BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13288
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P23128|DDX6_DROME Putative ATP-dependent RNA helicase me31b OS=Drosophila
melanogaster GN=me31B PE=1 SV=3
Length = 459
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/54 (96%), Positives = 54/54 (100%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVKNFMEKHL++PYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK
Sbjct: 239 ATFPLTVKNFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 292
>sp|Q6FQU5|DHH1_CANGA ATP-dependent RNA helicase DHH1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DHH1 PE=3 SV=1
Length = 507
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVK FM KHL PYEINLMEELTLKG+TQYYAFV+ERQK+HCLNTLFSK
Sbjct: 212 ATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSK 265
>sp|P39517|DHH1_YEAST ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=DHH1 PE=1 SV=1
Length = 506
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVK FM KHL PYEINLMEELTLKG+TQYYAFV+ERQK+HCLNTLFSK
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSK 280
>sp|A6ZXG9|DHH1_YEAS7 ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain
YJM789) GN=DHH1 PE=3 SV=1
Length = 506
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/54 (87%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVK FM KHL PYEINLMEELTLKG+TQYYAFV+ERQK+HCLNTLFSK
Sbjct: 227 ATFPLTVKEFMVKHLHKPYEINLMEELTLKGITQYYAFVEERQKLHCLNTLFSK 280
>sp|Q09181|DHH1_SCHPO Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ste13 PE=3 SV=1
Length = 485
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL VKNFM+KHL PYEINLM+ELTL+GVTQYYAFV E QKVHCLNTLFSK
Sbjct: 225 ATFPLIVKNFMDKHLNKPYEINLMDELTLRGVTQYYAFVDESQKVHCLNTLFSK 278
>sp|Q75BS4|DHH1_ASHGO ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DHH1
PE=3 SV=1
Length = 484
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 46/54 (85%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVK FM KHL PYEINLM+ELTLKG+TQYYAFV+ERQK+HCLNTLFSK
Sbjct: 210 ATFPLTVKEFMVKHLNKPYEINLMDELTLKGITQYYAFVEERQKLHCLNTLFSK 263
>sp|A3LWX3|DHH1_PICST ATP-dependent RNA helicase DHH1 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=DHH1 PE=3 SV=1
Length = 509
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
Query: 128 PKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 185
PK + S + ATFPL VK+FM+KHL PYEINLM+ELTL+G+TQYYAFV+E+QK+HCLNT
Sbjct: 201 PKNRQSLLFSATFPLAVKSFMDKHLNKPYEINLMDELTLRGITQYYAFVEEKQKLHCLNT 260
Query: 186 LFSK 189
LFSK
Sbjct: 261 LFSK 264
>sp|Q1E5R1|DHH1_COCIM ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis (strain RS)
GN=DHH1 PE=3 SV=1
Length = 512
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFP+ VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+ERQKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPMIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEERQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|A2QY39|DHH1_ASPNC ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1
Length = 505
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|Q0CBE1|DHH1_ASPTN ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dhh1 PE=3 SV=1
Length = 509
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|Q2U5A2|DHH1_ASPOR ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=dhh1 PE=3 SV=1
Length = 511
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|A1CJ18|DHH1_ASPCL ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dhh1 PE=3 SV=1
Length = 503
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|Q4WWD3|DHH1_ASPFU ATP-dependent RNA helicase dhh1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=dhh1
PE=3 SV=1
Length = 507
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|A1D8G1|DHH1_NEOFI ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1
PE=3 SV=1
Length = 507
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 58/69 (84%), Gaps = 2/69 (2%)
Query: 123 LRSLEPKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKV 180
L S PK + + ATFPL VK+F +KH+++PYEINLM+ELTL+G+TQYYAFV+E+QKV
Sbjct: 213 LLSFHPKDRQVMLFSATFPLIVKSFKDKHMRNPYEINLMDELTLRGITQYYAFVEEKQKV 272
Query: 181 HCLNTLFSK 189
HCLNTLFSK
Sbjct: 273 HCLNTLFSK 281
>sp|P54823|DDX6_MOUSE Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6
PE=2 SV=1
Length = 483
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 331
>sp|Q5ZKB9|DDX6_CHICK Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus GN=DDX6
PE=2 SV=1
Length = 483
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 331
>sp|Q5RFQ5|DDX6_PONAB Probable ATP-dependent RNA helicase DDX6 OS=Pongo abelii GN=DDX6
PE=2 SV=1
Length = 483
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 331
>sp|P26196|DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens GN=DDX6
PE=1 SV=2
Length = 483
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 331
>sp|Q0IHV9|DDX6_XENTR Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis
GN=ddx6 PE=2 SV=1
Length = 481
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 277 ATFPLSVQKFMTSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 330
>sp|A5DIP0|DHH1_PICGU ATP-dependent RNA helicase DHH1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DHH1 PE=3 SV=1
Length = 547
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
Query: 128 PKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 185
PK + S + ATFPL VK+FM+KHL PYEINLM+ELTL+G++Q+YAFV+E+QK+HCLNT
Sbjct: 200 PKNRQSLLFSATFPLAVKSFMDKHLNKPYEINLMDELTLRGISQFYAFVEEKQKLHCLNT 259
Query: 186 LFSK 189
LFSK
Sbjct: 260 LFSK 263
>sp|Q9WTM2|DDX6_CAVPO Probable ATP-dependent RNA helicase DDX6 (Fragment) OS=Cavia
porcellus GN=DDX6 PE=2 SV=1
Length = 472
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 51/65 (78%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKCCSLLG 195
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLF + +
Sbjct: 267 ATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFPRLQTNQS 326
Query: 196 VFTCT 200
+ C
Sbjct: 327 IIFCN 331
>sp|P54824|DDX6_XENLA ATP-dependent RNA helicase ddx6 OS=Xenopus laevis GN=ddx6 PE=1 SV=2
Length = 481
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+V+ FM HL+ PYEINLMEELTLKGVTQYYA+V ERQKVHCLNTLFS+
Sbjct: 277 ATFPLSVQKFMTLHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSR 330
>sp|A7TGU7|DHH1_VANPO ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1
Length = 484
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/64 (71%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
Query: 128 PKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 185
PK S + ATFPL+VK FM HL PYEINLM+ELTLKG+TQYYAFV+E+QK+HCLNT
Sbjct: 205 PKNHQSLLFSATFPLSVKEFMVNHLHKPYEINLMDELTLKGITQYYAFVEEKQKLHCLNT 264
Query: 186 LFSK 189
LFSK
Sbjct: 265 LFSK 268
>sp|Q5AAW3|DHH1_CANAL ATP-dependent RNA helicase DHH1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DHH1 PE=3 SV=1
Length = 549
Score = 97.1 bits (240), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 51/54 (94%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL VK+FM+KHL PYEINLM+ELTLKG++Q+YAFV+E+QK+HCLNTLFSK
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLMDELTLKGISQFYAFVEEKQKLHCLNTLFSK 264
>sp|A6RY31|DHH1_BOTFB ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain
B05.10) GN=dhh1 PE=3 SV=1
Length = 538
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 52/54 (96%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK+F +K++ DPYEINLM+ELTL+G+TQ+YAFV+E++KVHCLNTLFSK
Sbjct: 228 ATFPMTVKDFSDKNMADPYEINLMDELTLRGITQFYAFVEEKEKVHCLNTLFSK 281
>sp|Q6CSZ7|DHH1_KLULA ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=DHH1 PE=3 SV=1
Length = 514
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 52/54 (96%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK FM KHLK+P+EINLM+ELTLKG++Q+YAFV+E+QK+HCLNTLFSK
Sbjct: 217 ATFPVTVKEFMVKHLKNPHEINLMDELTLKGISQFYAFVEEKQKLHCLNTLFSK 270
>sp|Q109G2|RH12_ORYSJ DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp.
japonica GN=Os10g0503700 PE=2 SV=2
Length = 521
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK+F EK+L PY INLM+ELTLKG+TQYYAFV+ERQKVHCLNTLFSK
Sbjct: 328 ATFPVTVKDFKEKYLPRPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFSK 381
>sp|Q7S5D9|DHH1_NEUCR ATP-dependent RNA helicase dhh-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dhh-1 PE=3 SV=2
Length = 505
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 51/54 (94%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+VK+F +K++ PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLFSK
Sbjct: 226 ATFPLSVKDFSDKNMTSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSK 279
>sp|Q6C0X2|DHH1_YARLI ATP-dependent RNA helicase DHH1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DHH1 PE=3 SV=1
Length = 522
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPLTVK FM+++L PYEINLM+ELTL+G+TQYYAFV E+QK+HCLNTLFSK
Sbjct: 209 ATFPLTVKAFMDRNLHKPYEINLMDELTLRGITQYYAFVDEKQKLHCLNTLFSK 262
>sp|Q95YF3|CGH1_CAEEL ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans GN=cgh-1
PE=1 SV=1
Length = 430
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP TV +FM+KH+ PYEINLMEELTL GVTQYYAFVQE+QKVHCLNTLF K
Sbjct: 224 ATFPNTVTSFMQKHMHKPYEINLMEELTLLGVTQYYAFVQEKQKVHCLNTLFRK 277
>sp|Q0U7S9|DHH1_PHANO ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DHH1 PE=3 SV=1
Length = 522
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+ VK F +KH+ PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLF+K
Sbjct: 230 ATFPIVVKTFKDKHMNSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFNK 283
>sp|Q6BJX6|DHH1_DEBHA ATP-dependent RNA helicase DHH1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DHH1 PE=3 SV=2
Length = 516
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 56/64 (87%), Gaps = 2/64 (3%)
Query: 128 PKTKVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNT 185
P T+ S + ATFPL VK+FM++HL PYEINLM+ELTL+G++Q+YAFV+E+QK+HCLNT
Sbjct: 201 PTTRQSLLFSATFPLAVKSFMDQHLTKPYEINLMDELTLRGISQFYAFVEEKQKLHCLNT 260
Query: 186 LFSK 189
LFSK
Sbjct: 261 LFSK 264
>sp|Q58Z64|DHH1_CRYNH ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=VAD1 PE=2 SV=1
Length = 616
Score = 95.9 bits (237), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP TVK F ++H+ PYEINLM+ELTLKGVTQYYA+V+E QKVHCLNTLFSK
Sbjct: 218 ATFPWTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVEESQKVHCLNTLFSK 271
>sp|A4R715|DHH1_MAGO7 ATP-dependent RNA helicase DHH1 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DHH1 PE=3 SV=2
Length = 535
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 51/54 (94%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP++VK F +K++ +PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLFSK
Sbjct: 228 ATFPISVKEFSDKNMTNPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSK 281
>sp|Q4HW67|DHH1_GIBZE ATP-dependent RNA helicase DHH1 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DHH1 PE=3
SV=1
Length = 486
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 51/54 (94%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFPL+VK+F +K++ PYEINLM+ELTL+G+TQYYAFV+E+QKVHCLNTLFSK
Sbjct: 223 ATFPLSVKDFSDKNMVSPYEINLMDELTLRGITQYYAFVEEKQKVHCLNTLFSK 276
>sp|Q54E49|DDX6_DICDI Probable ATP-dependent RNA helicase ddx6 OS=Dictyostelium
discoideum GN=ddx6 PE=3 SV=1
Length = 423
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK+F E +L+ +EINLMEELTLKGVTQYYAFV+ERQK+HCLNTLFSK
Sbjct: 230 ATFPVTVKSFKEHYLQQAFEINLMEELTLKGVTQYYAFVEERQKIHCLNTLFSK 283
>sp|P0CQ80|DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DHH1 PE=3 SV=1
Length = 625
Score = 95.1 bits (235), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP TVK F ++H+ PYEINLM+ELTLKGVTQYYA+V+E QKVHCLNTLFSK
Sbjct: 218 ATFPWTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVEESQKVHCLNTLFSK 271
>sp|P0CQ81|DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DHH1 PE=3 SV=1
Length = 625
Score = 95.1 bits (235), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/54 (77%), Positives = 48/54 (88%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP TVK F ++H+ PYEINLM+ELTLKGVTQYYA+V+E QKVHCLNTLFSK
Sbjct: 218 ATFPWTVKEFKDQHMVQPYEINLMDELTLKGVTQYYAYVEESQKVHCLNTLFSK 271
>sp|Q2GQ93|DHH1_CHAGB ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DHH1 PE=3 SV=1
Length = 512
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 51/54 (94%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP++VK+F +K++ PYEINLM+ELTL+G+TQYYA+V+E+QKVHCLNTLFSK
Sbjct: 192 ATFPISVKDFSDKNMTSPYEINLMDELTLRGITQYYAYVEEKQKVHCLNTLFSK 245
>sp|Q9M2E0|RH12_ARATH DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana
GN=RH12 PE=2 SV=1
Length = 498
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK F ++HL+ PY INLM++LTL GVTQYYAFV+ERQKVHCLNTLFSK
Sbjct: 305 ATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSK 358
>sp|Q6H7S2|RH8_ORYSJ DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp.
japonica GN=Os02g0641800 PE=2 SV=2
Length = 508
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK F +K+L PY INLM+ELTLKG+TQ+YAFV+ERQKVHCLNTLFSK
Sbjct: 315 ATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSK 368
>sp|Q7XMK8|RH6_ORYSJ DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp.
japonica GN=Os04g0533000 PE=2 SV=1
Length = 498
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK F +K+L PY INLM+ELTLKG+TQ+YAFV+ERQKVHCLNTLFSK
Sbjct: 305 ATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSK 358
>sp|Q94BV4|RH6_ARATH DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana
GN=RH6 PE=2 SV=2
Length = 528
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK+F +++LK PY INLM++LTL GVTQYYAFV+ERQKVHCLNTLFSK
Sbjct: 335 ATFPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSK 388
>sp|Q8RXK6|RH8_ARATH DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana
GN=RH8 PE=2 SV=1
Length = 505
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 50/54 (92%)
Query: 136 ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSK 189
ATFP+TVK+F ++ L +PY INLM+ELTLKG+TQ+YAFV+ERQK+HCLNTLFSK
Sbjct: 312 ATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCLNTLFSK 365
>sp|Q8SQK9|DHH1_ENCCU ATP-dependent RNA helicase DHH1 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=DHH1 PE=3 SV=1
Length = 489
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 28 SQLTVQELSLRLVMCVIFREVLLKISSWEKVNLPLYVESQGTSKFRSFGKGDIFNAGSVS 87
+ + ELS++ ++ V RE+ L+IS K S+GT + G +
Sbjct: 168 NMINSSELSIQGIILVPIRELALQISRNVKR------MSEGTGVISAPVVGGTSMQDDII 221
Query: 88 RITRHTFAMTPSVGPIVD---RKFGQIFNGQILVPKHVLRSLE--------------PKT 130
R++ M + G IVD ++ G + ILV + L+ P+
Sbjct: 222 RVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVTKLLDLLPRE 281
Query: 131 KVSAI--ATFPLTVKNFMEKHLKDPYEINLMEELTLKGVTQYYAFVQ 175
K + ATFP V F+ +++K+P INLM+EL GV Q+Y +V+
Sbjct: 282 KQMLLYSATFPYFVTGFIRRYMKNPLCINLMKELAPVGVKQFYTYVK 328
>sp|Q6CXT4|IF4A_KLULA ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=TIF1 PE=3 SV=1
Length = 396
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 121 HVLRSLEPKTKVSAI-ATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ 178
++ L P ++V + AT P V K +KDP I + +ELTL+G+ QYY V+E Q
Sbjct: 187 NIFTMLPPTSQVVLLSATMPGDVLEVTSKFMKDPVRILVKKDELTLEGIGQYYVNVEEEQ 246
Query: 179 -KVHCLNTLFSKCCSLLGVFTCT 200
K CL L+ V C
Sbjct: 247 YKYDCLTDLYDSISVTQAVIFCN 269
>sp|Q6FQQ6|IF4A_CANGA ATP-dependent RNA helicase eIF4A OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=TIF1 PE=3 SV=1
Length = 396
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 121 HVLRSLEPKTKVSAI-ATFPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ 178
+ L P T+V + AT P V K +++P I + +ELTL+G+ Q+Y V+E Q
Sbjct: 187 QIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQ 246
Query: 179 -KVHCLNTLFSKCCSLLGVFTCT 200
K CL L+ V C
Sbjct: 247 FKYDCLTDLYDSISVTQAVIFCN 269
>sp|Q9P735|FAL1_NEUCR ATP-dependent RNA helicase fal-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=fal-1 PE=3 SV=2
Length = 400
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 104 VDRKFGQIFNGQILVPKHVLRSLEPKTKVSAI-ATFPLTVKNFMEKHLKDPYEINL-MEE 161
D Q F QI V R L P T+V + AT P V + K + DP I + +E
Sbjct: 177 ADELLNQGFREQIY---DVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDE 233
Query: 162 LTLKGVTQYYAFVQERQKVHCLNTLFSKCCSLLGVFTCT 200
LTL+G+ QY+ V++ + F C L T T
Sbjct: 234 LTLEGLKQYFIAVEKE------DWKFDTLCDLYDTLTIT 266
>sp|Q2GWJ5|FAL1_CHAGB ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=FAL1 PE=3 SV=1
Length = 394
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 104 VDRKFGQIFNGQILVPKHVLRSLEPKTKVSAI-ATFPLTVKNFMEKHLKDPYEINL-MEE 161
D Q F QI V R L P T+V + AT P V + K + DP I + +E
Sbjct: 178 ADELLNQGFREQIY---DVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDE 234
Query: 162 LTLKGVTQYYAFVQERQKVHCLNTLFSKCCSLLGVFTCT 200
LTL+G+ QY+ V++ + F C L T T
Sbjct: 235 LTLEGLKQYFIAVEKE------DWKFDTLCDLYDTLTIT 267
>sp|A7TK55|IF4A_VANPO ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1
Length = 396
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 84 GSVS-RITRHTFAMTPSVGPIV----DRKFGQIFNGQILVPKHVLRSLEPKTKVSAI-AT 137
G VS I RH F T ++ + D F QI + L P T+V + AT
Sbjct: 149 GRVSDNIQRHRFK-TDNIKMFILDEADEMLSSGFREQIY---QIFTMLPPTTQVVLLSAT 204
Query: 138 FPLTVKNFMEKHLKDPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKCCSLLG 195
P V K +++P I + +ELTL+G+ Q+Y V+E Q K CL+ L+
Sbjct: 205 LPGDVLEVTTKFMRNPIRILVKKDELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQA 264
Query: 196 VFTCT 200
V C
Sbjct: 265 VIFCN 269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,860,334
Number of Sequences: 539616
Number of extensions: 2587729
Number of successful extensions: 7511
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 7442
Number of HSP's gapped (non-prelim): 225
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)