + R+E+
Sbjct: 304 DVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLVEAHDQPMMARVER 363
Query: 311 ELGTEIKSI------PKVIDPALYVARPEDMDRDNSTGASEENNVSK 351
+ E+K PK P ++ + +D+ + GA ++ SK
Sbjct: 364 YIKEEVKERFIDGLRPKHKKP-VFKKKKKDIKKTADKGAVKKKTTSK 409
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 438 (159.2 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 107/322 (33%), Positives = 177/322 (54%)
Query: 22 ITSKAT--LIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLI 78
+ S AT LI+ PTRE+A+Q + + K ++ V GGT L D +R+ +K H+
Sbjct: 69 LDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRL-KKCHIA 127
Query: 79 IATP--GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLY 135
+ +P GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L
Sbjct: 128 VGSPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLAV 187
Query: 136 SATFPLTVKNFMEKHLKDPYEINLME-ELTLKGVTQYYAFVQER--------QKVHCLNT 186
SAT+P ++ N + ++++P + L + +L G+ QYY V +K L
Sbjct: 188 SATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQE 247
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
LFSK+ NQ+++F N R + LA+ +T G+ I M Q+ R + CR
Sbjct: 248 LFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCRV 307
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYAL 305
L+ +DL +RGID + VN+VIN D P ETY+HRIGR+GR+G LG+++ E+ +
Sbjct: 308 LISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENMM 367
Query: 306 HRIEKELGTEIKSIPKVIDPAL 327
+I ++ ++ +P+ I P +
Sbjct: 368 MKIAQKCNLQLLPLPEPIPPGM 389
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 432 (157.1 bits), Expect = 1.4e-40, P = 1.4e-40
Identities = 100/320 (31%), Positives = 164/320 (51%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
LNK+T T+ L++ PTRELA+Q ++ AK + N V+ GG +++ + +
Sbjct: 65 LNKVTSQ--TTPQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALK 122
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
+ +I+ TPGR++D M + ++ + LVLDEAD++L F ++ ++ P +RQ+
Sbjct: 123 RGPQVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQL 182
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKL 191
L+SAT P +K KHLK+ I++ T+ + Q + V + K+ L +
Sbjct: 183 ALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHNKLEALVRVLEVE 242
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
IIF + LA+K+ GY +H M Q R R ++G L+ +D
Sbjct: 243 NTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATD 302
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV+ + V+N+D P E Y+HRIGR+GR G G+AI +T + L IE+
Sbjct: 303 VAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERA 362
Query: 312 LGTEIKSIPKVIDPALYVAR 331
+ I + KV P R
Sbjct: 363 TNSRISPM-KVPSPETVAER 381
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 439 (159.6 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 105/316 (33%), Positives = 168/316 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 131 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 189
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 190 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 249
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + ++++DP + L + +L G+ QYY V +K L LFSK+
Sbjct: 250 VLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKVP 309
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 310 FNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDL 369
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 370 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQK 429
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I P L
Sbjct: 430 CNINLLPLPDPIPPGL 445
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 101/330 (30%), Positives = 177/330 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q CI+ + ++ GG I + Q VH++IA PGR++D
Sbjct: 190 LVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLID 249
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L+++ V N+ LVLDEADK+L F+ + ++ + +RQ L++SAT+P V+
Sbjct: 250 LLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALA 309
Query: 148 EKHLKD-PYEINLMEELTL---KGVTQYYAFVQERQKVHCLNTLFSKL--QINQSIIFCN 201
+ K+ P ++N+ LTL + + Q ++E +K+ L +L ++ ++ I+F
Sbjct: 310 KDLCKEQPIQVNV-GSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVE 368
Query: 202 STQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQA 261
+ + + + K + G IH Q R V ++F++G ++ +D+ +RG+D++
Sbjct: 369 TKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKN 428
Query: 262 VNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHR-IEKELGTEIKSIP 320
V VINFDFP E Y+HRIGR+GR G G + +T D+Y L + + K L + +P
Sbjct: 429 VKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLT-ADKYRLAKDLVKILRESEQPVP 487
Query: 321 KVIDPALYVARPEDMDRDNSTGASEENNVS 350
++ Y + + R+ + NNV+
Sbjct: 488 PQLEKISY-SMGNNQRRNPYYSSGRSNNVN 516
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 101/330 (30%), Positives = 177/330 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q CI+ + ++ GG I + Q VH++IA PGR++D
Sbjct: 190 LVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLID 249
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L+++ V N+ LVLDEADK+L F+ + ++ + +RQ L++SAT+P V+
Sbjct: 250 LLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALA 309
Query: 148 EKHLKD-PYEINLMEELTL---KGVTQYYAFVQERQKVHCLNTLFSKL--QINQSIIFCN 201
+ K+ P ++N+ LTL + + Q ++E +K+ L +L ++ ++ I+F
Sbjct: 310 KDLCKEQPIQVNV-GSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFKDNDRIIVFVE 368
Query: 202 STQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQA 261
+ + + + K + G IH Q R V ++F++G ++ +D+ +RG+D++
Sbjct: 369 TKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVASRGLDIKN 428
Query: 262 VNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHR-IEKELGTEIKSIP 320
V VINFDFP E Y+HRIGR+GR G G + +T D+Y L + + K L + +P
Sbjct: 429 VKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLT-ADKYRLAKDLVKILRESEQPVP 487
Query: 321 KVIDPALYVARPEDMDRDNSTGASEENNVS 350
++ Y + + R+ + NNV+
Sbjct: 488 PQLEKISY-SMGNNQRRNPYYSSGRSNNVN 516
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 101/308 (32%), Positives = 168/308 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L K L +K + GG ++ + + +K H++IATPGR+ D
Sbjct: 74 LVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRKPHVVIATPGRLAD 133
Query: 88 -LMDKQVANMDHCKILVLDEADKLLSQ---DFKGMLDHVISILPHERQILLYSATFPLTV 143
L NM + LV+DEAD+LL Q DF L+ +++ +P RQ LL+SAT T+
Sbjct: 134 HLRSSNTFNMKKIQFLVMDEADRLLEQGCTDFTTDLETILAAVPARRQTLLFSATLTDTL 193
Query: 144 KNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSII 198
K +P+ + T++ + Q Y V E+ K VH + T +L+ II
Sbjct: 194 KELQGLATNEPFFWEAQATVRTVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIII 253
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F N+ + ++L + + + +H+ M Q R F+S + R L+ +D+ +RG+D
Sbjct: 254 FTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALAKFKSSIYRILIATDVASRGLD 313
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
+ V VVIN + P + + Y+HR+GR+ R G G AI L+T D + LH IE+++ ++
Sbjct: 314 IPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLLHAIEEQIKQQLAE 373
Query: 319 IPKVIDPA 326
+ V++ A
Sbjct: 374 L--VVEEA 379
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 437 (158.9 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 105/316 (33%), Positives = 168/316 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 132 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 190
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 191 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 250
Query: 142 TVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + K+++DP + L + +L G+ QYY V +K L LFS++
Sbjct: 251 FLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIP 310
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 311 FNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDL 370
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 371 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQK 430
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I P L
Sbjct: 431 CNINLLPLPDPILPGL 446
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 437 (158.9 bits), Expect = 2.5e-40, P = 2.5e-40
Identities = 105/316 (33%), Positives = 168/316 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 132 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 190
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 191 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 250
Query: 142 TVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + K+++DP + L + +L G+ QYY V +K L LFS++
Sbjct: 251 FLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIP 310
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 311 FNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDL 370
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 371 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQK 430
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I P L
Sbjct: 431 CNINLLPLPDPILPGL 446
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 98/322 (30%), Positives = 173/322 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
LNKL K ++ ++I PTRELA Q ++ +LA+ + N+K++ GGT I +
Sbjct: 69 LNKLEVKKFRIQS-MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLE 127
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+I+ TPGR+ + + K +D+ +LVLDEAD++L F+ LD+++ P +RQ
Sbjct: 128 HGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQT 187
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQ-YYAFVQERQKVHCLNTLFSKL 191
LL+SATFP +K+ E + DP + + ++Q ++ + ++ L L
Sbjct: 188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDDRLDALRLLLLGN 247
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
Q+ + IFCN+ + + +A + G+ +H + Q R++ F + LV +D
Sbjct: 248 QVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATD 307
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+D+ ++++VIN+ + +E ++HRIGR+GR G GIA +L + ++ Y + +E
Sbjct: 308 VAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDY 367
Query: 312 LGTEIKSIPKVIDPALYVARPE 333
L I P L RP+
Sbjct: 368 LEAVITPEPLPSLAVLSNERPQ 389
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 105/326 (32%), Positives = 174/326 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++VPTRELA Q AK +K++ GGT+++ + + V ++IATPGR+LD
Sbjct: 85 LVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLD 144
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ + ++LVLDEAD++L F L V+ L RQ L +SATF +K
Sbjct: 145 HAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVA 204
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ ++DP E+ + T + V Q V +++K L+ L Q ++F + Q
Sbjct: 205 YRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGS 264
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ LA+++ G I+ +Q R + DF++G R L+ +D+ RG+D+ + V+
Sbjct: 265 DALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVV 324
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI-KSIPKVIDP 325
N+D P AE Y+HRIGR+GR G G+A++L++++++ L IE+ L T + + K +P
Sbjct: 325 NYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERLLNTRLPQEWLKGFEP 384
Query: 326 ALYVARPEDMDRDNSTGASEENNVSK 351
+ V E+ R S G S E K
Sbjct: 385 SP-VVHEENSPR-RSAGRSSEKRKLK 408
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 98/322 (30%), Positives = 173/322 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
LNKL K ++ ++I PTRELA Q ++ +LA+ + N+K++ GGT I +
Sbjct: 69 LNKLEVKKFRIQS-MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLE 127
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+I+ TPGR+ + + K +D+ +LVLDEAD++L F+ LD+++ P +RQ
Sbjct: 128 HGAHVIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQT 187
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQ-YYAFVQERQKVHCLNTLFSKL 191
LL+SATFP +K+ E + DP + + ++Q ++ + ++ L L
Sbjct: 188 LLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDDRLDALRLLLLGN 247
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
Q+ + IFCN+ + + +A + G+ +H + Q R++ F + LV +D
Sbjct: 248 QVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATD 307
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+D+ ++++VIN+ + +E ++HRIGR+GR G GIA +L + ++ Y + +E
Sbjct: 308 VAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDY 367
Query: 312 LGTEIKSIPKVIDPALYVARPE 333
L I P L RP+
Sbjct: 368 LEAVITPEPLPSLAVLSNERPQ 389
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 96/292 (32%), Positives = 155/292 (53%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLII 79
AK L++ PTRELA Q + K+L ++ V GG + I ++ V +++
Sbjct: 69 AKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVDVLV 128
Query: 80 ATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATF 139
ATPGR+LDL+ + + +ILVLDEAD++L F + ++++LP +RQ L++SATF
Sbjct: 129 ATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATF 188
Query: 140 PLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
++ + + P EI++ V Q+ V + QK L L + Q ++
Sbjct: 189 SDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQKSALLIQLIKQENWQQVLV 248
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F + LAK + + IH +Q R + DF+SG R LV +D+ RG+D
Sbjct: 249 FSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAARGLD 308
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
+ + V+NFD P + E Y+HRIGR+GR G G A++L++ E+ L IE+
Sbjct: 309 IDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIER 360
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 105/326 (32%), Positives = 174/326 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++VPTRELA Q AK +K++ GGT+++ + + V ++IATPGR+LD
Sbjct: 85 LVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLD 144
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ + ++LVLDEAD++L F L V+ L RQ L +SATF +K
Sbjct: 145 HAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKIKAVA 204
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ ++DP E+ + T + V Q V +++K L+ L Q ++F + Q
Sbjct: 205 YRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIGSKNWQQVLVFTKTRQGS 264
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
+ LA+++ G I+ +Q R + DF++G R L+ +D+ RG+D+ + V+
Sbjct: 265 DALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAARGLDIAQLEQVV 324
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI-KSIPKVIDP 325
N+D P AE Y+HRIGR+GR G G+A++L++++++ L IE+ L T + + K +P
Sbjct: 325 NYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQPQLEAIERLLNTRLPQEWLKGFEP 384
Query: 326 ALYVARPEDMDRDNSTGASEENNVSK 351
+ V E+ R S G S E K
Sbjct: 385 SP-VVHEENSPR-RSAGRSSEKRKLK 408
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 437 (158.9 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 105/316 (33%), Positives = 168/316 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 137 STQILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 195
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 196 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 255
Query: 142 TVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + K++++P + L + +L G+ QYY V +K L LFSK+
Sbjct: 256 FLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQELFSKIP 315
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 316 FNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCRVLISTDL 375
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 376 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQK 435
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I P L
Sbjct: 436 CHINLLLLPDPIPPGL 451
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 101/303 (33%), Positives = 156/303 (51%)
Query: 15 NKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQK 74
NK+ K S +LI+ PTRELA Q Q + + L +K V GG + + I
Sbjct: 67 NKID-IKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELG 125
Query: 75 VHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILL 134
+ +++ATPGR+LDL++ N ++ VLDEAD +L F + +IS LP RQ LL
Sbjct: 126 LDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLL 185
Query: 135 YSATFPLTVKNFMEKHLKDPYEINLMEE-LTLKGVTQYYAFVQERQKVHCLNTLFSKLQI 193
+SAT P ++ E L DP +I + E +T+ V Q + + KV L + +K
Sbjct: 186 FSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNILTKADY 245
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
+ +IFC + +++ K + + +H+ QA R +F+ R LV +D+
Sbjct: 246 EKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVATDVA 305
Query: 254 TRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
RGIDV + +VIN++ P+ Y+HRIGR+ R G G+AI+ D L IE +G
Sbjct: 306 ARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIENSIG 365
Query: 314 TEI 316
I
Sbjct: 366 QVI 368
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
Identities = 106/314 (33%), Positives = 172/314 (54%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ-KVHLI 78
A + + + P+RELA Q + E+ K+ VK T G ++D + + + ++
Sbjct: 180 ASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVK---TAFG--IKDSVPKGAKIDAQIV 234
Query: 79 IATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLY 135
I TPG ++DLM ++ + K+ VLDEAD +L Q +G+ D + I LP QI+L+
Sbjct: 235 IGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQ--QGLGDQSMRIKHLLPRNTQIVLF 292
Query: 136 SATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKLQI 193
SATF V+ + E+ + EI L EEL+++G+ Q Y Q E K + L L+ L I
Sbjct: 293 SATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLLTI 352
Query: 194 NQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLF 253
QSIIFC E +A+++T G+ + + A R+ + FR G + LV +++
Sbjct: 353 GQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTNVI 412
Query: 254 TRGIDVQAVNVVINFDFP-KMA-----ETYLHRIGRSGRYGHLGIAINLITYEDRYA-LH 306
RGIDV VN+V+N+D P A +TYLHRIGR+GR+G +G++IN + + + ++
Sbjct: 413 ARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEEMN 472
Query: 307 RIEKELGTEIKSIP 320
I++ I +P
Sbjct: 473 AIQEYFQRPITRVP 486
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 434 (157.8 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 105/316 (33%), Positives = 167/316 (52%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 130 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 188
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 189 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 248
Query: 142 TVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + K+++DP + L + +L G+ QYY V +K L LFS++
Sbjct: 249 FLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQELFSRIP 308
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 309 FNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDL 368
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + RI ++
Sbjct: 369 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQK 428
Query: 312 LGTEIKSIPKVIDPAL 327
+ +P I L
Sbjct: 429 CNINLLPLPDPIPSGL 444
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 436 (158.5 bits), Expect = 5.9e-40, P = 5.9e-40
Identities = 100/321 (31%), Positives = 169/321 (52%)
Query: 11 FLYLNKLTPAKI-TSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIM 69
F ++ P K +I+ PTRELA+Q + C K LN++ GG ++D I
Sbjct: 477 FRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIA 536
Query: 70 RIYQKVHLIIATPGRILDLMDK---QVANMDHCKILVLDEADKLLSQDFKGMLDHVISIL 126
+ + +++ TPGR++D++ +V N+ C LVLDEAD++ F+ + +I+ +
Sbjct: 537 DLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNI 596
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLN 185
+RQ +L+SATFP ++ K LK P EI + + V Q E K L
Sbjct: 597 RPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASEVEQIVEVRPEESKFSRLL 656
Query: 186 TLFSKLQINQ----SIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRS 241
L +L NQ +++F + + + L + + GY IH Q R+ D+++
Sbjct: 657 ELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKA 716
Query: 242 GLCRNLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE- 300
G+ L+ + + RG+DV+++ +V+N+D P E Y+HR+GR+GR GH G+A+ IT E
Sbjct: 717 GVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQ 776
Query: 301 DRYALHRIEKELGTEIKSIPK 321
++YA+ I K L + +PK
Sbjct: 777 EKYAVD-IAKALKMSKQPVPK 796
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 107/297 (36%), Positives = 168/297 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMRIYQKVHLIIATPGR 84
L + PT ELALQT ++ ++ K ++V+VM G + DI + +II TPG
Sbjct: 174 LCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK-----QIIIGTPGT 228
Query: 85 ILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFP 140
+LD K ++ ++ ++ VLDEAD ++ D +G DH I I LP E Q+LL+SATF
Sbjct: 229 VLDWCFKLKLIDLTKIRVFVLDEADVMI--DTQGFSDHSIRIQRALPSECQMLLFSATFE 286
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSII 198
+V +F E+ + DP I L EELTL + QYY + R+ K L ++ + I Q+II
Sbjct: 287 DSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIYGSITIGQAII 346
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FC + + + L ++ + G+ + + R + FR G + L+ +++ RGID
Sbjct: 347 FCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGID 406
Query: 259 VQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLITYEDRYALHRIE 309
V+ V +V+NFD P K E TYLHRIGR+GR+G G+A N+I ++ +L +I+
Sbjct: 407 VKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDELPSLMKIQ 463
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 102/311 (32%), Positives = 164/311 (52%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
L+++ P+K +A LI+ PTRELALQ + AK + V V+ GG + + I
Sbjct: 65 LHRIDPSKREPQA-LILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIR 123
Query: 73 QKVHLIIATPGRILDLM---DKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHE 129
+++ATPGR+ D + +K +A ++H LVLDEAD++L F L+ + +P
Sbjct: 124 NGAQIVVATPGRLCDHLRRDEKVLATVNH---LVLDEADEMLKLGFMDDLEVIFKAMPET 180
Query: 130 RQILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLF 188
RQ +L+SAT P +++ E+HLKDP + + + T+ + Q + V QK + +L
Sbjct: 181 RQTVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLL 240
Query: 189 SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLV 248
+ I+F + Q LA + GY ++ +AQ R RV + G +V
Sbjct: 241 EVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV 300
Query: 249 CSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRI 308
+D+ RG+DV + V N D P E+Y+HRIGR+GR G G A+ L+T +R L I
Sbjct: 301 ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVI 360
Query: 309 EKELGTEIKSI 319
E+ G ++ +
Sbjct: 361 ERVTGQKVAEV 371
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 93/287 (32%), Positives = 163/287 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+VPTRELA+Q ++ + K +K + GG + + R+ V +++ATPGR++D
Sbjct: 77 LILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMD 136
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L ++ + +++VLDEAD++L F ++ +I LP E Q LL+SAT V+
Sbjct: 137 LYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVRELA 196
Query: 148 EKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ ++DP+EI++ K ++Q+ V + K L+ L ++ Q +Q++IF +
Sbjct: 197 KTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFIETKHGA 256
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
L ++ + G H+ +QA R ++ DF+SG + LV + + RGID+ ++ V+
Sbjct: 257 AKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVV 316
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
N+D P A+ Y+HRIGR+GR +G AI+ ++ ++ L IE LG
Sbjct: 317 NYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLG 363
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
Identities = 93/287 (32%), Positives = 163/287 (56%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+VPTRELA+Q ++ + K +K + GG + + R+ V +++ATPGR++D
Sbjct: 77 LILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMD 136
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L ++ + +++VLDEAD++L F ++ +I LP E Q LL+SAT V+
Sbjct: 137 LYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVRELA 196
Query: 148 EKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ ++DP+EI++ K ++Q+ V + K L+ L ++ Q +Q++IF +
Sbjct: 197 KTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFIETKHGA 256
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
L ++ + G H+ +QA R ++ DF+SG + LV + + RGID+ ++ V+
Sbjct: 257 AKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVV 316
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG 313
N+D P A+ Y+HRIGR+GR +G AI+ ++ ++ L IE LG
Sbjct: 317 NYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLG 363
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 96/304 (31%), Positives = 164/304 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L + P K +A L++ PTRELA Q + + +V + + GG + + I +
Sbjct: 67 LISVQPCKPELRA-LVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV 125
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
V ++IATPGR+LDL+ + ++ + + LV DEAD++L FK +D + LP +Q L
Sbjct: 126 GVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTL 185
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEE-LTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SATF + + L +P + + E+ V Q V +K + L
Sbjct: 186 LFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIGSRN 245
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
Q ++F + Q + LAK++T+ G IH +Q R + H+F+ G R L+ +D+
Sbjct: 246 WKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDV 305
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RGID++ ++ VIN++ P AE Y+HRIGR+ R G+ G+A++L++ + + L IE+ L
Sbjct: 306 AARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELL 365
Query: 313 GTEI 316
++
Sbjct: 366 DIQL 369
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 96/304 (31%), Positives = 164/304 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L + P K +A L++ PTRELA Q + + +V + + GG + + I +
Sbjct: 67 LISVQPCKPELRA-LVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELKV 125
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
V ++IATPGR+LDL+ + ++ + + LV DEAD++L FK +D + LP +Q L
Sbjct: 126 GVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTL 185
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEE-LTLKGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SATF + + L +P + + E+ V Q V +K + L
Sbjct: 186 LFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIGSRN 245
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
Q ++F + Q + LAK++T+ G IH +Q R + H+F+ G R L+ +D+
Sbjct: 246 WKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDV 305
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
RGID++ ++ VIN++ P AE Y+HRIGR+ R G+ G+A++L++ + + L IE+ L
Sbjct: 306 AARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIEELL 365
Query: 313 GTEI 316
++
Sbjct: 366 DIQL 369
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 431 (156.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 105/315 (33%), Positives = 168/315 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 130 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 188
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 189 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 248
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + ++++DP + L + +L G+ QYY V +K L LFSK+
Sbjct: 249 ILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIP 308
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
NQ+++F N R + LA ++ G+ I M Q R + CR L+ +DL
Sbjct: 309 FNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDL 368
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIEKE 311
+RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I ++
Sbjct: 369 TSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQK 428
Query: 312 LGTEIKSIPKVIDPA 326
+ +P I PA
Sbjct: 429 CNINLLPLPDPI-PA 442
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 434 (157.8 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 97/305 (31%), Positives = 167/305 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + + + GG + + + +++ATPGR+ D
Sbjct: 511 LILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLND 570
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++ ++ + +LVLDEAD++L F+ + +++ +P RQ L+Y+AT+P V+
Sbjct: 571 ILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIA 630
Query: 148 EKHLKDPYEINL--MEELTL-KGVTQYYAFVQERQKVHCLNTLF-SKLQINQSIIFCNST 203
L +P ++N+ ++EL K +TQY V + +K L + S+ + ++ IIFC++
Sbjct: 631 SDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTK 690
Query: 204 QRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVN 263
+ + LA+ + + IH Q R+ V + FRSG L+ +D+ RG+D++ +
Sbjct: 691 RLCDHLARSVGR-HFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIR 749
Query: 264 VVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYED-RYALHRIEKELGTEIKSIPKV 322
VVIN+DFP E Y+HRIGR+GR G G+A T +D +YA I+ G + P+V
Sbjct: 750 VVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQV 809
Query: 323 IDPAL 327
D A+
Sbjct: 810 RDIAM 814
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 96/291 (32%), Positives = 157/291 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q SQ L + V+ V GG ++ + + +K H+I+ATPGR+LD
Sbjct: 118 LVLAPTRELAYQISQAFETLGSTIGVRCAVIVGGMDMVAQSIALGKKPHIIVATPGRLLD 177
Query: 88 LMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNF 146
++ ++ + K L +DEAD+LL DF LD +I ILP R L+SAT V++
Sbjct: 178 HLENTKGFSLRNLKYLAIDEADRLLDMDFGESLDKIIRILPRTRHTYLFSATMSTKVESL 237
Query: 147 MEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQR 205
L +P +++ + T+ + Y + + K L L ++ +IIF +
Sbjct: 238 QRASLSNPVRVSVSSKYQTVSTLQSSYICIPHKHKNLYLVYLLNEFAGQSAIIFTTTVHE 297
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
+ +A + LG+ +H +++Q+ R FRS LV +D+ RG+D+ +V+VV
Sbjct: 298 TQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVV 357
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEI 316
NFD P ++TY+HR+GR+ R G G+AI+ +T D RIE L ++
Sbjct: 358 FNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDVEVWLRIEHALSKKL 408
>UNIPROTKB|I3L976 [details] [associations]
symbol:DDX47 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0005730 GO:GO:0008380 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00670000098028
OMA:IFIPSKF Ensembl:ENSSSCT00000025539 Uniprot:I3L976
Length = 456
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 96/304 (31%), Positives = 171/304 (56%)
Query: 14 LNKL--TPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRI 71
LN L TP ++ + L++ PTRELA Q S+ L + V+ V GG + + +
Sbjct: 82 LNALLETPQRLFA---LVLTPTRELAFQISEQFEALGSSIGVQCAVIVGGIDSMSQSLAL 138
Query: 72 YQKVHLIIATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
+K H++IATPGR++D ++ N+ K LV+DEAD++L+ DF+ +D ++ ++P +R
Sbjct: 139 AKKPHIVIATPGRLIDHLENTKGFNLRALKYLVMDEADRILNMDFETEVDKILKVIPRDR 198
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQKVHCLNTLFS 189
+ L+SAT V+ LK+P + + + T++ + QYY F+ + K L + +
Sbjct: 199 KTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILN 258
Query: 190 KLQINQSIIFC---NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
+L N +IFC N+TQR LL + LG+ +H +M+Q+ R + F++
Sbjct: 259 ELAGNSFMIFCSTCNNTQRTALLLRN---LGFTAIPLHGQMSQSKRLGSLNKFKAKARSI 315
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH 306
L+ +D+ +RG+D+ V+VV+NFD P ++ Y+HR+GR+ R G + +T+ Y
Sbjct: 316 LLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRCW-SQRAVTFPSIYQAS 374
Query: 307 RIEK 310
+++
Sbjct: 375 TVQR 378
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 92/298 (30%), Positives = 163/298 (54%)
Query: 17 LTPAKITSKA--TLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIYQ 73
L+ ITSK L++VPTRELALQ ++ +L+ + V+ GG++ + + +
Sbjct: 72 LSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRR 131
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
+++ TPGR++D +++ ++ LVLDEAD++L+ F ++ ++S P +Q+
Sbjct: 132 GAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVA 191
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTL-KGVTQYYAFVQERQKVHCLNTLFSKLQ 192
L+SAT P ++ K+L DP+E+ + + + ++Q Y +Q +K+ L +
Sbjct: 192 LFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSY--IQVARKMDALTRVLEVEP 249
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
I+F + Q E +A+K+ G+ I + QA R R R G LV +D+
Sbjct: 250 FEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDV 309
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEK 310
RG+DV+ ++ V+N+D P E+Y+HRIGR+GR G G A+ ++ + + L IEK
Sbjct: 310 AARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEK 367
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 108/313 (34%), Positives = 172/313 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMRIYQKVHLIIATPGR 84
L + PT ELALQT ++ + K ++V+VM G ++ D+ + +II TPG
Sbjct: 57 LCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK-----QIIIGTPGT 111
Query: 85 ILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFP 140
+LD +++ ++ ++ VLDEAD ++ D +G D I I LP E Q+LL+SATF
Sbjct: 112 VLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFSDQSIRIQRALPSECQMLLFSATFE 169
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSII 198
+V F E+ + DP I L EELTL + QYY + R+ K L ++ + I Q+II
Sbjct: 170 DSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAII 229
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FC + + + L ++ + G+ + + R + FR G + L+ +++ RGID
Sbjct: 230 FCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGID 289
Query: 259 VQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
V+ V +V+NFD P AE TYLHRIGR+GR+G G+A N+I + L +I+
Sbjct: 290 VKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHF 349
Query: 313 GTEIKSI-PKVID 324
+ IK + P+ +D
Sbjct: 350 NSSIKQLDPEDMD 362
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
Identities = 108/327 (33%), Positives = 177/327 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMR 70
LN++ ++ + L + PT ELALQT ++ + K ++V+VM G + D+ +
Sbjct: 158 LNRVNALELFPQC-LCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTK 216
Query: 71 IYQKVHLIIATPGRILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---L 126
++I TPG +LD +++ ++ ++ VLDEAD ++ D +G D I I L
Sbjct: 217 -----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFSDQSIRIQRAL 269
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCL 184
P E Q+LL+SATF +V F E+ + DP I L EELTL + QYY + R+ K L
Sbjct: 270 PSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQAL 329
Query: 185 NTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLC 244
++ + I Q+IIFC + + + L ++ + G+ + + R + FR G
Sbjct: 330 CNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKE 389
Query: 245 RNLVCSDLFTRGIDVQAVNVVINFDFPKMA------ETYLHRIGRSGRYGHLGIAINLIT 298
+ L+ +++ RGIDV+ V +V+NFD P ETYLHRIGR+GR+G G+A N+I
Sbjct: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIE 449
Query: 299 YEDRYALHRIEKELGTEIKSI-PKVID 324
+ L +I+ + IK + P+ +D
Sbjct: 450 VDKLPLLMKIQDHFNSSIKQLDPEDMD 476
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 397 (144.8 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 96/316 (30%), Positives = 163/316 (51%)
Query: 11 FLYLNK--LTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDI 68
F++LN ++ K L++ PTRELALQ C + + + +K + GG N + I
Sbjct: 274 FIHLNSQPVSRGKRNGPGMLVLTPTRELALQVGAECSKYS-YKGLKSVCIYGGGNRKGQI 332
Query: 69 MRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPH 128
I + V +IIATPGR+ DL N+ LVLDEADK+L F+ + ++ +
Sbjct: 333 QDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRP 392
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPY--EINLMEELTLKGVTQYYAFVQERQKVHCLNT 186
+RQ ++ SAT+P T++ +LK+P + ++ + + V Q E +K
Sbjct: 393 DRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQE 452
Query: 187 LFSKLQINQSIIFCNSTQRV-ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCR 245
L +I S + + + L+ ++ G +H Q+ R R DF++G +
Sbjct: 453 FLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVK 512
Query: 246 NLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYAL 305
L+ +DL +RG+DV V V N++FP+ E Y+HR+GR+GR G +G ++ L+T +D
Sbjct: 513 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 572
Query: 306 HRIEKELGTEIKSIPK 321
+ + L +SIP+
Sbjct: 573 GELIEILQRANQSIPE 588
Score = 46 (21.3 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 295 NLITYEDRYALHRIEKELG 313
+L++ ++Y LH+ EKE G
Sbjct: 589 DLLSMAEQYKLHKQEKETG 607
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 108/313 (34%), Positives = 172/313 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMRIYQKVHLIIATPGR 84
L + PT ELALQT ++ + K ++V+VM G ++ D+ + +II TPG
Sbjct: 150 LCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK-----QIIIGTPGT 204
Query: 85 ILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFP 140
+LD +++ ++ ++ VLDEAD ++ D +G D I I LP E Q+LL+SATF
Sbjct: 205 VLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFSDQSIRIQRALPSECQMLLFSATFE 262
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSII 198
+V F E+ + DP I L EELTL + QYY + R+ K L ++ + I Q+II
Sbjct: 263 DSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAII 322
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FC + + + L ++ + G+ + + R + FR G + L+ +++ RGID
Sbjct: 323 FCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVSRRGID 382
Query: 259 VQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
V+ V +V+NFD P AE TYLHRIGR+GR+G G+A N+I + L +I+
Sbjct: 383 VKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHF 442
Query: 313 GTEIKSI-PKVID 324
+ IK + P+ +D
Sbjct: 443 NSSIKQLDPEDMD 455
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 100/307 (32%), Positives = 162/307 (52%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q + + V+ GG + + V I+ATPGR++D
Sbjct: 77 LVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLSAPVDFIVATPGRLVD 136
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
L+D++ ++ ++LVLDEAD++L F +D + + P RQ LL++AT +
Sbjct: 137 LLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQTLLFTATMDSAMARLA 196
Query: 148 EKHLKDPYEINLM-EELTLKGVTQYYAFVQE-RQKVHCLNTLFSKLQINQSIIFCNSTQR 205
+ L++P I++ + T + + Q + K L L + + ++IIF + +
Sbjct: 197 GRLLREPERIDIAGTKTTHEHIEQRLHVADDLHHKNRLLRHLITDESLRRAIIFSATKRD 256
Query: 206 VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVV 265
E LA ++ G+ +H M Q RNR + G R LV +D+ RG+DV ++ V
Sbjct: 257 AENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATDVAARGLDVTGISHV 316
Query: 266 INFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDP 325
INFD PK AE Y+HRIGR+GR G GIAI+ + + L RIE+ +G +++P+ P
Sbjct: 317 INFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARIERYIG---QTLPEHHIP 373
Query: 326 ALYVARP 332
L +RP
Sbjct: 374 GLEPSRP 380
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 397 (144.8 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 96/316 (30%), Positives = 163/316 (51%)
Query: 11 FLYLNK--LTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDI 68
F++LN ++ K L++ PTRELALQ C + + + +K + GG N + I
Sbjct: 283 FIHLNSQPVSRGKRNGPGMLVLTPTRELALQVGAECSKYS-YKGLKSVCIYGGGNRKGQI 341
Query: 69 MRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPH 128
I + V +IIATPGR+ DL N+ LVLDEADK+L F+ + ++ +
Sbjct: 342 QDIMKGVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRP 401
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPY--EINLMEELTLKGVTQYYAFVQERQKVHCLNT 186
+RQ ++ SAT+P T++ +LK+P + ++ + + V Q E +K
Sbjct: 402 DRQTIMTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQE 461
Query: 187 LFSKLQINQSIIFCNSTQRV-ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCR 245
L +I S + + + L+ ++ G +H Q+ R R DF++G +
Sbjct: 462 FLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVK 521
Query: 246 NLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYAL 305
L+ +DL +RG+DV V V N++FP+ E Y+HR+GR+GR G +G ++ L+T +D
Sbjct: 522 ILIATDLASRGLDVSDVTHVFNYNFPRNIEEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 581
Query: 306 HRIEKELGTEIKSIPK 321
+ + L +SIP+
Sbjct: 582 GELIEILQRANQSIPE 597
Score = 46 (21.3 bits), Expect = 3.3e-39, Sum P(2) = 3.3e-39
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 295 NLITYEDRYALHRIEKELG 313
+L++ ++Y LH+ EKE G
Sbjct: 598 DLLSMAEQYKLHKQEKETG 616
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 424 (154.3 bits), Expect = 3.5e-39, P = 3.5e-39
Identities = 98/293 (33%), Positives = 161/293 (54%)
Query: 27 TLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
+L++ PTRELALQ + A V+ V GG ++ I + + HL++ATPGR++
Sbjct: 317 SLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 376
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVIS--ILPHE--RQILLYSATFPLT 142
D+M++ +D+CK LVLDEAD++L F+ + ++ +P + RQ +++SATFP
Sbjct: 377 DMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKE 436
Query: 143 VKNFMEKHLKDPYEINLMEEL--TLKGVTQYYAFVQERQKVHCLNTLFSKL-QINQSIIF 199
++ L++ Y + + T + +TQ +V+E K L L + + + +++F
Sbjct: 437 IQILARDFLEE-YIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVF 495
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
+ + + L + GY C IH +Q R H FRSG C +V + + RG+D+
Sbjct: 496 VETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDI 555
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
V VINFD P E Y+HRIGR+GR G+LG+A + Y D+ + I K+L
Sbjct: 556 SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF--YNDKNS--NITKDL 604
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 98/322 (30%), Positives = 167/322 (51%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + + +++L +K V GG + + Q + +++ATPGR+L+
Sbjct: 95 LILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQGLDVLVATPGRLLE 154
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ + ++ K LVLDEAD++L F ++ ++ + H+ Q L++SATF VK+
Sbjct: 155 HLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKSLA 214
Query: 148 EKHLKDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRV 206
+ LK P I++ +E T G + Q +V E +K L+ L Q ++F + +
Sbjct: 215 NQLLKSPKTISVSKENTTSGKIKQAVYWVTEERKRELLSELIGVNNWQQVLVFAGTKESA 274
Query: 207 ELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNVVI 266
LAK++ G H Q RN+ F G R LV +D+ RG+D+ + V+
Sbjct: 275 NTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLAFVV 334
Query: 267 NFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVIDPA 326
NF P + E Y+HR+GR+GR G G AI+L++ +D L IE+ + + + +++ P
Sbjct: 335 NFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDERFLENIEQLIERKFE---RIVAPG 391
Query: 327 LYVARPEDMDRDNSTGASEENN 348
R E + +T + N
Sbjct: 392 YEFNRLEASEYQEATVKRDSKN 413
>POMBASE|SPBC543.06c [details] [associations]
symbol:dbp8 "ATP-dependent RNA helicase Dbp8
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC543.06c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ OrthoDB:EOG4PP1RW
RefSeq:NP_596794.1 ProteinModelPortal:Q9HGM5 STRING:Q9HGM5
EnsemblFungi:SPBC543.06c.1 GeneID:2541069 KEGG:spo:SPBC543.06c
NextBio:20802183 Uniprot:Q9HGM5
Length = 453
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 108/331 (32%), Positives = 175/331 (52%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA+Q + L +LN+K + GG ++ + + ++ H+++ATPGR+ D
Sbjct: 79 LILTPTRELAIQIDEQFAALGANLNLKHALIVGGMDMIRQSIDLSKRPHVVVATPGRLAD 138
Query: 88 LM----DKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILP--HERQILLYSATFPL 141
L+ ++ +A + K LV+DEAD+LLS F LD S+LP +RQ LL++AT
Sbjct: 139 LIRSNGEETIAGLRRIKFLVMDEADRLLSPTFADDLDDCFSVLPASEDRQTLLFTATVTD 198
Query: 142 TVKNFM---EKHLKDP---YEINLMEELTLKGVTQYYAFV----QERQKVHCLNTLFSKL 191
++ +K+ K P YE+ + Q Y FV +E VH L T+
Sbjct: 199 AIRQLKYQPQKNNKPPLWLYEVETDNISVPSTLQQSYIFVSSQVREAYLVHLL-TIPENA 257
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+ +IIF N T+ EL+ + L +H+ M Q R FR+ + LV +D
Sbjct: 258 K-KSAIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATD 316
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ +RG+D+ +V +VINFD P+ + Y+HR+GR+ R G G +I+++T D +H IE
Sbjct: 317 VASRGLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDR 376
Query: 312 LGTEIKSIPKVIDPAL--YVARPEDMDRDNS 340
+GT++ V + + Y+ D R S
Sbjct: 377 VGTKLSEYEHVSENKMLEYIKEVTDAKRQAS 407
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 423 (154.0 bits), Expect = 3.8e-39, P = 3.8e-39
Identities = 106/330 (32%), Positives = 174/330 (52%)
Query: 27 TLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
+L++ PTRELALQ + + +V+ V GG ++ I + + HL++ATPGR+L
Sbjct: 301 SLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLL 360
Query: 87 DLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVIS--ILPHE--RQILLYSATFPLT 142
D+M++ +D+C LVLDEAD++L F+ + ++ +P + RQ +++SATFP
Sbjct: 361 DMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMFSATFPKE 420
Query: 143 VKNFMEKHLKDPYEINLMEEL--TLKGVTQYYAFVQERQKVHCLNTLFSKL-QINQSIIF 199
++ L+D Y + + T + +TQ +V+E K L L + + + +++F
Sbjct: 421 IQILARDFLED-YIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVF 479
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
+ + + L + GY C IH +Q R H FRSG C LV + + RG+D+
Sbjct: 480 VETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARGLDI 539
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELG---TEI 316
V VINFD P E Y+HRIGR+GR G+LG+A + + D+ I K+L E
Sbjct: 540 SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSF--FNDKNG--NITKDLLDILVEA 595
Query: 317 KS-IPKVIDPALYVARPEDMDRDNSTGASE 345
K +P ++ Y E + +S G S+
Sbjct: 596 KQEVPSWLESLAY----EHQHKSSSRGRSK 621
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 113/320 (35%), Positives = 176/320 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA+ + L + PT ELALQT ++ ++ K H +K+ G L +I
Sbjct: 152 LSRVEPAERYPQC-LCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKIS 209
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+ H++I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 210 E--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPR 265
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQER-QKVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R +K L
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCN 325
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L+ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 326 LYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 385
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 386 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 446 HSMNILNRIQEHFNKKIERL 465
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 96/321 (29%), Positives = 167/321 (52%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIY 72
L+ L + +A L++ PTRELA Q + L + + N+KV+ GG + I +
Sbjct: 63 LSNLNVKRFRVQA-LVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLE 121
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+++ TPGRILD + K ++ LVLDEAD++L F+ L+ +I+ P ERQ
Sbjct: 122 HGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQT 181
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQ-ERQKVHCLNTLFSKL 191
LL+SAT+P +++ + ++ I + + QY+ V+ + L TL
Sbjct: 182 LLFSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHH 241
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
Q S++FCN+ + V+ +A + + G+ +H M Q R++ F + LV +D
Sbjct: 242 QPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATD 301
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV ++ V N+D + E ++HRIGR+GR G G+A + + + Y + +I++
Sbjct: 302 VAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEY 361
Query: 312 LGTEIKSIPKVIDPALYVARP 332
+ I+ P + ARP
Sbjct: 362 MDIAIE--PSTLPQPAAGARP 380
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
Identities = 107/311 (34%), Positives = 168/311 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRIL 86
L + PT ELALQT ++ + K ++V+VM G + Q +II TPG +L
Sbjct: 172 LCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTKQ---IIIGTPGTVL 228
Query: 87 D-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFPLT 142
D +++ ++ ++ VLDEAD ++ D +G D I I LP E Q+LL+SATF +
Sbjct: 229 DWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFSDQSIRIQRALPSECQMLLFSATFEDS 286
Query: 143 VKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFC 200
V F E+ + DP I L EELTL + QYY + R+ K L ++ + I Q+IIFC
Sbjct: 287 VWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIYGGITIGQAIIFC 346
Query: 201 NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQ 260
+ + + L ++ + G+ + + R + FR G + L+ +++ RGIDV+
Sbjct: 347 QTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVK 406
Query: 261 AVNVVINFDFPKMA------ETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGT 314
V +V+NFD P ETYLHRIGR+GR+G G+A N+I + L +I+ +
Sbjct: 407 QVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNS 466
Query: 315 EIKSI-PKVID 324
IK + P+ +D
Sbjct: 467 NIKQLDPEDMD 477
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 425 (154.7 bits), Expect = 5.1e-39, P = 5.1e-39
Identities = 105/317 (33%), Positives = 169/317 (53%)
Query: 24 SKATLIIVPTRELALQTSQICIELA-KHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATP 82
S LI+ PTRE+A+Q + + K ++ V GGT L D R+ +K H+ + +P
Sbjct: 130 STQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRL-KKCHIAVGSP 188
Query: 83 GRILDLMDKQVANMDHCKILVLDEADKLLSQ-DFKGMLDHVISILPHERQILLYSATFPL 141
GRI L++ N ++ +LDEADKLL + F+ ++ + S LP +Q+L SAT+P
Sbjct: 189 GRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPE 248
Query: 142 TVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQE--------RQKVHCLNTLFSKLQ 192
+ N + ++++DP + L + +L G+ QYY V +K L LFSK+
Sbjct: 249 ILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKIP 308
Query: 193 INQSIIFCNSTQRVELLAKKITELGYC--CYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
NQ+++F N R + LA ++ G+ C + M Q R + CR L+ +
Sbjct: 309 FNQALVFSNLHSRAQHLADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFHCRVLIST 368
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY-EDRYALHRIE 309
DL +RGID + VN+V+N D P ETY+HRIGR+GR+G LG+ + E+ + +I
Sbjct: 369 DLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIA 428
Query: 310 KELGTEIKSIPKVIDPA 326
++ + +P I PA
Sbjct: 429 QKCNINLLPLPDPI-PA 444
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 424 (154.3 bits), Expect = 5.6e-39, P = 5.6e-39
Identities = 103/329 (31%), Positives = 175/329 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
L+ L T++ L++ PTRE+A+Q + + + + ++ V GG + D +
Sbjct: 113 LDSLILENATTQV-LVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHL- 170
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQD----FKGMLDHVISILPH 128
+K H+ I +PGRI L++ + ++ VLDEADKLL D F+ ++ + S LP
Sbjct: 171 KKCHIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPA 230
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLME-ELTLKGVTQYYAFVQER--------Q 179
+Q+L SAT+P ++ + +++++P + L + L G+ QYY V +
Sbjct: 231 NKQMLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEE 290
Query: 180 KVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDF 239
KV L LFSK+ NQ+++F N R + LA ++ G I ++Q R
Sbjct: 291 KVQSLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKL 350
Query: 240 RSGLCRNLVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY 299
+ CR L+ +DL +RGID + VN+VIN D P+ ETY+HRIGR+GR+G LG+A+ +
Sbjct: 351 KQYQCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCH 410
Query: 300 -EDRYALHRIEKELGTEIKSIPKVIDPAL 327
E+ + I ++ ++ +P I P +
Sbjct: 411 GEEENKMMAIAQKCSLDLMHLPDPIPPGI 439
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 109/327 (33%), Positives = 176/327 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMR 70
L+++ K+ + L + PT ELALQT ++ + K ++V+VM G + D+ +
Sbjct: 158 LSRVNALKLFPQC-LCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 71 IYQKVHLIIATPGRILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---L 126
++I TPG +LD +++ ++ ++ VLDEAD ++ D +G D I I L
Sbjct: 217 -----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFADQSIRIQRAL 269
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCL 184
P E Q+LL+SATF +V F E+ + DP I L EELTL + QYY R+ K L
Sbjct: 270 PSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQAL 329
Query: 185 NTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLC 244
++ + I Q+IIFC + + + L ++ + G+ + + R + FR G
Sbjct: 330 CNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKE 389
Query: 245 RNLVCSDLFTRGIDVQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLIT 298
+ L+ +++ RGIDV+ V +V+NFD P AE TYLHRIGR+GR+G G+A N+I
Sbjct: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIE 449
Query: 299 YEDRYALHRIEKELGTEIKSI-PKVID 324
+ L +I+ IK + P+ +D
Sbjct: 450 VDKLPLLMKIQDHFSENIKQLDPEDMD 476
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 109/327 (33%), Positives = 177/327 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMR 70
L+++ K+ + L + PT ELALQT ++ + K ++V+VM G + D+ +
Sbjct: 158 LSRVNALKLFPQC-LCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 71 IYQKVHLIIATPGRILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---L 126
++I TPG +LD +++ ++ ++ VLDEAD ++ D +G D I I L
Sbjct: 217 -----QIVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFEDQSIRIQRAL 269
Query: 127 PHERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCL 184
P E Q+LL+SATF +V F E+ + DP I L EELTL + QYY R+ K L
Sbjct: 270 PSECQMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQAL 329
Query: 185 NTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLC 244
++ + I Q+IIFC + + + L ++ + G+ + + R + FR G
Sbjct: 330 CNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKE 389
Query: 245 RNLVCSDLFTRGIDVQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLIT 298
+ L+ +++ RGIDV+ V +V+NFD P AE TYLHRIGR+GR+G G+A N+I
Sbjct: 390 KVLITTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIE 449
Query: 299 YEDRYALHRIEKELGTEIKSI-PKVID 324
+ L +I+ + IK + P+ +D
Sbjct: 450 VDKLPLLMKIQDHFNSSIKQLDPEDMD 476
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 112/320 (35%), Positives = 176/320 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA+ + L + PT ELALQT ++ ++ K H +K+ G L +I
Sbjct: 152 LSRVEPAERYPQC-LCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKIS 209
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+ H++I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 210 E--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPR 265
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQER-QKVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R +K L
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCN 325
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
++ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 326 IYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 385
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 386 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 446 HSMNILNRIQEHFNKKIERL 465
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 113/320 (35%), Positives = 176/320 (55%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA+ + L + PT ELALQT ++ ++ K H +K+ G L +I
Sbjct: 152 LSRVEPAERYPQC-LCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKIS 209
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+ H++I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 210 E--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPK 265
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQER-QKVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R +K L
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCN 325
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L+ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 326 LYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 386 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 446 HSMNILNRIQEHFNKKIERL 465
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 94/306 (30%), Positives = 154/306 (50%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L++L + L+I PTRELA Q + + L + ++ + GG + + ++
Sbjct: 60 LHRLQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKA 119
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQIL 133
+++A PGR+LD + + ++ ++LVLDEAD++ F + V+ LP RQ L
Sbjct: 120 GAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTL 179
Query: 134 LYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAF--VQERQKVHCLNTLFSKL 191
L+SAT P+ ++ + L DP + + VT +A V++ K L L
Sbjct: 180 LFSATMPIDIRTLAQDILVDPVTVQV--GTVAPAVTVAHALYPVEQHLKTPLLLELLRHT 237
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+IF + R + L +++ + GY + ++Q R FR G + LV +D
Sbjct: 238 DTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATD 297
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RGIDV V+ VIN+D P AE Y+HRIGR+GR G A L+T +D + IE+
Sbjct: 298 IAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERS 357
Query: 312 LGTEIK 317
LG I+
Sbjct: 358 LGAPIE 363
>UNIPROTKB|Q8EHT1 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 98/290 (33%), Positives = 154/290 (53%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN----VKVMVTTGGTNLRDDIMRI 71
K PA L++VPTRELALQ S+ LA L+ + + + GG L + +
Sbjct: 89 KSVPA--AKPLALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGGVALEQQLADL 146
Query: 72 YQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQ 131
K L++ATPGR+LDL + ++D K LVLDEAD+LL F + +++++P +Q
Sbjct: 147 SAKPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMGFWPDMQKLMAMMPKRKQ 206
Query: 132 ILLYSATFPLTVKNFMEKHL-KDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFS 189
LL+SAT P + + K L DP ++ + G + + V + K L L
Sbjct: 207 TLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLK 266
Query: 190 KLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVC 249
+ Q Q ++F ++ + +AK++ + G +H Q R++ DF++ + LV
Sbjct: 267 QYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVA 326
Query: 250 SDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY 299
+DL RGI V A+ VVIN D P A Y+HRIGR+ R G G+AI+L+ +
Sbjct: 327 TDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCH 376
>TIGR_CMR|SO_1136 [details] [associations]
symbol:SO_1136 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_716761.1 ProteinModelPortal:Q8EHT1 GeneID:1168967
KEGG:son:SO_1136 PATRIC:23521912 OMA:IGAKENA ProtClustDB:CLSK869861
Uniprot:Q8EHT1
Length = 447
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 98/290 (33%), Positives = 154/290 (53%)
Query: 16 KLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN----VKVMVTTGGTNLRDDIMRI 71
K PA L++VPTRELALQ S+ LA L+ + + + GG L + +
Sbjct: 89 KSVPA--AKPLALVLVPTRELALQVSEALHALASQLSTSAPLNIQLLCGGVALEQQLADL 146
Query: 72 YQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQ 131
K L++ATPGR+LDL + ++D K LVLDEAD+LL F + +++++P +Q
Sbjct: 147 SAKPQLVVATPGRLLDLCTQSHISLDAIKHLVLDEADRLLEMGFWPDMQKLMAMMPKRKQ 206
Query: 132 ILLYSATFPLTVKNFMEKHL-KDPYEINLMEELTLKG-VTQYYAFVQERQKVHCLNTLFS 189
LL+SAT P + + K L DP ++ + G + + V + K L L
Sbjct: 207 TLLFSATLPEALDSLAGKLLTNDPLKVEASTRNAVVGEIEEQLYLVNKGSKAQALIALLK 266
Query: 190 KLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVC 249
+ Q Q ++F ++ + +AK++ + G +H Q R++ DF++ + LV
Sbjct: 267 QYQWPQVLVFISARDDADAIAKRLVKAGINAAALHGEKDQTVRSQTLADFKADRIQVLVA 326
Query: 250 SDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITY 299
+DL RGI V A+ VVIN D P A Y+HRIGR+ R G G+AI+L+ +
Sbjct: 327 TDLMARGIHVDALPVVINLDLPTSAPVYVHRIGRTARAGAKGLAISLVCH 376
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 96/304 (31%), Positives = 163/304 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA+Q + + V+ GG I + + V ++IATPGR++D
Sbjct: 242 LILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLID 301
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++ Q N+ LVLDEAD++L F+ + ++S + +RQ LL+SAT+P V+
Sbjct: 302 MLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVETLA 361
Query: 148 EKHLKDPYEINLMEELTLKG---VTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQ 204
+ L+DPY+ ++ LK + Q V +K + L TL +L I+ T+
Sbjct: 362 RQFLRDPYKA-IIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETK 420
Query: 205 R-VELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVN 263
R + + +++ G+ IH Q+ R+RV +F+SG + +D+ RG+DV+ +
Sbjct: 421 RGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIK 480
Query: 264 VVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVI 323
V+N+DFP E Y+HRIGR+GR G G+A T+++ + +EL ++ +V+
Sbjct: 481 CVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNA----KFARELVKILQEAGQVV 536
Query: 324 DPAL 327
P L
Sbjct: 537 PPTL 540
>TIGR_CMR|BA_4509 [details] [associations]
symbol:BA_4509 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268806 OMA:YAHVEPK HSSP:P10081
RefSeq:NP_846734.1 RefSeq:YP_021153.1 RefSeq:YP_030436.1
ProteinModelPortal:Q81LV0 SMR:Q81LV0
EnsemblBacteria:EBBACT00000013143 EnsemblBacteria:EBBACT00000016547
EnsemblBacteria:EBBACT00000022918 GeneID:1088235 GeneID:2818505
GeneID:2850064 KEGG:ban:BA_4509 KEGG:bar:GBAA_4509 KEGG:bat:BAS4187
ProtClustDB:CLSK887589 BioCyc:BANT260799:GJAJ-4244-MONOMER
BioCyc:BANT261594:GJ7F-4386-MONOMER Uniprot:Q81LV0
Length = 436
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 89/312 (28%), Positives = 172/312 (55%)
Query: 14 LNKLTPAKITSKATLIIV-PTRELALQTSQICIELAKHLNVKVMVTT----GGTNLRDDI 68
LN++ P + + L+I PTRELA Q + ++L K M+T GGT+ + I
Sbjct: 63 LNRINPGR--EEVQLVITAPTRELAQQIYEEIVKLTKFCAEDQMITARCLIGGTDKQRSI 120
Query: 69 MRIYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPH 128
++ ++ H+++ TPGRI DL+++Q + +++DEAD +L F +D + + +P
Sbjct: 121 EKLKKQPHIVVGTPGRIKDLVEEQALFVHKANTIIVDEADLMLDMGFIHDVDKIAARMPK 180
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQE-RQKVHCLNTL 187
Q+L++SAT P +K F++K++++P I++ + G ++Y + R K+ +N +
Sbjct: 181 NLQMLVFSATIPQKLKPFLKKYMENPEHIHINPKQVAAGNIEHYLVPSKHRNKIDLVNKM 240
Query: 188 FSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNL 247
+ + +++F N+ + + +A + E G IH ++ R ++ R + +
Sbjct: 241 LLQFKPYLAVVFTNTKKMADQVADGLMERGLKVGRIHGDLSPRDRKKMMKQIRDLEFQYI 300
Query: 248 VCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHR 307
V +DL RGID++ ++ VIN++ P + ++HR+GR+ R GH GIA+ + + AL
Sbjct: 301 VATDLAARGIDIEGISHVINYELPSDLDFFVHRVGRTARAGHSGIAVTIYDPANEEALDS 360
Query: 308 IEKELGTEIKSI 319
+EK+ E K +
Sbjct: 361 LEKQRHIEFKHV 372
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 421 (153.3 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 96/307 (31%), Positives = 169/307 (55%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q+ IE + +V+ GG + + V ++IATPGR++D
Sbjct: 234 LVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARDLERGVEIVIATPGRLID 293
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+++ ++ C LVLDEAD++L F+ + ++ + +RQ+L++SAT+P V+
Sbjct: 294 FLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWPKEVRQLA 353
Query: 148 EKHLKDPYEINLMEELTLKG---VTQYYAFVQERQKVHCLNTLFSKLQIN---QSIIFCN 201
E+ L + ++N+ L+L + Q E +K+ L L + + ++IIF
Sbjct: 354 EEFLNNYIQVNI-GSLSLSANHNILQIVDVCDENEKLMKLIKLLTDISAENETKTIIFVE 412
Query: 202 STQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQA 261
+ +RV+ + + I+ G+ IH +Q R+ V FR+G LV +D+ RG+DV
Sbjct: 413 TKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILVATDVAARGLDVDD 472
Query: 262 VNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI-P 320
V VIN+D+P +E Y+HRIGR+GR + G A L T+ + + + + L ++I P
Sbjct: 473 VKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLIQVLREANQTINP 532
Query: 321 KVIDPAL 327
K+++ A+
Sbjct: 533 KLMNMAM 539
>UNIPROTKB|P21507 [details] [associations]
symbol:srmB "SrmB, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0033592 "RNA strand annealing activity"
evidence=IDA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0000027 "ribosomal large subunit assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:D64044 GO:GO:0030687 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0033592 EMBL:D13169
OMA:PLAMDQR HOGENOM:HOG000268807 PDB:2YJT PDBsum:2YJT EMBL:X14152
PIR:G65035 RefSeq:NP_417071.1 RefSeq:YP_490804.1
ProteinModelPortal:P21507 SMR:P21507 DIP:DIP-10920N IntAct:P21507
MINT:MINT-1225512 PRIDE:P21507 EnsemblBacteria:EBESCT00000003180
EnsemblBacteria:EBESCT00000015098 GeneID:12934372 GeneID:947055
KEGG:ecj:Y75_p2529 KEGG:eco:b2576 PATRIC:32120551 EchoBASE:EB0968
EcoGene:EG10975 KO:K05590 ProtClustDB:PRK11192
BioCyc:EcoCyc:EG10975-MONOMER BioCyc:ECOL316407:JW2560-MONOMER
Genevestigator:P21507 Uniprot:P21507
Length = 444
Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 99/300 (33%), Positives = 156/300 (52%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA+Q S ELAKH ++ + TGG + + +++AT GR+L
Sbjct: 80 LILTPTRELAMQVSDHARELAKHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQ 139
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPL-TVKNF 146
+ ++ + + L+LDEAD++L F ++H+ +Q LL+SAT +++F
Sbjct: 140 YIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDF 199
Query: 147 MEKHLKDPYEINLMEELT-LKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSIIFCNSTQ 204
E+ L+DP E++ K + Q+Y + + K L L + + +SI+F +
Sbjct: 200 AERLLEDPVEVSANPSTRERKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRE 259
Query: 205 RVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVNV 264
RV LA + E G Y+ M Q RN G LV +D+ RGID+ V+
Sbjct: 260 RVHELANWLREAGINNCYLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSH 319
Query: 265 VINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIPKVID 324
V NFD P+ +TYLHRIGR+ R G G AI+L+ D L ++ + + IK+ +VID
Sbjct: 320 VFNFDMPRSGDTYLHRIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKA--RVID 377
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 418 (152.2 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 100/321 (31%), Positives = 173/321 (53%)
Query: 11 FLYLNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMR 70
F++L ++ L++ PTRELA Q ++ K + GG +
Sbjct: 288 FMHLQRIHNDSRMGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKE 347
Query: 71 IYQKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHER 130
I + V +++ATPGR+ D+++ + ++ LVLDEAD++L F+ + +++ +P +R
Sbjct: 348 IERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKR 407
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINL--MEELTL-KGVTQYYAFVQERQKVHCLNTL 187
Q L+Y+AT+P V+ L +P ++N+ ++EL K +TQ + +K L +
Sbjct: 408 QTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQI 467
Query: 188 F-SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
S+ ++ IIFC++ + + LA+ +T + IH +QA R+ V + FRSG
Sbjct: 468 LRSQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPV 526
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYED-RYAL 305
LV +D+ RG+DV+ + VV+N+DFP E Y+HRIGR+GR G G+A +D ++A
Sbjct: 527 LVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKHAS 586
Query: 306 HRIEKELGTEIKSIPKVIDPA 326
I+ G K P+V + A
Sbjct: 587 DLIKILEGANQKVPPQVREMA 607
>FB|FBgn0011802 [details] [associations]
symbol:Gem3 "Gemin3" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IMP] [GO:0015030 "Cajal body" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022618 "ribonucleoprotein complex
assembly" evidence=IMP] [GO:0071254 "cytoplasmic U snRNP body"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014296 GO:GO:0007528 GO:GO:0006200 GO:GO:0003676
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0016779 HSSP:P10081 KO:K13131
GeneTree:ENSGT00530000062880 GO:GO:0071254 GO:GO:0022618
EMBL:AF160911 RefSeq:NP_524019.1 UniGene:Dm.921 SMR:Q9V3C4
IntAct:Q9V3C4 MINT:MINT-750334 STRING:Q9V3C4
EnsemblMetazoa:FBtr0076292 EnsemblMetazoa:FBtr0334100 GeneID:39195
KEGG:dme:Dmel_CG6539 UCSC:CG6539-RA CTD:39195 FlyBase:FBgn0011802
InParanoid:Q9V3C4 OMA:TPTKIQA OrthoDB:EOG44MW6X GenomeRNAi:39195
NextBio:812430 Uniprot:Q9V3C4
Length = 1028
Score = 422 (153.6 bits), Expect = 1.9e-38, P = 1.9e-38
Identities = 108/314 (34%), Positives = 165/314 (52%)
Query: 22 ITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQKVHLIIA 80
I +I+VPTRELA+Q L K + K GGT++ D R+ + +II
Sbjct: 91 INQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDVAKDRKRMNES-RVIIG 149
Query: 81 TPGRILDLMDKQVANMDHCKILVLDEADKLL-SQDFKGMLDHVISILPHERQILLYSATF 139
TPGR+L L + +V ++ ++LVLDEAD+L ++ + + +I +P RQI+ SAT+
Sbjct: 150 TPGRLLHLYENRVFDVSKLRLLVLDEADQLYQTKSLQHTVSKLIEAMPKNRQIIACSATY 209
Query: 140 PLTVKNFMEKHLKDPYEINLMEELT-LKGVTQY-YAFVQE-------RQKVHCLNTLFSK 190
+ + K + P I+ E T L G+ Q+ Y Q+ R K+ L +F++
Sbjct: 210 DQNLDERLAKVMDKPMLISNSERATVLLGIRQFVYELPQQNNSVEEMRLKLQILGQIFNQ 269
Query: 191 LQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCS 250
L Q+IIF +S R + +T G C+ I M Q+ R VF +R+ R LV +
Sbjct: 270 LPYEQAIIFASSQMRADSYKNYLTASGIDCHLISGAMEQSERLHVFEGYRNFTMRILVAT 329
Query: 251 DLFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLI-TYEDRYALHRIE 309
DL RG+D N+VIN D P+ TYLHRIGR+GR+G GIAI I + ++ +
Sbjct: 330 DLMARGVDSPHANLVINIDPPQDHVTYLHRIGRAGRFGSKGIAITFIASKKESQRFREMS 389
Query: 310 KELGT--EIKSIPK 321
K++ T + PK
Sbjct: 390 KKIATAWSVLEFPK 403
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 98/320 (30%), Positives = 166/320 (51%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q ++ + K+L + + + GG + ++ + + V ++IATPGR++D
Sbjct: 79 LILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQRGVDVLIATPGRLMD 138
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
D+ M + L++DEAD++L F ++ + + LP RQ LL+SATFP ++
Sbjct: 139 QFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTLLFSATFPTDIQRLA 198
Query: 148 EKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQ-KVH--CLNTLFSKLQINQSIIFCNST 203
+ KDP +I + T + ++Q+ + K L + + I+FCN
Sbjct: 199 KTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVIEATNVKNGIVFCNRK 258
Query: 204 QRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAVN 263
V+++A +T+ G+ IH + Q+ R+ FR G + LV SD+ RG+D+ V
Sbjct: 259 VEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVASDVAARGLDIPDVG 318
Query: 264 VVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS-IPKV 322
V NF P E Y+HRIGR+GR G G + ++T D + + K + ++ +P+
Sbjct: 319 HVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKSWGFVVKMIKKDVPEFMPEG 378
Query: 323 IDPALYVARPEDMDRDNSTG 342
+ L PE+ RD TG
Sbjct: 379 LLEELETLPPEEK-RDRKTG 397
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 93/276 (33%), Positives = 151/276 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q+ + K +K GG I + + V + IATPGR++D
Sbjct: 167 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 226
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ N+ C LVLDEAD++L F+ + ++ + +RQ L++SAT+P V+
Sbjct: 227 FLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLA 286
Query: 148 EKHLKDPYEINLME-ELTLK-GVTQYYAFVQERQKVHCLNTLFSKLQI---NQSIIFCNS 202
E L+D +IN+ EL+ + Q E +K H L L ++ N++IIF +
Sbjct: 287 EDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVET 346
Query: 203 TQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAV 262
+R + L +++ G+ IH +Q R+ V ++FRSG L+ +D+ +RG+DV+ V
Sbjct: 347 KRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 406
Query: 263 NVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLIT 298
VIN+D+P +E Y+HRIGR+ R + G A T
Sbjct: 407 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 442
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 93/304 (30%), Positives = 160/304 (52%)
Query: 26 ATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRI 85
A L+++PTRELA Q ++ I+ L +K+ GG + + + V +++ATPGR+
Sbjct: 204 AVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRL 263
Query: 86 LDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKN 145
LD +D NM C LVLDEAD++L F+ + +I + +RQ L++SAT+P V+
Sbjct: 264 LDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDRQTLMFSATWPKEVRA 323
Query: 146 FMEKHLKDPYEINL--MEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQ----SIIF 199
KD +N+ +E +TQ ++E K L L + + +NQ +IIF
Sbjct: 324 LASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHI-MNQKECKTIIF 382
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
+ ++ + L + + G+ IH Q R+ V +F++G ++ +D+ RG+DV
Sbjct: 383 VETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAARGLDV 442
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
+ VIN+D+P +E Y+HRIGR+GR G A T+ + + K L +++
Sbjct: 443 DDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQTV 502
Query: 320 PKVI 323
P+ +
Sbjct: 503 PQAL 506
>UNIPROTKB|A4QYM6 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
EMBL:CM001233 GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K13181 RefSeq:XP_003712922.1
ProteinModelPortal:A4QYM6 STRING:A4QYM6 GeneID:2683645
KEGG:mgr:MGG_07718 OrthoDB:EOG4B01XM Uniprot:A4QYM6
Length = 790
Score = 417 (151.9 bits), Expect = 3.2e-38, P = 3.2e-38
Identities = 104/317 (32%), Positives = 171/317 (53%)
Query: 19 PAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLI 78
P K+ + +I+ PTRELA+Q + +LA H ++K + GG +L+ + + +I
Sbjct: 321 PKKVPTSRVVILAPTRELAIQCHAVATKLASHTDIKFCLAVGGLSLKVQESELRLRPDVI 380
Query: 79 IATPGRILDLMDKQVA-NMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSA 137
IATPGR +D M + +D +ILVLDEAD++L F L+ +++ LP RQ +L+SA
Sbjct: 381 IATPGRFIDHMRNSASFAVDTVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLFSA 440
Query: 138 TFPLTVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQ---ERQKVHCLNTLFSKLQI 193
T +V N + L P + + ++ T+ +TQ + ++ E +++ L L L
Sbjct: 441 TMTSSVDNLIRVGLNKPVRLMVDSQKKTVVTLTQEFVRLRPGREEKRMGYLVYLCKNLYT 500
Query: 194 NQSIIFCNSTQRVELLAKKITEL-GYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+ IIF +++ A+ I L G C +H M+Q R + FR G L+ +DL
Sbjct: 501 ERVIIFFRQ-KKIAHHARIIFGLLGLSCAELHGSMSQIQRIQSVEAFRDGKVSFLLATDL 559
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALH---RIE 309
+RG+D++ V+ VIN++ P+ E Y+HR+GR+ R G G AI L DR + +
Sbjct: 560 ASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAGRSGTAITLAAEPDRKVVKAAVKAG 619
Query: 310 KELGTEIKSIPKVIDPA 326
K G +I S ++ID A
Sbjct: 620 KAQGAKISS--RIIDAA 634
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 421 (153.3 bits), Expect = 3.3e-38, P = 3.3e-38
Identities = 97/314 (30%), Positives = 172/314 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
LI+ PTRELA Q + C K LN++ + GG ++D I + + +I+ TPGR++D
Sbjct: 618 LIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMID 677
Query: 88 LMDK---QVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVK 144
L+ +V N+ +VLDEAD++ F+ + ++S + +RQ +L+SATFP ++
Sbjct: 678 LLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILSNVRPDRQTVLFSATFPRNME 737
Query: 145 NFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQK----VHCLNTLFS--KLQINQSI 197
K L P EI + + +TQ E +K + L L+S + + +S+
Sbjct: 738 ALARKTLTKPIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSL 797
Query: 198 IFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGI 257
IF + + + L +++ GY C IH Q R+ DF++G+ L+ + + RG+
Sbjct: 798 IFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGL 857
Query: 258 DVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYE-DRYALH--RIEKELGT 314
DV+ + +V+N+D P E Y+HR GR+GR G+ G A+ +T + +RY++ + K+ G
Sbjct: 858 DVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQ 917
Query: 315 EI-KSIPKVIDPAL 327
E+ +++ K++D L
Sbjct: 918 EVPEAVQKLVDSFL 931
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 112/320 (35%), Positives = 175/320 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA + L + PT ELALQT ++ ++ K + +K+ G L +I
Sbjct: 155 LSQVEPANRYPQC-LCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKIS 212
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+ H++I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 213 E--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPR 268
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQER-QKVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R +K L
Sbjct: 269 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCN 328
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L+ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 329 LYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 388
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 389 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 448
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 449 HSMNILNRIQEHFNKKIERL 468
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 415 (151.1 bits), Expect = 3.6e-38, P = 3.6e-38
Identities = 103/307 (33%), Positives = 159/307 (51%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q+ E V+ GG + + + ++IATPGR++D
Sbjct: 358 LVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLID 417
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
+ N+ C LVLDEAD++L F+ + ++S + +RQ L++SAT+P VK
Sbjct: 418 FLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQLA 477
Query: 148 EKHLKDPYEINLME-ELTLK-GVTQYYAFVQERQKVHCLNTLFSKL-QINQS----IIFC 200
E L + +IN+ EL+ + Q E K L TL S + ++S IIF
Sbjct: 478 EDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFV 537
Query: 201 NSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQ 260
+ +RV+ L + I G C IH +Q+ R+ V +FRSG LV +D+ RG+DV
Sbjct: 538 ETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVD 597
Query: 261 AVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSIP 320
+ VINFD+P+ +E Y+HRIGR+GR G + T + + K L ++
Sbjct: 598 GIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNA----KQAKALVDVLREAN 653
Query: 321 KVIDPAL 327
+ I+PAL
Sbjct: 654 QEINPAL 660
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 102/320 (31%), Positives = 170/320 (53%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQ 73
L+++ P I L + PTRELA QT ++ + K N+ + R +
Sbjct: 211 LSRVDPT-IKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGSSVN--- 266
Query: 74 KVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHER 130
+++ TPG +DL+ ++ N+ K+ VLDEAD +L + +G+ D I + LP
Sbjct: 267 -AQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNML--EAQGLGDQAIRVKKALPRGV 323
Query: 131 QILLYSATFPLTVKNFMEKHLKDPYEINL-MEELTLKGVTQYYAFVQ-ERQKVHCLNTLF 188
Q++L+SATFP V+ + E+ + D + L EEL + G+ Q Y + E+ K L L+
Sbjct: 324 QLVLFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELY 383
Query: 189 SKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLV 248
L I SIIF + ++L K+ + G+ +H + R+R+ DFR G + L+
Sbjct: 384 GLLTIGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLI 443
Query: 249 CSDLFTRGIDVQAVNVVINFDFP--KMAE----TYLHRIGRSGRYGHLGIAINLITYEDR 302
+++ RGID+ +V++V+N+D P K + TYLHRIGR+GR+G +G++I+ I
Sbjct: 444 TTNVLARGIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFIHDRRS 503
Query: 303 Y-ALHRIEKELGT-EIKSIP 320
Y L I+ G E+ +P
Sbjct: 504 YDILMAIKAYFGNVEMTRVP 523
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 89/283 (31%), Positives = 148/283 (52%)
Query: 20 AKITSKATLIIVPTRELALQTSQICIELAKHL-NVKVMVTTGGTNLRDDIMRIYQKVHLI 78
A + L++ PTRELA Q + LA+ L N K++ GG + H+I
Sbjct: 67 ASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQRDSLQHAPHII 126
Query: 79 IATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSAT 138
+ATPGR+LD + K ++D LV+DEAD++L F +D VI P RQ LL+SAT
Sbjct: 127 VATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFSAT 186
Query: 139 FPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII 198
+P + + +DP I + L + Q + + K+ L L S Q + ++
Sbjct: 187 WPEAIAAISGRVQRDPLAIEIDSTDALPPIEQQFYETSSKGKIPLLQRLLSLHQPSSCVV 246
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FCN+ + + + + E+G +H + Q R++ F +G R LV +D+ RG+D
Sbjct: 247 FCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLD 306
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYED 301
++++ +V+NF+ E ++HRIGR+ R G+ G+AI+ E+
Sbjct: 307 IKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>SGD|S000001212 [details] [associations]
symbol:DBP8 "ATPase, putative RNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IMP] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001212 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:U00027 GO:GO:0030686
GO:GO:0004004 GO:GO:0000447 GO:GO:0000472 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 HOGENOM:HOG000268802
OrthoDB:EOG4PP1RW PIR:S48908 RefSeq:NP_012039.1
ProteinModelPortal:P38719 SMR:P38719 DIP:DIP-5628N IntAct:P38719
MINT:MINT-485349 STRING:P38719 PaxDb:P38719 PeptideAtlas:P38719
EnsemblFungi:YHR169W GeneID:856574 KEGG:sce:YHR169W CYGD:YHR169w
GeneTree:ENSGT00700000105515 OMA:FRNLCAI NextBio:982426
Genevestigator:P38719 GermOnline:YHR169W GO:GO:0000480
Uniprot:P38719
Length = 431
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 101/315 (32%), Positives = 163/315 (51%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGR--- 84
+++ PTRELA+Q ++ L +N++V V GG ++ + + +K H IIATPGR
Sbjct: 74 VVLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAH 133
Query: 85 -ILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILP--HERQILLYSATFPL 141
I+ D V + K LVLDEAD LL+ F L IS LP +RQ LL++AT
Sbjct: 134 HIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITD 193
Query: 142 TVKNFMEKHL---KDP---YEINLMEELTLKGVTQY-YAFVQERQKVHCLNTLFS--KLQ 192
VK+ + K P Y++ ++ + + + Y V E K L L + + +
Sbjct: 194 QVKSLQNAPVQKGKPPLFAYQVESVDNVAIPSTLKIEYILVPEHVKEAYLYQLLTCEEYE 253
Query: 193 INQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDL 252
+IIF N T E+L + + +L +H++M Q R H FR+ R L+ +D+
Sbjct: 254 NKTAIIFVNRTMTAEILRRTLKQLEVRVASLHSQMPQQERTNSLHRFRANAARILIATDV 313
Query: 253 FTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
+RG+D+ V +V+N+D P + ++HR GR+ R G +G AI+ +T D + IE +
Sbjct: 314 ASRGLDIPTVELVVNYDIPSDPDVFIHRSGRTARAGRIGDAISFVTQRDVSRIQAIEDRI 373
Query: 313 GTEIKSIPKVIDPAL 327
++ KV D A+
Sbjct: 374 NKKMTETNKVHDTAV 388
>TAIR|locus:2032910 [details] [associations]
symbol:RH36 "RNA helicase 36" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0090406 "pollen tube" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0009561 "megagametogenesis"
evidence=IMP] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
GO:GO:0009791 GO:GO:0009561 EMBL:AC006341 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
HOGENOM:HOG000268802 OMA:EVRTVEQ GO:GO:0090406 IPI:IPI00521131
PIR:G86297 RefSeq:NP_173078.1 UniGene:At.51634
ProteinModelPortal:Q9SA27 SMR:Q9SA27 PaxDb:Q9SA27 PRIDE:Q9SA27
EnsemblPlants:AT1G16280.1 GeneID:838197 KEGG:ath:AT1G16280
KEGG:dosa:Os07t0633500-00 GeneFarm:1012 TAIR:At1g16280
InParanoid:Q9SA27 PhylomeDB:Q9SA27 ProtClustDB:CLSN2679781
Genevestigator:Q9SA27 GermOnline:AT1G16280 Uniprot:Q9SA27
Length = 491
Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 102/313 (32%), Positives = 170/313 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L LN++ V GG ++ M + + H++I TPGRI
Sbjct: 130 LVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRPHIVITTPGRIKV 189
Query: 88 LMDKQ--VANM-DHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVK 144
L++ V + K LVLDEAD++L F+ L + LP RQ LL+SAT ++
Sbjct: 190 LLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQTLLFSATMTSNLQ 249
Query: 145 NFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSIIF 199
+E Y E L T+ +TQ + F + K VH L+ + K I ++IF
Sbjct: 250 ALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQMEDK-GIRSAMIF 308
Query: 200 CNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDV 259
++ + + L+ + EL +H+ +Q+ R F+SG L+ +D+ +RG+D+
Sbjct: 309 VSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDI 368
Query: 260 QAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKSI 319
V++VIN+D P+ Y+HR+GR+ R G G+A+++IT D +H+IE+E+G +++
Sbjct: 369 PTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHKIEEEVGKKMEPY 428
Query: 320 -PKVIDPALYVAR 331
KVI +L V +
Sbjct: 429 NKKVITDSLEVTK 441
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 412 (150.1 bits), Expect = 5.0e-38, P = 5.0e-38
Identities = 95/308 (30%), Positives = 163/308 (52%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
LNKL ++ +A +++ PTRELA+Q + L +++ +KV+ GG ++ D + +
Sbjct: 85 LNKLNLSQYKPQA-IVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALK 143
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+++ TPGR+ DL+ + ++D C +LDEAD++L F + ++ P Q
Sbjct: 144 SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQR 203
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKL 191
+L+SAT P VK +E+ L++P +++ T+ V Q Y V+ +K + L
Sbjct: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETE 263
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+ + SI+F + Q E LA + G+ +H + Q+ R R + G+ LV +D
Sbjct: 264 ETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATD 323
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV + V N+D P E+Y+HRIGR+GR G G AI L+ L IE+
Sbjct: 324 VVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERV 383
Query: 312 LGTEIKSI 319
+ ++ I
Sbjct: 384 TRSSMEEI 391
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 412 (150.1 bits), Expect = 5.0e-38, P = 5.0e-38
Identities = 95/308 (30%), Positives = 163/308 (52%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAKHLN-VKVMVTTGGTNLRDDIMRIY 72
LNKL ++ +A +++ PTRELA+Q + L +++ +KV+ GG ++ D + +
Sbjct: 85 LNKLNLSQYKPQA-IVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALK 143
Query: 73 QKVHLIIATPGRILDLMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQI 132
H+++ TPGR+ DL+ + ++D C +LDEAD++L F + ++ P Q
Sbjct: 144 SGAHIVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQR 203
Query: 133 LLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQKVHCLNTLFSKL 191
+L+SAT P VK +E+ L++P +++ T+ V Q Y V+ +K + L
Sbjct: 204 VLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVEKDEAMARLLETE 263
Query: 192 QINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSD 251
+ + SI+F + Q E LA + G+ +H + Q+ R R + G+ LV +D
Sbjct: 264 ETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATD 323
Query: 252 LFTRGIDVQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKE 311
+ RG+DV + V N+D P E+Y+HRIGR+GR G G AI L+ L IE+
Sbjct: 324 VVARGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERV 383
Query: 312 LGTEIKSI 319
+ ++ I
Sbjct: 384 TRSSMEEI 391
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/299 (32%), Positives = 159/299 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L K L +K V GG ++ + + +K H++IATPGR+ D
Sbjct: 74 LVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLAD 133
Query: 88 -LMDKQVANMDHCKILVLDEADKLLSQ---DFKGMLDHVISILPHERQILLYSATFPLTV 143
L ++ K LVLDEAD+LL Q DF L+ ++ +P RQ LL+SAT T+
Sbjct: 134 HLRSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTL 193
Query: 144 KNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSII 198
+ P+ E+ T+ + Q Y V E K VH + T + + II
Sbjct: 194 NELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIII 253
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F + + ++L + + + +H+ M Q R F+S + + L+ +D+ RG+D
Sbjct: 254 FTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLD 313
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIK 317
+ V VVIN + P + + Y+HR+GR+ R G GI+I ++T D + +H IE+E+ +++
Sbjct: 314 IPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDIHLVHAIEEEIKLKLQ 372
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 96/299 (32%), Positives = 159/299 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L K L +K V GG ++ + + +K H++IATPGR+ D
Sbjct: 77 LVLTPTRELAYQIAEQFRVLGKPLGLKDCVVVGGLDMVAQALELSRKPHVVIATPGRLAD 136
Query: 88 -LMDKQVANMDHCKILVLDEADKLLSQ---DFKGMLDHVISILPHERQILLYSATFPLTV 143
L ++ K LVLDEAD+LL Q DF L+ ++ +P RQ LL+SAT T+
Sbjct: 137 HLRSSNTFSLKKLKFLVLDEADRLLEQGCADFTADLEVILEAVPARRQTLLFSATLTDTL 196
Query: 144 KNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSII 198
+ P+ E+ T+ + Q Y V E K VH + T + + II
Sbjct: 197 NELKSLAMNRPFFWEAASEVRTVDELDQRYLLVPEAVKDAYLVHLIQTFQDEHEDWSIII 256
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F + + ++L + + + +H+ M Q R F+S + + L+ +D+ RG+D
Sbjct: 257 FTKTCKECQILNMMLRKFSFPSVALHSMMKQRQRFAALAKFKSSIFKILIATDVAARGLD 316
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIK 317
+ V VVIN + P + + Y+HR+GR+ R G GI+I ++T D + +H IE+E+ +++
Sbjct: 317 IPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGISITMVTQYDIHLVHAIEEEIKLKLQ 375
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 111/320 (34%), Positives = 175/320 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA + L + PT ELALQT ++ ++ K + +K+ G L +I
Sbjct: 158 LSQVEPANRHPQC-LCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG-QKIS 215
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+ H++I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 216 E--HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPR 271
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQER-QKVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R +K L
Sbjct: 272 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCN 331
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
++ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 332 IYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKV 391
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 392 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 451
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 452 HSMNILNRIQEHFNKKIERL 471
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 107/313 (34%), Positives = 169/313 (53%)
Query: 28 LIIVPTRELALQTSQICIELAKH-LNVKVMVTTGGTNLR--DDIMRIYQKVHLIIATPGR 84
L + PT ELALQT ++ + + ++V+VM G + DI + +II TPG
Sbjct: 150 LCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK-----QIIIGTPGT 204
Query: 85 ILD-LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPHERQILLYSATFP 140
+LD +++ ++ ++ VLDEAD ++ D +G D I I LP Q+LL+SATF
Sbjct: 205 VLDWCFKRKLIDLTKIRVFVLDEADVMI--DTQGFSDQSIRIQRALPSGCQMLLFSATFE 262
Query: 141 LTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQSII 198
+V F E+ + DP I L EELTL + QYY R+ K L ++ + I Q+II
Sbjct: 263 DSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQAII 322
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
FC + + + L ++ + G+ + + R + FR G + L+ +++ RGID
Sbjct: 323 FCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLITTNVCARGID 382
Query: 259 VQAVNVVINFDFP-KMAE-----TYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKEL 312
V+ V +V+NFD P AE TYLHRIGR+GR+G G+A N+I + L +I+
Sbjct: 383 VKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHF 442
Query: 313 GTEIKSI-PKVID 324
+ IK + P+ +D
Sbjct: 443 NSNIKQLDPEDMD 455
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 111/320 (34%), Positives = 175/320 (54%)
Query: 14 LNKLTPAKITSKATLIIVPTRELALQTSQICIELAK-HLNVKVMVTTGGTNLRDDIMRIY 72
L+++ PA + L + PT ELALQT ++ ++ K H +K+ G L ++
Sbjct: 152 LSRVEPADRYPQC-LCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERG-QKVS 209
Query: 73 QKVHLIIATPGRILDLMDK-QVANMDHCKILVLDEADKLLSQDFKGMLDHVISI---LPH 128
+++ +I TPG +LD K + + K+ VLDEAD +++ +G D I I LP
Sbjct: 210 EQI--VIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIAT--QGHQDQSIRIQRMLPR 265
Query: 129 ERQILLYSATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNT 186
Q+LL+SATF +V F +K + DP I L EE TL + QYY R+ K L
Sbjct: 266 NCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCN 325
Query: 187 LFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRN 246
L+ + I Q++IFC++ + LA ++++ G+ + M R V FR G +
Sbjct: 326 LYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKV 385
Query: 247 LVCSDLFTRGIDVQAVNVVINFDFP--KMA----ETYLHRIGRSGRYGHLGIAINLI-TY 299
LV +++ RGIDV+ V+VVINFD P K ETYLHRIGR+GR+G G+A+N++ +
Sbjct: 386 LVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK 445
Query: 300 EDRYALHRIEKELGTEIKSI 319
L+RI++ +I+ +
Sbjct: 446 HSMNILNRIQEHFNKKIERL 465
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 92/302 (30%), Positives = 165/302 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q ++ L K L +K + GG ++ + + +K H+++ATPGR+ D
Sbjct: 74 LVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQGLELSKKPHVVVATPGRLAD 133
Query: 88 -LMDKQVANMDHCKILVLDEADKLLSQ---DFKGMLDHVISILPHERQILLYSATFPLTV 143
+ N++ + L++DEAD+LL Q DF L+ ++S +P +RQ LL+SAT T+
Sbjct: 134 HIRSSDTINLNRIQFLIMDEADRLLEQGCTDFTKDLEVILSAVPAKRQTLLFSATLTDTL 193
Query: 144 KNFMEKHLKDPYEINLMEEL-TLKGVTQYYAFVQERQK----VHCLNTLFSKLQINQSII 198
+ + P+ ++ T++ + Q + E+ K VH + T + II
Sbjct: 194 QQLQSIAMNRPFFWEHKSDVQTVEELDQRFILTPEKVKDAYLVHLIQTFQDEHDDWSIII 253
Query: 199 FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGID 258
F N+ + ++L + E + +H+ M Q R F+S + + L+ +D+ RG+D
Sbjct: 254 FTNTCKSCQILTMMLREFNFPTISLHSMMKQRQRFANLAKFKSNVFKILIATDVAARGLD 313
Query: 259 VQAVNVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLITYEDRYALHRIEKELGTEIKS 318
+ V VVIN + P + + Y+HR+GR+ R G G++I L+T D + ++ IE++ T++K
Sbjct: 314 IPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLINAIEEQNQTKLKE 373
Query: 319 IP 320
P
Sbjct: 374 FP 375
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 411 (149.7 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 93/276 (33%), Positives = 151/276 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q+ + K +K GG I + + V + IATPGR++D
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ N+ C LVLDEAD++L F+ + ++ + +RQ L++SAT+P V+
Sbjct: 229 FLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLA 288
Query: 148 EKHLKDPYEINLME-ELTLK-GVTQYYAFVQERQKVHCLNTLFSKLQI---NQSIIFCNS 202
E L+D +IN+ EL+ + Q E +K H L L ++ N++IIF +
Sbjct: 289 EDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVET 348
Query: 203 TQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAV 262
+R + L +++ G+ IH +Q R+ V ++FRSG L+ +D+ +RG+DV+ V
Sbjct: 349 KRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 408
Query: 263 NVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLIT 298
VIN+D+P +E Y+HRIGR+ R + G A T
Sbjct: 409 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 411 (149.7 bits), Expect = 5.7e-38, P = 5.7e-38
Identities = 93/276 (33%), Positives = 151/276 (54%)
Query: 28 LIIVPTRELALQTSQICIELAKHLNVKVMVTTGGTNLRDDIMRIYQKVHLIIATPGRILD 87
L++ PTRELA Q Q+ + K +K GG I + + V + IATPGR++D
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 88 LMDKQVANMDHCKILVLDEADKLLSQDFKGMLDHVISILPHERQILLYSATFPLTVKNFM 147
++ N+ C LVLDEAD++L F+ + ++ + +RQ L++SAT+P V+
Sbjct: 229 FLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLA 288
Query: 148 EKHLKDPYEINLME-ELTLK-GVTQYYAFVQERQKVHCLNTLFSKLQI---NQSIIFCNS 202
E L+D +IN+ EL+ + Q E +K H L L ++ N++IIF +
Sbjct: 289 EDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVET 348
Query: 203 TQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRSGLCRNLVCSDLFTRGIDVQAV 262
+R + L +++ G+ IH +Q R+ V ++FRSG L+ +D+ +RG+DV+ V
Sbjct: 349 KRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDV 408
Query: 263 NVVINFDFPKMAETYLHRIGRSGRYGHLGIAINLIT 298
VIN+D+P +E Y+HRIGR+ R + G A T
Sbjct: 409 KFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFT 444
WARNING: HSPs involving 654 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 351 351 0.00078 117 3 11 22 0.47 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 904
No. of states in DFA: 590 (63 KB)
Total size of DFA: 214 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 30.71u 0.09s 30.80t Elapsed: 00:00:09
Total cpu time: 30.78u 0.10s 30.88t Elapsed: 00:00:10
Start: Thu Aug 15 10:59:58 2013 End: Thu Aug 15 11:00:08 2013
WARNINGS ISSUED: 2