BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1329
(465 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156553811|ref|XP_001604171.1| PREDICTED: ribosome maturation protein SBDS-like [Nasonia
vitripennis]
Length = 252
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/297 (60%), Positives = 211/297 (71%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTP NQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +E
Sbjct: 1 MSKIFTPVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFMNVSKGQVAKKEDLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +DQTEICK IL KGELQ+SDKER S +++ FKDIAT V++KC+N E+KRP++VS+I
Sbjct: 75 AFGKDDQTEICKEILEKGELQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IHFSV N+N+KQQALEVI LK M +ERAQMR+RV VS K+ +KL+EK+V
Sbjct: 135 EKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSG--KEARKLREKIV 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K T VE+E+W+ G L L+CLIDPG YREIDELVR ET+G G LELLNLKE+TEGEE
Sbjct: 193 KLTTKVESEDWNSGSLDLVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGEE 249
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 81/91 (89%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTP NQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +EKDIDEVLQTHTVF N
Sbjct: 1 MSKIFTPVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFMN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF +DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLIKAFGKDDQTEICKEILEK 91
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER S +++ FKDIAT V++KC+N E+KRP++VS+IE +K IHFSV
Sbjct: 87 EILEKGELQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQALE
Sbjct: 147 PNRNAKQQALE 157
>gi|383854215|ref|XP_003702617.1| PREDICTED: ribosome maturation protein SBDS-like [Megachile
rotundata]
Length = 252
Score = 352 bits (904), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 209/297 (70%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKV+SWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVVSWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFINVSKGQVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T++ TEICK IL KGELQ+SDKER S +++ FKDIAT V++KC+N ETKRP+ V+MI
Sbjct: 75 AFGTDNPTEICKEILTKGELQVSDKERHSALDSMFKDIATTVADKCVNPETKRPYPVTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K +HFSV N+N+KQQAL+VIP LK M +ERAQMR+RV VS K+ KKL++K++
Sbjct: 135 EKAMKDVHFSVKPNRNAKQQALDVIPQLKAIMPLERAQMRLRVLVSG--KEAKKLRDKII 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K T +E EEW G L LICLIDPG YREI ELVR+ET+G G LELLNLKEV EG+E
Sbjct: 193 KLITKIETEEWDNGTLDLICLIDPGHYREISELVRSETKGSGLLELLNLKEVVEGDE 249
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKV+SWRN +EKDIDEVLQTHTVF N
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF T++ TEICK IL K
Sbjct: 61 VSKGQVAKKEDLVKAFGTDNPTEICKEILTK 91
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER S +++ FKDIAT V++KC+N ETKRP+ V+MIE +K +HFSV
Sbjct: 87 EILTKGELQVSDKERHSALDSMFKDIATTVADKCVNPETKRPYPVTMIEKAMKDVHFSVK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 PNRNAKQQALD 157
>gi|48129273|ref|XP_396646.1| PREDICTED: ribosome maturation protein SBDS-like [Apis mellifera]
Length = 255
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 178/300 (59%), Positives = 210/300 (70%), Gaps = 48/300 (16%)
Query: 90 MKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTV 149
M SKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +E
Sbjct: 1 MSKTSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLE------------ 48
Query: 150 FTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKED 209
KDIDEVLQTHTVF NVSKGQ A KED
Sbjct: 49 ----------------------------------KDIDEVLQTHTVFINVSKGQVAKKED 74
Query: 210 LKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTV 269
L KAF T++QTEICK IL KGELQ+SDKER S +++ FKDIAT V+ KCIN ETKRP+T+
Sbjct: 75 LIKAFGTDNQTEICKEILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTI 134
Query: 270 SMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKE 329
+MIE +K +HFSV N+N+KQQAL+VIP LK M +ERAQMR+RV VS K+ KKL++
Sbjct: 135 TMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLRVLVSG--KEAKKLRD 192
Query: 330 KLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K+ K T +E EEW G L L+CLIDPG YREI+ELVR+ET+G G LELLNLKE+ EG+E
Sbjct: 193 KIEKLVTKLETEEWDNGTLDLVCLIDPGHYREINELVRSETKGSGLLELLNLKEIVEGDE 252
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 82/90 (91%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
SKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +EKDIDEVLQTHTVF NV
Sbjct: 5 SKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFINV 64
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A KEDL KAF T++QTEICK IL K
Sbjct: 65 SKGQVAKKEDLIKAFGTDNQTEICKEILTK 94
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER S +++ FKDIAT V+ KCIN ETKRP+T++MIE +K +HFSV
Sbjct: 90 EILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTITMIEKAMKDVHFSVK 149
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 150 PNRNAKQQALD 160
>gi|380023259|ref|XP_003695442.1| PREDICTED: LOW QUALITY PROTEIN: ribosome maturation protein
SBDS-like [Apis florea]
Length = 255
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/300 (59%), Positives = 209/300 (69%), Gaps = 48/300 (16%)
Query: 90 MKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTV 149
M SKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +E
Sbjct: 1 MSKSSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLE------------ 48
Query: 150 FTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKED 209
KDIDEVLQTHTVF NVSKGQ A KED
Sbjct: 49 ----------------------------------KDIDEVLQTHTVFINVSKGQVAKKED 74
Query: 210 LKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTV 269
L KAF T++QTEICK IL KGELQ+SDKER S +++ FKDIAT V+ KCIN ETKRP+T+
Sbjct: 75 LIKAFGTDNQTEICKEILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTI 134
Query: 270 SMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKE 329
+MIE +K +HFSV N+N+KQQAL+VIP LK M +ERAQMR+RV V K+ KKL++
Sbjct: 135 TMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLRVLVXG--KEAKKLRD 192
Query: 330 KLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K+ K T +E EEW G L LICLIDPG YREI+ELVR+ET+G G LELLNLKE+ EG+E
Sbjct: 193 KIEKLVTKLETEEWDNGTLDLICLIDPGHYREINELVRSETKGSGLLELLNLKEIVEGDE 252
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 82/90 (91%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
SKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +EKDIDEVLQTHTVF NV
Sbjct: 5 SKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFINV 64
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A KEDL KAF T++QTEICK IL K
Sbjct: 65 SKGQVAKKEDLIKAFGTDNQTEICKEILTK 94
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER S +++ FKDIAT V+ KCIN ETKRP+T++MIE +K +HFSV
Sbjct: 90 EILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTITMIEKAMKDVHFSVK 149
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 150 PNRNAKQQALD 160
>gi|350423297|ref|XP_003493435.1| PREDICTED: ribosome maturation protein SBDS-like [Bombus impatiens]
Length = 252
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 178/297 (59%), Positives = 208/297 (70%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFINVSKGQVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T+DQTEICK IL KGELQ+SDKER +++ FKDIAT V+ KCIN ETKRP+TV+MI
Sbjct: 75 AFGTDDQTEICKEILTKGELQVSDKERHLALDSMFKDIATTVANKCINPETKRPYTVTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IHFSV N+N+KQQAL+VIP L+ M +ERAQMR+RV S K+ KK+++K+V
Sbjct: 135 EKAMKDIHFSVKPNRNAKQQALDVIPQLQTIMPLERAQMRLRVLASG--KEAKKIRDKIV 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K T +E EEW G L LICLIDPG YREI+ELV +ET+G G LELLNLKE+ EG+E
Sbjct: 193 KSITKLETEEWDNGTLNLICLIDPGHYREINELVTSETKGSGLLELLNLKEIVEGDE 249
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 83/91 (91%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +EKDIDEVLQTHTVF N
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF T+DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLVKAFGTDDQTEICKEILTK 91
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER +++ FKDIAT V+ KCIN ETKRP+TV+MIE +K IHFSV
Sbjct: 87 EILTKGELQVSDKERHLALDSMFKDIATTVANKCINPETKRPYTVTMIEKAMKDIHFSVK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 PNRNAKQQALD 157
>gi|340719099|ref|XP_003397994.1| PREDICTED: ribosome maturation protein SBDS-like [Bombus
terrestris]
Length = 255
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 177/297 (59%), Positives = 207/297 (69%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFINVSKGQVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T+DQTEICK IL KGELQ+SDKER +++ FKDIAT V+ KCIN ETKRP+TV+MI
Sbjct: 75 AFGTDDQTEICKEILTKGELQVSDKERHLALDSMFKDIATTVANKCINPETKRPYTVTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K HFSV N+N+KQQAL+VIP L+ M +ERAQMR+RV S K+ KK+++K+V
Sbjct: 135 EKAMKDTHFSVKPNRNAKQQALDVIPQLQTIMPLERAQMRLRVLASG--KEAKKIRDKIV 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K T +E EEW G L LICLIDPG YREI+ELV +ET+G G LELLNLKE+ EG+E
Sbjct: 193 KSITKLETEEWDNGTLNLICLIDPGHYREINELVTSETKGSGLLELLNLKEIVEGDE 249
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 83/91 (91%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACY+NKVISWRN +EKDIDEVLQTHTVF N
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF T+DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLVKAFGTDDQTEICKEILTK 91
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 52/71 (73%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER +++ FKDIAT V+ KCIN ETKRP+TV+MIE +K HFSV
Sbjct: 87 EILTKGELQVSDKERHLALDSMFKDIATTVANKCINPETKRPYTVTMIEKAMKDTHFSVK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 PNRNAKQQALD 157
>gi|332025015|gb|EGI65202.1| Ribosome maturation protein SBDS [Acromyrmex echinatior]
Length = 253
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 173/298 (58%), Positives = 208/298 (69%), Gaps = 49/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACYKNKV+SWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYKNKVVSWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHT+FTNVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTIFTNVSKGQVAKKEDLMK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF TEDQT+ICK IL KGELQ+SDKER +E+ FKDIAT V+ KCIN ETKRP+ V+MI
Sbjct: 75 AFETEDQTKICKQILAKGELQVSDKERHLALESMFKDIATTVASKCINPETKRPYPVTMI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E ++ +IHFSV N+N+KQQAL+VI LK+ M +ER QMR+++ + K+ +KLK+K+
Sbjct: 135 ENAMRDEIHFSVKPNRNAKQQALDVISQLKEVMPLERVQMRLKIVIPE--KEARKLKDKV 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VK AT +E EEW G L +ICLIDPG+YR IDEL+R+ET+G LEL+NL EV EGEE
Sbjct: 193 VKFATKMETEEWDNGSLTIICLIDPGQYRGIDELIRSETKGTALLELVNLNEVVEGEE 250
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKKAGKRFEIACYKNKV+SWRN +EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKAGKRFEIACYKNKVVSWRNKLEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF TEDQT+ICK IL K
Sbjct: 61 VSKGQVAKKEDLMKAFETEDQTKICKQILAK 91
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK-QIHFSV 435
++L E+ ++ER +E+ FKDIAT V+ KCIN ETKRP+ V+MIE ++ +IHFSV
Sbjct: 87 QILAKGELQVSDKERHLALESMFKDIATTVASKCINPETKRPYPVTMIENAMRDEIHFSV 146
Query: 436 NVNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 KPNRNAKQQALD 158
>gi|322787074|gb|EFZ13298.1| hypothetical protein SINV_15393 [Solenopsis invicta]
Length = 288
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 173/302 (57%), Positives = 208/302 (68%), Gaps = 49/302 (16%)
Query: 89 LMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHT 148
L MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWRN
Sbjct: 32 LAAKMSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRNK------------- 78
Query: 149 VFTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKE 208
+EKDIDEVLQTHT+FTNVSKGQ A KE
Sbjct: 79 ---------------------------------QEKDIDEVLQTHTIFTNVSKGQVAKKE 105
Query: 209 DLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFT 268
DL KAF TEDQTEICK IL KGELQ+SDKER +E+ FKDIAT V+ KCIN ETK P+
Sbjct: 106 DLLKAFETEDQTEICKQILAKGELQVSDKERHLALESMFKDIATTVASKCINPETKHPYP 165
Query: 269 VSMIEAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKL 327
V+MIE ++ +IHFSV N+N+KQQAL+VI LK+ M +ER QMR+R+ ++ K+ +KL
Sbjct: 166 VTMIENAMRDEIHFSVKPNRNAKQQALDVISQLKEVMPLERVQMRLRIVIAE--KEARKL 223
Query: 328 KEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
K+K+VK T +E EEW G L +ICLIDPG+YR +DEL+R+ET+G G LEL+NL EV EG
Sbjct: 224 KDKVVKLMTKMETEEWDNGSLTIICLIDPGQYRAVDELIRSETKGTGLLELVNLNEVVEG 283
Query: 388 EE 389
EE
Sbjct: 284 EE 285
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWRN EKDIDEVLQTHT+FTN
Sbjct: 36 MSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRNKQEKDIDEVLQTHTIFTN 95
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF TEDQTEICK IL K
Sbjct: 96 VSKGQVAKKEDLLKAFETEDQTEICKQILAK 126
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 368 TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
TE + + ++L E+ ++ER +E+ FKDIAT V+ KCIN ETK P+ V+MIE
Sbjct: 113 TEDQTEICKQILAKGELQVSDKERHLALESMFKDIATTVASKCINPETKHPYPVTMIENA 172
Query: 428 LK-QIHFSVNVNKNSKQQALE 447
++ +IHFSV N+N+KQQAL+
Sbjct: 173 MRDEIHFSVKPNRNAKQQALD 193
>gi|357615518|gb|EHJ69704.1| hypothetical protein KGM_05560 [Danaus plexippus]
Length = 251
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/297 (56%), Positives = 209/297 (70%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACY+NKV+SWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYRNKVVSWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFLNVSKGQVAKKEDLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F +DQTEICK IL KGELQ+SDKER SQI++ FKDIAT V++KCIN ETKRP+ VS+I
Sbjct: 75 IFGKDDQTEICKEILEKGELQVSDKERQSQIDSLFKDIATTVADKCINPETKRPYPVSII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IHFSVNVNK++KQQ+L+VI +K+ + +ERAQMRVR+++ KD +K+++K+V
Sbjct: 135 EKAMKDIHFSVNVNKSAKQQSLDVIQLIKKEIPLERAQMRVRIQLQG--KDARKIRDKVV 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K T+VE+E W G LICLIDPG +R +DE++RT+T+G G ELLNLKE+ EGE+
Sbjct: 193 KLVTNVEDESWDSGTANLICLIDPGSFRNLDEMIRTDTKGNGQFELLNLKEMIEGEQ 249
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 80/91 (87%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACY+NKV+SWRN +EKDIDEVLQTHTVF N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL K F +DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLIKIFGKDDQTEICKEILEK 91
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 57/71 (80%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER SQI++ FKDIAT V++KCIN ETKRP+ VS+IE +K IHFSVN
Sbjct: 87 EILEKGELQVSDKERQSQIDSLFKDIATTVADKCINPETKRPYPVSIIEKAMKDIHFSVN 146
Query: 437 VNKNSKQQALE 447
VNK++KQQ+L+
Sbjct: 147 VNKSAKQQSLD 157
>gi|193676604|ref|XP_001943727.1| PREDICTED: ribosome maturation protein SBDS-like [Acyrthosiphon
pisum]
Length = 252
Score = 334 bits (856), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 165/296 (55%), Positives = 210/296 (70%), Gaps = 48/296 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWRN IE
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKNGKRFEIACYKNKVVSWRNGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTH+VFTNVSKGQ A KEDL+K
Sbjct: 46 -------------------------------KDIDEVLQTHSVFTNVSKGQVAKKEDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F+T++ T+ICK IL KGELQISDKERS+Q++ +KDIATIV++KC+N ETKRP++V+MI
Sbjct: 75 IFDTDNSTDICKHILEKGELQISDKERSAQLDASYKDIATIVADKCVNPETKRPYSVTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K +H+SV N+NSKQQAL+VI +K + ++RA MR++VE ++ KD KKLKEK V
Sbjct: 135 EKAMKDVHYSVKPNRNSKQQALDVIRLIKTVLPLDRAMMRLKVESTS--KDAKKLKEKFV 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
A+SVE+E W G + L+ LIDPG YR+IDELVR++++G +E+L+LKEV EG+
Sbjct: 193 ALASSVESENWDSGEITLVLLIDPGNYRQIDELVRSDSKGTTQMEVLSLKEVVEGD 248
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 83/91 (91%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWRN IEKDIDEVLQTH+VFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKNGKRFEIACYKNKVVSWRNGIEKDIDEVLQTHSVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL+K F+T++ T+ICK IL K
Sbjct: 61 VSKGQVAKKEDLQKIFDTDNSTDICKHILEK 91
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
+L E+ ++ERS+Q++ +KDIATIV++KC+N ETKRP++V+MIE +K +H+SV
Sbjct: 87 HILEKGELQISDKERSAQLDASYKDIATIVADKCVNPETKRPYSVTMIEKAMKDVHYSVK 146
Query: 437 VNKNSKQQALE 447
N+NSKQQAL+
Sbjct: 147 PNRNSKQQALD 157
>gi|307170873|gb|EFN62984.1| Ribosome maturation protein SBDS [Camponotus floridanus]
Length = 253
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/298 (57%), Positives = 203/298 (68%), Gaps = 49/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKVISWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVISWRNKLE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHT+FTNVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTIFTNVSKGQVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +DQTEICK IL KGELQ+SDKER +++ FKDIAT V+ KCIN ETK P+ VSMI
Sbjct: 75 AFGIDDQTEICKQILAKGELQVSDKERHLALDSMFKDIATTVASKCINPETKHPYPVSMI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E ++ +IHFSV N+N+KQQAL+VI LK+ M +ERAQMR+R+ + K+ +KLK+K+
Sbjct: 135 ENAMREEIHFSVKPNRNAKQQALDVISQLKEVMPLERAQMRLRIVIPE--KEARKLKDKI 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VK T +E E+W G L + CLIDPG+YR IDE VR+ET+G LEL+NL EV EGEE
Sbjct: 193 VKFITKMETEKWENGSLTITCLIDPGQYRGIDETVRSETKGTALLELVNLNEVIEGEE 250
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKVISWRN +EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVISWRNKLEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF +DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLVKAFGIDDQTEICKQILAK 91
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK-QIHFSV 435
++L E+ ++ER +++ FKDIAT V+ KCIN ETK P+ VSMIE ++ +IHFSV
Sbjct: 87 QILAKGELQVSDKERHLALDSMFKDIATTVASKCINPETKHPYPVSMIENAMREEIHFSV 146
Query: 436 NVNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 KPNRNAKQQALD 158
>gi|242012666|ref|XP_002427050.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511298|gb|EEB14312.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 252
Score = 328 bits (842), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/297 (58%), Positives = 209/297 (70%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACY+NKV+SWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYRNKVLSWRNKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHT+FTNVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQTHTIFTNVSKGQVAKKEDLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +DQTEICK IL KGELQ+SDKER +Q E+ FKDIAT +SEKC+N +TKRP+ VSMI
Sbjct: 75 AFGKDDQTEICKEILAKGELQVSDKERHNQFESLFKDIATTISEKCVNPDTKRPYPVSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K+IHFS+ N+N+KQQAL+ IP LK+ + +ERAQMR++ + + K+ KKLKEK++
Sbjct: 135 EKAMKEIHFSIKPNRNAKQQALDAIPQLKEAIPLERAQMRLK--IVSDCKESKKLKEKVL 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K + +E EEW L +ICLIDPG +REIDELVRTET+G G LELLNLKEV EG+E
Sbjct: 193 KLTSKIEEEEWIDNQLTMICLIDPGYFREIDELVRTETKGNGNLELLNLKEVLEGDE 249
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKK GKRFEIACY+NKV+SWRN +EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYRNKVLSWRNKVEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF +DQTEICK IL K
Sbjct: 61 VSKGQVAKKEDLIKAFGKDDQTEICKEILAK 91
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER +Q E+ FKDIAT +SEKC+N +TKRP+ VSMIE +K+IHFS+
Sbjct: 87 EILAKGELQVSDKERHNQFESLFKDIATTISEKCVNPDTKRPYPVSMIEKAMKEIHFSIK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQAL+
Sbjct: 147 PNRNAKQQALD 157
>gi|389613021|dbj|BAM19898.1| similar to CG8549, partial [Papilio xuthus]
Length = 247
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 204/293 (69%), Gaps = 48/293 (16%)
Query: 97 FTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG 156
FTPTNQIR+TNVAIVR+KK GKR+EIACY+NKV+SWRN +E
Sbjct: 1 FTPTNQIRLTNVAIVRLKKGGKRYEIACYRNKVLSWRNKLE------------------- 41
Query: 157 QAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNT 216
KDIDEVLQTHTVFTNVSKGQ A KEDL K F T
Sbjct: 42 ---------------------------KDIDEVLQTHTVFTNVSKGQVAKKEDLVKIFGT 74
Query: 217 EDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 276
++QTEICK IL KGELQ+SDKER SQI++ FKDIAT V++KC+N ETKRP+ VS+IE +
Sbjct: 75 DNQTEICKEILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAM 134
Query: 277 KQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
K HFSVNVN+++KQQAL+VI +K+ + +ERAQMRVR ++ G KD KK+ EK VK AT
Sbjct: 135 KDTHFSVNVNRSAKQQALDVIQMIKKEIPLERAQMRVR--ITLGGKDAKKVIEKAVKLAT 192
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
SVE E W G +ICLIDPG +R +D+++R++T+G G ELLNLKE+ EGE+
Sbjct: 193 SVEEENWESGTANIICLIDPGSFRNLDDMIRSDTKGHGQFELLNLKEMVEGEQ 245
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/87 (80%), Positives = 78/87 (89%)
Query: 5 FTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG 64
FTPTNQIR+TNVAIVR+KK GKR+EIACY+NKV+SWRN +EKDIDEVLQTHTVFTNVSKG
Sbjct: 1 FTPTNQIRLTNVAIVRLKKGGKRYEIACYRNKVLSWRNKLEKDIDEVLQTHTVFTNVSKG 60
Query: 65 QAANKEDLKKAFNTEDQTEICKLILMK 91
Q A KEDL K F T++QTEICK IL K
Sbjct: 61 QVAKKEDLVKIFGTDNQTEICKEILEK 87
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER SQI++ FKDIAT V++KC+N ETKRP+ VS+IE +K HFSVN
Sbjct: 83 EILEKGELQVSDKERHSQIDSLFKDIATTVADKCVNPETKRPYPVSIIEKAMKDTHFSVN 142
Query: 437 VNKNSKQQALE 447
VN+++KQQAL+
Sbjct: 143 VNRSAKQQALD 153
>gi|307205666|gb|EFN83928.1| Ribosome maturation protein SBDS [Harpegnathos saltator]
Length = 253
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 163/298 (54%), Positives = 204/298 (68%), Gaps = 49/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VRMKK+GKRFEIACYKNKV+SWRN +E+
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKSGKRFEIACYKNKVVSWRNKLER-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DIDEVLQTHTVF NVSKGQ A KEDL K
Sbjct: 47 --------------------------------DIDEVLQTHTVFANVSKGQVAKKEDLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +DQTE+CK IL KGELQ+SD+ER +++ FKDIAT V+ CIN ETKRP+ VSMI
Sbjct: 75 AFGNDDQTEVCKQILEKGELQVSDRERHMALDSMFKDIATAVASMCINPETKRPYPVSMI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E+ +K QIHFSV N+NSKQQA EV LK+ M IERAQMR+++ + ++ KKL++K+
Sbjct: 135 ESSMKDQIHFSVKPNRNSKQQAREVFTLLKEVMPIERAQMRLKIVIQR--REAKKLRDKV 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+K ++ E EEW G L + CLIDPG+++++DELVR+ET+G LELL LKE+ EG+E
Sbjct: 193 IKLISNTEAEEWDNGVLTITCLIDPGQFKQLDELVRSETKGSALLELLCLKEIEEGDE 250
Score = 161 bits (408), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/91 (81%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VRMKK+GKRFEIACYKNKV+SWRN +E+DIDEVLQTHTVF N
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRMKKSGKRFEIACYKNKVVSWRNKLERDIDEVLQTHTVFAN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF +DQTE+CK IL K
Sbjct: 61 VSKGQVAKKEDLIKAFGNDDQTEVCKQILEK 91
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK-QIHFSV 435
++L E+ + ER +++ FKDIAT V+ CIN ETKRP+ VSMIE+ +K QIHFSV
Sbjct: 87 QILEKGELQVSDRERHMALDSMFKDIATAVASMCINPETKRPYPVSMIESSMKDQIHFSV 146
Query: 436 NVNKNSKQQALE 447
N+NSKQQA E
Sbjct: 147 KPNRNSKQQARE 158
>gi|348544039|ref|XP_003459489.1| PREDICTED: ribosome maturation protein SBDS-like isoform 1
[Oreochromis niloticus]
Length = 249
Score = 318 bits (814), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A K+DL KAF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKDDLTKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TVS+IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQSQLETMFRDIATIVAEKCVNPETKRPYTVSLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M I+RA MR+R+ + A K+ K+LKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIRQLKESMEIQRAHMRLRLVLPA--KEAKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ETRG+G+LE+L+LK+V EG+E
Sbjct: 195 QVVESEDFD-EELEMVCLVDPGCFREIDELIRCETRGRGSLEVLSLKDVEEGDE 247
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLTKAFGTDDLTEICKQILAK 90
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TVS+IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQSQLETMFRDIATIVAEKCVNPETKRPYTVSLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|157113875|ref|XP_001652129.1| hypothetical protein AaeL_AAEL006625 [Aedes aegypti]
gi|108877567|gb|EAT41792.1| AAEL006625-PA [Aedes aegypti]
Length = 252
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 159/297 (53%), Positives = 203/297 (68%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M KIFTPTNQIR+TNVA+VR+KK GKRFEIACYKNKV+SWR E
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRIKKGGKRFEIACYKNKVVSWRTGAE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQT +VFTNVSKG+ A KEDL K
Sbjct: 46 -------------------------------KDLDEVLQTGSVFTNVSKGEVAKKEDLMK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D TEICK IL KGELQIS+KER Q+E+ FK+IAT V+++C+N ETKRP+ VS+I
Sbjct: 75 AFGKDDVTEICKEILAKGELQISEKERHDQLESMFKEIATNVADRCVNPETKRPYPVSII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IH+S+ N+N+KQQALEVI L++ + +ERA+MR++V + KD K+LKEK+
Sbjct: 135 EKSMKDIHYSIKPNRNAKQQALEVIKLLQETIPLERAKMRLKVTLPG--KDAKRLKEKVT 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K + VE E+W G L+L CLI+PG +RE+DE+VRT+T+G G LE+LNLKE+ EGEE
Sbjct: 193 KLCSPVEAEDWEGDKLVLTCLINPGHFREMDEIVRTDTKGAGVLEVLNLKEIKEGEE 249
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 77/91 (84%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M KIFTPTNQIR+TNVA+VR+KK GKRFEIACYKNKV+SWR EKD+DEVLQT +VFTN
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRIKKGGKRFEIACYKNKVVSWRTGAEKDLDEVLQTGSVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A KEDL KAF +D TEICK IL K
Sbjct: 61 VSKGEVAKKEDLMKAFGKDDVTEICKEILAK 91
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q+E+ FK+IAT V+++C+N ETKRP+ VS+IE +K IH+S+
Sbjct: 87 EILAKGELQISEKERHDQLESMFKEIATNVADRCVNPETKRPYPVSIIEKSMKDIHYSIK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQALE
Sbjct: 147 PNRNAKQQALE 157
>gi|170031811|ref|XP_001843777.1| shwachman-Bodian-Diamond syndrome protein [Culex quinquefasciatus]
gi|167871176|gb|EDS34559.1| shwachman-Bodian-Diamond syndrome protein [Culex quinquefasciatus]
Length = 252
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 204/297 (68%), Gaps = 48/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M KIFTPTNQIR+TNVA+VR+KKAGKRFEIACYKNKV+SWR
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRIKKAGKRFEIACYKNKVVSWR------------------- 41
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
S EKD+DEVLQT +VFTNVSKG+ A KEDL K
Sbjct: 42 ---------------------------SGAEKDLDEVLQTGSVFTNVSKGEVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF ED TEICK IL KGELQIS+KER Q+E+ FK+IAT V+++C+N ETKRP+ VS+I
Sbjct: 75 AFGKEDVTEICKEILAKGELQISEKERQDQLESMFKEIATNVADRCVNPETKRPYPVSII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K +H+S+ ++N+KQQALEVI L+ + +ERA+MR++V ++ K+ K+LK+K+
Sbjct: 135 EKSMKDVHYSIKQHRNAKQQALEVIKILQDSIPLERAKMRLKVTLAG--KEAKRLKDKIA 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K + VE EEW G L+L LI+PG YRE+DE+VRTET+G G LE+LNLKE+ EGEE
Sbjct: 193 KLCSPVEAEEWDGDKLVLTGLINPGHYREMDEIVRTETKGHGVLEVLNLKEIKEGEE 249
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 79/91 (86%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M KIFTPTNQIR+TNVA+VR+KKAGKRFEIACYKNKV+SWR+ EKD+DEVLQT +VFTN
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRIKKAGKRFEIACYKNKVVSWRSGAEKDLDEVLQTGSVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A KEDL KAF ED TEICK IL K
Sbjct: 61 VSKGEVAKKEDLVKAFGKEDVTEICKEILAK 91
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q+E+ FK+IAT V+++C+N ETKRP+ VS+IE +K +H+S+
Sbjct: 87 EILAKGELQISEKERQDQLESMFKEIATNVADRCVNPETKRPYPVSIIEKSMKDVHYSIK 146
Query: 437 VNKNSKQQALE 447
++N+KQQALE
Sbjct: 147 QHRNAKQQALE 157
>gi|410910366|ref|XP_003968661.1| PREDICTED: ribosome maturation protein SBDS-like [Takifugu
rubripes]
Length = 249
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A K+DL KAF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKDDLTKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER +Q+E F+DIATIV+EKC+N +TKRP+TVS+IE
Sbjct: 77 TDDLTEICKQILTKGELQVSDKERQAQLETMFRDIATIVAEKCVNPDTKRPYTVSLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV +K++KQQALEVI LK+ M I+RA MR+R+ + A K+ K+LKEKL
Sbjct: 137 MKDIHYSVKASKSTKQQALEVIRQLKETMEIQRAHMRLRLVLPA--KEAKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+++LK+V EG+E
Sbjct: 195 QVVESEDFD-EDLEMVCLVDPGCFREIDELIRCETKGRGSLEVISLKDVEEGDE 247
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLTKAFGTDDLTEICKQILTK 90
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER +Q+E F+DIATIV+EKC+N +TKRP+TVS+IE +K IH+SV
Sbjct: 86 QILTKGELQVSDKERQAQLETMFRDIATIVAEKCVNPDTKRPYTVSLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
+K++KQQALE
Sbjct: 146 ASKSTKQQALE 156
>gi|340373331|ref|XP_003385195.1| PREDICTED: ribosome maturation protein SBDS-like [Amphimedon
queenslandica]
Length = 250
Score = 311 bits (798), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/294 (52%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWRN +E
Sbjct: 3 IFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTVF NVSKGQ A ++DL AF
Sbjct: 45 ----------------------------KDIDEVLQTHTVFNNVSKGQVAKRDDLASAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK IL KGELQIS++ER SQ+E+ F+DI+TIV++KC+N +TKRP+TV MIE
Sbjct: 77 TEDQTEICKTILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K +H++V +++KQQ+L+VI LK M +ERA+MR+++ + VK+ +K++EK+V
Sbjct: 137 MKDVHYAVKPTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLP--VKEARKVREKIVGLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
SVE E+W L ++CLIDPG++REIDE+VR +T+G G +E+LNLK+V EG+E
Sbjct: 195 ASVEQEDWR-PQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGDE 247
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWRN +EKDIDEVLQTHTVF NVSK
Sbjct: 3 IFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A ++DL AF TEDQTEICK IL K
Sbjct: 63 GQVAKRDDLASAFGTEDQTEICKTILSK 90
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 54/70 (77%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ E ER SQ+E+ F+DI+TIV++KC+N +TKRP+TV MIE +K +H++V
Sbjct: 87 ILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKDVHYAVKP 146
Query: 438 NKNSKQQALE 447
+++KQQ+L+
Sbjct: 147 TRSAKQQSLD 156
>gi|119112438|ref|XP_317609.3| AGAP007882-PA [Anopheles gambiae str. PEST]
gi|116123353|gb|EAA12796.3| AGAP007882-PA [Anopheles gambiae str. PEST]
Length = 253
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 205/298 (68%), Gaps = 49/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M KIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVLSWR------------------- 41
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
S EKD+DEVLQT VF NVSKG+ A KE+L+K
Sbjct: 42 ---------------------------SGAEKDLDEVLQTIAVFNNVSKGEVAKKEELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D TEICK IL KGELQ+S+KER Q+++ FK+IAT V++KC+N ETKRP+ VS+I
Sbjct: 75 AFGKDDVTEICKEILAKGELQVSEKERQDQLDSMFKEIATTVADKCVNPETKRPYPVSII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IH+S+ ++N+KQQAL+VI L+ + +ERA+MR+++ + A K+ K+LKE++
Sbjct: 135 EKSMKDIHYSIKPHRNAKQQALDVIRLLRDTIPLERAKMRLKLALPA--KEAKRLKERIA 192
Query: 333 KCATSV-ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K +++V E EEW G L+L CLIDPG +RE+DE++RTET+G G LE+LNLKE+ EGEE
Sbjct: 193 KLSSTVTEGEEWEGERLMLTCLIDPGHFREMDEIIRTETKGAGALEVLNLKEIKEGEE 250
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 77/91 (84%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M KIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT VF N
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVLSWRSGAEKDLDEVLQTIAVFNN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A KE+L+KAF +D TEICK IL K
Sbjct: 61 VSKGEVAKKEELQKAFGKDDVTEICKEILAK 91
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q+++ FK+IAT V++KC+N ETKRP+ VS+IE +K IH+S+
Sbjct: 87 EILAKGELQVSEKERQDQLDSMFKEIATTVADKCVNPETKRPYPVSIIEKSMKDIHYSIK 146
Query: 437 VNKNSKQQALE 447
++N+KQQAL+
Sbjct: 147 PHRNAKQQALD 157
>gi|431898134|gb|ELK06829.1| Ribosome maturation protein SBDS [Pteropus alecto]
Length = 250
Score = 310 bits (795), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + K+LKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKRLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|291233370|ref|XP_002736622.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 252
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/296 (55%), Positives = 206/296 (69%), Gaps = 51/296 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVAIVRMKKAGKRFEIACYKNKVISW++ IE
Sbjct: 3 IFTPTNQIRLTNVAIVRMKKAGKRFEIACYKNKVISWKDKIE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTVFTNVSKGQ + KEDLK+AF
Sbjct: 45 ----------------------------KDIDEVLQTHTVFTNVSKGQVSKKEDLKRAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK+IL KGE Q+S+KER Q++ F+DIATIV+EKC+N ETKRP+TV +IE G
Sbjct: 77 TEDQTEICKMILAKGEFQVSEKERHQQLDAMFRDIATIVAEKCVNPETKRPYTVGLIERG 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQ--CMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K +HFSV +++KQQALEVI LK+ M I+RAQMR+++ + KK+K+KL
Sbjct: 137 MKDLHFSVKPTRSTKQQALEVIRQLKEQDIMKIDRAQMRIKIRLPKKEA--KKVKDKLTP 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
++E+EEW G L ++ LIDPG +RE+D+LV++ TRGQG+LELL+LK+V EG+E
Sbjct: 195 LIKTIEHEEWD-GDLEMVLLIDPGCFREMDDLVKSTTRGQGSLELLSLKDVEEGDE 249
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/88 (87%), Positives = 83/88 (94%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVAIVRMKKAGKRFEIACYKNKVISW++ IEKDIDEVLQTHTVFTNVSK
Sbjct: 3 IFTPTNQIRLTNVAIVRMKKAGKRFEIACYKNKVISWKDKIEKDIDEVLQTHTVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ + KEDLK+AF TEDQTEICK+IL K
Sbjct: 63 GQVSKKEDLKRAFGTEDQTEICKMILAK 90
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 49/60 (81%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER Q++ F+DIATIV+EKC+N ETKRP+TV +IE G+K +HFSV +++KQQALE
Sbjct: 97 EKERHQQLDAMFRDIATIVAEKCVNPETKRPYTVGLIERGMKDLHFSVKPTRSTKQQALE 156
>gi|156392803|ref|XP_001636237.1| predicted protein [Nematostella vectensis]
gi|156223338|gb|EDO44174.1| predicted protein [Nematostella vectensis]
Length = 251
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/297 (53%), Positives = 204/297 (68%), Gaps = 49/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ IFTPTNQ+++TNVA+VR+KK+GKRFEIACYKNKV+SWR N+E
Sbjct: 1 MANIFTPTNQVKLTNVAVVRLKKSGKRFEIACYKNKVMSWRTNVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVFTNVSKGQ A EDL +
Sbjct: 46 -------------------------------KDIDEVLQTHTVFTNVSKGQVAKNEDLVR 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T++QT+IC IL KGELQ+S+KER+ Q+E+ F+DIATIV++KC+N ETKRP+ V +I
Sbjct: 75 AFGTDNQTDICLKILAKGELQVSEKERNQQLESSFRDIATIVADKCVNPETKRPYPVGVI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IH+SV ++SKQQALEVI LK+ M I+RAQMR+R+ + KD KK++EKL
Sbjct: 135 ERAMKDIHYSVIPTRSSKQQALEVIRQLKENMQIDRAQMRLRLVLPG--KDAKKVQEKLR 192
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
T VE+EEW L ++CL+DPG YR IDE +R ETRG+G +E+L+LK+V EG+E
Sbjct: 193 PLMTKVESEEWD-MDLEIVCLVDPGCYRSIDETLRAETRGRGNMEVLSLKDVQEGDE 248
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 81/91 (89%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ IFTPTNQ+++TNVA+VR+KK+GKRFEIACYKNKV+SWR N+EKDIDEVLQTHTVFTN
Sbjct: 1 MANIFTPTNQVKLTNVAVVRLKKSGKRFEIACYKNKVMSWRTNVEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A EDL +AF T++QT+IC IL K
Sbjct: 61 VSKGQVAKNEDLVRAFGTDNQTDICLKILAK 91
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ + ++LVR T+ + L++L E+ E+ER+ Q+E+ F+DIATIV++KC+N
Sbjct: 64 GQVAKNEDLVRAFGTDNQTDICLKILAKGELQVSEKERNQQLESSFRDIATIVADKCVNP 123
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ETKRP+ V +IE +K IH+SV ++SKQQALE
Sbjct: 124 ETKRPYPVGVIERAMKDIHYSVIPTRSSKQQALE 157
>gi|47221046|emb|CAG12740.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/294 (53%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD++EVLQTH+VF NVSKGQ A K+DL K+F
Sbjct: 45 ----------------------------KDLEEVLQTHSVFVNVSKGQVAKKDDLTKSFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER +Q+E F+DIATIV+EKC+N ETKRP+TVS+IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQTQLETMFRDIATIVAEKCVNPETKRPYTVSLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV +K++KQQALEVI LK+ M I+RA MR+R+ + A K+ K++KEKL
Sbjct: 137 MKDIHYSVKASKSTKQQALEVIRQLKETMEIQRAHMRLRLVLPA--KEAKRMKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+++LK+V EG+E
Sbjct: 195 QVVESEDFD-EDLEMVCLVDPGCFREIDELIRCETKGRGSLEVISLKDVEEGDE 247
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD++EVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLEEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL K+F T+D TEICK IL K
Sbjct: 63 GQVAKKDDLTKSFGTDDLTEICKQILAK 90
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER +Q+E F+DIATIV+EKC+N ETKRP+TVS+IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQTQLETMFRDIATIVAEKCVNPETKRPYTVSLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
+K++KQQALE
Sbjct: 146 ASKSTKQQALE 156
>gi|312377386|gb|EFR24224.1| hypothetical protein AND_11318 [Anopheles darlingi]
Length = 364
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 205/298 (68%), Gaps = 49/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M KIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR E
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRMKKNGKRFEIACYKNKVLSWRAGAE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQT VF NVSKG+ A KE+L K
Sbjct: 46 -------------------------------KDLDEVLQTVAVFHNVSKGEVAKKEELAK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D TEICK IL KGELQ+S+KER Q+E+ FK+IAT V++KC+N ETKRP+ VS+I
Sbjct: 75 AFGKDDVTEICKEILAKGELQVSEKERQDQLESMFKEIATNVADKCVNPETKRPYPVSII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K IH+S+ ++N+KQQAL+VI LK + +ERA+MR+++ + A K+ +KLKE+++
Sbjct: 135 EKSMKDIHYSIKPHRNAKQQALDVIRLLKDTIPVERAKMRLKLTLPA--KEARKLKERIL 192
Query: 333 KCATSV-ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K +++V ENEEW G L+L CLIDPG +RE+DE++R +++G GTLE+LNLKE+ EGEE
Sbjct: 193 KLSSTVTENEEWQGELLVLTCLIDPGHFREMDEIIRVDSKGSGTLEVLNLKEIKEGEE 250
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 75/91 (82%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M KIFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR EKD+DEVLQT VF N
Sbjct: 1 MPKIFTPTNQIRLTNVAVVRMKKNGKRFEIACYKNKVLSWRAGAEKDLDEVLQTVAVFHN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A KE+L KAF +D TEICK IL K
Sbjct: 61 VSKGEVAKKEELAKAFGKDDVTEICKEILAK 91
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q+E+ FK+IAT V++KC+N ETKRP+ VS+IE +K IH+S+
Sbjct: 87 EILAKGELQVSEKERQDQLESMFKEIATNVADKCVNPETKRPYPVSIIEKSMKDIHYSIK 146
Query: 437 VNKNSKQQALE 447
++N+KQQAL+
Sbjct: 147 PHRNAKQQALD 157
>gi|260820846|ref|XP_002605745.1| hypothetical protein BRAFLDRAFT_218465 [Branchiostoma floridae]
gi|229291080|gb|EEN61755.1| hypothetical protein BRAFLDRAFT_218465 [Branchiostoma floridae]
Length = 252
Score = 308 bits (788), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 156/296 (52%), Positives = 201/296 (67%), Gaps = 50/296 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VR K+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRQKRAGKRFEIACYKNKVMGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTVFTNVSKG+ A K+D+ KAF
Sbjct: 45 ----------------------------KDIDEVLQTHTVFTNVSKGEVAKKQDMVKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK IL KGELQ+S+KER SQ+E+ +KDIAT+V++ C+N ETKRP+TV +IE
Sbjct: 77 TEDQTEICKQILKKGELQVSEKERHSQLESMYKDIATLVADMCVNPETKRPYTVGLIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K +HFSV +N+KQQALEVI LK + ++IERAQMR++ V ++ KK++ KL K
Sbjct: 137 MKDVHFSVKPTRNTKQQALEVIKKLKETETINIERAQMRIKFTVPQ--REAKKVRTKLTK 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
A VE E W ++ L+DPG +RE+DEL+R ET+G+G++ELL+LKEV EG+E
Sbjct: 195 IAKKVEGENWEDDEFNMVALMDPGCFREVDELIRVETKGKGSMELLSLKEVEEGDE 250
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 79/88 (89%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VR K+AGKRFEIACYKNKV+ WR+ +EKDIDEVLQTHTVFTNVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRQKRAGKRFEIACYKNKVMGWRSGVEKDIDEVLQTHTVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A K+D+ KAF TEDQTEICK IL K
Sbjct: 63 GEVAKKQDMVKAFGTEDQTEICKQILKK 90
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ E+ER SQ+E+ +KDIAT+V++ C+N ETKRP+TV +IE +K +HFSV
Sbjct: 86 QILKKGELQVSEKERHSQLESMYKDIATLVADMCVNPETKRPYTVGLIEKAMKDVHFSVK 145
Query: 437 VNKNSKQQALE 447
+N+KQQALE
Sbjct: 146 PTRNTKQQALE 156
>gi|196010321|ref|XP_002115025.1| hypothetical protein TRIADDRAFT_28466 [Trichoplax adhaerens]
gi|190582408|gb|EDV22481.1| hypothetical protein TRIADDRAFT_28466 [Trichoplax adhaerens]
Length = 251
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/293 (52%), Positives = 199/293 (67%), Gaps = 48/293 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP NQ+++TNVA+VR+K+ GKRFEIACYKNKVISWRN E
Sbjct: 3 IFTPINQLKLTNVAVVRLKRNGKRFEIACYKNKVISWRNKAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDI+EVLQTH++F NVSKGQ A KEDL KAF
Sbjct: 45 ----------------------------KDIEEVLQTHSIFINVSKGQVAKKEDLFKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D TEICK ILMKG+LQ+S+KER+SQIE F++IATIV++KC+N ETKRP+TVS+IE G
Sbjct: 77 TYDDTEICKEILMKGDLQVSEKERASQIETMFREIATIVADKCVNPETKRPYTVSLIEKG 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NKN+KQQAL+VI LK+ M IERAQMR+R+ ++ ++ +K KE L
Sbjct: 137 MKDIHYSVKTNKNTKQQALDVIRQLKENMQIERAQMRLRLTLTG--REGRKAKEILYPKM 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
VE +EW G L ++CLIDPG R DE VR+ T+G+G++E+LNLK++ EG+
Sbjct: 195 AHVEKDEWDNGSLEIVCLIDPGHLRSFDETVRSLTKGKGSVEVLNLKDIEEGD 247
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP NQ+++TNVA+VR+K+ GKRFEIACYKNKVISWRN EKDI+EVLQTH++F NVSK
Sbjct: 3 IFTPINQLKLTNVAVVRLKRNGKRFEIACYKNKVISWRNKAEKDIEEVLQTHSIFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL KAF T D TEICK ILMK
Sbjct: 63 GQVAKKEDLFKAFGTYDDTEICKEILMK 90
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 58/71 (81%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L ++ E+ER+SQIE F++IATIV++KC+N ETKRP+TVS+IE G+K IH+SV
Sbjct: 86 EILMKGDLQVSEKERASQIETMFREIATIVADKCVNPETKRPYTVSLIEKGMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NKN+KQQAL+
Sbjct: 146 TNKNTKQQALD 156
>gi|432889559|ref|XP_004075288.1| PREDICTED: ribosome maturation protein SBDS-like isoform 1 [Oryzias
latipes]
Length = 249
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 163/294 (55%), Positives = 199/294 (67%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRTGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 45 ----------------------------KDLDEVLQTPSVFINVSKGQTAKKDDLLKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK IL KGELQ+SDKER +Q+E F+DIAT V++KC+N ETKRP+ VSMIE
Sbjct: 77 TEDQTEICKQILAKGELQVSDKERQTQLETMFRDIATTVADKCVNPETKRPYPVSMIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M I+RA MR+R+++ A K+ K+LKEKL K
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIRQLKETMEIQRAHMRLRLQLPA--KEAKRLKEKL-KPL 193
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
V E L +ICL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EGEE
Sbjct: 194 LQVVESEEFDEELEMICLVDPGCFREIDELIRCETKGRGSLEVLSLKDVEEGEE 247
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRTGAEKDLDEVLQTPSVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF TEDQTEICK IL K
Sbjct: 63 GQTAKKDDLLKAFGTEDQTEICKQILAK 90
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ + D+L++ TE + + ++L E+ ++ER +Q+E F+DIAT V++KC+N
Sbjct: 63 GQTAKKDDLLKAFGTEDQTEICKQILAKGELQVSDKERQTQLETMFRDIATTVADKCVNP 122
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ETKRP+ VSMIE +K IH+SV NK++KQQALE
Sbjct: 123 ETKRPYPVSMIERAMKDIHYSVKPNKSTKQQALE 156
>gi|320164507|gb|EFW41406.1| ribosome maturation protein SBDS [Capsaspora owczarzaki ATCC 30864]
Length = 250
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 205/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVAIVR++K G R+E+ACYKNKV+SWR+ +E
Sbjct: 3 IFTPTNQIRLTNVAIVRLRKGGTRYELACYKNKVMSWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHT+F NVSKGQAA +E+++ AF
Sbjct: 45 ----------------------------KDIDEVLQTHTIFLNVSKGQAAKREEIEAAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T DQ ++ IL KGELQ+S+KER Q++ +++IATIV+E C+N+ET+RPFTV++IE
Sbjct: 77 TADQEKVIHEILTKGELQVSEKERQVQLDAMYREIATIVTEMCVNSETQRPFTVTLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K HFSVNV K++KQQALEVI L++ +SI+RAQMRVR+ + VKD KK+K+++V
Sbjct: 137 MKDAHFSVNVTKSTKQQALEVIKQLQETISIKRAQMRVRIVLP--VKDAKKIKDRVVSLV 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
++VE+EEW+ G L L CLIDPG +R +D+++R+ET+GQG LE+L+LK + EG+E
Sbjct: 195 STVESEEWT-GDLELTCLIDPGAFRPLDDVIRSETKGQGVLEVLSLKHIEEGDE 247
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 61/102 (59%), Positives = 81/102 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVAIVR++K G R+E+ACYKNKV+SWR+ +EKDIDEVLQTHT+F NVSK
Sbjct: 3 IFTPTNQIRLTNVAIVRLRKGGTRYELACYKNKVMSWRSGVEKDIDEVLQTHTIFLNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRM 105
GQAA +E+++ AF T DQ ++ IL K ++ Q+++
Sbjct: 63 GQAAKREEIEAAFGTADQEKVIHEILTKGELQVSEKERQVQL 104
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q++ +++IATIV+E C+N+ET+RPFTV++IE +K HFSVN
Sbjct: 86 EILTKGELQVSEKERQVQLDAMYREIATIVTEMCVNSETQRPFTVTLIERAMKDAHFSVN 145
Query: 437 VNKNSKQQALE 447
V K++KQQALE
Sbjct: 146 VTKSTKQQALE 156
>gi|346469215|gb|AEO34452.1| hypothetical protein [Amblyomma maculatum]
Length = 251
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 200/296 (67%), Gaps = 52/296 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WRNN+E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRNNVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQ HTV+TNVSKGQAA KEDL K F
Sbjct: 45 ----------------------------KDIDEVLQMHTVYTNVSKGQAAKKEDLVKCFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQT+ICK IL KGELQ+S+KER SQ+E+ F+DIAT+V++ C+N ETKRP+ VS++E
Sbjct: 77 TDDQTKICKEILTKGELQVSEKERHSQLESSFRDIATLVADMCVNPETKRPYPVSIVEKS 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+++ HFSV NK++KQQALEVI LK+ M +ER+QM++RV + G K ++ +L A
Sbjct: 137 MREAHFSVRPNKSAKQQALEVIRMLKEVMPLERSQMKLRVVLPQG----KSVRPRLEALA 192
Query: 336 TSVENEEWSG--GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+SVE G G L ++ L DPG +R++DELV E+RG+G LE+++LKEV EG+E
Sbjct: 193 SSVEMATVHGDTGALEMVLLTDPGNFRQVDELVSKESRGRGQLEVISLKEVQEGDE 248
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 80/88 (90%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WRNN+EKDIDEVLQ HTV+TNVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRNNVEKDIDEVLQMHTVYTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQAA KEDL K F T+DQT+ICK IL K
Sbjct: 63 GQAAKKEDLVKCFGTDDQTKICKEILTK 90
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER SQ+E+ F+DIAT+V++ C+N ETKRP+ VS++E +++ HFSV
Sbjct: 86 EILTKGELQVSEKERHSQLESSFRDIATLVADMCVNPETKRPYPVSIVEKSMREAHFSVR 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSAKQQALE 156
>gi|241999438|ref|XP_002434362.1| ribosome maturation protein SBDS, putative [Ixodes scapularis]
gi|215497692|gb|EEC07186.1| ribosome maturation protein SBDS, putative [Ixodes scapularis]
Length = 251
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 202/296 (68%), Gaps = 52/296 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR+++E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRSDVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTV+TNVSKGQAA KEDL K F
Sbjct: 45 ----------------------------KDIDEVLQTHTVYTNVSKGQAAKKEDLIKCFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+EDQT+ICK IL KGELQ+S+KER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE
Sbjct: 77 SEDQTKICKEILSKGELQVSEKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEKS 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
++++HFSV NK++KQQ+LEVI LK+ M IER+QM++RV V G KK + L A
Sbjct: 137 MREMHFSVKPNKSAKQQSLEVIRQLKEVMPIERSQMKLRVVVPNG----KKARPLLKALA 192
Query: 336 TSVENEEWSG--GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+S+E + G G L ++ L DPG +R +DELV E+RG+G LE+++LKEV EG+E
Sbjct: 193 SSIEQDVIQGATGELEMVFLTDPGNFRAVDELVSKESRGKGQLEVISLKEVLEGDE 248
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 81/88 (92%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR+++EKDIDEVLQTHTV+TNVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRSDVEKDIDEVLQTHTVYTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQAA KEDL K F +EDQT+ICK IL K
Sbjct: 63 GQAAKKEDLIKCFGSEDQTKICKEILSK 90
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 58/71 (81%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE ++++HFSV
Sbjct: 86 EILSKGELQVSEKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEKSMREMHFSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQ+LE
Sbjct: 146 PNKSAKQQSLE 156
>gi|427787597|gb|JAA59250.1| Putative shwachman-bodian-diamond syndrome [Rhipicephalus
pulchellus]
Length = 251
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 198/296 (66%), Gaps = 52/296 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WRN +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRNGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQ HTV+TNVSKGQAA KEDL K F
Sbjct: 45 ----------------------------KDIDEVLQMHTVYTNVSKGQAAKKEDLIKCFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQT+ICK IL KGELQ+S+KER SQ+E+ F+DIAT+V++ CIN ETKRP+ VS++E
Sbjct: 77 TDDQTKICKEILTKGELQVSEKERHSQLESSFRDIATLVADMCINPETKRPYPVSIVERS 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K+ HFSV NK++KQQALE I LK+ M +ER+QM++RV + G K ++ +L A
Sbjct: 137 MKEAHFSVRPNKSAKQQALEAIRQLKEVMPLERSQMKLRVVLPHG----KNVRPRLEALA 192
Query: 336 TSVENEEWSG--GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+SVE G G L ++ L DPG +R++DELV E+RG+G LE+++LKEV EG+E
Sbjct: 193 SSVEMATIHGDTGTLEMVLLTDPGNFRQVDELVSKESRGRGQLEVISLKEVQEGDE 248
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/88 (80%), Positives = 79/88 (89%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WRN +EKDIDEVLQ HTV+TNVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRNGVEKDIDEVLQMHTVYTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQAA KEDL K F T+DQT+ICK IL K
Sbjct: 63 GQAAKKEDLIKCFGTDDQTKICKEILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER SQ+E+ F+DIAT+V++ CIN ETKRP+ VS++E +K+ HFSV
Sbjct: 86 EILTKGELQVSEKERHSQLESSFRDIATLVADMCINPETKRPYPVSIVERSMKEAHFSVR 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSAKQQALE 156
>gi|291413813|ref|XP_002723158.1| PREDICTED: Shwachman-Bodian-Diamond syndrome protein [Oryctolagus
cuniculus]
Length = 250
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A K+DL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKDDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGELQ+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGELQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R S V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLR--FSLPVNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDY-GQQLEMVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKDDLISAFGTDDQTEICKQILTK 90
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGELQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|148886656|ref|NP_001092159.1| ribosome maturation protein SBDS [Xenopus laevis]
gi|158514279|sp|A5D8M6.1|SBDS_XENLA RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|146327123|gb|AAI41737.1| LOC100049749 protein [Xenopus laevis]
Length = 250
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 196/294 (66%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL KAF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFMNVSKGQGAKKEDLLKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK IL KGELQ+S+KERS+Q+E F+DIATIV++KC+N ETKRP+TV++IE
Sbjct: 77 TEDQTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV K++KQQAL+VI LK+ M IERA MR+R V A K K K +
Sbjct: 137 MKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFIVPAKDGKKLKEKLKPLIKH 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
EN + L ++CLIDPG +REIDEL+R ET+G+GTLE+L+LK+V EG+E
Sbjct: 197 IESENFDQE---LEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGDE 247
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/88 (81%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL KAF TEDQTEICK IL K
Sbjct: 63 GQGAKKEDLLKAFGTEDQTEICKQILSK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ E+ E+ERS+Q+E F+DIATIV++KC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
K++KQQAL+
Sbjct: 146 ATKSTKQQALD 156
>gi|57525276|ref|NP_001006211.1| ribosome maturation protein SBDS [Gallus gallus]
gi|326931157|ref|XP_003211700.1| PREDICTED: LOW QUALITY PROTEIN: ribosome maturation protein
SBDS-like [Meleagris gallopavo]
gi|363741066|ref|XP_003642436.1| PREDICTED: ribosome maturation protein SBDS-like [Gallus gallus]
gi|82081366|sp|Q5ZIY4.1|SBDS_CHICK RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|53134189|emb|CAG32309.1| hypothetical protein RCJMB04_22m12 [Gallus gallus]
Length = 250
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 164/294 (55%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VR ++AGKRFEIACY+NKV+ WR
Sbjct: 3 IFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKDIDEVLQTHTVF NVSKGQ A KEDL +AF
Sbjct: 41 ------------------------SGAEKDIDEVLQTHTVFVNVSKGQVAKKEDLVRAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK+IL KGELQ+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKVILSKGELQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + VK+ KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILP--VKEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+ENE++ L ++CLIDPG +REIDEL+R+ET+G+GTLE+L+LK+V EG+E
Sbjct: 195 KVIENEDFH-DQLEIVCLIDPGCFREIDELIRSETKGKGTLEVLSLKDVEEGDE 247
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VR ++AGKRFEIACY+NKV+ WR+ EKDIDEVLQTHTVF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDIDEVLQTHTVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL +AF T+DQTEICK+IL K
Sbjct: 63 GQVAKKEDLVRAFGTDDQTEICKVILSK 90
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 87 ILSKGELQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKP 146
Query: 438 NKNSKQQALE 447
NK++KQQALE
Sbjct: 147 NKSTKQQALE 156
>gi|402863294|ref|XP_003895961.1| PREDICTED: ribosome maturation protein SBDS [Papio anubis]
Length = 250
Score = 298 bits (764), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|332639397|pdb|2L9N|A Chain A, Structure Of The Human Shwachman-Bodian-Diamond Syndrome
(Sbds) Protein
Length = 252
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 5 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 47 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 79 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 139 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 197 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 249
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 5 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 65 GQVAKKEDLISAFGTDDQTEICKQILTK 92
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 88 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 147
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 148 TNKSTKQQALE 158
>gi|284055339|pdb|2KDO|A Chain A, Structure Of The Human Shwachman-Bodian-Diamond Syndrome
Protein, Sbds
Length = 252
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 5 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 47 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 79 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 139 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 197 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 249
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 5 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 65 GQVAKKEDLISAFGTDDQTEICKQILTK 92
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 88 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 147
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 148 TNKSTKQQALE 158
>gi|229368074|gb|ACQ59017.1| Ribosome maturation protein SBDS [Anoplopoma fimbria]
Length = 249
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 198/294 (67%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVNWRAGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTHTVF NVSKGQ A KEDL K+F
Sbjct: 45 ----------------------------KDLDEVLQTHTVFVNVSKGQVAKKEDLTKSFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER +Q+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERHTQLETTFRDIATIVAEKCVNPETKRPYTVNLIEGA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK+SKQQALEVI LK+ M I+RA MR+R+ + A K K K +
Sbjct: 137 MKDIHYSVKPNKSSKQQALEVIRQLKESMEIQRAHMRLRLVLPAKEAKKLKEKLKPL--L 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ETRG+G+LE+L+LK+V EGEE
Sbjct: 195 QVVESEDFD-EQLEMVCLVDPGCFREIDELIRCETRGRGSLEVLSLKDVEEGEE 247
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR EKD+DEVLQTHTVF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVNWRAGAEKDLDEVLQTHTVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL K+F T+D TEICK IL K
Sbjct: 63 GQVAKKEDLTKSFGTDDLTEICKQILAK 90
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER +Q+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERHTQLETTFRDIATIVAEKCVNPETKRPYTVNLIEGAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK+SKQQALE
Sbjct: 146 PNKSSKQQALE 156
>gi|28416940|ref|NP_057122.2| ribosome maturation protein SBDS [Homo sapiens]
gi|197102836|ref|NP_001125618.1| ribosome maturation protein SBDS [Pongo abelii]
gi|114613778|ref|XP_519568.2| PREDICTED: ribosome maturation protein SBDS isoform 4 [Pan
troglodytes]
gi|332253960|ref|XP_003276100.1| PREDICTED: ribosome maturation protein SBDS [Nomascus leucogenys]
gi|28380824|sp|Q9Y3A5.4|SBDS_HUMAN RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein
gi|75041953|sp|Q5RAZ2.1|SBDS_PONAB RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|7023264|dbj|BAA91905.1| unnamed protein product [Homo sapiens]
gi|27802129|gb|AAN77490.1| Shwachman-Bodian-Diamond syndrome protein [Homo sapiens]
gi|41350825|gb|AAH65700.1| Shwachman-Bodian-Diamond syndrome [Homo sapiens]
gi|55728657|emb|CAH91068.1| hypothetical protein [Pongo abelii]
gi|119628311|gb|EAX07906.1| Shwachman-Bodian-Diamond syndrome [Homo sapiens]
gi|158260241|dbj|BAF82298.1| unnamed protein product [Homo sapiens]
gi|312150856|gb|ADQ31940.1| Shwachman-Bodian-Diamond syndrome [synthetic construct]
gi|355560587|gb|EHH17273.1| Shwachman-Bodian-Diamond syndrome protein [Macaca mulatta]
gi|355747610|gb|EHH52107.1| Shwachman-Bodian-Diamond syndrome protein [Macaca fascicularis]
gi|380783735|gb|AFE63743.1| ribosome maturation protein SBDS [Macaca mulatta]
gi|383414503|gb|AFH30465.1| ribosome maturation protein SBDS [Macaca mulatta]
gi|384942824|gb|AFI35017.1| ribosome maturation protein SBDS [Macaca mulatta]
gi|410295802|gb|JAA26501.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410354721|gb|JAA43964.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410354723|gb|JAA43965.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410354725|gb|JAA43966.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
Length = 250
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|301783055|ref|XP_002926942.1| PREDICTED: ribosome maturation protein SBDS-like [Ailuropoda
melanoleuca]
gi|281350775|gb|EFB26359.1| hypothetical protein PANDA_016643 [Ailuropoda melanoleuca]
Length = 250
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMQIERAHMRLRFLLP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|209736804|gb|ACI69271.1| Ribosome maturation protein SBDS [Salmo salar]
gi|221220590|gb|ACM08956.1| Ribosome maturation protein SBDS [Salmo salar]
Length = 250
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAKKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ + I+RA MR+R+ + A KD K+LKEKL
Sbjct: 137 MKDIHYSVKANKSTKQQALEVIRQLKESIEIQRAHMRLRLVLPA--KDGKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 247
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLSKAFGTDDLTEICKQILAK 90
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 ANKSTKQQALE 156
>gi|225703542|gb|ACO07617.1| Shwachman-Bodian-Diamond syndrome protein homolog [Oncorhynchus
mykiss]
Length = 250
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAEKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ + I+RA MR+R+ + A KD K+LKEKL
Sbjct: 137 MKDIHYSVKANKSTKQQALEVIRQLKESIEIQRAHMRLRLVLPA--KDGKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 247
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAEKDDLSKAFGTDDLTEICKQILAK 90
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 ANKSTKQQALE 156
>gi|426254665|ref|XP_004020997.1| PREDICTED: ribosome maturation protein SBDS [Ovis aries]
Length = 250
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|410984674|ref|XP_003998651.1| PREDICTED: ribosome maturation protein SBDS [Felis catus]
Length = 250
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|410220170|gb|JAA07304.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410220172|gb|JAA07305.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410255664|gb|JAA15799.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
gi|410255666|gb|JAA15800.1| Shwachman-Bodian-Diamond syndrome [Pan troglodytes]
Length = 250
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + + + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--INEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|346986341|ref|NP_001231322.1| ribosome maturation protein SBDS [Sus scrofa]
Length = 250
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKENMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|229367294|gb|ACQ58627.1| Ribosome maturation protein SBDS [Anoplopoma fimbria]
Length = 249
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/295 (53%), Positives = 199/295 (67%), Gaps = 49/295 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV++WR E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVNWRAGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTHTVF NVSKGQ A KEDL K+F
Sbjct: 45 ----------------------------KDLDEVLQTHTVFVNVSKGQVAKKEDLTKSFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER +Q+E F+DIATIV+EKC+N ET+RP+TV++IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERHTQLETTFRDIATIVAEKCVNPETERPYTVNLIEGA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK+SKQQALEVI LK+ M I+RA MR+R+ + A K K K +
Sbjct: 137 MKDIHYSVKPNKSSKQQALEVIRQLKESMEIQRAHMRLRLVLPAKEAKKLKEKLKPL--L 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEE 390
VE+E++ L ++CL+DPG +REIDEL+R ETRG+G+LE+L+LK+V EGEEE
Sbjct: 195 QVVESEDFD-EQLEMVCLVDPGCFREIDELIRCETRGRGSLEVLSLKDVEEGEEE 248
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV++WR EKD+DEVLQTHTVF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVNWRAGAEKDLDEVLQTHTVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL K+F T+D TEICK IL K
Sbjct: 63 GQVAKKEDLTKSFGTDDLTEICKQILAK 90
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER +Q+E F+DIATIV+EKC+N ET+RP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERHTQLETTFRDIATIVAEKCVNPETERPYTVNLIEGAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK+SKQQALE
Sbjct: 146 PNKSSKQQALE 156
>gi|149725681|ref|XP_001500047.1| PREDICTED: ribosome maturation protein SBDS-like [Equus caballus]
Length = 250
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|126314099|ref|XP_001362957.1| PREDICTED: ribosome maturation protein SBDS-like [Monodelphis
domestica]
Length = 250
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V++ KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKESMKIERAHMRLRFILP--VREGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVIESEDF-GEQLEIVCLIDPGCFREIDELIQRETKGKGSLEVLSLKDVEEGDE 247
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|225705116|gb|ACO08404.1| Shwachman-Bodian-Diamond syndrome protein homolog [Oncorhynchus
mykiss]
Length = 250
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAKKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKEILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNLETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK + I+RA MR+R+ + A K+ ++LKEKL
Sbjct: 137 MKDIHYSVEANKSTKQQALEVIRQLKDSIEIQRAHMRLRLVLPA--KEGRRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 247
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLSKAFGTDDLTEICKEILAK 90
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 EILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNLETKRPYTVNLIERAMKDIHYSVE 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 ANKSTKQQALE 156
>gi|417397847|gb|JAA45957.1| Putative ribosome maturation protein sbds [Desmodus rotundus]
Length = 250
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 204/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV +NK++KQQALEVI LK+ M IERA MR+R + + + KKLKEKL
Sbjct: 137 MKDIHYSVKINKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--LNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
+NK++KQQALE
Sbjct: 146 INKSTKQQALE 156
>gi|52345818|ref|NP_001004953.1| ribosome maturation protein SBDS [Xenopus (Silurana) tropicalis]
gi|82183452|sp|Q6DIT8.1|SBDS_XENTR RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|49522422|gb|AAH75447.1| Shwachman-Bodian-Diamond syndrome [Xenopus (Silurana) tropicalis]
gi|89273904|emb|CAJ83828.1| Shwachman-Bodian-Diamond syndrome [Xenopus (Silurana) tropicalis]
Length = 250
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 196/294 (66%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL K+F
Sbjct: 45 ----------------------------KDLDEVLQTHSVFMNVSKGQVAKKEDLLKSFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED TEICK IL KGELQ+S+KERS+Q+E F+DIATIV++KC+N ETKRP+TV++IE
Sbjct: 77 TEDPTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV K++KQQAL+VI LK+ M IERA MR+R + A K K K +
Sbjct: 137 MKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAKDGKKLKEKLKPLIKH 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
T EN + L ++CLIDPG +REIDEL+R ET+G+GTLE+L+LK+V EG+E
Sbjct: 197 TESENFDQE---LEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGDE 247
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL K+F TED TEICK IL K
Sbjct: 63 GQVAKKEDLLKSFGTEDPTEICKQILSK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 57/71 (80%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ E+ E+ERS+Q+E F+DIATIV++KC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
K++KQQAL+
Sbjct: 146 ATKSTKQQALD 156
>gi|209734136|gb|ACI67937.1| Ribosome maturation protein SBDS [Salmo salar]
Length = 250
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAKKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK+++QQALEVI LK + I+RA MR+R+ + VKD K+LKEKL
Sbjct: 137 MKDIHYSVKANKSTRQQALEVIRQLKDSIEIQRAHMRLRLVLP--VKDGKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 247
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLSKAFGTDDLTEICKQILAK 90
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK+++QQALE
Sbjct: 146 ANKSTRQQALE 156
>gi|344289905|ref|XP_003416681.1| PREDICTED: ribosome maturation protein SBDS-like [Loxodonta
africana]
Length = 250
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLP--VSEGKKLKEKLKPFI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYD-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|444720602|gb|ELW61384.1| Ribosome maturation protein SBDS [Tupaia chinensis]
Length = 250
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLVSAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLVSAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|91090934|ref|XP_974343.1| PREDICTED: similar to Shwachman-Bodian-Diamond syndrome protein
homolog (Protein 22A3) [Tribolium castaneum]
gi|270013208|gb|EFA09656.1| hypothetical protein TcasGA2_TC011782 [Tribolium castaneum]
Length = 252
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/299 (52%), Positives = 199/299 (66%), Gaps = 49/299 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TN+A+VRMKK GKRFEIACY+NKV+SWRN +E
Sbjct: 1 MSKIFTPTNQIRLTNIAVVRMKKGGKRFEIACYRNKVVSWRNQVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ+HTVF NVSKGQ A KEDL K
Sbjct: 46 -------------------------------KDIDEVLQSHTVFANVSKGQVAKKEDLVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNTEDQTEICK IL+KGELQ+SDKER SQI+ FKDIAT V+EKCIN E KRP+ V++I
Sbjct: 75 AFNTEDQTEICKEILLKGELQVSDKERQSQIDQLFKDIATTVAEKCINPELKRPYPVTII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E +K H+SV N+++KQQAL+VI LK+ + +ERA+MR++V +S G K KK+K+K+
Sbjct: 135 EKAMKDAHYSVKPNQSAKQQALQVIKLLKEQIPLERAKMRLKV-ISKG-KVAKKMKDKIG 192
Query: 333 KC-ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEE 390
K + VE E+ L LI L+DPG ++EID +V+ E + LE+L+ KE+ G E+
Sbjct: 193 KFESVEVEKEDRDDDQLTLIFLVDPGHFKEIDTMVQAEIKNGSYLEVLSYKEMASGLEQ 251
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TN+A+VRMKK GKRFEIACY+NKV+SWRN +EKDIDEVLQ+HTVF N
Sbjct: 1 MSKIFTPTNQIRLTNIAVVRMKKGGKRFEIACYRNKVVSWRNQVEKDIDEVLQSHTVFAN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAFNTEDQTEICK IL+K
Sbjct: 61 VSKGQVAKKEDLVKAFNTEDQTEICKEILLK 91
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 3/94 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ + ++LV+ TE + + E+L E+ ++ER SQI+ FKDIAT V+EKCIN
Sbjct: 64 GQVAKKEDLVKAFNTEDQTEICKEILLKGELQVSDKERQSQIDQLFKDIATTVAEKCINP 123
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E KRP+ V++IE +K H+SV N+++KQQAL+
Sbjct: 124 ELKRPYPVTIIEKAMKDAHYSVKPNQSAKQQALQ 157
>gi|355717888|gb|AES06086.1| Shwachman-Bodian-Diamond syndrome [Mustela putorius furo]
Length = 246
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACY+NKV+SWR+ +E
Sbjct: 2 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYRNKVVSWRSGVE------------------ 43
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 44 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLLSAFG 75
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQT +CK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 76 TDDQTAVCKQILSKGEVQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 135
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 136 MKDIHYSVKANKSTKQQALEVIKQLKEKMQIERAHMRLRFLLP--VNEGKKLKEKLKPLI 193
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ G L ++CL+DPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 194 KVVESEDY-GQQLEIVCLVDPGCFREIDELIKKETKGRGSLEVLSLKDVEEGDE 246
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACY+NKV+SWR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 2 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYRNKVVSWRSGVEKDLDEVLQTHSVFVNVSK 61
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQT +CK IL K
Sbjct: 62 GQVAKKEDLLSAFGTDDQTAVCKQILSK 89
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 85 QILSKGEVQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 144
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 145 ANKSTKQQALE 155
>gi|296192188|ref|XP_002743950.1| PREDICTED: ribosome maturation protein SBDS [Callithrix jacchus]
Length = 250
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLITAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +RE+DEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLITAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|198431511|ref|XP_002124818.1| PREDICTED: similar to Shwachman-Bodian-Diamond syndrome homolog
[Ciona intestinalis]
Length = 250
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/295 (52%), Positives = 202/295 (68%), Gaps = 50/295 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQ+R+TNVAIVR+KK GKRFEIACYKNKV+SWRNN E
Sbjct: 3 IFTPTNQVRLTNVAIVRIKKTGKRFEIACYKNKVMSWRNNTE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTVF NVSKGQ A +DL KAF
Sbjct: 45 ----------------------------KDIDEVLQTHTVFVNVSKGQTAKNQDLIKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T++QTE+CK IL KGELQ+S+KERS +E+ F+DIATIV++ C+N +TKRP+TV++IE
Sbjct: 77 TDNQTEVCKQILAKGELQVSEKERSVHLESMFRDIATIVTDMCVNPDTKRPYTVTVIERA 136
Query: 276 LKQ-IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
+K+ IH+SVN +N+KQQAL+VI LK+ ++I RA+MR+R + KD KK+KEKL
Sbjct: 137 MKEDIHYSVNPTRNTKQQALQVIKLLKEKININRAEMRLRFFLPG--KDGKKIKEKLQPM 194
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+VE+EE+S L ++CL+DPG YR+I ++V ETRG+G +E++NLK++ E EE
Sbjct: 195 LKTVESEEFS-SALEMVCLVDPGSYRQIFDIVSKETRGKGKVEVMNLKDIEESEE 248
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQ+R+TNVAIVR+KK GKRFEIACYKNKV+SWRNN EKDIDEVLQTHTVF NVSK
Sbjct: 3 IFTPTNQVRLTNVAIVRIKKTGKRFEIACYKNKVMSWRNNTEKDIDEVLQTHTVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A +DL KAF T++QTE+CK IL K
Sbjct: 63 GQTAKNQDLIKAFGTDNQTEVCKQILAK 90
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 56/72 (77%), Gaps = 1/72 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ-IHFSV 435
++L E+ E+ERS +E+ F+DIATIV++ C+N +TKRP+TV++IE +K+ IH+SV
Sbjct: 86 QILAKGELQVSEKERSVHLESMFRDIATIVTDMCVNPDTKRPYTVTVIERAMKEDIHYSV 145
Query: 436 NVNKNSKQQALE 447
N +N+KQQAL+
Sbjct: 146 NPTRNTKQQALQ 157
>gi|289740389|gb|ADD18942.1| putative exosome subunit [Glossina morsitans morsitans]
Length = 253
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/297 (51%), Positives = 190/297 (63%), Gaps = 46/297 (15%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVA+VR+KKAGKRFE+ACYKNKV+SWRNN+E
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRLKKAGKRFELACYKNKVLSWRNNVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQTHTVFTNVSKGQAA KE+L K
Sbjct: 46 -------------------------------KDIDEVLQTHTVFTNVSKGQAAKKEELIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF D+TEIC+ IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ ++I
Sbjct: 75 AFGKTDETEICREILSKGELQVSEKERHSAMDTQMNSIINSVAALCVNPETRRPYPSTII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFS+ N+N+KQQ L+ I LK M IER++M++R+ +A + KL E +V
Sbjct: 135 EKSLKDAHFSIKPNRNTKQQTLDAIKLLKTHMPIERSRMKIRITFAAKKDNGPKLVESIV 194
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
K A SVE EEW L + IDPG YR ID+LVR ET+G+G +ELL LK+V E EE
Sbjct: 195 KMAASVELEEWIESTLQITIFIDPGNYRAIDDLVRNETKGKGLVELLELKDVVEAEE 251
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVA+VR+KKAGKRFE+ACYKNKV+SWRNN+EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAVVRLKKAGKRFELACYKNKVLSWRNNVEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA KE+L KAF D+TEIC+ IL K
Sbjct: 61 VSKGQAAKKEELIKAFGKTDETEICREILSK 91
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ ++IE LK HFS+
Sbjct: 87 EILSKGELQVSEKERHSAMDTQMNSIINSVAALCVNPETRRPYPSTIIEKSLKDAHFSIK 146
Query: 437 VNKNSKQQALE 447
N+N+KQQ L+
Sbjct: 147 PNRNTKQQTLD 157
>gi|77735833|ref|NP_001029611.1| ribosome maturation protein SBDS [Bos taurus]
gi|110287954|sp|Q3SWZ6.1|SBDS_BOVIN RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|74356381|gb|AAI04586.1| Shwachman-Bodian-Diamond syndrome [Bos taurus]
gi|296473273|tpg|DAA15388.1| TPA: ribosome maturation protein SBDS [Bos taurus]
Length = 250
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +RE+DEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|348560025|ref|XP_003465815.1| PREDICTED: ribosome maturation protein SBDS-like [Cavia porcellus]
Length = 250
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEMVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|73957623|ref|XP_848632.1| PREDICTED: ribosome maturation protein SBDS [Canis lupus
familiaris]
Length = 249
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 162/294 (55%), Positives = 203/294 (69%), Gaps = 50/294 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ W+
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWK---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
AA EKD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 41 --AA-----------------------EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 75
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 76 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 135
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 136 MKDIHYSVKTNKSTKQQALEVIKQLKEKMQIERAHMRLRFLLP--VNEGKKLKEKLKPLI 193
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 194 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 246
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%), Gaps = 1/88 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ W+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWKAA-EKDLDEVLQTHSVFVNVSK 61
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 62 GQVAKKEDLISAFGTDDQTEICKQILTK 89
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 85 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 144
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 145 TNKSTKQQALE 155
>gi|351706263|gb|EHB09182.1| Ribosome maturation protein SBDS [Heterocephalus glaber]
Length = 250
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL F
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISVFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPMI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+ENE++S L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KIIENEDYS-QQLEMVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL F T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISVFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|395842931|ref|XP_003794260.1| PREDICTED: ribosome maturation protein SBDS [Otolemur garnettii]
Length = 250
Score = 295 bits (754), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKENMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|440910863|gb|ELR60613.1| Ribosome maturation protein SBDS, partial [Bos grunniens mutus]
Length = 252
Score = 295 bits (754), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 203/294 (69%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 5 IFTPTNQIRLTNVAMVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 47 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+T+ +IE
Sbjct: 79 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTIILIERA 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 139 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +RE+DEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 197 KVIESEDY-GQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLKDVEEGDE 249
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 5 IFTPTNQIRLTNVAMVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 65 GQVAKKEDLISAFGTDDQTEICKQILTK 92
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+T+ +IE +K IH+SV
Sbjct: 88 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTIILIERAMKDIHYSVK 147
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 148 PNKSTKQQALE 158
>gi|225703652|gb|ACO07672.1| Shwachman-Bodian-Diamond syndrome protein homolog [Oncorhynchus
mykiss]
Length = 250
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAKKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TDDLTEICKEILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK + I+RA MR+R+ + A K+ K+LKEKL
Sbjct: 137 MKDIHYSVKANKSTKQQALEVIRQLKDSIEIQRAHMRLRLVLPA--KEGKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 247
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLSKAFGTDDLTEICKEILAK 90
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 EILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 ANKSTKQQALE 156
>gi|56605652|ref|NP_001008290.1| ribosome maturation protein SBDS [Rattus norvegicus]
gi|81883383|sp|Q5RK30.1|SBDS_RAT RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|55778437|gb|AAH86335.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Rattus
norvegicus]
gi|149063139|gb|EDM13462.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Rattus
norvegicus]
Length = 250
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLP--VNEGKKLKEKLKPLM 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDE 247
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|23956138|ref|NP_075737.1| ribosome maturation protein SBDS [Mus musculus]
gi|20532375|sp|P70122.4|SBDS_MOUSE RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Protein 22A3; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|12836762|dbj|BAB23803.1| unnamed protein product [Mus musculus]
gi|12852636|dbj|BAB29487.1| unnamed protein product [Mus musculus]
gi|12859325|dbj|BAB31612.1| unnamed protein product [Mus musculus]
gi|13277966|gb|AAH03849.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Mus musculus]
gi|74223057|dbj|BAE40670.1| unnamed protein product [Mus musculus]
gi|148687524|gb|EDL19471.1| Shwachman-Bodian-Diamond syndrome homolog (human) [Mus musculus]
Length = 250
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLM 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++S L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 195 KVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSLKDVEEGDE 247
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|221116214|ref|XP_002167770.1| PREDICTED: ribosome maturation protein SBDS-like [Hydra
magnipapillata]
Length = 252
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/298 (52%), Positives = 200/298 (67%), Gaps = 50/298 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ IFTPTNQIR+TNVAIVR KK GKRFEIACYKNKV+SWR
Sbjct: 1 MASIFTPTNQIRLTNVAIVRQKKFGKRFEIACYKNKVLSWR------------------- 41
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
Q A EKDI+EVLQT VFTNVSKGQ A +EDL +
Sbjct: 42 ----QGA-----------------------EKDINEVLQTQQVFTNVSKGQVAKREDLIQ 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T+D+ E C IL KGELQ+S+KERS Q E+ ++DIAT VS KC+N ETKRP+ V +I
Sbjct: 75 AFGTDDEKECCLKILAKGELQVSEKERSQQFESMYRDIATTVSNKCVNPETKRPYPVGVI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKD-VKKLKEKL 331
E+ +K+IHF+V NK++K QALEVI LK ++IERA+MR+R+ + KD KK +EK+
Sbjct: 135 ESAMKEIHFAVKPNKSTKMQALEVIKLLKASIAIERAEMRIRIILP---KDCAKKTREKV 191
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
V +++E EEW G L + CLIDPG YR I+E++ +E++G+G +ELL+LKE+TEGEE
Sbjct: 192 VTLVSNIEKEEWLLGQLDMECLIDPGVYRVINEMISSESKGKGNVELLSLKEITEGEE 249
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 74/91 (81%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ IFTPTNQIR+TNVAIVR KK GKRFEIACYKNKV+SWR EKDI+EVLQT VFTN
Sbjct: 1 MASIFTPTNQIRLTNVAIVRQKKFGKRFEIACYKNKVLSWRQGAEKDINEVLQTQQVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A +EDL +AF T+D+ E C IL K
Sbjct: 61 VSKGQVAKREDLIQAFGTDDEKECCLKILAK 91
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 54/72 (75%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
L++L E+ E+ERS Q E+ ++DIAT VS KC+N ETKRP+ V +IE+ +K+IHF+V
Sbjct: 86 LKILAKGELQVSEKERSQQFESMYRDIATTVSNKCVNPETKRPYPVGVIESAMKEIHFAV 145
Query: 436 NVNKNSKQQALE 447
NK++K QALE
Sbjct: 146 KPNKSTKMQALE 157
>gi|397486932|ref|XP_003814572.1| PREDICTED: ribosome maturation protein SBDS [Pan paniscus]
Length = 250
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE
Sbjct: 77 TDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLID G +REIDEL++ ET+G+G+LE+LNLK++ EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDLGCFREIDELIKKETKGKGSLEVLNLKDLEEGDE 247
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 86 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 TNKSTKQQALE 156
>gi|225708608|gb|ACO10150.1| Shwachman-Bodian-Diamond syndrome protein homolog [Osmerus mordax]
Length = 250
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/294 (54%), Positives = 202/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT++VF NVSKGQ A K+DL AF
Sbjct: 41 ------------------------SGAEKDLDEVLQTNSVFINVSKGQVAKKDDLSNAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED EICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE
Sbjct: 77 TEDLNEICKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+SV NK++KQQALEVI LK+ + I+RA MR+R+ + VK+ K+LKEKL
Sbjct: 137 MKDIHYSVKANKSTKQQALEVIRQLKESIQIQRAHMRLRLLLP--VKEGKRLKEKLKPLL 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDE++R ET+G+G+LE+L+LK+V EGEE
Sbjct: 195 KVVESEDFD-EQLEMVCLVDPGCFREIDEMIRCETKGRGSLEVLSLKDVEEGEE 247
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 75/88 (85%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT++VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTNSVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL AF TED EICK IL K
Sbjct: 63 GQVAKKDDLSNAFGTEDLNEICKQILAK 90
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IH+SV
Sbjct: 86 QILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHYSVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 ANKSTKQQALE 156
>gi|340385188|ref|XP_003391092.1| PREDICTED: ribosome maturation protein SBDS-like [Amphimedon
queenslandica]
Length = 249
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 146/285 (51%), Positives = 195/285 (68%), Gaps = 49/285 (17%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
+TN+AIVRMKK GKRFEIACYKNKV+SWRN +E
Sbjct: 11 LTNIAIVRMKKGGKRFEIACYKNKVVSWRNKVE--------------------------- 43
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
KDIDEVLQTHTVF NVSKGQ A ++DL AF TEDQTEICK
Sbjct: 44 -------------------KDIDEVLQTHTVFNNVSKGQVAKRDDLVSAFGTEDQTEICK 84
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL KGELQIS++ER SQ+E+ F+DI+TIV++KC+N +TKRP+TV MIE +K +H++V
Sbjct: 85 TILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKDVHYAVK 144
Query: 285 VNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS 344
+++KQQ+L+VI LK M +ERA+MR+++ + VK+ +K++EK+V SVE E+W
Sbjct: 145 PTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLP--VKEARKVREKIVGLLASVEQEDWR 202
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
L ++CLIDPG++REIDE+VR +T+G G +E+LNLK+V EG+E
Sbjct: 203 -PQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGDE 246
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 69/79 (87%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
+TN+AIVRMKK GKRFEIACYKNKV+SWRN +EKDIDEVLQTHTVF NVSKGQ A ++DL
Sbjct: 11 LTNIAIVRMKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSKGQVAKRDDL 70
Query: 73 KKAFNTEDQTEICKLILMK 91
AF TEDQTEICK IL K
Sbjct: 71 VSAFGTEDQTEICKTILSK 89
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 54/70 (77%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ E ER SQ+E+ F+DI+TIV++KC+N +TKRP+TV MIE +K +H++V
Sbjct: 86 ILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKDVHYAVKP 145
Query: 438 NKNSKQQALE 447
+++KQQ+L+
Sbjct: 146 TRSAKQQSLD 155
>gi|442755449|gb|JAA69884.1| Putative exosome subunit [Ixodes ricinus]
Length = 252
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 151/297 (50%), Positives = 198/297 (66%), Gaps = 53/297 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR+++E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRSDVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTV+TNVSKGQAA KEDL K F
Sbjct: 45 ----------------------------KDIDEVLQTHTVYTNVSKGQAAKKEDLIKCFG 76
Query: 216 TEDQTEICKLI-LMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+EDQT+ICK I LQ+S+KER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE
Sbjct: 77 SEDQTKICKEIPXXXXRLQVSEKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEK 136
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
++++HFSV NK++KQQ+LEVI LK+ M IER+QM++RV V G KK + L
Sbjct: 137 SMREMHFSVKPNKSAKQQSLEVIRQLKEVMPIERSQMKLRVVVPNG----KKARPLLKAL 192
Query: 335 ATSVENEEWSG--GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
A+SVE + G G L ++ L DPG +R +DELV E+RG+G LE+++LKEV EG+E
Sbjct: 193 ASSVEQDVIQGATGELEMVFLTDPGNFRAVDELVSKESRGKGQLEVISLKEVLEGDE 249
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 69/85 (81%), Positives = 79/85 (92%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV++WR+++EKDIDEVLQTHTV+TNVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVVAWRSDVEKDIDEVLQTHTVYTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLI 88
GQAA KEDL K F +EDQT+ICK I
Sbjct: 63 GQAAKKEDLIKCFGSEDQTKICKEI 87
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 52/60 (86%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE ++++HFSV NK++KQQ+LE
Sbjct: 98 EKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEKSMREMHFSVKPNKSAKQQSLE 157
>gi|4929663|gb|AAD34092.1|AF151855_1 CGI-97 protein [Homo sapiens]
Length = 250
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/294 (53%), Positives = 200/294 (68%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
+A+ EKD+DEVLQTH+VF NVSKGQ A KEDL AF
Sbjct: 41 ----------RAW--------------EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQTEICK IL KGE+Q+SDKER +Q+ F+DIAT V++KC+N ETK P+TV +IE
Sbjct: 77 TDDQTEICKQILAKGEVQVSDKERHTQLGQMFRDIATFVADKCVNPETKGPYTVILIERA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K IH+ V NK++KQQALEVI LK+ M IERA MR+R + V + KKLKEKL
Sbjct: 137 MKDIHYLVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLI 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E+E++ G L ++CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 195 KVIESEDY-GQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 247
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRRAWEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILAK 90
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 51/71 (71%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+ F+DIAT V++KC+N ETK P+TV +IE +K IH+ V
Sbjct: 86 QILAKGEVQVSDKERHTQLGQMFRDIATFVADKCVNPETKGPYTVILIERAMKDIHYLVK 145
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 146 PNKSTKQQALE 156
>gi|194752133|ref|XP_001958377.1| GF23548 [Drosophila ananassae]
gi|190625659|gb|EDV41183.1| GF23548 [Drosophila ananassae]
Length = 252
Score = 284 bits (726), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 181/278 (65%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWRNN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRNN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S +++Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSVLDSQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +NKN+KQ LE I L++ + IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNKNTKQNTLEAIKMLREHLPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANAVEHEEWEESTLHLTLLIDPGQYRVIDELVRNET 231
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWRNN EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S +++Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSVLDSQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|195013249|ref|XP_001983821.1| GH16108 [Drosophila grimshawi]
gi|193897303|gb|EDV96169.1| GH16108 [Drosophila grimshawi]
Length = 252
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/278 (52%), Positives = 183/278 (65%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHT+FTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTIFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D+TEICK IL KGELQ+S+KER S +++Q I V+ C+N ET+RP++ ++I
Sbjct: 75 AFGAKDETEICKEILSKGELQVSEKERQSVLDSQLNSIVNGVAALCVNPETRRPYSATII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +NKN+KQ LE I L++ M IER++M++RV AG + KLK+ ++
Sbjct: 135 EKSLKDAHFSVKMNKNTKQNTLEAIKMLREHMPIERSRMKLRVSF-AGKEGGGKLKDSVI 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANTVEHEEWEEATLHLTLLIDPGQYRVIDELVRNET 231
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 85/91 (93%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAF +D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFGAKDETEICKEILSK 91
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S +++Q I V+ C+N ET+RP++ ++IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSVLDSQLNSIVNGVAALCVNPETRRPYSATIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|125977620|ref|XP_001352843.1| GA21157 [Drosophila pseudoobscura pseudoobscura]
gi|54641594|gb|EAL30344.1| GA21157 [Drosophila pseudoobscura pseudoobscura]
Length = 252
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 181/278 (65%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP++ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSVLDTQLNSIVNSVAALCVNPETRRPYSASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +NKN+KQ LE I L++ + IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNKNTKQNTLEAIKMLREHLPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANAVEHEEWEESTLHLTLLIDPGQYRVIDELVRNET 231
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP++ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSVLDTQLNSIVNSVAALCVNPETRRPYSASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|201065895|gb|ACH92357.1| FI06479p [Drosophila melanogaster]
Length = 260
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/282 (53%), Positives = 181/282 (64%), Gaps = 47/282 (16%)
Query: 89 LMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHT 148
++ MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 5 ILTTMSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN------------- 51
Query: 149 VFTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKE 208
EKDIDEVLQTHTVFTNVSKGQAA K+
Sbjct: 52 ---------------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKD 78
Query: 209 DLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFT 268
+L+KAFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+
Sbjct: 79 ELQKAFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYP 138
Query: 269 VSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLK 328
S+IE LK HFSV +N+N+KQ LE I LK M IER++M++RV AG + KLK
Sbjct: 139 ASIIEKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF-AGKEGGGKLK 197
Query: 329 EKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
E +VK A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 198 ESVVKLANAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNET 239
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 9 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 68
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 69 VSKGQAAKKDELQKAFNKTDETEICKEILSK 99
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 95 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 154
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 155 MNRNTKQNTLE 165
>gi|41055291|ref|NP_957415.1| ribosome maturation protein SBDS [Danio rerio]
gi|29476858|gb|AAH50179.1| Shwachman-Bodian-Diamond syndrome [Danio rerio]
gi|157423210|gb|AAI53637.1| Shwachman-Bodian-Diamond syndrome [Danio rerio]
Length = 231
Score = 281 bits (719), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 151/277 (54%), Positives = 186/277 (67%), Gaps = 49/277 (17%)
Query: 113 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNM 172
MKK GKRFEIACYKNKV+SWR
Sbjct: 1 MKKGGKRFEIACYKNKVMSWR--------------------------------------- 21
Query: 173 LNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGEL 232
S EKD+DEVLQT+TVF NVSKGQ A KEDL AF T+D TEICK IL KGEL
Sbjct: 22 -------SGAEKDLDEVLQTNTVFVNVSKGQVAKKEDLSNAFGTDDLTEICKQILSKGEL 74
Query: 233 QISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 292
Q+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IHFSV NK++KQQ
Sbjct: 75 QVSDKERQSQLEQMFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHFSVKANKSTKQQ 134
Query: 293 ALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLIC 352
ALEVI LK+ + I+RA MR+R + A KD K+LKEKL +VENE++ L ++C
Sbjct: 135 ALEVIKQLKESIQIQRAHMRLRFVLPA--KDGKRLKEKLKPLIKAVENEDFD-DQLEMVC 191
Query: 353 LIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
LIDPG +R+IDEL+R ET+G+GTLE+L+LK+V EG+E
Sbjct: 192 LIDPGCFRDIDELIRCETKGKGTLEVLSLKDVEEGDE 228
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 59/71 (83%)
Query: 21 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 80
MKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT+TVF NVSKGQ A KEDL AF T+D
Sbjct: 1 MKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTNTVFVNVSKGQVAKKEDLSNAFGTDD 60
Query: 81 QTEICKLILMK 91
TEICK IL K
Sbjct: 61 LTEICKQILSK 71
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE +K IHFSV
Sbjct: 67 QILSKGELQVSDKERQSQLEQMFRDIATIVAEKCVNPETKRPYTVNLIERAMKDIHFSVK 126
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 127 ANKSTKQQALE 137
>gi|24659572|ref|NP_648057.2| CG8549, isoform A [Drosophila melanogaster]
gi|442630602|ref|NP_001261482.1| CG8549, isoform B [Drosophila melanogaster]
gi|7295325|gb|AAF50645.1| CG8549, isoform A [Drosophila melanogaster]
gi|440215379|gb|AGB94177.1| CG8549, isoform B [Drosophila melanogaster]
Length = 252
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 179/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +N+N+KQ LE I LK M IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNET 231
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 147 MNRNTKQNTLE 157
>gi|194865656|ref|XP_001971538.1| GG14387 [Drosophila erecta]
gi|190653321|gb|EDV50564.1| GG14387 [Drosophila erecta]
Length = 252
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 179/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +N+N+KQ LE I LK M IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANTVEHEEWDEATLHLTLLIDPGQYRVIDELVRNET 231
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 147 MNRNTKQNTLE 157
>gi|195492354|ref|XP_002093954.1| GE21574 [Drosophila yakuba]
gi|194180055|gb|EDW93666.1| GE21574 [Drosophila yakuba]
Length = 252
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/278 (53%), Positives = 179/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +N+N+KQ LE I LK M IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANTVEHEEWDEATLHLTLLIDPGQYRVIDELVRNET 231
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 147 MNRNTKQNTLE 157
>gi|195376113|ref|XP_002046841.1| GJ12267 [Drosophila virilis]
gi|194153999|gb|EDW69183.1| GJ12267 [Drosophila virilis]
Length = 252
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 179/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHT+FTNVSKGQ A K++L K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTIFTNVSKGQTAKKDELVK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D+TEICK IL KGELQ+S+KER S +++Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFGAKDETEICKEILSKGELQVSEKERHSVLDSQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +NKN+KQ LE I L+ M IER++M++RV AG + KLK+ +V
Sbjct: 135 EKSLKDAHFSVKMNKNTKQNTLEAIKMLRDHMPIERSRMKLRVSF-AGKEGGGKLKDAVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANAVEHEEWEESTLHLTLLIDPGQYRVIDELVRNET 231
Score = 160 bits (406), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 83/91 (91%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A K++L KAF +D+TEICK IL K
Sbjct: 61 VSKGQTAKKDELVKAFGAKDETEICKEILSK 91
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S +++Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERHSVLDSQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|20151319|gb|AAM11019.1| GH01786p [Drosophila melanogaster]
Length = 252
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/278 (53%), Positives = 179/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQT+TVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTYTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HFSV +N+N+KQ LE I LK M IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANAVEHEEWDEATLHLTLLIDPGQYRVIDELVRNET 231
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/91 (82%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQT+TVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTYTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 147 MNRNTKQNTLE 157
>gi|427778873|gb|JAA54888.1| Putative ribosome maturation protein sbds [Rhipicephalus
pulchellus]
Length = 244
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/296 (49%), Positives = 191/296 (64%), Gaps = 59/296 (19%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+ RFEIACYKNKV++WRN +E
Sbjct: 3 IFTPTNQIRLTNVAV-------XRFEIACYKNKVVAWRNGVE------------------ 37
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQ HTV+TNVSKGQAA KEDL K F
Sbjct: 38 ----------------------------KDIDEVLQMHTVYTNVSKGQAAKKEDLIKCFG 69
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+DQT+ICK IL KGELQ+S+KER SQ+E+ F+DIAT+V++ CIN ETKRP+ VS++E
Sbjct: 70 TDDQTKICKEILTKGELQVSEKERHSQLESSFRDIATLVADMCINPETKRPYPVSIVERS 129
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K+ HFSV NK++KQQALE I LK+ M +ER+QM++RV + G K ++ +L A
Sbjct: 130 MKEAHFSVRPNKSAKQQALEAIRQLKEVMPLERSQMKLRVVLPHG----KNVRPRLEALA 185
Query: 336 TSVENEEWSG--GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+SVE G G L ++ L DPG +R++DELV E+RG+G LE+++LKEV EG+E
Sbjct: 186 SSVEMATIHGDTGTLEMVLLTDPGNFRQVDELVSKESRGRGQLEVISLKEVQEGDE 241
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 7/88 (7%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+ RFEIACYKNKV++WRN +EKDIDEVLQ HTV+TNVSK
Sbjct: 3 IFTPTNQIRLTNVAV-------XRFEIACYKNKVVAWRNGVEKDIDEVLQMHTVYTNVSK 55
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQAA KEDL K F T+DQT+ICK IL K
Sbjct: 56 GQAAKKEDLIKCFGTDDQTKICKEILTK 83
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER SQ+E+ F+DIAT+V++ CIN ETKRP+ VS++E +K+ HFSV
Sbjct: 79 EILTKGELQVSEKERHSQLESSFRDIATLVADMCINPETKRPYPVSIVERSMKEAHFSVR 138
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 139 PNKSAKQQALE 149
>gi|195126004|ref|XP_002007464.1| GI12377 [Drosophila mojavensis]
gi|193919073|gb|EDW17940.1| GI12377 [Drosophila mojavensis]
Length = 252
Score = 278 bits (710), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/278 (53%), Positives = 178/278 (64%), Gaps = 47/278 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHT+FTNVSKGQ A KE+L K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTIFTNVSKGQTAKKEELIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF +D TEICK IL KGELQ+S+KER S +++Q I V+ C+N ET+RP+ ++I
Sbjct: 75 AFGAKDDTEICKEILSKGELQVSEKERQSVLDSQLNSIVNSVAALCVNPETRRPYPATII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E LK HF+V +NKN+KQ LE I L+ M IER++M++RV AG + KLKE +V
Sbjct: 135 EKSLKDAHFNVKMNKNTKQNTLEAIKILRDHMPIERSRMKLRVSF-AGKEGGGKLKESVV 193
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
K A +VE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 KLANTVEHEEWDESTLHLTLLIDPGQYRVIDELVRNET 231
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KE+L KAF +D TEICK IL K
Sbjct: 61 VSKGQTAKKEELIKAFGAKDDTEICKEILSK 91
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S +++Q I V+ C+N ET+RP+ ++IE LK HF+V
Sbjct: 87 EILSKGELQVSEKERQSVLDSQLNSIVNSVAALCVNPETRRPYPATIIEKSLKDAHFNVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|348544041|ref|XP_003459490.1| PREDICTED: ribosome maturation protein SBDS-like isoform 2
[Oreochromis niloticus]
Length = 233
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/294 (52%), Positives = 188/294 (63%), Gaps = 65/294 (22%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQTH+VF NVSKGQ A K+DL KAF
Sbjct: 45 ----------------------------KDLDEVLQTHSVFVNVSKGQVAKKDDLTKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEICK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+T
Sbjct: 77 TDDLTEICKQILAKGELQVSDKERQSQLETMFRDIATIVAEKCVNPETKRPYT------- 129
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
VN QALEVI LK+ M I+RA MR+R+ + A K+ K+LKEKL
Sbjct: 130 ---------VNVCCCFQALEVIRQLKESMEIQRAHMRLRLVLPA--KEAKRLKEKLKPLL 178
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ETRG+G+LE+L+LK+V EG+E
Sbjct: 179 QVVESEDFD-EELEMVCLVDPGCFREIDELIRCETRGRGSLEVLSLKDVEEGDE 231
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 77/88 (87%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TEICK IL K
Sbjct: 63 GQVAKKDDLTKAFGTDDLTEICKQILAK 90
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 423
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++
Sbjct: 86 QILAKGELQVSDKERQSQLETMFRDIATIVAEKCVNPETKRPYTVNV 132
>gi|195439754|ref|XP_002067724.1| GK12553 [Drosophila willistoni]
gi|194163809|gb|EDW78710.1| GK12553 [Drosophila willistoni]
Length = 253
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/279 (54%), Positives = 180/279 (64%), Gaps = 48/279 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP++ ++I
Sbjct: 75 AFGKSDETEICKEILSKGELQVSEKERQSVLDTQINGIINSVAALCVNPETRRPYSATII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQC-MSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E LK HFSV +NKN KQ LE I LK+ + IER++M++RV AG + KLKE +
Sbjct: 135 EKSLKDAHFSVKMNKNIKQNTLEAIKLLKEHQLPIERSRMKLRVSF-AGKEGGGKLKESV 193
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET 370
VK A SVE+EEW L L LIDPG+YR IDELVR ET
Sbjct: 194 VKLANSVEHEEWEESTLHLTLLIDPGQYRVIDELVRNET 232
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/91 (84%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAF D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFGKSDETEICKEILSK 91
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP++ ++IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSVLDTQINGIINSVAALCVNPETRRPYSATIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN KQ LE
Sbjct: 147 MNKNIKQNTLE 157
>gi|443694364|gb|ELT95519.1| hypothetical protein CAPTEDRAFT_17802 [Capitella teleta]
Length = 254
Score = 274 bits (701), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 141/299 (47%), Positives = 192/299 (64%), Gaps = 50/299 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ IFTPTNQ R+TNVAIVR+KK GKRFEIACY NKV WRN IE
Sbjct: 1 MAAIFTPTNQKRLTNVAIVRLKKTGKRFEIACYPNKVTPWRNKIET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DIDEVLQTHTVF NVSKGQ A EDLKK
Sbjct: 47 --------------------------------DIDEVLQTHTVFMNVSKGQVAKSEDLKK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNT+ T++C IL KGELQ+S+KER + +E+ F+DIATIV++KC+N ET RP+TV++I
Sbjct: 75 AFNTDVTTDVCLQILAKGELQVSEKERHANLESMFRDIATIVADKCVNPETNRPYTVTLI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E +K H SV K++KQQALEVI L + + ++RAQMR+R+ A KK++EK
Sbjct: 135 ERAMKDCHVSVKPTKSTKQQALEVIRQLTDSETIDLKRAQMRLRISTPAN--QAKKVREK 192
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+ K A+ VE + + +++ L+DPG +RE+++L+R+ T+G+G +E+++LK+V + EE
Sbjct: 193 IKKIASKVEEDAFEETEFMMVFLVDPGCFREVEDLIRSSTKGKGEIEVISLKDVVDSEE 251
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/91 (74%), Positives = 74/91 (81%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ IFTPTNQ R+TNVAIVR+KK GKRFEIACY NKV WRN IE DIDEVLQTHTVF N
Sbjct: 1 MAAIFTPTNQKRLTNVAIVRLKKTGKRFEIACYPNKVTPWRNKIETDIDEVLQTHTVFMN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A EDLKKAFNT+ T++C IL K
Sbjct: 61 VSKGQVAKSEDLKKAFNTDVTTDVCLQILAK 91
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 53/72 (73%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
L++L E+ E+ER + +E+ F+DIATIV++KC+N ET RP+TV++IE +K H SV
Sbjct: 86 LQILAKGELQVSEKERHANLESMFRDIATIVADKCVNPETNRPYTVTLIERAMKDCHVSV 145
Query: 436 NVNKNSKQQALE 447
K++KQQALE
Sbjct: 146 KPTKSTKQQALE 157
>gi|332376272|gb|AEE63276.1| unknown [Dendroctonus ponderosae]
Length = 254
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/299 (49%), Positives = 191/299 (63%), Gaps = 49/299 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TN+AIVRMKKAGKRFEIACY+NKV+SWRNN+E
Sbjct: 1 MSKIFTPTNQIRLTNIAIVRMKKAGKRFEIACYRNKVVSWRNNVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
K+IDEVLQTH+VFTNVSKGQ A KEDL K
Sbjct: 46 -------------------------------KNIDEVLQTHSVFTNVSKGQVAKKEDLLK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF ++QTEICKLIL KGELQISDKER SQ E FKDIAT ++ C+N E KRP+ V++I
Sbjct: 75 AFGMDNQTEICKLILEKGELQISDKERQSQNEQLFKDIATTLASICLNPELKRPYPVTII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKDVKKLKEK 330
E +K H+SV N+ +K QA+ + LKQ + IERA+MR++V G + K ++
Sbjct: 135 EKAMKDAHYSVKPNQATKVQAMAALKLLKQADIIPIERAKMRIKVHF-GGKEAKKLKQKI 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
L + VE+EE L+ ++DPG+++EI+ L+ +ET+G+G LE+L KE+ G+E
Sbjct: 194 LKLESLQVESEEQDEEHTTLVFVVDPGQFKEINALITSETKGKGLLEVLAYKEIVLGDE 252
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 85/91 (93%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TN+AIVRMKKAGKRFEIACY+NKV+SWRNN+EK+IDEVLQTH+VFTN
Sbjct: 1 MSKIFTPTNQIRLTNIAIVRMKKAGKRFEIACYRNKVVSWRNNVEKNIDEVLQTHSVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL KAF ++QTEICKLIL K
Sbjct: 61 VSKGQVAKKEDLLKAFGMDNQTEICKLILEK 91
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 45/69 (65%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ ++ER SQ E FKDIAT ++ C+N E KRP+ V++IE +K H+SV
Sbjct: 88 ILEKGELQISDKERQSQNEQLFKDIATTLASICLNPELKRPYPVTIIEKAMKDAHYSVKP 147
Query: 438 NKNSKQQAL 446
N+ +K QA+
Sbjct: 148 NQATKVQAM 156
>gi|170591184|ref|XP_001900350.1| hypothetical protein [Brugia malayi]
gi|158591962|gb|EDP30564.1| conserved hypothetical protein [Brugia malayi]
Length = 253
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 142/299 (47%), Positives = 191/299 (63%), Gaps = 48/299 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN E
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KDIDEVLQT TVFTNVSKGQ A +E+L A
Sbjct: 47 ------------------------------KDIDEVLQTETVFTNVSKGQVAKREELNTA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T++Q EICK+IL KG+LQ+S+KER +Q ++ FK++A +++ C+N +TKRP++ S+IE
Sbjct: 77 FGTDNQFEICKIILEKGDLQVSEKERLAQSDSSFKELANLIANMCVNPDTKRPYSSSVIE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L Q H S+ N++ KQQALEVIP L++ M I+RA+MR+RV V A K+ K++ ++L
Sbjct: 137 NALHQTHLSLKPNRSVKQQALEVIPKLRELMKIDRAEMRLRVSVEA--KEAKRMHDRLKG 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERS 392
T +E E+W G L ++ LIDPG YR ++EL++ ET+ G LELL LK + EG+ E S
Sbjct: 195 MFTEIEVEDWEQGNLEMVGLIDPGTYRLVEELLQKETKKAGRLELLTLKVIGEGDVEIS 253
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 75/90 (83%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN EKDIDEVLQT TVFTNV
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTEKDIDEVLQTETVFTNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A +E+L AF T++Q EICK+IL K
Sbjct: 63 SKGQVAKREELNTAFGTDNQFEICKIILEK 92
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER +Q ++ FK++A +++ C+N +TKRP++ S+IE L Q H S+ N++ KQQALE
Sbjct: 99 EKERLAQSDSSFKELANLIANMCVNPDTKRPYSSSVIENALHQTHLSLKPNRSVKQQALE 158
>gi|312074561|ref|XP_003140025.1| shwachman-Bodian-Diamond syndrome [Loa loa]
gi|307764806|gb|EFO24040.1| hypothetical protein LOAG_04440 [Loa loa]
Length = 253
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 141/299 (47%), Positives = 191/299 (63%), Gaps = 48/299 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN E
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KDIDEVLQT TVFTNVSKGQ A +E+L A
Sbjct: 47 ------------------------------KDIDEVLQTQTVFTNVSKGQVAKREELNTA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T++Q EICK+IL KG+LQ+S+KER +Q ++ FK+IA +++ C+N +TKRP++ S+I+
Sbjct: 77 FGTDNQLEICKIILEKGDLQVSEKERLAQSDSSFKEIANLIANMCVNPDTKRPYSSSVID 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L + H S+ N++ KQQALE+IP L++ M I+RA+MR+RV V A K+ K++ ++L
Sbjct: 137 NALHEAHLSLKPNRSIKQQALEIIPKLRESMKIDRAEMRLRVSVEA--KEAKRMHDRLKG 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERS 392
T +E E+W G L ++ LIDPG YR I+EL++ ET+ G LELL LK + EG+ E S
Sbjct: 195 MFTKIEVEDWEQGNLEMVGLIDPGAYRSIEELLQKETKKTGHLELLALKVIDEGDVEIS 253
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 75/90 (83%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN EKDIDEVLQT TVFTNV
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTEKDIDEVLQTQTVFTNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A +E+L AF T++Q EICK+IL K
Sbjct: 63 SKGQVAKREELNTAFGTDNQLEICKIILEK 92
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER +Q ++ FK+IA +++ C+N +TKRP++ S+I+ L + H S+ N++ KQQALE
Sbjct: 99 EKERLAQSDSSFKEIANLIANMCVNPDTKRPYSSSVIDNALHEAHLSLKPNRSIKQQALE 158
>gi|51011506|gb|AAT92162.1| Shwachman-Bodian-Diamond syndrome-like protein [Ixodes pacificus]
Length = 232
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 185/279 (66%), Gaps = 52/279 (18%)
Query: 113 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNM 172
MKK GKRFEIACYKNKV++WR+++E
Sbjct: 1 MKKGGKRFEIACYKNKVVAWRSDVE----------------------------------- 25
Query: 173 LNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGEL 232
KDIDEVLQTHTV+TNVSKGQAA KEDL K F +EDQT+ICK IL KGEL
Sbjct: 26 -----------KDIDEVLQTHTVYTNVSKGQAAKKEDLIKCFGSEDQTKICKEILSKGEL 74
Query: 233 QISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 292
Q+S+KER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE ++++HFSV NK++KQQ
Sbjct: 75 QVSEKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEKSMREMHFSVKPNKSAKQQ 134
Query: 293 ALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG--GGLLL 350
+LEVI LK+ M IER+QM++RV V G KK + L A+SVE + G G L +
Sbjct: 135 SLEVIRQLKEVMPIERSQMKLRVVVPNG----KKARPLLKALASSVEQDVIQGATGELEM 190
Query: 351 ICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+ L DPG +R +DELV E+RG+G LE+++LKEV EG+E
Sbjct: 191 VFLTDPGNFRAVDELVSKESRGKGQLEVISLKEVLEGDE 229
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/71 (78%), Positives = 64/71 (90%)
Query: 21 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 80
MKK GKRFEIACYKNKV++WR+++EKDIDEVLQTHTV+TNVSKGQAA KEDL K F +ED
Sbjct: 1 MKKGGKRFEIACYKNKVVAWRSDVEKDIDEVLQTHTVYTNVSKGQAAKKEDLIKCFGSED 60
Query: 81 QTEICKLILMK 91
QT+ICK IL K
Sbjct: 61 QTKICKEILSK 71
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 58/71 (81%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER SQ+E+ F+DIAT+V++KC+N +TKRP+ +S+IE ++++HFSV
Sbjct: 67 EILSKGELQVSEKERHSQLESSFRDIATLVADKCVNPDTKRPYPMSIIEKSMREMHFSVK 126
Query: 437 VNKNSKQQALE 447
NK++KQQ+LE
Sbjct: 127 PNKSAKQQSLE 137
>gi|308481699|ref|XP_003103054.1| hypothetical protein CRE_25667 [Caenorhabditis remanei]
gi|308260430|gb|EFP04383.1| hypothetical protein CRE_25667 [Caenorhabditis remanei]
Length = 253
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 138/297 (46%), Positives = 189/297 (63%), Gaps = 49/297 (16%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN E
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQTHTVF+NVSKGQ + KE+L
Sbjct: 47 --------------------------------KDIDEVLQTHTVFSNVSKGQLSKKEELI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF EDQ EICK+IL KG+LQ+S+KER + + K+++ +++ +N ETKRP S+
Sbjct: 75 AAFGIEDQFEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSV 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
I+ L+++HFS+ N++SKQQAL+ IP L++ + IERA+M++RV + VK+ K + KL
Sbjct: 135 IDKALQEMHFSLKPNRSSKQQALDAIPKLRETIKIERAKMKIRVAIP--VKEAKAVHLKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+ VE ++W G L ++ LI+PG +R +D+LVR ET+G G LE+L+LK+V EGE
Sbjct: 193 KALFSDVEQDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVVEGE 249
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTEKDIDEVLQTHTVFS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ + KE+L AF EDQ EICK+IL K
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQFEICKIILDK 92
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 47/70 (67%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ ++ E+ER + + K+++ +++ +N ETKRP S+I+ L+++HFS+
Sbjct: 89 ILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKP 148
Query: 438 NKNSKQQALE 447
N++SKQQAL+
Sbjct: 149 NRSSKQQALD 158
>gi|268575972|ref|XP_002642966.1| Hypothetical protein CBG15250 [Caenorhabditis briggsae]
Length = 253
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 138/297 (46%), Positives = 187/297 (62%), Gaps = 49/297 (16%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN E
Sbjct: 1 MSKNIKTPTNQKILTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQTHTVF+NVSKGQ A K++L
Sbjct: 47 --------------------------------KDIDEVLQTHTVFSNVSKGQLAKKDELI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF EDQ EICK+IL KG+LQ+SDKER + + K+++ +++ +N ETKRP S+
Sbjct: 75 AAFGIEDQFEICKIILDKGDLQVSDKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSV 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
I+ L+++HFS+ N++SKQQAL+ IP L++ + IERA+M++RV + K+ K + KL
Sbjct: 135 IDKALQEMHFSLKPNRSSKQQALDAIPKLRETIKIERAKMKIRVAIPT--KEAKAVHSKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
VE ++W G L ++ LI+PG +R +D+LVR ET+G G LE+L+LK+V EGE
Sbjct: 193 KALFNEVEQDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVVEGE 249
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKILTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTEKDIDEVLQTHTVFS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ A K++L AF EDQ EICK+IL K
Sbjct: 61 NVSKGQLAKKDELIAAFGIEDQFEICKIILDK 92
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 47/70 (67%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ ++ ++ER + + K+++ +++ +N ETKRP S+I+ L+++HFS+
Sbjct: 89 ILDKGDLQVSDKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKP 148
Query: 438 NKNSKQQALE 447
N++SKQQAL+
Sbjct: 149 NRSSKQQALD 158
>gi|341891880|gb|EGT47815.1| hypothetical protein CAEBREN_15867 [Caenorhabditis brenneri]
Length = 253
Score = 267 bits (682), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 139/297 (46%), Positives = 188/297 (63%), Gaps = 49/297 (16%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN E
Sbjct: 1 MSKNIKTPTNQKILTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQTHTVF+NVSKGQ + KE+L
Sbjct: 47 --------------------------------KDIDEVLQTHTVFSNVSKGQLSKKEELM 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF +DQ EICK+IL KG+LQ+S+KER + + K+++ +++ +N ETKRP S+
Sbjct: 75 AAFGIDDQLEICKIILEKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSV 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
I+ L+++HFS+ N++SKQQAL+VIP L++ + IERA+M+VRV + K+ K + KL
Sbjct: 135 IDKALQEMHFSLKPNRSSKQQALDVIPKLRETIKIERAKMKVRVAIPT--KEAKIVHSKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
VE ++W G L ++ LI+PG +R ID+LVR ET+G G LE+L+LK+V EGE
Sbjct: 193 KALFNEVEQDDWQDGSLEMVGLIEPGSFRAIDDLVRNETKGSGRLEILSLKDVVEGE 249
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKILTNVAVVRMKKTGKRFEIACYKNKVVNWRNKTEKDIDEVLQTHTVFS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ + KE+L AF +DQ EICK+IL K
Sbjct: 61 NVSKGQLSKKEELMAAFGIDDQLEICKIILEK 92
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 42/60 (70%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER + + K+++ +++ +N ETKRP S+I+ L+++HFS+ N++SKQQAL+
Sbjct: 99 EKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALD 158
>gi|339259046|ref|XP_003369709.1| ribosome maturation protein SBDS [Trichinella spiralis]
gi|316965935|gb|EFV50571.1| ribosome maturation protein SBDS [Trichinella spiralis]
Length = 270
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/296 (47%), Positives = 190/296 (64%), Gaps = 50/296 (16%)
Query: 92 DMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
+MSKIFTPTNQ+R TNVA+VRMKKAGKRFEIACYKNKV++WR+ IE+
Sbjct: 13 NMSKIFTPTNQMRHTNVAVVRMKKAGKRFEIACYKNKVLNWRSKIER------------- 59
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
DIDEVLQTH +FTNVSKG+ A KEDL
Sbjct: 60 ---------------------------------DIDEVLQTHHIFTNVSKGELAKKEDLL 86
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF T++QTEICK+IL KGELQIS+KER E+ FK+IA I++ C++ ++KRP++ M
Sbjct: 87 NAFATDNQTEICKVILEKGELQISEKERKLYYESSFKEIANIIAGMCVDIKSKRPYSQVM 146
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE L +IHFSV K+SKQQAL++IP LKQ M I+RA+M +RVE A + K KEKL
Sbjct: 147 IETALHEIHFSVRPRKSSKQQALDIIPRLKQHMPIDRAKMVLRVECPAEL--AKAAKEKL 204
Query: 332 VKCATSVENEEW-SGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
+ S E E W G LL + +++P +R+ID LVR+ T +G ++++ ++++ E
Sbjct: 205 NEWVDSFELERWEENGDLLAVVIVEPSYFRQIDSLVRSPT-ARGVVDVITVRQIVE 259
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 82/91 (90%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQ+R TNVA+VRMKKAGKRFEIACYKNKV++WR+ IE+DIDEVLQTH +FTN
Sbjct: 14 MSKIFTPTNQMRHTNVAVVRMKKAGKRFEIACYKNKVLNWRSKIERDIDEVLQTHHIFTN 73
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A KEDL AF T++QTEICK+IL K
Sbjct: 74 VSKGELAKKEDLLNAFATDNQTEICKVILEK 104
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ E+ER E+ FK+IA I++ C++ ++KRP++ MIE L +IHFSV
Sbjct: 101 ILEKGELQISEKERKLYYESSFKEIANIIAGMCVDIKSKRPYSQVMIETALHEIHFSVRP 160
Query: 438 NKNSKQQALE 447
K+SKQQAL+
Sbjct: 161 RKSSKQQALD 170
>gi|432889561|ref|XP_004075289.1| PREDICTED: ribosome maturation protein SBDS-like isoform 2 [Oryzias
latipes]
Length = 228
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/294 (50%), Positives = 183/294 (62%), Gaps = 70/294 (23%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR E
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRTGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 45 ----------------------------KDLDEVLQTPSVFINVSKGQTAKKDDLLKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TEDQTEICK IL KGELQ+SDKER +Q+E F+DIAT V++KC+N ETKRP+ VSMIE
Sbjct: 77 TEDQTEICKQILAKGELQVSDKERQTQLETMFRDIATTVADKCVNPETKRPYPVSMIERV 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
++Q LK+ M I+RA MR+R+++ A K+ K+LKEKL K
Sbjct: 137 IRQ---------------------LKETMEIQRAHMRLRLQLPA--KEAKRLKEKL-KPL 172
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
V E L +ICL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EGEE
Sbjct: 173 LQVVESEEFDEELEMICLVDPGCFREIDELIRCETKGRGSLEVLSLKDVEEGEE 226
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/88 (79%), Positives = 76/88 (86%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRTGAEKDLDEVLQTPSVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF TEDQTEICK IL K
Sbjct: 63 GQTAKKDDLLKAFGTEDQTEICKQILAK 90
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ + D+L++ TE + + ++L E+ ++ER +Q+E F+DIAT V++KC+N
Sbjct: 63 GQTAKKDDLLKAFGTEDQTEICKQILAKGELQVSDKERQTQLETMFRDIATTVADKCVNP 122
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNK 439
ETKRP+ VSMIE ++Q+ ++ + +
Sbjct: 123 ETKRPYPVSMIERVIRQLKETMEIQR 148
>gi|402589103|gb|EJW83035.1| ribosome maturation protein SBDS [Wuchereria bancrofti]
Length = 253
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 191/299 (63%), Gaps = 48/299 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN E
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KDIDEVLQT TVFTNVSKGQ A +E+L A
Sbjct: 47 ------------------------------KDIDEVLQTQTVFTNVSKGQVAKREELNTA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T++Q EICK+IL KG+LQ+S+KER +Q ++ FK++A +++ C+N +TKRP++ S+IE
Sbjct: 77 FGTDNQFEICKIILEKGDLQVSEKERLAQSDSSFKELANLIANMCVNPDTKRPYSSSVIE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L Q H S+ N++ KQQALE+IP L++ M I+RA++R+RV V A K+ K++ ++L
Sbjct: 137 NALHQTHLSLKPNRSVKQQALEIIPKLRESMKIDRAEIRLRVSVEA--KEAKRMHDRLKG 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERS 392
T +E E+W G L ++ LIDPG YR ++EL++ ET+ G LELL LK + EG+ E S
Sbjct: 195 MFTKIEVEDWEQGNLEMVGLIDPGTYRLVEELLQKETKKAGRLELLTLKVIGEGDVEIS 253
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/90 (73%), Positives = 75/90 (83%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I TPTN +TNVA+VRMKK GKRFEIACYKNKVISWRN EKDIDEVLQT TVFTNV
Sbjct: 3 NRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVISWRNKTEKDIDEVLQTQTVFTNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A +E+L AF T++Q EICK+IL K
Sbjct: 63 SKGQVAKREELNTAFGTDNQFEICKIILEK 92
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 44/60 (73%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
E+ER +Q ++ FK++A +++ C+N +TKRP++ S+IE L Q H S+ N++ KQQALE
Sbjct: 99 EKERLAQSDSSFKELANLIANMCVNPDTKRPYSSSVIENALHQTHLSLKPNRSVKQQALE 158
>gi|25144459|ref|NP_497226.2| Protein SBDS-1 [Caenorhabditis elegans]
gi|21431958|sp|Q23202.2|SBDS_CAEEL RecName: Full=Ribosome maturation protein SBDS; AltName:
Full=Shwachman-Bodian-Diamond syndrome protein homolog
gi|373218887|emb|CCD63990.1| Protein SBDS-1 [Caenorhabditis elegans]
Length = 253
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 137/297 (46%), Positives = 188/297 (63%), Gaps = 49/297 (16%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNK---------------- 44
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
EKDIDEVLQTHTVF+NVSKGQ + KE+L
Sbjct: 45 ------------------------------SEKDIDEVLQTHTVFSNVSKGQLSKKEELI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF EDQ EICK+IL KG+LQ+S+KER + + K+++ +++ +N ETKRP S+
Sbjct: 75 AAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSV 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
I+ L+++HFS+ N++SKQQAL+ IP L++ + IERA+M++RV + K+ K + KL
Sbjct: 135 IDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAIPT--KEAKSVHTKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+ VE ++W G L ++ LI+PG +R +D+LVR ET+G G LE+L+LK+V EGE
Sbjct: 193 KTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVVEGE 249
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ + KE+L AF EDQ EICK+IL K
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDK 92
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 47/70 (67%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ ++ E+ER + + K+++ +++ +N ETKRP S+I+ L+++HFS+
Sbjct: 89 ILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKP 148
Query: 438 NKNSKQQALE 447
N++SKQQAL+
Sbjct: 149 NRSSKQQALD 158
>gi|391346102|ref|XP_003747318.1| PREDICTED: ribosome maturation protein SBDS-like [Metaseiulus
occidentalis]
Length = 253
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 143/297 (48%), Positives = 188/297 (63%), Gaps = 51/297 (17%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
SKIFTPTNQIR+TNVAIVRMKK G RFEIACYKNKV+SWRN +E++
Sbjct: 4 SKIFTPTNQIRLTNVAIVRMKKCGTRFEIACYKNKVVSWRNKVERN-------------- 49
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
+DEVLQ V+TNVSKGQ A KEDL K
Sbjct: 50 --------------------------------LDEVLQMQVVYTNVSKGQVAKKEDLVKC 77
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T+DQT+IC+ IL KGELQIS+KER +Q+E+ FKDIA IV++K +N ETKRP+ VS+IE
Sbjct: 78 FGTDDQTKICEEILSKGELQISEKERHTQLESTFKDIANIVADKTVNPETKRPYPVSIIE 137
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K IHFSV N+ +KQQALEVI L+ + ++R QM + + V+ G K K++L
Sbjct: 138 KSMKDIHFSVKPNRTAKQQALEVIRALEDTIDLQRTQMTLHIVVANG----KAHKDRLRD 193
Query: 334 CATSVENEEWS-GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
T V E+ S G L + L DPG +R +D+L+ ET+G+G+LE+++L EV + +E
Sbjct: 194 LVTEVVEEKISERGDLEMTFLTDPGNFRALDDLINKETKGKGSLEVVSLNEVADDDE 250
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 77/90 (85%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
SKIFTPTNQIR+TNVAIVRMKK G RFEIACYKNKV+SWRN +E+++DEVLQ V+TNV
Sbjct: 4 SKIFTPTNQIRLTNVAIVRMKKCGTRFEIACYKNKVVSWRNKVERNLDEVLQMQVVYTNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A KEDL K F T+DQT+IC+ IL K
Sbjct: 64 SKGQVAKKEDLVKCFGTDDQTKICEEILSK 93
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER +Q+E+ FKDIA IV++K +N ETKRP+ VS+IE +K IHFSV
Sbjct: 89 EILSKGELQISEKERHTQLESTFKDIANIVADKTVNPETKRPYPVSIIEKSMKDIHFSVK 148
Query: 437 VNKNSKQQALE 447
N+ +KQQALE
Sbjct: 149 PNRTAKQQALE 159
>gi|403285693|ref|XP_003934147.1| PREDICTED: ribosome maturation protein SBDS [Saimiri boliviensis
boliviensis]
Length = 231
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/277 (52%), Positives = 185/277 (66%), Gaps = 49/277 (17%)
Query: 113 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNM 172
MK+AGKRFEIACYKNKV+ WR+ +E
Sbjct: 1 MKRAGKRFEIACYKNKVVGWRSGVE----------------------------------- 25
Query: 173 LNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGEL 232
KD+DEVLQTH+VF NVSKGQ A KE L AF T+DQTEICK IL KGE+
Sbjct: 26 -----------KDLDEVLQTHSVFVNVSKGQVAKKEHLISAFGTDDQTEICKQILTKGEV 74
Query: 233 QISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 292
Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV NK++KQQ
Sbjct: 75 QVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQ 134
Query: 293 ALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLIC 352
ALEVI LK+ M IERA MR+R + V + KKLKEKL +E+E++ G L ++C
Sbjct: 135 ALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLIKVIESEDY-GQKLEIVC 191
Query: 353 LIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
LIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 192 LIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 228
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/71 (74%), Positives = 60/71 (84%)
Query: 21 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 80
MK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSKGQ A KE L AF T+D
Sbjct: 1 MKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEHLISAFGTDD 60
Query: 81 QTEICKLILMK 91
QTEICK IL K
Sbjct: 61 QTEICKQILTK 71
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 67 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 126
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 127 TNKSTKQQALE 137
>gi|405976904|gb|EKC41382.1| Ribosome maturation protein SBDS [Crassostrea gigas]
Length = 251
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 145/295 (49%), Positives = 193/295 (65%), Gaps = 51/295 (17%)
Query: 97 FTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG 156
F PT Q R+TNVA+VR+KK GKRFEIACY NKV+SWRN +E
Sbjct: 4 FQPTGQKRLTNVAVVRLKKGGKRFEIACYPNKVVSWRNKVET------------------ 45
Query: 157 QAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNT 216
DIDEVLQTHT+F NVSKG+ A EDLKK F T
Sbjct: 46 ----------------------------DIDEVLQTHTIFVNVSKGEVAKNEDLKKVFGT 77
Query: 217 EDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 276
++Q EIC IL KGELQ+S+KER +Q+E+ F+DIAT VS+KC+N +T RP+TV++IE +
Sbjct: 78 DNQPEICLQILKKGELQVSEKERHAQLESMFRDIATTVSDKCVNPKTNRPYTVTLIEKAM 137
Query: 277 KQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
K +HFSV NK++KQQALEVI LK + + I+RA MR+R+ V KK+K+KL K
Sbjct: 138 KDLHFSVKPNKSTKQQALEVIKQLKETETIDIQRALMRIRITVPGKDG--KKVKDKLKKL 195
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
A VE E++S L ++ L+DPG +REID+LVR +T+G+G LE+++LK++ EG+E
Sbjct: 196 AAKVEEEDFS-PDLEMVILVDPGCFREIDDLVRADTKGRGQLEVISLKDIEEGDE 249
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 70/87 (80%)
Query: 5 FTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG 64
F PT Q R+TNVA+VR+KK GKRFEIACY NKV+SWRN +E DIDEVLQTHT+F NVSKG
Sbjct: 4 FQPTGQKRLTNVAVVRLKKGGKRFEIACYPNKVVSWRNKVETDIDEVLQTHTIFVNVSKG 63
Query: 65 QAANKEDLKKAFNTEDQTEICKLILMK 91
+ A EDLKK F T++Q EIC IL K
Sbjct: 64 EVAKNEDLKKVFGTDNQPEICLQILKK 90
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 65/91 (71%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K ++ ++ T+ + + L++L E+ E+ER +Q+E+ F+DIAT VS+KC+N +T
Sbjct: 66 AKNEDLKKVFGTDNQPEICLQILKKGELQVSEKERHAQLESMFRDIATTVSDKCVNPKTN 125
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+TV++IE +K +HFSV NK++KQQALE
Sbjct: 126 RPYTVTLIEKAMKDLHFSVKPNKSTKQQALE 156
>gi|324512687|gb|ADY45248.1| Ribosome maturation protein SBDS [Ascaris suum]
Length = 232
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 131/280 (46%), Positives = 178/280 (63%), Gaps = 48/280 (17%)
Query: 113 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNM 172
MKK GKRFEIACYKNKV++WRN E
Sbjct: 1 MKKCGKRFEIACYKNKVVNWRNRTE----------------------------------- 25
Query: 173 LNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGEL 232
KDIDEVLQT TVFTNVSKG A +E+L AF TEDQ EICKLIL KG+L
Sbjct: 26 -----------KDIDEVLQTPTVFTNVSKGMVAKREELNAAFGTEDQMEICKLILDKGDL 74
Query: 233 QISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 292
Q+S+KER Q E+ FK++A I++ C+N ETKRP+++++IE L +HFS+ N+++KQQ
Sbjct: 75 QVSEKERQVQSESSFKEVANIIANMCVNPETKRPYSLAVIEKALHDLHFSLKPNRSAKQQ 134
Query: 293 ALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLIC 352
ALE++P L++ M I+RA+MR+R+ V A K+ K++ ++L +S+E E+W G L ++
Sbjct: 135 ALEMVPKLREIMKIDRAEMRLRISVEA--KEAKRVHDRLKALFSSIEVEDWDQGNLEIVG 192
Query: 353 LIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERS 392
LIDPG YR IDEL+R ET+ +ELL+LK + EG+ E S
Sbjct: 193 LIDPGSYRAIDELMRKETKNCARMELLSLKVINEGDIEIS 232
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 59/71 (83%)
Query: 21 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 80
MKK GKRFEIACYKNKV++WRN EKDIDEVLQT TVFTNVSKG A +E+L AF TED
Sbjct: 1 MKKCGKRFEIACYKNKVVNWRNRTEKDIDEVLQTPTVFTNVSKGMVAKREELNAAFGTED 60
Query: 81 QTEICKLILMK 91
Q EICKLIL K
Sbjct: 61 QMEICKLILDK 71
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K E++ TE + + +L+ ++ E+ER Q E+ FK++A I++ C+N ETK
Sbjct: 47 AKREELNAAFGTEDQMEICKLILDKGDLQVSEKERQVQSESSFKEVANIIANMCVNPETK 106
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+++++IE L +HFS+ N+++KQQALE
Sbjct: 107 RPYSLAVIEKALHDLHFSLKPNRSAKQQALE 137
>gi|167533841|ref|XP_001748599.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772840|gb|EDQ86486.1| predicted protein [Monosiga brevicollis MX1]
Length = 601
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/296 (43%), Positives = 185/296 (62%), Gaps = 49/296 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++FTPTNQ +TN+A+VR KK GKRFEIAC+KNKV+SWRN +E
Sbjct: 353 ARMFTPTNQKLLTNIAVVRQKKGGKRFEIACFKNKVLSWRNKVE---------------- 396
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KDIDEVLQ HTV+TNVSKG+ A DL+KA
Sbjct: 397 ------------------------------KDIDEVLQIHTVYTNVSKGEVAKNTDLQKA 426
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
+ T+D T+IC++IL KGELQ+S +ER +Q+ FK++ATIV++KCI+ T+RP+T + IE
Sbjct: 427 YGTDDHTKICRIILDKGELQVSKEERDAQLGALFKEVATIVADKCIDPATERPYTAAQIE 486
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
++ IH SV ++K QAL+VI L + +SI RA M VRV + ++ K++K ++
Sbjct: 487 RAMRDIHVSVKPTASAKAQALDVIKKLAETISIARASMSVRVRLPQ--REAKRVKPLVLP 544
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
++E+E+W L L C IDPG +R + ELV ET+GQG +E+L++K V EG+E
Sbjct: 545 LTIALEHEDWD-DDLELECTIDPGTFRALTELVGHETKGQGLVEILSVKNVAEGDE 599
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 77/90 (85%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++FTPTNQ +TN+A+VR KK GKRFEIAC+KNKV+SWRN +EKDIDEVLQ HTV+TNV
Sbjct: 353 ARMFTPTNQKLLTNIAVVRQKKGGKRFEIACFKNKVLSWRNKVEKDIDEVLQIHTVYTNV 412
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKG+ A DL+KA+ T+D T+IC++IL K
Sbjct: 413 SKGEVAKNTDLQKAYGTDDHTKICRIILDK 442
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ +EER +Q+ FK++ATIV++KCI+ T+RP+T + IE ++ IH SV
Sbjct: 439 ILDKGELQVSKEERDAQLGALFKEVATIVADKCIDPATERPYTAAQIERAMRDIHVSVKP 498
Query: 438 NKNSKQQALE 447
++K QAL+
Sbjct: 499 TASAKAQALD 508
>gi|209732830|gb|ACI67284.1| Ribosome maturation protein SBDS [Salmo salar]
Length = 228
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/294 (50%), Positives = 184/294 (62%), Gaps = 71/294 (24%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWR---------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
S EKD+DEVLQT +VF NVSKGQ A K+DL KAF
Sbjct: 41 ------------------------SGAEKDLDEVLQTSSVFNNVSKGQVAKKDDLSKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TE CK IL KGELQ+SDKER SQ+E F+DIATIV+EKC+N ETKRP+TV++I
Sbjct: 77 TDDLTERCKQILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLI--- 133
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
EVI LK + I+RA MR+R+ + VKD K+LKEKL
Sbjct: 134 -------------------EVIRQLKDSIEIQRAHMRLRLVLP--VKDGKRLKEKLKPLL 172
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
VE+E++ L ++CL+DPG +REIDEL+R ET+G+G+LE+L+LK+V EG+E
Sbjct: 173 KVVESEDFD-DQLEMVCLVDPGCFREIDELIRCETKGKGSLEVLSLKDVEEGDE 225
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 75/88 (85%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMKK GKRFEIACYKNKV+SWR+ EKD+DEVLQT +VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTSSVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A K+DL KAF T+D TE CK IL K
Sbjct: 63 GQVAKKDDLSKAFGTDDLTERCKQILAK 90
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TV++IE ++Q+ S+
Sbjct: 86 QILAKGELQVSDKERQSQLETSFRDIATIVAEKCVNPETKRPYTVNLIEV-IRQLKDSIE 144
Query: 437 VNK 439
+ +
Sbjct: 145 IQR 147
>gi|225714404|gb|ACO13048.1| Ribosome maturation protein SBDS [Lepeophtheirus salmonis]
Length = 251
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 188/299 (62%), Gaps = 52/299 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IE
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ+HT+F NVSKGQ A KED+ K
Sbjct: 46 -------------------------------KDIDEVLQSHTLFANVSKGQTAKKEDIAK 74
Query: 213 AFN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF+ DQTEICK+IL KG+LQ+SDKER +Q FKD+AT +S KC+N +TKRP+++SM
Sbjct: 75 AFDGVTDQTEICKIILQKGDLQVSDKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +K+ H ++ NK++KQQ + + L+ +SIE A+M+V++ V K +K++L
Sbjct: 135 IEKAMKECHIAIKPNKSAKQQVRDAVLKLQASISIEIARMQVKLIFP--VSCTKPMKKEL 192
Query: 332 VKCATSVENEEWSG-GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
S E E+ + G ++I IDPG YR I+E +R+ T+G+G++ELL LKEV E EE
Sbjct: 193 --SGISFEKEDTTDEGECVIIAFIDPGDYRNIEESIRSVTKGKGSMELLTLKEVIEEEE 249
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IEKDIDEVLQ+HT+F N
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIEKDIDEVLQSHTLFAN 60
Query: 61 VSKGQAANKEDLKKAFN-TEDQTEICKLILMK 91
VSKGQ A KED+ KAF+ DQTEICK+IL K
Sbjct: 61 VSKGQTAKKEDIAKAFDGVTDQTEICKIILQK 92
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 444
++ER +Q FKD+AT +S KC+N +TKRP+++SMIE +K+ H ++ NK++KQQ
Sbjct: 99 DKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISMIEKAMKECHIAIKPNKSAKQQ 155
>gi|290461987|gb|ADD24041.1| Ribosome maturation protein SBDS [Lepeophtheirus salmonis]
Length = 251
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 188/299 (62%), Gaps = 52/299 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IE
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ+HT+F NVSKGQ A KED+ K
Sbjct: 46 -------------------------------KDIDEVLQSHTLFANVSKGQTAKKEDIAK 74
Query: 213 AFN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF+ DQTEICK+IL KG+LQ+SDKER +Q FKD+AT +S KC+N +TKRP+++SM
Sbjct: 75 AFDGVTDQTEICKIILQKGDLQVSDKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +K+ H ++ NK++KQQ + + L+ +SIE A+M+V++ V K +K++L
Sbjct: 135 IEKAMKECHIAIKPNKSAKQQVRDTVLKLQASISIEIARMQVKLIFP--VSCTKPMKKEL 192
Query: 332 VKCATSVENEEWSG-GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
S E E+ + G ++I IDPG YR I+E +R+ T+G+G++ELL LKEV E EE
Sbjct: 193 --SGISFEKEDTTDEGECVIIAFIDPGDYRNIEESIRSVTKGKGSMELLTLKEVIEEEE 249
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IEKDIDEVLQ+HT+F N
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIEKDIDEVLQSHTLFAN 60
Query: 61 VSKGQAANKEDLKKAFN-TEDQTEICKLILMK 91
VSKGQ A KED+ KAF+ DQTEICK+IL K
Sbjct: 61 VSKGQTAKKEDIAKAFDGVTDQTEICKIILQK 92
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 444
++ER +Q FKD+AT +S KC+N +TKRP+++SMIE +K+ H ++ NK++KQQ
Sbjct: 99 DKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISMIEKAMKECHIAIKPNKSAKQQ 155
>gi|290561180|gb|ADD37992.1| Ribosome maturation protein SBDS [Lepeophtheirus salmonis]
Length = 251
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 140/299 (46%), Positives = 187/299 (62%), Gaps = 52/299 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IE
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ+HT+F NVSKGQ A KED+ K
Sbjct: 46 -------------------------------KDIDEVLQSHTLFANVSKGQTAKKEDIAK 74
Query: 213 AFN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF+ DQTEICK+IL KG+LQ+SDKER +Q FKD+AT +S KC+N +TKRP+++SM
Sbjct: 75 AFDGVTDQTEICKIILQKGDLQVSDKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +K+ H ++ NK++KQQ + + L+ +SIE A+M+V++ V K +K++L
Sbjct: 135 IEKAMKECHIAIKPNKSAKQQVRDTVLKLQASISIEIARMQVKLIFP--VSCTKPMKKEL 192
Query: 332 VKCATSVENEEWSG-GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
S E E + G ++I IDPG YR I+E +R+ T+G+G++ELL LKEV E EE
Sbjct: 193 --SGISFEKEGTTDEGECVIIAFIDPGDYRNIEESIRSVTKGKGSMELLTLKEVIEEEE 249
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/92 (75%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS+I TPTNQ +TNVA+VR+KKAGKRFEIACYKNKV+SWR IEKDIDEVLQ+HT+F N
Sbjct: 1 MSRINTPTNQKLLTNVAVVRIKKAGKRFEIACYKNKVLSWRQGIEKDIDEVLQSHTLFAN 60
Query: 61 VSKGQAANKEDLKKAFN-TEDQTEICKLILMK 91
VSKGQ A KED+ KAF+ DQTEICK+IL K
Sbjct: 61 VSKGQTAKKEDIAKAFDGVTDQTEICKIILQK 92
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 444
++ER +Q FKD+AT +S KC+N +TKRP+++SMIE +K+ H ++ NK++KQQ
Sbjct: 99 DKERVAQQGALFKDLATTLSNKCVNPDTKRPYSISMIEKAMKECHIAIKPNKSAKQQ 155
>gi|66823573|ref|XP_645141.1| Shwachman-Bodian-Diamond syndrome protein [Dictyostelium discoideum
AX4]
gi|74861630|sp|Q86KZ5.2|SBDS_DICDI RecName: Full=Ribosome maturation protein SBDS
gi|60473368|gb|EAL71314.1| Shwachman-Bodian-Diamond syndrome protein [Dictyostelium discoideum
AX4]
Length = 274
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 129/294 (43%), Positives = 183/294 (62%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N +TN+ +VR KK +FEIACY +KV S+R+ I
Sbjct: 3 IFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKI------------------- 43
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
EKD++EV+Q H +FTNVSKG A K++L KAF
Sbjct: 44 ---------------------------EKDLNEVIQIHRIFTNVSKGIIAKKDELIKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+++ EI LIL KGELQ+S KER +Q E FKDIATIV+EKC+NTET+RP VS+IE
Sbjct: 77 TDNEQEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVNTETQRPIPVSIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKL-KEKLVKC 334
+K +H+S++ K+SKQQ+LEVI + + I+RAQMR+ + + K+ K L ++KL+
Sbjct: 137 MKDVHYSIHPTKSSKQQSLEVIKQISSVIPIQRAQMRLNITIPT--KESKTLNRDKLMVL 194
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+ +E E+ GGGL ++CL+DPG YR+IDEL++ ET+G+G ++++NL EGE
Sbjct: 195 VSKIEEEDRDGGGLSIVCLVDPGSYRKIDELIKQETKGKGFIDIINLAVAKEGE 248
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 65/88 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N +TN+ +VR KK +FEIACY +KV S+R+ IEKD++EV+Q H +FTNVSK
Sbjct: 3 IFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKIEKDLNEVIQIHRIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A K++L KAF T+++ EI LIL K
Sbjct: 63 GIIAKKDELIKAFGTDNEQEIILLILEK 90
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
DEL++ T+ + L +L E+ +ER +Q E FKDIATIV+EKC+NTET+RP
Sbjct: 69 DELIKAFGTDNEQEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVNTETQRPI 128
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
VS+IE +K +H+S++ K+SKQQ+LE
Sbjct: 129 PVSIIEKAMKDVHYSIHPTKSSKQQSLE 156
>gi|330802083|ref|XP_003289050.1| hypothetical protein DICPUDRAFT_94809 [Dictyostelium purpureum]
gi|325080884|gb|EGC34421.1| hypothetical protein DICPUDRAFT_94809 [Dictyostelium purpureum]
Length = 275
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/299 (44%), Positives = 185/299 (61%), Gaps = 50/299 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N +TN+AIVR KK RFEIACY +KV S+RN I
Sbjct: 3 IFTPVNNKTLTNIAIVRFKKGAARFEIACYPSKVQSYRNKI------------------- 43
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
EKD++EV+Q H +FTNVSKG A K++L KAF
Sbjct: 44 ---------------------------EKDLNEVIQIHRIFTNVSKGVIAKKDELMKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T++++EI LIL KGELQ+S KER +Q E FKDIATIV+EKC+NTET+RP VS+IE
Sbjct: 77 TDNESEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVNTETQRPIPVSIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKL-KEKLVKC 334
++ +H+S++ K+SKQQ+LEVI + + I+RAQMR+ + V K+ K L ++KL+
Sbjct: 137 MRDVHYSIHPTKSSKQQSLEVIKQISTVIPIQRAQMRLNITVPP--KEAKSLNRDKLMVL 194
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSS 393
+ +E EE GL ++CL+DPG +R+IDE V+ ET+G+G +E++NL EGE + SS
Sbjct: 195 ISKIE-EEDHDEGLSIVCLVDPGSFRKIDEFVKQETKGKGFIEIMNLAVAKEGETKISS 252
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N +TN+AIVR KK RFEIACY +KV S+RN IEKD++EV+Q H +FTNVSK
Sbjct: 3 IFTPVNNKTLTNIAIVRFKKGAARFEIACYPSKVQSYRNKIEKDLNEVIQIHRIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A K++L KAF T++++EI LIL K
Sbjct: 63 GVIAKKDELMKAFGTDNESEIILLILEK 90
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
DEL++ T+ + L +L E+ +ER +Q E FKDIATIV+EKC+NTET+RP
Sbjct: 69 DELMKAFGTDNESEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVNTETQRPI 128
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
VS+IE ++ +H+S++ K+SKQQ+LE
Sbjct: 129 PVSIIEKAMRDVHYSIHPTKSSKQQSLE 156
>gi|328766908|gb|EGF76960.1| hypothetical protein BATDEDRAFT_14442 [Batrachochytrium
dendrobatidis JAM81]
Length = 246
Score = 248 bits (632), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/293 (44%), Positives = 185/293 (63%), Gaps = 51/293 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q+++TNV+IVR+KK GKRFEIACYKNK++ WR+ +E
Sbjct: 3 PVAQVKLTNVSIVRLKKGGKRFEIACYKNKILEWRSRVE--------------------- 41
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+D VLQ + VF NVSKGQ A+K+DL KAF TE+
Sbjct: 42 -------------------------KDLDNVLQINQVFLNVSKGQVASKDDLIKAFQTEN 76
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
E+ + IL KG++Q+ +KER+ Q++N ++DIAT+V+EK +N ETKRP+TV+MIE L
Sbjct: 77 SEEVVRQILEKGDIQVGEKERTQQLDNMYRDIATVVAEKSVNPETKRPYTVTMIEKALSD 136
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
IHFSV+ NK +KQQA+E I L + + I RAQMR+RV + A KD K+LK+K+ + T
Sbjct: 137 IHFSVHPNKGAKQQAIEAIKLLNESKTIPISRAQMRLRVIMPA--KDGKRLKDKIAQIIT 194
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+VE E+WS LI +IDPG +R+I +L++ ET+G+G +E+L L E E+
Sbjct: 195 NVEVEDWS-DDYELITVIDPGSFRKITDLLQEETKGRGQVEVLTLNESVADEQ 246
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 68/85 (80%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q+++TNV+IVR+KK GKRFEIACYKNK++ WR+ +EKD+D VLQ + VF NVSKGQ
Sbjct: 3 PVAQVKLTNVSIVRLKKGGKRFEIACYKNKILEWRSRVEKDLDNVLQINQVFLNVSKGQV 62
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+K+DL KAF TE+ E+ + IL K
Sbjct: 63 ASKDDLIKAFQTENSEEVVRQILEK 87
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 66/94 (70%), Gaps = 3/94 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ D+L++ TE + ++L ++ GE+ER+ Q++N ++DIAT+V+EK +N
Sbjct: 60 GQVASKDDLIKAFQTENSEEVVRQILEKGDIQVGEKERTQQLDNMYRDIATVVAEKSVNP 119
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ETKRP+TV+MIE L IHFSV+ NK +KQQA+E
Sbjct: 120 ETKRPYTVTMIEKALSDIHFSVHPNKGAKQQAIE 153
>gi|449282022|gb|EMC88944.1| Ribosome maturation protein SBDS, partial [Columba livia]
Length = 207
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/207 (62%), Positives = 165/207 (79%), Gaps = 3/207 (1%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
EKD+DEVLQTHTVF NVSKGQ A K+DL KAF T+DQTEICK+IL KGELQ+SDKER +Q
Sbjct: 1 EKDLDEVLQTHTVFVNVSKGQVAKKDDLVKAFGTDDQTEICKMILSKGELQVSDKERHTQ 60
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV NK++KQQALEVI LK+
Sbjct: 61 LEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKE 120
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI 362
M IERA MR+R + A KKLKEKL +ENE++ L ++CLIDPG +REI
Sbjct: 121 TMQIERAHMRLRFLLPAKEG--KKLKEKLKPLIKVIENEDFH-EQLEIVCLIDPGCFREI 177
Query: 363 DELVRTETRGQGTLELLNLKEVTEGEE 389
DEL+R+E++G+GTLE+L+LK+V EG+E
Sbjct: 178 DELIRSESKGKGTLEVLSLKDVEEGDE 204
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 55/70 (78%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 44 ILSKGELQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKP 103
Query: 438 NKNSKQQALE 447
NK++KQQALE
Sbjct: 104 NKSTKQQALE 113
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 41/47 (87%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
EKD+DEVLQTHTVF NVSKGQ A K+DL KAF T+DQTEICK+IL K
Sbjct: 1 EKDLDEVLQTHTVFVNVSKGQVAKKDDLVKAFGTDDQTEICKMILSK 47
>gi|345320689|ref|XP_003430330.1| PREDICTED: LOW QUALITY PROTEIN: ribosome maturation protein
SBDS-like [Ornithorhynchus anatinus]
Length = 224
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 167/210 (79%), Gaps = 3/210 (1%)
Query: 180 SFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKER 239
+ EKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL KGE+Q+SDKER
Sbjct: 15 TIHEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKER 74
Query: 240 SSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPT 299
+Q E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV NK++KQQALEVI
Sbjct: 75 HTQXEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKANKSTKQQALEVIKQ 134
Query: 300 LKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKY 359
LK+ M IERA MRV++ + + ++ KKLKEKL +ENE++ G L ++CLIDPG +
Sbjct: 135 LKESMKIERAHMRVKLVLPS--REGKKLKEKLKPLIKVIENEDF-GDQLEIVCLIDPGCF 191
Query: 360 REIDELVRTETRGQGTLELLNLKEVTEGEE 389
REIDEL+++ET+G+G+LE+LNLK+V EG+E
Sbjct: 192 REIDELIQSETKGRGSLEVLNLKDVEEGDE 221
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 60 QILTKGEVQVSDKERHTQXEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 119
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 120 ANKSTKQQALE 130
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
EKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL K
Sbjct: 18 EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTK 64
>gi|281207651|gb|EFA81831.1| Shwachman-Bodian-Diamond syndrome protein [Polysphondylium pallidum
PN500]
Length = 299
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/297 (43%), Positives = 178/297 (59%), Gaps = 52/297 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N +TNVAIVR KK G RFEIACY +KV SWR +
Sbjct: 3 IFTPVNNKTLTNVAIVRYKKGGARFEIACYPSKVTSWRTKV------------------- 43
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
EKD++EV+Q H +FTNVSKG A K++L KAF
Sbjct: 44 ---------------------------EKDLNEVIQIHRIFTNVSKGVVAKKDELIKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D+ EI IL KGELQ+S KER S + F+DIATIV+EKC+N ET+RP V +IE
Sbjct: 77 TDDEREILLQILDKGELQVSSKERESHSDQTFRDIATIVAEKCVNPETQRPIPVGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K +H+S++ K+SKQQ+LEVI + + I+RAQMR+ + V KD + L++KL
Sbjct: 137 MKDVHYSLHPTKSSKQQSLEVIKLISTVIPIQRAQMRLNITVPG--KDARLLRDKLAAQV 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL---KEVTEGEE 389
+E E++ G + ++CLIDPG +R++D+ V+ ET+G+G +E+++L KE E EE
Sbjct: 195 AKIEEEDYDNG-MDMVCLIDPGAFRKLDDFVKFETKGKGFIEIMSLAVAKEEKENEE 250
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 65/88 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N +TNVAIVR KK G RFEIACY +KV SWR +EKD++EV+Q H +FTNVSK
Sbjct: 3 IFTPVNNKTLTNVAIVRYKKGGARFEIACYPSKVTSWRTKVEKDLNEVIQIHRIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A K++L KAF T+D+ EI IL K
Sbjct: 63 GVVAKKDELIKAFGTDDEREILLQILDK 90
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 60/88 (68%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
DEL++ T+ + L++L+ E+ +ER S + F+DIATIV+EKC+N ET+RP
Sbjct: 69 DELIKAFGTDDEREILLQILDKGELQVSSKERESHSDQTFRDIATIVAEKCVNPETQRPI 128
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
V +IE +K +H+S++ K+SKQQ+LE
Sbjct: 129 PVGIIEKAMKDVHYSLHPTKSSKQQSLE 156
>gi|328872606|gb|EGG20973.1| Shwachman-Bodian-Diamond syndrome protein [Dictyostelium
fasciculatum]
Length = 249
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/294 (42%), Positives = 180/294 (61%), Gaps = 49/294 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N +TN+A+VR KK G RFEIACY +KV SWR I
Sbjct: 3 IFTPVNNKTLTNIAVVRFKKGGARFEIACYPSKVTSWRTKI------------------- 43
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
EKD++EV+Q H +FTNVSKG A KE+L KAFN
Sbjct: 44 ---------------------------EKDLNEVIQIHRIFTNVSKGVVAKKEELLKAFN 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+ + EI IL KGELQ+S KER + + F+DIA +V+EKC+NTET+RP V +IE
Sbjct: 77 TDKEDEIILTILEKGELQVSSKERENHADQTFRDIANLVAEKCVNTETQRPIPVGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
++ +H+S++ K+SKQQ+LEVI + + I+RAQMR+ + ++ +KD K L++K+
Sbjct: 137 MRDVHYSIHPTKSSKQQSLEVIKQIGAIIPIQRAQMRLNITLT--LKDPKALRDKIATQV 194
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+E EE + GL ++CL+DPG +R++D+LV+ E++G+G +E++NL EGE+
Sbjct: 195 FKIE-EEDNENGLSMVCLVDPGSFRKLDDLVKQESKGKGFIEIMNLAVAKEGEQ 247
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 65/88 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N +TN+A+VR KK G RFEIACY +KV SWR IEKD++EV+Q H +FTNVSK
Sbjct: 3 IFTPVNNKTLTNIAVVRFKKGGARFEIACYPSKVTSWRTKIEKDLNEVIQIHRIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A KE+L KAFNT+ + EI IL K
Sbjct: 63 GVVAKKEELLKAFNTDKEDEIILTILEK 90
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 62/105 (59%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K E+ + T+ + L +L E+ +ER + + F+DIA +V+EKC+NTET+
Sbjct: 66 AKKEELLKAFNTDKEDEIILTILEKGELQVSSKERENHADQTFRDIANLVAEKCVNTETQ 125
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDKTSGIYSSLYKA 461
RP V +IE ++ +H+S++ K+SKQQ+LE K G + +A
Sbjct: 126 RPIPVGIIEKAMRDVHYSIHPTKSSKQQSLEVIKQIGAIIPIQRA 170
>gi|452820132|gb|EME27179.1| transcription factor isoform 2 [Galdieria sulphuraria]
Length = 266
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 182/290 (62%), Gaps = 32/290 (11%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q+R+TNV +VR+KK GKRFEIACY+NKV+SWRN EKD+DEVLQ VF+NVSKG
Sbjct: 5 PVTQVRLTNVVVVRLKKHGKRFEIACYRNKVLSWRNGTEKDLDEVLQVENVFSNVSKGVV 64
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
ANK+ + E++ V N S G A +DL +AF T D
Sbjct: 65 ANKK-----------------------VKELI----VAVNNSDGLRA--QDLLEAFQTTD 95
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+IC IL KGELQ+SDKER++ E+ +IATIV+ KCI+ ET RP TVS E +K
Sbjct: 96 IRKICVEILNKGELQVSDKERNTVYESLVHEIATIVANKCIDVETNRPLTVSRAEKEMKN 155
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
IHFSV K++KQQALEVI L++ I RA MR++++ A +K ++LK+++ C V
Sbjct: 156 IHFSVVPKKSAKQQALEVIRKLEEKGHIRRASMRIKIQ--APLKYAEELKQRMKNCIIHV 213
Query: 339 ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
E+EE G + LIDPG YREID +++ ET G E+L+L + EGE
Sbjct: 214 ESEERE-GNFRTVVLIDPGSYREIDNILKEETNRDGFFEVLSLAAIEEGE 262
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 66/102 (64%), Gaps = 17/102 (16%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q+R+TNV +VR+KK GKRFEIACY+NKV+SWRN EKD+DEVLQ VF+NVSKG
Sbjct: 5 PVTQVRLTNVVVVRLKKHGKRFEIACYRNKVLSWRNGTEKDLDEVLQVENVFSNVSKGVV 64
Query: 67 ANK-----------------EDLKKAFNTEDQTEICKLILMK 91
ANK +DL +AF T D +IC IL K
Sbjct: 65 ANKKVKELIVAVNNSDGLRAQDLLEAFQTTDIRKICVEILNK 106
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+E+LN E+ ++ER++ E+ +IATIV+ KCI+ ET RP TVS E +K IHFSV
Sbjct: 101 VEILNKGELQVSDKERNTVYESLVHEIATIVANKCIDVETNRPLTVSRAEKEMKNIHFSV 160
Query: 436 NVNKNSKQQALE 447
K++KQQALE
Sbjct: 161 VPKKSAKQQALE 172
>gi|255558444|ref|XP_002520247.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
communis]
gi|223540466|gb|EEF42033.1| Shwachman-Bodian-Diamond syndrome protein, putative [Ricinus
communis]
Length = 356
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 184/297 (61%), Gaps = 52/297 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KD+DEVLQ+HTV++NVSKG A +DL+
Sbjct: 47 --------------------------------KDLDEVLQSHTVYSNVSKGVLAKSKDLE 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF T+DQT+IC IL KGELQ++ KER SQ+ +QF+DIAT+V +K +N ET+RP+T+SM
Sbjct: 75 KAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQKTVNPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +IHF+V+ + +SK+QALEVI L++ I+R+ MR+R+ +S ++ L EKL
Sbjct: 135 IERLMHEIHFAVDPHSSSKKQALEVIRELQKHFPIKRSPMRLRLAISE--PNISSLLEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+V +++ SG L +IC +DPG +RE D LVR QG LE+L + EG+
Sbjct: 193 NTWNATVVSKDESGSQLSVICELDPGLFRECDVLVRN---LQGRLEILAMSVHFEGD 246
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKD+DEVLQ+HTV++
Sbjct: 1 MSKSLMQPIGQKRLTNVAVVRLKKHGFRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL+KAF T+DQT+IC IL K
Sbjct: 61 NVSKGVLAKSKDLEKAFGTDDQTKICLEILEK 92
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 65/91 (71%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +++++ T+ + + LE+L E+ +ER SQ+ +QF+DIAT+V +K +N ET+
Sbjct: 68 AKSKDLEKAFGTDDQTKICLEILEKGELQVAGKERESQLTSQFRDIATMVMQKTVNPETQ 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+T+SMIE + +IHF+V+ + +SK+QALE
Sbjct: 128 RPYTISMIERLMHEIHFAVDPHSSSKKQALE 158
>gi|443897957|dbj|GAC75295.1| predicted exosome subunit [Pseudozyma antarctica T-34]
Length = 254
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 175/295 (59%), Gaps = 51/295 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQI++TNV+IVR++K GKRFEIACYKNKV WR +E
Sbjct: 3 VFQPANQIKLTNVSIVRLRKGGKRFEIACYKNKVREWRTGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEV+Q VF NVSKGQ A +DL+KAF
Sbjct: 46 -----------------------------DLDEVVQIENVFLNVSKGQVAPSDDLQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D +I + IL KGELQ+ +KER ++ N ++DIAT V+EKC++ ++RP+TV MIE
Sbjct: 77 TTDIAKILQEILKKGELQVGEKERQHELANTWRDIATQVAEKCVDPGSQRPYTVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +H+SV +++KQQAL+VI L K+ M IERA+MR+R+ + A KD KKLK K++
Sbjct: 137 MHDVHYSVKTGRSAKQQALDVIRLLQEKKTMPIERARMRIRITMPA--KDGKKLKPKILA 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
++++E+W G L+ IDPG + I+ELV E +G+ +E LN + EG+
Sbjct: 195 LTHAIDDEDW-GEDWELVAFIDPGALKAINELVEAEIKGRANVETLNFTTIREGD 248
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQI++TNV+IVR++K GKRFEIACYKNKV WR +E D+DEV+Q VF NVSK
Sbjct: 3 VFQPANQIKLTNVSIVRLRKGGKRFEIACYKNKVREWRTGVETDLDEVVQIENVFLNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A +DL+KAF T D +I + IL K
Sbjct: 63 GQVAPSDDLQKAFGTTDIAKILQEILKK 90
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 51/71 (71%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER ++ N ++DIAT V+EKC++ ++RP+TV MIE + +H+SV
Sbjct: 86 EILKKGELQVGEKERQHELANTWRDIATQVAEKCVDPGSQRPYTVGMIEKAMHDVHYSVK 145
Query: 437 VNKNSKQQALE 447
+++KQQAL+
Sbjct: 146 TGRSAKQQALD 156
>gi|299473361|emb|CBN77759.1| SBDS domain, zinc finger protein [Ectocarpus siliculosus]
Length = 493
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 179/301 (59%), Gaps = 54/301 (17%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ T P NQ+R+TNVA+VR+ K GKRFEIACY+NKV++WRN +E
Sbjct: 1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVET------------- 47
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
D+DEVLQ +VF NVSKG A +DL
Sbjct: 48 ---------------------------------DLDEVLQIESVFENVSKGVLAKNKDLM 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF T++Q E C++IL KGE+Q+SDKER +E+ F+D+ATIVSEKC+N + RP+TVSM
Sbjct: 75 KAFGTDNQLESCRIILDKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE ++ +HFS + +++KQQALEVI LK+ M I+RA+M++R+ +D LKE L
Sbjct: 135 IEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRITTD---EDSTPLKEAL 191
Query: 332 VKCAT-SVENEEWSGGGL---LLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
+ S EN + G +L L+DPG YR+++E VRT G+ LE+L L EG
Sbjct: 192 GELGVDSFENGGGAAAGSSGEVLDFLVDPGLYRDVEEAVRTVASGRCALEVLQLSVQQEG 251
Query: 388 E 388
E
Sbjct: 252 E 252
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ T P NQ+R+TNVA+VR+ K GKRFEIACY+NKV++WRN +E D+DEVLQ +VF
Sbjct: 1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFE 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNV 108
NVSKG A +DL KAF T++Q E C++IL K ++ Q+ + +V
Sbjct: 61 NVSKGVLAKNKDLMKAFGTDNQLESCRIILDKGEMQVSDKERQVALESV 109
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER +E+ F+D+ATIVSEKC+N + RP+TVSMIE ++ +HFS +
Sbjct: 89 ILDKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHP 148
Query: 438 NKNSKQQALE 447
+++KQQALE
Sbjct: 149 TRSAKQQALE 158
>gi|21554225|gb|AAM63300.1| unknown [Arabidopsis thaliana]
Length = 370
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 208/360 (57%), Gaps = 55/360 (15%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLM 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K+F ++D T+IC IL KGELQ++ KER SQ +QF+DIATIV +K IN ET+RP+T+SM
Sbjct: 75 KSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
+E + +IHF+V+ + NSK+QAL+VI L++ I+R+ MR+R+ V V++ L EKL
Sbjct: 135 VERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTVP--VQNFPSLLEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEER 391
+ SV +++ SG + +C ++PG +RE D VR+ QG LE+L + EG +
Sbjct: 193 KEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRS---IQGRLEILAVSVHAEG--DT 247
Query: 392 SSQIENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDK 450
S ++ D+A + + ET+ + T ++E K ++ N+KQ+ EE K
Sbjct: 248 SMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNTKQEGGEEKK 307
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL K+F ++D T+IC IL K
Sbjct: 61 NVSKGVLAKSKDLMKSFGSDDHTKICIDILEK 92
>gi|18401084|ref|NP_564488.1| sequence-specific DNA binding transcription factor [Arabidopsis
thaliana]
gi|7523664|gb|AAF63104.1|AC006423_5 Unknown protein [Arabidopsis thaliana]
gi|15450898|gb|AAK96720.1| Unknown protein [Arabidopsis thaliana]
gi|30725592|gb|AAP37818.1| At1g43860 [Arabidopsis thaliana]
gi|332193881|gb|AEE32002.1| sequence-specific DNA binding transcription factor [Arabidopsis
thaliana]
Length = 370
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 207/360 (57%), Gaps = 55/360 (15%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLM 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K+F ++D T+IC IL KGELQ++ KER SQ +QF+DIATIV +K IN ET+RP+T+SM
Sbjct: 75 KSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
+E + +IHF+V+ + NSK+QAL+VI L++ I+R+ MR+R+ V V++ L EKL
Sbjct: 135 VERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTVP--VQNFPSLLEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEER 391
+ SV +++ SG + +C ++PG +RE D VR+ QG LE+L + EG +
Sbjct: 193 KEWDGSVVSKDESGTQMSTVCEMEPGLFRECDSHVRS---IQGRLEILAVSVHAEG--DT 247
Query: 392 SSQIENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDK 450
S ++ D+A + + ET+ + T ++E K ++ N KQ+ EE K
Sbjct: 248 SMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIKQEGGEEKK 307
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL K+F ++D T+IC IL K
Sbjct: 61 NVSKGVLAKSKDLMKSFGSDDHTKICIDILEK 92
>gi|452820133|gb|EME27180.1| transcription factor isoform 1 [Galdieria sulphuraria]
Length = 249
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/290 (45%), Positives = 172/290 (59%), Gaps = 49/290 (16%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q+R+TNV +VR+KK GKRFEIACY+NKV+SWRN E
Sbjct: 5 PVTQVRLTNVVVVRLKKHGKRFEIACYRNKVLSWRNGTE--------------------- 43
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ VF+NVSKG ANK+DL +AF T D
Sbjct: 44 -------------------------KDLDEVLQVENVFSNVSKGVVANKKDLLEAFQTTD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+IC IL KGELQ+SDKER++ E+ +IATIV+ KCI+ ET RP TVS E +K
Sbjct: 79 IRKICVEILNKGELQVSDKERNTVYESLVHEIATIVANKCIDVETNRPLTVSRAEKEMKN 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
IHFSV K++KQQALEVI L++ I RA MR++++ A +K ++LK+++ C V
Sbjct: 139 IHFSVVPKKSAKQQALEVIRKLEEKGHIRRASMRIKIQ--APLKYAEELKQRMKNCIIHV 196
Query: 339 ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
E+EE G + LIDPG YREID +++ ET G E+L+L + EGE
Sbjct: 197 ESEERE-GNFRTVVLIDPGSYREIDNILKEETNRDGFFEVLSLAAIEEGE 245
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q+R+TNV +VR+KK GKRFEIACY+NKV+SWRN EKD+DEVLQ VF+NVSKG
Sbjct: 5 PVTQVRLTNVVVVRLKKHGKRFEIACYRNKVLSWRNGTEKDLDEVLQVENVFSNVSKGVV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANK+DL +AF T D +IC IL K
Sbjct: 65 ANKKDLLEAFQTTDIRKICVEILNK 89
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 50/72 (69%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+E+LN E+ ++ER++ E+ +IATIV+ KCI+ ET RP TVS E +K IHFSV
Sbjct: 84 VEILNKGELQVSDKERNTVYESLVHEIATIVANKCIDVETNRPLTVSRAEKEMKNIHFSV 143
Query: 436 NVNKNSKQQALE 447
K++KQQALE
Sbjct: 144 VPKKSAKQQALE 155
>gi|390345840|ref|XP_003726422.1| PREDICTED: ribosome maturation protein SBDS-like
[Strongylocentrotus purpuratus]
Length = 160
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/202 (57%), Positives = 133/202 (65%), Gaps = 46/202 (22%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVAIVRMKK GKRFEIACYKNKV+SWRN +E
Sbjct: 5 IFTPTNQIRLTNVAIVRMKKTGKRFEIACYKNKVMSWRNKVE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDIDEVLQTHTVF NVSKGQ A +EDL KAF
Sbjct: 47 ----------------------------KDIDEVLQTHTVFVNVSKGQGAKREDLVKAFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED TEICK IL KGELQ+SDKER+ Q+E+ F+DIATIV+EKC+N ETKRP+TV MIE
Sbjct: 79 TEDTTEICKQILAKGELQVSDKERNQQLESMFRDIATIVAEKCVNPETKRPYTVGMIERA 138
Query: 276 LKQIHFSVNVNKNSKQQALEVI 297
+K IHFSV N+ +KQQ V+
Sbjct: 139 MKDIHFSVKPNRGTKQQVCTVV 160
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 74/88 (84%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVAIVRMKK GKRFEIACYKNKV+SWRN +EKDIDEVLQTHTVF NVSK
Sbjct: 5 IFTPTNQIRLTNVAIVRMKKTGKRFEIACYKNKVMSWRNKVEKDIDEVLQTHTVFVNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A +EDL KAF TED TEICK IL K
Sbjct: 65 GQGAKREDLVKAFGTEDTTEICKQILAK 92
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 24/109 (22%)
Query: 360 REIDELVRTET------RGQGTL------------------ELLNLKEVTEGEEERSSQI 395
++IDE+++T T +GQG ++L E+ ++ER+ Q+
Sbjct: 47 KDIDEVLQTHTVFVNVSKGQGAKREDLVKAFGTEDTTEICKQILAKGELQVSDKERNQQL 106
Query: 396 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQ 444
E+ F+DIATIV+EKC+N ETKRP+TV MIE +K IHFSV N+ +KQQ
Sbjct: 107 ESMFRDIATIVAEKCVNPETKRPYTVGMIERAMKDIHFSVKPNRGTKQQ 155
>gi|68161096|gb|AAY86979.1| Shwachman-Bodian-Diamond syndrome protein [Ictalurus punctatus]
Length = 200
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 156/200 (78%), Gaps = 3/200 (1%)
Query: 190 LQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKD 249
LQT TVF NVSKGQ A K+DL KAF T+D TEICK IL KGELQ+SDKER SQ+E F+D
Sbjct: 1 LQTPTVFINVSKGQMAKKDDLSKAFGTDDLTEICKQILTKGELQVSDKERHSQLEQMFRD 60
Query: 250 IATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERA 309
IATIV+EKC+N ETKRP+TVS++E +K IH+SV K++KQQALEVI LK+ + I+RA
Sbjct: 61 IATIVAEKCVNPETKRPYTVSLMERAMKDIHYSVKATKSTKQQALEVIKQLKESIQIQRA 120
Query: 310 QMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE 369
MR+R + A KD K+LKEKL VE+E++ L ++CLIDPG +REIDEL+R E
Sbjct: 121 HMRLRFILPA--KDGKRLKEKLKPLLKVVESEDFD-DQLEMVCLIDPGCFREIDELIRCE 177
Query: 370 TRGQGTLELLNLKEVTEGEE 389
T+G+G++E+L+LK+V EGEE
Sbjct: 178 TKGKGSVEVLSLKDVEEGEE 197
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ ++ER SQ+E F+DIATIV+EKC+N ETKRP+TVS++E +K IH+SV
Sbjct: 36 QILTKGELQVSDKERHSQLEQMFRDIATIVAEKCVNPETKRPYTVSLMERAMKDIHYSVK 95
Query: 437 VNKNSKQQALE 447
K++KQQALE
Sbjct: 96 ATKSTKQQALE 106
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 31/40 (77%)
Query: 52 LQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
LQT TVF NVSKGQ A K+DL KAF T+D TEICK IL K
Sbjct: 1 LQTPTVFINVSKGQMAKKDDLSKAFGTDDLTEICKQILTK 40
>gi|297846792|ref|XP_002891277.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
gi|297337119|gb|EFH67536.1| transcription factor [Arabidopsis lyrata subsp. lyrata]
Length = 370
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/359 (40%), Positives = 200/359 (55%), Gaps = 53/359 (14%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLM 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF ++D T+IC IL KGELQ++ KER SQ +QF+DIATIV +K IN ET+RP+T+ M
Sbjct: 75 KAFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQKTINPETQRPYTIGM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
+E + +IHF+V+ + NSK+QAL+VI L++ I+R+ MR+R+ V V++ L EKL
Sbjct: 135 VERLMHEIHFAVDPHSNSKKQALDVIRELQKQFPIKRSPMRLRLTVP--VQNFPSLLEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEER 391
+ SV +++ SG + +C ++PG +RE D VR QG LE+L + EG+
Sbjct: 193 KEWEASVVSKDESGTQMSTVCEMEPGLFRECDSHVRN---MQGRLEILAVSVHAEGDTNM 249
Query: 392 SSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDK 450
E+ T +TETK T +IE K ++ KQ+ EE K
Sbjct: 250 DHYDEHDDMAFQTHKPLLPADTETKD-LTDPVIELSKKMQKQEISTADTIKQEGGEEKK 307
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL KAF ++D T+IC IL K
Sbjct: 61 NVSKGVLAKSKDLMKAFGSDDHTKICIDILEK 92
>gi|195171898|ref|XP_002026739.1| GL13275 [Drosophila persimilis]
gi|194111673|gb|EDW33716.1| GL13275 [Drosophila persimilis]
Length = 223
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/226 (52%), Positives = 146/226 (64%), Gaps = 46/226 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP++ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSVLDTQLNSIVNSVAALCVNPETRRPYSASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVS 318
E LK HFSV +NKN+KQ LE I L++ + IER++M++RV +
Sbjct: 135 EKSLKDAHFSVKMNKNTKQNTLEAIKMLREHLPIERSRMKLRVSFA 180
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP++ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSVLDTQLNSIVNSVAALCVNPETRRPYSASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+NKN+KQ LE
Sbjct: 147 MNKNTKQNTLE 157
>gi|25395651|pir||C88382 protein W06E11.4 [imported] - Caenorhabditis elegans
Length = 258
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 179/303 (59%), Gaps = 56/303 (18%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNK---------------- 44
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
EKDIDEVLQTHTVF+NVSKGQ + KE+L
Sbjct: 45 ------------------------------SEKDIDEVLQTHTVFSNVSKGQLSKKEELI 74
Query: 212 KAFNTEDQTEIC---KLILMKGELQISDKERSSQIENQF---KDIATIVSEKCINTETKR 265
AF EDQ EI + + G+ + S RS F K+++ +++ +N ETKR
Sbjct: 75 AAFGIEDQLEIYSRQRRLASVGK-RASGGFRSIAERGSFFLLKNVSQLIASMVVNPETKR 133
Query: 266 PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVK 325
P S+I+ L+++HFS+ N++SKQQAL+ IP L++ + IERA+M++RV + K+ K
Sbjct: 134 PVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAIPT--KEAK 191
Query: 326 KLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVT 385
+ KL + VE ++W G L ++ LI+PG +R +D+LVR ET+G G LE+L+LK+V
Sbjct: 192 SVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVV 251
Query: 386 EGE 388
EGE
Sbjct: 252 EGE 254
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I TPTNQ +TNVA+VRMKK GKRFEIACYKNKV++WRN EKDIDEVLQTHTVF+
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEI 84
NVSKGQ + KE+L AF EDQ EI
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEI 85
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 36/49 (73%)
Query: 399 FKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
K+++ +++ +N ETKRP S+I+ L+++HFS+ N++SKQQAL+
Sbjct: 115 LKNVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALD 163
>gi|440799503|gb|ELR20547.1| hypothetical protein ACA1_052360 [Acanthamoeba castellanii str.
Neff]
Length = 255
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/297 (43%), Positives = 172/297 (57%), Gaps = 50/297 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
KIFTP NQ+R TNVA+VR++++GKRFEIACYKNKVI WR I D
Sbjct: 3 GKIFTPVNQVRFTNVAVVRLQRSGKRFEIACYKNKVIEWRKKITTD-------------- 48
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
+DEVLQT T+FTNV KG A K +L KA
Sbjct: 49 --------------------------------LDEVLQTPTIFTNVGKGVIAKKAELSKA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
FNT DQ +I ++IL KGE+Q+S +ER Q++N FKDIA IV EKCIN ET RP TV M+E
Sbjct: 77 FNTTDQEKIIQMILDKGEIQVSTEERKLQLDNSFKDIAQIVVEKCINPETGRPLTVGMVE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
+K IH+SV K+ KQQAL+VI L K I RA MR+++ + G D+ K+K +L
Sbjct: 137 KAMKDIHYSVKAGKSPKQQALDVIRLLREKSDFPIARAPMRMKMILPEG--DLDKVKTEL 194
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+E E+ +G ++ LIDP +R ++E ++ +T G +E+L L +EGE
Sbjct: 195 KDEIQKIEREDKNGERREVVILIDPSNFRFVEETIKKQTNEAGAVEVLTLIVHSEGE 251
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 79/106 (74%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
KIFTP NQ+R TNVA+VR++++GKRFEIACYKNKVI WR I D+DEVLQT T+FTNV
Sbjct: 3 GKIFTPVNQVRFTNVAVVRLQRSGKRFEIACYKNKVIEWRKKITTDLDEVLQTPTIFTNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTN 107
KG A K +L KAFNT DQ +I ++IL K ++ T ++++ N
Sbjct: 63 GKGVIAKKAELSKAFNTTDQEKIIQMILDKGEIQVSTEERKLQLDN 108
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 48/70 (68%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ EER Q++N FKDIA IV EKCIN ET RP TV M+E +K IH+SV
Sbjct: 89 ILDKGEIQVSTEERKLQLDNSFKDIAQIVVEKCINPETGRPLTVGMVEKAMKDIHYSVKA 148
Query: 438 NKNSKQQALE 447
K+ KQQAL+
Sbjct: 149 GKSPKQQALD 158
>gi|168055787|ref|XP_001779905.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668718|gb|EDQ55320.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 123/290 (42%), Positives = 176/290 (60%), Gaps = 51/290 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q R+TNVAIVR++K G RFEIAC+KNKV+SWR+++E
Sbjct: 8 PIGQKRLTNVAIVRVRKHGLRFEIACFKNKVLSWRSHVE--------------------- 46
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KDIDEVLQTHTVF+NVSKG A +DL + F T+D
Sbjct: 47 -------------------------KDIDEVLQTHTVFSNVSKGVLAKSKDLIQVFGTDD 81
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+ ++C IL KGELQ++D+ER SQ+ NQF+DIATIV K +N +T+RP+T++MIE +++
Sbjct: 82 EDKVCLEILEKGELQVADRERESQLSNQFRDIATIVMAKTVNPDTERPYTITMIERLMRE 141
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
+HF+++ ++NSKQQALE+I L++ I RA+M++R V + ++ L L +
Sbjct: 142 VHFAIDPHRNSKQQALELIRELQKKYPITRARMKLRFVVP--INQIESLTTALSSWNAQI 199
Query: 339 ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
E +E + L+C IDPG +RE D LVR QGTLE++++ EGE
Sbjct: 200 EGKEETTTNTSLVCKIDPGHFRECDTLVR---ELQGTLEVVSMAVQGEGE 246
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 8/115 (6%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q R+TNVAIVR++K G RFEIAC+KNKV+SWR+++EKDIDEVLQTHTVF+NVSKG
Sbjct: 8 PIGQKRLTNVAIVRVRKHGLRFEIACFKNKVLSWRSHVEKDIDEVLQTHTVFSNVSKGVL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK------DMSKIFTPTNQIRMTNVAIVRMKK 115
A +DL + F T+D+ ++C IL K D + +NQ R ++A + M K
Sbjct: 68 AKSKDLIQVFGTDDEDKVCLEILEKGELQVADRERESQLSNQFR--DIATIVMAK 120
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 65/91 (71%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +++ ++ T+ + LE+L E+ + ER SQ+ NQF+DIATIV K +N +T+
Sbjct: 68 AKSKDLIQVFGTDDEDKVCLEILEKGELQVADRERESQLSNQFRDIATIVMAKTVNPDTE 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+T++MIE ++++HF+++ ++NSKQQALE
Sbjct: 128 RPYTITMIERLMREVHFAIDPHRNSKQQALE 158
>gi|430811843|emb|CCJ30699.1| unnamed protein product [Pneumocystis jirovecii]
Length = 265
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 175/296 (59%), Gaps = 51/296 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+N I++TNV++VR+KK GKRFE+ACYKNK++ WR+ +E
Sbjct: 1 MVVINQPSNLIKLTNVSVVRLKKGGKRFEVACYKNKILEWRSGVET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DIDEVLQ VFTNVSKG+ A EDLK+
Sbjct: 47 --------------------------------DIDEVLQISNVFTNVSKGKVACMEDLKR 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F T D I + IL KG++Q+ +KERS QIEN +KDI + + C+N TK+ +T SMI
Sbjct: 75 VFQTSDMNVILQEILKKGDIQVGEKERSHQIENTYKDIVRTIVDMCVNPTTKKAYTASMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQ--CMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E LK + FSVN+NKN K QAL+VI LK+ + IERA+MRVR+ + ++KLKEK
Sbjct: 135 EKALKDLGFSVNLNKNVKSQALDVIKHLKEKNIIPIERARMRVRIVSPLSI--IQKLKEK 192
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
L + + ++ +EEW+ I IDPG Y+ I + +R E++ +G +E+L+LKE+ E
Sbjct: 193 LEQLSINITDEEWN-DEFQAIAYIDPGDYKRIIDFIRQESKDKGYIEVLDLKEIIE 247
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 67/91 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+N I++TNV++VR+KK GKRFE+ACYKNK++ WR+ +E DIDEVLQ VFTN
Sbjct: 1 MVVINQPSNLIKLTNVSVVRLKKGGKRFEVACYKNKILEWRSGVETDIDEVLQISNVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A EDLK+ F T D I + IL K
Sbjct: 61 VSKGKVACMEDLKRVFQTSDMNVILQEILKK 91
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L ++ GE+ERS QIEN +KDI + + C+N TK+ +T SMIE LK + FSVN
Sbjct: 87 EILKKGDIQVGEKERSHQIENTYKDIVRTIVDMCVNPTTKKAYTASMIEKALKDLGFSVN 146
Query: 437 VNKNSKQQALE 447
+NKN K QAL+
Sbjct: 147 LNKNVKSQALD 157
>gi|225457809|ref|XP_002266110.1| PREDICTED: ribosome maturation protein SBDS [Vitis vinifera]
gi|302142747|emb|CBI19950.3| unnamed protein product [Vitis vinifera]
Length = 358
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 177/297 (59%), Gaps = 51/297 (17%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS++ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKD+DEVLQ+H V++
Sbjct: 1 MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKG A +DL+ AF
Sbjct: 61 NVSKGVLAKSKDLEAAFGKE---------------------------------------- 80
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
DQTEI IL KGELQ++ KER SQ+ +QF+DIATIV +K IN ET+RP+T SM
Sbjct: 81 -----RDQTEILLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTSSM 135
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +IHFSV+ N +SK+QALEVI L++ I+R MR+R+ V ++ L EKL
Sbjct: 136 IERLMHEIHFSVDPNSSSKKQALEVIRELQKHFPIKRCPMRLRLTVPQ--QNFSSLLEKL 193
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
S+ +++ SGG L +IC ++PG +R+ D LVR QG LE+L + EG+
Sbjct: 194 NVWNASIVSKDESGGQLSIICEMEPGIFRDCDALVRNL---QGRLEILAVSLHMEGD 247
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/93 (61%), Positives = 71/93 (76%), Gaps = 2/93 (2%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS++ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKD+DEVLQ+H V++
Sbjct: 1 MSRVVQQPIGQKRLTNVAVVRLKKKGIRFEIACYKNKVLSWRSGVEKDLDEVLQSHIVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTE-DQTEICKLILMK 91
NVSKG A +DL+ AF E DQTEI IL K
Sbjct: 61 NVSKGVLAKSKDLEAAFGKERDQTEILLEILDK 93
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 55/72 (76%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L+ E+ +ER SQ+ +QF+DIATIV +K IN ET+RP+T SMIE + +IHFSV
Sbjct: 88 LEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTSSMIERLMHEIHFSV 147
Query: 436 NVNKNSKQQALE 447
+ N +SK+QALE
Sbjct: 148 DPNSSSKKQALE 159
>gi|224066757|ref|XP_002302200.1| predicted protein [Populus trichocarpa]
gi|222843926|gb|EEE81473.1| predicted protein [Populus trichocarpa]
Length = 356
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 190/324 (58%), Gaps = 57/324 (17%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
K+ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 4 KLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVE----------------- 46
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KD+DEVLQ+HTV++NVSKG A DL KAF
Sbjct: 47 -----------------------------KDLDEVLQSHTVYSNVSKGVLAKNSDLVKAF 77
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+D T+IC IL KGELQ++ KER SQ+ +QF+DIATIV +K IN ET+RP+T+SM+E
Sbjct: 78 GHDDHTKICLEILEKGELQVAGKERDSQLSSQFRDIATIVMQKTINPETQRPYTISMVER 137
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
+ +IHF+V+ + +SK+QAL+VI L++ I+R+ MR+R+ V + L EKL
Sbjct: 138 LMHEIHFAVDPHSSSKKQALDVIRELQKHFPIKRSPMRLRLAVIG--QKFPNLLEKLNAW 195
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQ 394
+V +++ SG +IC +DPG +R+ D LVR QG +E+L + EG+ +
Sbjct: 196 DANVVSKDESGSHQSVICEMDPGFFRDCDALVRN---LQGRMEILAVSVHFEGD----TH 248
Query: 395 IE--NQFKDIATIVSEKCINTETK 416
++ + ++D+ + ++ ++E +
Sbjct: 249 VDDFDDYEDVPPALPKESADSEVQ 272
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 69/89 (77%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
K+ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKD+DEVLQ+HTV++NVS
Sbjct: 4 KLLQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYSNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KG A DL KAF +D T+IC IL K
Sbjct: 64 KGVLAKNSDLVKAFGHDDHTKICLEILEK 92
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 55/72 (76%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +ER SQ+ +QF+DIATIV +K IN ET+RP+T+SM+E + +IHF+V
Sbjct: 87 LEILEKGELQVAGKERDSQLSSQFRDIATIVMQKTINPETQRPYTISMVERLMHEIHFAV 146
Query: 436 NVNKNSKQQALE 447
+ + +SK+QAL+
Sbjct: 147 DPHSSSKKQALD 158
>gi|384253127|gb|EIE26602.1| Shwachman-Bodian-diamond syndrome, partial [Coccomyxa
subellipsoidea C-169]
Length = 249
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 113/290 (38%), Positives = 172/290 (59%), Gaps = 50/290 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q R+TNVA+VR+KK G RFE+ACYKNKV++WRN +E
Sbjct: 8 PIGQKRLTNVAVVRLKKKGIRFEVACYKNKVVNWRNEVE--------------------- 46
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQT T+F NVSKG A +EDL F T+D
Sbjct: 47 -------------------------KDLDEVLQTTTIFNNVSKGILAKREDLVDVFGTDD 81
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+ +IC IL +G++Q+SDKER ++ + FKD+A+I++EKC+N T+RP+T+SMIE LK
Sbjct: 82 EEKICVRILAEGDMQVSDKERDVELSSMFKDVASIIAEKCVNPNTQRPYTISMIERALKD 141
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
+HFSV+ + +KQQAL + LK+ + IERA+MR+R+++ ++ L + L ++
Sbjct: 142 VHFSVDPKRGAKQQALHALQQLKEKLPIERARMRLRLQIPVTCRN--DLMQLLASQQATI 199
Query: 339 ENEEWS--GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
E+E+ + L + CL+DPG +R + V++ G+G +E+++L E
Sbjct: 200 ESEDLALHNSQLTVTCLVDPGAFRSLHTFVQSSCDGEGRMEVVSLAATEE 249
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 65/83 (78%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q R+TNVA+VR+KK G RFE+ACYKNKV++WRN +EKD+DEVLQT T+F NVSKG
Sbjct: 8 PIGQKRLTNVAVVRLKKKGIRFEVACYKNKVVNWRNEVEKDLDEVLQTTTIFNNVSKGIL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLIL 89
A +EDL F T+D+ +IC IL
Sbjct: 68 AKREDLVDVFGTDDEEKICVRIL 90
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 47/61 (77%)
Query: 387 GEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQAL 446
++ER ++ + FKD+A+I++EKC+N T+RP+T+SMIE LK +HFSV+ + +KQQAL
Sbjct: 98 SDKERDVELSSMFKDVASIIAEKCVNPNTQRPYTISMIERALKDVHFSVDPKRGAKQQAL 157
Query: 447 E 447
Sbjct: 158 H 158
>gi|195337997|ref|XP_002035612.1| GM14796 [Drosophila sechellia]
gi|194128705|gb|EDW50748.1| GM14796 [Drosophila sechellia]
Length = 177
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/221 (52%), Positives = 140/221 (63%), Gaps = 46/221 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSN----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEVLQTHTVFTNVSKGQAA K++L+K
Sbjct: 44 -----------------------------SEKDIDEVLQTHTVFTNVSKGQAAKKDELQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFN D+TEICK IL KGELQ+S+KER S ++ Q I V+ C+N ET+RP+ S+I
Sbjct: 75 AFNKTDETEICKEILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRV 313
E LK HFSV +N+N+KQ LE I LK M IER++M+
Sbjct: 135 EKSLKDAHFSVKMNRNTKQNTLEAIKILKDHMPIERSRMKA 175
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 84/91 (92%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KK GKRFEIACYKNKV+SWR+N EKDIDEVLQTHTVFTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDEVLQTHTVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAFN D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFNKTDETEICKEILSK 91
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER S ++ Q I V+ C+N ET+RP+ S+IE LK HFSV
Sbjct: 87 EILSKGELQVSEKERQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVK 146
Query: 437 VNKNSKQQALE 447
+N+N+KQ LE
Sbjct: 147 MNRNTKQNTLE 157
>gi|328855848|gb|EGG04972.1| hypothetical protein MELLADRAFT_108031 [Melampsora larici-populina
98AG31]
Length = 255
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/301 (44%), Positives = 186/301 (61%), Gaps = 55/301 (18%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P+NQI++TNV+IVR+KK GKRFEIACYKNK WR IE
Sbjct: 3 VFQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKAREWRTGIET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+ EVLQT T+F+NVSKGQ A+ DLK +F
Sbjct: 46 -----------------------------DLSEVLQTDTIFSNVSKGQVASAADLKHSFG 76
Query: 216 TEDQTEICKL-ILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+ ++ L IL KGELQ+SDKER +++ + K+IA +V+EKC++ T RP T+SMIE
Sbjct: 77 SGTNNDVIVLEILQKGELQVSDKERGQELDVKKKEIAHLVAEKCLDPSTHRPHTLSMIEK 136
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTL---KQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
++ +HFSVN +K+SK QALE+I TL +S+ERAQMRVR+ + A KD KKLK ++
Sbjct: 137 AMEAVHFSVNFSKSSKIQALELIKTLSARPDIISLERAQMRVRLTMPA--KDGKKLKSQI 194
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET-RGQGTLELLN-LKEVTEGEE 389
V +T VE+EEWS + LIDPG++R I+E+++ E+ G+G LE L+ L EV EG+E
Sbjct: 195 VPLSTKVEDEEWS-DEWEWVALIDPGQFRVINEILQQESLGGRGKLETLSFLAEVVEGDE 253
Query: 390 E 390
+
Sbjct: 254 Q 254
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P+NQI++TNV+IVR+KK GKRFEIACYKNK WR IE D+ EVLQT T+F+NVSK
Sbjct: 3 VFQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKAREWRTGIETDLSEVLQTDTIFSNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A+ DLK +F + ++ L +++
Sbjct: 63 GQVASAADLKHSFGSGTNNDVIVLEILQ 90
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 6/86 (6%)
Query: 372 GQGT------LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G GT LE+L E+ ++ER +++ + K+IA +V+EKC++ T RP T+SMIE
Sbjct: 76 GSGTNNDVIVLEILQKGELQVSDKERGQELDVKKKEIAHLVAEKCLDPSTHRPHTLSMIE 135
Query: 426 AGLKQIHFSVNVNKNSKQQALEEDKT 451
++ +HFSVN +K+SK QALE KT
Sbjct: 136 KAMEAVHFSVNFSKSSKIQALELIKT 161
>gi|116781518|gb|ABK22134.1| unknown [Picea sitchensis]
Length = 380
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/315 (41%), Positives = 186/315 (59%), Gaps = 61/315 (19%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MSK I P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSKLILQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVET------------- 47
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
D+DEVLQ+HTV++NVSKG A +DL
Sbjct: 48 ---------------------------------DLDEVLQSHTVYSNVSKGILAKSKDLI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K+F T+DQ +IC +L KGELQI+ KER SQ+ +QF+DIATIV EK IN ET RP+T++M
Sbjct: 75 KSFGTDDQEKICSEVLNKGELQIAGKERESQLSSQFRDIATIVMEKTINPETDRPYTINM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + ++HF+V+ +K SKQQAL++I L++ I+R+ MR+R+ + +++ L +KL
Sbjct: 135 IERLMHEVHFAVDPHKISKQQALDLIRELQKHFPIKRSPMRLRLIIPE-IQEANFL-QKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLK--------- 382
+ ++E SG L ++C I+PG +R+ D LVR +G LE+L++
Sbjct: 193 QTWNPCIVSKEVSGNQLSMVCQIEPGYFRDCDGLVRD---CKGRLEILSVPVHKEEDVRV 249
Query: 383 EVTEGEEERSSQIEN 397
EV +GEE + + N
Sbjct: 250 EVDDGEEALTGNLHN 264
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MSK I P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E D+DEVLQ+HTV++
Sbjct: 1 MSKLILQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVETDLDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL K+F T+DQ +IC +L K
Sbjct: 61 NVSKGILAKSKDLIKSFGTDDQEKICSEVLNK 92
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ +ER SQ+ +QF+DIATIV EK IN ET RP+T++MIE + ++HF+V+
Sbjct: 88 EVLNKGELQIAGKERESQLSSQFRDIATIVMEKTINPETDRPYTINMIERLMHEVHFAVD 147
Query: 437 VNKNSKQQALE 447
+K SKQQAL+
Sbjct: 148 PHKISKQQALD 158
>gi|343426686|emb|CBQ70215.1| probable Shwachman-Bodian-Diamond syndrome protein [Sporisorium
reilianum SRZ2]
Length = 254
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/295 (42%), Positives = 179/295 (60%), Gaps = 51/295 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQI++TNV+IVR++KAGKRFEIACYKNKV WR +E
Sbjct: 3 VFQPANQIKLTNVSIVRLRKAGKRFEIACYKNKVREWRTGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEV+Q VF NVSKGQ A +DL+KAF
Sbjct: 46 -----------------------------DLDEVVQIENVFVNVSKGQVAPSDDLQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + +I + IL KGELQ+ DKER ++EN ++DIAT V++KC++ +++RP+TV MIE
Sbjct: 77 TTEIPKILQEILKKGELQVGDKERQHELENTWRDIATQVADKCVDPQSQRPYTVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +H+SV +++KQQAL+VI L KQ + I+RA+MR+R+ + KD KKLK+KL+
Sbjct: 137 MHDVHYSVKTGRSAKQQALDVIRLLQEKQTIPIQRARMRIRITMPN--KDGKKLKDKLLP 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
VE+E+WS LI IDPG + I+EL++ + +G+G +E LN + EG+
Sbjct: 195 LTDKVEDEDWS-DEWELIAFIDPGALKSINELIQNDIKGRGNVETLNFTTIREGD 248
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQI++TNV+IVR++KAGKRFEIACYKNKV WR +E D+DEV+Q VF NVSK
Sbjct: 3 VFQPANQIKLTNVSIVRLRKAGKRFEIACYKNKVREWRTGVETDLDEVVQIENVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A +DL+KAF T + +I + IL K
Sbjct: 63 GQVAPSDDLQKAFGTTEIPKILQEILKK 90
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 53/71 (74%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ G++ER ++EN ++DIAT V++KC++ +++RP+TV MIE + +H+SV
Sbjct: 86 EILKKGELQVGDKERQHELENTWRDIATQVADKCVDPQSQRPYTVGMIEKAMHDVHYSVK 145
Query: 437 VNKNSKQQALE 447
+++KQQAL+
Sbjct: 146 TGRSAKQQALD 156
>gi|213409634|ref|XP_002175587.1| UPF0023 protein [Schizosaccharomyces japonicus yFS275]
gi|212003634|gb|EEB09294.1| UPF0023 protein [Schizosaccharomyces japonicus yFS275]
Length = 240
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 170/288 (59%), Gaps = 59/288 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QIR+TNV+IV+MK+ GKRFEIACYKNKV+ WRN IE
Sbjct: 6 PSGQIRLTNVSIVKMKRGGKRFEIACYKNKVMEWRNKIET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+DEVLQ H+VFTNVSKG A K+DLKKAF T++
Sbjct: 46 --------------------------DLDEVLQIHSVFTNVSKGLVAGKQDLKKAFGTDN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
Q EI IL KG+LQ+ +KER+ Q+ + F+DI + ++ C+N TK P+ ++IE L
Sbjct: 80 QDEIILEILKKGDLQVGEKERNYQLSSMFRDIVSHIASMCMNPNTKLPYPSTIIEKALTD 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQ--CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
FSV+ +KN+K QALE I L+Q + IERA+MRV + S VK+ K L+++L A
Sbjct: 140 SGFSVSTSKNAKSQALEAIKMLQQKNVLPIERARMRVSIVTS--VKEGKALRDRLKAMAD 197
Query: 337 SVENE----EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
VE E E+ L+ ++ PG Y+ I+EL+R ET+G+G +++L+
Sbjct: 198 EVEEENIDDEYE-----LVVVVQPGAYKTIEELIRNETKGRGMVQVLH 240
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QIR+TNV+IV+MK+ GKRFEIACYKNKV+ WRN IE D+DEVLQ H+VFTNVSKG
Sbjct: 6 PSGQIRLTNVSIVKMKRGGKRFEIACYKNKVMEWRNKIETDLDEVLQIHSVFTNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A K+DLKKAF T++Q EI IL K
Sbjct: 66 AGKQDLKKAFGTDNQDEIILEILKK 90
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%)
Query: 368 TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
T+ + + LE+L ++ GE+ER+ Q+ + F+DI + ++ C+N TK P+ ++IE
Sbjct: 77 TDNQDEIILEILKKGDLQVGEKERNYQLSSMFRDIVSHIASMCMNPNTKLPYPSTIIEKA 136
Query: 428 LKQIHFSVNVNKNSKQQALE 447
L FSV+ +KN+K QALE
Sbjct: 137 LTDSGFSVSTSKNAKSQALE 156
>gi|302816177|ref|XP_002989768.1| hypothetical protein SELMODRAFT_130273 [Selaginella moellendorffii]
gi|300142545|gb|EFJ09245.1| hypothetical protein SELMODRAFT_130273 [Selaginella moellendorffii]
Length = 356
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 166/276 (60%), Gaps = 49/276 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK GKRFEIACYKNKV+SWR+ +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLKKHGKRFEIACYKNKVLSWRSRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQTHTV+ NVSKG A ++L
Sbjct: 47 --------------------------------KDIDEVLQTHTVYCNVSKGILAKSKELV 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
+AF T D+ +IC IL KGELQ++ KER Q+ +QF+DIA IV +K +N ET+RPFT+SM
Sbjct: 75 EAFGTADEEKICLEILEKGELQVAGKEREVQLSSQFRDIAGIVMDKTLNPETERPFTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE ++++HF+V+ N++SK+QALE+I L+ I RA MR+++ VS K +KL E L
Sbjct: 135 IERFMREVHFAVDPNRSSKKQALELIRELQSHFPITRALMRLKLSVS--TKHREKLLEGL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVR 367
+E+ + + +++C ++PG +R D L+R
Sbjct: 193 ADFQAKMESRDEADEAFIVVCRVEPGHFRACDALIR 228
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK GKRFEIACYKNKV+SWR+ +EKDIDEVLQTHTV+
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLKKHGKRFEIACYKNKVLSWRSRVEKDIDEVLQTHTVYC 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A ++L +AF T D+ +IC IL K
Sbjct: 61 NVSKGILAKSKELVEAFGTADEEKICLEILEK 92
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 62/91 (68%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +E+ E T + LE+L E+ +ER Q+ +QF+DIA IV +K +N ET+
Sbjct: 68 AKSKELVEAFGTADEEKICLEILEKGELQVAGKEREVQLSSQFRDIAGIVMDKTLNPETE 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RPFT+SMIE ++++HF+V+ N++SK+QALE
Sbjct: 128 RPFTISMIERFMREVHFAVDPNRSSKKQALE 158
>gi|71022703|ref|XP_761581.1| hypothetical protein UM05434.1 [Ustilago maydis 521]
gi|46101259|gb|EAK86492.1| hypothetical protein UM05434.1 [Ustilago maydis 521]
Length = 254
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 179/295 (60%), Gaps = 51/295 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQI++TNV+IVR++KAGKRFEIACYKNKV WR+ +E
Sbjct: 3 VFQPANQIKLTNVSIVRLRKAGKRFEIACYKNKVREWRSGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEV+Q VF NVSKGQ A +DL+KAF
Sbjct: 46 -----------------------------DLDEVVQIENVFVNVSKGQVAPSDDLQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + +I + IL KGELQ+ +KER ++ N +KDIAT V+EKC++ ++RP+TV MIE
Sbjct: 77 TTEIPKILQEILKKGELQVGEKERQHELTNTWKDIATQVAEKCVDPSSQRPYTVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +H+SV +++KQQAL+VI L K+ + IERA+MR+R+ + KD KK+K+K++
Sbjct: 137 MHDVHYSVKTARSAKQQALDVIRLLQEKKTIPIERARMRIRITMPN--KDGKKIKDKILP 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
V++E+WS LI IDPG + I+EL+++E +G+G +E LN + EG+
Sbjct: 195 LTDKVDDEDWS-DQWELIASIDPGALKTINELIQSEIKGRGNVETLNFTTIHEGD 248
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 74/104 (71%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQI++TNV+IVR++KAGKRFEIACYKNKV WR+ +E D+DEV+Q VF NVSK
Sbjct: 3 VFQPANQIKLTNVSIVRLRKAGKRFEIACYKNKVREWRSGVETDLDEVVQIENVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTN 107
GQ A +DL+KAF T + +I + IL K ++ Q +TN
Sbjct: 63 GQVAPSDDLQKAFGTTEIPKILQEILKKGELQVGEKERQHELTN 106
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER ++ N +KDIAT V+EKC++ ++RP+TV MIE + +H+SV
Sbjct: 86 EILKKGELQVGEKERQHELTNTWKDIATQVAEKCVDPSSQRPYTVGMIEKAMHDVHYSVK 145
Query: 437 VNKNSKQQALE 447
+++KQQAL+
Sbjct: 146 TARSAKQQALD 156
>gi|302850249|ref|XP_002956652.1| hypothetical protein VOLCADRAFT_83724 [Volvox carteri f.
nagariensis]
gi|300258013|gb|EFJ42254.1| hypothetical protein VOLCADRAFT_83724 [Volvox carteri f.
nagariensis]
Length = 301
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 177/305 (58%), Gaps = 58/305 (19%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS++F P Q R+TN+A+VR+KK G+RFEIACYKNKV WR+ IE
Sbjct: 1 MSRVFQPVGQKRLTNIAVVRLKKNGERFEIACYKNKVGDWRSGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQT T+F NV KG A ++L
Sbjct: 46 -------------------------------KDLDEVLQTTTIFHNVGKGVVAKDKELMA 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T DQ IC IL KGELQ+SDKER + E+ FKD+A ++ EKCIN T RP+T+SM+
Sbjct: 75 AFGTSDQKAICLEILAKGELQVSDKERKLEYEHLFKDVAGVLVEKCINPATNRPYTLSML 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
E L+ IHF+V+ K++KQQALE +P L++ IERA+MR+++ V G + ++L++ L
Sbjct: 135 ERALRDIHFNVDPKKSAKQQALEALPLLQKEFPIERARMRLKLSVPVGSQ--QELEQLLQ 192
Query: 333 KCATSVENEEWSGGGLLLIC----LIDPGKYREIDELVRTE----TRG--QGTLELLNLK 382
+ A V++ + GG +C L++PG +R + ++ + +RG G LE+L+L
Sbjct: 193 REAAEVQSLDVGGGAAGGVCTAVALVEPGSFRNLHNFIQQQSAASSRGGVGGRLEVLSLA 252
Query: 383 EVTEG 387
+ EG
Sbjct: 253 VMAEG 257
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 67/91 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS++F P Q R+TN+A+VR+KK G+RFEIACYKNKV WR+ IEKD+DEVLQT T+F N
Sbjct: 1 MSRVFQPVGQKRLTNIAVVRLKKNGERFEIACYKNKVGDWRSGIEKDLDEVLQTTTIFHN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
V KG A ++L AF T DQ IC IL K
Sbjct: 61 VGKGVVAKDKELMAAFGTSDQKAICLEILAK 91
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ ++ER + E+ FKD+A ++ EKCIN T RP+T+SM+E L+ IHF+V
Sbjct: 86 LEILAKGELQVSDKERKLEYEHLFKDVAGVLVEKCINPATNRPYTLSMLERALRDIHFNV 145
Query: 436 NVNKNSKQQALE 447
+ K++KQQALE
Sbjct: 146 DPKKSAKQQALE 157
>gi|224082388|ref|XP_002306675.1| predicted protein [Populus trichocarpa]
gi|222856124|gb|EEE93671.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/286 (43%), Positives = 170/286 (59%), Gaps = 52/286 (18%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
K+ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E
Sbjct: 4 KLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVE----------------- 46
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTH-TVFTNVSKGQAANKEDLKKA 213
KD+DEVLQ+H TV++NVSKG A DL KA
Sbjct: 47 -----------------------------KDLDEVLQSHHTVYSNVSKGILAKSLDLNKA 77
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F +DQT IC IL KGELQ++ KER SQ+ +QF+DIATIV +K IN ET+RP+T+SMIE
Sbjct: 78 FGHDDQTRICLEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTISMIE 137
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + HF+V + +SK+QAL+VI L++ I+R+ MR+ + VS ++ L EKL
Sbjct: 138 RLMHETHFAVEPHNSSKKQALDVIRELQKHFPIKRSPMRLGLTVSG--QNFSTLLEKLGA 195
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
+V +++ SG +IC +DPG +R+ D LVR QG LE+L
Sbjct: 196 WDANVVSKDESGSRQSIICEMDPGFFRDCDTLVRNL---QGRLEIL 238
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 69/90 (76%), Gaps = 1/90 (1%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQT-HTVFTNV 61
K+ P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +EKD+DEVLQ+ HTV++NV
Sbjct: 4 KLQQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSGVEKDLDEVLQSHHTVYSNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKG A DL KAF +DQT IC IL K
Sbjct: 64 SKGILAKSLDLNKAFGHDDQTRICLEILDK 93
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 54/72 (75%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L+ E+ +ER SQ+ +QF+DIATIV +K IN ET+RP+T+SMIE + + HF+V
Sbjct: 88 LEILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTISMIERLMHETHFAV 147
Query: 436 NVNKNSKQQALE 447
+ +SK+QAL+
Sbjct: 148 EPHNSSKKQALD 159
>gi|302820124|ref|XP_002991730.1| hypothetical protein SELMODRAFT_161876 [Selaginella moellendorffii]
gi|300140411|gb|EFJ07134.1| hypothetical protein SELMODRAFT_161876 [Selaginella moellendorffii]
Length = 356
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 166/276 (60%), Gaps = 49/276 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK G+RFEIACYKNKV+SWR+ +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLKKHGRRFEIACYKNKVLSWRSRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQTHTV+ NVSKG A ++L
Sbjct: 47 --------------------------------KDIDEVLQTHTVYCNVSKGILAKSKELV 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
+AF T D+ +IC IL KGELQ++ KER Q+ +QF+DIA IV +K +N ET+RPFT+SM
Sbjct: 75 EAFGTADEEKICLEILEKGELQVAGKEREVQLSSQFRDIAGIVMDKTLNPETERPFTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE ++++HF+V+ N++SK+QALE+I L+ I RA MR+++ VS K +KL E L
Sbjct: 135 IERFMREVHFAVDPNRSSKKQALELIRELQSHFPITRALMRLKLSVS--TKHREKLLEGL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVR 367
+E+ + + +++C ++PG +R D L+R
Sbjct: 193 ADFQAKMESRDEADEAFIVVCRVEPGHFRACDALIR 228
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK G+RFEIACYKNKV+SWR+ +EKDIDEVLQTHTV+
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLKKHGRRFEIACYKNKVLSWRSRVEKDIDEVLQTHTVYC 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A ++L +AF T D+ +IC IL K
Sbjct: 61 NVSKGILAKSKELVEAFGTADEEKICLEILEK 92
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 62/91 (68%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +E+ E T + LE+L E+ +ER Q+ +QF+DIA IV +K +N ET+
Sbjct: 68 AKSKELVEAFGTADEEKICLEILEKGELQVAGKEREVQLSSQFRDIAGIVMDKTLNPETE 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RPFT+SMIE ++++HF+V+ N++SK+QALE
Sbjct: 128 RPFTISMIERFMREVHFAVDPNRSSKKQALE 158
>gi|159462502|ref|XP_001689481.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283469|gb|EDP09219.1| predicted protein [Chlamydomonas reinhardtii]
Length = 239
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 172/287 (59%), Gaps = 49/287 (17%)
Query: 102 QIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANK 161
Q R+TN+A+VR+KK G+RFEIACYKNKV WR+ IE
Sbjct: 1 QKRLTNIAVVRLKKNGERFEIACYKNKVGDWRSGIE------------------------ 36
Query: 162 EDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTE 221
KD+DEVLQT T+F NV KG A ++L+ AF T DQ
Sbjct: 37 ----------------------KDLDEVLQTTTIFHNVGKGVVAKDKELQAAFGTTDQHA 74
Query: 222 ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF 281
IC IL KGELQ+ ++ER + E+ FKD+A ++ EKC+N T RP+T+SM+E L+ IHF
Sbjct: 75 ICLEILAKGELQVGERERKQEYEHLFKDVAGVLVEKCVNPNTNRPYTLSMLERALRDIHF 134
Query: 282 SVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENE 341
+++ K++KQQALE +P L++ IERA+MR+R+ V V+ ++L++ L + A V
Sbjct: 135 NLDPKKSAKQQALEALPLLQKEFPIERARMRLRLTVP--VEAQQELEQLLQREAADVAGL 192
Query: 342 EWSGGGL-LLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
+ + GG+ +++ ++PG +R+++ ++T RG G LE+L+L + EG
Sbjct: 193 DVAAGGMCVVVAQVEPGVFRDLNNFMQTTARGAGRLEVLSLAVMAEG 239
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%)
Query: 10 QIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
Q R+TN+A+VR+KK G+RFEIACYKNKV WR+ IEKD+DEVLQT T+F NV KG A
Sbjct: 1 QKRLTNIAVVRLKKNGERFEIACYKNKVGDWRSGIEKDLDEVLQTTTIFHNVGKGVVAKD 60
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
++L+ AF T DQ IC IL K
Sbjct: 61 KELQAAFGTTDQHAICLEILAK 82
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ GE ER + E+ FKD+A ++ EKC+N T RP+T+SM+E L+ IHF++
Sbjct: 77 LEILAKGELQVGERERKQEYEHLFKDVAGVLVEKCVNPNTNRPYTLSMLERALRDIHFNL 136
Query: 436 NVNKNSKQQALE 447
+ K++KQQALE
Sbjct: 137 DPKKSAKQQALE 148
>gi|388582735|gb|EIM23039.1| Shwachman-Bodian-diamond syndrome protein [Wallemia sebi CBS
633.66]
Length = 240
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 160/272 (58%), Gaps = 51/272 (18%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KKAGKRFEIACYKNKV WRN
Sbjct: 3 INQPSNQIKLTNVSVVRLKKAGKRFEIACYKNKVGEWRNG-------------------- 42
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
E DID V+Q +VFTNVSKG N ++L+KAF
Sbjct: 43 --------------------------SETDIDNVVQISSVFTNVSKGAVCNNDELQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D EI K IL KGELQ+ +KER + N++++IATIV+E+C++ T RP TVSMIE
Sbjct: 77 TSDNDEIIKQILKKGELQVGEKERGHDLSNKWREIATIVAERCVDPATGRPVTVSMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +H+SVN NKN+K Q+ EVI + K + + RAQMRVR ++A KD K +KE++ +
Sbjct: 137 MHDVHYSVNANKNAKSQSGEVIKQIQEKGVLPLARAQMRVR--ITAASKDGKNVKERIKE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
E+E+WS ICLIDP ++ +++L
Sbjct: 195 YVNKAEDEDWS-DEWEYICLIDPSSFKALNDL 225
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KKAGKRFEIACYKNKV WRN E DID V+Q +VFTNVSK
Sbjct: 3 INQPSNQIKLTNVSVVRLKKAGKRFEIACYKNKVGEWRNGSETDIDNVVQISSVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G N ++L+KAF T D EI K IL K
Sbjct: 63 GAVCNNDELQKAFGTSDNDEIIKQILKK 90
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 51/71 (71%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L E+ GE+ER + N++++IATIV+E+C++ T RP TVSMIE + +H+SVN
Sbjct: 86 QILKKGELQVGEKERGHDLSNKWREIATIVAERCVDPATGRPVTVSMIEKAMHDVHYSVN 145
Query: 437 VNKNSKQQALE 447
NKN+K Q+ E
Sbjct: 146 ANKNAKSQSGE 156
>gi|449458091|ref|XP_004146781.1| PREDICTED: ribosome maturation protein SBDS-like [Cucumis sativus]
gi|449511562|ref|XP_004163991.1| PREDICTED: ribosome maturation protein SBDS-like [Cucumis sativus]
Length = 359
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/312 (40%), Positives = 183/312 (58%), Gaps = 54/312 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E+
Sbjct: 1 MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVER------------- 47
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
D+DEVLQ+ V++NVSKG A ++LK
Sbjct: 48 ---------------------------------DLDEVLQSQIVYSNVSKGVLAKTKELK 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF T+DQTEIC IL +GELQ++ KER +Q+ NQF+DIATIV +K N ETKRP+T+SM
Sbjct: 75 AAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE ++ IHF+V+ N +SK+QALEVI L++ I+R+ MR+R V ++V L +KL
Sbjct: 135 IERLMRDIHFAVDPNHSSKKQALEVIHELQKHFPIKRSPMRLRYIVPE--QNVPSLLDKL 192
Query: 332 VKCATSVENEEWSGGGLL-LICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEE 390
+ S+ +++ SG +IC +DP YR+ + L+ + G E+L+ EG +
Sbjct: 193 NAWSASIVSDDQSGNQQRSIICELDPSFYRDCNPLM---SELHGRFEVLSFCLHEEG-DT 248
Query: 391 RSSQIENQFKDI 402
Q E+ ++++
Sbjct: 249 NVDQYEDDYENV 260
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 71/90 (78%), Gaps = 1/90 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK G RFEIACYKNKV+SWR+ +E+D+DEVLQ+ V++
Sbjct: 1 MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVERDLDEVLQSQIVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLIL 89
NVSKG A ++LK AF T+DQTEIC IL
Sbjct: 61 NVSKGVLAKTKELKAAFGTDDQTEICLKIL 90
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +E+ T+ + + L++L E+ +ER +Q+ NQF+DIATIV +K N ETK
Sbjct: 68 AKTKELKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQKTFNPETK 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+T+SMIE ++ IHF+V+ N +SK+QALE
Sbjct: 128 RPYTISMIERLMRDIHFAVDPNHSSKKQALE 158
>gi|388856592|emb|CCF49898.1| probable Shwachman-Bodian-Diamond syndrome protein [Ustilago
hordei]
Length = 243
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 165/287 (57%), Gaps = 51/287 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P NQIR+TNV++VR++K GKRFEIACYKNKV WR +E
Sbjct: 3 INQPANQIRLTNVSVVRLRKGGKRFEIACYKNKVREWRTGVES----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEV+Q VF NVSKGQ A +L+KAF
Sbjct: 46 -----------------------------DLDEVVQIANVFLNVSKGQIAPSGELQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + ++ IL KGELQ+ +KER ++EN ++DIAT V+ KC+ ++KRP+TV MIE
Sbjct: 77 TVEVEKVLHEILSKGELQVGEKERRHELENTWRDIATQVAAKCVEPQSKRPYTVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +H+SV +++KQQAL+VI L KQ + IERAQMR+R+ + + K+KE+L+
Sbjct: 137 MHDVHYSVKSGRSAKQQALDVIRLLQEKQTIPIERAQMRIRITIPTPAAN--KVKERLLA 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
VE ++WS ++ C IDP ++ I++L++ E G ++E LN
Sbjct: 195 LTQEVERQDWSHEWQMVAC-IDPAAFKSINQLIQGEIVGGASVETLN 240
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P NQIR+TNV++VR++K GKRFEIACYKNKV WR +E D+DEV+Q VF NVSK
Sbjct: 3 INQPANQIRLTNVSVVRLRKGGKRFEIACYKNKVREWRTGVESDLDEVVQIANVFLNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A +L+KAF T + ++ IL K
Sbjct: 63 GQIAPSGELQKAFGTVEVEKVLHEILSK 90
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 52/71 (73%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ GE+ER ++EN ++DIAT V+ KC+ ++KRP+TV MIE + +H+SV
Sbjct: 86 EILSKGELQVGEKERRHELENTWRDIATQVAAKCVEPQSKRPYTVGMIEKAMHDVHYSVK 145
Query: 437 VNKNSKQQALE 447
+++KQQAL+
Sbjct: 146 SGRSAKQQALD 156
>gi|301122555|ref|XP_002909004.1| ribosome maturation protein SBDS, putative [Phytophthora infestans
T30-4]
gi|262099766|gb|EEY57818.1| ribosome maturation protein SBDS, putative [Phytophthora infestans
T30-4]
Length = 331
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/295 (38%), Positives = 170/295 (57%), Gaps = 49/295 (16%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+I P +I +TNVAIVRM+K GKRFEIACYKNKV +WRN +E+
Sbjct: 3 GRISQPVGKIVLTNVAIVRMRKGGKRFEIACYKNKVFNWRNGVEE--------------- 47
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
D+DEVLQ V+ NVSKG+ A K D KA
Sbjct: 48 -------------------------------DVDEVLQIAKVYENVSKGKFAKKSDWSKA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F+ + + + C+ IL GELQ+S+ ER + +EN ++DIATIV++KC+N + RP+ ++IE
Sbjct: 77 FSVQSEEQACRAILDHGELQVSEGERKALVENMYRDIATIVADKCVNPTSNRPYPYTVIE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K+IH++V N+++KQQALE+I L + + + RA+M+++V A + +K L K
Sbjct: 137 RVMKEIHYAVIPNRSAKQQALELIKKLPEHIPLARAKMKIQVTTPAS--GAQAIKTGLQK 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+ E+ + ++ LI PG YR ++ LV+ T GQG+LE+++LK EGE
Sbjct: 195 EGAEI-VEQTGSETVRMVVLITPGSYRIVNSLVQEHTAGQGSLEVIDLKSHQEGE 248
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 65/88 (73%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+I P +I +TNVAIVRM+K GKRFEIACYKNKV +WRN +E+D+DEVLQ V+ NV
Sbjct: 3 GRISQPVGKIVLTNVAIVRMRKGGKRFEIACYKNKVFNWRNGVEEDVDEVLQIAKVYENV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLIL 89
SKG+ A K D KAF+ + + + C+ IL
Sbjct: 63 SKGKFAKKSDWSKAFSVQSEEQACRAIL 90
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
Q +L+ E+ E ER + +EN ++DIATIV++KC+N + RP+ ++IE +K+IH
Sbjct: 84 QACRAILDHGELQVSEGERKALVENMYRDIATIVADKCVNPTSNRPYPYTVIERVMKEIH 143
Query: 433 FSVNVNKNSKQQALE 447
++V N+++KQQALE
Sbjct: 144 YAVIPNRSAKQQALE 158
>gi|392597019|gb|EIW86341.1| Shwachman-Bodian-diamond syndrome protein [Coniophora puteana
RWD-64-598 SS2]
Length = 248
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 165/288 (57%), Gaps = 51/288 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+D+VLQ VF NVSKG+ A DL+KAF
Sbjct: 46 -----------------------------DLDDVLQISNVFINVSKGEVAKHNDLQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + E+ K IL KGE+QI++KER + + K+IAT+V+EKC++ T+RP+ V MIE
Sbjct: 77 TSEVDEVVKEILKKGEMQINEKERDHDLSSLRKEIATLVAEKCVDPATQRPYPVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + SV K +K Q E + L+ + IERA+MRVRV + + D ++L+E+LVK
Sbjct: 137 MAEAGVSVKAGKTAKSQVSETLKLLQSNSTLPIERARMRVRVSLPSA--DGERLREQLVK 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
CA VE E+ G I LI+PG++R I+EL++ E +G+G LE L
Sbjct: 195 CADKVERED-KGDTWETILLIEPGQFRVINELLQKECKGRGRLETLTF 241
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E D+D+VLQ VF NVSK
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVETDLDDVLQISNVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A DL+KAF T + E+ K IL K
Sbjct: 63 GEVAKHNDLQKAFGTSEVDEVVKEILKK 90
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 361 EIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFT 420
E+DE+V+ E+L E+ E+ER + + K+IAT+V+EKC++ T+RP+
Sbjct: 79 EVDEVVK---------EILKKGEMQINEKERDHDLSSLRKEIATLVAEKCVDPATQRPYP 129
Query: 421 VSMIEAGLKQIHFSVNVNKNSKQQALE 447
V MIE + + SV K +K Q E
Sbjct: 130 VGMIEKAMAEAGVSVKAGKTAKSQVSE 156
>gi|402218882|gb|EJT98957.1| Shwachman-Bodian-diamond syndrome protein [Dacryopinax sp. DJM-731
SS1]
Length = 241
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 172/286 (60%), Gaps = 47/286 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK GKRFEIACYKNKV WR+ +E
Sbjct: 3 IQQPSNQIKLTNVSVVRLKKGGKRFEIACYKNKVQEWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN+ D+VLQ VF NVSKGQAA +DL+KAF
Sbjct: 45 --------------TNL--------------DDVLQISNVFINVSKGQAAKSDDLEKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + +I IL KGELQ+ DKER+ ++ N +KDIAT V+EK ++ T+RP+ V MIE G
Sbjct: 77 TTELDKIVNEILKKGELQVGDKERAHELGNLWKDIATKVAEKVVDPSTQRPYPVGMIEKG 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+ + FSV K +K Q LE I L++ S+ ++R+RV V+ KD K+LKEK+V+ A
Sbjct: 137 MTEAGFSVKQGKGAKSQVLECIRQLQEKSSLPVQRVRMRVRVTMPAKDEKRLKEKIVEAA 196
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
SVE+E+W G +I +IDPG+++ ++EL+ + +G+G +E + L
Sbjct: 197 ESVEDEDW-GDEWEVILIIDPGQFKVLNELLANDLKGKGRIETMTL 241
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK GKRFEIACYKNKV WR+ +E ++D+VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSVVRLKKGGKRFEIACYKNKVQEWRSGVETNLDDVLQISNVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQAA +DL+KAF T + +I IL K
Sbjct: 63 GQAAKSDDLEKAFGTTELDKIVNEILKK 90
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ G++ER+ ++ N +KDIAT V+EK ++ T+RP+ V MIE G+ + FSV
Sbjct: 86 EILKKGELQVGDKERAHELGNLWKDIATKVAEKVVDPSTQRPYPVGMIEKGMTEAGFSVK 145
Query: 437 VNKNSKQQALE 447
K +K Q LE
Sbjct: 146 QGKGAKSQVLE 156
>gi|449550392|gb|EMD41356.1| hypothetical protein CERSUDRAFT_109957 [Ceriporiopsis subvermispora
B]
Length = 255
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 165/288 (57%), Gaps = 50/288 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E
Sbjct: 3 IQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN ID+VLQ VFTNVSKG+ A +DL+KAF+
Sbjct: 45 --------------TN--------------IDDVLQIANVFTNVSKGEVAKSQDLQKAFS 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D+ I K IL KGE+Q+ DKER + + ++IAT+V+EKC++ T+RP+ V +IE
Sbjct: 77 TTDRDTIVKEILKKGEVQVGDKEREHDLTSIRREIATLVAEKCVDPSTQRPYPVGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + FSV KN+K Q E I L+ + I+RA+MRVR + A D L+ ++++
Sbjct: 137 MSEAGFSVRPGKNAKSQVSECIKLLQTESKLPIQRARMRVRAALPAA--DADCLRARILE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
A SVE EE G I LIDPG++R ++EL++ E + +G LE L
Sbjct: 195 SAESVEREETGSDGWEAIMLIDPGQFRVLNELLQKECKNRGRLETLTF 242
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/88 (63%), Positives = 69/88 (78%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E +ID+VLQ VFTNVSK
Sbjct: 3 IQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVETNIDDVLQIANVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A +DL+KAF+T D+ I K IL K
Sbjct: 63 GEVAKSQDLQKAFSTTDRDTIVKEILKK 90
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV G++ER + + ++IAT+V+EKC++ T+RP+ V +IE + + FSV
Sbjct: 86 EILKKGEVQVGDKEREHDLTSIRREIATLVAEKCVDPSTQRPYPVGIIEKAMSEAGFSVR 145
Query: 437 VNKNSKQQALE 447
KN+K Q E
Sbjct: 146 PGKNAKSQVSE 156
>gi|76364277|gb|ABA41652.1| Shwachman-Bodian-Diamond protein-like protein, partial [Prototheca
wickerhamii]
Length = 197
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/228 (42%), Positives = 138/228 (60%), Gaps = 46/228 (20%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P Q R+TN+A+VR KK GKRFEIACYKNKV++WRN IE
Sbjct: 5 VFQPVGQKRLTNIAVVRTKKHGKRFEIACYKNKVLNWRNGIE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQT TV++NVSK A++EDLK F
Sbjct: 47 ----------------------------KDLDEVLQTTTVYSNVSKAVLASREDLKLVFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D+ +C+ IL+ G+LQ+SD+ER +++ +F+D+A ++SEKC+N T RP+T+ MIE
Sbjct: 79 TDDEEAVCRFILVHGDLQVSDRERKLELDTKFRDVAAVISEKCVNPATHRPYTIPMIERA 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKD 323
LK IHFSV+ + +K QALE +P L+ IERA+MR+R+ + +D
Sbjct: 139 LKDIHFSVDSTRPAKTQALEALPALQARFPIERARMRLRLTMPLASRD 186
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 54/87 (62%), Positives = 70/87 (80%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P Q R+TN+A+VR KK GKRFEIACYKNKV++WRN IEKD+DEVLQT TV++NVSK
Sbjct: 5 VFQPVGQKRLTNIAVVRTKKHGKRFEIACYKNKVLNWRNGIEKDLDEVLQTTTVYSNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILM 90
A++EDLK F T+D+ +C+ IL+
Sbjct: 65 AVLASREDLKLVFGTDDEEAVCRFILV 91
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 44/60 (73%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
+ ER +++ +F+D+A ++SEKC+N T RP+T+ MIE LK IHFSV+ + +K QALE
Sbjct: 99 DRERKLELDTKFRDVAAVISEKCVNPATHRPYTIPMIERALKDIHFSVDSTRPAKTQALE 158
>gi|290985445|ref|XP_002675436.1| Shwachman-Bodian-Diamond syndrome protein [Naegleria gruberi]
gi|284089032|gb|EFC42692.1| Shwachman-Bodian-Diamond syndrome protein [Naegleria gruberi]
Length = 453
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 130/306 (42%), Positives = 172/306 (56%), Gaps = 61/306 (19%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + TP NQI TNVA+VRMK FEIACYKN V+SWR IE
Sbjct: 1 MSRAVKTPVNQILHTNVAVVRMKIQKAVFEIACYKNSVVSWRKGIE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KD+ EV+Q TVFTNVSKG+AA K DL+
Sbjct: 47 --------------------------------KDLSEVVQIDTVFTNVSKGEAAKKTDLQ 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K F T D E+CK IL GELQ+S KER E+ FKDI TI++ KCIN +T+RP+ +
Sbjct: 75 KYFGTSDTKEVCKKILQDGELQVSTKEREEMYESMFKDIVTIITNKCINPDTQRPYPGGV 134
Query: 272 IEAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
IE LK QIHFSV +K++KQQALE I LK+ + IE+A MRV++ +S G +++KKL++
Sbjct: 135 IERALKEQIHFSVKPSKSTKQQALEAISKLKRKIPIEKAHMRVKLTLS-GKENIKKLRQ- 192
Query: 331 LVKCA------TSVENEEWSGGGLL--LICLIDPGKYREIDELVRTETRGQGTLELLNLK 382
L K A E +++S +IC IDPG YR I ++V E G +++L+
Sbjct: 193 LFKTANKEEEQVKFEQDDYSPETETANIICRIDPGLYRHIFDIVDEE---DGEVQVLDTT 249
Query: 383 EVTEGE 388
EG+
Sbjct: 250 VSEEGD 255
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%), Gaps = 1/90 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + TP NQI TNVA+VRMK FEIACYKN V+SWR IEKD+ EV+Q TVFT
Sbjct: 1 MSRAVKTPVNQILHTNVAVVRMKIQKAVFEIACYKNSVVSWRKGIEKDLSEVVQIDTVFT 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLIL 89
NVSKG+AA K DL+K F T D E+CK IL
Sbjct: 61 NVSKGEAAKKTDLQKYFGTSDTKEVCKKIL 90
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 390 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK-QIHFSVNVNKNSKQQALE 447
ER E+ FKDI TI++ KCIN +T+RP+ +IE LK QIHFSV +K++KQQALE
Sbjct: 101 EREEMYESMFKDIVTIITNKCINPDTQRPYPGGVIERALKEQIHFSVKPSKSTKQQALE 159
>gi|357165894|ref|XP_003580530.1| PREDICTED: ribosome maturation protein SBDS-like [Brachypodium
distachyon]
Length = 361
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/296 (41%), Positives = 172/296 (58%), Gaps = 52/296 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR++KAG+RFEIAC+ NKV+SWR+ +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKAGQRFEIACFPNKVLSWRSRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KD+DEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDLDEVLQSHTVYSNVSKGVLAKSKDLI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF T+D T IC IL KGELQ+S KER +Q+ +QF+DIATIV EK IN ET+RP+T++M
Sbjct: 75 KAFGTDDLTNICVEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTINPETRRPYTMTM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +IHF+V+ N SK+QAL VI L + I+RA + VR +A + L EKL
Sbjct: 135 IERLMHEIHFAVDPNLTSKEQALRVIKKLIEHFPIKRAPLTVR--FTAPKSKLGGLMEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
+ + V +++ SG L+C I+P +E ++ QG +E+L++ EG
Sbjct: 193 EEWSAIVLSKDESGNQSSLVCEIEPSILHSCEERLKD---VQGRVEVLSVSAHAEG 245
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR++KAG+RFEIAC+ NKV+SWR+ +EKD+DEVLQ+HTV++
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKAGQRFEIACFPNKVLSWRSRVEKDLDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL KAF T+D T IC IL K
Sbjct: 61 NVSKGVLAKSKDLIKAFGTDDLTNICVEILEK 92
>gi|115474403|ref|NP_001060798.1| Os08g0107500 [Oryza sativa Japonica Group]
gi|42408234|dbj|BAD09391.1| putative Shwachman-Bodian-Diamond syndrome protein [Oryza sativa
Japonica Group]
gi|113622767|dbj|BAF22712.1| Os08g0107500 [Oryza sativa Japonica Group]
gi|215693786|dbj|BAG88985.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200357|gb|EEC82784.1| hypothetical protein OsI_27530 [Oryza sativa Indica Group]
gi|222639780|gb|EEE67912.1| hypothetical protein OsJ_25763 [Oryza sativa Japonica Group]
Length = 357
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/296 (40%), Positives = 171/296 (57%), Gaps = 52/296 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRTRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLL 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF+T+D T IC IL KGELQ+S KER +Q+ +QF +IATIV +K IN ET+RP+T++M
Sbjct: 75 KAFSTDDHTAICLEILDKGELQVSGKEREAQLSSQFHEIATIVMDKTINPETRRPYTITM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +HF+V+ N SK+QAL+VI L + I+RA +RVR +A L EKL
Sbjct: 135 IERLMHDVHFAVDPNLTSKEQALKVIKKLTEHFPIKRAPLRVR--FTAPKSKFASLTEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
+ +V +++ SG ++C I+P R +E ++ QG +E+L++ EG
Sbjct: 193 EEWNANVISKDESGSQPSVVCEIEPSILRSCEERLKD---VQGRVEVLSVSAHAEG 245
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR +EKDIDEVLQ+HTV++
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRTRVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL KAF+T+D T IC IL K
Sbjct: 61 NVSKGVLAKSKDLLKAFSTDDHTAICLEILDK 92
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L+ E+ +ER +Q+ +QF +IATIV +K IN ET+RP+T++MIE + +HF+V
Sbjct: 87 LEILDKGELQVSGKEREAQLSSQFHEIATIVMDKTINPETRRPYTITMIERLMHDVHFAV 146
Query: 436 NVNKNSKQQAL 446
+ N SK+QAL
Sbjct: 147 DPNLTSKEQAL 157
>gi|395326146|gb|EJF58559.1| Shwachman-Bodian-diamond syndrome protein [Dichomitus squalens
LYAD-421 SS1]
Length = 248
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 167/288 (57%), Gaps = 50/288 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR+ +E
Sbjct: 3 IQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRSGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN ID+VLQ VF NVSKG+ A +L+KAF
Sbjct: 45 --------------TN--------------IDDVLQIANVFVNVSKGELAKSNELQKAFK 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D I K IL KGE+Q+ +KER + + ++IAT+V+EKC++ T+RP+ V +I+
Sbjct: 77 TTDTNTIVKEILEKGEVQVGEKEREHDLSSVRREIATLVAEKCVDPSTQRPYPVGVIDKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + FSV KN+K Q E I L+ + I+RA+MRV+V V G DV++L+ K+++
Sbjct: 137 MTEAGFSVKQGKNAKAQVSECIKLLQTHSQLPIQRARMRVKVSVPKG--DVERLRTKVLE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
CA SVE +E G + LIDPG++R I+EL++ E +G+G LE L
Sbjct: 195 CAESVEKDEQGGDEWETVLLIDPGQFRIINELLQKECKGRGRLETLTF 242
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 65/88 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR+ +E +ID+VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRSGVETNIDDVLQIANVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A +L+KAF T D I K IL K
Sbjct: 63 GELAKSNELQKAFKTTDTNTIVKEILEK 90
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE+ER + + ++IAT+V+EKC++ T+RP+ V +I+ + + FSV
Sbjct: 86 EILEKGEVQVGEKEREHDLSSVRREIATLVAEKCVDPSTQRPYPVGVIDKAMTEAGFSVK 145
Query: 437 VNKNSKQQALEEDKTSGIYSSL 458
KN+K Q E K +S L
Sbjct: 146 QGKNAKAQVSECIKLLQTHSQL 167
>gi|392572105|gb|EIW65277.1| Shwachman-Bodian-diamond syndrome protein [Trametes versicolor
FP-101664 SS1]
Length = 248
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 165/288 (57%), Gaps = 50/288 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR+ +E
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRSGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
DID+VLQ VF NVSKG+ A ++LKK+FN
Sbjct: 46 -----------------------------DIDDVLQIANVFMNVSKGEVAKSQELKKSFN 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D I K IL KGELQ+ DKER + + ++IAT+V+EKC++ T+RP+ V +I+
Sbjct: 77 TTDVNTIVKEILQKGELQVGDKEREHDLSSVRREIATLVAEKCVDPATQRPYPVGVIDKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + FSV KN+K Q E I L+ + I+RA+MRVR VS V DV+K+K K+++
Sbjct: 137 MTEAGFSVRPGKNAKAQVSECIKLLQTNSKLPIQRARMRVR--VSLPVADVEKVKPKVLE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
A SVE +E I LIDP ++R +++L++ E +G+G LE L
Sbjct: 195 GADSVEKDEQGADEWEAILLIDPSQFRILNDLLQKECKGRGRLETLTF 242
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR+ +E DID+VLQ VF NVSK
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRSGVETDIDDVLQIANVFMNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A ++LKK+FNT D I K IL K
Sbjct: 63 GEVAKSQELKKSFNTTDVNTIVKEILQK 90
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ G++ER + + ++IAT+V+EKC++ T+RP+ V +I+ + + FSV
Sbjct: 86 EILQKGELQVGDKEREHDLSSVRREIATLVAEKCVDPATQRPYPVGVIDKAMTEAGFSVR 145
Query: 437 VNKNSKQQALE 447
KN+K Q E
Sbjct: 146 PGKNAKAQVSE 156
>gi|388498820|gb|AFK37476.1| unknown [Lotus japonicus]
Length = 359
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 168/297 (56%), Gaps = 51/297 (17%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +E
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYPNTVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF T+D + IC IL KGELQ++ KER S + +QF+DIATIV K N ET+RP+T+SM
Sbjct: 75 AAFGTDDHSAICLEILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +++IHF+V+ + SK+QALE+I L++ I+R +R+R +A V L EKL
Sbjct: 135 IERLMREIHFAVDPHSTSKKQALELIHELQKHFPIKRCPLRIRA--AAPEDQVSALLEKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+ +V ++E S L +I ++PG Y++ + + + G+ E+L EG+
Sbjct: 193 NEWKATVISKEGSAAQLSVIFELEPGLYKDCHDFIMDKMHGR--FEVLAHSLYVEGD 247
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGNRFEIACYPNTVLSWRSGVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL AF T+D + IC IL K
Sbjct: 61 NVSKGVLAKSKDLIAAFGTDDHSAICLEILKK 92
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +ER S + +QF+DIATIV K N ET+RP+T+SMIE +++IHF+V
Sbjct: 87 LEILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISMIERLMREIHFAV 146
Query: 436 NVNKNSKQQALE 447
+ + SK+QALE
Sbjct: 147 DPHSTSKKQALE 158
>gi|226531680|ref|NP_001148818.1| shwachman-Bodian-Diamond syndrome protein [Zea mays]
gi|194708114|gb|ACF88141.1| unknown [Zea mays]
gi|195622368|gb|ACG33014.1| shwachman-Bodian-Diamond syndrome protein [Zea mays]
Length = 355
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 172/291 (59%), Gaps = 54/291 (18%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR+ +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRSRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG AN ++L
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGILANSKELA 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF T+D T+IC IL KGELQ+S KER +Q+ +QF+DIATIV EK IN ET+RP+T++M
Sbjct: 75 KAFGTDDLTQICIEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTINPETRRPYTITM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +IHF+V+ N SK+QAL+VI L + I+RA +RVR +A + L EK+
Sbjct: 135 IERLMHEIHFAVDPNLTSKEQALKVIKKLTEHFPIKRAPLRVR--FTAPKPNFPGLTEKI 192
Query: 332 VKC-ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
AT + +E S ++C I+P R +E ++ QG +E+L++
Sbjct: 193 GGWNATIISKDELSTQP-SIVCEIEPSLLRSCEERLKD---VQGRVEVLSV 239
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRSRVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG AN ++L KAF T+D T+IC IL K
Sbjct: 61 NVSKGILANSKELAKAFGTDDLTQICIEILEK 92
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 60/87 (68%)
Query: 360 REIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
+E+ + T+ Q +E+L E+ +ER +Q+ +QF+DIATIV EK IN ET+RP+
Sbjct: 71 KELAKAFGTDDLTQICIEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTINPETRRPY 130
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQAL 446
T++MIE + +IHF+V+ N SK+QAL
Sbjct: 131 TITMIERLMHEIHFAVDPNLTSKEQAL 157
>gi|356552763|ref|XP_003544732.1| PREDICTED: ribosome maturation protein SBDS-like [Glycine max]
Length = 358
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 177/314 (56%), Gaps = 57/314 (18%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +E
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KD+DEVLQ+HTV+TNVSKG A +DL
Sbjct: 47 --------------------------------KDLDEVLQSHTVYTNVSKGVLAKSKDLI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF T+D ++IC IL KGELQ++ KER S + +QF+DIATIV K N ET+RP+T+SM
Sbjct: 75 AAFGTDDHSKICLDILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +++IHF+V+ + SK+QALE+I L++ I+R +R+R +A V +L KL
Sbjct: 135 IERLMREIHFAVDPHSTSKKQALELIQELQKHFPIKRCPLRIR--ATAPDDQVPELLGKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEER 391
+ V ++E S L +I ++PG Y++ + V + G+ E+L EG+
Sbjct: 193 NEWNAIVISKEGSSAQLSVIFELEPGLYKDCHDFVMNKMHGR--FEVLAHSLYVEGD--- 247
Query: 392 SSQIE--NQFKDIA 403
+Q+E N ++DI
Sbjct: 248 -TQVEQYNDYEDIP 260
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 70/92 (76%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +EKD+DEVLQ+HTV+T
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVEKDLDEVLQSHTVYT 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL AF T+D ++IC IL K
Sbjct: 61 NVSKGVLAKSKDLIAAFGTDDHSKICLDILKK 92
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 368 TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
T+ + L++L E+ +ER S + +QF+DIATIV K N ET+RP+T+SMIE
Sbjct: 79 TDDHSKICLDILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISMIERL 138
Query: 428 LKQIHFSVNVNKNSKQQALE 447
+++IHF+V+ + SK+QALE
Sbjct: 139 MREIHFAVDPHSTSKKQALE 158
>gi|164657388|ref|XP_001729820.1| hypothetical protein MGL_2806 [Malassezia globosa CBS 7966]
gi|159103714|gb|EDP42606.1| hypothetical protein MGL_2806 [Malassezia globosa CBS 7966]
Length = 261
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 166/291 (57%), Gaps = 51/291 (17%)
Query: 101 NQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAAN 160
+Q +TNV+++R+++ GKRFEIACYKNKV WR +E
Sbjct: 14 DQSSLTNVSLIRLRRGGKRFEIACYKNKVREWREGVE----------------------- 50
Query: 161 KEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQT 220
KD+DEV+Q +VF NVSKGQ A+ +DL+KAF T D
Sbjct: 51 -----------------------KDLDEVIQIESVFLNVSKGQVASNDDLQKAFGTTDVN 87
Query: 221 EICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 280
++ IL KGELQ+ +KERS + N + +IATIV++KC+ ++++P+TV MIE +K H
Sbjct: 88 KVLLEILKKGELQVGEKERSHEFSNLWIEIATIVAQKCVEPKSQKPYTVGMIEKAMKDAH 147
Query: 281 FSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
FSV +K +K QALEVI L K + +ERA MR+ +SA K+ K+LK+K+V V
Sbjct: 148 FSVKPHKAAKIQALEVIKLLQSKSIIPLERAHMRISATMSA--KEGKRLKDKVVSLFAKV 205
Query: 339 ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
E E+WS ++ I+PG R+I+ L E +G+G +E L V + +E
Sbjct: 206 EEEDWS-DVWEIVGTIEPGSLRQINTLFENEVKGEGGVETLAFSAVDQDDE 255
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 9 NQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAAN 68
+Q +TNV+++R+++ GKRFEIACYKNKV WR +EKD+DEV+Q +VF NVSKGQ A+
Sbjct: 14 DQSSLTNVSLIRLRRGGKRFEIACYKNKVREWREGVEKDLDEVIQIESVFLNVSKGQVAS 73
Query: 69 KEDLKKAFNTEDQTEICKLILMK 91
+DL+KAF T D ++ IL K
Sbjct: 74 NDDLQKAFGTTDVNKVLLEILKK 96
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ GE+ERS + N + +IATIV++KC+ ++++P+TV MIE +K HFSV
Sbjct: 91 LEILKKGELQVGEKERSHEFSNLWIEIATIVAQKCVEPKSQKPYTVGMIEKAMKDAHFSV 150
Query: 436 NVNKNSKQQALE 447
+K +K QALE
Sbjct: 151 KPHKAAKIQALE 162
>gi|242080215|ref|XP_002444876.1| hypothetical protein SORBIDRAFT_07g000760 [Sorghum bicolor]
gi|241941226|gb|EES14371.1| hypothetical protein SORBIDRAFT_07g000760 [Sorghum bicolor]
Length = 355
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 171/291 (58%), Gaps = 54/291 (18%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR+ +E
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRSRVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KDIDEVLQ+HTV++NVSKG A +DL
Sbjct: 47 --------------------------------KDIDEVLQSHTVYSNVSKGVLAKSKDLT 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KAF T+D T+IC IL KGELQ+S KER +Q+ +QF+DIATIV EK IN ET+RP+T++M
Sbjct: 75 KAFGTDDLTQICIEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTINPETRRPYTITM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE + +IHF+V+ N SK+QAL+VI L + I+RA +RVR +A + L E++
Sbjct: 135 IERLMHEIHFAVDPNLTSKEQALKVIKKLTEHFPIKRAPLRVR--FTAPKPNFPGLMERI 192
Query: 332 VKC-ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ AT + +E S ++C I+P +E ++ QG +E+L++
Sbjct: 193 GEWNATVISKDELSTQP-SIVCEIEPSLLHSCEERLKD---VQGRVEVLSV 239
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 56/92 (60%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR++K G+RFEIAC+ NKV+SWR+ +EKDIDEVLQ+HTV++
Sbjct: 1 MSRTLVQPVGQKRLTNVAVVRLRKHGQRFEIACFPNKVLSWRSRVEKDIDEVLQSHTVYS 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL KAF T+D T+IC IL K
Sbjct: 61 NVSKGVLAKSKDLTKAFGTDDLTQICIEILEK 92
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 61/90 (67%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +++ + T+ Q +E+L E+ +ER +Q+ +QF+DIATIV EK IN ET+
Sbjct: 68 AKSKDLTKAFGTDDLTQICIEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTINPETR 127
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQAL 446
RP+T++MIE + +IHF+V+ N SK+QAL
Sbjct: 128 RPYTITMIERLMHEIHFAVDPNLTSKEQAL 157
>gi|449016156|dbj|BAM79558.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 278
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/322 (35%), Positives = 170/322 (52%), Gaps = 75/322 (23%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P Q R+TNV++VRM+K GKRFEIACY N V+++R H
Sbjct: 1 MFQPVTQKRLTNVSVVRMRKGGKRFEIACYPNMVMAYREG-----------HV------- 42
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
+D+DEV+Q VF NVSKG+ A DL++ F
Sbjct: 43 ----------------------------RDLDEVIQVEDVFENVSKGKLAANADLERCFG 74
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D+ + IL+ G+LQ+SD+ER Q + +IA++V+ K I+ ETK+P V +IE
Sbjct: 75 TRDRHAVLLQILLHGDLQVSDRERQYQSTRKLHEIASVVAAKTISRETKKPLPVGLIEKA 134
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L++IHF+V N+ +K QALEVIP L+ + +ERA++R+R+ V + +D K +K +L
Sbjct: 135 LREIHFAVQPNRPAKAQALEVIPLLRAQSGLDLERARLRLRIHVPSQ-RDAKAVKARLEP 193
Query: 334 ------------------------CATSVENEEW-SGGGLLLICLIDPGKYREIDELVRT 368
A E+EEW GG LL DPG +REI+E+V+
Sbjct: 194 LQQGETDGTHSSSRSDSVRMKDGSAAVESESEEWLPGGALLWTVQADPGAFREIEEIVQR 253
Query: 369 ETRGQGTLELLNLKEVTEGEEE 390
ET QG +E+ +L+ V + E+E
Sbjct: 254 ETNQQGIVEVASLR-VLDDEDE 274
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 60/87 (68%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P Q R+TNV++VRM+K GKRFEIACY N V+++R +D+DEV+Q VF NVSK
Sbjct: 1 MFQPVTQKRLTNVSVVRMRKGGKRFEIACYPNMVMAYREGHVRDLDEVIQVEDVFENVSK 60
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILM 90
G+ A DL++ F T D+ + IL+
Sbjct: 61 GKLAANADLERCFGTRDRHAVLLQILL 87
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 368 TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
T R L++L ++ + ER Q + +IA++V+ K I+ ETK+P V +IE
Sbjct: 75 TRDRHAVLLQILLHGDLQVSDRERQYQSTRKLHEIASVVAAKTISRETKKPLPVGLIEKA 134
Query: 428 LKQIHFSVNVNKNSKQQALE 447
L++IHF+V N+ +K QALE
Sbjct: 135 LREIHFAVQPNRPAKAQALE 154
>gi|359807207|ref|NP_001241105.1| uncharacterized protein LOC100776352 [Glycine max]
gi|255639820|gb|ACU20203.1| unknown [Glycine max]
Length = 355
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/324 (37%), Positives = 181/324 (55%), Gaps = 60/324 (18%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +E
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVE-------------- 46
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
KD DEVLQ+HTV+TNVSKG A +DL
Sbjct: 47 --------------------------------KDPDEVLQSHTVYTNVSKGVLAKSKDLI 74
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF T+D ++IC IL KGELQ++ KER S + +QF+DIATIV K N ET+RP+T+SM
Sbjct: 75 SAFGTDDHSKICLDILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISM 134
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
IE +++IHF+V+ + SK+QALE+I L++ I+R +R+R +A V +L KL
Sbjct: 135 IERLMREIHFAVDPHSTSKKQALELIQELQKHFPIKRCPLRIR--ATAPDDQVPELLGKL 192
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEER 391
+ +V ++E G +I ++PG Y++ + V + G+ E+L EG+
Sbjct: 193 NEWNATVISKE---GSSAVIFELEPGLYKDCHDFVMNKMHGR--FEVLAHSLYVEGD--- 244
Query: 392 SSQIE--NQFKDIATIVSEKCINT 413
+Q+E N ++DI + ++ ++
Sbjct: 245 -TQVEQYNDYEDIPEALPKETYDS 267
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ + P Q R+TNVA+VR+KK G RFEIACY N V+SWR+ +EKD DEVLQ+HTV+T
Sbjct: 1 MSRTLVQPIGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVEKDPDEVLQSHTVYT 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKG A +DL AF T+D ++IC IL K
Sbjct: 61 NVSKGVLAKSKDLISAFGTDDHSKICLDILKK 92
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%)
Query: 368 TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
T+ + L++L E+ +ER S + +QF+DIATIV K N ET+RP+T+SMIE
Sbjct: 79 TDDHSKICLDILKKGELQVAGKERESLLSSQFRDIATIVMHKTYNPETQRPYTISMIERL 138
Query: 428 LKQIHFSVNVNKNSKQQALE 447
+++IHF+V+ + SK+QALE
Sbjct: 139 MREIHFAVDPHSTSKKQALE 158
>gi|302695933|ref|XP_003037645.1| hypothetical protein SCHCODRAFT_65136 [Schizophyllum commune H4-8]
gi|300111342|gb|EFJ02743.1| hypothetical protein SCHCODRAFT_65136 [Schizophyllum commune H4-8]
Length = 249
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/291 (39%), Positives = 163/291 (56%), Gaps = 50/291 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKI P+NQI++TNV+IVR+KK GKRFEIACYKNKV +RN +E
Sbjct: 1 MSKINQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEYRNGVET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
D+D+VLQ VF NVSKG+ A DLKK
Sbjct: 47 --------------------------------DLDDVLQISNVFINVSKGELAKAADLKK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+F T DQ I K IL KGE+Q+ +KER + + K+IAT+V+EKC++ T+RP++V +I
Sbjct: 75 SFGTTDQDTIVKEILKKGEMQVGEKEREHDLASLRKEIATLVAEKCVDPATQRPYSVGII 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ + + FSV K++K Q E I L+ + I+RA+MR+RV + D KL+ K
Sbjct: 135 DKAMTEAGFSVKQGKSAKSQVSECIRLLQTESQLPIQRARMRIRVALPKA--DADKLRAK 192
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+V+ A VE EE LI+P ++R I+E+++ E +G+G +E L
Sbjct: 193 IVESAEKVETEESPADEWEATMLIEPSQFRVINEILQKECKGRGRIETLTF 243
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKI P+NQI++TNV+IVR+KK GKRFEIACYKNKV +RN +E D+D+VLQ VF N
Sbjct: 1 MSKINQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEYRNGVETDLDDVLQISNVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A DLKK+F T DQ I K IL K
Sbjct: 61 VSKGELAKAADLKKSFGTTDQDTIVKEILKK 91
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER + + K+IAT+V+EKC++ T+RP++V +I+ + + FSV
Sbjct: 87 EILKKGEMQVGEKEREHDLASLRKEIATLVAEKCVDPATQRPYSVGIIDKAMTEAGFSVK 146
Query: 437 VNKNSKQQALE 447
K++K Q E
Sbjct: 147 QGKSAKSQVSE 157
>gi|348676069|gb|EGZ15887.1| hypothetical protein PHYSODRAFT_360984 [Phytophthora sojae]
Length = 383
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 171/324 (52%), Gaps = 77/324 (23%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+I P +I +TNVA+VRM+K GKRFEIACYKNKV +WRN +E+
Sbjct: 4 GRISQPVGKIVLTNVAVVRMRKGGKRFEIACYKNKVFNWRNGVEE--------------- 48
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
DIDEVLQ V+ NVSKG+ A K D KA
Sbjct: 49 -------------------------------DIDEVLQIAKVYENVSKGKFAKKSDWAKA 77
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIE----------------------------N 245
F + + + C+ IL GELQ+S+ ER + +E +
Sbjct: 78 FGVQSEEQACRAILDHGELQVSEGERKALVEKYALFFSAPNGYIYFIFYTKVFMLYFIRS 137
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
++DIATIV++KC+N + RP+ ++IE +K+IH++V N+++KQQALE+I L + +
Sbjct: 138 MYRDIATIVADKCVNPTSNRPYPYTVIERVMKEIHYAVIPNRSAKQQALELIKKLPEHIP 197
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
+ RA+M+++V A VK +K L+K + E+ + ++ LI PG YR ++ L
Sbjct: 198 LARAKMKIQVTTPA--SGVKAIKAGLLKEEAEI-VEQTGSETVRMVVLITPGSYRIVNSL 254
Query: 366 VRTETRGQGTLELLNLKEVTEGEE 389
V+ T GQG+LE+++LK EGE
Sbjct: 255 VQEHTGGQGSLEVIDLKSHQEGEH 278
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 64/88 (72%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+I P +I +TNVA+VRM+K GKRFEIACYKNKV +WRN +E+DIDEVLQ V+ NV
Sbjct: 4 GRISQPVGKIVLTNVAVVRMRKGGKRFEIACYKNKVFNWRNGVEEDIDEVLQIAKVYENV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLIL 89
SKG+ A K D KAF + + + C+ IL
Sbjct: 64 SKGKFAKKSDWAKAFGVQSEEQACRAIL 91
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 42/53 (79%)
Query: 395 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
I + ++DIATIV++KC+N + RP+ ++IE +K+IH++V N+++KQQALE
Sbjct: 135 IRSMYRDIATIVADKCVNPTSNRPYPYTVIERVMKEIHYAVIPNRSAKQQALE 187
>gi|336364310|gb|EGN92670.1| hypothetical protein SERLA73DRAFT_116950 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378311|gb|EGO19469.1| hypothetical protein SERLADRAFT_478915 [Serpula lacrymans var.
lacrymans S7.9]
Length = 248
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/290 (39%), Positives = 162/290 (55%), Gaps = 51/290 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV+IVR+KK GKRFEIACYKNKV +RN +E +
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEYRNGVETSL------------------ 47
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+VLQ VF NVSKG+ A DL+KAF T
Sbjct: 48 ----------------------------DDVLQISNVFINVSKGEVAKSNDLQKAFGTTQ 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+I K IL KGELQ+ +KER + K+IAT+V+EKC++ T+RP+ V MIE + +
Sbjct: 80 IDDIVKEILKKGELQVGEKERDHDLTALRKEIATLVAEKCVDPATQRPYPVGMIEKAMAE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
SV V K +K Q E + L+ + I+RA+MRVRV + + D ++L+EKL+ A
Sbjct: 140 AGVSVKVGKTAKSQVSETLKLLQSGSTLPIQRARMRVRVLMPSA--DAERLREKLLVTAE 197
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
VE +E +G + LIDPG++R I+EL++ E +G+G +E L V E
Sbjct: 198 KVERDE-TGESWEAVLLIDPGQFRVINELLQKECKGRGRVETLTFAAVAE 246
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV+IVR+KK GKRFEIACYKNKV +RN +E +D+VLQ VF NVSKG+
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEYRNGVETSLDDVLQISNVFINVSKGEV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A DL+KAF T +I K IL K
Sbjct: 66 AKSNDLQKAFGTTQIDDIVKEILKK 90
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 9/87 (10%)
Query: 361 EIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFT 420
+ID++V+ E+L E+ GE+ER + K+IAT+V+EKC++ T+RP+
Sbjct: 79 QIDDIVK---------EILKKGELQVGEKERDHDLTALRKEIATLVAEKCVDPATQRPYP 129
Query: 421 VSMIEAGLKQIHFSVNVNKNSKQQALE 447
V MIE + + SV V K +K Q E
Sbjct: 130 VGMIEKAMAEAGVSVKVGKTAKSQVSE 156
>gi|169844426|ref|XP_001828934.1| hypothetical protein CC1G_03728 [Coprinopsis cinerea okayama7#130]
gi|116510046|gb|EAU92941.1| hypothetical protein CC1G_03728 [Coprinopsis cinerea okayama7#130]
Length = 247
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 161/293 (54%), Gaps = 55/293 (18%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR +E
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+D+VLQ VF NVSKG+ A +DL+KAF D
Sbjct: 46 --------------------------DLDDVLQISNVFVNVSKGEVARSQDLQKAFGKSD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL KGELQ+ +KER + + K+IAT+V+EK ++ T+RP+ V +IE + +
Sbjct: 80 VQAIIKEILKKGELQVGEKERDHDLSSVRKEIATLVAEKSVDPATQRPYPVGIIEKAMTE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
FSV K +K Q E I L+ S+ + R+R++VS ++D +KLKE++++ A +V
Sbjct: 140 AGFSVKPGKTAKSQVTECIKLLQSDSSLPIQRARMRIKVSMPLEDSEKLKERILQSAETV 199
Query: 339 ENE----EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
E+E EW + LIDP ++R I+EL++ E +G+G LE L G
Sbjct: 200 EHEASADEWE-----ITILIDPSQFRVINELLQKECKGRGRLETLTFAATASG 247
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 63/85 (74%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR +E D+D+VLQ VF NVSKG+
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVETDLDDVLQISNVFVNVSKGEV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A +DL+KAF D I K IL K
Sbjct: 66 ARSQDLQKAFGKSDVQAIIKEILKK 90
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER + + K+IAT+V+EK ++ T+RP+ V +IE + + FSV
Sbjct: 86 EILKKGELQVGEKERDHDLSSVRKEIATLVAEKSVDPATQRPYPVGIIEKAMTEAGFSVK 145
Query: 437 VNKNSKQQALE 447
K +K Q E
Sbjct: 146 PGKTAKSQVTE 156
>gi|390603760|gb|EIN13151.1| Shwachman-Bodian-diamond syndrome protein [Punctularia
strigosozonata HHB-11173 SS5]
Length = 253
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 162/290 (55%), Gaps = 50/290 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P QI++TNV+IVR+KK GKRFEIACYKNKV WRN +E
Sbjct: 3 IQQPVGQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
K++D+VLQ +F NVSKG+ A DL+KAF
Sbjct: 45 ----------------------------KNLDDVLQIGNIFVNVSKGEVAKNNDLQKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D+ EI K IL KGE+Q+ +KER + + ++IAT+V+EKC++ T+RP+ +IE
Sbjct: 77 TTDRDEIVKQILQKGEVQVGEKEREHDLSSLRREIATLVAEKCVDPTTQRPYPSGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSA--GVKDVKKLKEKL 331
+ + FSV +K++K Q + ++ + I+RA+MRVRV V A + LK K+
Sbjct: 137 MTEAGFSVKQDKSAKSQVGACLKAIQAGSALPIQRARMRVRVSVPAKEAGEGEGSLKSKV 196
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++ A VE+EE G ++ LIDPG++R I+EL++ +G+G +E L
Sbjct: 197 LEGAEKVESEETGADGWDVVMLIDPGQFRVINELLQKHCKGKGRIETLTF 246
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/88 (61%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P QI++TNV+IVR+KK GKRFEIACYKNKV WRN +EK++D+VLQ +F NVSK
Sbjct: 3 IQQPVGQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVEKNLDDVLQIGNIFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A DL+KAF T D+ EI K IL K
Sbjct: 63 GEVAKNNDLQKAFGTTDRDEIVKQILQK 90
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV GE+ER + + ++IAT+V+EKC++ T+RP+ +IE + + FSV
Sbjct: 86 QILQKGEVQVGEKEREHDLSSLRREIATLVAEKCVDPTTQRPYPSGIIEKAMTEAGFSVK 145
Query: 437 VNKNSKQQ 444
+K++K Q
Sbjct: 146 QDKSAKSQ 153
>gi|19114781|ref|NP_593869.1| SBDS family ribosome maturation protein Sdo1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|3183321|sp|O14179.1|SDO1_SCHPO RecName: Full=Ribosome maturation protein sdo1
gi|2330820|emb|CAB11050.1| SBDS family ribosome maturation protein Sdo1 (predicted)
[Schizosaccharomyces pombe]
Length = 246
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 160/290 (55%), Gaps = 51/290 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P QIR+TNV++V+ KK GKRFE+ACYKNKV WRN IE
Sbjct: 3 ISQPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEVLQ H VF NVSKG A+++DLKKAF
Sbjct: 46 -----------------------------DLDEVLQIHNVFNNVSKGHVASRQDLKKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D +I IL KG+ Q+ +KER Q+ + ++DI + V+ C++ +KRP+ S+IE
Sbjct: 77 TDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNSKRPYPASIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L FSV+ +K +K QALE I L K + I RA+MR+R+ V VK K L+E+L
Sbjct: 137 LSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVD--VKQGKALRERLRS 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKE 383
A +E E I L+ PG Y+ IDELVR ET+ +G +++L++ E
Sbjct: 195 LADEIEEEN-IDDEYECIALVIPGNYKLIDELVRNETKNRGMVQVLDMSE 243
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/88 (62%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P QIR+TNV++V+ KK GKRFE+ACYKNKV WRN IE D+DEVLQ H VF NVSK
Sbjct: 3 ISQPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A+++DLKKAF T+D +I IL K
Sbjct: 63 GHVASRQDLKKAFGTDDIDKIILEILQK 90
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L + GE+ER Q+ + ++DI + V+ C++ +KRP+ S+IE L FSV
Sbjct: 85 LEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNSKRPYPASIIEKALSDCGFSV 144
Query: 436 NVNKNSKQQALE 447
+ +K +K QALE
Sbjct: 145 STSKTAKSQALE 156
>gi|358053984|dbj|GAA99879.1| hypothetical protein E5Q_06582 [Mixia osmundae IAM 14324]
Length = 257
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 168/297 (56%), Gaps = 53/297 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KKAGKRFEIACYKNK WR+ +E D+ EV+Q +F NVSKG
Sbjct: 5 PSNQIKLTNVSVVRLKKAGKRFEIACYKNKAREWRSGVETDLSEVIQIEQIFANVSKGAV 64
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
+ +DLKKAF T D+ E+L
Sbjct: 65 SPAQDLKKAFGTT-------------DVQEILLQ-------------------------- 85
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGELQ+ +KER+ +I+ ++IA +E+C++ ET+RP TV+MIE + Q
Sbjct: 86 -------ILKKGELQVGEKERAHEIDAMRREIALATAERCVDPETQRPITVTMIEKVMDQ 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ ++V+ NK+ K QALE+I ++ + I+RAQMR+R+ + G K LK ++
Sbjct: 139 LGYAVHTNKSIKSQALELIKQIQSESALPIQRAQMRIRLTLPVG--QSKTLKGQITPLCA 196
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTET--RGQ-GTLELLNLKEVTEGEEE 390
S+E +E + ++ LIDPG ++ I+EL+ +G+ G LE L+ ++ + E
Sbjct: 197 SIEAQETNSSEWEIVALIDPGSFKIINELIHASAGPKGELGKLETLSFAAISHADGE 253
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KKAGKRFEIACYKNK WR+ +E D+ EV+Q +F NVSKG
Sbjct: 5 PSNQIKLTNVSVVRLKKAGKRFEIACYKNKAREWRSGVETDLSEVIQIEQIFANVSKGAV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
+ +DLKKAF T D EI IL K
Sbjct: 65 SPAQDLKKAFGTTDVQEILLQILKK 89
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 51/72 (70%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
L++L E+ GE+ER+ +I+ ++IA +E+C++ ET+RP TV+MIE + Q+ ++V
Sbjct: 84 LQILKKGELQVGEKERAHEIDAMRREIALATAERCVDPETQRPITVTMIEKVMDQLGYAV 143
Query: 436 NVNKNSKQQALE 447
+ NK+ K QALE
Sbjct: 144 HTNKSIKSQALE 155
>gi|320582802|gb|EFW97019.1| SBDS multi-domain protein [Ogataea parapolymorpha DL-1]
Length = 250
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 119/300 (39%), Positives = 177/300 (59%), Gaps = 55/300 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P++QIR+TNV++VRMKK KRFEIACY+NKV +R +E
Sbjct: 1 MAVINQPSSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDYRAGVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ A+ +DLKK
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQVASNDDLKK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF + + EI IL KGE+Q+S+KERS+Q E +I TI+S KCIN +TK+ + +MI
Sbjct: 75 AFGSTNTDEIILEILKKGEIQLSEKERSAQNEKLHNEILTIISTKCINPKTKKRYPPTMI 134
Query: 273 EAGLKQIHF-SVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKE 329
+ LK++ F SVN KN+K +ALE I L KQ + I RA M++R+ +++ K+ K++
Sbjct: 135 DKALKELKFNSVNA-KNAKAKALEAIKLLVEKQIIPISRAHMKLRISLNS--KEYTKIET 191
Query: 330 KLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+L K +V++EE ++CLI+P Y+E+ ELV++ +G++E+L++ + EGE+
Sbjct: 192 ELKKIIATVQDEEKVDSETEIVCLIEPEYYKELTELVKSR---KGSVEVLDMAVIAEGEQ 248
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P++QIR+TNV++VRMKK KRFEIACY+NKV +R +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPSSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDYRAGVEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A+ +DLKKAF + + EI IL K
Sbjct: 61 VSKGQVASNDDLKKAFGSTNTDEIILEILKK 91
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF-S 434
LE+L E+ E+ERS+Q E +I TI+S KCIN +TK+ + +MI+ LK++ F S
Sbjct: 86 LEILKKGEIQLSEKERSAQNEKLHNEILTIISTKCINPKTKKRYPPTMIDKALKELKFNS 145
Query: 435 VNVNKNSKQQALE 447
VN KN+K +ALE
Sbjct: 146 VNA-KNAKAKALE 157
>gi|353241465|emb|CCA73278.1| probable Shwachman-Bodian-Diamond syndrome protein [Piriformospora
indica DSM 11827]
Length = 253
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 160/288 (55%), Gaps = 50/288 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV+IVR+KK GKRFEIACYKNK+ WRN +E
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKIQEWRNGVET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
DID+VLQ + VF NVSKG+ A EDLKKAF +
Sbjct: 46 --------------------------DIDDVLQVNNVFVNVSKGEVARTEDLKKAFGKAN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I + IL GE+Q+ +KER ++ +++IAT+VSEKC++ +T+RP V MIE + +
Sbjct: 80 TDAIVREILQHGEVQVGEKEREHELSTLWREIATLVSEKCVDPQTERPIPVGMIEKAMHE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
FSV KN+K Q E I ++ + I+RA+MRV++ + + ++ ++EK+++ A
Sbjct: 140 AGFSVKAGKNAKAQVSECIRLIQTNSKLPIQRARMRVKLTIP--LANIDAVREKVLQSAD 197
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEV 384
VE + + LIDP ++R ++EL++ T G+G LE L V
Sbjct: 198 RVEEDITGATDWEITLLIDPSQFRVLNELLQQHTEGKGRLETLTFANV 245
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 64/83 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV+IVR+KK GKRFEIACYKNK+ WRN +E DID+VLQ + VF NVSKG+
Sbjct: 6 PSNQIKLTNVSIVRLKKGGKRFEIACYKNKIQEWRNGVETDIDDVLQVNNVFVNVSKGEV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLIL 89
A EDLKKAF + I + IL
Sbjct: 66 ARTEDLKKAFGKANTDAIVREIL 88
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE+ER ++ +++IAT+VSEKC++ +T+RP V MIE + + FSV
Sbjct: 86 EILQHGEVQVGEKEREHELSTLWREIATLVSEKCVDPQTERPIPVGMIEKAMHEAGFSVK 145
Query: 437 VNKNSKQQALE 447
KN+K Q E
Sbjct: 146 AGKNAKAQVSE 156
>gi|56754090|gb|AAW25234.1| SJCHGC02313 protein [Schistosoma japonicum]
Length = 320
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/285 (38%), Positives = 167/285 (58%), Gaps = 49/285 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV WR+ +E +++EVLQ H VFTNVSK
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGSRYELACYPNKVQPWRDKLETNLNEVLQAHCVFTNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ ANK+++ F + F
Sbjct: 63 GQFANKKEM-------------------------------FAH---------------FR 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED+ EI K IL GELQ+++KER + F+D+A IVSE+C+N E R +TV+M+E
Sbjct: 77 TEDEREIIKSILEHGELQLTEKERLVGQQALFRDVAKIVSERCVNPENNRAYTVTMVEKM 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDV-KKLKEKLVK- 333
+K H S+ NK++KQ ALEVI L+ ++ A + V ++ +KD+ + + E+L++
Sbjct: 137 MKDCHISLKANKSAKQHALEVIKQLRSAPGLKIAPSMMEVNITM-LKDISEPVIERLLQL 195
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLEL 378
C++ + E S G LI +++PGKY I+ L++ E +G+ +E+
Sbjct: 196 CSSIIRQGESSDGLFELIAVVEPGKYCLIETLLQKEIKGKYCIEI 240
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV WR+ +E +++EVLQ H VFTNVSK
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGSRYELACYPNKVQPWRDKLETNLNEVLQAHCVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ ANK+++ F TED+ EI K IL
Sbjct: 63 GQFANKKEMFAHFRTEDEREIIKSIL 88
>gi|344258698|gb|EGW14802.1| Ribosome maturation protein SBDS [Cricetulus griseus]
Length = 181
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 114/144 (79%)
Query: 171 NMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKG 230
N+ I S REKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL KG
Sbjct: 2 NLHRIFSPALSREKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKG 61
Query: 231 ELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSK 290
E+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV NK++K
Sbjct: 62 EVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTK 121
Query: 291 QQALEVIPTLKQCMSIERAQMRVR 314
QQALEVI LK+ + IERA MR+R
Sbjct: 122 QQALEVIKQLKEKIKIERAHMRLR 145
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 56 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 115
Query: 437 VNKNSKQQALE 447
NK++KQQALE
Sbjct: 116 PNKSTKQQALE 126
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
EKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL K
Sbjct: 14 EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTK 60
>gi|331214638|ref|XP_003320000.1| hypothetical protein PGTG_00912 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298990|gb|EFP75581.1| hypothetical protein PGTG_00912 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 270
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 176/313 (56%), Gaps = 66/313 (21%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P+NQI++TNV+IVR+KKAGKRFEIACYKNKV+ WR+ +E
Sbjct: 3 VFQPSNQIKLTNVSIVRLKKAGKRFEIACYKNKVMEWRSGVET----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+ EV+QT T+F+NVSKGQ A+ DL K+F
Sbjct: 46 -----------------------------DLSEVIQTDTIFSNVSKGQLASHSDLLKSFP 76
Query: 216 TEDQT--------EICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPF 267
++T EI IL GELQ+SDKER+ + ++ ++I +V+EK ++ T RP
Sbjct: 77 VPNKTPATVLPSEEILLEILKNGELQVSDKERAQALVDKKREIIHLVAEKTVDPTTNRPH 136
Query: 268 TVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTL---KQCMSIERAQMRVRVEVSAGVKDV 324
T SMIE L ++H SVN++K+SK QALE+I +L + +SI R+QM++R+ + K+
Sbjct: 137 TSSMIEKALDELHLSVNLSKSSKTQALELIKSLSSRPEIISISRSQMKIRLTIPT-TKES 195
Query: 325 KKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI-DELVRTETRGQGT------LE 377
KKLK +++ T VE +E LI LI+PG+++ I D L + + G LE
Sbjct: 196 KKLKPIILESITKVEVDETDEDQWELIALIEPGQFKFISDTLNQFHLKNAGNNTSRFKLE 255
Query: 378 LLNL-KEVTEGEE 389
L+L E EG+E
Sbjct: 256 TLSLTAEQVEGDE 268
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 66/79 (83%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P+NQI++TNV+IVR+KKAGKRFEIACYKNKV+ WR+ +E D+ EV+QT T+F+NVSK
Sbjct: 3 VFQPSNQIKLTNVSIVRLKKAGKRFEIACYKNKVMEWRSGVETDLSEVIQTDTIFSNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT 82
GQ A+ DL K+F ++T
Sbjct: 63 GQLASHSDLLKSFPVPNKT 81
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ ++ER+ + ++ ++I +V+EK ++ T RP T SMIE L ++H SV
Sbjct: 93 LEILKNGELQVSDKERAQALVDKKREIIHLVAEKTVDPTTNRPHTSSMIEKALDELHLSV 152
Query: 436 NVNKNSKQQALE 447
N++K+SK QALE
Sbjct: 153 NLSKSSKTQALE 164
>gi|170084141|ref|XP_001873294.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650846|gb|EDR15086.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 249
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 163/297 (54%), Gaps = 50/297 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR +E
Sbjct: 1 MPQIQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
TN+ D+VLQ VF NVSKG+ A DL+K
Sbjct: 46 -----------------TNL--------------DDVLQISNVFVNVSKGEVAKSGDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF + +I K IL KGE+Q+ +KER + + K+IAT+V EKC++ T+RP+ V MI
Sbjct: 75 AFGKLELGDIVKEILKKGEVQVGEKERDHDLTSLRKEIATLVGEKCVDPSTQRPYPVGMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E + + FSV NK +K Q E I L+ + I+RA+MR++ VS +D +L+E+
Sbjct: 135 EKAMAEAGFSVKQNKTAKSQVSECIKQLQTDSNLPIQRARMRIK--VSMPTEDGGRLREQ 192
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
+ CA VE + + + LIDP ++R I+EL++ E +G+G +E L+ G
Sbjct: 193 VTACAEKVEIDNITQADWEVTMLIDPSQFRLINELLQKECKGRGRMETLSFAATASG 249
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 66/91 (72%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WR +E ++D+VLQ VF N
Sbjct: 1 MPQIQQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVETNLDDVLQISNVFVN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A DL+KAF + +I K IL K
Sbjct: 61 VSKGEVAKSGDLQKAFGKLELGDIVKEILKK 91
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE+ER + + K+IAT+V EKC++ T+RP+ V MIE + + FSV
Sbjct: 87 EILKKGEVQVGEKERDHDLTSLRKEIATLVGEKCVDPSTQRPYPVGMIEKAMAEAGFSVK 146
Query: 437 VNKNSKQQALE 447
NK +K Q E
Sbjct: 147 QNKTAKSQVSE 157
>gi|325190000|emb|CCA24483.1| ribosome maturation protein SBDS putative [Albugo laibachii Nc14]
Length = 379
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/301 (34%), Positives = 169/301 (56%), Gaps = 52/301 (17%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P QI MTNVA+VR K+ GKRFE+ACYKNKV++WRN +E
Sbjct: 5 RIGQPVGQILMTNVAVVRYKRNGKRFEVACYKNKVLNWRNGVE----------------- 47
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KD++EVLQT V+ NVSKG+ A K D +AF
Sbjct: 48 -----------------------------KDLNEVLQTTKVYENVSKGKFARKCDWVEAF 78
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+ E C++IL GELQ+S+ ER +Q EN ++DIATI++EKC+N + RP+ S++E
Sbjct: 79 HVNQDEEACRIILEHGELQVSEGERKAQTENMYRDIATIIAEKCVNPASNRPYPYSVVER 138
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTLK-QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K+IH V +N+++KQQAL++I ++ + + IERA+M++++ V + + + + +
Sbjct: 139 LMKEIHVGVVLNRSAKQQALDIIKKMQLKKIPIERAKMKIQITVDDAPNETQSIVQLIAD 198
Query: 334 C-----ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
T + ++ G + LI PG +R +DE++ +G+ LE+L+L + +G
Sbjct: 199 SILEHEGTYLVKKDLQGATQRAVFLIHPGNFRIVDEIIHRIGKGRINLEVLDLCDQEQGA 258
Query: 389 E 389
+
Sbjct: 259 Q 259
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/87 (57%), Positives = 65/87 (74%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P QI MTNVA+VR K+ GKRFE+ACYKNKV++WRN +EKD++EVLQT V+ NVS
Sbjct: 5 RIGQPVGQILMTNVAVVRYKRNGKRFEVACYKNKVLNWRNGVEKDLNEVLQTTKVYENVS 64
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLIL 89
KG+ A K D +AF+ E C++IL
Sbjct: 65 KGKFARKCDWVEAFHVNQDEEACRIIL 91
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ E ER +Q EN ++DIATI++EKC+N + RP+ S++E +K+IH V +
Sbjct: 90 ILEHGELQVSEGERKAQTENMYRDIATIIAEKCVNPASNRPYPYSVVERLMKEIHVGVVL 149
Query: 438 NKNSKQQALE 447
N+++KQQAL+
Sbjct: 150 NRSAKQQALD 159
>gi|358340697|dbj|GAA48539.1| ribosome maturation protein SDO1 [Clonorchis sinensis]
Length = 337
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 170/296 (57%), Gaps = 53/296 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV +WR+ +E
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGNRYELACYPNKVRAWRDRLE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN+ DEVLQ VFTNVSKGQ ANK+++ + F
Sbjct: 45 --------------TNL--------------DEVLQIQCVFTNVSKGQFANKKEMFQVFR 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TE++ +I KLIL +GELQ+++KERS + ++ F+D+A +VSE+C+N ET R +TV+MIE
Sbjct: 77 TENEIDIIKLILEQGELQLTEKERSVEQQSLFRDVAKMVSERCVNPETNRAYTVTMIEKM 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+K H S+ NK +KQ ALEVI L+ I A M V V + + V + +K+ +++
Sbjct: 137 MKDCHISLKANKTAKQHALEVIKHLRSTDGFKIAPAMMEVVVSIDSSV--LPLVKDSVLQ 194
Query: 334 CATSV--ENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL-NLKEVTE 386
T + + + G L +I+P KY I+ L+ +E +G+ +E++ N K VT
Sbjct: 195 LCTDIIRQGQNADTGNYELTVVIEPEKYGAIESLLHSEIKGKYCIEIVGNTKHVTH 250
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 70/86 (81%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV +WR+ +E ++DEVLQ VFTNVSK
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGNRYELACYPNKVRAWRDRLETNLDEVLQIQCVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ ANK+++ + F TE++ +I KLIL
Sbjct: 63 GQFANKKEMFQVFRTENEIDIIKLIL 88
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%)
Query: 360 REIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
+E+ ++ RTE +L E+ E+ERS + ++ F+D+A +VSE+C+N ET R +
Sbjct: 69 KEMFQVFRTENEIDIIKLILEQGELQLTEKERSVEQQSLFRDVAKMVSERCVNPETNRAY 128
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
TV+MIE +K H S+ NK +KQ ALE
Sbjct: 129 TVTMIEKMMKDCHISLKANKTAKQHALE 156
>gi|326525607|dbj|BAJ88850.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326529251|dbj|BAK01019.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 363
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 163/294 (55%), Gaps = 53/294 (18%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+ P Q R+TNVA+VR++K G+RFEIAC+ NKVISWR +E
Sbjct: 5 LVQPVGQKRLTNVAVVRLRKGGQRFEIACFPNKVISWRERVE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+DEVLQ+HTV++NVSKG A +DL + F
Sbjct: 47 ----------------------------KDLDEVLQSHTVYSNVSKGVLAKSKDLIRTFG 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T+D TEIC IL KGELQ+S KER +Q+ +QF+DIATIV EK I+TET+ PFT+ MIE+
Sbjct: 79 TDDLTEICLEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTISTETRHPFTMKMIESI 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ +IHF+V+ N SK+QAL VI L I+RA + VR A ++ L EKL
Sbjct: 139 MHEIHFAVDPNLTSKEQALRVIKKLIENPKYKIKRAPLTVR--FIAPKSNLAGLMEKLDG 196
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEG 387
V +++ S ++C I+P +E ++ QG +E+L++ EG
Sbjct: 197 WNAIVLSKDESADQSSVVCEIEPSILHSCEEKLKDV---QGRVEVLSVSARAEG 247
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 68/88 (77%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+ P Q R+TNVA+VR++K G+RFEIAC+ NKVISWR +EKD+DEVLQ+HTV++NVSK
Sbjct: 5 LVQPVGQKRLTNVAVVRLRKGGQRFEIACFPNKVISWRERVEKDLDEVLQSHTVYSNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A +DL + F T+D TEIC IL K
Sbjct: 65 GVLAKSKDLIRTFGTDDLTEICLEILEK 92
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +ER +Q+ +QF+DIATIV EK I+TET+ PFT+ MIE+ + +IHF+V
Sbjct: 87 LEILEKGELQVSGKEREAQLSSQFRDIATIVMEKTISTETRHPFTMKMIESIMHEIHFAV 146
Query: 436 NVNKNSKQQAL 446
+ N SK+QAL
Sbjct: 147 DPNLTSKEQAL 157
>gi|256071902|ref|XP_002572277.1| hypothetical protein [Schistosoma mansoni]
gi|353232105|emb|CCD79460.1| hypothetical protein Smp_007970 [Schistosoma mansoni]
Length = 322
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 160/286 (55%), Gaps = 47/286 (16%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTPTNQ R+TN+++VR+KK G R+E+ACY NKV +WR+ +E
Sbjct: 3 LFTPTNQKRLTNISVVRLKKGGNRYELACYPNKVQAWRDKLE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN+ DEVLQ H VFTNVSKGQ ANK+++ F
Sbjct: 45 --------------TNL--------------DEVLQAHCVFTNVSKGQFANKKEMYVHFR 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED+ +I + IL GELQ+++KER + F+D+A +VSE+C+N E R +TV+MIE
Sbjct: 77 TEDEKQIIQTILEHGELQLTEKERLVGQQALFRDVAKMVSERCVNPENNRAYTVTMIEKM 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK-C 334
+K H S+ NK++KQ ALEVI L+ + A + V ++ K + E+L++ C
Sbjct: 137 MKDCHISLKANKSAKQHALEVIKQLRSAPGFKIAPSMMEVNITIQKDSCKPVIERLLQLC 196
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
V+ E S G L +++P KY I+ L+ E +G ++E+++
Sbjct: 197 NDIVQQSESSDGLYDLTAVVEPEKYGSIETLLHNEIKGHYSIEIVD 242
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 69/86 (80%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTPTNQ R+TN+++VR+KK G R+E+ACY NKV +WR+ +E ++DEVLQ H VFTNVSK
Sbjct: 3 LFTPTNQKRLTNISVVRLKKGGNRYELACYPNKVQAWRDKLETNLDEVLQAHCVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ ANK+++ F TED+ +I + IL
Sbjct: 63 GQFANKKEMYVHFRTEDEKQIIQTIL 88
>gi|260941700|ref|XP_002615016.1| hypothetical protein CLUG_05031 [Clavispora lusitaniae ATCC 42720]
gi|238851439|gb|EEQ40903.1| hypothetical protein CLUG_05031 [Clavispora lusitaniae ATCC 42720]
Length = 252
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 164/300 (54%), Gaps = 54/300 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P+ QI++TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPSGQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VFTNVSKGQ AN +DL
Sbjct: 46 -------------------------------KDLDEVLQIPQVFTNVSKGQGANNDDLMT 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T +Q EI IL KGE+Q+++KERS+ ++ + + ++S KC+N +K+ + SMI
Sbjct: 75 AFGTTNQDEIILEILDKGEIQLNEKERSANLQQKQNEFLNLISTKCLNPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ L Q+ F +N NK +K QAL+ I L KQ + I RAQM+V++ V A V D +
Sbjct: 135 QKALGQLKFHLNPNKPTKTQALDAIKLLIAKQVIPIARAQMKVKITVLARVHDA--YTQH 192
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLNLKEVTE 386
+V VE+E + +IDP Y+ I +++ E+ +G+G++E+L++ V E
Sbjct: 193 IVPLLDKVESENAGPKLFEAVAIIDPSNYKNIVDILSGESGQVKKGEGSVEVLDMAAVQE 252
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P+ QI++TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ VFTN
Sbjct: 1 MAVINQPSGQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPQVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL AF T +Q EI IL K
Sbjct: 61 VSKGQGANNDDLMTAFGTTNQDEIILEILDK 91
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L+ E+ E+ERS+ ++ + + ++S KC+N +K+ + SMI+ L Q+ F +
Sbjct: 86 LEILDKGEIQLNEKERSANLQQKQNEFLNLISTKCLNPRSKKRYPPSMIQKALGQLKFHL 145
Query: 436 NVNKNSKQQALE 447
N NK +K QAL+
Sbjct: 146 NPNKPTKTQALD 157
>gi|296411739|ref|XP_002835587.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629373|emb|CAZ79744.1| unnamed protein product [Tuber melanosporum]
Length = 262
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 167/306 (54%), Gaps = 67/306 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNVAIVR+KK KR+E+ACYKNKV+ +R +E D+DEVLQ VFTNVSKG
Sbjct: 6 PSNQIKLTNVAIVRLKKGKKRYELACYKNKVLEYRTGVETDLDEVLQIQQVFTNVSKGAV 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A DL+K+F S E I E+LQ
Sbjct: 66 APHADLQKSFGPK--------STTESIILEILQ--------------------------- 90
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
KGELQ+ +KER++++E ++ +IV+ KC++ +KR +T +MIE L +
Sbjct: 91 ----------KGELQVGEKERNAKLEQTHTEVISIVASKCVDPTSKRVYTPTMIEKALAE 140
Query: 279 IHF--------------SVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVK 322
+ V K+SK QALE I L Q +SI RA+MR+RV
Sbjct: 141 LSAKKREEGEEGAPRWSGVTDKKSSKAQALEAIKALVYHQPISIARARMRLRVVAP---- 196
Query: 323 DVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLK 382
K++KEK+++ VE+E + GG ++PGKY+ I +LV +ET+G+G +E+++
Sbjct: 197 --KRVKEKVMEFIEQVEDEVYEGGNWECTAFVEPGKYKSIADLVASETKGKGRVEVIDTA 254
Query: 383 EVTEGE 388
V+EG+
Sbjct: 255 VVSEGD 260
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 59/77 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNVAIVR+KK KR+E+ACYKNKV+ +R +E D+DEVLQ VFTNVSKG
Sbjct: 6 PSNQIKLTNVAIVRLKKGKKRYELACYKNKVLEYRTGVETDLDEVLQIQQVFTNVSKGAV 65
Query: 67 ANKEDLKKAFNTEDQTE 83
A DL+K+F + TE
Sbjct: 66 APHADLQKSFGPKSTTE 82
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF-- 433
LE+L E+ GE+ER++++E ++ +IV+ KC++ +KR +T +MIE L ++
Sbjct: 86 LEILQKGELQVGEKERNAKLEQTHTEVISIVASKCVDPTSKRVYTPTMIEKALAELSAKK 145
Query: 434 ------------SVNVNKNSKQQALE 447
V K+SK QALE
Sbjct: 146 REEGEEGAPRWSGVTDKKSSKAQALE 171
>gi|150951269|ref|XP_001387563.2| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|149388454|gb|EAZ63540.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 254
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 167/300 (55%), Gaps = 53/300 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPMSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ VF NVSKGQ AN +DL K
Sbjct: 46 -------------------------------KDIDEVLQIPQVFQNVSKGQVANNDDLMK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T Q EI IL KGE+Q+ +KERS+ ++ + + TI+S KCIN ++K+ + SMI
Sbjct: 75 AFGTTSQDEIILEILNKGEIQLHEKERSANLQQKQNEFLTIISTKCINPKSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ L ++ F +N +K +KQQAL+ I L KQ + I RAQM+V++ +S K K++
Sbjct: 135 QKALNEVKFHLNPSKPTKQQALDAIRLLVEKQIIPIARAQMKVKITLSKKAYQ-KVYKDE 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE----TRGQGTLELLNLKEVTE 386
+ S+ +E+ G +C+IDP YR+I +++ + ++ G++E++++ + E
Sbjct: 194 IEPSIDSIIDEDKDGKVYECVCIIDPINYRKIVDVLEGDGAKISKSDGSIEVIDMAAIKE 253
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/91 (63%), Positives = 67/91 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +EKDIDEVLQ VF N
Sbjct: 1 MAVINQPMSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFQN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL KAF T Q EI IL K
Sbjct: 61 VSKGQVANNDDLMKAFGTTSQDEIILEILNK 91
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
D+L++ T ++ + LE+LN E+ E+ERS+ ++ + + TI+S KCIN ++K+ +
Sbjct: 70 DDLMKAFGTTSQDEIILEILNKGEIQLHEKERSANLQQKQNEFLTIISTKCINPKSKKRY 129
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
SMI+ L ++ F +N +K +KQQAL+
Sbjct: 130 PPSMIQKALNEVKFHLNPSKPTKQQALD 157
>gi|389742230|gb|EIM83417.1| Shwachman-Bodian-diamond syndrome protein [Stereum hirsutum
FP-91666 SS1]
Length = 250
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 154/284 (54%), Gaps = 50/284 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+ QI++TNV+IVR+KK GKR+EIACYKNKV WRN +E
Sbjct: 3 INQPSGQIKLTNVSIVRLKKGGKRYEIACYKNKVQEWRNGVES----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+D+VLQ VF NVSKG+ A DLKK+F
Sbjct: 46 -----------------------------DLDDVLQISNVFVNVSKGEVAKAGDLKKSFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T++ + K IL KG+LQI +KER + + ++IAT+V+EKC++ T+ P +V +IE
Sbjct: 77 TDNVQTVVKEILNKGDLQIGEKEREHDLTSLRREIATLVAEKCVDPATQTPHSVGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + FSV NKN+K Q E I L+ + I+RA+MR+RV + + D +L+ K+++
Sbjct: 137 MNEAGFSVRANKNAKSQVSECIKLLQTNSTLPIQRARMRIRVSIPSA--DEARLRGKILE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
VE E G LIDP +R I +L+ E +G+G +E
Sbjct: 195 GVEKVEREGPDGDEWSTTLLIDPSHFRTITDLLNKECKGKGRIE 238
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 65/88 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+ QI++TNV+IVR+KK GKR+EIACYKNKV WRN +E D+D+VLQ VF NVSK
Sbjct: 3 INQPSGQIKLTNVSIVRLKKGGKRYEIACYKNKVQEWRNGVESDLDDVLQISNVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A DLKK+F T++ + K IL K
Sbjct: 63 GEVAKAGDLKKSFGTDNVQTVVKEILNK 90
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN ++ GE+ER + + ++IAT+V+EKC++ T+ P +V +IE + + FSV
Sbjct: 86 EILNKGDLQIGEKEREHDLTSLRREIATLVAEKCVDPATQTPHSVGIIEKAMNEAGFSVR 145
Query: 437 VNKNSKQQALE 447
NKN+K Q E
Sbjct: 146 ANKNAKSQVSE 156
>gi|76364275|gb|ABA41651.1| Shwachman-Bodian-Diamond protein-like protein [Pyropia yezoensis]
Length = 252
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 146/275 (53%), Gaps = 51/275 (18%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +Q+R+TNVA+VR+K GKRFE+A YKN V+SWR
Sbjct: 6 PVSQVRLTNVAVVRLKAKGKRFEVAAYKNTVLSWREG----------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
+KD+DEVLQ +VFTNVSKG AN +DL+ AF T D
Sbjct: 43 -----------------------NQKDLDEVLQITSVFTNVSKGVLANSKDLQAAFGTTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IC+ IL G LQ+SD+ER F IA+IV++KC++ ET RP V +IE +K
Sbjct: 80 VPAICERILRTGALQVSDREREYTSGRLFSSIASIVADKCVDAETHRPIPVGVIERSMKD 139
Query: 279 -IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATS 337
+ +SV +++K QALEVI L M IERAQMR+ VE A VK K +K L
Sbjct: 140 LLGYSVVPGRSAKAQALEVIKGLAAHMPIERAQMRLDVE--APVKWGKGVKGGLDGLVVG 197
Query: 338 -VENEEWSGGGLLLICLIDPGKYREIDELVRTETR 371
V EEW GGG L++P + + E+V E+R
Sbjct: 198 LVGAEEW-GGGFRASYLVEPKNFNAVQEVVAKESR 231
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 63/83 (75%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +Q+R+TNVA+VR+K GKRFE+A YKN V+SWR +KD+DEVLQ +VFTNVSKG
Sbjct: 6 PVSQVRLTNVAVVRLKAKGKRFEVAAYKNTVLSWREGNQKDLDEVLQITSVFTNVSKGVL 65
Query: 67 ANKEDLKKAFNTEDQTEICKLIL 89
AN +DL+ AF T D IC+ IL
Sbjct: 66 ANSKDLQAAFGTTDVPAICERIL 88
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ-IHFSVNVNKNSKQQAL 446
+ ER F IA+IV++KC++ ET RP V +IE +K + +SV +++K QAL
Sbjct: 97 DREREYTSGRLFSSIASIVADKCVDAETHRPIPVGVIERSMKDLLGYSVVPGRSAKAQAL 156
Query: 447 E 447
E
Sbjct: 157 E 157
>gi|403414726|emb|CCM01426.1| predicted protein [Fibroporia radiculosa]
Length = 254
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 160/285 (56%), Gaps = 50/285 (17%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KK GKRFE+ACYKNKV WR+ +E
Sbjct: 6 PSNQIKLTNVSVVRLKKGGKRFEVACYKNKVQEWRSGVE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
TN+ D+VLQ V+ NVSKG+ A +DL+KAF T D
Sbjct: 45 -----------TNL--------------DDVLQIANVYINVSKGELAKSQDLQKAFGTTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I IL KGELQ+ +KER + + ++IAT+V+EKC++ T+R + V +IE L
Sbjct: 80 VDRIVSEILKKGELQVGEKEREHDLSSIRREIATLVAEKCVDPATQRRYPVGIIEKALVD 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
FSV KN+K Q E I L+ + I+RA+MRV + + V DV+++K+++++ A
Sbjct: 140 AGFSVRPGKNAKSQVSECIKLLQTESKLPIQRARMRVFITIP--VADVERVKKRVIESAE 197
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE +E I LIDPG++R +++L++ E G+G LE L
Sbjct: 198 IVEKDETGAEQWETILLIDPGQFRVLNDLLQKECAGRGRLETLTF 242
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/85 (56%), Positives = 64/85 (75%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KK GKRFE+ACYKNKV WR+ +E ++D+VLQ V+ NVSKG+
Sbjct: 6 PSNQIKLTNVSVVRLKKGGKRFEVACYKNKVQEWRSGVETNLDDVLQIANVYINVSKGEL 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A +DL+KAF T D I IL K
Sbjct: 66 AKSQDLQKAFGTTDVDRIVSEILKK 90
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER + + ++IAT+V+EKC++ T+R + V +IE L FSV
Sbjct: 86 EILKKGELQVGEKEREHDLSSIRREIATLVAEKCVDPATQRRYPVGIIEKALVDAGFSVR 145
Query: 437 VNKNSKQQALE 447
KN+K Q E
Sbjct: 146 PGKNAKSQVSE 156
>gi|344231561|gb|EGV63443.1| Shwachman-Bodian-diamond syndrome protein [Candida tenuis ATCC
10573]
Length = 253
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 167/301 (55%), Gaps = 55/301 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P QI++TNV++VRM+K KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPGTQIKLTNVSMVRMRKGKKRFEIACYQNKVQDWRSRVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQAAN EDL
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQAANNEDLLT 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F T +Q I IL KGE+Q+++KERS+ + + + I+S KCIN ++KR + SMI
Sbjct: 75 GFGTTNQDAIIAEILDKGEIQLNEKERSANLRQKQNEFLNIISTKCINPKSKRRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ L Q+ F +N +K++K QALE I L KQ I RAQM+V+V + VKD ++ ++
Sbjct: 135 QKALNQLKFHLNPSKSAKLQALEAIKLLVAKQLFPIVRAQMKVKVILVNRVKD--QVYDR 192
Query: 331 LVKCAT-SVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLNLKEVT 385
+K ++E+E + +I +IDP YR I ++++ E RG+GT+E+L++ V
Sbjct: 193 YIKPMLDAIEDEHQTDKVFEVISIIDPTNYRAIVDVLQGENAKIKRGEGTIEVLDMAVVK 252
Query: 386 E 386
+
Sbjct: 253 D 253
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P QI++TNV++VRM+K KRFEIACY+NKV WR+ +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPGTQIKLTNVSMVRMRKGKKRFEIACYQNKVQDWRSRVEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAAN EDL F T +Q I IL K
Sbjct: 61 VSKGQAANNEDLLTGFGTTNQDAIIAEILDK 91
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ERS+ + + + I+S KCIN ++KR + SMI+ L Q+ F +N
Sbjct: 87 EILDKGEIQLNEKERSANLRQKQNEFLNIISTKCINPKSKRRYPPSMIQKALNQLKFHLN 146
Query: 437 VNKNSKQQALE 447
+K++K QALE
Sbjct: 147 PSKSAKLQALE 157
>gi|145347942|ref|XP_001418418.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578647|gb|ABO96711.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 236
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/286 (35%), Positives = 154/286 (53%), Gaps = 51/286 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P ++TNVA+VR K G RFEIACYKN V+S+R
Sbjct: 1 MFQPVGIKKLTNVAVVRHKTHGSRFEIACYKNTVLSYRRG-------------------- 40
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
EKD+D VLQ+ V+ NVSKG A E+L +A+
Sbjct: 41 --------------------------HEKDLDNVLQSSEVYVNVSKGVVARDEELVRAYG 74
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T D+ +IC++IL KGELQ+S++ER ++ E+ F+D T + EKC+N T RP+ MIE+
Sbjct: 75 TTDRGKICEIILAKGELQVSERERKAESESAFRDAVTTLVEKCVNPGTNRPYPPGMIESA 134
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
L+ IHFSV+ +++KQQALE +P L++ I+RA+MR V + ++ L + + +
Sbjct: 135 LRDIHFSVDPKRSAKQQALEALPKLQEIFPIKRAEMRFAAVVPSAKEE--SLMAFVRENS 192
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE + S + +DP YR +D+LV+ +G LE++ L
Sbjct: 193 GKVETNDLSASEASVTFTMDPSTYRALDKLVK---ECKGRLEVVTL 235
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P ++TNVA+VR K G RFEIACYKN V+S+R EKD+D VLQ+ V+ NVSK
Sbjct: 1 MFQPVGIKKLTNVAVVRHKTHGSRFEIACYKNTVLSYRRGHEKDLDNVLQSSEVYVNVSK 60
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A E+L +A+ T D+ +IC++IL K
Sbjct: 61 GVVARDEELVRAYGTTDRGKICEIILAK 88
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
+ELVR T RG+ +L E+ E ER ++ E+ F+D T + EKC+N T RP+
Sbjct: 67 EELVRAYGTTDRGKICEIILAKGELQVSERERKAESESAFRDAVTTLVEKCVNPGTNRPY 126
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
MIE+ L+ IHFSV+ +++KQQALE
Sbjct: 127 PPGMIESALRDIHFSVDPKRSAKQQALE 154
>gi|302805637|ref|XP_002984569.1| hypothetical protein SELMODRAFT_5748 [Selaginella moellendorffii]
gi|300147551|gb|EFJ14214.1| hypothetical protein SELMODRAFT_5748 [Selaginella moellendorffii]
Length = 162
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 129/207 (62%), Gaps = 46/207 (22%)
Query: 104 RMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKED 163
R TNVA+VR+KK GKRFEIACYKNKV+SWR+ +E
Sbjct: 2 RHTNVAVVRLKKHGKRFEIACYKNKVLSWRSKVE-------------------------- 35
Query: 164 LKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEIC 223
KDIDEVLQTHTV+ NVSKG A ++L +AF T D+ +IC
Sbjct: 36 --------------------KDIDEVLQTHTVYCNVSKGILAKSKELMEAFGTTDEEKIC 75
Query: 224 KLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 283
IL KGELQI+ KER Q+ +QF+DIATIV +K +N ET+RP+T+SMIE +++ HF+V
Sbjct: 76 LEILEKGELQIAGKEREVQLSSQFRDIATIVMDKTLNPETERPYTISMIERFMREAHFAV 135
Query: 284 NVNKNSKQQALEVIPTLKQCMSIERAQ 310
+ +++SK+QALE+I L++ I RAQ
Sbjct: 136 DPHRSSKKQALELIRELQKHYPIMRAQ 162
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 78/108 (72%), Gaps = 4/108 (3%)
Query: 12 RMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKED 71
R TNVA+VR+KK GKRFEIACYKNKV+SWR+ +EKDIDEVLQTHTV+ NVSKG A ++
Sbjct: 2 RHTNVAVVRLKKHGKRFEIACYKNKVLSWRSKVEKDIDEVLQTHTVYCNVSKGILAKSKE 61
Query: 72 LKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMT----NVAIVRMKK 115
L +AF T D+ +IC IL K +I +++++ ++A + M K
Sbjct: 62 LMEAFGTTDEEKICLEILEKGELQIAGKEREVQLSSQFRDIATIVMDK 109
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 62/91 (68%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
K +E+ E T + LE+L E+ +ER Q+ +QF+DIATIV +K +N ET+
Sbjct: 57 AKSKELMEAFGTTDEEKICLEILEKGELQIAGKEREVQLSSQFRDIATIVMDKTLNPETE 116
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
RP+T+SMIE +++ HF+V+ +++SK+QALE
Sbjct: 117 RPYTISMIERFMREAHFAVDPHRSSKKQALE 147
>gi|426356432|ref|XP_004045576.1| PREDICTED: ribosome maturation protein SBDS [Gorilla gorilla
gorilla]
Length = 184
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 141/294 (47%), Gaps = 115/294 (39%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A KEDL AF T+
Sbjct: 63 GQVAKKEDLISAFGTD-------------------------------------------- 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
DQTEICK IL KG + R F M E
Sbjct: 79 --DQTEICKQILTKGXXXLG-----------------------------RRFGEEMEE-- 105
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
ALEVI LK+ M IERA MR+R G D+ +
Sbjct: 106 -------------KDGVALEVIKQLKEKMKIERAHMRLR----PGQSDIPE--------- 139
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 140 ------------TFNVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 181
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/88 (78%), Positives = 78/88 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ A KEDL AF T+DQTEICK IL K
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQILTK 90
>gi|149236748|ref|XP_001524251.1| shwachman-Bodian-Diamond syndrome protein [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451786|gb|EDK46042.1| shwachman-Bodian-Diamond syndrome protein [Lodderomyces
elongisporus NRRL YB-4239]
Length = 251
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 162/298 (54%), Gaps = 52/298 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR IE
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRLKIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ AN +DL K
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQVANNDDLMK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T DQ EI IL KGE+Q+++KER++ ++ + + TI+S KCIN +K+ + +MI
Sbjct: 75 AFGTTDQDEIVLEILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRYPPTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L +I F +N K +K QALE I L KQ + I RAQM+V++ ++ K +K E
Sbjct: 135 EKALNEIKFHLNPTKTTKTQALEAIKALVEKQIIPIARAQMKVKINLTK--KAYQKAYEN 192
Query: 331 LVKCATS-VENEEWSGGGLLLICLIDPGKYREIDELV-RTETRGQGTLELLNLKEVTE 386
+K A +E E G ++ +IDP YR + L E + +G++E+L++ V E
Sbjct: 193 DIKPAIDHLEELENDGKMYEIVGIIDPMNYRVLVNLFEEKELKNEGSVEVLDMSAVKE 250
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/91 (64%), Positives = 67/91 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR IEKD+DEVLQ VF N
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRLKIEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL KAF T DQ EI IL K
Sbjct: 61 VSKGQVANNDDLMKAFGTTDQDEIVLEILNK 91
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 363 DELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
D+L++ T + + LE+LN E+ E+ER++ ++ + + TI+S KCIN +K+ +
Sbjct: 70 DDLMKAFGTTDQDEIVLEILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRY 129
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQALE 447
+MIE L +I F +N K +K QALE
Sbjct: 130 PPTMIEKALNEIKFHLNPTKTTKTQALE 157
>gi|344305186|gb|EGW35418.1| hypothetical protein SPAPADRAFT_58634 [Spathaspora passalidarum
NRRL Y-27907]
Length = 253
Score = 181 bits (458), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 167/301 (55%), Gaps = 55/301 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ AN +DL+K
Sbjct: 46 -------------------------------KDLDEVLQIPQVFMNVSKGQVANNDDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T +Q EI IL KGE+Q+++KER++ ++ + + I+S KCIN +K+ + SMI
Sbjct: 75 AFGTTNQDEIILEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F +N K +K QAL+ I L KQ + I RAQM++R+ ++ K +K+
Sbjct: 135 EKALNEVKFHLNPTKQTKIQALDAIKMLVEKQIIPIARAQMKIRIILTK--KAYQKVFTS 192
Query: 331 LVKC-ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLNLKEVT 385
+K V+ EE++G ++ +IDP YR + ++ + +G+GT+E+L++ V
Sbjct: 193 DIKPNIDQVDEEEFTGKQYEIVGIIDPINYRVLVSIIEGDQAKIGKGEGTIEVLDMSAVK 252
Query: 386 E 386
E
Sbjct: 253 E 253
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPQVFMN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+KAF T +Q EI IL K
Sbjct: 61 VSKGQVANNDDLQKAFGTTNQDEIILEILNK 91
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+LN E+ E+ER++ ++ + + I+S KCIN +K+ + SMIE L ++ F +
Sbjct: 86 LEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMIEKALNEVKFHL 145
Query: 436 NVNKNSKQQALE 447
N K +K QAL+
Sbjct: 146 NPTKQTKIQALD 157
>gi|440633429|gb|ELR03348.1| hypothetical protein GMDG_06095 [Geomyces destructans 20631-21]
Length = 298
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 170/333 (51%), Gaps = 92/333 (27%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I TP+NQI++TNV++VR+KK KRFEIACYKNKV+ WRN IEK++DEVLQ VF NVSK
Sbjct: 5 IKTPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRNGIEKNLDEVLQIPNVFVNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
G+ A KEDL KAF KD+
Sbjct: 65 GETAKKEDLAKAFG--------------KDV----------------------------- 81
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
Q +I IL KGELQ+ +KER++Q+E +I IV+ K ++ +TK+ +T MIE
Sbjct: 82 --KQDDIILEILNKGELQVGEKERAAQLERVHNEIVDIVAGKLVDPKTKKVYTTGMIEKA 139
Query: 276 LKQI--------------------------HF----SVNVNKNSKQQALEVIPTL--KQC 303
L + H VN KN+K QALE I L +Q
Sbjct: 140 LDMVSAAGSQERQEKNAAGAEAPAEGEEKKHLPTWTGVNATKNAKSQALEAIKALVARQP 199
Query: 304 MSIERAQMRVRVEVS------------AGVKDVKK---LKEKLVKCATSVENEEWSGGGL 348
+ +ERA+M +R+ G +D ++ +KEK+++ +E +E +G
Sbjct: 200 IPVERARMSLRITCPMKELKNTLKGQKVGGEDGERKMTVKEKILELVEQIERQEVTGSEW 259
Query: 349 LLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
L+ ++PG Y+ + +L+ +ET+G G +E+L++
Sbjct: 260 ELVGFVEPGAYKLLSDLIGSETKGAGRIEVLDM 292
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/74 (68%), Positives = 61/74 (82%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I TP+NQI++TNV++VR+KK KRFEIACYKNKV+ WRN IEK++DEVLQ VF NVSK
Sbjct: 5 IKTPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRNGIEKNLDEVLQIPNVFVNVSK 64
Query: 64 GQAANKEDLKKAFN 77
G+ A KEDL KAF
Sbjct: 65 GETAKKEDLAKAFG 78
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 30/102 (29%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI---- 431
LE+LN E+ GE+ER++Q+E +I IV+ K ++ +TK+ +T MIE L +
Sbjct: 88 LEILNKGELQVGEKERAAQLERVHNEIVDIVAGKLVDPKTKKVYTTGMIEKALDMVSAAG 147
Query: 432 ----------------------HF----SVNVNKNSKQQALE 447
H VN KN+K QALE
Sbjct: 148 SQERQEKNAAGAEAPAEGEEKKHLPTWTGVNATKNAKSQALE 189
>gi|50556908|ref|XP_505862.1| YALI0F25267p [Yarrowia lipolytica]
gi|49651732|emb|CAG78673.1| YALI0F25267p [Yarrowia lipolytica CLIB122]
Length = 244
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 163/296 (55%), Gaps = 63/296 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P+ QI++TNVA+VR+KK KRFEIACY+NKV WR +E D+DEVLQ VF N
Sbjct: 1 MAGIQQPSGQIKLTNVALVRLKKGRKRFEIACYQNKVQDWRKGVETDLDEVLQIPQVFVN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
V KGQ A ++D+K AF HT
Sbjct: 61 VGKGQTAPRDDMKAAFG-----------------------HT------------------ 79
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFK-DIATIVSEKCINTETKRPFTVSM 271
DQ +I IL GELQ+ +KER Q NQ + +I +VS+KC+N++TKRP+T +M
Sbjct: 80 -----DQDKIILEILNTGELQLGEKERQQQ-SNQLQTEIIQLVSQKCVNSKTKRPYTATM 133
Query: 272 IEAGL-KQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKK-- 326
IE L ++ F++ K++K QA++ I L KQ + I RA+MR+RV DVKK
Sbjct: 134 IEKALIGELKFNIVPKKSAKIQAMDAIKLLVEKQIIPIARARMRIRV-----TGDVKKLG 188
Query: 327 LKEKL-VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
L EKL +VE E L+C IDPG++R ++E V E +G+ +E++ +
Sbjct: 189 LGEKLKTDMGATVEEETHDE----LVCSIDPGQFRPVNEFVLAEVKGKCKVEVMEV 240
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P+ QI++TNVA+VR+KK KRFEIACY+NKV WR +E D+DEVLQ VF N
Sbjct: 1 MAGIQQPSGQIKLTNVALVRLKKGRKRFEIACYQNKVQDWRKGVETDLDEVLQIPQVFVN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
V KGQ A ++D+K AF DQ +I IL
Sbjct: 61 VGKGQTAPRDDMKAAFGHTDQDKIILEIL 89
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 52/74 (70%), Gaps = 3/74 (4%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFK-DIATIVSEKCINTETKRPFTVSMIEAGL-KQIHF 433
LE+LN E+ GE+ER Q NQ + +I +VS+KC+N++TKRP+T +MIE L ++ F
Sbjct: 86 LEILNTGELQLGEKERQQQ-SNQLQTEIIQLVSQKCVNSKTKRPYTATMIEKALIGELKF 144
Query: 434 SVNVNKNSKQQALE 447
++ K++K QA++
Sbjct: 145 NIVPKKSAKIQAMD 158
>gi|241954434|ref|XP_002419938.1| 60S ribosome maturation factor, putative; upf0023 protein ylr022c
[Candida dubliniensis CD36]
gi|223643279|emb|CAX42153.1| 60S ribosome maturation factor, putative [Candida dubliniensis
CD36]
Length = 257
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 55/302 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ VF NVSKGQ AN +DL+K
Sbjct: 46 -------------------------------KDIDEVLQIPQVFINVSKGQVANNDDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F T +Q EI IL KGE+Q+++KER++ ++ + + I+S KCIN +K+ + SMI
Sbjct: 75 CFGTTNQDEIIAEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F +N K +K QAL+ I L KQ + I RAQM+VR+ +S +K +++
Sbjct: 135 EKALNEVKFHLNPTKQTKIQALDAIKLLVEKQIIPIARAQMKVRITLSKKAY-LKSFQDE 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE------TRGQGTLELLNLKEV 384
+ + E+ +G ++ +IDP YR + L+ +G+G++E+L++ +
Sbjct: 194 IKPVIDQIVEEDNNGKQFEIVGIIDPINYRVLVTLIENTDGSNKVAKGEGSIEVLDMSAI 253
Query: 385 TE 386
E
Sbjct: 254 KE 255
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +EKDIDEVLQ VF N
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+K F T +Q EI IL K
Sbjct: 61 VSKGQVANNDDLQKCFGTTNQDEIIAEILNK 91
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER++ ++ + + I+S KCIN +K+ + SMIE L ++ F +N
Sbjct: 87 EILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMIEKALNEVKFHLN 146
Query: 437 VNKNSKQQALE 447
K +K QAL+
Sbjct: 147 PTKQTKIQALD 157
>gi|294659908|ref|XP_462345.2| DEHA2G18502p [Debaryomyces hansenii CBS767]
gi|199434326|emb|CAG90851.2| DEHA2G18502p [Debaryomyces hansenii CBS767]
Length = 254
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/300 (37%), Positives = 160/300 (53%), Gaps = 53/300 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPASQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ +VF NVSKGQ AN DL K
Sbjct: 46 -------------------------------KDLDEVLQIPSVFLNVSKGQVANNSDLLK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F D EI IL KGE+Q+++KERS+ ++ + + I+S KCIN ++K+ + SMI
Sbjct: 75 YFGKTDSNEIILEILEKGEIQLNEKERSANLQQKNNEFLNIISTKCINPKSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ L +I F +N NK +K QALE I L +Q I RAQM+V++ + K + +E
Sbjct: 135 QKALNEIKFHLNPNKPTKLQALEAIKLLIAEQLFPIARAQMKVKIVLENKAKK-QIFEEH 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLNLKEVTE 386
+ VE E IC+IDP YR I +L++ E +G+G++E+L++ + E
Sbjct: 194 ISPLIDKVEEENQETKFYECICIIDPVNYRTIVDLLQGENAKVKKGEGSIEVLDMAAIKE 253
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ +VF N
Sbjct: 1 MAVINQPASQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPSVFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN DL K F D EI IL K
Sbjct: 61 VSKGQVANNSDLLKYFGKTDSNEIILEILEK 91
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ E+ERS+ ++ + + I+S KCIN ++K+ + SMI+ L +I F +
Sbjct: 86 LEILEKGEIQLNEKERSANLQQKNNEFLNIISTKCINPKSKKRYPPSMIQKALNEIKFHL 145
Query: 436 NVNKNSKQQALE 447
N NK +K QALE
Sbjct: 146 NPNKPTKLQALE 157
>gi|409083314|gb|EKM83671.1| hypothetical protein AGABI1DRAFT_124002 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 248
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 155/284 (54%), Gaps = 50/284 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN+ D+VLQ VF NVSKG+ A DL+K F
Sbjct: 45 --------------TNL--------------DDVLQVANVFINVSKGEVAKANDLQKVFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T I IL KGE+Q+ +KER + + K+IAT+V+EKC++ T+ P+ V MIE
Sbjct: 77 TTKIDTIVSEILKKGEVQVGEKEREHDLTSLRKEIATLVAEKCVDPATQTPYPVGMIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVK 333
+ + FSV K +K Q E I ++ + I+RA+MR+RV V A D ++L++ +++
Sbjct: 137 MTEAGFSVKQGKTAKSQVSECIKLIQTESKLPIQRARMRIRVTVPAA--DAQRLRDNIIQ 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
VE+EE + + LI+P +R I+EL++ E + +G +E
Sbjct: 195 IGEKVEHEETNEQDWEVTMLIEPNAFRNINELLQKECKNRGRIE 238
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 62/88 (70%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV+IVR+KK GKRFEIACYKNKV WRN +E ++D+VLQ VF NVSK
Sbjct: 3 INQPSNQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRNGVETNLDDVLQVANVFINVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A DL+K F T I IL K
Sbjct: 63 GEVAKANDLQKVFGTTKIDTIVSEILKK 90
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE+ER + + K+IAT+V+EKC++ T+ P+ V MIE + + FSV
Sbjct: 86 EILKKGEVQVGEKEREHDLTSLRKEIATLVAEKCVDPATQTPYPVGMIEKAMTEAGFSVK 145
Query: 437 VNKNSKQQALE 447
K +K Q E
Sbjct: 146 QGKTAKSQVSE 156
>gi|406603842|emb|CCH44658.1| Ribosome maturation protein SBDS [Wickerhamomyces ciferrii]
Length = 247
Score = 177 bits (449), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 161/292 (55%), Gaps = 53/292 (18%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VRMKK KRFEIACY+NKV WR+N+E
Sbjct: 6 PSNQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSNVE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KDIDEVLQ VF NVSKGQ A EDL+K+F + D
Sbjct: 45 -------------------------KDIDEVLQIPQVFLNVSKGQVAPNEDLQKSFGSTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+I IL KGE+Q+S+KER ++ + ++S KCIN ++K+ + +MI+ L +
Sbjct: 80 TDKIILEILQKGEIQLSEKERQAKGNQIQAETLQLISTKCINPKSKKRYPPTMIQKALAE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ F+ K +K QALE I L KQ + I RA+M+++V + + KD KKL EK+
Sbjct: 140 LKFNTVTTKTAKLQALEAIKLLVAKQIIPIVRAKMKIKVLLES--KDAKKLNEKIKPLLG 197
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
+E+E+ SG ++ IDP YRE+ E+V GQ LE+L++ + E E
Sbjct: 198 DIESED-SGKFWEVVSYIDPVNYRELVEIVGNYKSGQ--LEVLDMAVIDESE 246
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VRMKK KRFEIACY+NKV WR+N+EKDIDEVLQ VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSNVEKDIDEVLQIPQVFLNVSKGQV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A EDL+K+F + D +I IL K
Sbjct: 66 APNEDLQKSFGSTDTDKIILEILQK 90
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ E+ER ++ + ++S KCIN ++K+ + +MI+ L ++ F+
Sbjct: 85 LEILQKGEIQLSEKERQAKGNQIQAETLQLISTKCINPKSKKRYPPTMIQKALAELKFNT 144
Query: 436 NVNKNSKQQALE 447
K +K QALE
Sbjct: 145 VTTKTAKLQALE 156
>gi|146417396|ref|XP_001484667.1| hypothetical protein PGUG_02396 [Meyerozyma guilliermondii ATCC
6260]
gi|146390140|gb|EDK38298.1| hypothetical protein PGUG_02396 [Meyerozyma guilliermondii ATCC
6260]
Length = 253
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 163/301 (54%), Gaps = 55/301 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR E
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRQKTE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VFTNVSKGQ AN +DLK
Sbjct: 46 -------------------------------KDLDEVLQIPQVFTNVSKGQIANNDDLKA 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + + EI IL KGE+Q+++KERS+ ++ + + I+S KCIN +K+ + SMI
Sbjct: 75 CFGSTNVDEIILEILDKGEIQLNEKERSANLQQKQNEFLNIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ L ++ + VN K +K QALE I L KQ I RAQM+V+V ++ VK K++ ++
Sbjct: 135 QKALNEVKYHVNPAKPTKIQALEAIKVLIEKQIFPIARAQMKVKVVLANKVK--KQVYDE 192
Query: 331 LVKCATS-VENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLNLKEVT 385
+K +E+E I +IDP YR I EL++ E +G+G++E++++ V
Sbjct: 193 HIKPLIDKIEDEHQDAKMFECIGIIDPFNYRAIVELLQGENAKVKQGEGSIEVIDMAAVK 252
Query: 386 E 386
E
Sbjct: 253 E 253
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR EKD+DEVLQ VFTN
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRQKTEKDLDEVLQIPQVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DLK F + + EI IL K
Sbjct: 61 VSKGQIANNDDLKACFGSTNVDEIILEILDK 91
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L+ E+ E+ERS+ ++ + + I+S KCIN +K+ + SMI+ L ++ + V
Sbjct: 86 LEILDKGEIQLNEKERSANLQQKQNEFLNIISTKCINPRSKKRYPPSMIQKALNEVKYHV 145
Query: 436 NVNKNSKQQALE 447
N K +K QALE
Sbjct: 146 NPAKPTKIQALE 157
>gi|68470904|ref|XP_720459.1| hypothetical protein CaO19.2708 [Candida albicans SC5314]
gi|68471362|ref|XP_720229.1| hypothetical protein CaO19.10223 [Candida albicans SC5314]
gi|46442087|gb|EAL01379.1| hypothetical protein CaO19.10223 [Candida albicans SC5314]
gi|46442328|gb|EAL01618.1| hypothetical protein CaO19.2708 [Candida albicans SC5314]
gi|238881558|gb|EEQ45196.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 255
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 163/302 (53%), Gaps = 55/302 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KDIDEVLQ VF NVSKGQ AN +DL+K
Sbjct: 46 -------------------------------KDIDEVLQIPQVFINVSKGQVANNDDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F T +Q EI IL KGE+Q+++KER++ ++ + + I+S KCIN +K+ + SMI
Sbjct: 75 CFGTTNQDEIIAEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F +N K +K QAL+ I L KQ + I RAQM+VR+ +S +K +++
Sbjct: 135 EKVLNEVKFHLNPTKPTKIQALDAIKLLVEKQIIPIARAQMKVRITLSKKAY-LKTFQDE 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE------TRGQGTLELLNLKEV 384
+ + E+ +G ++ +IDP YR + L+ +G+G++E+L++ +
Sbjct: 194 IKPVIDQIVEEDNNGKQYEIVGIIDPINYRVLVTLIENTDGSNKVAKGEGSIEVLDMSAI 253
Query: 385 TE 386
E
Sbjct: 254 KE 255
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QIR+TNV++VRMKK KRFEIACY+NKV WR+ +EKDIDEVLQ VF N
Sbjct: 1 MAVINQPNSQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDIDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+K F T +Q EI IL K
Sbjct: 61 VSKGQVANNDDLQKCFGTTNQDEIIAEILNK 91
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 44/71 (61%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER++ ++ + + I+S KCIN +K+ + SMIE L ++ F +N
Sbjct: 87 EILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMIEKVLNEVKFHLN 146
Query: 437 VNKNSKQQALE 447
K +K QAL+
Sbjct: 147 PTKPTKIQALD 157
>gi|363755124|ref|XP_003647777.1| hypothetical protein Ecym_7108 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891813|gb|AET40960.1| hypothetical protein Ecym_7108 [Eremothecium cymbalariae
DBVPG#7215]
Length = 283
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 176/323 (54%), Gaps = 58/323 (17%)
Query: 75 AFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRN 134
+FN+++ TE + M I P+ QI++TNV++VR+KK KRFE+ACY+NKV +RN
Sbjct: 14 SFNSKESTETPRT--GYSMGVINQPSGQIKLTNVSMVRLKKGKKRFEVACYQNKVQDYRN 71
Query: 135 NIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHT 194
+E KD+DEVLQ +
Sbjct: 72 GVE----------------------------------------------KDLDEVLQINQ 85
Query: 195 VFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIV 254
VF NVSKGQ A+K DL AF T DQT I IL +GE+ +S+KER +E +I T+V
Sbjct: 86 VFLNVSKGQVASKGDLTSAFGTSDQTAIIAEILNRGEIPLSEKERQLMLEKLTNEILTMV 145
Query: 255 SEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMR 312
S KCIN ++K+ + +MI L ++ F + VNK +K QALE I L KQ + I RA+M+
Sbjct: 146 SAKCINPKSKKRYPPTMINKALTELKFGIVVNKPAKLQALEAIKVLVSKQLIPIVRAKMK 205
Query: 313 VRVEV-SAGVKDV--KKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE 369
V+V + S G +D+ + K LV A + +++E SG I LIDP YREI L
Sbjct: 206 VKVAITSQGNEDIIDRLTKLILVTDAAATQSDE-SGTAWTRIGLIDPVCYREILSL---- 260
Query: 370 TRGQGTLELLNLKEVTEGEEERS 392
+GT+++L++ V + +++ S
Sbjct: 261 CNDKGTVQVLDMAVVDDLKDQNS 283
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+ QI++TNV++VR+KK KRFE+ACY+NKV +RN +EKD+DEVLQ + VF N
Sbjct: 30 MGVINQPSGQIKLTNVSMVRLKKGKKRFEVACYQNKVQDYRNGVEKDLDEVLQINQVFLN 89
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
VSKGQ A+K DL AF T DQT I IL
Sbjct: 90 VSKGQVASKGDLTSAFGTSDQTAIIAEIL 118
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER +E +I T+VS KCIN ++K+ + +MI L ++ F +
Sbjct: 116 EILNRGEIPLSEKERQLMLEKLTNEILTMVSAKCINPKSKKRYPPTMINKALTELKFGIV 175
Query: 437 VNKNSKQQALE 447
VNK +K QALE
Sbjct: 176 VNKPAKLQALE 186
>gi|209876578|ref|XP_002139731.1| ribosome maturation protein SBDS [Cryptosporidium muris RN66]
gi|209555337|gb|EEA05382.1| ribosome maturation protein SBDS, putative [Cryptosporidium muris
RN66]
Length = 373
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 168/309 (54%), Gaps = 62/309 (20%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P++QIR+TNVAIVR K GKRFE+ACYKNK+++WR+ +E
Sbjct: 3 LFQPSSQIRLTNVAIVRYKTHGKRFEVACYKNKILNWRSGVEW----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEVLQ H++FTNVSKG A+ +DL K F
Sbjct: 46 -----------------------------DLDEVLQIHSIFTNVSKGHLASTDDLIKVFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T + IC++IL KGE+Q+S+ ERS +E Q+ DI ++SE +N P TV M+E
Sbjct: 77 TVNIESICRVILRKGEVQVSEAERSYMMEKQYLDICNLLSEMTVNPSNNLPLTVKMLETE 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKDVKKLKEKLVK 333
L++ FSV++NK++K+QAL+ LK+ + I RA+M +R + D + EKL +
Sbjct: 137 LREAGFSVSLNKSTKEQALKAFDILKKRIPNQISRAKMLLR--FISDFSDKNFIFEKLEE 194
Query: 334 CATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL--NLKEVTEGEEE- 390
+ N + S L + L DP YR ID+L G L +L N+K++T+ + +
Sbjct: 195 FNATDINIDESNDKLSVTFLCDPYHYRSIDKL-------PGKLLVLNNNVKKITKDKSQC 247
Query: 391 --RSSQIEN 397
+S+I+N
Sbjct: 248 KVETSKIDN 256
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 70/88 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P++QIR+TNVAIVR K GKRFE+ACYKNK+++WR+ +E D+DEVLQ H++FTNVSK
Sbjct: 3 LFQPSSQIRLTNVAIVRYKTHGKRFEVACYKNKILNWRSGVEWDLDEVLQIHSIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G A+ +DL K F T + IC++IL K
Sbjct: 63 GHLASTDDLIKVFGTVNIESICRVILRK 90
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 383 EVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSK 442
EV E ERS +E Q+ DI ++SE +N P TV M+E L++ FSV++NK++K
Sbjct: 92 EVQVSEAERSYMMEKQYLDICNLLSEMTVNPSNNLPLTVKMLETELREAGFSVSLNKSTK 151
Query: 443 QQAL 446
+QAL
Sbjct: 152 EQAL 155
>gi|354547540|emb|CCE44275.1| hypothetical protein CPAR2_400760 [Candida parapsilosis]
Length = 250
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 164/293 (55%), Gaps = 52/293 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ AN +DL+
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQVANNDDLQA 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNT +Q I + IL KGE+Q+++KER++ ++ + + TI+S KCIN +K+ + SMI
Sbjct: 75 AFNTTNQDAIIQEILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F +N K +K QAL+ I L KQ + I RAQM++R+ ++ K +K E+
Sbjct: 135 EKALNELKFHLNPTKTTKTQALDAIKLLVEKQIIPIARAQMKIRILLTK--KGYQKTYEE 192
Query: 331 LVKCATSVENE-EWSGGGLLLICLIDPGKYRE-IDELVRTETRGQGTLELLNL 381
+K +E E +G ++ +IDP Y+ +D L + + +G++E+L++
Sbjct: 193 EIKPKIDHLDELENNGKQYEIVGIIDPINYKALVDLLEGKDLKNEGSIEVLDM 245
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+ AFNT +Q I + IL K
Sbjct: 61 VSKGQVANNDDLQAAFNTTNQDAIIQEILNK 91
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER++ ++ + + TI+S KCIN +K+ + SMIE L ++ F +N
Sbjct: 87 EILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRYPPSMIEKALNELKFHLN 146
Query: 437 VNKNSKQQALE 447
K +K QAL+
Sbjct: 147 PTKTTKTQALD 157
>gi|195086720|ref|XP_001997433.1| GH17974 [Drosophila grimshawi]
gi|193891600|gb|EDV90466.1| GH17974 [Drosophila grimshawi]
Length = 138
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/171 (53%), Positives = 108/171 (63%), Gaps = 46/171 (26%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTIFTN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VSKGQAA K++L+KA
Sbjct: 61 VSKGQAAKKDELQKA--------------------------------------------- 75
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTET 263
F +D+TEICK IL KGELQ+S+KER S +++Q I V+ C+N ET
Sbjct: 76 -FGAKDETEICKEILSKGELQVSEKERQSVLDSQLNSIVNGVAALCVNPET 125
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 85/91 (93%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MSKIFTPTNQIR+TNVAIVR+KKAGKRFEIACYKNKV+SWRNN EKDIDEVLQTHT+FTN
Sbjct: 1 MSKIFTPTNQIRLTNVAIVRLKKAGKRFEIACYKNKVLSWRNNSEKDIDEVLQTHTIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQAA K++L+KAF +D+TEICK IL K
Sbjct: 61 VSKGQAAKKDELQKAFGAKDETEICKEILSK 91
>gi|50311507|ref|XP_455778.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644914|emb|CAG98486.1| KLLA0F15532p [Kluyveromyces lactis]
Length = 247
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 165/301 (54%), Gaps = 61/301 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P+ QI++TNV++V++KKA KRFE+ACY+NKV +RN +E
Sbjct: 1 MAVINQPSGQIKLTNVSMVKLKKAKKRFEVACYQNKVQDYRNGVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ + VF NVSKGQ A+KEDL+K
Sbjct: 46 -------------------------------KDLDEVLQINQVFINVSKGQVASKEDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T D I K IL KGE+Q+S+KER Q+ ++ TI+S KCIN ++K+ + +MI
Sbjct: 75 AFQTTDVDAIIKEILFKGEIQLSEKERQLQLNKINNEMLTIISAKCINPKSKKRYPPTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEV---SAGVKDVKKL 327
L ++ F+V VNK +K QALE I L KQ + I R++M+++V V +AG ++ +
Sbjct: 135 HKALLELKFNVVVNKAAKLQALEAIKLLIAKQIIPIARSKMKIKVAVNLETAGSSELIEQ 194
Query: 328 KEKLVKCATSVENE-EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
L++ + + E W+ G LIDP YRE+ + + TL++L++ + E
Sbjct: 195 LNTLIRSGQTSQTETAWTSIG-----LIDPVAYRELVNICNQ----KATLQVLDMAVIEE 245
Query: 387 G 387
Sbjct: 246 S 246
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 71/91 (78%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P+ QI++TNV++V++KKA KRFE+ACY+NKV +RN +EKD+DEVLQ + VF N
Sbjct: 1 MAVINQPSGQIKLTNVSMVKLKKAKKRFEVACYQNKVQDYRNGVEKDLDEVLQINQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A+KEDL+KAF T D I K IL K
Sbjct: 61 VSKGQVASKEDLQKAFQTTDVDAIIKEILFK 91
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER Q+ ++ TI+S KCIN ++K+ + +MI L ++ F+V
Sbjct: 87 EILFKGEIQLSEKERQLQLNKINNEMLTIISAKCINPKSKKRYPPTMIHKALLELKFNVV 146
Query: 437 VNKNSKQQALEEDK 450
VNK +K QALE K
Sbjct: 147 VNKAAKLQALEAIK 160
>gi|448529228|ref|XP_003869803.1| Sdo1 protein [Candida orthopsilosis Co 90-125]
gi|380354157|emb|CCG23670.1| Sdo1 protein [Candida orthopsilosis]
Length = 250
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 164/293 (55%), Gaps = 52/293 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ AN +DL+
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQVANNDDLQA 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNT +Q I + IL KGE+Q+++KER++ ++ + + TI+S KCIN +K+ + SMI
Sbjct: 75 AFNTTNQDTIIQEILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F +N K +K QAL+ I L KQ + I RAQM++R+ ++ K +K E
Sbjct: 135 EKALNELKFHLNPTKTTKTQALDAIKLLVEKQIIPIARAQMKIRILLTK--KGYQKAYED 192
Query: 331 LVKCATSVENE-EWSGGGLLLICLIDPGKYREIDELVR-TETRGQGTLELLNL 381
+K +E E +G ++ +IDP Y+ + +L+ + + +G++E+L++
Sbjct: 193 EIKPKIDHLDELENNGKQYEIMGIIDPINYKALVDLLECKDLKNEGSIEVLDM 245
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+ AFNT +Q I + IL K
Sbjct: 61 VSKGQVANNDDLQAAFNTTNQDTIIQEILNK 91
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 370 TRGQGTL--ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 427
T Q T+ E+LN E+ E+ER++ ++ + + TI+S KCIN +K+ + SMIE
Sbjct: 78 TTNQDTIIQEILNKGEIQLNEKERNANLQQKQNEFLTIISTKCINPRSKKRYPPSMIEKA 137
Query: 428 LKQIHFSVNVNKNSKQQALE 447
L ++ F +N K +K QAL+
Sbjct: 138 LNELKFHLNPTKTTKTQALD 157
>gi|393218954|gb|EJD04442.1| Shwachman-Bodian-diamond syndrome protein [Fomitiporia mediterranea
MF3/22]
Length = 250
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 151/280 (53%), Gaps = 59/280 (21%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK GKRFE+ACYKNKV WR +E
Sbjct: 3 INQPSNQIKLTNVSVVRLKKGGKRFEVACYKNKVQEWRKGVE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
TN+ D+VLQ VF NVSKG+ A DLKKAF
Sbjct: 45 --------------TNL--------------DDVLQISAVFVNVSKGEQAKAGDLKKAFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+ +I K IL G+LQ+ +KER ++ N KDIA VSE ++ T+RP+++ +IE
Sbjct: 77 KASEDDIIKEILKHGDLQVGEKEREHELTNLRKDIAHRVSESVVDPSTQRPYSLGIIEKA 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQC-MSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
L ++ FSV+ +KN+K Q L I L+ + ++RA+MRVR+ + A DV+KL+ ++ +
Sbjct: 137 LSEVGFSVDPSKNAKSQVLGAIKLLQGGRLPVQRARMRVRLTIPAA--DVEKLEARIREG 194
Query: 335 ATSVE-----NEEWSGGGLLLICLIDPGKYREIDELVRTE 369
A VE NE W + IDP ++R EL+ E
Sbjct: 195 AEVVEDTEERNELWE-----VTLQIDPAQFRVYKELLDKE 229
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 63/86 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK GKRFE+ACYKNKV WR +E ++D+VLQ VF NVSK
Sbjct: 3 INQPSNQIKLTNVSVVRLKKGGKRFEVACYKNKVQEWRKGVETNLDDVLQISAVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
G+ A DLKKAF + +I K IL
Sbjct: 63 GEQAKAGDLKKAFGKASEDDIIKEIL 88
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L ++ GE+ER ++ N KDIA VSE ++ T+RP+++ +IE L ++ FSV+
Sbjct: 86 EILKHGDLQVGEKEREHELTNLRKDIAHRVSESVVDPSTQRPYSLGIIEKALSEVGFSVD 145
Query: 437 VNKNSKQQAL 446
+KN+K Q L
Sbjct: 146 PSKNAKSQVL 155
>gi|395536236|ref|XP_003770126.1| PREDICTED: ribosome maturation protein SBDS [Sarcophilus harrisii]
Length = 206
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/164 (57%), Positives = 129/164 (78%), Gaps = 3/164 (1%)
Query: 226 ILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 285
IL KGE+Q+SDKER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 43 ILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKP 102
Query: 286 NKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG 345
NK++KQQALEVI LK+ M IERA MR+R + V++ KKLKEKL +E+E++ G
Sbjct: 103 NKSTKQQALEVIKQLKENMKIERAHMRLRFILP--VREGKKLKEKLKPLIKVIESEDF-G 159
Query: 346 GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
L ++CLIDPG +REIDEL++ ET+G+G+LE+L+LK+V EG+E
Sbjct: 160 EQLEIVCLIDPGCFREIDELIQRETKGKGSLEVLSLKDVEEGDE 203
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 54/70 (77%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 43 ILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKP 102
Query: 438 NKNSKQQALE 447
NK++KQQALE
Sbjct: 103 NKSTKQQALE 112
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNI 44
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ I
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGI 43
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/41 (82%), Positives = 39/41 (95%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNI 136
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ I
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGI 43
>gi|313225184|emb|CBY20978.1| unnamed protein product [Oikopleura dioica]
Length = 253
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 164/300 (54%), Gaps = 51/300 (17%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I PTNQ R TNVA+V++K GKRFE+ACYKNKV SWR+ EKDI EVLQ+ +FTN
Sbjct: 1 MPVIKAPTNQKRHTNVAVVKLKTHGKRFELACYKNKVQSWRDGTEKDIGEVLQSDRIFTN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
V KG+ AN +DL+KAF T EKD
Sbjct: 61 VGKGEFANTKDLEKAFGTK----------NEKD--------------------------- 83
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
I IL KG+LQ+SDKER E +IA VSE +N +T+R + ++I
Sbjct: 84 ---------IAMKILAKGDLQVSDKERGVANEALLSEIAEKVSEMSVNPQTERKYPSTII 134
Query: 273 EAGLKQ-IHFSVNVNKNSKQQALEVIPTLK-QCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
+ +K+ IH+S+ KN+K QA++VI LK + I+R + +V+ + + V EK
Sbjct: 135 QKAMKETIHYSLQTKKNAKVQAIDVIKQLKAKDFPIDRCKSQVKANIPSEFSGV---AEK 191
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEE 390
+ K A+ + +E+ + +LL +I P + +EI ++ ET G+ ++EL++L + +E+
Sbjct: 192 IRKLASKIIDEKEADDHILLNIMIMPHQLKEIQQIFVKETAGKASVELISLNKQKSSDEQ 251
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I PTNQ R TNVA+V++K GKRFE+ACYKNKV SWR+ EKDI EVLQ+ +FTN
Sbjct: 1 MPVIKAPTNQKRHTNVAVVKLKTHGKRFELACYKNKVQSWRDGTEKDIGEVLQSDRIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
V KG+ AN +DL+KAF T+++ +I IL K
Sbjct: 61 VGKGEFANTKDLEKAFGTKNEKDIAMKILAK 91
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 375 TLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ-IHF 433
+++L ++ ++ER E +IA VSE +N +T+R + ++I+ +K+ IH+
Sbjct: 85 AMKILAKGDLQVSDKERGVANEALLSEIAEKVSEMSVNPQTERKYPSTIIQKAMKETIHY 144
Query: 434 SVNVNKNSKQQALE 447
S+ KN+K QA++
Sbjct: 145 SLQTKKNAKVQAID 158
>gi|255721091|ref|XP_002545480.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135969|gb|EER35522.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 255
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/302 (34%), Positives = 163/302 (53%), Gaps = 55/302 (18%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +E
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+DEVLQ VF NVSKGQ AN +DL+K
Sbjct: 46 -------------------------------KDLDEVLQIPQVFINVSKGQVANNDDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+F T +Q EI IL KGE+Q+++KER++ ++ + + I+S KCIN +K+ + SMI
Sbjct: 75 SFGTTNQDEIILEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L ++ F ++ K +K QAL+ I L KQ + I RAQM++R+ +S +K ++
Sbjct: 135 EKVLNELKFHLSPTKPTKTQALDAIKLLVEKQIIPIARAQMKIRIMLSKKAY-LKTFQDD 193
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE------TRGQGTLELLNLKEV 384
+ + E+ +G ++ +IDP YR + L+ +G+G++E+L++ +
Sbjct: 194 IKPNIDQIVEEDNNGKQYEIVGIIDPINYRVLVGLIDNSDGSNKVPKGEGSIEVLDMSAI 253
Query: 385 TE 386
E
Sbjct: 254 KE 255
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P +QI++TNV++VRMKK KRFEIACY+NKV WR+ +EKD+DEVLQ VF N
Sbjct: 1 MAVINQPNSQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRSKVEKDLDEVLQIPQVFIN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ AN +DL+K+F T +Q EI IL K
Sbjct: 61 VSKGQVANNDDLQKSFGTTNQDEIILEILNK 91
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+LN E+ E+ER++ ++ + + I+S KCIN +K+ + SMIE L ++ F +
Sbjct: 86 LEILNKGEIQLNEKERNANLQQKQNEFLNIISTKCINPRSKKRYPPSMIEKVLNELKFHL 145
Query: 436 NVNKNSKQQALE 447
+ K +K QAL+
Sbjct: 146 SPTKPTKTQALD 157
>gi|255076297|ref|XP_002501823.1| predicted protein [Micromonas sp. RCC299]
gi|226517087|gb|ACO63081.1| predicted protein [Micromonas sp. RCC299]
Length = 181
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 124/225 (55%), Gaps = 46/225 (20%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ PT ++TN+A+VR+KK G RFEIACYKN V +WR+ E
Sbjct: 3 TQLALPTGIKKLTNIAVVRLKKHGVRFEIACYKNTVGAWRDGFE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KDID VLQT ++ NVSKG A +EDL KA
Sbjct: 47 ------------------------------KDIDNVLQTTQIYNNVSKGIFAKEEDLLKA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F + D+ + KLIL GE+Q+SDKER + +N F+D ++ +KC+N ET RP+ MIE
Sbjct: 77 FGSADEKVVAKLILETGEVQVSDKERKNTFDNIFRDAVNVLVDKCVNPETNRPYPPGMIE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVS 318
L+++HF V+ K++KQQAL +P L++ I+RA MR R V
Sbjct: 137 RALREVHFQVDPTKSAKQQALAALPRLQKVFPIKRAAMRFRFTVP 181
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 64/88 (72%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ PT ++TN+A+VR+KK G RFEIACYKN V +WR+ EKDID VLQT ++ NV
Sbjct: 3 TQLALPTGIKKLTNIAVVRLKKHGVRFEIACYKNTVGAWRDGFEKDIDNVLQTTQIYNNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLIL 89
SKG A +EDL KAF + D+ + KLIL
Sbjct: 63 SKGIFAKEEDLLKAFGSADEKVVAKLIL 90
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L EV ++ER + +N F+D ++ +KC+N ET RP+ MIE L+++HF V+
Sbjct: 89 ILETGEVQVSDKERKNTFDNIFRDAVNVLVDKCVNPETNRPYPPGMIERALREVHFQVDP 148
Query: 438 NKNSKQQAL 446
K++KQQAL
Sbjct: 149 TKSAKQQAL 157
>gi|303279803|ref|XP_003059194.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459030|gb|EEH56326.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 197
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 126/229 (55%), Gaps = 47/229 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
++++ PT ++TN+A+VR+KK G RFEIACYKN V +WR+ E
Sbjct: 7 ITQLALPTGIKKLTNIAVVRLKKHGVRFEIACYKNTVAAWRDKFE--------------- 51
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KD+D+V+QT ++ NVSKG A +EDL +
Sbjct: 52 -------------------------------KDMDDVVQTTQIYNNVSKGVLAKEEDLMR 80
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T D+ IC++IL GE+Q+SDKER + F+D+ ++ +KC+N ET RP+ MI
Sbjct: 81 AFGTTDEKTICRVILDVGEMQVSDKERKLNFDTLFRDVVNVLVDKCVNPETNRPYPPGMI 140
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRV-RVEVSAG 320
E L+ +HFSV+ K++KQQAL +P L I+RA MR RV + G
Sbjct: 141 ERALRDVHFSVDPMKSAKQQALAALPKLGAVFPIKRAAMRFRRVRIYTG 189
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 67/89 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
++++ PT ++TN+A+VR+KK G RFEIACYKN V +WR+ EKD+D+V+QT ++ N
Sbjct: 7 ITQLALPTGIKKLTNIAVVRLKKHGVRFEIACYKNTVAAWRDKFEKDMDDVVQTTQIYNN 66
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
VSKG A +EDL +AF T D+ IC++IL
Sbjct: 67 VSKGVLAKEEDLMRAFGTTDEKTICRVIL 95
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L++ E+ ++ER + F+D+ ++ +KC+N ET RP+ MIE L+ +HFSV+
Sbjct: 94 ILDVGEMQVSDKERKLNFDTLFRDVVNVLVDKCVNPETNRPYPPGMIERALRDVHFSVDP 153
Query: 438 NKNSKQQALEE-DKTSGIYSSLYKACKF 464
K++KQQAL K ++ A +F
Sbjct: 154 MKSAKQQALAALPKLGAVFPIKRAAMRF 181
>gi|444318533|ref|XP_004179924.1| hypothetical protein TBLA_0C06080 [Tetrapisispora blattae CBS 6284]
gi|387512965|emb|CCH60405.1| hypothetical protein TBLA_0C06080 [Tetrapisispora blattae CBS 6284]
Length = 247
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 156/299 (52%), Gaps = 65/299 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR++K KRFEIACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLRKNKKRFEIACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KDIDEVLQ H VF NVSKGQAA K+DL K FNT D
Sbjct: 45 -------------------------KDIDEVLQIHQVFLNVSKGQAAPKDDLLKCFNTAD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
EI IL KGE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L Q
Sbjct: 80 MDEIIMEILKKGEIQLSEKERQLMLTKINNEMLTIISAKCINPNSKKRYPPTMIHKALMQ 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRV-----EVSAGVKDVKKLKEKL 331
+ FS VNK +K QALE I L KQ + I RA+MR++V ++S D+ KL E L
Sbjct: 140 LKFSPVVNKPAKLQALEAIKLLINKQVIPIVRAKMRIKVVNNNSQLSGD--DISKL-ENL 196
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEE 390
E+ W G L+DP YR++ T G+ L++L++ + + +++
Sbjct: 197 FLTKNITEDPAWVCTG-----LVDPVSYRDL----VTLCEGKSILQVLDMAVIDDSDDK 246
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/102 (55%), Positives = 72/102 (70%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR++K KRFEIACY+NKV +R IEKDIDEVLQ H VF NVSKGQA
Sbjct: 6 PSGQIKLTNVSLVRLRKNKKRFEIACYQNKVQDYRKGIEKDIDEVLQIHQVFLNVSKGQA 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNV 108
A K+DL K FNT D EI IL K ++ Q+ +T +
Sbjct: 66 APKDDLLKCFNTADMDEIIMEILKKGEIQLSEKERQLMLTKI 107
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 357 GKYREIDELVR---TETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
G+ D+L++ T + +E+L E+ E+ER + ++ TI+S KCIN
Sbjct: 63 GQAAPKDDLLKCFNTADMDEIIMEILKKGEIQLSEKERQLMLTKINNEMLTIISAKCINP 122
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
+K+ + +MI L Q+ FS VNK +K QALE
Sbjct: 123 NSKKRYPPTMIHKALMQLKFSPVVNKPAKLQALE 156
>gi|67624481|ref|XP_668523.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54659718|gb|EAL38283.1| hypothetical protein Chro.80384 [Cryptosporidium hominis]
Length = 373
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 148/274 (54%), Gaps = 54/274 (19%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P+NQI++TNVA+VR K GKRFE+ACYKNK+++WR+ +E
Sbjct: 3 LFQPSNQIKLTNVAVVRYKSHGKRFEVACYKNKILNWRSGVEW----------------- 45
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEVLQ T+F NVSKGQ AN +DL F
Sbjct: 46 -----------------------------DLDEVLQIRTIFANVSKGQVANSDDLNTVFG 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T ICK IL KGE+Q+S+ ERS ++ QF DI +++ +N + P +V +IE+
Sbjct: 77 TNSIDNICKTILSKGEIQVSETERSYMLDKQFTDICHMLNRMTVNPKNNLPLSVKIIESE 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKD--VKKLKEKL 331
LK FSV++NK +K+QAL+ LK+ + IERA+M +++ V K KKL E
Sbjct: 137 LKDSGFSVSLNKTTKEQALKAFDILKKRIPDQIERAKMMLKLSVDIVNKQNITKKLNEFN 196
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
V +S E+ + + +C +P YREID+L
Sbjct: 197 VFPISS--EEKHNTYSITFLC--EPRYYREIDQL 226
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P+NQI++TNVA+VR K GKRFE+ACYKNK+++WR+ +E D+DEVLQ T+F NVSK
Sbjct: 3 LFQPSNQIKLTNVAVVRYKSHGKRFEVACYKNKILNWRSGVEWDLDEVLQIRTIFANVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ AN +DL F T ICK IL K
Sbjct: 63 GQVANSDDLNTVFGTNSIDNICKTILSK 90
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ E ERS ++ QF DI +++ +N + P +V +IE+ LK FSV++
Sbjct: 87 ILSKGEIQVSETERSYMLDKQFTDICHMLNRMTVNPKNNLPLSVKIIESELKDSGFSVSL 146
Query: 438 NKNSKQQAL 446
NK +K+QAL
Sbjct: 147 NKTTKEQAL 155
>gi|412993092|emb|CCO16625.1| predicted protein [Bathycoccus prasinos]
Length = 408
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 162/324 (50%), Gaps = 67/324 (20%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++ P ++TNVA+VR K G RFEIACYKN V+S+R
Sbjct: 3 GRLSIPVGIKKLTNVAVVRYKTHGIRFEIACYKNTVVSFRAGA----------------- 45
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
EKD+D VLQT ++ NVSKG A + DLKKA
Sbjct: 46 -----------------------------EKDVDNVLQTTAIYLNVSKGIVAKEADLKKA 76
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T D+ +IC++IL KGELQ+ +KER E+ +D I+ EK IN ET RP+ MIE
Sbjct: 77 FGTTDEEKICRVILEKGELQVGEKEREVGQESVTRDCVNILVEKTINPETNRPYPHGMIE 136
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKK------- 326
+ LK+ HFSV+ K++KQQAL +IP L + I+RA MR + V+A ++ K
Sbjct: 137 SALKECHFSVDPTKSAKQQALAMIPKLAKLFPIKRAPMRFKFTVAAESEEEAKIREEEML 196
Query: 327 --LKEKLVKCATSVENEEWSGGG------LLLICLIDPGKYREIDELVRTETRGQGTLEL 378
LKE T+ +EE S ++C I+ YR D + ++G L++
Sbjct: 197 NFLKEHEANVETNSLSEEKSDDSNNSKFTRTIVCTIESSMYRPCDAYAKA-SKGSVRLDV 255
Query: 379 LNLKEVTEGEEERS----SQIENQ 398
L+L VT E RS S ++NQ
Sbjct: 256 LSLS-VTAEAESRSAFDESSLQNQ 278
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++ P ++TNVA+VR K G RFEIACYKN V+S+R EKD+D VLQT ++ NV
Sbjct: 3 GRLSIPVGIKKLTNVAVVRYKTHGIRFEIACYKNTVVSFRAGAEKDVDNVLQTTAIYLNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKG A + DLKKAF T D+ +IC++IL K
Sbjct: 63 SKGIVAKEADLKKAFGTTDEEKICRVILEK 92
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ GE+ER E+ +D I+ EK IN ET RP+ MIE+ LK+ HFSV+
Sbjct: 89 ILEKGELQVGEKEREVGQESVTRDCVNILVEKTINPETNRPYPHGMIESALKECHFSVDP 148
Query: 438 NKNSKQQAL 446
K++KQQAL
Sbjct: 149 TKSAKQQAL 157
>gi|254578840|ref|XP_002495406.1| ZYRO0B10516p [Zygosaccharomyces rouxii]
gi|238938296|emb|CAR26473.1| ZYRO0B10516p [Zygosaccharomyces rouxii]
Length = 243
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 149/271 (54%), Gaps = 55/271 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+K+ KRFEIACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLKRERKRFEIACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD++EVLQ H VFTNVSKG ANKEDL+K F T D
Sbjct: 45 -------------------------KDLEEVLQVHQVFTNVSKGDTANKEDLQKCFGTTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
Q I K IL KGE+Q+S+KER +I ++ TI+S KCIN ++K+ + SMI L +
Sbjct: 80 QDSIIKEILAKGEIQLSEKERQLEINKINNEMLTIISAKCINPKSKKRYPPSMIHKALVE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKD-VKKLKEKLVKC- 334
+ FS +NK +K QALE I L Q + I RA+M+V+V ++A + +++LK +
Sbjct: 140 LKFSPVLNKPAKLQALEAIKVLTRTQLIPITRARMKVKVTMNANKPETIEQLKNHVKGTE 199
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
TS + + WS G LIDP YRE+ L
Sbjct: 200 ETSSDAQIWSMTG-----LIDPVSYRELVSL 225
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 54/85 (63%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+K+ KRFEIACY+NKV +R IEKD++EVLQ H VFTNVSKG
Sbjct: 6 PSGQIKLTNVSLVRLKRERKRFEIACYQNKVQDYRKGIEKDLEEVLQVHQVFTNVSKGDT 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T DQ I K IL K
Sbjct: 66 ANKEDLQKCFGTTDQDSIIKEILAK 90
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER +I ++ TI+S KCIN ++K+ + SMI L ++ FS
Sbjct: 86 EILAKGEIQLSEKERQLEINKINNEMLTIISAKCINPKSKKRYPPSMIHKALVELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 LNKPAKLQALE 156
>gi|66360252|ref|XP_627226.1| S. cerevisiae Ylr022cp like protein that has a C2H2 zinc finger and
is a component of the exosome [Cryptosporidium parvum
Iowa II]
gi|46228838|gb|EAK89708.1| Ylr022cp-like protein that has a C2H2 zinc finger and is a
component of the exosome [Cryptosporidium parvum Iowa
II]
Length = 379
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 148/274 (54%), Gaps = 54/274 (19%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P+NQI++TNVA+VR K GKRFE+ACYKNK+++WR+ +E
Sbjct: 9 LFQPSNQIKLTNVAVVRYKSHGKRFEVACYKNKILNWRSGVEW----------------- 51
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
D+DEVLQ T+F NVSKGQ AN +DL F
Sbjct: 52 -----------------------------DLDEVLQIRTIFANVSKGQLANSDDLNTVFG 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
T ICK IL KGE+QIS+ ERS ++ QF DI +++ +N + P +V +IE+
Sbjct: 83 TNSIDNICKTILSKGEIQISETERSYMLDKQFTDICHMLNRMTVNPKNNLPLSVKIIESE 142
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKD--VKKLKEKL 331
LK FSV++NK +K+QAL+ LK+ + IERA+M +++ V K KKL E
Sbjct: 143 LKDSGFSVSLNKTTKEQALKAFDILKKRIPDQIERAKMMLKLSVDIVNKQNITKKLNEFN 202
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
V +S E+ + + +C +P YREID+L
Sbjct: 203 VFPISS--EEKHNTYTITFLC--EPRYYREIDQL 232
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P+NQI++TNVA+VR K GKRFE+ACYKNK+++WR+ +E D+DEVLQ T+F NVSK
Sbjct: 9 LFQPSNQIKLTNVAVVRYKSHGKRFEVACYKNKILNWRSGVEWDLDEVLQIRTIFANVSK 68
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ AN +DL F T ICK IL K
Sbjct: 69 GQLANSDDLNTVFGTNSIDNICKTILSK 96
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 43/69 (62%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ E ERS ++ QF DI +++ +N + P +V +IE+ LK FSV++
Sbjct: 93 ILSKGEIQISETERSYMLDKQFTDICHMLNRMTVNPKNNLPLSVKIIESELKDSGFSVSL 152
Query: 438 NKNSKQQAL 446
NK +K+QAL
Sbjct: 153 NKTTKEQAL 161
>gi|345563887|gb|EGX46870.1| hypothetical protein AOL_s00097g296 [Arthrobotrys oligospora ATCC
24927]
Length = 293
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 160/329 (48%), Gaps = 91/329 (27%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
++ P+NQI++TNV+IVR++KA KRFE+ACYKNKV+ WRN +EKDIDEVLQ H VF N S
Sbjct: 4 RVNQPSNQIKLTNVSIVRIRKAKKRFELACYKNKVLEWRNGVEKDIDEVLQIHQVFLNTS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KG A DL+K A+
Sbjct: 64 KGAVAPTADLQK----------------------------------------------AW 77
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
++Q EI IL KGELQ+ +KER Q+E K++ IV+EKC++ T R +T +IE
Sbjct: 78 PGKNQDEIILDILAKGELQVGEKERGQQLEMLQKEVVQIVTEKCVDPTTGRVYTSGLIEK 137
Query: 275 GLKQI-----------------------------------------HFSVNVNKNSKQQA 293
L+ + V K++K QA
Sbjct: 138 ALEGLMSRNQNSATTTTTTNGEGSSSAAPAESNEKGKEKAKDEPPRWTGVVTTKSAKSQA 197
Query: 294 LEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLI 351
LE I L Q + I R +M++R+ + + V KK+K +++ + +E++ G G
Sbjct: 198 LEAIKALVYYQPIPIARQRMKLRIFLPSAV--AKKVKPTILEMIGQLVDEDFGGDGWNAD 255
Query: 352 CLIDPGKYREIDELVRTETRGQGTLELLN 380
+ DPG YR+I +LV E +G+G +E+L+
Sbjct: 256 VICDPGVYRQISDLVGKEAKGRGRVEVLD 284
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 68/89 (76%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
++ P+NQI++TNV+IVR++KA KRFE+ACYKNKV+ WRN +EKDIDEVLQ H VF N S
Sbjct: 4 RVNQPSNQIKLTNVSIVRIRKAKKRFELACYKNKVLEWRNGVEKDIDEVLQIHQVFLNTS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KG A DL+KA+ ++Q EI IL K
Sbjct: 64 KGAVAPTADLQKAWPGKNQDEIILDILAK 92
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 14/86 (16%)
Query: 356 PGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTET 415
PGK + DE++ L++L E+ GE+ER Q+E K++ IV+EKC++ T
Sbjct: 78 PGKNQ--DEII---------LDILAKGELQVGEKERGQQLEMLQKEVVQIVTEKCVDPTT 126
Query: 416 KRPFTVSMIEAGLKQIHFSVNVNKNS 441
R +T +IE L+ + ++ N+NS
Sbjct: 127 GRVYTSGLIEKALEGL---MSRNQNS 149
>gi|407919333|gb|EKG12583.1| Ribosome maturation protein SBDS [Macrophomina phaseolina MS6]
Length = 302
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 161/337 (47%), Gaps = 96/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I TP NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+D VLQ VF NVSK
Sbjct: 5 IKTPVNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNGVEKDLDNVLQIPNVFMNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ AN +DL KAF + K +D+++
Sbjct: 65 GQVANSQDLAKAFGAD------------KSLDDIILE----------------------- 89
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGELQ+ +KERS+Q+E ++ IV+ K ++ +TKR +T MI+
Sbjct: 90 ----------ILNKGELQVGEKERSAQLERVHAEVIDIVAGKLVDPKTKRVYTTGMIDKA 139
Query: 276 LKQIH--------------------------------FSVNVNKNSKQQALEVIPTL--K 301
L Q+ V NK++K QALE + L
Sbjct: 140 LDQLSSQSAQQTASNSGTSTPNNGEGKEVSKKDLPKWTGVTTNKSAKSQALEAMKALIAY 199
Query: 302 QCMSIERAQMRVRVE-----VSAGVKDVKK------------LKEKLVKCATSVENEEWS 344
Q + + RA+MR+R+ + VK K +K++++ VEN++
Sbjct: 200 QPIPVARARMRLRITCPTTILKQAVKSAPKGGDEGEEKATGTVKDRILSYVEQVENQDVM 259
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G ++PG +R + E + +T+G+ E+L++
Sbjct: 260 GDEWECTGFVEPGAFRALGEFISAQTKGRARAEVLDM 296
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/76 (67%), Positives = 60/76 (78%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I TP NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+D VLQ VF NVSK
Sbjct: 5 IKTPVNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNGVEKDLDNVLQIPNVFMNVSK 64
Query: 64 GQAANKEDLKKAFNTE 79
GQ AN +DL KAF +
Sbjct: 65 GQVANSQDLAKAFGAD 80
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
LE+LN E+ GE+ERS+Q+E ++ IV+ K ++ +TKR +T MI+ L Q+
Sbjct: 88 LEILNKGELQVGEKERSAQLERVHAEVIDIVAGKLVDPKTKRVYTTGMIDKALDQL 143
>gi|321264193|ref|XP_003196814.1| 35S primary protein processing-related protein [Cryptococcus gattii
WM276]
gi|317463291|gb|ADV25027.1| 35S primary protein processing-related protein, putative
[Cryptococcus gattii WM276]
Length = 243
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 153/286 (53%), Gaps = 55/286 (19%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGV---------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
E D+ EVLQ VFTNV KG A KED K F T+D
Sbjct: 43 ------------------------ENDLSEVLQIEQVFTNVPKGLVAKKEDWSKCFGTDD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + IL KGELQI++ ER+ + + ++IATIVSE ++ T R TV M+E + +
Sbjct: 79 MDKVIEEILKKGELQINNLERTQHLSSLSREIATIVSEMTVDPSTSRKHTVGMVEKAMAE 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
+ FSV ++ +K QALE+I L + ++ ++R+RV ++ KD K+ K+K+V V
Sbjct: 139 VGFSVRADRPAKAQALELIKKLGEGDVLQVRRVRMRVRITMPGKDAKRCKDKIVAECDEV 198
Query: 339 ENE----EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
E E EW I I+PG +R + +LV ET+G+G +E +
Sbjct: 199 EEEDMGMEWEA-----IVQINPGTFRTLTDLVSNETKGKGRVESMG 239
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +E D+ EVLQ VFTNV KG
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGVENDLSEVLQIEQVFTNVPKGLV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A KED K F T+D ++ + IL K
Sbjct: 65 AKKEDWSKCFGTDDMDKVIEEILKK 89
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+G L++ NL ER+ + + ++IATIVSE ++ T R TV M+E + ++
Sbjct: 89 KGELQINNL--------ERTQHLSSLSREIATIVSEMTVDPSTSRKHTVGMVEKAMAEVG 140
Query: 433 FSVNVNKNSKQQALE 447
FSV ++ +K QALE
Sbjct: 141 FSVRADRPAKAQALE 155
>gi|448099322|ref|XP_004199121.1| Piso0_002530 [Millerozyma farinosa CBS 7064]
gi|359380543|emb|CCE82784.1| Piso0_002530 [Millerozyma farinosa CBS 7064]
Length = 254
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 160/306 (52%), Gaps = 65/306 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P QI++TNV++VRMKK KRFEIACY+NKV WR IE
Sbjct: 1 MGIINQPAGQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRQRIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
K++DEVLQ +F NVSKGQ A+ EDL K
Sbjct: 46 -------------------------------KNLDEVLQIPQIFLNVSKGQVASNEDLSK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + D +I IL KGE+Q+++KERS+ I+ + + I+S KCIN ++K+ + SMI
Sbjct: 75 CFGSTDSDKIILEILEKGEIQLNEKERSANIQQKNNEFLNIISTKCINPKSKKRYPPSMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVK------DV 324
+ L ++ F VN NK +K QAL+ I L +Q + I RAQM++++ +S K ++
Sbjct: 135 QKALTELKFHVNPNKPTKTQALDAIKLLIARQIIPIARAQMKIKIILSNKAKKSIFDDEI 194
Query: 325 KKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLN 380
K L K++ +E I +IDP YR+I E++ + + G++E+L+
Sbjct: 195 KPLIHKII-------DESQDDSVFECIGVIDPVNYRQIVEILHNDGSKAKKVDGSVEVLD 247
Query: 381 LKEVTE 386
+ ++E
Sbjct: 248 MAAISE 253
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/91 (57%), Positives = 63/91 (69%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P QI++TNV++VRMKK KRFEIACY+NKV WR IEK++DEVLQ +F N
Sbjct: 1 MGIINQPAGQIKLTNVSLVRMKKGKKRFEIACYQNKVQDWRQRIEKNLDEVLQIPQIFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A+ EDL K F + D +I IL K
Sbjct: 61 VSKGQVASNEDLSKCFGSTDSDKIILEILEK 91
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ E+ERS+ I+ + + I+S KCIN ++K+ + SMI+ L ++ F V
Sbjct: 86 LEILEKGEIQLNEKERSANIQQKNNEFLNIISTKCINPKSKKRYPPSMIQKALTELKFHV 145
Query: 436 NVNKNSKQQALE 447
N NK +K QAL+
Sbjct: 146 NPNKPTKTQALD 157
>gi|367014771|ref|XP_003681885.1| hypothetical protein TDEL_0E04310 [Torulaspora delbrueckii]
gi|359749546|emb|CCE92674.1| hypothetical protein TDEL_0E04310 [Torulaspora delbrueckii]
Length = 240
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 155/285 (54%), Gaps = 59/285 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KKA KRFEIACY+NKV +R +E
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEIACYQNKVQDYRKGVE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKGQ A+KEDL K F T D
Sbjct: 45 -------------------------KDLDEVLQIHQVFINVSKGQVASKEDLNKCFETTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
EI IL KGE+Q+S++ER + ++ TIVS KCIN +K+ + +MI L +
Sbjct: 80 IDEIITEILTKGEIQLSERERQVMLNKINNELLTIVSAKCINPVSKKRYPPTMIHKLLVE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ FS +NK +K QALE I L KQ + I RA+M+V+V +S+ + + +KLV +
Sbjct: 140 LKFSPVLNKPAKLQALEAIKLLIVKQIVPIVRAKMKVKVTISSQETERIERLQKLVNGSP 199
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ E WS G LIDP YR++ T G+GT++++++
Sbjct: 200 T--GESWSYLG-----LIDPVMYRDL----VTVCEGKGTVQVIDM 233
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 65/85 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KKA KRFEIACY+NKV +R +EKD+DEVLQ H VF NVSKGQ
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEIACYQNKVQDYRKGVEKDLDEVLQIHQVFINVSKGQV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL K F T D EI IL K
Sbjct: 66 ASKEDLNKCFETTDIDEIITEILTK 90
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 361 EIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFT 420
+IDE++ TE +G ++L E ER + ++ TIVS KCIN +K+ +
Sbjct: 79 DIDEII-TEILTKGEIQL--------SERERQVMLNKINNELLTIVSAKCINPVSKKRYP 129
Query: 421 VSMIEAGLKQIHFSVNVNKNSKQQALE 447
+MI L ++ FS +NK +K QALE
Sbjct: 130 PTMIHKLLVELKFSPVLNKPAKLQALE 156
>gi|399216687|emb|CCF73374.1| unnamed protein product [Babesia microti strain RI]
Length = 351
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/292 (34%), Positives = 157/292 (53%), Gaps = 58/292 (19%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQ+++ +VA VR+K G+RFEIACYKNKV+ WR+ ++ D
Sbjct: 3 LFQPCNQVKIKDVATVRLKLHGQRFEIACYKNKVLDWRSGVKCD---------------- 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
I +V+Q+ +FTNVSKGQ ANK+ ++K F
Sbjct: 47 ------------------------------IKDVVQSDLIFTNVSKGQVANKKQIEKCFK 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+ + EI ++IL KG+LQIS +ER ++ +FKD+ +I+ E CIN +T P T +MIE
Sbjct: 77 SLNNDEIVRVILQKGDLQISHEERLQSLQKKFKDVVSILHEMCINPQTGYPLTRTMIEES 136
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKDVKKLKEKLVK 333
LK FS +++++K+QAL+ LK+ M I RAQ+R+R+ S + ++++ + K
Sbjct: 137 LKSCGFSCTIDESTKKQALKGFSLLKKEMPEHISRAQIRLRILFSHEL--TEQVRSFIDK 194
Query: 334 CATSVENEE-----WSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
C S+ENE + C P YR++D V + GTL+++N
Sbjct: 195 CDVSIENETKNDTCVNSNSFTFTCC--PSYYRDLDNFV-NKLSPPGTLKIVN 243
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 67/88 (76%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQ+++ +VA VR+K G+RFEIACYKNKV+ WR+ ++ DI +V+Q+ +FTNVSK
Sbjct: 3 LFQPCNQVKIKDVATVRLKLHGQRFEIACYKNKVLDWRSGVKCDIKDVVQSDLIFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
GQ ANK+ ++K F + + EI ++IL K
Sbjct: 63 GQVANKKQIEKCFKSLNNDEIVRVILQK 90
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
Query: 363 DELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVS 422
DE+VR + +G L++ EER ++ +FKD+ +I+ E CIN +T P T +
Sbjct: 81 DEIVRVILQ-KGDLQI--------SHEERLQSLQKKFKDVVSILHEMCINPQTGYPLTRT 131
Query: 423 MIEAGLKQIHFSVNVNKNSKQQALE 447
MIE LK FS +++++K+QAL+
Sbjct: 132 MIEESLKSCGFSCTIDESTKKQALK 156
>gi|365764308|gb|EHN05832.1| Sdo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 250
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 157/292 (53%), Gaps = 65/292 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + I+ KGE+Q+S+KER + ++ TIVS KCIN +K+ + +MI L++
Sbjct: 80 VDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-- 334
+ FS +NK +K QALE I L KQ + I RA+M+V+V +S + +L EK+ K
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQ-PELIEKISKLIA 198
Query: 335 -----ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+T E + W+ G LIDP YR++ T +GT+++L++
Sbjct: 199 SSPGESTKPELDPWTCTG-----LIDPANYRDL----MTLCDKKGTVQVLDM 241
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ + I+ K
Sbjct: 66 ANKEDLQKCFGTTNVDDVIEEIMHK 90
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TIVS KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|448103177|ref|XP_004199972.1| Piso0_002530 [Millerozyma farinosa CBS 7064]
gi|359381394|emb|CCE81853.1| Piso0_002530 [Millerozyma farinosa CBS 7064]
Length = 254
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 65/306 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P QIR+TNV++VRMKK KRFEIACY+NKV WR+ IE
Sbjct: 1 MAVINQPAGQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSRIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
K++DEVLQ +F NVSKGQ A+ EDL K
Sbjct: 46 -------------------------------KNLDEVLQIPQIFLNVSKGQVASNEDLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + D +I IL KGE+Q+++KERS+ ++ + + I+S KCIN ++K+ + +MI
Sbjct: 75 CFGSTDNDKIILEILEKGEIQLNEKERSANLQQKNNEFLNIISTKCINPKSKKRYPPTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVK------DV 324
+ L ++ F VN NK +K QAL+ I L +Q + I RAQM++++ +S K ++
Sbjct: 135 QKALTELKFHVNPNKPTKTQALDAIKLLIARQIIPIARAQMKIKIILSNKAKKSIFDNEI 194
Query: 325 KKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTET----RGQGTLELLN 380
K L K++ +E I +IDP YR+I E++ + + G++E+L+
Sbjct: 195 KPLIHKII-------DESQDDSIFECIGVIDPVNYRQIVEILHNDGSKAKKVDGSIEVLD 247
Query: 381 LKEVTE 386
+ ++E
Sbjct: 248 MAAISE 253
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 65/91 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P QIR+TNV++VRMKK KRFEIACY+NKV WR+ IEK++DEVLQ +F N
Sbjct: 1 MAVINQPAGQIRLTNVSLVRMKKGKKRFEIACYQNKVQDWRSRIEKNLDEVLQIPQIFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A+ EDL K F + D +I IL K
Sbjct: 61 VSKGQVASNEDLIKCFGSTDNDKIILEILEK 91
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ E+ERS+ ++ + + I+S KCIN ++K+ + +MI+ L ++ F V
Sbjct: 86 LEILEKGEIQLNEKERSANLQQKNNEFLNIISTKCINPKSKKRYPPTMIQKALTELKFHV 145
Query: 436 NVNKNSKQQALE 447
N NK +K QAL+
Sbjct: 146 NPNKPTKTQALD 157
>gi|345320687|ref|XP_001521865.2| PREDICTED: ribosome maturation protein SBDS-like, partial
[Ornithorhynchus anatinus]
Length = 127
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/130 (62%), Positives = 100/130 (76%), Gaps = 4/130 (3%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
EKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL KGE+Q+SDKER +Q
Sbjct: 1 EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQ 60
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV NK++KQQ +PT K
Sbjct: 61 LEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKANKSTKQQP---VPTRKT 117
Query: 303 -CMSIERAQM 311
C E Q+
Sbjct: 118 VCRKAEAEQV 127
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 55/75 (73%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L EV ++ER +Q+E F+DIATIV++KC+N ETKRP+TV +IE +K IH+SV
Sbjct: 43 QILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVK 102
Query: 437 VNKNSKQQALEEDKT 451
NK++KQQ + KT
Sbjct: 103 ANKSTKQQPVPTRKT 117
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
EKD+DEVLQTH+VF NVSKGQ A KEDL AF T+DQTEICK IL K
Sbjct: 1 EKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEICKQILTK 47
>gi|254568402|ref|XP_002491311.1| Essential protein involved in 60S ribosome maturation [Komagataella
pastoris GS115]
gi|238031108|emb|CAY69031.1| Essential protein involved in 60S ribosome maturation [Komagataella
pastoris GS115]
gi|328352172|emb|CCA38571.1| Ribosome maturation protein SBDS [Komagataella pastoris CBS 7435]
Length = 290
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 142/273 (52%), Gaps = 51/273 (18%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +QI++TNV++VRM+K KRFEIACY+NK+ WR
Sbjct: 53 PMSQIKLTNVSLVRMRKNKKRFEIACYQNKIQDWR------------------------- 87
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
S EKDIDEVLQ VF NVSKGQ A +DLKK F T D
Sbjct: 88 ---------------------SGAEKDIDEVLQIPQVFVNVSKGQVAPHDDLKKCFGTTD 126
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL KGE+Q+S+KER + ++ +VS KCIN +T + + +MI L +
Sbjct: 127 TDTIIKEILNKGEIQLSEKERQANSSKYTAEVLQLVSAKCINPKTMKRYPTTMIHKALNE 186
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ F++ K +K AL+ I L KQ + I RA+M+V++ +++ KD K K+KL T
Sbjct: 187 LKFNLTSTKPAKSHALDAIRLLVSKQLIPIARAKMKVKIVMNS--KDAKASKDKLHSLIT 244
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTE 369
+E+E WS IDP YRE+ + + E
Sbjct: 245 EIESENWSSEWEAF-AYIDPSNYRELFNMAKVE 276
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +QI++TNV++VRM+K KRFEIACY+NK+ WR+ EKDIDEVLQ VF NVSKGQ
Sbjct: 53 PMSQIKLTNVSLVRMRKNKKRFEIACYQNKIQDWRSGAEKDIDEVLQIPQVFVNVSKGQV 112
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A +DLKK F T D I K IL K
Sbjct: 113 APHDDLKKCFGTTDTDTIIKEILNK 137
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER + ++ +VS KCIN +T + + +MI L ++ F++
Sbjct: 133 EILNKGEIQLSEKERQANSSKYTAEVLQLVSAKCINPKTMKRYPTTMIHKALNELKFNLT 192
Query: 437 VNKNSKQQALE 447
K +K AL+
Sbjct: 193 STKPAKSHALD 203
>gi|358377760|gb|EHK15443.1| hypothetical protein TRIVIDRAFT_64650 [Trichoderma virens Gv29-8]
Length = 305
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/344 (31%), Positives = 164/344 (47%), Gaps = 100/344 (29%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF N
Sbjct: 1 MSRINLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VSKGQ A KEDL+KAF K
Sbjct: 61 VSKGQTAPKEDLEKAFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+T+D I IL KGELQ+ DKER++Q+E ++ +IV K ++ TKR +T MI
Sbjct: 79 GKSTDD---IVLEILKKGELQVGDKERAAQLERVHNEVISIVVSKLVDPRTKRVYTPGMI 135
Query: 273 EAGL----KQIH------------------------------FSVNVNKNSKQQALEVIP 298
E L Q H V K++K QAL+ +
Sbjct: 136 EKALDMLSSQAHNGEKTTDSGTATPTTSEAGEAKPKTREHTWTGVVTTKSAKSQALDAMK 195
Query: 299 TL--KQCMSIERAQMRVRVEVSAGV-------------------KDVKKLKEKLVKCATS 337
L Q + + RA+M++RV S V K +K++++
Sbjct: 196 ALIAYQPIPVARARMKLRVSCSTNVLKQAVKAPKAAAKEEDGEAKAAGTVKDRILGYVEQ 255
Query: 338 VENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE+++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 256 VESQDVMGSEWEVVGFVEPGAFKALSDFIGNETKGQGRVEVLDM 299
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF N
Sbjct: 1 MSRINLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKGQ A KEDL+KAF T+ L ++K
Sbjct: 61 VSKGQTAPKEDLEKAFGKGKSTDDIVLEILK 91
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ G++ER++Q+E ++ +IV K ++ TK
Sbjct: 77 GKGKSTDDIV---------LEILKKGELQVGDKERAAQLERVHNEVISIVVSKLVDPRTK 127
Query: 417 RPFTVSMIEAGLKQI 431
R +T MIE L +
Sbjct: 128 RVYTPGMIEKALDML 142
>gi|366992914|ref|XP_003676222.1| hypothetical protein NCAS_0D02800 [Naumovozyma castellii CBS 4309]
gi|342302088|emb|CCC69861.1| hypothetical protein NCAS_0D02800 [Naumovozyma castellii CBS 4309]
Length = 248
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 159/300 (53%), Gaps = 67/300 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KK KRFEIACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVKLKKERKRFEIACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKGQ A+KEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGQVASKEDLQKCFRTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+I K I+M+GE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L +
Sbjct: 80 VDDIIKEIMMRGEIQLSEKERQLMLNKINNEMLTIISAKCINPNSKKRYPPTMIHKALSE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ FS VNK +K QALE I L KQ + I RA+M+V++ + + + V L EK+ K
Sbjct: 140 LKFSPVVNKPAKLQALEAIKLLTTKQIIPIARARMKVKIVLKSNEEPV--LIEKIQKIVV 197
Query: 337 SVE--------NEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
S N W+ G LIDP YR++ L G+G+L+++++ + + +
Sbjct: 198 SGPTASGIQDTNNSWTTVG-----LIDPVNYRDLVSL----CDGKGSLQVIDMAVIDDSQ 248
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 67/85 (78%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KK KRFEIACY+NKV +R IEKD+DEVLQ H VF NVSKGQ
Sbjct: 6 PSGQIKLTNVSLVKLKKERKRFEIACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGQV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL+K F T + +I K I+M+
Sbjct: 66 ASKEDLQKCFRTTNVDDIIKEIMMR 90
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E++ E+ E+ER + ++ TI+S KCIN +K+ + +MI L ++ FS
Sbjct: 86 EIMMRGEIQLSEKERQLMLNKINNEMLTIISAKCINPNSKKRYPPTMIHKALSELKFSPV 145
Query: 437 VNKNSKQQALE 447
VNK +K QALE
Sbjct: 146 VNKPAKLQALE 156
>gi|323336575|gb|EGA77841.1| Sdo1p [Saccharomyces cerevisiae Vin13]
Length = 250
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 157/292 (53%), Gaps = 65/292 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + I+ KGE+Q+S+KER + ++ TIVS KCIN +K+ + +MI L++
Sbjct: 80 VDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-- 334
+ FS +NK +K QALE I L KQ + I RA+M+V+V +S + +L EK+ K
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQ-PELIEKISKLIA 198
Query: 335 -----ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+T E + W+ G LIDP YR++ T +GT+++L++
Sbjct: 199 SSPGESTKPELDPWTCTG-----LIDPXNYRDL----MTLCDKKGTVQVLDM 241
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ + I+ K
Sbjct: 66 ANKEDLQKCFGTTNVDDVIEEIMHK 90
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TIVS KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|82539841|ref|XP_724279.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478872|gb|EAA15844.1| unnamed protein product, putative [Plasmodium yoelii yoelii]
Length = 634
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 138/238 (57%), Gaps = 32/238 (13%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNG----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
KK +N +SSL E +ID+VLQ+H +FTN+SKG+ A K L
Sbjct: 44 ------------KKRNYSNKTYLSSLKICNELNIDDVLQSHLIFTNISKGEIAKKSQLNS 91
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
FN++D EICK IL KG LQIS++ER+ E +KDI ++ E +N +T P + +MI
Sbjct: 92 CFNSDDNYEICKTILEKGTLQISNRERAILKEKMYKDIIEMLHEMSVNPQTGYPLSTNMI 151
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVK-DVKKL 327
E+ +K + +S+N++ ++K+QAL+V L + I+RA MR+++ +K DV KL
Sbjct: 152 ESMIKNVGYSINIDDSTKKQALKVFELLHKEYEDVIQRAFMRIQIICDDFIKNDVIKL 209
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 17/108 (15%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEK-------------- 46
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N ++
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGKKRNYSNKTYLSSLKIC 60
Query: 47 ---DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
+ID+VLQ+H +FTN+SKG+ A K L FN++D EICK IL K
Sbjct: 61 NELNIDDVLQSHLIFTNISKGEIAKKSQLNSCFNSDDNYEICKTILEK 108
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+GTL++ N ER+ E +KDI ++ E +N +T P + +MIE+ +K +
Sbjct: 108 KGTLQISN--------RERAILKEKMYKDIIEMLHEMSVNPQTGYPLSTNMIESMIKNVG 159
Query: 433 FSVNVNKNSKQQAL 446
+S+N++ ++K+QAL
Sbjct: 160 YSINIDDSTKKQAL 173
>gi|401624715|gb|EJS42765.1| YLR022C [Saccharomyces arboricola H-6]
Length = 250
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 158/291 (54%), Gaps = 63/291 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ K I+ KGE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L++
Sbjct: 80 IDDVIKEIMHKGEIQLSEKERQLMLNKVNNELLTIISAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEV------SAGVKDVKKLKEK 330
+ FS +NK +K QALE I L KQ + I RA+M+V+V + S ++++KKL
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIVPIVRAKMKVKVAIDEPSKQSELIENIKKLITT 199
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ +T+ E W+ G LIDP YR++ L +GT+++L++
Sbjct: 200 SPQESTAPEMNSWTCIG-----LIDPVNYRDLITL----CDKKGTIQVLDM 241
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ K I+ K
Sbjct: 66 ANKEDLQKCFGTTNIDDVIKEIMHK 90
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TI+S KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMLNKVNNELLTIISAKCINPVSKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|6323050|ref|NP_013122.1| Sdo1p [Saccharomyces cerevisiae S288c]
gi|2501598|sp|Q07953.1|SDO1_YEAST RecName: Full=Ribosome maturation protein SDO1
gi|1360328|emb|CAA97545.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151941190|gb|EDN59568.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190406063|gb|EDV09330.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|207343196|gb|EDZ70733.1| YLR022Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269175|gb|EEU04507.1| Sdo1p [Saccharomyces cerevisiae JAY291]
gi|259148011|emb|CAY81260.1| Sdo1p [Saccharomyces cerevisiae EC1118]
gi|285813444|tpg|DAA09340.1| TPA: Sdo1p [Saccharomyces cerevisiae S288c]
gi|323308068|gb|EGA61321.1| Sdo1p [Saccharomyces cerevisiae FostersO]
gi|349579748|dbj|GAA24909.1| K7_Sdo1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297998|gb|EIW09097.1| Sdo1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 250
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 157/292 (53%), Gaps = 65/292 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + I+ KGE+Q+S+KER + ++ TIVS KCIN +K+ + +MI L++
Sbjct: 80 VDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-- 334
+ FS +NK +K QALE I L KQ + I RA+M+V+V +S + +L EK+ K
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQ-PELIEKISKLIA 198
Query: 335 -----ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+T E + W+ G LIDP YR++ T +GT+++L++
Sbjct: 199 SSPGESTKPELDPWTCTG-----LIDPVNYRDL----MTLCDKKGTVQVLDM 241
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ + I+ K
Sbjct: 66 ANKEDLQKCFGTTNVDDVIEEIMHK 90
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TIVS KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|219128419|ref|XP_002184411.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404212|gb|EEC44160.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 252
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 62/292 (21%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P NQ+R+TNVA+VR ++G+RFEIACY+NKV+ +R +E
Sbjct: 4 QINQPINQVRLTNVAVVRFNRSGRRFEIACYRNKVMDFRAGLET---------------- 47
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
D+ EVLQT +FTNVSKG+ A +DL+KAF
Sbjct: 48 ------------------------------DLSEVLQTDRIFTNVSKGEFAKTKDLEKAF 77
Query: 215 NTEDQTEICKLILMKG-ELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
T D+ I K+IL +G LQ+SD ER+ QI+N IAT V+ C++ +T RP+TVS I+
Sbjct: 78 GTHDEEAIAKIILEQGNSLQVSDLERNQQIQNTLSQIATWVANNCVHPDTCRPYTVSQIK 137
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKD-----VKKLK 328
L Q +++V +K K+Q L+ + LK + IERA+M + ++ + G + +K +
Sbjct: 138 HVL-QKNYAVQTHKAIKRQYLDAVKFLKDVIPIERAKMELSLQYARGEESMVEEGLKDIP 196
Query: 329 EKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQ-GTLELL 379
+L+K E+ + + + I +DP YR +DEL +R Q G LE+L
Sbjct: 197 HRLIK-----ESNDSATQSSVFILQVDPSMYRALDELA---SRLQSGKLEIL 240
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 67/87 (77%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P NQ+R+TNVA+VR ++G+RFEIACY+NKV+ +R +E D+ EVLQT +FTNVS
Sbjct: 4 QINQPINQVRLTNVAVVRFNRSGRRFEIACYRNKVMDFRAGLETDLSEVLQTDRIFTNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLIL 89
KG+ A +DL+KAF T D+ I K+IL
Sbjct: 64 KGEFAKTKDLEKAFGTHDEEAIAKIIL 90
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 390 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ER+ QI+N IAT V+ C++ +T RP+TVS I+ L Q +++V +K K+Q L+
Sbjct: 102 ERNQQIQNTLSQIATWVANNCVHPDTCRPYTVSQIKHVL-QKNYAVQTHKAIKRQYLD 158
>gi|302916761|ref|XP_003052191.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733130|gb|EEU46478.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 305
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 168/341 (49%), Gaps = 99/341 (29%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A +EDL KAF KG+A +
Sbjct: 64 KGQTAPREDLDKAFG-------------------------------KGKATD-------- 84
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+I IL KGE+Q+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE
Sbjct: 85 ------DIILEILKKGEMQVGEKERAAQLERVHNEVISIVASKLVDPRTKRVYTSGMIEK 138
Query: 275 GL--------------------------------KQIHFS-VNVNKNSKQQALEVIPTL- 300
L K+ H++ V+ K++K QAL+ + L
Sbjct: 139 ALDMLSSQAHTSTPDKSATGTPATGDDGEAKPRPKEHHWTGVSTTKSAKSQALDAMKALI 198
Query: 301 -KQCMSIERAQMRVRVEVSAGV-------------------KDVKKLKEKLVKCATSVEN 340
Q + + RA+MR+R+ + V K V +K+K++ VE+
Sbjct: 199 SHQPIPVARARMRLRIACTTSVLKQAVKGPKGGNKDEDGEQKAVGTVKDKILSYVEQVES 258
Query: 341 EEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 259 QDVMGSEWEVVGFVEPGAFKALSDFIGNETKGQGRVEVLDM 299
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A +EDL KAF T+ L ++K
Sbjct: 64 KGQTAPREDLDKAFGKGKATDDIILEILK 92
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D+++ LE+L E+ GE+ER++Q+E ++ +IV+ K ++ TK
Sbjct: 78 GKGKATDDII---------LEILKKGEMQVGEKERAAQLERVHNEVISIVASKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTSGMIEKAL 140
>gi|403368911|gb|EJY84290.1| hypothetical protein OXYTRI_17969 [Oxytricha trifallax]
Length = 344
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 149/274 (54%), Gaps = 48/274 (17%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I TP NQIR+TNVA++R+KK GK+FEIACYKNK ++WRN
Sbjct: 2 IKTPVNQIRLTNVAVIRLKKGGKKFEIACYKNKAVNWRNK-------------------- 41
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
+E ++ EVLQ +FTNVSKG+ A ++DL+ F
Sbjct: 42 --------------------------QESNLSEVLQIDQIFTNVSKGEVAKQKDLQAVFG 75
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
Q EI IL KGELQ+S+ ER +++ K+IA I+++KC+NT + F VS+I
Sbjct: 76 KMTQDEIVIEILNKGELQVSELERDEHLDSLKKEIANIIAQKCVNTSDGKQFPVSIIMKA 135
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+ + + +N N+K+QAL IP LK + I+RA+MR+++ +++LKE +++
Sbjct: 136 MNEANVKINPKDNAKKQALTFIPDLKNVIPIDRAKMRLKISFERQ-DQLERLKE-VIERD 193
Query: 336 TSVENEEWSGGGLLLICLIDPGKYREIDELVRTE 369
+ + E G + C I P +RE++ +V+ +
Sbjct: 194 YAQDYEVERIGEKFMQCQIQPNMFRELNNIVKDD 227
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 64/88 (72%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I TP NQIR+TNVA++R+KK GK+FEIACYKNK ++WRN E ++ EVLQ +FTNVSK
Sbjct: 2 IKTPVNQIRLTNVAVIRLKKGGKKFEIACYKNKAVNWRNKQESNLSEVLQIDQIFTNVSK 61
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A ++DL+ F Q EI IL K
Sbjct: 62 GEVAKQKDLQAVFGKMTQDEIVIEILNK 89
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
T+ + +E+LN E+ E ER +++ K+IA I+++KC+NT + F VS+I +
Sbjct: 78 TQDEIVIEILNKGELQVSELERDEHLDSLKKEIANIIAQKCVNTSDGKQFPVSIIMKAMN 137
Query: 430 QIHFSVNVNKNSKQQAL 446
+ + +N N+K+QAL
Sbjct: 138 EANVKINPKDNAKKQAL 154
>gi|342879676|gb|EGU80916.1| hypothetical protein FOXB_08580 [Fusarium oxysporum Fo5176]
Length = 308
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 103/347 (29%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS++ P+NQIR+TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRLIQQPSNQIRLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKGQ A +EDL KAF
Sbjct: 61 NVSKGQTAPREDLDKAFG------------------------------------------ 78
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K +T+D I IL KGE+Q+ +KER++Q E ++ +IV+ K ++ TKR +T M
Sbjct: 79 KGKSTDD---IILEILKKGEMQVGEKERAAQTERVHNEVVSIVASKLVDPRTKRVYTSGM 135
Query: 272 IEAGL----KQIHFS--------------------------------VNVNKNSKQQALE 295
IE L Q H + V+ K++K QALE
Sbjct: 136 IEKALDMLSSQAHTATPDKSAAGSATGTPATGEAGEAKPRAQHNWTGVSTTKSAKSQALE 195
Query: 296 VIPTL--KQCMSIERAQMRVRVEVSAGV-------------------KDVKKLKEKLVKC 334
+ L Q + + RA+MR+R+ + V K V +K+K++
Sbjct: 196 AMKALIAHQPIPVARARMRLRIACTTNVLKQAVKGAKGANKEEDGEQKAVGTVKDKILSY 255
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE+++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 256 VEQVESQDVVGSEWEVVGFVEPGAFKPLSDFIGNETKGQGRVEVLDM 302
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS++ P+NQIR+TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRLIQQPSNQIRLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ A +EDL KAF T+ L ++K
Sbjct: 61 NVSKGQTAPREDLDKAFGKGKSTDDIILEILK 92
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D+++ LE+L E+ GE+ER++Q E ++ +IV+ K ++ TK
Sbjct: 78 GKGKSTDDII---------LEILKKGEMQVGEKERAAQTERVHNEVVSIVASKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTSGMIEKAL 140
>gi|405119362|gb|AFR94135.1| shwachman-Bodian-Diamond syndrome [Cryptococcus neoformans var.
grubii H99]
Length = 243
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 151/286 (52%), Gaps = 55/286 (19%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGV---------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
E D+ EVLQ VFTNV KG A KED K F T+D
Sbjct: 43 ------------------------ENDLSEVLQIEQVFTNVPKGLVAKKEDWSKCFGTDD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + IL KGELQI++ ER+ + + ++IATIVSE ++ T R TV M+E + +
Sbjct: 79 MAKVIEEILKKGELQINNLERTQHLSSLSREIATIVSEMTVDPSTSRKHTVGMVEKAMAE 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
+ FSV ++ +K QALE+I L + + ++R+RV ++ KD K+ K+K+V V
Sbjct: 139 VGFSVRADRPAKAQALELIKKLGEGDVLPVRRVRMRVRITMPGKDAKRCKDKIVAECDEV 198
Query: 339 ENE----EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
E E EW I I+P +R + +LV ET+G+G +E +
Sbjct: 199 EEEDMGMEWEA-----IVQINPSTFRTLTDLVNNETKGKGRVESMG 239
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +E D+ EVLQ VFTNV KG
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGVENDLSEVLQIEQVFTNVPKGLV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A KED K F T+D ++ + IL K
Sbjct: 65 AKKEDWSKCFGTDDMAKVIEEILKK 89
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+G L++ NL ER+ + + ++IATIVSE ++ T R TV M+E + ++
Sbjct: 89 KGELQINNL--------ERTQHLSSLSREIATIVSEMTVDPSTSRKHTVGMVEKAMAEVG 140
Query: 433 FSVNVNKNSKQQALE 447
FSV ++ +K QALE
Sbjct: 141 FSVRADRPAKAQALE 155
>gi|393247574|gb|EJD55081.1| SBDS-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 356
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 124/225 (55%), Gaps = 48/225 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV+IVR+KK GKRFEIACYKNKV WR +E
Sbjct: 6 PSGQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+D+VLQ VF NVSKG+ A EDL KAF T D
Sbjct: 46 --------------------------DLDDVLQIANVFMNVSKGEVAKSEDLSKAFGTGD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL KGELQ+ +KER ++ N +++IA V+EKC++ T RP++V +IE + +
Sbjct: 80 IEAIVKEILKKGELQVGEKEREHELGNLWREIAMQVAEKCVDPSTGRPYSVGIIEKAMHE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTLK--QCMSIERAQMRVRVEVSAGV 321
FSV + K +K Q + I ++ + ++RA+MR+RV +SA V
Sbjct: 140 AGFSVKIGKPAKAQINDCIKLIQTESKLPLQRARMRIRVVLSAAV 184
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 62/85 (72%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV+IVR+KK GKRFEIACYKNKV WR +E D+D+VLQ VF NVSKG+
Sbjct: 6 PSGQIKLTNVSIVRLKKGGKRFEIACYKNKVQEWRTGVETDLDDVLQIANVFMNVSKGEV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A EDL KAF T D I K IL K
Sbjct: 66 AKSEDLSKAFGTGDIEAIVKEILKK 90
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ GE+ER ++ N +++IA V+EKC++ T RP++V +IE + + FSV
Sbjct: 86 EILKKGELQVGEKEREHELGNLWREIAMQVAEKCVDPSTGRPYSVGIIEKAMHEAGFSVK 145
Query: 437 VNKNSKQQ 444
+ K +K Q
Sbjct: 146 IGKPAKAQ 153
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Query: 327 LKEKLVKCATSVE-----NEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
L++++++CA VE EEW + LIDP + + I++L++ E+RG+G E L L
Sbjct: 296 LRKRILECAEQVEKETSLGEEWDA-----VILIDPAQLKTINDLLQKESRGRGRTETLAL 350
>gi|322695970|gb|EFY87769.1| UPF0023 family protein [Metarhizium acridum CQMa 102]
Length = 311
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 164/347 (47%), Gaps = 105/347 (30%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A KEDL+KAF K
Sbjct: 64 KGQTAPKEDLEKAFG------------------------------------------KGK 81
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+T+D I IL KGELQ+ +KER++Q+E ++ IV+ K ++ TKR +T MIE
Sbjct: 82 STDD---IVLEILKKGELQVGEKERAAQLERVHNEVIGIVASKLVDPRTKRVYTSGMIEK 138
Query: 275 GL----KQIH-----------------------------------FSVNVNKNSKQQALE 295
L Q H V K++K QALE
Sbjct: 139 ALDMLSSQAHNTDKDKSATASGAATPTPAAGNDGEARPRTKEHNWTGVVTTKSAKSQALE 198
Query: 296 VIPTL--KQCMSIERAQMRVR-----------VEVSAGV--------KDVKKLKEKLVKC 334
+ L Q + + RA+MR+R V+V+ G K +K+K++
Sbjct: 199 AMKALIAYQPIPVARARMRLRISCPTSVLKQAVKVAKGAAKEEDGEQKAPGTVKDKILGY 258
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VEN++ G ++ ++PG ++ + + + ETRGQG +E+L++
Sbjct: 259 VEQVENQDVMGSEWEVVGFVEPGAFKALSDFIGNETRGQGRVEVLDM 305
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A KEDL+KAF T+ L ++K
Sbjct: 64 KGQTAPKEDLEKAFGKGKSTDDIVLEILK 92
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ GE+ER++Q+E ++ IV+ K ++ TK
Sbjct: 78 GKGKSTDDIV---------LEILKKGELQVGEKERAAQLERVHNEVIGIVASKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTSGMIEKAL 140
>gi|443921942|gb|ELU41466.1| F-box/WD repeat-containing protein 11 [Rhizoctonia solani AG-1 IA]
Length = 812
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 20/205 (9%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+DEVLQ + VFTNVSKGQA+N ++L+KAF D +EI K IL KGELQ+ DKER+ +
Sbjct: 626 ETDLDEVLQINNVFTNVSKGQASNSDELQKAFGKTDVSEIVKEILKKGELQVGDKERAHE 685
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+K+IAT V+EKC++ T++P+ V +IE + + FSV KN+K Q
Sbjct: 686 SSQLWKEIATQVAEKCVDPTTQKPYPVGIIEKAMTEAGFSVKTGKNAKAQ---------- 735
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI 362
RA+MRVR+ + + KD K+LK+++V+ A VE+E+W G + LIDPG++R +
Sbjct: 736 -----RARMRVRITMPS--KDGKRLKDQVVQGADKVEDEDW-GEEWQITMLIDPGQFRVL 787
Query: 363 DELVRT--ETRGQGTLELLNLKEVT 385
ELV++ E +G G +E L+ T
Sbjct: 788 TELVQSDKELKGSGRIETLSFSAST 812
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
E D+DEVLQ + VFTNVSKGQA+N ++L+KAF D +EI K IL K
Sbjct: 626 ETDLDEVLQINNVFTNVSKGQASNSDELQKAFGKTDVSEIVKEILKK 672
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ G++ER+ + +K+IAT V+EKC++ T++P+ V +IE + + FSV
Sbjct: 668 EILKKGELQVGDKERAHESSQLWKEIATQVAEKCVDPTTQKPYPVGIIEKAMTEAGFSVK 727
Query: 437 VNKNSKQQ 444
KN+K Q
Sbjct: 728 TGKNAKAQ 735
>gi|46125033|ref|XP_387070.1| hypothetical protein FG06894.1 [Gibberella zeae PH-1]
gi|408388268|gb|EKJ67954.1| hypothetical protein FPSE_11765 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 163/344 (47%), Gaps = 102/344 (29%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QIQQPSNQIKLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A +EDL KAF K
Sbjct: 64 KGQTAPREDLDKAFG------------------------------------------KGK 81
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+T+D I IL KGE+Q+ +KER++Q E ++ +IV+ K ++ TKR +T MIE
Sbjct: 82 STDD---IILEILKKGEMQVGEKERAAQTERVHNEVVSIVASKLVDPRTKRVYTSGMIEK 138
Query: 275 GL----KQIH--------------------------------FSVNVNKNSKQQALEVIP 298
L Q H V+ K++K QALE +
Sbjct: 139 ALDMLSSQAHNATPDKSAAGSATGTPATGEAGEAKPRPQHNWTGVSTTKSAKSQALEAMK 198
Query: 299 TL--KQCMSIERAQMRVRVEVSAGV-------------------KDVKKLKEKLVKCATS 337
L Q + + RA+MR+R+ + V K V +K+K++
Sbjct: 199 ALIAHQPIPVARARMRLRIACTTNVLKQAIKAPKGANKEEEGEQKAVGTVKDKILSYVEQ 258
Query: 338 VENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE+++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 259 VESQDVVGSEWEVVGFVEPGAFKPLSDFIGNETKGQGRVEVLDM 302
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 65/89 (73%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QIQQPSNQIKLTNVSLVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A +EDL KAF T+ L ++K
Sbjct: 64 KGQTAPREDLDKAFGKGKSTDDIILEILK 92
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D+++ LE+L E+ GE+ER++Q E ++ +IV+ K ++ TK
Sbjct: 78 GKGKSTDDII---------LEILKKGEMQVGEKERAAQTERVHNEVVSIVASKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTSGMIEKAL 140
>gi|300175259|emb|CBK20570.2| unnamed protein product [Blastocystis hominis]
Length = 372
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 142/280 (50%), Gaps = 62/280 (22%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P +I++TNVAI++ + GKRFEIACYKNK+++WRN IE
Sbjct: 4 RIVQPVGKIKLTNVAIIKYEHGGKRFEIACYKNKIVNWRNGIE----------------- 46
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KDIDEVLQT +F N +KG AA+ ++L + F
Sbjct: 47 -----------------------------KDIDEVLQTPYIFLNATKGIAASNDELLRCF 77
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
T D + I ++IL KG QIS KER Q+++ +IAT++SE C N +T FTVSMI+
Sbjct: 78 GTADISVISRIILEKGTEQISGKEREHQLQSVTNEIATLISEMCYNPDTGSAFTVSMIQR 137
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
+K H V +N+ K+QAL +I LK+ M IER +M++++ V E
Sbjct: 138 AIKDCHIIVKLNQPPKKQALHIIQQLKKSMRIERNKMQIKLAFPVHCLAVDSFLEMQQIR 197
Query: 335 AT-------SVENEEWSGGGLLLICLIDPGKYREIDELVR 367
AT S E E+ LIDP Y+ +D+ +
Sbjct: 198 ATNQTIDSESSETREF---------LIDPADYKAVDKFCQ 228
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 69/94 (73%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P +I++TNVAI++ + GKRFEIACYKNK+++WRN IEKDIDEVLQT +F N +
Sbjct: 4 RIVQPVGKIKLTNVAIIKYEHGGKRFEIACYKNKIVNWRNGIEKDIDEVLQTPYIFLNAT 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
KG AA+ ++L + F T D + I ++IL K +I
Sbjct: 64 KGIAASNDELLRCFGTADISVISRIILEKGTEQI 97
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Query: 363 DELVRTETRGQGTLELLNLKEVTEGEE-----ERSSQIENQFKDIATIVSEKCINTETKR 417
DEL+R G + +++ + +G E ER Q+++ +IAT++SE C N +T
Sbjct: 71 DELLRC--FGTADISVISRIILEKGTEQISGKEREHQLQSVTNEIATLISEMCYNPDTGS 128
Query: 418 PFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
FTVSMI+ +K H V +N+ K+QAL
Sbjct: 129 AFTVSMIQRAIKDCHIIVKLNQPPKKQALH 158
>gi|156102302|ref|XP_001616844.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805718|gb|EDL47117.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 656
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 129/225 (57%), Gaps = 38/225 (16%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNG----------------- 43
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
K L+ LNI D+VLQ+H +FTNVSKG+ A K +L
Sbjct: 44 --------KPGLQDGGERTELNI-----------DDVLQSHLIFTNVSKGEIAKKSELNS 84
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
FN+++ EICK IL KG LQIS+KERS E +KD+ I+ E +N +T P + +MI
Sbjct: 85 CFNSDNNYEICKTILEKGTLQISNKERSIMKEKIYKDMIEILHEMSVNPQTGYPLSTNMI 144
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRV 315
E+ +K + +S+N++ ++K+QAL+V L + I+RA MR+++
Sbjct: 145 ESMVKNVGYSINIDDSAKKQALKVFDILSKEYDDVIQRAFMRIQI 189
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 10/101 (9%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNN----------IEKDIDE 50
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN E +ID+
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNGKPGLQDGGERTELNIDD 60
Query: 51 VLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VLQ+H +FTNVSKG+ A K +L FN+++ EICK IL K
Sbjct: 61 VLQSHLIFTNVSKGEIAKKSELNSCFNSDNNYEICKTILEK 101
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+GTL++ N +ERS E +KD+ I+ E +N +T P + +MIE+ +K +
Sbjct: 101 KGTLQISN--------KERSIMKEKIYKDMIEILHEMSVNPQTGYPLSTNMIESMVKNVG 152
Query: 433 FSVNVNKNSKQQAL 446
+S+N++ ++K+QAL
Sbjct: 153 YSINIDDSAKKQAL 166
>gi|322707044|gb|EFY98623.1| UPF0023 family protein [Metarhizium anisopliae ARSEF 23]
Length = 313
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/349 (31%), Positives = 161/349 (46%), Gaps = 107/349 (30%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A KEDL+KAF K
Sbjct: 64 KGQTAPKEDLEKAFG------------------------------------------KGK 81
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+T+D I IL KGELQ+ +KER++Q+E ++ IV+ K ++ TKR +T MIE
Sbjct: 82 STDD---IVLEILKKGELQVGEKERAAQLERVHNEVIGIVASKLVDPRTKRVYTSGMIEK 138
Query: 275 GL-----------------------------------------KQIHFSVNVNKNSKQQA 293
L + I V K++K QA
Sbjct: 139 ALDMLSSQAHNADKDKSATASGAATPTTTTAASDDGEAKPRTKEHIWTGVVTTKSAKSQA 198
Query: 294 LEVIPTL--KQCMSIERAQMRVRVEVSAGV-------------------KDVKKLKEKLV 332
LE + L Q + + RA+MR+R+ V K +K+K++
Sbjct: 199 LEAMKALIAYQPIPVARARMRLRISCPTSVLKQAVKAAKAAAKEEDGEQKAPGTVKDKIL 258
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VEN++ G ++ ++PG ++ + + + ETRGQG +E+L++
Sbjct: 259 GYVEQVENQDVMGSEWEVVGFVEPGAFKALSDFIGNETRGQGRVEVLDM 307
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A KEDL+KAF T+ L ++K
Sbjct: 64 KGQTAPKEDLEKAFGKGKSTDDIVLEILK 92
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ GE+ER++Q+E ++ IV+ K ++ TK
Sbjct: 78 GKGKSTDDIV---------LEILKKGELQVGEKERAAQLERVHNEVIGIVASKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTSGMIEKAL 140
>gi|389585854|dbj|GAB68584.1| hypothetical protein PCYB_134580 [Plasmodium cynomolgi strain B]
Length = 664
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 130/233 (55%), Gaps = 48/233 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN E
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNGTE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
LNI D+VLQ+H +FTNVSKG+ A K +L
Sbjct: 46 --------------------LNI-----------DDVLQSHLIFTNVSKGEIAKKSELNS 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
FN+++ EICK IL KG LQIS+KERS E +KD+ I+ E +N +T P + +MI
Sbjct: 75 CFNSDNNYEICKTILEKGTLQISNKERSIMKEKIYKDMIEILHEMSVNPQTGYPLSTNMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKD 323
E+ +K I +S+N++ ++K+QAL+V L + I+RA MR+++ +KD
Sbjct: 135 ESMVKNIGYSINIDDSAKKQALKVFDILSKEYDDVIQRAFMRIQIICDDYIKD 187
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN E +ID+VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNGTELNIDDVLQSHLIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A K +L FN+++ EICK IL K
Sbjct: 61 VSKGEIAKKSELNSCFNSDNNYEICKTILEK 91
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+GTL++ N +ERS E +KD+ I+ E +N +T P + +MIE+ +K I
Sbjct: 91 KGTLQISN--------KERSIMKEKIYKDMIEILHEMSVNPQTGYPLSTNMIESMVKNIG 142
Query: 433 FSVNVNKNSKQQAL 446
+S+N++ ++K+QAL
Sbjct: 143 YSINIDDSAKKQAL 156
>gi|451845392|gb|EMD58705.1| hypothetical protein COCSADRAFT_41810 [Cochliobolus sativus ND90Pr]
Length = 301
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 108/337 (32%), Positives = 160/337 (47%), Gaps = 97/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+ VLQ VF NVSK
Sbjct: 5 IIKPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNKVEKDLSNVLQIENVFLNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A K DL+KAF L
Sbjct: 65 GQVAPKTDLEKAFPKKSLE----------------------------------------- 83
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI IL GELQ+ +KER++++E ++ IVS K ++ +TKR +T MIE
Sbjct: 84 -----EIIINILDHGELQVGEKERNAELERTKNEVIDIVSGKLVDPKTKRVYTTGMIEKA 138
Query: 276 LKQIHFS-------------------------------VNVNKNSKQQALEVIPTL--KQ 302
L Q+ + V NK++K QAL + L Q
Sbjct: 139 LDQLSSAAASQQSEKEKGEAKEDGDEKAKAKELPKWTGVVTNKSAKSQALFAMKALIAHQ 198
Query: 303 CMSIERAQMRVRV---------------EVSAGVKD---VKKLKEKLVKCATSVENEEWS 344
+ + R QM++R+ + AG +D V +K+ ++ VEN++
Sbjct: 199 PIPVARMQMKLRITCPTSVLKQSIKTAPKAQAGAEDKGTVGTVKDAILGLMEKVENQDTV 258
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + LI+PG ++ ++EL+ +T+G+G +E+L +
Sbjct: 259 GAEWEAVGLIEPGAFKGLNELIEGQTKGRGNVEVLEM 295
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+ VLQ VF NVSK
Sbjct: 5 IIKPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNKVEKDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A K DL+KAF + EI IL
Sbjct: 65 GQVAPKTDLEKAFPKKSLEEIIINIL 90
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+ +L+ E+ GE+ER++++E ++ IVS K ++ +TKR +T MIE L Q+ +
Sbjct: 87 INILDHGELQVGEKERNAELERTKNEVIDIVSGKLVDPKTKRVYTTGMIEKALDQLSSAA 146
Query: 436 NVNKNSKQQA 445
++ K++
Sbjct: 147 ASQQSEKEKG 156
>gi|429863444|gb|ELA37895.1| upf0023 family protein [Colletotrichum gloeosporioides Nara gc5]
Length = 297
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/344 (31%), Positives = 166/344 (48%), Gaps = 101/344 (29%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
S+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ +E D+D VLQ VF NV
Sbjct: 3 SRINQPSNQIKLTNVSMVRLKKGKKRFEIACYKNKVMEWRSGVETDLDNVLQIPNVFLNV 62
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
SKGQ A KEDL+KAF K
Sbjct: 63 SKGQTAPKEDLEKAFG------------------------------------------KG 80
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
+T+D I IL KGE+Q+ KER+ Q+E ++ IV+ + ++ TKR +T MIE
Sbjct: 81 KSTDD---IVLEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTKRVYTTGMIE 137
Query: 274 -------------------AGLKQIHFSVN----------------------------VN 286
AG K +VN
Sbjct: 138 KALDMLSSAAHSATEDAAGAGKKGGSSAVNSGAGTPAGGEEGEAKPREKSVPHWTGVVTT 197
Query: 287 KNSKQQALEVIPTL--KQCMSIERAQMRVR--VEVSAGVKDVKKLKEKLVKCATSVENEE 342
K++K QALE + L Q + ++RA+MR+R + AG +K++++ VE+++
Sbjct: 198 KSAKSQALEAMKALIAAQPIPVQRARMRLRDGEQAKAGT-----VKDRILGFVEQVESQD 252
Query: 343 WSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
G ++ ++PG ++ + + + +ETRGQG +E+L++ + E
Sbjct: 253 VLGSEWEVVGFVEPGAFKGLGDFISSETRGQGRVEVLDMAVIHE 296
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 67/90 (74%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
S+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ +E D+D VLQ VF NV
Sbjct: 3 SRINQPSNQIKLTNVSMVRLKKGKKRFEIACYKNKVMEWRSGVETDLDNVLQIPNVFLNV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A KEDL+KAF T+ L ++K
Sbjct: 63 SKGQTAPKEDLEKAFGKGKSTDDIVLEILK 92
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ G +ER+ Q+E ++ IV+ + ++ TK
Sbjct: 78 GKGKSTDDIV---------LEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTK 128
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDKTSGIYSS 457
R +T MIE L + + + A ++ +S + S
Sbjct: 129 RVYTTGMIEKALDMLSSAAHSATEDAAGAGKKGGSSAVNSG 169
>gi|58260410|ref|XP_567615.1| 35S primary transcript processing-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134117401|ref|XP_772594.1| hypothetical protein CNBK2980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255211|gb|EAL17947.1| hypothetical protein CNBK2980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229696|gb|AAW46098.1| 35S primary transcript processing-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 243
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 150/286 (52%), Gaps = 55/286 (19%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGV---------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
E D+ EVLQ VFTNV KG A KED K F T+D
Sbjct: 43 ------------------------ENDLSEVLQIEQVFTNVPKGLVAKKEDWSKCFGTDD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + IL KGELQI++ ER+ + + ++IATIVSE ++ T R TV M+E + +
Sbjct: 79 LNKVIEEILKKGELQINNLERTQHLSSLSREIATIVSEMTVDPNTSRKHTVGMVEKAMAE 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV 338
+ FSV ++ +K QALE+I L + + ++R+RV ++ KD K+ K+K+V V
Sbjct: 139 VGFSVRADRPAKAQALELIKKLAEGDVLPVRRVRMRVRITMPGKDAKRCKDKIVAECDEV 198
Query: 339 ENE----EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
E E EW I I+P +R + +LV E +G+G +E +
Sbjct: 199 EEEDMGMEWEA-----IVQINPSTFRTLTDLVNNEAKGKGRVESMG 239
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 61/85 (71%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P QI++TNV+IVRMKK GKRFEIACY+NKV +R+ +E D+ EVLQ VFTNV KG
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYQNKVSEFRSGVENDLSEVLQIEQVFTNVPKGLV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A KED K F T+D ++ + IL K
Sbjct: 65 AKKEDWSKCFGTDDLNKVIEEILKK 89
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+G L++ NL ER+ + + ++IATIVSE ++ T R TV M+E + ++
Sbjct: 89 KGELQINNL--------ERTQHLSSLSREIATIVSEMTVDPNTSRKHTVGMVEKAMAEVG 140
Query: 433 FSVNVNKNSKQQALE 447
FSV ++ +K QALE
Sbjct: 141 FSVRADRPAKAQALE 155
>gi|224000143|ref|XP_002289744.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974952|gb|EED93281.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 182
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/221 (37%), Positives = 129/221 (58%), Gaps = 48/221 (21%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P NQ+R+TNVA+VR+ + G RFE+ACY+NK++++R E
Sbjct: 4 QITQPVNQVRLTNVAVVRLSRGGHRFEVACYRNKIVNYRQGTET---------------- 47
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
D+ EVLQT TVFTNVSKGQ A L++ F
Sbjct: 48 ------------------------------DLSEVLQTTTVFTNVSKGQFAKSSLLQECF 77
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
T D+ E+C+ IL KG++QISD+ER+ Q+E+ +++A++VSEKCI+ ++RP+T++ +
Sbjct: 78 GTSDEEEVCRFILEKGDVQISDQERAVQLESTIREVASMVSEKCIHPISRRPYTMAQVRD 137
Query: 275 GLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRV 313
+K F V+ +N KQQ L+ + L K+ ++IERA+M++
Sbjct: 138 AMKSAGFMVHPTRNIKQQFLDCVRLLQEKKVLNIERAKMQL 178
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 66/89 (74%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P NQ+R+TNVA+VR+ + G RFE+ACY+NK++++R E D+ EVLQT TVFTNVS
Sbjct: 4 QITQPVNQVRLTNVAVVRLSRGGHRFEVACYRNKIVNYRQGTETDLSEVLQTTTVFTNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A L++ F T D+ E+C+ IL K
Sbjct: 64 KGQFAKSSLLQECFGTSDEEEVCRFILEK 92
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 47/70 (67%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L +V ++ER+ Q+E+ +++A++VSEKCI+ ++RP+T++ + +K F V+
Sbjct: 89 ILEKGDVQISDQERAVQLESTIREVASMVSEKCIHPISRRPYTMAQVRDAMKSAGFMVHP 148
Query: 438 NKNSKQQALE 447
+N KQQ L+
Sbjct: 149 TRNIKQQFLD 158
>gi|221060488|ref|XP_002260889.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
gi|193810963|emb|CAQ42861.1| hypothetical protein, conserved [Plasmodium knowlesi strain H]
Length = 663
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 128/225 (56%), Gaps = 48/225 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN IE
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNGIE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
LNI D+VLQ+H +FTNVSKG+ A K +L
Sbjct: 46 --------------------LNI-----------DDVLQSHLIFTNVSKGEIAKKSELNS 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F+++D EICK IL KG LQIS+KERS + +KD+ I+ E +N +T P + +MI
Sbjct: 75 CFHSDDNYEICKTILEKGTLQISNKERSIIKDKIYKDMIEILHEMSVNPQTGYPLSTNMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRV 315
E+ +K I +S+N++ ++K+QAL+V L + I+RA MR+++
Sbjct: 135 ESMVKNIGYSINIDDSAKKQALKVFDMLSKEYDDVIQRAFMRIQI 179
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 69/91 (75%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P NQ++ TNVAIV+ K GK+FEIACYKNK+I WRN IE +ID+VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGKKFEIACYKNKIIDWRNGIELNIDDVLQSHLIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG+ A K +L F+++D EICK IL K
Sbjct: 61 VSKGEIAKKSELNSCFHSDDNYEICKTILEK 91
>gi|156847998|ref|XP_001646882.1| hypothetical protein Kpol_2002p96 [Vanderwaltozyma polyspora DSM
70294]
gi|156117563|gb|EDO19024.1| hypothetical protein Kpol_2002p96 [Vanderwaltozyma polyspora DSM
70294]
Length = 248
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 152/291 (52%), Gaps = 63/291 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+KK KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSMVRLKKNKKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H +F NVSKG A+KEDL+ F T D
Sbjct: 45 -------------------------KDLDEVLQIHQIFMNVSKGLVASKEDLQTCFGTND 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL KGE+Q+S+KER + ++ TI+S KCIN ++K+ + +MI L +
Sbjct: 80 VDLIIKEILNKGEIQLSEKERQLMLNKINNEMLTIISTKCINPKSKKRYPPTMIHKALNE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEV---SAGVKDVKKLKEKLVK 333
+ FS VNK +K QALE I L Q + I RA+M++++ + + G D +L EK+ K
Sbjct: 140 LKFSPVVNKPAKLQALEAIKLLISSQIIPIVRAKMKIKIVLNQEAQGSGDSTELVEKITK 199
Query: 334 C---ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE W+ G LIDP YR++ + G GT+++L++
Sbjct: 200 FFIKPVIVEEPIWTCTG-----LIDPVSYRDLVSI----CNGNGTIQVLDM 241
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 63/85 (74%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+KK KRFE+ACY+NKV +R IEKD+DEVLQ H +F NVSKG
Sbjct: 6 PSGQIKLTNVSMVRLKKNKKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQIFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL+ F T D I K IL K
Sbjct: 66 ASKEDLQTCFGTNDVDLIIKEILNK 90
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER + ++ TI+S KCIN ++K+ + +MI L ++ FS
Sbjct: 86 EILNKGEIQLSEKERQLMLNKINNEMLTIISTKCINPKSKKRYPPTMIHKALNELKFSPV 145
Query: 437 VNKNSKQQALE 447
VNK +K QALE
Sbjct: 146 VNKPAKLQALE 156
>gi|452002307|gb|EMD94765.1| hypothetical protein COCHEDRAFT_1222065 [Cochliobolus
heterostrophus C5]
Length = 301
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 160/337 (47%), Gaps = 97/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+ VLQ VF NVSK
Sbjct: 5 IIKPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNKVEKDLSNVLQIENVFLNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A K DL+KAF L
Sbjct: 65 GQVAPKTDLEKAFPNKSLE----------------------------------------- 83
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI IL GELQ+ +KER++++E ++ IVS K ++ +TKR +T MIE
Sbjct: 84 -----EIIIDILDHGELQVGEKERNAELERTKNEVIDIVSGKLVDPKTKRVYTTGMIEKA 138
Query: 276 LKQIHFS-------------------------------VNVNKNSKQQALEVIPTL--KQ 302
L Q+ + V NK++K QAL + L Q
Sbjct: 139 LDQLSSAAASQQSEKEKGEAKEDGDEKAKAKELPKWTGVVTNKSAKSQALFAMKALIAHQ 198
Query: 303 CMSIERAQMRVRV---------------EVSAGVKD---VKKLKEKLVKCATSVENEEWS 344
+ + R QM++R+ + AG +D V +K+ ++ VE+++
Sbjct: 199 PIPVARMQMKLRITCPTSVLKQSIKTAPKAQAGAEDKGTVGTVKDAILGLMEKVESQDTV 258
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + LI+PG ++ ++EL+ +T+G+G +E+L +
Sbjct: 259 GAEWEAVGLIEPGAFKGLNELIEGQTKGRGNVEVLEM 295
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 63/86 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WRN +EKD+ VLQ VF NVSK
Sbjct: 5 IIKPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRNKVEKDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A K DL+KAF + EI IL
Sbjct: 65 GQVAPKTDLEKAFPNKSLEEIIIDIL 90
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 43/70 (61%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+++L+ E+ GE+ER++++E ++ IVS K ++ +TKR +T MIE L Q+ +
Sbjct: 87 IDILDHGELQVGEKERNAELERTKNEVIDIVSGKLVDPKTKRVYTTGMIEKALDQLSSAA 146
Query: 436 NVNKNSKQQA 445
++ K++
Sbjct: 147 ASQQSEKEKG 156
>gi|76364273|gb|ABA41650.1| Shwachman-Bodian-Diamond protein-like protein, partial [Trimastix
pyriformis]
Length = 221
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 141/263 (53%), Gaps = 49/263 (18%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
+T+V++VR+KK GKRFE+ACYKNKV WR
Sbjct: 1 LTDVSVVRLKKCGKRFEVACYKNKVHDWRTG----------------------------- 31
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
REKDI+EVL+ H VFTNVSK A K+DL+ F + DQ +I
Sbjct: 32 -----------------REKDIEEVLRRHVVFTNVSKAVVAKKQDLQDCFGSTDQEKIVL 74
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL GE+Q + ER + + F+D+ATI++ KC++ +T+R F + ++E L++I F +
Sbjct: 75 EILNTGEVQAGELERENIFQAAFRDMATIIAAKCVHAKTRRAFPIPLVEQALREIRFPFD 134
Query: 285 VNKNSKQQALEVIPTLKQC-MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW 343
+KN K+QAL+ I L++ + ERA+M VR+ + + ++ ++ + E
Sbjct: 135 PSKNPKKQALDGIRALREAGLPFERAEMLVRLRLPLDAALL--IRGQIEGHIRRIRAEST 192
Query: 344 SGGGLLLICLIDPGKYREIDELV 366
+ L++ CLIDPG +R ++ +V
Sbjct: 193 ADQQLVMDCLIDPGSFRLVESIV 215
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 57/77 (74%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
+T+V++VR+KK GKRFE+ACYKNKV WR EKDI+EVL+ H VFTNVSK A K+DL
Sbjct: 1 LTDVSVVRLKKCGKRFEVACYKNKVHDWRTGREKDIEEVLRRHVVFTNVSKAVVAKKQDL 60
Query: 73 KKAFNTEDQTEICKLIL 89
+ F + DQ +I IL
Sbjct: 61 QDCFGSTDQEKIVLEIL 77
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 375 TLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 434
LE+LN EV GE ER + + F+D+ATI++ KC++ +T+R F + ++E L++I F
Sbjct: 73 VLEILNTGEVQAGELERENIFQAAFRDMATIIAAKCVHAKTRRAFPIPLVEQALREIRFP 132
Query: 435 VNVNKNSKQQALE 447
+ +KN K+QAL+
Sbjct: 133 FDPSKNPKKQALD 145
>gi|365759527|gb|EHN01310.1| Sdo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841680|gb|EJT44031.1| SDO1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 250
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 153/292 (52%), Gaps = 65/292 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ K I+ KGE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L++
Sbjct: 80 IDDVIKEIMHKGEIQLSEKERQLMVNKVNNELLTIISAKCINPISKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ FS +NK +K QALE I L KQ + I RA+M+V+V + K K+ EK+ T
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVVIGEPCKQ-SKIIEKISTLIT 198
Query: 337 SVENEE-------WSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ E W+ G LIDP YR++ T +G +++L++
Sbjct: 199 TSPQEPTDPELDTWTCIG-----LIDPVNYRDL----MTLCDKRGIVQVLDM 241
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVKLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ K I+ K
Sbjct: 66 ANKEDLQKCFGTTNIDDVIKEIMHK 90
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TI+S KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMVNKVNNELLTIISAKCINPISKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|323347510|gb|EGA81778.1| Sdo1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 223
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 144/269 (53%), Gaps = 61/269 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG ANKEDL+K F T +
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVANKEDLQKCFGTTN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
++ + I+ KGE+Q+S+KER + ++ TIVS KCIN +K+ + +MI L++
Sbjct: 80 VDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-- 334
+ FS +NK +K QALE I L KQ + I RA+M+V+V +S + +L EK+ K
Sbjct: 140 LKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPSRQ-PELIEKISKLIA 198
Query: 335 -----ATSVENEEWSGGGLLLICLIDPGK 358
+T E + W+ G LIDP K
Sbjct: 199 SSPGESTKPELDPWTCTG-----LIDPXK 222
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 66/85 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++VR+KKA KRFE+ACY+NKV +R IEKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
ANKEDL+K F T + ++ + I+ K
Sbjct: 66 ANKEDLQKCFGTTNVDDVIEEIMHK 90
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TIVS KCIN +K+ + +MI L+++ FS
Sbjct: 86 EIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKLQALE 156
>gi|410083487|ref|XP_003959321.1| hypothetical protein KAFR_0J01190 [Kazachstania africana CBS 2517]
gi|372465912|emb|CCF60186.1| hypothetical protein KAFR_0J01190 [Kazachstania africana CBS 2517]
Length = 245
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 154/285 (54%), Gaps = 54/285 (18%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KK KRFEIACY+NKV +R IE
Sbjct: 6 PSGQIKLTNVSLVKLKKQKKRFEIACYQNKVQDYRKGIE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KDIDEVLQ H VF NVSKG A+KEDL+K F + +
Sbjct: 45 -------------------------KDIDEVLQIHQVFMNVSKGLVASKEDLQKCFGSVN 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+I K IL KGE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L++
Sbjct: 80 IDDIIKEILNKGEIQLSEKERQLMLNKINNEMLTIISAKCINPVSKKRYPPTMIHKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ F+ + K +K QALE I L KQ + I RA+M+V+V V++ ++ ++ EKL + +
Sbjct: 140 LKFNPVIGKPAKLQALEAIKILIAKQIIPIVRARMKVKVLVTS--QENSEVIEKLTQMIS 197
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
N + I LIDP YR++ L G GTL++L++
Sbjct: 198 GPNNAGNASSTWERIGLIDPVNYRDLVSL----CNGNGTLQVLDM 238
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KK KRFEIACY+NKV +R IEKDIDEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVKLKKQKKRFEIACYQNKVQDYRKGIEKDIDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL+K F + + +I K IL K
Sbjct: 66 ASKEDLQKCFGSVNIDDIIKEILNK 90
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+LN E+ E+ER + ++ TI+S KCIN +K+ + +MI L+++ F+
Sbjct: 86 EILNKGEIQLSEKERQLMLNKINNEMLTIISAKCINPVSKKRYPPTMIHKALQELKFNPV 145
Query: 437 VNKNSKQQALE 447
+ K +K QALE
Sbjct: 146 IGKPAKLQALE 156
>gi|255711314|ref|XP_002551940.1| KLTH0B03476p [Lachancea thermotolerans]
gi|238933318|emb|CAR21502.1| KLTH0B03476p [Lachancea thermotolerans CBS 6340]
Length = 242
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 154/292 (52%), Gaps = 63/292 (21%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV+IV++KK K+FEIACY+NKV +R +E
Sbjct: 5 PSGQIKLTNVSIVKLKKGKKKFEIACYQNKVQDFRKGVE--------------------- 43
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKGQ A+KEDL K+F +D
Sbjct: 44 -------------------------KDVDEVLQIHQVFINVSKGQVASKEDLTKSFEAKD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL +GE+Q+S+KER + ++ TIVS KCIN ++K+ + +MI L +
Sbjct: 79 LDTIIKEILTRGEIQLSEKERQLMLNKINNEMLTIVSAKCINPKSKKRYPPTMIHKALVE 138
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ F+V +NK +K QALE I L KQ + I RA+MR++V++ D L EKL+
Sbjct: 139 LKFNVVLNKPAKLQALEAIKVLVAKQIIPIVRARMRIKVDLQKPGND--DLIEKLLPLIK 196
Query: 337 SVENEE----WSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEV 384
S E E W G LIDP YR I E +GTL++L++ V
Sbjct: 197 SPELTEAESSWCCAG-----LIDPVSYRTIVE----ACNNRGTLQVLDMAVV 239
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 65/85 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV+IV++KK K+FEIACY+NKV +R +EKD+DEVLQ H VF NVSKGQ
Sbjct: 5 PSGQIKLTNVSIVKLKKGKKKFEIACYQNKVQDFRKGVEKDVDEVLQIHQVFINVSKGQV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL K+F +D I K IL +
Sbjct: 65 ASKEDLTKSFEAKDLDTIIKEILTR 89
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER + ++ TIVS KCIN ++K+ + +MI L ++ F+V
Sbjct: 85 EILTRGEIQLSEKERQLMLNKINNEMLTIVSAKCINPKSKKRYPPTMIHKALVELKFNVV 144
Query: 437 VNKNSKQQALEEDKT 451
+NK +K QALE K
Sbjct: 145 LNKPAKLQALEAIKV 159
>gi|365990385|ref|XP_003672022.1| hypothetical protein NDAI_0I02100 [Naumovozyma dairenensis CBS 421]
gi|343770796|emb|CCD26779.1| hypothetical protein NDAI_0I02100 [Naumovozyma dairenensis CBS 421]
Length = 251
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 146/276 (52%), Gaps = 55/276 (19%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KK KRFEIACY+NKV +R +E
Sbjct: 6 PSGQIKLTNVSLVKLKKERKRFEIACYQNKVQDYRKGVE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ H VF NVSKG A+KEDL+K F T D
Sbjct: 45 -------------------------KDLDEVLQIHQVFMNVSKGLVASKEDLQKCFGTTD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+ K I++KGE+Q+S+KER + ++ TI+S KC+N +K+ + +MI L +
Sbjct: 80 IDAVIKEIMIKGEIQLSEKERQLMLNKINNEMLTIISAKCVNPVSKKRYPPTMIHKALNE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ FS VNK +K QALE I L KQ + I RA+M+V++ + D +LKEKL K
Sbjct: 140 LKFSPVVNKPAKLQALEAIKLLVNKQIIPISRAKMKVKIILKDTNHD-SELKEKLNKIVL 198
Query: 337 S-----VENEEWSGGGLLLICLIDPGKYREIDELVR 367
+E E + +L LIDP YRE+ L +
Sbjct: 199 QGPTNKLEPAEVTETSTIL-GLIDPVSYRELVTLAK 233
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 65/85 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KK KRFEIACY+NKV +R +EKD+DEVLQ H VF NVSKG
Sbjct: 6 PSGQIKLTNVSLVKLKKERKRFEIACYQNKVQDYRKGVEKDLDEVLQIHQVFMNVSKGLV 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A+KEDL+K F T D + K I++K
Sbjct: 66 ASKEDLQKCFGTTDIDAVIKEIMIK 90
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 383 EVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSK 442
E+ E+ER + ++ TI+S KC+N +K+ + +MI L ++ FS VNK +K
Sbjct: 92 EIQLSEKERQLMLNKINNEMLTIISAKCVNPVSKKRYPPTMIHKALNELKFSPVVNKPAK 151
Query: 443 QQALE 447
QALE
Sbjct: 152 LQALE 156
>gi|156086122|ref|XP_001610470.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797723|gb|EDO06902.1| conserved hypothetical protein [Babesia bovis]
Length = 393
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 130/233 (55%), Gaps = 48/233 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P Q+R+TNVA VR+K GK+FEIACYKNKV++WR+ +E
Sbjct: 1 MCGLFQPIGQVRLTNVATVRLKTGGKKFEIACYKNKVVNWRSGVET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DI EVLQT +FT+++KG+ A ++L +
Sbjct: 47 --------------------------------DIQEVLQTPCIFTSITKGKLAKNDELLE 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T+D ICK IL KGE+Q+S +ER+ ++ FKD+ TI+SE IN +T R T ++I
Sbjct: 75 AFGTKDIDTICKQILDKGEMQVSKEERNQMLQAMFKDVVTILSELAINPKTGRALTSTLI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKD 323
E LK FSV++ + +K+QAL+ + L+Q I R+QMR+++ + +D
Sbjct: 135 ENTLKSSAFSVSLREPAKKQALKALAHLQQLYPNEIARSQMRLKITCAMNQRD 187
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 68/91 (74%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P Q+R+TNVA VR+K GK+FEIACYKNKV++WR+ +E DI EVLQT +FT+
Sbjct: 1 MCGLFQPIGQVRLTNVATVRLKTGGKKFEIACYKNKVVNWRSGVETDIQEVLQTPCIFTS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
++KG+ A ++L +AF T+D ICK IL K
Sbjct: 61 ITKGKLAKNDELLEAFGTKDIDTICKQILDK 91
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 357 GKYREIDELVRT-ETRGQGTL--ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINT 413
GK + DEL+ T+ T+ ++L+ E+ +EER+ ++ FKD+ TI+SE IN
Sbjct: 64 GKLAKNDELLEAFGTKDIDTICKQILDKGEMQVSKEERNQMLQAMFKDVVTILSELAINP 123
Query: 414 ETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQAL 446
+T R T ++IE LK FSV++ + +K+QAL
Sbjct: 124 KTGRALTSTLIENTLKSSAFSVSLREPAKKQAL 156
>gi|402086477|gb|EJT81375.1| shwachman-Bodian-Diamond syndrome protein [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 317
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 162/358 (45%), Gaps = 111/358 (31%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNVA+VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QISQPSNQIKLTNVALVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A DL KAF R+ + +V+
Sbjct: 64 KGQTAPSADLAKAFG------------RDVPVADVILE---------------------- 89
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
IL KGELQ+ +KER++Q+E ++ IV+ K ++ TKR +T SMI+
Sbjct: 90 -----------ILNKGELQVGEKERAAQLERVHNEVVGIVASKLVDPRTKRVYTTSMIDK 138
Query: 275 GL--------------------------------------KQIHFSVNVNKNSKQQALEV 296
L K + ++ K++K QALE
Sbjct: 139 ALDMLTSQAHAQRASNAEDSGGGGGAAEDPAAAAAAPAVHKPVWTGMSTTKSAKSQALEA 198
Query: 297 IPTL--KQCMSIERAQMRVRVEVSAGV--------------------------KDVKKLK 328
+ L Q + I RA+MR+R+ S V K +K
Sbjct: 199 MKALIAHQPIPISRARMRLRITCSTNVLKQSVKTSAAAPKASVSNDADGADQPKAPGTVK 258
Query: 329 EKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTE 386
+K++ VEN++ G ++ ++PG ++ + + + ET+GQG +E+L + V E
Sbjct: 259 DKILSYIEQVENQDVIGSEWEVVGFVEPGAFKALSDFLGNETKGQGRVEVLEMAVVHE 316
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNVA+VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QISQPSNQIKLTNVALVRLKKGKKRFELACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFN 77
KGQ A DL KAF
Sbjct: 64 KGQTAPSADLAKAFG 78
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+LN E+ GE+ER++Q+E ++ IV+ K ++ TKR +T SMI+ L +
Sbjct: 88 LEILNKGELQVGEKERAAQLERVHNEVVGIVASKLVDPRTKRVYTTSMIDKALDMLTSQA 147
Query: 436 NVNKNS 441
+ + S
Sbjct: 148 HAQRAS 153
>gi|50286263|ref|XP_445560.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524865|emb|CAG58471.1| unnamed protein product [Candida glabrata]
Length = 246
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 156/294 (53%), Gaps = 60/294 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+ QI++TNV+IV++K+ KRFE+ACY+NKV +R +E
Sbjct: 1 MGVINQPSGQIKLTNVSIVKLKRNKKRFEVACYQNKVQDYRKGVE--------------- 45
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
K++DEVLQ H VFTNVSKG A KEDL+K
Sbjct: 46 -------------------------------KELDEVLQIHQVFTNVSKGLVAPKEDLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T D + K +L KGE+Q+S+KER I ++ TI+S KCIN ++K+ + +MI
Sbjct: 75 AFGTTDVDLVIKEVLSKGEIQLSEKERQLMINKINNEMLTIISAKCINPQSKKRYPPTMI 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVS--AGVKDVKKLK 328
L+++ F+ +NK +K QAL+ I L Q + I RA+M+V++ ++ + +D+ +
Sbjct: 135 HKALQELKFTPVINKPAKTQALDAIRLLVSSQIIPITRAKMKVKLTINDKSTHEDIIQKM 194
Query: 329 EKLVKCATSVENEE-WSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
EKL + + + W G LIDP YR I E + GT+++L++
Sbjct: 195 EKLFTDSEFTQTDSAWIASG-----LIDPVSYRYIVE----SAKDIGTVQVLDM 239
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 67/91 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+ QI++TNV+IV++K+ KRFE+ACY+NKV +R +EK++DEVLQ H VFTN
Sbjct: 1 MGVINQPSGQIKLTNVSIVKLKRNKKRFEVACYQNKVQDYRKGVEKELDEVLQIHQVFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
VSKG A KEDL+KAF T D + K +L K
Sbjct: 61 VSKGLVAPKEDLQKAFGTTDVDLVIKEVLSK 91
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER I ++ TI+S KCIN ++K+ + +MI L+++ F+
Sbjct: 87 EVLSKGEIQLSEKERQLMINKINNEMLTIISAKCINPQSKKRYPPTMIHKALQELKFTPV 146
Query: 437 VNKNSKQQALE 447
+NK +K QAL+
Sbjct: 147 INKPAKTQALD 157
>gi|429328484|gb|AFZ80244.1| hypothetical protein BEWA_030970 [Babesia equi]
Length = 391
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 155/321 (48%), Gaps = 81/321 (25%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P Q+R+TNVA VR+K +RFEIACY+NKV++WR+ IE
Sbjct: 1 MCGLFQPIGQVRLTNVATVRLKVKDQRFEIACYRNKVVNWRSGIET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DI EVLQ +FT++SKG+ A + L K
Sbjct: 47 --------------------------------DIQEVLQCPYIFTSISKGKLAKNDQLIK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNT D ICK IL KGE Q+S +ER+ +E+ FKD+ +I+ E IN T P T +++
Sbjct: 75 AFNTTDIKIICKQILDKGEFQVSKEERNQLLESTFKDVVSILHEVAINPNTGHPLTHTIL 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVE-------------- 316
E LK FSV++N+ +K+QAL+ + L++ I R+QMR+R+
Sbjct: 135 ENALKSSGFSVSLNEPTKKQALKALTILQKRYPNDIARSQMRLRITCLSKQRSTVIEYLK 194
Query: 317 ----------VSAGVKDVKKLKEKL------VKCATSVENEEWSGGGLLLICLIDPGKYR 360
S+ DV+K E + K SV E+ + L L C P +R
Sbjct: 195 SNSAYIEQDCASSNGDDVEKKHENVDIDPNSEKTTKSVHLEDQTISILFLCC---PKLFR 251
Query: 361 EIDELVRTETRGQGTLELLNL 381
+ID V G+L+L++L
Sbjct: 252 DIDGFVNNTLDPPGSLQLVSL 272
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 65/91 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P Q+R+TNVA VR+K +RFEIACY+NKV++WR+ IE DI EVLQ +FT+
Sbjct: 1 MCGLFQPIGQVRLTNVATVRLKVKDQRFEIACYRNKVVNWRSGIETDIQEVLQCPYIFTS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
+SKG+ A + L KAFNT D ICK IL K
Sbjct: 61 ISKGKLAKNDQLIKAFNTTDIKIICKQILDK 91
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ E +EER+ +E+ FKD+ +I+ E IN T P T +++E LK FSV+
Sbjct: 87 QILDKGEFQVSKEERNQLLESTFKDVVSILHEVAINPNTGHPLTHTILENALKSSGFSVS 146
Query: 437 VNKNSKQQAL 446
+N+ +K+QAL
Sbjct: 147 LNEPTKKQAL 156
>gi|147799515|emb|CAN72873.1| hypothetical protein VITISV_030008 [Vitis vinifera]
Length = 250
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/189 (48%), Positives = 123/189 (65%), Gaps = 17/189 (8%)
Query: 179 TSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE-DQTEICK------------- 224
T +EKD+DEVLQ+H V++NVSKG A +DL+ AF E DQTEI
Sbjct: 6 TKRKEKDLDEVLQSHIVYSNVSKGVLAKSKDLEAAFGKERDQTEILLEVSKIHYHTFEYT 65
Query: 225 -LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 283
LIL KGELQ++ KER SQ+ +QF+DIATIV +K IN ET+RP+T SMIE + +IHFSV
Sbjct: 66 ILILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTSSMIERLMHEIHFSV 125
Query: 284 NVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW 343
+ N +SK+QALEVI L++ I+R MR+R+ V ++ L EKL S+ +++
Sbjct: 126 DPNSSSKKQALEVIRELQKHFPIKRCPMRLRLTVPQ--QNFSSLLEKLNVWNASIVSKDE 183
Query: 344 SGGGLLLIC 352
SGG L + C
Sbjct: 184 SGGQLSIAC 192
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 375 TLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 434
T+ +L+ E+ +ER SQ+ +QF+DIATIV +K IN ET+RP+T SMIE + +IHFS
Sbjct: 65 TILILDKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTSSMIERLMHEIHFS 124
Query: 435 VNVNKNSKQQALE 447
V+ N +SK+QALE
Sbjct: 125 VDPNSSSKKQALE 137
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 6/78 (7%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE-DQTEICKLILMKDMSKIFTPTNQI 103
EKD+DEVLQ+H V++NVSKG A +DL+ AF E DQTEI + ++SKI T +
Sbjct: 10 EKDLDEVLQSHIVYSNVSKGVLAKSKDLEAAFGKERDQTEI-----LLEVSKIHYHTFEY 64
Query: 104 RMTNVAIVRMKKAGKRFE 121
+ + ++ AGK E
Sbjct: 65 TILILDKGELQVAGKERE 82
>gi|340519968|gb|EGR50205.1| predicted protein [Trichoderma reesei QM6a]
Length = 315
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 162/351 (46%), Gaps = 109/351 (31%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A KEDL+KAF K
Sbjct: 64 KGQTAPKEDLEKAFG------------------------------------------KGK 81
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
+T+D I IL KGELQ+ DKER++Q+E ++ +IV K ++ TKR +T MIE
Sbjct: 82 STDD---IVLEILKKGELQVGDKERAAQLERVHNEVISIVVSKLVDPRTKRVYTPGMIEK 138
Query: 275 GL----KQIH------------------------------------FSVNVNKNSKQQAL 294
L Q H V K++K QAL
Sbjct: 139 ALDMLSSQAHQNNNNTEKEKSTDSGAATPTTGEAGEAKPKTKEHTWTGVTTTKSAKSQAL 198
Query: 295 EVIPTL--KQCMSIERAQMRVRV----------------------EVSAGVKDVKKLKEK 330
+ + L Q + + RA+M++RV + S K +K++
Sbjct: 199 DAMKALIAHQPIPVARARMKLRVTCPTNVLKQAVKAPKAAAKEDEDGSGEAKAPGTVKDR 258
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++ VE+++ G ++ ++PG ++ + + + +T+GQG +E+L++
Sbjct: 259 ILGYVEQVESQDVMGSEWEVVGFVEPGAFKALSDFIGNDTKGQGRVEVLDM 309
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 66/89 (74%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A KEDL+KAF T+ L ++K
Sbjct: 64 KGQTAPKEDLEKAFGKGKSTDDIVLEILK 92
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ G++ER++Q+E ++ +IV K ++ TK
Sbjct: 78 GKGKSTDDIV---------LEILKKGELQVGDKERAAQLERVHNEVISIVVSKLVDPRTK 128
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQ 444
R +T MIE L + + N N+ ++
Sbjct: 129 RVYTPGMIEKALDMLSSQAHQNNNNTEK 156
>gi|124808297|ref|XP_001348280.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23497171|gb|AAN36719.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 638
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/230 (38%), Positives = 129/230 (56%), Gaps = 48/230 (20%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQ++ TNVAIV+ K GK+FEIACYKNK+I W+N E
Sbjct: 5 LFQPINQVKFTNVAIVKYKYKGKKFEIACYKNKIIDWKNGTE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
LNI D+VLQ+H +FTN+SKG+ A K +L F
Sbjct: 47 -----------------LNI-----------DDVLQSHLIFTNISKGEIAKKSELNSCFQ 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
++D +ICK IL KG LQIS+KER+ E +KD+ I+ E +N +T P + +MIE+
Sbjct: 79 SDDNYKICKTILEKGTLQISNKERAILKEKIYKDMIEILHEMSVNPQTGYPISTNMIESM 138
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVKD 323
+K I +S+N++ ++K+QAL+V TL + I+RA MR+++ +KD
Sbjct: 139 VKNIGYSINIDDSAKKQALKVFDTLSKEYDDIIQRAFMRIQIIYDDIIKD 188
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/88 (55%), Positives = 66/88 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQ++ TNVAIV+ K GK+FEIACYKNK+I W+N E +ID+VLQ+H +FTN+SK
Sbjct: 5 LFQPINQVKFTNVAIVKYKYKGKKFEIACYKNKIIDWKNGTELNIDDVLQSHLIFTNISK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A K +L F ++D +ICK IL K
Sbjct: 65 GEIAKKSELNSCFQSDDNYKICKTILEK 92
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 8/74 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+GTL++ N +ER+ E +KD+ I+ E +N +T P + +MIE+ +K I
Sbjct: 92 KGTLQISN--------KERAILKEKIYKDMIEILHEMSVNPQTGYPISTNMIESMVKNIG 143
Query: 433 FSVNVNKNSKQQAL 446
+S+N++ ++K+QAL
Sbjct: 144 YSINIDDSAKKQAL 157
>gi|358391392|gb|EHK40796.1| hypothetical protein TRIATDRAFT_31787 [Trichoderma atroviride IMI
206040]
Length = 306
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 163/345 (47%), Gaps = 101/345 (29%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ T P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRQITLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKGQ A KEDL+KAF KG++ +
Sbjct: 61 NVSKGQTAPKEDLEKAFG-------------------------------KGKSTD----- 84
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
+I IL KGELQ+ +KER++Q+E ++ +IV K ++ TKR +T M
Sbjct: 85 ---------DIVLEILKKGELQVGEKERAAQLERVHNEVISIVVSKLVDPRTKRVYTPGM 135
Query: 272 IEAGL----KQIH------------------------------FSVNVNKNSKQQALEVI 297
IE L Q H V K++K QAL+ +
Sbjct: 136 IEKALDMLSSQAHTGEKTTDSGTATPTTTEAGEAKPKTKEHTWTGVVTTKSAKSQALDAM 195
Query: 298 PTLK--QCMSIERAQMRVRV-------------------EVSAGVKDVKKLKEKLVKCAT 336
L Q + + RA+M++R+ E K +K++++
Sbjct: 196 KALIAFQPIPVARARMKLRITCPTNILKQAIKAPKTASKEEDGETKAPGTVKDRILGYIE 255
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VEN++ G ++ +PG ++ + + + ET+GQG +E+L++
Sbjct: 256 EVENQDVMGSEWEVVGFAEPGAFKALSDFIGNETKGQGRVEVLDM 300
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ T P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRQITLPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ A KEDL+KAF T+ L ++K
Sbjct: 61 NVSKGQTAPKEDLEKAFGKGKSTDDIVLEILK 92
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ GE+ER++Q+E ++ +IV K ++ TK
Sbjct: 78 GKGKSTDDIV---------LEILKKGELQVGEKERAAQLERVHNEVISIVVSKLVDPRTK 128
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 129 RVYTPGMIEKAL 140
>gi|226487060|emb|CAX75395.1| Shwachman-Bodian-Diamond syndrome protein homolog [Schistosoma
japonicum]
Length = 155
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 112/197 (56%), Gaps = 46/197 (23%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV WR+ +E ++
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGSRYELACYPNKVQPWRDKLETNL--------------- 47
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
+EVLQ H VFTNVSKGQ ANK+++ F
Sbjct: 48 -------------------------------NEVLQAHCVFTNVSKGQFANKKEMFAHFR 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
TED+ EI K IL GELQ+++KER + F+D+A IVSE+C+N E R +TV+M+E
Sbjct: 77 TEDEREIIKSILEHGELQLTEKERLVGQQALFRDVAKIVSERCVNPENNRAYTVTMVEKM 136
Query: 276 LKQIHFSVNVNKNSKQQ 292
+K H S+ NK++KQ
Sbjct: 137 MKDCHISLKANKSAKQH 153
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTPTNQ R+TNV++VR+KK G R+E+ACY NKV WR+ +E +++EVLQ H VFTNVSK
Sbjct: 3 LFTPTNQKRLTNVSVVRLKKGGSRYELACYPNKVQPWRDKLETNLNEVLQAHCVFTNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ ANK+++ F TED+ EI K IL
Sbjct: 63 GQFANKKEMFAHFRTEDEREIIKSIL 88
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 360 REIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPF 419
+E+ RTE + +L E+ E+ER + F+D+A IVSE+C+N E R +
Sbjct: 69 KEMFAHFRTEDEREIIKSILEHGELQLTEKERLVGQQALFRDVAKIVSERCVNPENNRAY 128
Query: 420 TVSMIEAGLKQIHFSVNVNKNSKQQ 444
TV+M+E +K H S+ NK++KQ
Sbjct: 129 TVTMVEKMMKDCHISLKANKSAKQH 153
>gi|326436308|gb|EGD81878.1| minichromosome maintenance protein 8 [Salpingoeca sp. ATCC 50818]
Length = 1051
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 116/164 (70%), Gaps = 2/164 (1%)
Query: 226 ILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 285
IL KGELQ+S +ER +++ ++FK++A+IVS+KCIN +TKRP+ + IE +K +HFSV
Sbjct: 888 ILAKGELQVSKEERDNELADKFKEVASIVSDKCINPDTKRPYVAAQIERAMKDLHFSVKP 947
Query: 286 NKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG 345
N +SK QAL+VI L++ + +ERAQM VRV + A ++ KK K + VE++E+ G
Sbjct: 948 NASSKSQALDVIRKLQETIPLERAQMTVRVVLPA--REAKKTKAAISGFFAEVESDEFEG 1005
Query: 346 GGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
L ++ +DPG YR IDE V TRG+GTLE+L++K V EG++
Sbjct: 1006 DELEIVAKVDPGAYRLIDEKVNELTRGKGTLEILSVKNVQEGDQ 1049
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 53/72 (73%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
L++L E+ +EER +++ ++FK++A+IVS+KCIN +TKRP+ + IE +K +HFSV
Sbjct: 886 LQILAKGELQVSKEERDNELADKFKEVASIVSDKCINPDTKRPYVAAQIERAMKDLHFSV 945
Query: 436 NVNKNSKQQALE 447
N +SK QAL+
Sbjct: 946 KPNASSKSQALD 957
>gi|400594815|gb|EJP62644.1| shwachman-Bodian-Diamond syndrome protein [Beauveria bassiana ARSEF
2860]
Length = 314
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 160/350 (45%), Gaps = 108/350 (30%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
KGQ A KEDL+KAF M
Sbjct: 64 KGQTAPKEDLEKAFGKKM------------------------------------------ 81
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
T+D I IL KGE Q+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE
Sbjct: 82 TTDD---IILEILKKGEQQVGEKERAAQLERINNEVISIVASKLVDPRTKRVYTSGMIEK 138
Query: 275 GL----KQIH------------------------------------FSVNVNKNSKQQAL 294
L Q H V+ K++K QAL
Sbjct: 139 ALDMLSSQAHQPSESKEKVDKSGSAAGTPATGEDGEARPRAKEHSWTGVSTTKSAKSQAL 198
Query: 295 EVIPTL--KQCMSIERAQMRVRVEVSAGV---------------------KDVKKLKEKL 331
E + L Q + + RA+MR+R+ V + +K+K+
Sbjct: 199 EAMKALVAHQPIPVARARMRLRISCGTSVLKQAAKQAAAAASKEEGGEQQQQKGTVKDKI 258
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ VE ++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 259 LSYIEQVETQDVMGAEWEVVGFVEPGAFKPLSDFIGNETKGQGRVEVLDM 308
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KGQ A KEDL+KAF + T+ L ++K
Sbjct: 64 KGQTAPKEDLEKAFGKKMTTDDIILEILK 92
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E GE+ER++Q+E ++ +IV+ K ++ TKR +T MIE L +
Sbjct: 88 LEILKKGEQQVGEKERAAQLERINNEVISIVASKLVDPRTKRVYTSGMIEKALDMLSSQA 147
Query: 436 NVNKNSKQQALEEDKTSGIYSS 457
+ SK++ + +G ++
Sbjct: 148 HQPSESKEKVDKSGSAAGTPAT 169
>gi|171686192|ref|XP_001908037.1| hypothetical protein [Podospora anserina S mat+]
gi|170943057|emb|CAP68710.1| unnamed protein product [Podospora anserina S mat+]
Length = 313
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 163/349 (46%), Gaps = 109/349 (31%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A +L KAF ++ +D+++
Sbjct: 63 GQTAPSAELAKAFGKDV------------SVDDIILE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ +KERS+Q+E ++ +V+ K ++ TKR +T S+IE
Sbjct: 88 ----------ILKKGEMQVGEKERSAQLERVHNEVMGMVASKLVDPRTKRVYTTSIIEKA 137
Query: 276 LKQ-----------------------------------------IHFSVNVNKNSKQQAL 294
L Q I V+ K++K QAL
Sbjct: 138 LDQLSSQAHQQSNNDKDKKEDGNSASGTPATGEVGESKPQAPKPIWKGVSATKSAKSQAL 197
Query: 295 EVIPTL--KQCMSIERAQMRVRV--------------EVSAGVKD-------VKKLKEKL 331
E + L Q + I RA+MRVRV + +AG +D +K+K+
Sbjct: 198 EAMKALVAHQPIPIARARMRVRVTCPTNVLKQSVKAPKAAAGKEDEDGEKKAPGTVKDKI 257
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
+ VEN++ G + ++PG ++++ + + ET+G+G +E+L+
Sbjct: 258 LSLFEQVENQDVMGSEWEAVGFVEPGIFKDLSDFIENETKGRGNVEVLD 306
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 56/74 (75%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 64 GQAANKEDLKKAFN 77
GQ A +L KAF
Sbjct: 63 GQTAPSAELAKAFG 76
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI---- 431
LE+L E+ GE+ERS+Q+E ++ +V+ K ++ TKR +T S+IE L Q+
Sbjct: 86 LEILKKGEMQVGEKERSAQLERVHNEVMGMVASKLVDPRTKRVYTTSIIEKALDQLSSQA 145
Query: 432 HFSVNVNKNSKQQA 445
H N +K+ K+
Sbjct: 146 HQQSNNDKDKKEDG 159
>gi|380493839|emb|CCF33587.1| hypothetical protein CH063_05748 [Colletotrichum higginsianum]
Length = 325
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 171/369 (46%), Gaps = 120/369 (32%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS++ P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRMINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFL 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKGQ A KEDL+KAF
Sbjct: 61 NVSKGQTAPKEDLEKAFG------------------------------------------ 78
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
KA +T+D I IL KGE+Q+ KER+ Q+E ++ IV+ + ++ TKR +T M
Sbjct: 79 KAKSTDD---IVLEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTKRVYTTGM 135
Query: 272 IEAGL-----------------------------------------KQIHFS-VNVNKNS 289
IE L K IH++ V K++
Sbjct: 136 IEKALDMLSSAAHGEEGGDAKKSGSKTASGAGTPAAGEDGDAKPREKGIHWTGVTTTKSA 195
Query: 290 KQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV--KDVKK------------------- 326
K QALE + L Q + ++RA+MR+RV + V + VK+
Sbjct: 196 KSQALEAMKALIAAQPIPVQRARMRLRVTCATSVLKQAVKEKPTAAKDKGKGGDNNNNDD 255
Query: 327 ---------LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
+K++++ VE+++ G ++ ++PG ++ + + + ET+G G +E
Sbjct: 256 DEPKQKPGTVKDRILGFVEQVESQDVLGSEWEVVGFVEPGAFKGLGDFIAGETKGMGRVE 315
Query: 378 LLNLKEVTE 386
+L++ + E
Sbjct: 316 VLDMAVIHE 324
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS++ P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRMINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFL 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ A KEDL+KAF T+ L ++K
Sbjct: 61 NVSKGQTAPKEDLEKAFGKAKSTDDIVLEILK 92
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ G +ER+ Q+E ++ IV+ + ++ TK
Sbjct: 78 GKAKSTDDIV---------LEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTK 128
Query: 417 RPFTVSMIEAGLKQIHFSVN 436
R +T MIE L + + +
Sbjct: 129 RVYTTGMIEKALDMLSSAAH 148
>gi|154316253|ref|XP_001557448.1| hypothetical protein BC1G_03712 [Botryotinia fuckeliana B05.10]
gi|347836383|emb|CCD50955.1| similar to ribosome maturation protein SBDS [Botryotinia
fuckeliana]
Length = 308
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 162/345 (46%), Gaps = 104/345 (30%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR KKA KRFEIACYKNKV+ WR+ EKDID VLQ VF NVS+
Sbjct: 3 INQPSNQIKLTNVSLVRYKKAKKRFEIACYKNKVLEWRSGNEKDIDNVLQIPNVFLNVSR 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A DL KAF D +Q
Sbjct: 63 GQTAPTADLAKAFGK----------------DTPVQ------------------------ 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+I IL KGELQ+ +KER +Q+E ++ +IV+ K ++ ++KR +T MIE
Sbjct: 83 -----DIILEILNKGELQVGEKERHAQLERVHNEVISIVASKLVDPKSKRVYTTGMIEKA 137
Query: 276 LKQI-------------------------------------HFSVNV--NKNSKQQALEV 296
L+ + H V K++K QALE
Sbjct: 138 LEMLSSQGSQAQEKEKNLGSETATPTTGEEGEAKPIPRAREHAWTGVVATKSAKSQALEA 197
Query: 297 IPTL--KQCMSIERAQMRVRVEV----------SAGVKDVKK--------LKEKLVKCAT 336
+ L Q + + RA+MR+RV + + G K V + +K++++
Sbjct: 198 MKALIAHQPIPVARARMRLRVTLPTKILKQVVKAPGPKSVDEGEGDKKETVKDRVLGYVE 257
Query: 337 SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
VE ++ G ++ ++PG ++ I + + TET+GQG +E+L++
Sbjct: 258 QVETQDVMGAEWEVVGFVEPGAFKGIGDFISTETKGQGRVEVLDM 302
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR KKA KRFEIACYKNKV+ WR+ EKDID VLQ VF NVS+
Sbjct: 3 INQPSNQIKLTNVSLVRYKKAKKRFEIACYKNKVLEWRSGNEKDIDNVLQIPNVFLNVSR 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A DL KAF + T + +IL
Sbjct: 63 GQTAPTADLAKAFGKD--TPVQDIIL 86
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
LE+LN E+ GE+ER +Q+E ++ +IV+ K ++ ++KR +T MIE L+ +
Sbjct: 86 LEILNKGELQVGEKERHAQLERVHNEVISIVASKLVDPKSKRVYTTGMIEKALEML 141
>gi|336268242|ref|XP_003348886.1| hypothetical protein SMAC_01910 [Sordaria macrospora k-hell]
gi|380094145|emb|CCC08362.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 315
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 166/352 (47%), Gaps = 111/352 (31%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A +L+KAF + T+V+
Sbjct: 63 GQTAPTAELQKAFGKD-------------------------TSVN--------------- 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+I IL KGE+Q+ +KERS+Q+E ++ +IV+ K ++ TK+ +T MI+
Sbjct: 83 -----DIILEILKKGEMQVGEKERSAQLERVHNEVVSIVASKLVDPRTKKVYTTGMIDKA 137
Query: 276 L----KQIH---------------------------------------FSVNVNKNSKQQ 292
L Q H V+ NK++K Q
Sbjct: 138 LDMLSSQAHQLQAQEKEKKETATSGVASPATGESGEAKPQPAKSLPIWTGVSTNKSAKSQ 197
Query: 293 ALEVIPTL--KQCMSIERAQMRVRVEVSA-----GVKDVKK----------------LKE 329
ALE + L Q + + RA+MR+R+ + GVK K +K+
Sbjct: 198 ALEAMKALVAHQPIPVARARMRLRITCTTNVLKQGVKTYKAEADKDGGEGEKKAPSTVKD 257
Query: 330 KLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
K++ VE+++ G L+ ++PG ++ + + + +ET+GQG +E+L++
Sbjct: 258 KILSFVEQVESQDVMGQEWELVGFVEPGAFKILGDFIGSETKGQGRVEVLDM 309
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/86 (56%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A +L+KAF + T + +IL
Sbjct: 63 GQTAPTAELQKAFGKD--TSVNDIIL 86
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ GE+ERS+Q+E ++ +IV+ K ++ TK+ +T MI+ L +
Sbjct: 86 LEILKKGEMQVGEKERSAQLERVHNEVVSIVASKLVDPRTKKVYTTGMIDKALDMLSSQA 145
Query: 436 NVNKNSKQQALEEDKTSGIYSS 457
+ ++++ +E TSG+ S
Sbjct: 146 H-QLQAQEKEKKETATSGVASP 166
>gi|361130050|gb|EHL01913.1| putative Ribosome maturation protein SDO1 [Glarea lozoyensis 74030]
Length = 300
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 104/338 (30%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KKA KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKAKKRFEIACYKNKVLEWRSGIETDLDNVLQIEGVFLNVSKGQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A DL KAF + KDI +L+
Sbjct: 66 APSADLAKAFGPKV---------PVKDI--ILE--------------------------- 87
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGELQ+ +KER++ +E ++ +IV+ K +N TKR +T MIE L+
Sbjct: 88 -------ILNKGELQVGEKERAAALERVHNEVVSIVASKLVNPSTKRVYTTGMIEKALEM 140
Query: 279 I------------------------------------HFSVNV--NKNSKQQALEVIPTL 300
+ H V K+SK QALE + L
Sbjct: 141 LSSQGSQAQQEKTAAAGSATGTAAAGEEGEAKPKVREHTWTGVVSTKSSKSQALEAMKAL 200
Query: 301 --KQCMSIERAQMRVRVEVSAGV--------------KDVKK-----LKEKLVKCATSVE 339
Q + + RA+M++RV +G+ +D + +K++++ VE
Sbjct: 201 IAHQPIPVARARMKLRVTCPSGILKFTTKAAGLVAPDQDAGEEKKGMIKDRILSFIEQVE 260
Query: 340 NEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
+++ G +I ++PG ++ + + + +ET+GQG +E
Sbjct: 261 SQDVVGSDWEVIGFVEPGAFKGLGDFIGSETKGQGRVE 298
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 56/72 (77%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KKA KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKAKKRFEIACYKNKVLEWRSGIETDLDNVLQIEGVFLNVSKGQT 65
Query: 67 ANKEDLKKAFNT 78
A DL KAF
Sbjct: 66 APSADLAKAFGP 77
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
LE+LN E+ GE+ER++ +E ++ +IV+ K +N TKR +T MIE L+ +
Sbjct: 86 LEILNKGELQVGEKERAAALERVHNEVVSIVASKLVNPSTKRVYTTGMIEKALEML 141
>gi|389625813|ref|XP_003710560.1| ribosome maturation protein [Magnaporthe oryzae 70-15]
gi|351650089|gb|EHA57948.1| shwachman-Bodian-Diamond syndrome protein [Magnaporthe oryzae
70-15]
gi|440467723|gb|ELQ36922.1| shwachman-Bodian-Diamond syndrome protein [Magnaporthe oryzae Y34]
gi|440480611|gb|ELQ61266.1| shwachman-Bodian-Diamond syndrome protein [Magnaporthe oryzae P131]
Length = 320
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 158/359 (44%), Gaps = 120/359 (33%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDI---DEVLQTHTVFTNVSKGQAANKEDLK 211
KGQ A DL KAF KD+ D +L+
Sbjct: 64 KGQTAPSADLAKAFG--------------KDVPVADVILE-------------------- 89
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
IL KG++Q+ DKER+ Q+E ++ IV+ K ++ TKR +T M
Sbjct: 90 --------------ILNKGDIQVGDKERAQQLERVHNEVVGIVASKLVDPRTKRVYTTGM 135
Query: 272 IEAGL----------------------------------------------------KQI 279
IE L K +
Sbjct: 136 IEKALDMLSSQAHTQQQQQQQQNKSAADGKTESSSGTATPTTAAASENGEAAGGKSSKLL 195
Query: 280 HFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV---------------K 322
V KN+K QALE + L Q + + RA+MR+R+ S V K
Sbjct: 196 WTGVVTTKNAKLQALEAMKALIAHQPIPVARARMRLRIACSTSVLKQAVKAPKTEDGEQK 255
Query: 323 DVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+K+K++ VEN++ G + ++PG ++ + + + ET+GQG +E+L++
Sbjct: 256 APGTVKDKILGYIEQVENQDVVGSEWEVTGFVEPGAFKAVSDFIGNETKGQGRVEVLDM 314
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF NVS
Sbjct: 4 QINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLNVS 63
Query: 63 KGQAANKEDLKKAFN 77
KGQ A DL KAF
Sbjct: 64 KGQTAPSADLAKAFG 78
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 428
LE+LN ++ G++ER+ Q+E ++ IV+ K ++ TKR +T MIE L
Sbjct: 88 LEILNKGDIQVGDKERAQQLERVHNEVVGIVASKLVDPRTKRVYTTGMIEKAL 140
>gi|403220718|dbj|BAM38851.1| uncharacterized protein TOT_010000318 [Theileria orientalis strain
Shintoku]
Length = 429
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 48/225 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P Q+R TNVA VR+K G+RFEIACYKNKV++WR+ +E
Sbjct: 1 MCVLFQPICQVRFTNVATVRLKVHGERFEIACYKNKVVNWRSGVET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
DI EVLQ+ +FTN+SKG+ AN L K
Sbjct: 47 --------------------------------DIQEVLQSPYIFTNISKGKLANNNQLMK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AFNT D +I K IL KGE Q+S +ER +E+ F+DI +I+ E +N T RP T +++
Sbjct: 75 AFNTTDINKITKQILDKGEFQVSSEERKQILESTFRDIVSILHELTVNPNTGRPLTRTLL 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRV 315
E LK FSV++N+ K+QAL+ + L K SI R +MR+++
Sbjct: 135 ENALKSSGFSVSLNEPPKKQALKAVNLLQKKYPESIARCKMRLQI 179
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P Q+R TNVA VR+K G+RFEIACYKNKV++WR+ +E DI EVLQ+ +FTN
Sbjct: 1 MCVLFQPICQVRFTNVATVRLKVHGERFEIACYKNKVVNWRSGVETDIQEVLQSPYIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
+SKG+ AN L KAFNT D +I K IL K
Sbjct: 61 ISKGKLANNNQLMKAFNTTDINKITKQILDK 91
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 375 TLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 434
T ++L+ E EER +E+ F+DI +I+ E +N T RP T +++E LK FS
Sbjct: 85 TKQILDKGEFQVSSEERKQILESTFRDIVSILHELTVNPNTGRPLTRTLLENALKSSGFS 144
Query: 435 VNVNKNSKQQAL 446
V++N+ K+QAL
Sbjct: 145 VSLNEPPKKQAL 156
>gi|85081815|ref|XP_956795.1| hypothetical protein NCU00476 [Neurospora crassa OR74A]
gi|28917872|gb|EAA27559.1| hypothetical protein NCU00476 [Neurospora crassa OR74A]
gi|336470023|gb|EGO58185.1| hypothetical protein NEUTE1DRAFT_82483 [Neurospora tetrasperma FGSC
2508]
gi|350290285|gb|EGZ71499.1| Shwachman-Bodian-diamond syndrome protein [Neurospora tetrasperma
FGSC 2509]
Length = 315
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 164/352 (46%), Gaps = 111/352 (31%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEVACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A +L+KAF + T+V+
Sbjct: 63 GQTAPTAELQKAFGKD-------------------------TSVN--------------- 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+I IL KGE+Q+ +KERS+Q+E ++ +IV+ K ++ TK+ +T MI+
Sbjct: 83 -----DIILEILKKGEMQVGEKERSAQLERVHNEVVSIVASKLVDPRTKKVYTTGMIDKA 137
Query: 276 L----KQIH---------------------------------------FSVNVNKNSKQQ 292
L Q H V+ NK++K Q
Sbjct: 138 LDMLSSQAHQLQEKEKEKKDAAASGTASPATGESGEAKPQPTKSLPIWTGVSTNKSAKSQ 197
Query: 293 ALEVIPTL--KQCMSIERAQMRVRVEVSAGV---------------------KDVKKLKE 329
ALE + L Q + + RA+MR+R+ + V K +K+
Sbjct: 198 ALEAMKALVAHQPIPVARARMRLRITCTTNVLKQAVKAPKGEANKDGEEGEKKAPGTVKD 257
Query: 330 KLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
K++ VE+++ G L+ ++PG ++ + + + +ET+GQG +E+L++
Sbjct: 258 KILSFVEQVESQDVMGQEWELVGFVEPGAFKILSDFIGSETKGQGRVEVLDM 309
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK KRFE+ACYKNKV+ WR+ IE D+D VLQ VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEVACYKNKVLEWRSGIETDLDNVLQIPNVFLNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A +L+KAF + T + +IL
Sbjct: 63 GQTAPTAELQKAFGKD--TSVNDIIL 86
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 428
LE+L E+ GE+ERS+Q+E ++ +IV+ K ++ TK+ +T MI+ L
Sbjct: 86 LEILKKGEMQVGEKERSAQLERVHNEVVSIVASKLVDPRTKKVYTTGMIDKAL 138
>gi|310798437|gb|EFQ33330.1| hypothetical protein GLRG_08474 [Glomerella graminicola M1.001]
Length = 325
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 120/369 (32%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS++ P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRMINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFL 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKGQ A KEDL+KAF
Sbjct: 61 NVSKGQTAPKEDLEKAFG------------------------------------------ 78
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
K+ +T+D I IL KGE+Q+ KER+ Q+E ++ IV+ + ++ TKR +T M
Sbjct: 79 KSKSTDD---IVLEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTKRVYTTGM 135
Query: 272 IEAGL------------------------------------------KQIHFS-VNVNKN 288
IE L K H++ V K+
Sbjct: 136 IEKALDMLSSAAHGEEGGDAKKAGGSKTASGAGTPAGGEEGDAKPRDKGFHWTGVTTTKS 195
Query: 289 SKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV--KDVKK------------------ 326
+K QALE + L Q + ++RA+MR+RV + V + VK+
Sbjct: 196 AKSQALEAMKALIAAQPIPVQRARMRLRVTCATSVLKQAVKEKPAAGKEKGKGGGGDDDG 255
Query: 327 ---------LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
+K++++ +E+++ G ++ ++PG ++ + + + ET+G G +E
Sbjct: 256 DEPKQKPGTVKDRILGFVEQIESQDVLGSEWEVVGFVEPGAFKGLSDFIAGETKGMGRVE 315
Query: 378 LLNLKEVTE 386
+L++ + E
Sbjct: 316 VLDMAVIHE 324
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 68/92 (73%), Gaps = 1/92 (1%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS++ P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRMINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVMEWRSGIETDLDNVLQIPNVFL 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ A KEDL+KAF T+ L ++K
Sbjct: 61 NVSKGQTAPKEDLEKAFGKSKSTDDIVLEILK 92
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ G +ER+ Q+E ++ IV+ + ++ TK
Sbjct: 78 GKSKSTDDIV---------LEILKKGEMQVGGKERAEQLERVHNEVIGIVASRLVDPRTK 128
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDKTS 452
R +T MIE L + + + + + KT+
Sbjct: 129 RVYTTGMIEKALDMLSSAAHGEEGGDAKKAGGSKTA 164
>gi|392575786|gb|EIW68918.1| hypothetical protein TREMEDRAFT_68862 [Tremella mesenterica DSM
1558]
Length = 241
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/283 (37%), Positives = 151/283 (53%), Gaps = 57/283 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P QI++TNV+IVRMKK GKRFEIACYKNKV +R+ IE
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYKNKVNEFRSGIEH-------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+ EVLQ VF+NV KG A KED +KAF T D
Sbjct: 45 --------------------------DLSEVLQIEQVFSNVPKGLVAKKEDWEKAFGTAD 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
T++ IL KGELQ+++ ERS Q+ + ++IAT+VSE I+ T R TVS+IE +
Sbjct: 79 LTKVIAEILQKGELQVNNLERSHQLSSLNREIATLVSEMTIDPTTSRKHTVSIIEKAMSD 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQ----CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC 334
+ FSV +K +K QAL++I L+ + R ++RV + G KD K+KE + +
Sbjct: 139 LGFSVKQDKPAKAQALDLIKRLQTDGILPIRRVRMRVRVVLPGKGGAKD--KIKEMVEEV 196
Query: 335 ATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
+ +EW I I+PG +R++ +LV ET+G+G +E
Sbjct: 197 EEEEQGQEWEA-----IVQIEPGAFRKLTDLVINETKGKGRVE 234
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 62/85 (72%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P QI++TNV+IVRMKK GKRFEIACYKNKV +R+ IE D+ EVLQ VF+NV KG
Sbjct: 5 PGTQIKLTNVSIVRMKKGGKRFEIACYKNKVNEFRSGIEHDLSEVLQIEQVFSNVPKGLV 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A KED +KAF T D T++ IL K
Sbjct: 65 AKKEDWEKAFGTADLTKVIAEILQK 89
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ ERS Q+ + ++IAT+VSE I+ T R TVS+IE + + FSV
Sbjct: 85 EILQKGELQVNNLERSHQLSSLNREIATLVSEMTIDPTTSRKHTVSIIEKAMSDLGFSVK 144
Query: 437 VNKNSKQQALE 447
+K +K QAL+
Sbjct: 145 QDKPAKAQALD 155
>gi|297288189|ref|XP_001085593.2| PREDICTED: ribosome maturation protein SBDS [Macaca mulatta]
Length = 183
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 67/86 (77%), Positives = 76/86 (88%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A KEDL AF T+DQTEICK L
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQAL 88
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 68/76 (89%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+AGKRFEIACYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 156 GQAANKEDLKKAFNTN 171
GQ A KEDL AF T+
Sbjct: 63 GQVAKKEDLISAFGTD 78
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%), Gaps = 3/99 (3%)
Query: 291 QQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLL 350
+QALEVI LK+ M IERA MR+R + V + KKLKEKL +E+E++ G L +
Sbjct: 85 KQALEVIKQLKEKMKIERAHMRLRFILP--VNEGKKLKEKLKPLIKVIESEDY-GQQLEI 141
Query: 351 ICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
+CLIDPG +REIDEL++ ET+G+G+LE+LNLK+V EG+E
Sbjct: 142 VCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDE 180
>gi|45184670|ref|NP_982388.1| AAL154Cp [Ashbya gossypii ATCC 10895]
gi|44980016|gb|AAS50212.1| AAL154Cp [Ashbya gossypii ATCC 10895]
gi|374105586|gb|AEY94497.1| FAAL154Cp [Ashbya gossypii FDAG1]
Length = 283
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 62/297 (20%)
Query: 91 KDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVF 150
+ M I P+ QI++TNV++VR+KK KRFE+ACY+NKV +R +E
Sbjct: 35 RPMGVINQPSGQIKLTNVSLVRLKKGKKRFEVACYQNKVQDYRRGVET------------ 82
Query: 151 TNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDL 210
D+DEVLQ + VF NVSKGQ A+ EDL
Sbjct: 83 ----------------------------------DLDEVLQINQVFLNVSKGQVASNEDL 108
Query: 211 KKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVS 270
AF T++Q + K IL +GE+Q+S+KER ++ T+VS KC+N +K+ + +
Sbjct: 109 NGAFGTKEQEVVIKEILSRGEIQLSEKERQQMHGKITNELLTLVSAKCVNPNSKKRYPPT 168
Query: 271 MIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK 328
MI L ++ F+V NK +K QALE I L +Q + I RA+MRV+ V +
Sbjct: 169 MIHKALAELKFNVVTNKPAKLQALEAIKLLVQRQIIPIARAKMRVK-----AVLPREGNA 223
Query: 329 EKLVKCAT---SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQ-GTLELLNL 381
E + + A+ + E S + LIDP YRE+ L G+ GTL++L++
Sbjct: 224 EAIAQAASLIAATEAAPESATTWMCTGLIDPMNYRELVTLC-----GKCGTLQVLDM 275
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 65/89 (73%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+ QI++TNV++VR+KK KRFE+ACY+NKV +R +E D+DEVLQ + VF N
Sbjct: 37 MGVINQPSGQIKLTNVSLVRLKKGKKRFEVACYQNKVQDYRRGVETDLDEVLQINQVFLN 96
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
VSKGQ A+ EDL AF T++Q + K IL
Sbjct: 97 VSKGQVASNEDLNGAFGTKEQEVVIKEIL 125
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L+ E+ E+ER ++ T+VS KC+N +K+ + +MI L ++ F+V
Sbjct: 123 EILSRGEIQLSEKERQQMHGKITNELLTLVSAKCVNPNSKKRYPPTMIHKALAELKFNVV 182
Query: 437 VNKNSKQQALEEDK 450
NK +K QALE K
Sbjct: 183 TNKPAKLQALEAIK 196
>gi|406867513|gb|EKD20551.1| UPF0023 family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 304
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 155/338 (45%), Gaps = 100/338 (29%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KKA KRFEIACYKNKV+ WR+ IE D+D VLQ ++VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKAKKRFEIACYKNKVLEWRSGIETDLDNVLQINSVFLNVSKGQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A DL KAF K N
Sbjct: 66 APSADLAKAFGP----------------------------------------KTPVN--- 82
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL-- 276
+I IL KGE+Q+ +KER +Q+E ++ IV+ K ++ +TKR +T MI+ L
Sbjct: 83 --DIILEILNKGEMQVGEKERHAQLERVHDEVVGIVASKLVDPKTKRVYTTGMIDKALDM 140
Query: 277 -------------------------------KQIHFSVNVNKNSKQQALEVIPTL--KQC 303
+ + V K++K QALE + L Q
Sbjct: 141 LSSQGSQAQNAGSGTGTPATGEDGEAKPKIKEHVWTGVVATKSAKSQALEAMKALIAHQP 200
Query: 304 MSIERAQMRVRVEVSAGV--------------------KDVKKLKEKLVKCATSVENEEW 343
+ + RA+MR+R+ + K +K++++ VE ++
Sbjct: 201 IPVARARMRLRITCPTSILKQAAKAAVPKPGDAEEGEEKTKGTVKDRILSYIEQVETQDV 260
Query: 344 SGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + ++PG ++ + + + ET+GQG +E+L++
Sbjct: 261 VGSEWEVTGFVEPGAFKGLGDFIGGETKGQGRVEVLDM 298
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KKA KRFEIACYKNKV+ WR+ IE D+D VLQ ++VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKAKKRFEIACYKNKVLEWRSGIETDLDNVLQINSVFLNVSKGQT 65
Query: 67 ANKEDLKKAFNTEDQTEICKLIL 89
A DL KAF +T + +IL
Sbjct: 66 APSADLAKAFGP--KTPVNDIIL 86
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 428
LE+LN E+ GE+ER +Q+E ++ IV+ K ++ +TKR +T MI+ L
Sbjct: 86 LEILNKGEMQVGEKERHAQLERVHDEVVGIVASKLVDPKTKRVYTTGMIDKAL 138
>gi|403218541|emb|CCK73031.1| hypothetical protein KNAG_0M01780 [Kazachstania naganishii CBS
8797]
Length = 251
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 146/292 (50%), Gaps = 65/292 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V++KK KRFEIACY+NKV + + K
Sbjct: 6 PSGQIKLTNVSLVKLKKGKKRFEIACYQNKVQDYEEGVRK-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+DEVLQ H VF NV KG A K+DL+K F T D
Sbjct: 46 --------------------------DLDEVLQIHQVFVNVPKGLIAPKDDLQKCFGTVD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+ IL KGE+Q+S+KER + ++ TI+S KCIN +K+ + +MI L Q
Sbjct: 80 VDTVIAEILTKGEIQLSEKERQLMLNKINNEMLTIISAKCINPVSKKRYPPTMIHKALVQ 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT 336
+ FS VNK +K QALE I L KQ + I RA+M+V+V V+ +L EK+ K
Sbjct: 140 LKFSPVVNKPAKLQALEAIKLLVAKQIIPIVRAKMKVKVTVADPAAK-SELVEKISKLVF 198
Query: 337 SVE-------NEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ E + W G LIDP YR++ +G+ TL++L++
Sbjct: 199 AEEGAMPTTSSSSWERTG-----LIDPVSYRDLVAC----CQGESTLQVLDM 241
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/85 (52%), Positives = 59/85 (69%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V++KK KRFEIACY+NKV + + KD+DEVLQ H VF NV KG
Sbjct: 6 PSGQIKLTNVSLVKLKKGKKRFEIACYQNKVQDYEEGVRKDLDEVLQIHQVFVNVPKGLI 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A K+DL+K F T D + IL K
Sbjct: 66 APKDDLQKCFGTVDVDTVIAEILTK 90
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER + ++ TI+S KCIN +K+ + +MI L Q+ FS
Sbjct: 86 EILTKGEIQLSEKERQLMLNKINNEMLTIISAKCINPVSKKRYPPTMIHKALVQLKFSPV 145
Query: 437 VNKNSKQQALE 447
VNK +K QALE
Sbjct: 146 VNKPAKLQALE 156
>gi|307111879|gb|EFN60113.1| hypothetical protein CHLNCDRAFT_11851, partial [Chlorella
variabilis]
Length = 223
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 57/280 (20%)
Query: 102 QIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANK 161
Q R+TN+A+VRMKK GKRFEIACYKNKV++WRN + ++ THT +
Sbjct: 1 QKRLTNIAVVRMKKHGKRFEIACYKNKVVNWRNG----VGTLVLTHTAACGGVPARLPAP 56
Query: 162 EDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTE 221
+ L A + D + ++ T+F +V+
Sbjct: 57 QQLHSAPLAPAPPRPCPALPQVSDKERRVELDTLFRDVA--------------------- 95
Query: 222 ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF 281
+++SEKCIN E+ RP+T+SM+E L+ +HF
Sbjct: 96 ------------------------------SVLSEKCINPESNRPYTLSMLERALRDVHF 125
Query: 282 SVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENE 341
SV+ + +K QALE +P LK IERA+MR+++ V KD +L E + + VE +
Sbjct: 126 SVDPKRPAKAQALEALPLLKSRFPIERARMRLKLAVPLSSKD--ELLELVRQQGGVVEEQ 183
Query: 342 EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ G L+CL++PG +R + ++T + G G E+L L
Sbjct: 184 DLIGSQFCLVCLVEPGTFRSVHSFIQTSSGGMGRFEVLAL 223
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 47/60 (78%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
++ER +++ F+D+A+++SEKCIN E+ RP+T+SM+E L+ +HFSV+ + +K QALE
Sbjct: 80 DKERRVELDTLFRDVASVLSEKCINPESNRPYTLSMLERALRDVHFSVDPKRPAKAQALE 139
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Query: 10 QIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHT 56
Q R+TN+A+VRMKK GKRFEIACYKNKV++WRN + ++ THT
Sbjct: 1 QKRLTNIAVVRMKKHGKRFEIACYKNKVVNWRNG----VGTLVLTHT 43
>gi|367002201|ref|XP_003685835.1| hypothetical protein TPHA_0E03110 [Tetrapisispora phaffii CBS 4417]
gi|357524134|emb|CCE63401.1| hypothetical protein TPHA_0E03110 [Tetrapisispora phaffii CBS 4417]
Length = 251
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 153/294 (52%), Gaps = 66/294 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+ QI++TNV++V+++K KRFEIACY+NKV +R +E
Sbjct: 6 PSGQIKLTNVSLVKLRKNKKRFEIACYQNKVQDYRKGVE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+DEVLQ VF NVSKG AA K+DL K+F T+D
Sbjct: 45 -------------------------KDLDEVLQIPQVFVNVSKGLAAPKDDLLKSFGTDD 79
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I K IL+KGE+Q+ +KER + ++ TI+S KCIN ++K+ + +MI L++
Sbjct: 80 IDLIIKEILLKGEIQLHEKERQIMLNKINNEMLTIISTKCINPKSKKRYPPTMIYKALQE 139
Query: 279 IHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEV-------SAGVKDVKKLKE 329
+ FS +NK +K QALE I L KQ + I RA+M +++ + S + + K+ +
Sbjct: 140 LKFSPVINKPAKSQALEAIRLLVSKQIIPIARAKMDIKITIENLELVESKDSEIIPKITK 199
Query: 330 KLVKCATSVEN--EEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++ + + ++W G LIDP YR++ T G T+++L++
Sbjct: 200 YFLQPTINKTDAIKKWVCSG-----LIDPVSYRDL----VTICTGIATIQVLDM 244
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 65/85 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+ QI++TNV++V+++K KRFEIACY+NKV +R +EKD+DEVLQ VF NVSKG A
Sbjct: 6 PSGQIKLTNVSLVKLRKNKKRFEIACYQNKVQDYRKGVEKDLDEVLQIPQVFVNVSKGLA 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A K+DL K+F T+D I K IL+K
Sbjct: 66 APKDDLLKSFGTDDIDLIIKEILLK 90
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L E+ E+ER + ++ TI+S KCIN ++K+ + +MI L+++ FS
Sbjct: 86 EILLKGEIQLHEKERQIMLNKINNEMLTIISTKCINPKSKKRYPPTMIYKALQELKFSPV 145
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 146 INKPAKSQALE 156
>gi|396489267|ref|XP_003843062.1| similar to shwachman-Bodian-Diamond syndrome protein [Leptosphaeria
maculans JN3]
gi|312219640|emb|CBX99583.1| similar to shwachman-Bodian-Diamond syndrome protein [Leptosphaeria
maculans JN3]
Length = 296
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 92/332 (27%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P+NQI++TNV++VR+KK KRFEIACYKNKV+ WRN IE
Sbjct: 5 VFQPSNQIKLTNVSLVRIKKGKKRFEIACYKNKVLEWRNKIE------------------ 46
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+ VLQ VF NVSKGQ A K DL+KAF
Sbjct: 47 ----------------------------KDLSNVLQIENVFLNVSKGQVAPKADLEKAFP 78
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+ EI IL GELQ+ +KER++++E ++ IV+ K ++ +TKR +T MIE
Sbjct: 79 KKTVEEIIIDILENGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTTGMIEKA 138
Query: 276 LKQIH--------------------------FSVNVNKNSKQQALEVIPTL--KQCMSIE 307
L + + K++K QAL + L Q + +
Sbjct: 139 LDGLSSQAAAQQSDHAEAGDDKAKAKDLPKWTGIVTTKSAKSQALFAMKALIAHQPIPVA 198
Query: 308 RAQMRVRVEVSAGV-----KDVKK-------------LKEKLVKCATSVENEEWSGGGLL 349
R QM++R+ V K+ K +K+ ++ ++E+++ G
Sbjct: 199 RMQMKLRITCPTSVLKQAIKNAPKTPAGTDEKTSSGTVKDAILGFMENIESQDTIGAEWE 258
Query: 350 LICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+ L++PG ++ ++E++ ++T+G+G +E+L +
Sbjct: 259 AVGLVEPGAFKGLNEIIESQTKGRGNVEVLEM 290
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/86 (61%), Positives = 64/86 (74%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P+NQI++TNV++VR+KK KRFEIACYKNKV+ WRN IEKD+ VLQ VF NVSK
Sbjct: 5 VFQPSNQIKLTNVSLVRIKKGKKRFEIACYKNKVLEWRNKIEKDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A K DL+KAF + EI IL
Sbjct: 65 GQVAPKADLEKAFPKKTVEEIIIDIL 90
>gi|340959626|gb|EGS20807.1| hypothetical protein CTHT_0026450 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 350
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 167/387 (43%), Gaps = 146/387 (37%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ H VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIHNVFLNVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A K++L KAF ++ +D+++
Sbjct: 63 GQTAPKDELAKAFG------------KDTSMDDIILE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE
Sbjct: 88 ----------ILRKGEMQVGEKERTAQLERIHNEVISIVTSKLVDPRTKRVYTPGMIEKA 137
Query: 276 LKQIH-----------------------------------------------FSVNVNKN 288
L + V NK+
Sbjct: 138 LDMLSSMAHQNQQQDKEKNTTSNGTNTPSTSTEQPQPPTVEGNSKTQRLPTWTGVTANKS 197
Query: 289 SKQQALEVIPTL--KQCMSIERAQMRVRV------------------------------- 315
+K QAL+ I L Q + + RA+MR+RV
Sbjct: 198 AKSQALDAIRALIAHQPIPVARARMRLRVTCPTSVLKQAVRAPKGGSAAYKDGGDGGGDS 257
Query: 316 ---------------EVSAGVKDVKK------LKEKLVKCATSVENEEWSGGGLLLICLI 354
EV A +D ++ +K+K++ VE+++ G ++ +
Sbjct: 258 KKGKKGRDKGTDKKEEVPATAQDGEEQKAPGTVKDKILGFIEQVESQDVVGSEWEIVGFV 317
Query: 355 DPGKYREIDELVRTETRGQGTLELLNL 381
+PG ++ + + + ET+GQG +E+L++
Sbjct: 318 EPGAFKGLSDFIAGETKGQGRVEVLDM 344
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 59/74 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ H VF NVSK
Sbjct: 3 IQQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIHNVFLNVSK 62
Query: 64 GQAANKEDLKKAFN 77
GQ A K++L KAF
Sbjct: 63 GQTAPKDELAKAFG 76
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ GE+ER++Q+E ++ +IV+ K ++ TKR +T MIE L +
Sbjct: 86 LEILRKGEMQVGEKERTAQLERIHNEVISIVTSKLVDPRTKRVYTPGMIEKALDMLSSMA 145
Query: 436 NVNKNSKQQALEEDKTS 452
+ N +QQ E++ TS
Sbjct: 146 HQN---QQQDKEKNTTS 159
>gi|189208917|ref|XP_001940791.1| hypothetical protein PTRG_10460 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976884|gb|EDU43510.1| hypothetical protein PTRG_10460 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 301
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 156/337 (46%), Gaps = 97/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WR EKD+ VLQ VF NVSK
Sbjct: 5 INQPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRTKNEKDLSNVLQIENVFLNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A K DL+KAF L
Sbjct: 65 GQVAPKADLEKAFPKKSLE----------------------------------------- 83
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI IL GELQ+ +KER++++E ++ IV+ K ++ +TKR +T MIE
Sbjct: 84 -----EIIIDILDHGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTTGMIEKA 138
Query: 276 LKQIHFS-------------------------------VNVNKNSKQQALEVIPTL--KQ 302
L Q+ + + NK+SK QAL + L Q
Sbjct: 139 LDQLSSAAATQQGEKDKGESKEDGEDKGKAKELPKWTGIVTNKSSKSQALFAMKALIAHQ 198
Query: 303 CMSIERAQMRVRVE-----VSAGVKDVKK-------------LKEKLVKCATSVENEEWS 344
+ + R QM++RV + +K K +K+ ++ +E+++
Sbjct: 199 PIPVARMQMKLRVTCPTSVLKQAIKTAPKAQPGTEEKGSSGTVKDAILGFMEKIESQDTL 258
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + L++PG ++ ++EL+ +T+G+G +E+L +
Sbjct: 259 GAEWEAVGLVEPGAFKGLNELIEGQTKGRGNVEVLEM 295
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 61/86 (70%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WR EKD+ VLQ VF NVSK
Sbjct: 5 INQPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRTKNEKDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A K DL+KAF + EI IL
Sbjct: 65 GQVAPKADLEKAFPKKSLEEIIIDIL 90
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+++L+ E+ GE+ER++++E ++ IV+ K ++ +TKR +T MIE L Q+ +
Sbjct: 87 IDILDHGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTTGMIEKALDQLSSAA 146
Query: 436 NVNKNSKQQA 445
+ K +
Sbjct: 147 ATQQGEKDKG 156
>gi|330943819|ref|XP_003306265.1| hypothetical protein PTT_19385 [Pyrenophora teres f. teres 0-1]
gi|311316276|gb|EFQ85640.1| hypothetical protein PTT_19385 [Pyrenophora teres f. teres 0-1]
Length = 301
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 155/337 (45%), Gaps = 97/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WR EKD+ VLQ VF NVSK
Sbjct: 5 INQPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRTKNEKDLSNVLQIENVFLNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A K DL+KAF L
Sbjct: 65 GQVAPKADLEKAFPKKSLE----------------------------------------- 83
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI IL GELQ+ +KER++++E ++ IV+ K ++ +TKR +T MIE
Sbjct: 84 -----EIIIDILDHGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTTGMIEKA 138
Query: 276 LKQIHFS-------------------------------VNVNKNSKQQALEVIPTL--KQ 302
L Q+ + + NK+SK QAL + L Q
Sbjct: 139 LDQLSSAAATQQGEKDKGESKEDGEDKGKAKELPKWTGIVTNKSSKSQALFAMKALIAHQ 198
Query: 303 CMSIERAQMRVRVEVSAGV-KDVKKL-----------------KEKLVKCATSVENEEWS 344
+ + R QM++RV V K K+ K+ ++ +E+++
Sbjct: 199 PIPVARMQMKLRVTCPTSVLKQAIKIAPKAQPGTEEKGSSGTVKDAILGFMEKIESQDTL 258
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + L++PG ++ ++EL+ +T+G+G +E+L +
Sbjct: 259 GAEWEAVGLVEPGAFKGLNELIEGQTKGRGNVEVLEM 295
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 61/86 (70%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VRMKK KRFEIACYKNKV+ WR EKD+ VLQ VF NVSK
Sbjct: 5 INQPSNQIKLTNVSLVRMKKGKKRFEIACYKNKVLEWRTKNEKDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A K DL+KAF + EI IL
Sbjct: 65 GQVAPKADLEKAFPKKSLEEIIIDIL 90
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
+++L+ E+ GE+ER++++E ++ IV+ K ++ +TKR +T MIE L Q+ +
Sbjct: 87 IDILDHGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTTGMIEKALDQLSSAA 146
Query: 436 NVNKNSKQQA 445
+ K +
Sbjct: 147 ATQQGEKDKG 156
>gi|116207688|ref|XP_001229653.1| hypothetical protein CHGG_03137 [Chaetomium globosum CBS 148.51]
gi|88183734|gb|EAQ91202.1| hypothetical protein CHGG_03137 [Chaetomium globosum CBS 148.51]
Length = 324
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 157/359 (43%), Gaps = 122/359 (33%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+D VLQ +VF NVSKGQ A +L KAF +
Sbjct: 46 --------------------------DLDNVLQIPSVFLNVSKGQTAPSAELAKAFGKDT 79
Query: 219 QTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ I IL KGE+Q+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE L
Sbjct: 80 PVDDIILEILRKGEMQVGEKERTAQLERVHNEVISIVASKLVDPRTKRVYTSGMIEKALD 139
Query: 278 QIHF----------------------------------------------SVNVNKNSKQ 291
+ V+ NK++K
Sbjct: 140 MLSANAHQQQQQDKDNKKDNNNNNDSNNPSATGTPATGEAGESKPRPTWTGVSANKSAKS 199
Query: 292 QALEVIPTL--KQCMSIERAQMRVRVEVSAGV---------------------------K 322
QAL+ + L Q + + RA+MR+R+ S V K
Sbjct: 200 QALDAMKALIAHQPIPVARARMRLRITCSTNVLKQAVKAPKGAAAAAGGKDTEGGDGEPK 259
Query: 323 DVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+K+K++ +EN++ G ++ ++PG ++ + + V ET+GQG +E+L++
Sbjct: 260 APGTVKDKILSFIEQIENQDVIGSEWEIVGFVEPGAFKGLSDFVGGETKGQGRVEVLDM 318
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 62/83 (74%), Gaps = 2/83 (2%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ +VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPSVFLNVSKGQT 65
Query: 67 ANKEDLKKAFNTEDQTEICKLIL 89
A +L KAF + T + +IL
Sbjct: 66 APSAELAKAFGKD--TPVDDIIL 86
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK +D+++ LE+L E+ GE+ER++Q+E ++ +IV+ K ++ TK
Sbjct: 76 GKDTPVDDII---------LEILRKGEMQVGEKERTAQLERVHNEVISIVASKLVDPRTK 126
Query: 417 RPFTVSMIEAGLKQI 431
R +T MIE L +
Sbjct: 127 RVYTSGMIEKALDML 141
>gi|123378787|ref|XP_001298237.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121878728|gb|EAX85307.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 271
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 54/272 (19%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGL---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEV+Q+H++F+NV +G A + ++ +
Sbjct: 45 ------------------------------EKDIDEVVQSHSIFSNVDRGMLAKQSEVLE 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+D + +IL +G+L +++KER IEN KDIA+IV+ +C+N T+RP T S +
Sbjct: 75 TLEVDDMEKALHIILDQGKLTLAEKERKLVIENLTKDIASIVASQCVNVNTQRPLTPSTV 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQC-MSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E +K+I FSV K +K QAL+VI LK I RA++R+ ++ EK+
Sbjct: 135 ERAMKEIGFSVKPAKPAKAQALKVIRDLKAAHYPIARAKIRLVFYITPD------HAEKM 188
Query: 332 VKCATSVENEEWSGGG-LLLICLIDPGKYREI 362
+ VE + S +I ++PG R++
Sbjct: 189 ISMLPYVEKVDKSDPNQTAVIAQVEPGSLRQV 220
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +EKDIDEV+Q+H++F+N
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGLEKDIDEVVQSHSIFSN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
V +G A + ++ + +D + +IL
Sbjct: 61 VDRGMLAKQSEVLETLEVDDMEKALHIIL 89
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ ++T E+ER IEN KDIA+IV+ +C+N T+RP T S +E +K+I FSV
Sbjct: 88 ILDQGKLTLAEKERKLVIENLTKDIASIVASQCVNVNTQRPLTPSTVERAMKEIGFSVKP 147
Query: 438 NKNSKQQAL 446
K +K QAL
Sbjct: 148 AKPAKAQAL 156
>gi|123435745|ref|XP_001309035.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121890743|gb|EAX96105.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 271
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 54/272 (19%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGL---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEV+Q+H++F+NV +G A + ++ +
Sbjct: 45 ------------------------------EKDIDEVVQSHSIFSNVDRGMLAKQSEVLE 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+D + +LIL +G+L++++KER IEN KDIA+IV+ +C+N T+RP T S +
Sbjct: 75 TLEVDDMEKALRLILDQGKLKLAEKERKLVIENLTKDIASIVASQCVNVNTERPLTPSTV 134
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQC-MSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E +K+I FSV K +K QAL+VI LK RA++R+ ++ + EK+
Sbjct: 135 ERAMKEIGFSVKPTKPAKTQALKVIRDLKAAHYPTARAKIRLVFYITP------EHAEKM 188
Query: 332 VKCATSVENEEWSG-GGLLLICLIDPGKYREI 362
+ VE + S +I ++PG R++
Sbjct: 189 ISMLPLVEKVDKSDLNQTAVIAQVEPGSLRQV 220
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +EKDIDEV+Q+H++F+N
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGLEKDIDEVVQSHSIFSN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
V +G A + ++ + +D + +LIL
Sbjct: 61 VDRGMLAKQSEVLETLEVDDMEKALRLIL 89
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
QG L+L E+ER IEN KDIA+IV+ +C+N T+RP T S +E +K+I
Sbjct: 91 QGKLKL--------AEKERKLVIENLTKDIASIVASQCVNVNTERPLTPSTVERAMKEIG 142
Query: 433 FSVNVNKNSKQQAL 446
FSV K +K QAL
Sbjct: 143 FSVKPTKPAKTQAL 156
>gi|169598496|ref|XP_001792671.1| hypothetical protein SNOG_02052 [Phaeosphaeria nodorum SN15]
gi|160704405|gb|EAT90264.2| hypothetical protein SNOG_02052 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 152/337 (45%), Gaps = 97/337 (28%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQIR+TNV++VRMKK KRFEIACYKNKV+ +RN IE D+ VLQ VF NVSK
Sbjct: 5 INQPSNQIRLTNVSLVRMKKGKKRFEIACYKNKVLEYRNRIETDLSNVLQIENVFLNVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQAA K DL+KAF L
Sbjct: 65 GQAAPKADLEKAFPKKPLEA---------------------------------------- 84
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
I IL GELQ+ +KER++++E ++ IV+ K ++ +TKR +T MIE
Sbjct: 85 ------IIIDILENGELQVGEKERNAELERTKNEVIDIVAGKLVDPKTKRVYTSGMIEKA 138
Query: 276 LKQIH---------------------------------FSVNVNKNSKQQALEVIPTL-- 300
L + + K++K QAL + L
Sbjct: 139 LDGLSSQAASAQGDKDKKDAESKEDAEDKGKAKELPKWTGIVTTKSAKSQALFAMKALIA 198
Query: 301 KQCMSIERAQMRVRVEVSAGV----------------KDVKKLKEKLVKCATSVENEEWS 344
Q + + R QM++R+ V K +K+ ++ VE+++
Sbjct: 199 HQPIPVARMQMKLRITCPTSVLKQAAKTAPKAPAGEEKASGTVKDAILGLMEKVESQDVV 258
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G + L++PG ++ ++EL+ +T+G+G +E+L +
Sbjct: 259 GAEWEAVGLVEPGAFKGLNELIEGQTKGRGNVEVLEM 295
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 58/73 (79%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQIR+TNV++VRMKK KRFEIACYKNKV+ +RN IE D+ VLQ VF NVSK
Sbjct: 5 INQPSNQIRLTNVSLVRMKKGKKRFEIACYKNKVLEYRNRIETDLSNVLQIENVFLNVSK 64
Query: 64 GQAANKEDLKKAF 76
GQAA K DL+KAF
Sbjct: 65 GQAAPKADLEKAF 77
>gi|242772764|ref|XP_002478103.1| UPF0023 family protein [Talaromyces stipitatus ATCC 10500]
gi|218721722|gb|EED21140.1| UPF0023 family protein [Talaromyces stipitatus ATCC 10500]
Length = 332
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 159/366 (43%), Gaps = 128/366 (34%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ +EKD+D VLQ HTVF +V+K Q
Sbjct: 6 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGVEKDLDNVLQIHTVFLSVNKAQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +
Sbjct: 66 APSAELAKAFGAGV---------------------------------------------S 80
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
Q EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T +MIE L Q
Sbjct: 81 QDEIIQEILRKGEVQVGERERKDILERVQKEVVDIVSGRLVDPTTKRVYTPTMIEKALDQ 140
Query: 279 IHFS------------------------------VNVNKNSKQQALEVIPTL--KQCMSI 306
+ + V+ K++K QALE + L Q + +
Sbjct: 141 LSAASGHQQQQQNGEETPEHGATTGEQRKPLWKGVSATKSAKSQALEAMKALIAWQPIPV 200
Query: 307 ERAQMRVRVE------------VSAGV--------------------------------- 321
RA+MR+RV S+G
Sbjct: 201 MRARMRLRVTCPVSLLKQSVKGASSGAPKEESKPSKGNNKKGQKGKGKKHQDSEDEDETE 260
Query: 322 ------KDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGT 375
K +KEK++ SVE++E G + +PG ++ + E V +ETRG+G
Sbjct: 261 DQEASPKAPSNVKEKILSFIESVESQEIVGEEWETVGFAEPGAFKGLSEFVTSETRGRGR 320
Query: 376 LELLNL 381
+E+L++
Sbjct: 321 VEVLDM 326
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ +EKD+D VLQ HTVF +V+K Q
Sbjct: 6 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGVEKDLDNVLQIHTVFLSVNKAQT 65
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF Q EI + IL K
Sbjct: 66 APSAELAKAFGAGVSQDEIIQEILRK 91
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE ER +E K++ IVS + ++ TKR +T +MIE L Q+ S
Sbjct: 87 EILRKGEVQVGERERKDILERVQKEVVDIVSGRLVDPTTKRVYTPTMIEKALDQL--SAA 144
Query: 437 VNKNSKQQALEEDKTSG 453
+QQ EE G
Sbjct: 145 SGHQQQQQNGEETPEHG 161
>gi|407411433|gb|EKF33494.1| hypothetical protein MOQ_002638 [Trypanosoma cruzi marinkellei]
Length = 464
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 156/307 (50%), Gaps = 59/307 (19%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ P +Q R TNVA+VR K G R EIACYKNKVIS+R IE
Sbjct: 3 ARMQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
T M DEVLQ VFTNVS+G +++++++
Sbjct: 47 ----------------TRM--------------DEVLQVERVFTNVSRGLYSSEKEIQAV 76
Query: 214 FN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + E + IL GELQ++ +ER+++I+ F DIA I+S+KC+N T+RPF +I
Sbjct: 77 FGKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVI 136
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L+ I +V +++ K+QAL I L + + I RA+M++R ++ ++KL E
Sbjct: 137 EQALRSIGAAVKLDQPVKKQALAFIHQLIDAKTIPIARARMKLRC-IAPDEPSLEKLVEW 195
Query: 331 LVKCATSVENEEWSGGG-------LLLICLIDPGKYREIDELVRTETRGQGTLELLN--L 381
TS+ + GG L+ L+ P +REI+ V+TE G++ ++
Sbjct: 196 CESNGTSILQKVVEAGGSDAASQIHSLLILLQPHLFREIERFVKTEMPPGGSVHVIENAA 255
Query: 382 KEVTEGE 388
+V EG+
Sbjct: 256 MDVGEGD 262
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ P +Q R TNVA+VR K G R EIACYKNKVIS+R IE +DEVLQ VFTNV
Sbjct: 3 ARMQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIETRMDEVLQVERVFTNV 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G +++++++ F
Sbjct: 63 SRGLYSSEKEIQAVFG 78
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%), Gaps = 6/81 (7%)
Query: 372 GQGTLE------LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G+GT E +L+ E+ ++ER+++I+ F DIA I+S+KC+N T+RPF +IE
Sbjct: 78 GKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVIE 137
Query: 426 AGLKQIHFSVNVNKNSKQQAL 446
L+ I +V +++ K+QAL
Sbjct: 138 QALRSIGAAVKLDQPVKKQAL 158
>gi|212531365|ref|XP_002145839.1| UPF0023 family protein [Talaromyces marneffei ATCC 18224]
gi|210071203|gb|EEA25292.1| UPF0023 family protein [Talaromyces marneffei ATCC 18224]
Length = 334
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 105/368 (28%), Positives = 159/368 (43%), Gaps = 130/368 (35%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IV++KK KRFE+ACYKNK++ +R+ +EKDID VLQ HTVF +V K Q
Sbjct: 6 PSNQIKFTNVSIVKLKKGKKRFELACYKNKLLEYRSGVEKDIDNVLQIHTVFLSVQKAQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A DL K+F +
Sbjct: 66 APSADLVKSFGAGV---------------------------------------------S 80
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
Q EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T +MIE L Q
Sbjct: 81 QDEIIQEILRKGEVQVGERERKDILERIQKEVVDIVSGRLVDPTTKRVYTPTMIEKALDQ 140
Query: 279 IHFS------------------------------VNVNKNSKQQALEVIPTL--KQCMSI 306
+ + V+ K++K QALE + L Q + +
Sbjct: 141 LSATSGQQQQQHNGEETPEHGATAGEPRKPLWKGVSTTKSAKSQALEAMKALIAWQHIPV 200
Query: 307 ERAQMRVR-----------VEVSAGVKDVKK----------------------------- 326
RA+MR+R V+ SA D K
Sbjct: 201 MRARMRLRVTCPVSLLKQSVKGSASAGDAPKEDGKPSKGGNKKGQKGKGKKHQDSDDEDE 260
Query: 327 -------------LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQ 373
+KEK++ SVE++E G + +PG ++ + E V +ETRG+
Sbjct: 261 GEDQEAAPKAPSNVKEKILSFIESVESQEIVGEEWETVGFAEPGAFKGLSEFVTSETRGR 320
Query: 374 GTLELLNL 381
G +E+L++
Sbjct: 321 GRVEVLDM 328
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/86 (55%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IV++KK KRFE+ACYKNK++ +R+ +EKDID VLQ HTVF +V K Q
Sbjct: 6 PSNQIKFTNVSIVKLKKGKKRFELACYKNKLLEYRSGVEKDIDNVLQIHTVFLSVQKAQT 65
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A DL K+F Q EI + IL K
Sbjct: 66 APSADLVKSFGAGVSQDEIIQEILRK 91
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE ER +E K++ IVS + ++ TKR +T +MIE L Q+ S
Sbjct: 87 EILRKGEVQVGERERKDILERIQKEVVDIVSGRLVDPTTKRVYTPTMIEKALDQL--SAT 144
Query: 437 VNKNSKQQALEEDKTSG 453
+ +Q EE G
Sbjct: 145 SGQQQQQHNGEETPEHG 161
>gi|118376660|ref|XP_001021511.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89303278|gb|EAS01266.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 440
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 141/284 (49%), Gaps = 60/284 (21%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F PT I+MTNVA ++ K K+FEIACYKNK I+WRN +E
Sbjct: 1 MFQPTGIIKMTNVAFIKYKINNKKFEIACYKNKAINWRNGVE------------------ 42
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KDI EVLQ V+TN S G A K+DL+ F
Sbjct: 43 ----------------------------KDIGEVLQFEEVYTNASHGTIAKKQDLQTYFG 74
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+ +I KLIL KGELQ+ +KER Q+ + DI IV EKC++ +++R F++ ++
Sbjct: 75 DMKKLDIIKLILEKGELQVGEKEREVQLSSLQNDIINIVCEKCVHPDSQRKFSIDQMQKA 134
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCA 335
+K I+F + ++ +K+QALE I L + ++RA+M + + + + K+ L+
Sbjct: 135 IKSINFKIKPDQPAKKQALECIRLLCKKFYMQRAEMLISINLPSIDKN------NLLSYF 188
Query: 336 TSVENEEWS--------GGGLLLICLIDPGKYREIDELVRTETR 371
+E EE S + L+ I+P K+R I + + E +
Sbjct: 189 KELEIEESSIKKTVNKDKNRVELVVSIEPSKFRSISTIAKEELK 232
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 69/105 (65%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F PT I+MTNVA ++ K K+FEIACYKNK I+WRN +EKDI EVLQ V+TN S
Sbjct: 1 MFQPTGIIKMTNVAFIKYKINNKKFEIACYKNKAINWRNGVEKDIGEVLQFEEVYTNASH 60
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNV 108
G A K+DL+ F + +I KLIL K ++ +++++++
Sbjct: 61 GTIAKKQDLQTYFGDMKKLDIIKLILEKGELQVGEKEREVQLSSL 105
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ GE+ER Q+ + DI IV EKC++ +++R F++ ++ +K I+F +
Sbjct: 85 ILEKGELQVGEKEREVQLSSLQNDIINIVCEKCVHPDSQRKFSIDQMQKAIKSINFKIKP 144
Query: 438 NKNSKQQALE 447
++ +K+QALE
Sbjct: 145 DQPAKKQALE 154
>gi|189313489|gb|ACD88761.1| SBDS-like protein [Trypanosoma cruzi]
Length = 464
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 67/311 (21%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
T M DEVLQ VFTNVS+G +++++++
Sbjct: 47 ----------------TRM--------------DEVLQVERVFTNVSRGLYSSEKEIEAV 76
Query: 214 FN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + E + IL GELQ++ +ER+++I+ F DIA I+S+KC+N T+RPF +I
Sbjct: 77 FGKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVI 136
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L I +V +++ K+QAL I L + + I RA+M++R V D L EK
Sbjct: 137 EQALHSIGAAVKLDQPVKKQALAFIHQLIDAKTIPIARARMKLRCVVP----DEPSL-EK 191
Query: 331 LVK-C---ATSVENEEWSGGG-------LLLICLIDPGKYREIDELVRTETRGQGTLELL 379
LV+ C TS+ + GG L+ L+ P +R+I+ V+TE G++ ++
Sbjct: 192 LVEWCETNGTSILQKVVEAGGSDAALQIHSLLILLQPHLFRDIERFVKTEMPPGGSVHVI 251
Query: 380 N--LKEVTEGE 388
+V EG+
Sbjct: 252 ENAAMDVGEGD 262
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE +DEVLQ VFTNV
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIETRMDEVLQVERVFTNV 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G +++++++ F
Sbjct: 63 SRGLYSSEKEIEAVFG 78
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 372 GQGTLE------LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G+GT E +L+ E+ ++ER+++I+ F DIA I+S+KC+N T+RPF +IE
Sbjct: 78 GKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVIE 137
Query: 426 AGLKQIHFSVNVNKNSKQQAL 446
L I +V +++ K+QAL
Sbjct: 138 QALHSIGAAVKLDQPVKKQAL 158
>gi|350629987|gb|EHA18360.1| hypothetical protein ASPNIDRAFT_176840 [Aspergillus niger ATCC
1015]
Length = 302
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 98/336 (29%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK Q
Sbjct: 6 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF + DE+ Q
Sbjct: 66 APSAELTKAFGADT------------PADEIRQE-------------------------- 87
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL-- 276
IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI L
Sbjct: 88 -------ILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKALDQ 140
Query: 277 -----------------------------KQIHFSVNVNKNSKQQALEVIPTL--KQCMS 305
K + V NK++K QALE + L Q +
Sbjct: 141 LSSASGQQQSQTSGNGETNGDDSEESRPRKPLWTGVTANKSAKSQALEAMKALIAWQPIP 200
Query: 306 IERAQMRVRVEVSAGV-------------------KDVKKLKEKLVKCATSVENEEWSGG 346
+ RA+MR+RV + K+ +K+K++ S+E +E GG
Sbjct: 201 VMRARMRLRVTCPVSLLKQSVKGGAAGGAAAGGKEKEAPNVKDKILSYIESIEAQEVVGG 260
Query: 347 G-LLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+I +PG ++ ++E V ETRG+G +E+L++
Sbjct: 261 DEWEIIGFAEPGAFKGLNEFVGNETRGRGRVEVLDM 296
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK Q
Sbjct: 6 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQT 65
Query: 67 ANKEDLKKAFNTEDQT-EICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 66 APSAELTKAFGADTPADEIRQEILRK 91
>gi|407850779|gb|EKG04989.1| hypothetical protein TCSYLVIO_003942 [Trypanosoma cruzi]
Length = 464
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 67/311 (21%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIE---------------- 46
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
T M DEVLQ VFTNVS+G +++++++
Sbjct: 47 ----------------TRM--------------DEVLQVERVFTNVSRGLYSSEKEIEAV 76
Query: 214 FN-TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F + E + IL GELQ++ +ER+++I+ F DIA I+S+KC+N T+RPF +I
Sbjct: 77 FGKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVI 136
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L I +V +++ K+QAL I L + + I RA+M++R V D L EK
Sbjct: 137 EQALHSIGAAVKLDQPVKKQALAFIHQLIDAKTIPIARARMKLRCVVP----DEPSL-EK 191
Query: 331 LVK-C---ATSVENEEWSGGG-------LLLICLIDPGKYREIDELVRTETRGQGTLELL 379
LV+ C TS+ + GG L+ L+ P +R+I+ V+TE G++ ++
Sbjct: 192 LVEWCETNGTSILQKVVEAGGSDAALQIHSLLILLQPHLFRDIEMFVKTEMPPGGSVHVI 251
Query: 380 N--LKEVTEGE 388
+V EG+
Sbjct: 252 ENAAMDVGEGD 262
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE +DEVLQ VFTNV
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIETRMDEVLQVERVFTNV 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G +++++++ F
Sbjct: 63 SRGLYSSEKEIEAVFG 78
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 372 GQGTLE------LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G+GT E +L+ E+ ++ER+++I+ F DIA I+S+KC+N T+RPF +IE
Sbjct: 78 GKGTSEKEALQYILDHGELQVAQQERAAEIDQMFIDIAVIISQKCVNEVTQRPFPSQVIE 137
Query: 426 AGLKQIHFSVNVNKNSKQQAL 446
L I +V +++ K+QAL
Sbjct: 138 QALHSIGAAVKLDQPVKKQAL 158
>gi|154336327|ref|XP_001564399.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061434|emb|CAM38460.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 530
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 153/301 (50%), Gaps = 63/301 (20%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ P +Q R TN+A+VR K G + EIACYKNKVIS+R
Sbjct: 3 ARMQVPLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYR-------------------- 42
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
S E +DEVLQ +F NV++G A++++++
Sbjct: 43 --------------------------SGTENRLDEVLQVERIFANVARGYLASEKEIQTV 76
Query: 214 FNTEDQTEI--CKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
F D TE+ K +L GELQ++ +ER+++++ FKDIA I+S+KCINT+T+RPF +
Sbjct: 77 FGG-DMTELEAIKYMLNHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPSQV 135
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK- 328
IE L+ I +V +++ K+QAL ++ L + I RA M++R ++ ++KL+
Sbjct: 136 IEQALRSIGAAVKLDQPVKKQALSLMHLLIDSNVIPIARANMKIRCTTTSEAA-LEKLRV 194
Query: 329 ---------EKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
EK V ++ + G G L+ L+ P +R++D ++ E T ++
Sbjct: 195 WCRDNDADVEK-VTVTSNASGSDNGGVGHSLVLLMQPNLFRDLDHFIKEELPSGSTTHMV 253
Query: 380 N 380
+
Sbjct: 254 D 254
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E +DEVLQ +F NV
Sbjct: 3 ARMQVPLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTENRLDEVLQVERIFANV 62
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILM 90
++G A++++++ F D TE+ + M
Sbjct: 63 ARGYLASEKEIQTVFGG-DMTELEAIKYM 90
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 50/69 (72%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+LN E+ ++ER+++++ FKDIA I+S+KCINT+T+RPF +IE L+ I +V +
Sbjct: 90 MLNHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPSQVIEQALRSIGAAVKL 149
Query: 438 NKNSKQQAL 446
++ K+QAL
Sbjct: 150 DQPVKKQAL 158
>gi|72388080|ref|XP_844464.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359397|gb|AAX79835.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800997|gb|AAZ10905.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 468
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 154/309 (49%), Gaps = 63/309 (20%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ P +Q R TNVA VR K G + EIACYKNKVIS+RN +E +
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYTKNGHKLEIACYKNKVISYRNGVETRL------------- 49
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
DEVLQ VFTN+S+G A+++D++
Sbjct: 50 ---------------------------------DEVLQIDRVFTNISRGLFASEKDIQAV 76
Query: 214 FN---TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVS 270
F TE+ + K IL+ GELQ++ ER ++ F DIA I+S+KC+N T+RPF
Sbjct: 77 FGKGTTEE--DALKYILVHGELQVAQHEREVEVNQMFTDIALIISQKCVNEVTQRPFPAQ 134
Query: 271 MIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK 328
+IE L+ I +V +++ +K+QAL +I L Q + I RA M++R + + +KK+
Sbjct: 135 VIEQALRSIGAAVRLDQPAKKQALALIHRLMDAQIIPIARAPMKLRC-TTVDEQSLKKVT 193
Query: 329 E--------KLVKCATSVENEEWSGGG-LLLICLIDPGKYREIDELVRTETRGQGTLELL 379
E L + + ++E G G L+ L+ P +R+++ V+ E T+ ++
Sbjct: 194 EWCESNRATILEEPGETCQDETVHGAGKYSLLILLQPHLFRDLEIFVKDELPHGATVHMI 253
Query: 380 NLKEVTEGE 388
+ + GE
Sbjct: 254 DSVAMDVGE 262
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ P +Q R TNVA VR K G + EIACYKNKVIS+RN +E +DEVLQ VFTN+
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYTKNGHKLEIACYKNKVISYRNGVETRLDEVLQIDRVFTNI 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G A+++D++ F
Sbjct: 63 SRGLFASEKDIQAVFG 78
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 372 GQGTLELLNLK------EVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G+GT E LK E+ + ER ++ F DIA I+S+KC+N T+RPF +IE
Sbjct: 78 GKGTTEEDALKYILVHGELQVAQHEREVEVNQMFTDIALIISQKCVNEVTQRPFPAQVIE 137
Query: 426 AGLKQIHFSVNVNKNSKQQAL 446
L+ I +V +++ +K+QAL
Sbjct: 138 QALRSIGAAVRLDQPAKKQAL 158
>gi|145523015|ref|XP_001447346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414857|emb|CAK79949.1| unnamed protein product [Paramecium tetraurelia]
Length = 384
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 146/287 (50%), Gaps = 56/287 (19%)
Query: 95 KIFTPTNQIRMTNVAIVRMK-KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++ P ++MTN+AI++ + ++FEIACYKNK I+WRN +E
Sbjct: 2 RVTQPVGIVQMTNIAIIKYRTNNNQKFEIACYKNKAINWRNGVE---------------- 45
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KD+++VLQ + VFTN +KG A+ ++L
Sbjct: 46 ------------------------------KDLNDVLQVYEVFTNATKGDVASGKELLNC 75
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T ++ +I K+IL KG+LQ+ DKER +Q+E+ ++DI + EKCI+ + R T IE
Sbjct: 76 FQTNNKDQIIKIILQKGDLQVGDKEREAQLEHYYRDIVKFIQEKCIHAISGRQLTQQSIE 135
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVE-VSAGVKDVKKLKEKLV 332
+ ++ F V +K K QAL+ I LK+ I+RA M+V + + ++ V + E+L
Sbjct: 136 YAISKVQFVVKTDKPVKLQALQCIKKLKESFFIQRAPMKVSISFIDEQMELVHMMLEELG 195
Query: 333 KCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
+N ++ I +IDP +R + V E + + TLE++
Sbjct: 196 LYDIDQQNNKF-------IFMIDPKLFRTLSNRV-NEKQFKSTLEVI 234
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 3 KIFTPTNQIRMTNVAIVRMK-KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++ P ++MTN+AI++ + ++FEIACYKNK I+WRN +EKD+++VLQ + VFTN
Sbjct: 2 RVTQPVGIVQMTNIAIIKYRTNNNQKFEIACYKNKAINWRNGVEKDLNDVLQVYEVFTNA 61
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
+KG A+ ++L F T ++ +I K+IL K
Sbjct: 62 TKGDVASGKELLNCFQTNNKDQIIKIILQK 91
>gi|432102832|gb|ELK30300.1| Ribosome maturation protein SBDS [Myotis davidii]
Length = 100
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 71/85 (83%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQI +TNVA+ RMK+A K FEI CYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIHLTNVAVARMKRARKHFEITCYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLI 88
GQ A KEDL AF T+DQTEICK +
Sbjct: 63 GQVAKKEDLISAFGTDDQTEICKQV 87
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/76 (71%), Positives = 63/76 (82%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQI +TNVA+ RMK+A K FEI CYKNKV+ WR+ +EKD+DEVLQTH+VF NVSK
Sbjct: 3 IFTPTNQIHLTNVAVARMKRARKHFEITCYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSK 62
Query: 156 GQAANKEDLKKAFNTN 171
GQ A KEDL AF T+
Sbjct: 63 GQVAKKEDLISAFGTD 78
>gi|157875639|ref|XP_001686204.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129278|emb|CAJ07818.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|336391087|tpg|DAA34843.1| TPA_inf: Shwachman-Bodian-Diamond protein-like protein [Leishmania
major]
Length = 535
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 146/281 (51%), Gaps = 59/281 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTE--------------------- 46
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE- 217
N+ +DEVLQ +F NV++G A++++++ F E
Sbjct: 47 -NR------------------------LDEVLQVERIFANVARGYLASEKEIQTVFGGEM 81
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ E + +L GELQ++ +ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+
Sbjct: 82 TEAEAIRYMLDHGELQVAQQERAAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALR 141
Query: 278 QIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK-----EK 330
I +V ++++ K+QAL +I L + I RA M++R ++ ++KL+
Sbjct: 142 SIGAAVKLDQSVKKQALGLIHLLIDSDILPIARANMKIRCTTTSEAA-LEKLRGWCRDND 200
Query: 331 LVKCATSVENEEWSGG----GLLLICLIDPGKYREIDELVR 367
+ SV + GG G L+ L+ P +R++D V+
Sbjct: 201 ADVVSDSVTGKTSDGGSGNFGHALLLLMQPNLFRDLDHFVK 241
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E +DEVLQ +F NV++G
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTENRLDEVLQVERIFANVARGYL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
A++++++ F E TE + M D ++
Sbjct: 68 ASEKEIQTVFGGE-MTEAEAIRYMLDHGEL 96
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 51/69 (73%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+ I +V +
Sbjct: 90 MLDHGELQVAQQERAAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALRSIGAAVKL 149
Query: 438 NKNSKQQAL 446
+++ K+QAL
Sbjct: 150 DQSVKKQAL 158
>gi|255946736|ref|XP_002564135.1| Pc22g00900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591152|emb|CAP97378.1| Pc22g00900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 338
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 164/375 (43%), Gaps = 134/375 (35%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ TVF +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTVFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF T + RE
Sbjct: 63 AQTAPSAELAKAFGTG--------TPRE-------------------------------- 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T MI
Sbjct: 83 -----EILQEILRKGEVQVGERERKDILERVEKEVLDIVSGRLVDPSTKRVYTSGMIHKA 137
Query: 276 LKQIHFS------------------------------VNVNKNSKQQALEVIPTL--KQC 303
L Q+ + V+ N+++K QAL+ + L Q
Sbjct: 138 LDQLSSASGQQQTQASGEANGDGEEKPSQPKKPLWTGVSANRSAKSQALDAMKALIAWQP 197
Query: 304 MSIERAQMRVRV------------------------------------------------ 315
+ + RA+MR+RV
Sbjct: 198 IPVMRARMRLRVTCPVSLLKQSVKAAPGAGSNKEKEAPSGGSKNNKKGNKGSKKSAKRDD 257
Query: 316 -EVSAGVKDVKK-------LKEKLVKCATSVENEEWSGGG-LLLICLIDPGKYREIDELV 366
++ G DV+ +K+K++ SVE++E GG ++ +PG ++ ++ELV
Sbjct: 258 SDIEGGQSDVEATPKAPSTVKDKIMAFIESVESQEVVGGDEWEVVGFAEPGAFKGLNELV 317
Query: 367 RTETRGQGTLELLNL 381
ETRG+G +E+L++
Sbjct: 318 SNETRGRGRVEVLDM 332
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ TVF +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTVFLSVSK 62
Query: 64 GQAANKEDLKKAFNTE-DQTEICKLILMK 91
Q A +L KAF T + EI + IL K
Sbjct: 63 AQTAPSAELAKAFGTGTPREEILQEILRK 91
>gi|261327638|emb|CBH10614.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 467
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 154/309 (49%), Gaps = 63/309 (20%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ P +Q R TNVA VR K G + EIACYKNKVIS+RN +E +
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYTKNGHKLEIACYKNKVISYRNGVETRL------------- 49
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
DEVLQ VFTN+S+G A+++D++
Sbjct: 50 ---------------------------------DEVLQIDRVFTNISRGLFASEKDIQAV 76
Query: 214 FN---TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVS 270
F TE+ + K IL+ GELQ++ ER ++ F DIA I+S+KC+N T+RPF
Sbjct: 77 FGKGTTEE--DALKYILVHGELQVAQHEREVEVNQMFTDIALIISQKCVNEVTQRPFPAQ 134
Query: 271 MIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK 328
+I+ L+ I +V +++ +K+QAL +I L Q + I RA M++R + + +KK+
Sbjct: 135 VIKQALRSIGAAVRLDQPAKKQALALIHRLMDAQIIPIARAPMKLRC-TTVDEQSLKKVT 193
Query: 329 E--------KLVKCATSVENEEWSGGG-LLLICLIDPGKYREIDELVRTETRGQGTLELL 379
E L + + ++E G G L+ L+ P +R+++ V+ E T+ ++
Sbjct: 194 EWCESNRATILEEPGETCQDETVHGAGKYSLLILLQPHLFRDLEIFVKDELPHGATVHMI 253
Query: 380 NLKEVTEGE 388
+ + GE
Sbjct: 254 DSVAMDVGE 262
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ P +Q R TNVA VR K G + EIACYKNKVIS+RN +E +DEVLQ VFTN+
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYTKNGHKLEIACYKNKVISYRNGVETRLDEVLQIDRVFTNI 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G A+++D++ F
Sbjct: 63 SRGLFASEKDIQAVFG 78
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 372 GQGTLELLNLK------EVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 425
G+GT E LK E+ + ER ++ F DIA I+S+KC+N T+RPF +I+
Sbjct: 78 GKGTTEEDALKYILVHGELQVAQHEREVEVNQMFTDIALIISQKCVNEVTQRPFPAQVIK 137
Query: 426 AGLKQIHFSVNVNKNSKQQAL 446
L+ I +V +++ +K+QAL
Sbjct: 138 QALRSIGAAVRLDQPAKKQAL 158
>gi|145502198|ref|XP_001437078.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404225|emb|CAK69681.1| unnamed protein product [Paramecium tetraurelia]
Length = 384
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 58/288 (20%)
Query: 95 KIFTPTNQIRMTNVAIVRMK-KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++ P ++MTN+AI++ + ++FEIACYKNK I+WRN +E
Sbjct: 2 RVTQPVGIVQMTNIAIIKYRTNNNQKFEIACYKNKAINWRNGVE---------------- 45
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
KD+ EVLQ + +FTN +KG A+ ++L
Sbjct: 46 ------------------------------KDLSEVLQVYEIFTNATKGDVASGKELLYC 75
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F T D+ +I K IL KG+LQ+ DKER +Q+E+ ++DI + +KCI+ + R T IE
Sbjct: 76 FQTNDKDQIIKTILEKGDLQVGDKEREAQLEHYYRDIVKFIQDKCIHATSGRQLTQQSIE 135
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDV--KKLKEKL 331
+ ++ F V +K K QAL+ I LK+ I+RA M+V + +++ + L+E
Sbjct: 136 YAISKVQFVVKTDKPVKLQALQCIKKLKESFFIKRAPMKVSISFIDEQRELVYQMLEELG 195
Query: 332 VKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
+K N+ I +IDP +R + V TE + + TLE++
Sbjct: 196 LKDIVQQNNK--------FIVIIDPQLFRALSTKV-TEKQFKSTLEVV 234
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 3 KIFTPTNQIRMTNVAIVRMK-KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++ P ++MTN+AI++ + ++FEIACYKNK I+WRN +EKD+ EVLQ + +FTN
Sbjct: 2 RVTQPVGIVQMTNIAIIKYRTNNNQKFEIACYKNKAINWRNGVEKDLSEVLQVYEIFTNA 61
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
+KG A+ ++L F T D+ +I K IL K
Sbjct: 62 TKGDVASGKELLYCFQTNDKDQIIKTILEK 91
>gi|425768523|gb|EKV07044.1| UPF0023 family protein [Penicillium digitatum PHI26]
gi|425775665|gb|EKV13921.1| UPF0023 family protein [Penicillium digitatum Pd1]
Length = 337
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 164/374 (43%), Gaps = 133/374 (35%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ TVF +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTVFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF + RE
Sbjct: 63 AQTAPSAELTKAFGAG--------TPRE-------------------------------- 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T MI
Sbjct: 83 -----EILQEILRKGEVQVGERERKDILERVEKEVLDIVSGRLVDPSTKRVYTPGMIHKA 137
Query: 276 LKQIHFS------------------------------VNVNKNSKQQALEVIPTL--KQC 303
L Q+ + V+ N+++K QAL+ + L Q
Sbjct: 138 LDQLTSASGQQQTQASGEANGDGEEKPSQPKKPLWTGVSANRSAKIQALDAMKALIAWQP 197
Query: 304 MSIERAQMRVRV------------------------------------------------ 315
+ + RA+MR+RV
Sbjct: 198 IPVMRARMRLRVTCPVALLKQSVKAASGPASIKEKEASSGGPKNKKGNKGAKKSAKKDDS 257
Query: 316 EVSAGVKDVKK-------LKEKLVKCATSVENEEWSGGG-LLLICLIDPGKYREIDELVR 367
+V AG DV+ +K+K++ SVE++E GG ++ +PG ++ ++ELV
Sbjct: 258 DVEAGQSDVEAAPKAPSTVKDKIMAFIESVESQEVVGGDEWEIVGFAEPGAFKGLNELVS 317
Query: 368 TETRGQGTLELLNL 381
ETRG+G +E+L++
Sbjct: 318 NETRGRGRVEVLDM 331
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ TVF +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTVFLSVSK 62
Query: 64 GQAANKEDLKKAFNTE-DQTEICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 63 AQTAPSAELTKAFGAGTPREEILQEILRK 91
>gi|119473076|ref|XP_001258492.1| UPF0023 family protein [Neosartorya fischeri NRRL 181]
gi|119406644|gb|EAW16595.1| UPF0023 family protein [Neosartorya fischeri NRRL 181]
Length = 344
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 162/381 (42%), Gaps = 140/381 (36%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF N+ DE+ Q
Sbjct: 63 AQTAPSAELTKAFGPNV------------STDEIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER +E K++ IVS + I+ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEMLERVEKEVLDIVSGRLIDPNTKRVYTPGMISKA 137
Query: 276 LKQIHFS---------------------------------VNVNKNSKQQALEVIPTL-- 300
L Q+ + V NK++K QALE + L
Sbjct: 138 LDQLSSASGQQQMQQEGNGNGNGAGDENGPAQPRKPLWTGVTPNKSAKSQALEAMKALIA 197
Query: 301 KQCMSIERAQMRVRV--------------------------------------------- 315
Q + + RA+MR+RV
Sbjct: 198 WQPIPVMRARMRLRVTCPVALLKQSVKAAAAPGANKEKEAPSGGAKNNKKGGKGGKGKAA 257
Query: 316 -----EVSAGVKDVK---------KLKEKLVKCATSVENEEWSGGG-LLLICLIDPGKYR 360
+V AG D + +K+K++ SVE++E GG ++ +PG ++
Sbjct: 258 RQQDSDVEAGGSDAETAPAVKAPTNVKDKIMSYIESVESQEVVGGDEWEVVGFAEPGAFK 317
Query: 361 EIDELVRTETRGQGTLELLNL 381
+++ + TETRG+G +E+L++
Sbjct: 318 GLNDFIGTETRGRGRVEVLDM 338
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT-EICKLILMK 91
Q A +L KAF T EI + IL K
Sbjct: 63 AQTAPSAELTKAFGPNVSTDEIRQEILRK 91
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
E+L EV GE ER +E K++ IVS + I+ TKR +T MI L Q+
Sbjct: 87 EILRKGEVQVGERERKEMLERVEKEVLDIVSGRLIDPNTKRVYTPGMISKALDQL 141
>gi|401428433|ref|XP_003878699.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494948|emb|CBZ30251.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 537
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 119/219 (54%), Gaps = 49/219 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTE--------------------- 46
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE- 217
N+ +DEVLQ +F NV++G A+++++K F E
Sbjct: 47 -NR------------------------LDEVLQVERIFANVARGYLASEKEIKAVFGDEM 81
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ E K +L GELQ++ +ER+++++ FKDIA I+S KCINT+T+RPF +IE L+
Sbjct: 82 TEVEAIKYMLDHGELQVAQQERTAEVDEMFKDIAVIISHKCINTKTQRPFPPQVIEQALR 141
Query: 278 QIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVR 314
I +V ++++ K+QAL +I L + I RA M++R
Sbjct: 142 SIGAAVKLDQSVKKQALGLIHLLIDSDILPIARANMKIR 180
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E +DEVLQ +F NV++G
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTENRLDEVLQVERIFANVARGYL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
A+++++K F E TE+ + M D ++
Sbjct: 68 ASEKEIKAVFGDE-MTEVEAIKYMLDHGEL 96
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 50/69 (72%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER+++++ FKDIA I+S KCINT+T+RPF +IE L+ I +V +
Sbjct: 90 MLDHGELQVAQQERTAEVDEMFKDIAVIISHKCINTKTQRPFPPQVIEQALRSIGAAVKL 149
Query: 438 NKNSKQQAL 446
+++ K+QAL
Sbjct: 150 DQSVKKQAL 158
>gi|146098859|ref|XP_001468490.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072858|emb|CAM71574.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 535
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 49/219 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +Q R TN+A+VR K G + EIACYKNKVIS+R
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYR------------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE- 217
S E +DEVLQ +F NV++G A++++++ F +E
Sbjct: 43 ---------------------SGTESRLDEVLQVERIFANVARGYLASEKEIQTVFGSEM 81
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ E K +L GELQ++ +ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+
Sbjct: 82 TEAEAIKYMLDHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALR 141
Query: 278 QIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVR 314
I +V ++++ K+QAL +I L + I RA M++R
Sbjct: 142 SIGAAVKLDQSVKKQALGLIHLLIDSGILPIARANMKIR 180
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E +DEVLQ +F NV++G
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTESRLDEVLQVERIFANVARGYL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
A++++++ F +E TE + M D ++
Sbjct: 68 ASEKEIQTVFGSE-MTEAEAIKYMLDHGEL 96
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 51/69 (73%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+ I +V +
Sbjct: 90 MLDHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALRSIGAAVKL 149
Query: 438 NKNSKQQAL 446
+++ K+QAL
Sbjct: 150 DQSVKKQAL 158
>gi|398022238|ref|XP_003864281.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502516|emb|CBZ37599.1| hypothetical protein, conserved [Leishmania donovani]
Length = 535
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 119/219 (54%), Gaps = 49/219 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P +Q R TN+A+VR K G + EIACYKNKVIS+R
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYR------------------------- 42
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE- 217
S E +DEVLQ +F NV++G A++++++ F +E
Sbjct: 43 ---------------------SGTESRLDEVLQVERIFANVARGYLASEKEIQTVFGSEM 81
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ E K +L GELQ++ +ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+
Sbjct: 82 TEAEAIKYMLDHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALR 141
Query: 278 QIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVR 314
I +V ++++ K+QAL +I L + I RA M++R
Sbjct: 142 SIGAAVKLDQSVKKQALGLIHLLIDSGILPIARANMKIR 180
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P +Q R TN+A+VR K G + EIACYKNKVIS+R+ E +DEVLQ +F NV++G
Sbjct: 8 PLSQRRHTNIAVVRYSKNGVKLEIACYKNKVISYRSGTESRLDEVLQVERIFANVARGYL 67
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
A++++++ F +E TE + M D ++
Sbjct: 68 ASEKEIQTVFGSE-MTEAEAIKYMLDHGEL 96
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 51/69 (73%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L+ E+ ++ER+++++ FKDIA I+S+KCINT+T+RPF ++E L+ I +V +
Sbjct: 90 MLDHGELQVAQQERTAEVDEMFKDIAVIISQKCINTKTQRPFPPQVVEQALRSIGAAVKL 149
Query: 438 NKNSKQQAL 446
+++ K+QAL
Sbjct: 150 DQSVKKQAL 158
>gi|156037574|ref|XP_001586514.1| hypothetical protein SS1G_12501 [Sclerotinia sclerotiorum 1980]
gi|154697909|gb|EDN97647.1| hypothetical protein SS1G_12501 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 245
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 134/294 (45%), Gaps = 94/294 (31%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI++TNV++VR KKA KRFEIACYKNKV+ WR+ EKDID VLQ VF NVS+
Sbjct: 3 INQPSNQIKLTNVSLVRYKKAKKRFEIACYKNKVLEWRSGNEKDIDNVLQIPNVFLNVSR 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
GQ A DL KAF D +Q
Sbjct: 63 GQTAPTADLAKAFGK----------------DTPIQ------------------------ 82
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+I IL KGELQ+ +KER +Q+E ++ +IV+ K ++ +TKR +T MIE
Sbjct: 83 -----DIILEILNKGELQVGEKERHAQLERVHNEVISIVASKLVDPKTKRVYTTGMIEKA 137
Query: 276 LKQI---------------------------------------HFSVNV--NKNSKQQAL 294
L+ + H V K++K QAL
Sbjct: 138 LEMLSSQGSQAQEKEKERNVGSENATPTTGEEGEAKPIPRAREHAWTGVVATKSAKSQAL 197
Query: 295 EVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGG 346
E + L Q + + RA+MR+RV + K+ +++VK A +E GG
Sbjct: 198 EAMKALIAHQPIPVARARMRLRVTLPT------KILKQVVKSAGPKAGDEEEGG 245
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI++TNV++VR KKA KRFEIACYKNKV+ WR+ EKDID VLQ VF NVS+
Sbjct: 3 INQPSNQIKLTNVSLVRYKKAKKRFEIACYKNKVLEWRSGNEKDIDNVLQIPNVFLNVSR 62
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
GQ A DL KAF + T I +IL
Sbjct: 63 GQTAPTADLAKAFGKD--TPIQDIIL 86
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
LE+LN E+ GE+ER +Q+E ++ +IV+ K ++ +TKR +T MIE L+ +
Sbjct: 86 LEILNKGELQVGEKERHAQLERVHNEVISIVASKLVDPKTKRVYTTGMIEKALEML 141
>gi|398408399|ref|XP_003855665.1| hypothetical protein MYCGRDRAFT_68059 [Zymoseptoria tritici IPO323]
gi|339475549|gb|EGP90641.1| hypothetical protein MYCGRDRAFT_68059 [Zymoseptoria tritici IPO323]
Length = 327
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 159/370 (42%), Gaps = 121/370 (32%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P+NQI++TNV++VRMKK KRFE+ACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
SKGQ A +DLKKAF +T
Sbjct: 64 SKGQVAPNDDLKKAF-------PGMT---------------------------------- 82
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
+ EI IL KGE+Q+ +KERS ++E K++ IV+ + ++ ++KR +T MIE
Sbjct: 83 -----RDEIVLEILKKGEIQVGEKERSQELERVHKEVIEIVAGRLVDPKSKRVYTTGMIE 137
Query: 274 AGLKQI-----HFSVNVNKNS--------------------------------------- 289
L Q+ H K S
Sbjct: 138 KALDQLSSKSGHAGRTAGKGSGVEGGDRSKSRDQSAAATDSGSNTPARSNAEADAEAKAV 197
Query: 290 --------------KQQALEVIPTL--KQCMSIERAQMRVRVE-----VSAGVKDVKK-- 326
K QAL+ + L Q + + RA+MR+R+ + VK K
Sbjct: 198 ERAKWTGVVTTRSAKSQALDAMKALIAHQPIPVARARMRLRITCPTTVLKQTVKSAPKSE 257
Query: 327 --------LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLEL 378
+K+K++ VE+++ G + ++PG ++ + + + +T+G+ E+
Sbjct: 258 GEEATTGTVKDKILSLVEQVESQDVMGEEWECVGFVEPGSFKTLSDFISAQTKGRARAEV 317
Query: 379 LNLKEVTEGE 388
L++ EG+
Sbjct: 318 LDMAVTHEGD 327
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 63/90 (70%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P+NQI++TNV++VRMKK KRFE+ACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A +DLKKAF + EI IL K
Sbjct: 64 SKGQVAPNDDLKKAFPGMTRDEIVLEILKK 93
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
TR + LE+L E+ GE+ERS ++E K++ IV+ + ++ ++KR +T MIE L
Sbjct: 82 TRDEIVLEILKKGEIQVGEKERSQELERVHKEVIEIVAGRLVDPKSKRVYTTGMIEKALD 141
Query: 430 QI 431
Q+
Sbjct: 142 QL 143
>gi|367049494|ref|XP_003655126.1| hypothetical protein THITE_2118435 [Thielavia terrestris NRRL 8126]
gi|347002390|gb|AEO68790.1| hypothetical protein THITE_2118435 [Thielavia terrestris NRRL 8126]
Length = 373
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 98/178 (55%), Gaps = 45/178 (25%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ +VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPSVFLNVSKGQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +M +D+++
Sbjct: 66 APSAELAKAFGKDM------------SVDDIILE-------------------------- 87
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 276
IL KGELQ+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE L
Sbjct: 88 -------ILRKGELQVGEKERNAQLERVHAEVVSIVASKLVDPRTKRVYTPGMIEKAL 138
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ +VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPSVFLNVSKGQT 65
Query: 67 ANKEDLKKAFN 77
A +L KAF
Sbjct: 66 APSAELAKAFG 76
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 42/142 (29%)
Query: 282 SVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV--KDVKK----------- 326
V NK++K QAL+ + L Q + + RA+MR+R+ + GV + VK
Sbjct: 226 GVVTNKSAKSQALDAMRALIAHQPIPVARARMRLRITCATGVLKQAVKAPQRKQQQQQQQ 285
Query: 327 ---------------------------LKEKLVKCATSVENEEWSGGGLLLICLIDPGKY 359
+K+K++ VE+++ G ++ ++PG +
Sbjct: 286 AGDKTAEGGGGGGEGDGEGEQRAAAGTVKDKILSFVEQVESQDVIGSEWEVVGFVEPGAF 345
Query: 360 REIDELVRTETRGQGTLELLNL 381
+ + + + TET+GQG +E+L++
Sbjct: 346 KGLSDFISTETKGQGRVEVLDM 367
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK +D+++ LE+L E+ GE+ER++Q+E ++ +IV+ K ++ TK
Sbjct: 76 GKDMSVDDII---------LEILRKGELQVGEKERNAQLERVHAEVVSIVASKLVDPRTK 126
Query: 417 RPFTVSMIEAGL 428
R +T MIE L
Sbjct: 127 RVYTPGMIEKAL 138
>gi|340509320|gb|EGR34870.1| ribosome maturation protein SBDS, putative [Ichthyophthirius
multifiliis]
Length = 400
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 112/220 (50%), Gaps = 46/220 (20%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
PT I++TNVA ++ K FEI CYKNK I+WRN +E
Sbjct: 5 PTGIIQLTNVAFIKYKINKMSFEIVCYKNKAINWRNGVE--------------------- 43
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KDI EVLQ ++T+ S G A K DL+K F
Sbjct: 44 -------------------------KDISEVLQVDEIYTSASHGTIAKKADLQKYFENMK 78
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
+ EI KLIL KGELQ+ +KER+ Q N + DI I++EKC++ ++ R F V+ I+ +K
Sbjct: 79 KMEIIKLILEKGELQMGEKERAVQQSNIYNDIVNIITEKCVHPDSNRKFPVNQIQQAMKS 138
Query: 279 IHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVS 318
I+F V ++ +K+QALE I L + ++RA + V V V
Sbjct: 139 INFVVKNDQPAKKQALECIKILTKKYYMKRADILVSVSVP 178
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
PT I++TNVA ++ K FEI CYKNK I+WRN +EKDI EVLQ ++T+ S G
Sbjct: 5 PTGIIQLTNVAFIKYKINKMSFEIVCYKNKAINWRNGVEKDISEVLQVDEIYTSASHGTI 64
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A K DL+K F + EI KLIL K
Sbjct: 65 AKKADLQKYFENMKKMEIIKLILEK 89
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ GE+ER+ Q N + DI I++EKC++ ++ R F V+ I+ +K I+F V
Sbjct: 86 ILEKGELQMGEKERAVQQSNIYNDIVNIITEKCVHPDSNRKFPVNQIQQAMKSINFVVKN 145
Query: 438 NKNSKQQALE 447
++ +K+QALE
Sbjct: 146 DQPAKKQALE 155
>gi|401406079|ref|XP_003882489.1| zinc finger (C2H2 type) domain-containing protein [Neospora caninum
Liverpool]
gi|325116904|emb|CBZ52457.1| zinc finger (C2H2 type) domain-containing protein [Neospora caninum
Liverpool]
Length = 795
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 11/225 (4%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P Q+R+TNVA+VR+++ G RFE+ACYKNKV++WR IE D+ EVLQT+ VF NVSKG+
Sbjct: 6 PVTQVRLTNVAVVRLRQHGHRFEVACYKNKVLNWRAGIEDDLREVLQTNAVFHNVSKGEF 65
Query: 159 ANKEDLKKAFNT-NMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 217
A ++ L FNT + I + + K T +
Sbjct: 66 AKRDALLAVFNTVDQERICKIILDKGKSSPSPASERTAAADALPPGLLRLASRIHGVAAP 125
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
D + C ELQ+S+KER + + +D+ ++V E +N T P T + + LK
Sbjct: 126 DASTPC-------ELQVSEKERQAALAAALQDVISLVIEMTVNVRTGLPLTRTAAASALK 178
Query: 278 QIHFSVNVNKNSKQQALEVIPTLKQCM---SIERAQMRVRVEVSA 319
Q F V + SK QAL+ + L++ + +I R MR++ E +A
Sbjct: 179 QAGFGVKLGVASKAQALKAVVLLQRKLGPDAIARRMMRLKAECAA 223
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/88 (57%), Positives = 66/88 (75%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P Q+R+TNVA+VR+++ G RFE+ACYKNKV++WR IE D+ EVLQT+ VF NVSKG+
Sbjct: 6 PVTQVRLTNVAVVRLRQHGHRFEVACYKNKVLNWRAGIEDDLREVLQTNAVFHNVSKGEF 65
Query: 67 ANKEDLKKAFNTEDQTEICKLILMKDMS 94
A ++ L FNT DQ ICK+IL K S
Sbjct: 66 AKRDALLAVFNTVDQERICKIILDKGKS 93
>gi|70940405|ref|XP_740623.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518461|emb|CAH75993.1| hypothetical protein PC000216.01.0 [Plasmodium chabaudi chabaudi]
Length = 140
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 46/185 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N E +ID+VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGNELNIDDVLQSHLIFTN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
+SKG+ A K L F
Sbjct: 61 ISKGEIAKKSQLNSCF-------------------------------------------- 76
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
N++D EICK IL KG LQIS++ER+ E +KDI ++ E +N +T P + +MI
Sbjct: 77 --NSDDNYEICKTILEKGTLQISNRERTILKEKMYKDIIEMLHEMSVNPQTGYPLSTNMI 134
Query: 273 EAGLK 277
E+ K
Sbjct: 135 ESNQK 139
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 68/96 (70%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N E +ID+VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGNELNIDDVLQSHLIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
+SKG+ A K L FN++D EICK IL K +I
Sbjct: 61 ISKGEIAKKSQLNSCFNSDDNYEICKTILEKGTLQI 96
>gi|340053347|emb|CCC47635.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 464
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 148/313 (47%), Gaps = 67/313 (21%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
+++ P +Q R TNVA VR K G + E+ACYKNKV+S+R+ +
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYSKNGVKLEVACYKNKVLSFRSGV----------------- 45
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
E +DEVLQ +FTN+S+G A+ +D++
Sbjct: 46 -----------------------------ESRLDEVLQIDRIFTNISRGLFASSKDIQNV 76
Query: 214 FNTEDQTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
F E K IL+ GELQ++ +ER ++++ F DI+ I+S+KCI+ T+RPF +I
Sbjct: 77 FGVGTTNEDAIKFILLHGELQVARQEREAEVDQMFTDISVIISQKCISEVTRRPFPPHVI 136
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEK 330
E L+ I V +++ +K+QAL ++ L Q + I R+ M++R S+ K L
Sbjct: 137 EQALRSIGAGVKLDQPAKKQALALMHKLIDSQIIPITRSPMKLRFITSSDAALTKLLTWC 196
Query: 331 LVKCATSVENE-------------EWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLE 377
A+ +E+ ++S + L+ P +R ++ V++E T+
Sbjct: 197 EANGASVLESTGDASTDSPAEKDVQYS-----FVLLLQPHLFRNLENYVKSELGEGSTVH 251
Query: 378 LLNLKEVTEGEEE 390
+L V GE +
Sbjct: 252 MLECAAVDYGESD 264
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
+++ P +Q R TNVA VR K G + E+ACYKNKV+S+R+ +E +DEVLQ +FTN+
Sbjct: 3 ARMQVPLSQRRHTNVAAVRYSKNGVKLEVACYKNKVLSFRSGVESRLDEVLQIDRIFTNI 62
Query: 62 SKGQAANKEDLKKAFNTEDQTE-ICKLILM 90
S+G A+ +D++ F E K IL+
Sbjct: 63 SRGLFASSKDIQNVFGVGTTNEDAIKFILL 92
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 383 EVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSK 442
E+ +ER ++++ F DI+ I+S+KCI+ T+RPF +IE L+ I V +++ +K
Sbjct: 95 ELQVARQEREAEVDQMFTDISVIISQKCISEVTRRPFPPHVIEQALRSIGAGVKLDQPAK 154
Query: 443 QQAL 446
+QAL
Sbjct: 155 KQAL 158
>gi|346322099|gb|EGX91698.1| UPF0023 family protein [Cordyceps militaris CM01]
Length = 297
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 152/351 (43%), Gaps = 122/351 (34%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE
Sbjct: 1 MSRINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIET-------------- 46
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
D+D VLQ VF N
Sbjct: 47 --------------------------------DLDNVLQIPNVFLN-------------- 60
Query: 213 AFNTEDQT-EICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
AF + T EI IL KGE Q+ +KER++Q+E ++ +IV+ K ++ TKR +T M
Sbjct: 61 AFGKKMTTNEIILEILKKGEQQVGEKERAAQLERINNEVISIVASKLVDPRTKRVYTSGM 120
Query: 272 IEAGL----KQIHFS-----------------------------------------VNVN 286
IE L Q H + V+
Sbjct: 121 IEKALDMLSSQAHTTDTKDKAADKGSAADKGGVAGTPATGEDSEAKPPPKEHSWTGVSTT 180
Query: 287 KNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV-----KDVKK---------LKEK 330
K++K QALE + L Q + + RA+MR+R+ V K V K +K+K
Sbjct: 181 KSAKSQALEAMKALIAHQPIPVARARMRLRISCGTSVLKQAAKHVAKEDGEHQKGTVKDK 240
Query: 331 LVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++ VE ++ G ++ ++PG ++ + + + ET+GQG +E+L++
Sbjct: 241 ILSYIEQVETQDVVGSDWEVVGFVEPGAFKPLSDFIGNETKGQGRVEVLDM 291
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS+I P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF N
Sbjct: 1 MSRINQPSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFLN 60
Query: 61 V 61
Sbjct: 61 A 61
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL 428
LE+L E GE+ER++Q+E ++ +IV+ K ++ TKR +T MIE L
Sbjct: 73 LEILKKGEQQVGEKERAAQLERINNEVISIVASKLVDPRTKRVYTSGMIEKAL 125
>gi|452986210|gb|EME85966.1| hypothetical protein MYCFIDRAFT_202340 [Pseudocercospora fijiensis
CIRAD86]
Length = 321
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 152/357 (42%), Gaps = 116/357 (32%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P+NQI++TNV++VRMKK KRFE+ACYKN V ++R
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTAFR-------------------- 43
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
S E ++D+VLQ VF NVSKGQ A ++LKKA
Sbjct: 44 --------------------------SGTETNLDDVLQIPNVFLNVSKGQVAPNDELKKA 77
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
F + E+ IL KGE+Q+ +KER ++E K++ IV+ + ++ +TKR +T MIE
Sbjct: 78 FPGMTRDEVVLEILKKGEIQVGEKERGQELERVHKEVLEIVAGRLVDPKTKRVYTTGMIE 137
Query: 274 AGLKQI-----HFSVNVNKNS--------------------------------------- 289
L Q+ H K S
Sbjct: 138 KSLDQLSSQGGHAGRGPAKGSAGGADRSQSRDQSAPAESGSSTPARNGEIEEKEKPKPKW 197
Query: 290 ---------KQQALEVIPTL--KQCMSIERAQMRVRVEVSAGV--KDVK----------- 325
K QAL+ I L Q + + RA+MR+R+ + + VK
Sbjct: 198 TGVVTTRSAKSQALDAIKALIAHQPIPVARARMRLRITCPTSILKQSVKTPAAKEGEEPQ 257
Query: 326 --KLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
+KEK++ VE E+ +G + + PG+Y+ + + T+G+ E+L+
Sbjct: 258 TCTVKEKILGFVEQVETEDTAGSEWECVGFVVPGEYKTLSAFISEHTKGKARAEVLD 314
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 65/90 (72%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P+NQI++TNV++VRMKK KRFE+ACYKN V ++R+ E ++D+VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTAFRSGTETNLDDVLQIPNVFLNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A ++LKKAF + E+ IL K
Sbjct: 64 SKGQVAPNDELKKAFPGMTRDEVVLEILKK 93
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
TR + LE+L E+ GE+ER ++E K++ IV+ + ++ +TKR +T MIE L
Sbjct: 82 TRDEVVLEILKKGEIQVGEKERGQELERVHKEVLEIVAGRLVDPKTKRVYTTGMIEKSLD 141
Query: 430 QI 431
Q+
Sbjct: 142 QL 143
>gi|70992761|ref|XP_751229.1| UPF0023 family protein [Aspergillus fumigatus Af293]
gi|66848862|gb|EAL89191.1| UPF0023 family protein [Aspergillus fumigatus Af293]
Length = 344
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 159/382 (41%), Gaps = 142/382 (37%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+D VLQ T+F +VSK Q A +L KAF
Sbjct: 45 ----------------------------KDLDNVLQVPTIFLSVSKAQTAPSAELTKAFG 76
Query: 216 TE-DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T MI
Sbjct: 77 PNVSADEIRQEILRKGEVQVGERERKEMLERVEKEVLDIVSGRLVDPNTKRVYTPGMISK 136
Query: 275 GLKQIHFS---------------------------------VNVNKNSKQQALEVIPTL- 300
L Q+ + V NK++K QALE + L
Sbjct: 137 ALDQLSSASGQQQMQQEGNGNGNGAGDENGPAQPRKPLWTGVTPNKSAKSQALEAMKALI 196
Query: 301 -KQCMSIERAQMRVRV-------------------------------------------- 315
Q + + RA+MR+RV
Sbjct: 197 AWQPIPVMRARMRLRVTCPVALLKQSVKAAAAPGPNKEREGPSGGAKNNKKGGKGGKGKA 256
Query: 316 ------EVSAGVKDVK---------KLKEKLVKCATSVENEEWSGGG-LLLICLIDPGKY 359
+V AG D + +K+K++ SVE++E GG ++ +PG +
Sbjct: 257 VRQQDSDVEAGGSDAEMAPALKAPTNVKDKIMSFIESVESQEVVGGDEWEVVGFAEPGAF 316
Query: 360 REIDELVRTETRGQGTLELLNL 381
+ ++E + TETRG+G +E+L++
Sbjct: 317 KGLNEFIGTETRGRGRVEVLDM 338
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNT 78
Q A +L KAF
Sbjct: 63 AQTAPSAELTKAFGP 77
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
E+L EV GE ER +E K++ IVS + ++ TKR +T MI L Q+
Sbjct: 87 EILRKGEVQVGERERKEMLERVEKEVLDIVSGRLVDPNTKRVYTPGMISKALDQL 141
>gi|323456045|gb|EGB11912.1| hypothetical protein AURANDRAFT_3422, partial [Aureococcus
anophagefferens]
Length = 179
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 47/222 (21%)
Query: 95 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
++ TP N++ +++V +VR+++ G RFE+ACY NKV+ +R+ E
Sbjct: 4 RVGTPMNKVVLSSVNVVRLQRGGGRFEVACYPNKVVDYRSGTET---------------- 47
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
D+DEVLQ TVF NVSKG A K+DL K F
Sbjct: 48 ------------------------------DLDEVLQIRTVFKNVSKGVATPKKDLAKVF 77
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
++C+ IL G+LQ+S +ER + E +D+A IV+E+ ++ T + +E
Sbjct: 78 PKMSVDDVCREILRSGQLQVSARERGAASEALIRDVAGIVAERVVDAATGAFLPPASVER 137
Query: 275 GLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRV 315
L+ + +F+ + +++KQQAL+VI L++ + RA M +RV
Sbjct: 138 LLRDEANFAPSATRSAKQQALDVIKILERDHGLRRAPMELRV 179
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 61/87 (70%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
++ TP N++ +++V +VR+++ G RFE+ACY NKV+ +R+ E D+DEVLQ TVF NVS
Sbjct: 4 RVGTPMNKVVLSSVNVVRLQRGGGRFEVACYPNKVVDYRSGTETDLDEVLQIRTVFKNVS 63
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLIL 89
KG A K+DL K F ++C+ IL
Sbjct: 64 KGVATPKKDLAKVFPKMSVDDVCREIL 90
>gi|159130316|gb|EDP55429.1| UPF0023 family protein [Aspergillus fumigatus A1163]
Length = 344
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 159/382 (41%), Gaps = 142/382 (37%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAE------------------ 44
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
KD+D VLQ T+F +VSK Q A +L KAF
Sbjct: 45 ----------------------------KDLDNVLQVPTIFLSVSKAQTAPSAELTKAFG 76
Query: 216 TE-DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
EI + IL KGE+Q+ ++ER +E K++ IVS + ++ TKR +T MI
Sbjct: 77 PNVSADEIRQEILRKGEVQVGERERKEMLERVEKEVLDIVSGRLVDPNTKRVYTPGMISK 136
Query: 275 GLKQIHFS---------------------------------VNVNKNSKQQALEVIPTL- 300
L Q+ + V NK++K QALE + L
Sbjct: 137 ALDQLSSASGQQQMQQEGNGNGNGAGDENGPAQPRKPLWTGVTPNKSAKSQALEAMKALI 196
Query: 301 -KQCMSIERAQMRVRV-------------------------------------------- 315
Q + + RA+MR+RV
Sbjct: 197 AWQPIPVMRARMRLRVTCPVALLKQSVKAAAAPGPNKEREGPSGGAKNNKKGGKGGKGKA 256
Query: 316 ------EVSAGVKDVK---------KLKEKLVKCATSVENEEWSGGG-LLLICLIDPGKY 359
+V AG D + +K++++ SVE++E GG ++ +PG +
Sbjct: 257 VRQQDSDVEAGGSDAEMAPALKAPTNVKDRIMSFIESVESQEVVGGDEWEVVGFAEPGAF 316
Query: 360 REIDELVRTETRGQGTLELLNL 381
+ ++E + TETRG+G +E+L++
Sbjct: 317 KGLNEFIGTETRGRGRVEVLDM 338
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNT 78
Q A +L KAF
Sbjct: 63 AQTAPSAELTKAFGP 77
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
E+L EV GE ER +E K++ IVS + ++ TKR +T MI L Q+
Sbjct: 87 EILRKGEVQVGERERKEMLERVEKEVLDIVSGRLVDPNTKRVYTPGMISKALDQL 141
>gi|452845081|gb|EME47014.1| hypothetical protein DOTSEDRAFT_69108 [Dothistroma septosporum
NZE10]
Length = 334
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 106/205 (51%), Gaps = 51/205 (24%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P+NQI++TNV++VRMKK KR+EIACYKN V S+R EKD+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRYEIACYKNTVTSFRAGNEKDLDNVLQIPNVFLNV 63
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
SKGQ A EDLKK+F +T
Sbjct: 64 SKGQVAPNEDLKKSF-------PGMT---------------------------------- 82
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
+ EI IL KGE+Q+ +KERS ++E K++ IV+ + ++ ++KR +T MIE
Sbjct: 83 -----RDEIVLEILKKGEIQVGEKERSQELERVHKEVIEIVAGRLVDPKSKRVYTAGMIE 137
Query: 274 AGLKQI-----HFSVNVNKNSKQQA 293
L Q+ H K SK+ A
Sbjct: 138 KALDQLSSQGGHAGRGAGKGSKEIA 162
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 64/90 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P+NQI++TNV++VRMKK KR+EIACYKN V S+R EKD+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRYEIACYKNTVTSFRAGNEKDLDNVLQIPNVFLNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A EDLKK+F + EI IL K
Sbjct: 64 SKGQVAPNEDLKKSFPGMTRDEIVLEILKK 93
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
TR + LE+L E+ GE+ERS ++E K++ IV+ + ++ ++KR +T MIE L
Sbjct: 82 TRDEIVLEILKKGEIQVGEKERSQELERVHKEVIEIVAGRLVDPKSKRVYTAGMIEKALD 141
Query: 430 QI-----HFSVNVNKNSKQQALEEDKT 451
Q+ H K SK+ A D++
Sbjct: 142 QLSSQGGHAGRGAGKGSKEIAEGSDRS 168
>gi|71032465|ref|XP_765874.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352831|gb|EAN33591.1| hypothetical protein, conserved [Theileria parva]
Length = 391
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 159/341 (46%), Gaps = 86/341 (25%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F PT Q+R TNVAIVR+K G+RFEIACYKNKV +W++ IE DI+E N
Sbjct: 1 MCGLFQPTCQVRFTNVAIVRLKVKGERFEIACYKNKVFNWKSGIENDIEERC------VN 54
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
S G+ AN + L AFNT +N+
Sbjct: 55 YSIGKLANNKQLLTAFNTTDINV------------------------------------- 77
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
I K IL KGE Q+S +ER +++ F DI TI+ E IN +T + +M+
Sbjct: 78 ---------IIKQILDKGEYQVSKEEREQLLKSIFNDIITILHEITINPQTGNSLSRTML 128
Query: 273 EAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRV--------------- 315
E LK FS+++NK++K Q+L+ + TL+Q I+R +M++++
Sbjct: 129 ENALKSSGFSISLNKSTKIQSLKALQTLQQKYPNLIQRCKMKLKLNFQSSQYYQVLSFIN 188
Query: 316 --EVSAGVKDVKKL----------KEKLVKCATSVENEEWSGGGLLLICLIDPGKYREID 363
S + D + +++ + A + E + + +IC P Y+ ++
Sbjct: 189 NHNASNHLTDSSENFSASSESSSPQQRGGESADDIIIESKNNDSMTVICF--PNLYKNLE 246
Query: 364 ELVRTETRGQGTLEL--LNLKE-VTEGEEERSSQIENQFKD 401
++ E G ++L LN+K+ V +R+ EN F++
Sbjct: 247 NFIQNELDPPGNIQLVTLNIKQNVNNANLQRNLSSENSFEN 287
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 58/91 (63%), Gaps = 6/91 (6%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F PT Q+R TNVAIVR+K G+RFEIACYKNKV +W++ IE DI+E N
Sbjct: 1 MCGLFQPTCQVRFTNVAIVRLKVKGERFEIACYKNKVFNWKSGIENDIEERC------VN 54
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
S G+ AN + L AFNT D I K IL K
Sbjct: 55 YSIGKLANNKQLLTAFNTTDINVIIKQILDK 85
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
++L+ E +EER +++ F DI TI+ E IN +T + +M+E LK FS++
Sbjct: 81 QILDKGEYQVSKEEREQLLKSIFNDIITILHEITINPQTGNSLSRTMLENALKSSGFSIS 140
Query: 437 VNKNSKQQALEEDKT-SGIYSSLYKACK 463
+NK++K Q+L+ +T Y +L + CK
Sbjct: 141 LNKSTKIQSLKALQTLQQKYPNLIQRCK 168
>gi|134077512|emb|CAK96656.1| unnamed protein product [Aspergillus niger]
Length = 330
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 115/231 (49%), Gaps = 60/231 (25%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E
Sbjct: 6 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAE--------------------- 44
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
KD+D VLQ T+F +VSK Q A +L KAF +
Sbjct: 45 -------------------------KDLDNVLQVPTIFLSVSKAQTAPSAELTKAFGADT 79
Query: 219 QT-EICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
EI + IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI L
Sbjct: 80 PADEIRQEILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKALD 139
Query: 278 QIHFS-----------VNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRV 315
Q+ + V NK++K QALE + L Q + + RA+MR+RV
Sbjct: 140 QLSSASGQQQKPLWTGVTANKSAKSQALEAMKALIAWQPIPVMRARMRLRV 190
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK Q
Sbjct: 6 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQT 65
Query: 67 ANKEDLKKAFNTEDQT-EICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 66 APSAELTKAFGADTPADEIRQEILRK 91
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS-- 434
E+L EV GE ER IE K++ IVS + ++ TKR +T MI L Q+ +
Sbjct: 87 EILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKALDQLSSASG 146
Query: 435 ---------VNVNKNSKQQALE 447
V NK++K QALE
Sbjct: 147 QQQKPLWTGVTANKSAKSQALE 168
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 318 SAGVKDVKKLKEKLVKCATSVENEEWSGGGLL-LICLIDPGKYREIDELVRTETRGQGTL 376
SA K +K+K++ S+E +E GG +I +PG ++ ++E V ETRG+G +
Sbjct: 253 SAPAKGPSNVKDKILSYIESIEAQEVVGGDEWEIIGFAEPGAFKGLNEFVGNETRGRGRV 312
Query: 377 ELLNL 381
E+L++
Sbjct: 313 EVLDM 317
>gi|320587889|gb|EFX00364.1| upf0023 family protein [Grosmannia clavigera kw1407]
Length = 358
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 124/273 (45%), Gaps = 89/273 (32%)
Query: 93 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 151
MS+ I P +QI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRNINQPVSQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 152 NVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLK 211
NVSKGQ+A +L KAF + S VL+
Sbjct: 61 NVSKGQSAPTAELIKAFGADATTESV-----------VLE-------------------- 89
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
IL KGE+Q+ DKER++Q+E ++ +V+ K ++ T+R +T M
Sbjct: 90 --------------ILRKGEMQVGDKERAAQLERVHHEVIDLVAGKLVDPRTRRVYTTGM 135
Query: 272 IEAGLKQI------HF-----------------------------------SVNVNKNSK 290
IE L I H V K++K
Sbjct: 136 IEKALDMISTQAHQHHQGGGAAATAAAAAAAAAAAEGETPAEAPVKTPMWTGVTTAKSAK 195
Query: 291 QQALEVIPTL--KQCMSIERAQMRVRVEVSAGV 321
QAL+ + L Q + + RA+MR+RV + V
Sbjct: 196 SQALDAMKALVALQPIPVMRARMRLRVSCTTSV 228
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 1 MSK-IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFT 59
MS+ I P +QI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ VF
Sbjct: 1 MSRNINQPVSQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPNVFL 60
Query: 60 NVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
NVSKGQ+A +L KAF + TE L +++
Sbjct: 61 NVSKGQSAPTAELIKAFGADATTESVVLEILR 92
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
LE+L E+ G++ER++Q+E ++ +V+ K ++ T+R +T MIE L I
Sbjct: 88 LEILRKGEMQVGDKERAAQLERVHHEVIDLVAGKLVDPRTRRVYTTGMIEKALDMI 143
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 327 LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+K++++ VE+++ G + ++PG Y+ + + V ETRGQG +E+L++
Sbjct: 298 VKDRILGYIEQVESQDVIGSTWEVAGFVEPGAYKALSDFVSNETRGQGRVEVLDV 352
>gi|367027766|ref|XP_003663167.1| hypothetical protein MYCTH_2304703 [Myceliophthora thermophila ATCC
42464]
gi|347010436|gb|AEO57922.1| hypothetical protein MYCTH_2304703 [Myceliophthora thermophila ATCC
42464]
Length = 341
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 95/182 (52%), Gaps = 47/182 (25%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIET-------------------- 45
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
D+D VLQ +VF NVSKGQ A +L KAF +
Sbjct: 46 --------------------------DLDNVLQIPSVFLNVSKGQTAPSAELAKAFGKDK 79
Query: 219 QTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
+ I IL KGELQ+ +KER++Q+E ++ +IV+ K ++ TKR +T MIE L
Sbjct: 80 SVDDIILEILRKGELQVGEKERTAQLERVHNEVVSIVASKLVDPRTKRVYTPGMIEKALD 139
Query: 278 QI 279
+
Sbjct: 140 ML 141
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 56/71 (78%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI++TNV++VR+KK KRFEIACYKNKV+ WR+ IE D+D VLQ +VF NVSKGQ
Sbjct: 6 PSNQIKLTNVSLVRLKKGKKRFEIACYKNKVLEWRSGIETDLDNVLQIPSVFLNVSKGQT 65
Query: 67 ANKEDLKKAFN 77
A +L KAF
Sbjct: 66 APSAELAKAFG 76
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 24/132 (18%)
Query: 274 AGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRV--------------EV 317
A K V NK++K QALE + L Q + + RA+MR+RV +
Sbjct: 204 AAPKPTWTGVTTNKSAKSQALEAMKALIAHQPIPVARARMRLRVTCPTNVLKQAIKAPKA 263
Query: 318 SAGV--------KDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTE 369
AG K +K++++ VE+++ G ++ ++PG ++ + + V E
Sbjct: 264 PAGTDGGGDGEQKAPGTVKDRILSFIEQVESQDVMGFEWEIVGFVEPGAFKGLSDFVGGE 323
Query: 370 TRGQGTLELLNL 381
T+GQG +E+L++
Sbjct: 324 TKGQGRVEVLDM 335
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + +D+++ LE+L E+ GE+ER++Q+E ++ +IV+ K ++ TK
Sbjct: 76 GKDKSVDDII---------LEILRKGELQVGEKERTAQLERVHNEVVSIVASKLVDPRTK 126
Query: 417 RPFTVSMIEAGLKQI 431
R +T MIE L +
Sbjct: 127 RVYTPGMIEKALDML 141
>gi|121700284|ref|XP_001268407.1| UPF0023 family protein [Aspergillus clavatus NRRL 1]
gi|119396549|gb|EAW06981.1| UPF0023 family protein [Aspergillus clavatus NRRL 1]
Length = 343
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 119/253 (47%), Gaps = 81/253 (32%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK Q
Sbjct: 6 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQT 65
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF SS+TS DE+ Q
Sbjct: 66 APSAELTKAFG------SSMTS------DEIRQE-------------------------- 87
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + I+ TKR +T MI L Q
Sbjct: 88 -------ILRKGEVQVGERERKEMLERVEKEVLDIVSGRLIDPNTKRVYTPGMISKALDQ 140
Query: 279 IHFS----------------------------------VNVNKNSKQQALEVIPTL--KQ 302
+ + V K++K QALE + L Q
Sbjct: 141 LSSASGQQQQQQQQEGNGGAAAAEENGSTQPRKPLWTGVTPTKSAKSQALEAMKALIAWQ 200
Query: 303 CMSIERAQMRVRV 315
+ + RA+MR+RV
Sbjct: 201 PIPVMRARMRLRV 213
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 55/72 (76%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK Q
Sbjct: 6 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSKAQT 65
Query: 67 ANKEDLKKAFNT 78
A +L KAF +
Sbjct: 66 APSAELTKAFGS 77
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 327 LKEKLVKCATSVENEEWSGGGLL-LICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+K+K++ SVE++E GG ++ +PG ++ ++E V TET+G+G +E+L++
Sbjct: 282 VKDKIMSYIESVESQEVVGGDEWEVVGFAEPGAFKGLNEFVGTETKGRGRVEVLDM 337
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 431
E+L EV GE ER +E K++ IVS + I+ TKR +T MI L Q+
Sbjct: 87 EILRKGEVQVGERERKEMLERVEKEVLDIVSGRLIDPNTKRVYTPGMISKALDQL 141
>gi|401887935|gb|EJT51908.1| 35S primary transcript processing-related protein [Trichosporon
asahii var. asahii CBS 2479]
gi|406699455|gb|EKD02658.1| 35S primary transcript processing-related protein [Trichosporon
asahii var. asahii CBS 8904]
Length = 200
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 115/214 (53%), Gaps = 55/214 (25%)
Query: 122 IACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNMLNISSLTSF 181
IACYKNKV +R+ +EKD+ EV+Q +FTNV KGQ A K+D KAF ++
Sbjct: 16 IACYKNKVNEFRSGVEKDLSEVIQIEQIFTNVPKGQVAKKDDWTKAFGSD---------- 65
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++D+VL+ +GELQ+++ ER
Sbjct: 66 ---NMDKVLE-------------------------------------EGELQVNNLERGH 85
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
Q+ + ++IAT+V+E ++ TKR TV M+E + +I +S +K +K QAL++I L
Sbjct: 86 QLASLSREIATLVAEMTVDPATKRKHTVGMVEKAMTEIGYSTRADKTAKAQALDLIRQLS 145
Query: 302 Q---CMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
Q + +ER +MRVR+ + A KD K++KEKL+
Sbjct: 146 QPDSVLPVERVRMRVRITMPA--KDAKRIKEKLM 177
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%)
Query: 30 IACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEIC 85
IACYKNKV +R+ +EKD+ EV+Q +FTNV KGQ A K+D KAF +++ ++
Sbjct: 16 IACYKNKVNEFRSGVEKDLSEVIQIEQIFTNVPKGQVAKKDDWTKAFGSDNMDKVL 71
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 373 QGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 432
+G L++ NL ER Q+ + ++IAT+V+E ++ TKR TV M+E + +I
Sbjct: 73 EGELQVNNL--------ERGHQLASLSREIATLVAEMTVDPATKRKHTVGMVEKAMTEIG 124
Query: 433 FSVNVNKNSKQQALE 447
+S +K +K QAL+
Sbjct: 125 YSTRADKTAKAQALD 139
>gi|238567414|ref|XP_002386236.1| hypothetical protein MPER_15596 [Moniliophthora perniciosa FA553]
gi|215437591|gb|EEB87166.1| hypothetical protein MPER_15596 [Moniliophthora perniciosa FA553]
Length = 146
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
+ + RE ++D+VLQ +VF NVSKG+ A DL+KAF T D EI K IL KGE+Q+ +K
Sbjct: 1 MPTRRETNLDDVLQISSVFVNVSKGEMAKHNDLQKAFGTTDVHEIVKEILKKGEVQVGEK 60
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
ER + + K+IAT+V+EKC++ T+RP+ V +IE + + FS+ +KN+K Q I
Sbjct: 61 EREHDLASLRKEIATLVAEKCVDPSTQRPYPVGIIEKAMAEAGFSIKQDKNAKSQVSVCI 120
Query: 298 PTLKQC--MSIERAQMRVRV 315
L+ + I+RA+MRVRV
Sbjct: 121 KALQSDSKLPIQRARMRVRV 140
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+L EV GE+ER + + K+IAT+V+EKC++ T+RP+ V +IE + + FS+
Sbjct: 48 EILKKGEVQVGEKEREHDLASLRKEIATLVAEKCVDPSTQRPYPVGIIEKAMAEAGFSIK 107
Query: 437 VNKNSKQQ 444
+KN+K Q
Sbjct: 108 QDKNAKSQ 115
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 91
E ++D+VLQ +VF NVSKG+ A DL+KAF T D EI K IL K
Sbjct: 6 ETNLDDVLQISSVFVNVSKGEMAKHNDLQKAFGTTDVHEIVKEILKK 52
>gi|356551193|ref|XP_003543962.1| PREDICTED: LOW QUALITY PROTEIN: ribosome maturation protein
SBDS-like [Glycine max]
Length = 259
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 72/314 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG-Q 157
P Q R+TNVA+V +KK FEIAC N V+S VLQ+HTV+T SKG
Sbjct: 8 PIGQKRLTNVAVVCLKKHDMHFEIACSLNTVLS----------XVLQSHTVYTKFSKGVL 57
Query: 158 AANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 217
A + ++L AF + +
Sbjct: 58 AKSSKELIAAFGID---------------------------------------------D 72
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 277
D + IC IL KGEL ++ KER S + +Q +DI TI K N ET+ P+T+SMIE ++
Sbjct: 73 DHSXICLDILKKGELXVAGKERESLLSSQSRDIVTITMLKTSNPETQCPYTISMIERLMR 132
Query: 278 QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATS 337
+IHF+V+ + SK+QALE+I L + I R V+A +L KL + +
Sbjct: 133 EIHFAVDPHSTSKKQALELIQELLKHFPIRR--------VTALEDQELELLGKLNEWNAT 184
Query: 338 VENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIE- 396
V ++E S L +I ++PG Y++ + + G+ E+L +EE +Q+E
Sbjct: 185 VISKEGSSAXLYVIFELEPGLYKDCHDFDMNKMHGR--FEVL----AHFLDEEGDTQVEQ 238
Query: 397 -NQFKDIATIVSEK 409
N +KDI + + E+
Sbjct: 239 YNDYKDIPSPLPEE 252
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
L++L E+ +ER S + +Q +DI TI K N ET+ P+T+SMIE +++IHF+V
Sbjct: 79 LDILKKGELXVAGKERESLLSSQSRDIVTITMLKTSNPETQCPYTISMIERLMREIHFAV 138
Query: 436 NVNKNSKQQALE 447
+ + SK+QALE
Sbjct: 139 DPHSTSKKQALE 150
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 12/87 (13%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKG-Q 65
P Q R+TNVA+V +KK FEIAC N V+S VLQ+HTV+T SKG
Sbjct: 8 PIGQKRLTNVAVVCLKKHDMHFEIACSLNTVLS----------XVLQSHTVYTKFSKGVL 57
Query: 66 AANKEDLKKAFNT-EDQTEICKLILMK 91
A + ++L AF +D + IC IL K
Sbjct: 58 AKSSKELIAAFGIDDDHSXICLDILKK 84
>gi|453087766|gb|EMF15807.1| Shwachman-Bodian-diamond syndrome protein [Mycosphaerella populorum
SO2202]
Length = 327
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 100/186 (53%), Gaps = 46/186 (24%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P+NQI++TNV++VRMKK KRFE+ACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
SKGQ AN ED+KKAF +T
Sbjct: 64 SKGQVANNEDIKKAF-------PGMT---------------------------------- 82
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
+ E+ IL KGE+Q+ +KERS +++ K++ IV+ + ++ ++KR +T MIE
Sbjct: 83 -----RDEVVLEILKKGEIQVGEKERSQELDRVHKEVIDIVAGRLVDPKSKRVYTTGMIE 137
Query: 274 AGLKQI 279
L Q+
Sbjct: 138 KALDQL 143
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P+NQI++TNV++VRMKK KRFE+ACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIKLTNVSLVRMKKGKKRFEVACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ AN ED+KKAF + E+ IL K
Sbjct: 64 SKGQVANNEDIKKAFPGMTRDEVVLEILKK 93
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
TR + LE+L E+ GE+ERS +++ K++ IV+ + ++ ++KR +T MIE L
Sbjct: 82 TRDEVVLEILKKGEIQVGEKERSQELDRVHKEVIDIVAGRLVDPKSKRVYTTGMIEKALD 141
Query: 430 QI 431
Q+
Sbjct: 142 QL 143
>gi|358366502|dbj|GAA83123.1| UPF0023 family protein [Aspergillus kawachii IFO 4308]
Length = 342
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 117/252 (46%), Gaps = 77/252 (30%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF + DE+ Q
Sbjct: 63 AQTAPSAELTKAFGADT------------PADEIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKA 137
Query: 276 LKQIHFS------------------------------VNVNKNSKQQALEVIPTL--KQC 303
L Q+ + V NK++K QALE + L Q
Sbjct: 138 LDQLSSASGQQSQTPGNGETDGDNSEESRPRKPLWTGVTANKSAKSQALEAMKALIAWQP 197
Query: 304 MSIERAQMRVRV 315
+ + RA+MR+RV
Sbjct: 198 IPVMRARMRLRV 209
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT-EICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 63 AQTAPSAELTKAFGADTPADEIRQEILRK 91
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 318 SAGVKDVKKLKEKLVKCATSVENEEWSGGGLL-LICLIDPGKYREIDELVRTETRGQGTL 376
SA K +K+K++ S+E +E GG +I +PG ++ ++E V ETRG+G +
Sbjct: 272 SAPAKGPSNVKDKILSYIESIEAQEVVGGDEWEVIGFAEPGAFKGLNEFVGNETRGRGRV 331
Query: 377 ELLNL 381
E+L++
Sbjct: 332 EVLDM 336
>gi|449296195|gb|EMC92215.1| hypothetical protein BAUCODRAFT_126209 [Baudoinia compniacensis
UAMH 10762]
Length = 337
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 100/186 (53%), Gaps = 46/186 (24%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P+NQIR+TNV++VR+KK KRFEIACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIRLTNVSLVRLKKGKKRFEIACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
SKGQ A EDLKKAF +T RE
Sbjct: 64 SKGQVAPNEDLKKAF-------PGMT--RE------------------------------ 84
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIE 273
E+ IL KGE+Q+ +KER +++E +++ IV+ + ++ +KR +T MIE
Sbjct: 85 -------EVVLEILRKGEIQVGEKERGAELERLQREVVEIVAGRVVDPGSKRVYTTGMIE 137
Query: 274 AGLKQI 279
L+Q+
Sbjct: 138 KALEQL 143
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/90 (57%), Positives = 63/90 (70%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P+NQIR+TNV++VR+KK KRFEIACYKN V S+R E D+D VLQ VF NV
Sbjct: 4 AQINQPSNQIRLTNVSLVRLKKGKKRFEIACYKNTVTSFRAGNETDLDNVLQIPNVFLNV 63
Query: 62 SKGQAANKEDLKKAFNTEDQTEICKLILMK 91
SKGQ A EDLKKAF + E+ IL K
Sbjct: 64 SKGQVAPNEDLKKAFPGMTREEVVLEILRK 93
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 282 SVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVK------------DVKKL 327
V+ K++K QALE + L Q + + RA+MR+R+ V D
Sbjct: 208 GVSTTKSAKSQALEAMKALIAHQPIPVARARMRLRITCPTSVAKQMVKVQQKAANDEDGD 267
Query: 328 KEKLVKCAT---------SVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLEL 378
KE+ VK VE+++ +G ++ ++PG ++ + E V T+T+G+ E+
Sbjct: 268 KEEPVKATVKDTILGYVEQVESQDTAGDEWEVVGFVEPGSFKPLSEFVSTQTKGRARAEV 327
Query: 379 LNLKEVTEGE 388
L++ EG+
Sbjct: 328 LDMAVTHEGD 337
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 370 TRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLK 429
TR + LE+L E+ GE+ER +++E +++ IV+ + ++ +KR +T MIE L+
Sbjct: 82 TREEVVLEILRKGEIQVGEKERGAELERLQREVVEIVAGRVVDPGSKRVYTTGMIEKALE 141
Query: 430 QI 431
Q+
Sbjct: 142 QL 143
>gi|123315796|ref|XP_001292200.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121867395|gb|EAX79270.1| Uncharacterized protein family UPF0023 containing protein
[Trichomonas vaginalis G3]
Length = 144
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 46/190 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGL---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDIDEV+Q+H++F+NV +G A + ++ +
Sbjct: 45 ------------------------------EKDIDEVVQSHSIFSNVDRGMLAKQSEVLE 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+D + +IL +G+L +++KER IEN KDIA+IV+ +C+N T+RP T S +
Sbjct: 75 TLEVDDMEKALHIILDQGKLTLAEKERKLVIENLTKDIASIVASQCVNVNTQRPLTPSTV 134
Query: 273 EAGLKQIHFS 282
E +K+I FS
Sbjct: 135 ERAMKEIGFS 144
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 61/89 (68%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M+ I P Q ++NV+IV++KK GK+FEIA NKV SWRN +EKDIDEV+Q+H++F+N
Sbjct: 1 MADIIIPVGQKLLSNVSIVKLKKNGKQFEIAVTPNKVTSWRNGLEKDIDEVVQSHSIFSN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLIL 89
V +G A + ++ + +D + +IL
Sbjct: 61 VDRGMLAKQSEVLETLEVDDMEKALHIIL 89
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 434
+L+ ++T E+ER IEN KDIA+IV+ +C+N T+RP T S +E +K+I FS
Sbjct: 88 ILDQGKLTLAEKERKLVIENLTKDIASIVASQCVNVNTQRPLTPSTVERAMKEIGFS 144
>gi|346971141|gb|EGY14593.1| shwachman-Bodian-Diamond syndrome protein [Verticillium dahliae
VdLs.17]
Length = 305
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 110/331 (33%)
Query: 115 KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNMLN 174
K KRFEIACYKNKV+ +R+ IE
Sbjct: 15 KGKKRFEIACYKNKVLEYRSGIET------------------------------------ 38
Query: 175 ISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKL-ILMKGELQ 233
D+D VLQ +VF NVSKGQ A KEDL+KAF T+ L IL KGELQ
Sbjct: 39 ----------DLDNVLQIPSVFLNVSKGQTAPKEDLEKAFGKGKSTDDVVLEILKKGELQ 88
Query: 234 ISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGL----------------- 276
+ +KER++Q+E ++ IV + ++ TKR +T MIE L
Sbjct: 89 VGEKERAAQLERVQNEVLGIVCSRLVDPRTKRVYTRGMIEKALDMLSSAAHEGQQQQQAG 148
Query: 277 -------------------------KQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERA 309
+ + V K++K QALE + L Q + ++RA
Sbjct: 149 SKTASGTGTPSGNGGDEEGGAKPRAQHVWTGVTTTKSAKSQALEAMKALIAAQPIPVQRA 208
Query: 310 QMRVRVEVSA-----GVKDVKK--------------LKEKLVKCATSVENEEWSGGGLLL 350
+MR+RV + GVK K+ +K++++ VE+++ G +
Sbjct: 209 RMRLRVTCATSVLKQGVKAAKEEGVGEDGAKAAPGTVKDRILGYFEQVESQDVVGSEWEV 268
Query: 351 ICLIDPGKYREIDELVRTETRGQGTLELLNL 381
++PG ++ + + + ETRGQG +E+L++
Sbjct: 269 SGFVEPGAFKGLGDFIGNETRGQGRVEVLDM 299
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 49/69 (71%)
Query: 23 KAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQT 82
K KRFEIACYKNKV+ +R+ IE D+D VLQ +VF NVSKGQ A KEDL+KAF T
Sbjct: 15 KGKKRFEIACYKNKVLEYRSGIETDLDNVLQIPSVFLNVSKGQTAPKEDLEKAFGKGKST 74
Query: 83 EICKLILMK 91
+ L ++K
Sbjct: 75 DDVVLEILK 83
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 357 GKYREIDELVRTETRGQGTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETK 416
GK + D++V LE+L E+ GE+ER++Q+E ++ IV + ++ TK
Sbjct: 69 GKGKSTDDVV---------LEILKKGELQVGEKERAAQLERVQNEVLGIVCSRLVDPRTK 119
Query: 417 RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEEDKTSGIYSS 457
R +T MIE L + + + + +Q + +G S
Sbjct: 120 RVYTRGMIEKALDMLSSAAHEGQQQQQAGSKTASGTGTPSG 160
>gi|68009944|ref|XP_670548.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56485909|emb|CAI03682.1| hypothetical protein PB301290.00.0 [Plasmodium berghei]
Length = 139
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 94/180 (52%), Gaps = 48/180 (26%)
Query: 101 NQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAAN 160
NQ++ TNVAIV+ K G RFEIACYKNK+I W+N E +ID VLQ+H +FTN+SKG+ A
Sbjct: 8 NQVKFTNVAIVKYKHKGTRFEIACYKNKIIDWKNGNELNIDNVLQSHLIFTNISKGEIAK 67
Query: 161 KEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQT 220
K L F N++D
Sbjct: 68 KSQLNSCF----------------------------------------------NSDDNY 81
Query: 221 EICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIH 280
EICK IL KG LQIS++ER+ E +KDI ++ E +N +T P + +MIE+ KQI+
Sbjct: 82 EICKTILEKGTLQISNRERAILKEKIYKDIIEMLHEMSVNPQTGYPLSTNMIES--KQIN 139
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 63/88 (71%)
Query: 9 NQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAAN 68
NQ++ TNVAIV+ K G RFEIACYKNK+I W+N E +ID VLQ+H +FTN+SKG+ A
Sbjct: 8 NQVKFTNVAIVKYKHKGTRFEIACYKNKIIDWKNGNELNIDNVLQSHLIFTNISKGEIAK 67
Query: 69 KEDLKKAFNTEDQTEICKLILMKDMSKI 96
K L FN++D EICK IL K +I
Sbjct: 68 KSQLNSCFNSDDNYEICKTILEKGTLQI 95
>gi|317030645|ref|XP_001392988.2| hypothetical protein ANI_1_1210074 [Aspergillus niger CBS 513.88]
Length = 343
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 116/253 (45%), Gaps = 78/253 (30%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF + DE+ Q
Sbjct: 63 AQTAPSAELTKAFGADT------------PADEIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKA 137
Query: 276 L-------------------------------KQIHFSVNVNKNSKQQALEVIPTL--KQ 302
L K + V NK++K QALE + L Q
Sbjct: 138 LDQLSSASGQQQSQTSGNGETNGDDSEESRPRKPLWTGVTANKSAKSQALEAMKALIAWQ 197
Query: 303 CMSIERAQMRVRV 315
+ + RA+MR+RV
Sbjct: 198 PIPVMRARMRLRV 210
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT-EICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 63 AQTAPSAELTKAFGADTPADEIRQEILRK 91
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 318 SAGVKDVKKLKEKLVKCATSVENEEWSGGGLL-LICLIDPGKYREIDELVRTETRGQGTL 376
SA K +K+K++ S+E +E GG +I +PG ++ ++E V ETRG+G +
Sbjct: 273 SAPAKGPSNVKDKILSYIESIEAQEVVGGDEWEIIGFAEPGAFKGLNEFVGNETRGRGRV 332
Query: 377 ELLNL 381
E+L++
Sbjct: 333 EVLDM 337
>gi|169784890|ref|XP_001826906.1| hypothetical protein AOR_1_544034 [Aspergillus oryzae RIB40]
gi|238507884|ref|XP_002385143.1| UPF0023 family protein [Aspergillus flavus NRRL3357]
gi|83775653|dbj|BAE65773.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220688662|gb|EED45014.1| UPF0023 family protein [Aspergillus flavus NRRL3357]
gi|391864341|gb|EIT73637.1| putative exosome subunit [Aspergillus oryzae 3.042]
Length = 343
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 117/257 (45%), Gaps = 82/257 (31%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 IMQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A ++ KAF N DE+ Q
Sbjct: 63 AQTAPSAEIAKAFGANT------------PADEIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKA 137
Query: 276 LKQIHFS-----------------------------------VNVNKNSKQQALEVIPTL 300
L Q+ + V NK++K QALE + L
Sbjct: 138 LDQLSSASGQMQQAQSQNNNGEASGAGDESRPAQPRKPLWTGVTPNKSAKIQALEAMKAL 197
Query: 301 --KQCMSIERAQMRVRV 315
Q + + RA+MR+RV
Sbjct: 198 IAWQPIPVMRARMRLRV 214
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 IMQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT-EICKLILMK 91
Q A ++ KAF EI + IL K
Sbjct: 63 AQTAPSAEIAKAFGANTPADEIRQEILRK 91
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 37/55 (67%)
Query: 327 LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+K+K++ SVE++E +G ++ +PG ++ ++E V +TRG+G +E+L++
Sbjct: 283 VKDKILSFIESVESQEIAGDEWEVVGFAEPGAFKGLNEFVGNDTRGRGRVEVLDM 337
>gi|115390146|ref|XP_001212578.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194974|gb|EAU36674.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 336
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 116/249 (46%), Gaps = 74/249 (29%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF + D++ Q
Sbjct: 63 AQTAPSAELAKAFGADT------------PADDIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER IE K++ IVS + ++ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEIIERVEKEVLDIVSGRLVDPTTKRVYTPGMISKA 137
Query: 276 LKQIHFS---------------------------VNVNKNSKQQALEVIPTL--KQCMSI 306
L Q+ + V K++K QAL+ + L Q + +
Sbjct: 138 LDQLSSASGQMQQQGETGSGAEDGSRPRKPLWTGVTATKSAKSQALDAMKALIAWQPIPV 197
Query: 307 ERAQMRVRV 315
RA+MR+RV
Sbjct: 198 MRARMRLRV 206
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 56/76 (73%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTE 79
Q A +L KAF +
Sbjct: 63 AQTAPSAELAKAFGAD 78
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 316 EVSAGVKDVKK---LKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRG 372
E SAG K +K+K++ S E++E G ++ +PG ++ ++E V ETRG
Sbjct: 262 ESSAGPAPPKAPGTVKDKILSYIESAESQEVMGDEWEVVGFAEPGAFKGLNEFVGNETRG 321
Query: 373 QGTLELLNL 381
+G +E+L++
Sbjct: 322 RGRVEVLDM 330
>gi|1638838|emb|CAA67982.1| hypothetical protein [Mus musculus]
Length = 154
Score = 119 bits (298), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/86 (67%), Positives = 67/86 (77%), Gaps = 1/86 (1%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTHTVF NVSK
Sbjct: 49 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHTVFGNVSK 108
Query: 156 GQAAN-KEDLKKAFNTNMLNISSLTS 180
GQ +EDL AF + L S
Sbjct: 109 GQGCQRREDLINAFGERRTRLKILQS 134
Score = 119 bits (297), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/74 (75%), Positives = 64/74 (86%), Gaps = 1/74 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTPTNQIR+TNVA+VRMK+ GKRFEIACYKNKV+ WR+ +EKD+DEVLQTHTVF NVSK
Sbjct: 49 IFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHTVFGNVSK 108
Query: 64 GQAAN-KEDLKKAF 76
GQ +EDL AF
Sbjct: 109 GQGCQRREDLINAF 122
>gi|67538546|ref|XP_663047.1| hypothetical protein AN5443.2 [Aspergillus nidulans FGSC A4]
gi|40743413|gb|EAA62603.1| hypothetical protein AN5443.2 [Aspergillus nidulans FGSC A4]
gi|259485109|tpe|CBF81901.1| TPA: UPF0023 family protein (AFU_orthologue; AFUA_6G13530)
[Aspergillus nidulans FGSC A4]
Length = 343
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/258 (31%), Positives = 115/258 (44%), Gaps = 83/258 (32%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF + DE+ Q
Sbjct: 63 AQTAPAAELIKAFGPDT------------PADEIRQE----------------------- 87
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER E K++ IVS + I+ TKR +T MI
Sbjct: 88 ----------ILRKGEVQVGERERKEIAERIEKEVLDIVSGRLIDPTTKRVYTPGMISKA 137
Query: 276 LKQIHF------------------------------------SVNVNKNSKQQALEVIPT 299
L Q+ VN NK++K ALE +
Sbjct: 138 LDQLTAASGQMQQQQSAAQTGENGAGDEDAAAPRQQKKPLWTGVNPNKSAKSLALEAMKA 197
Query: 300 L--KQCMSIERAQMRVRV 315
L Q + + RA+MR+RV
Sbjct: 198 LIAWQPIPVMRARMRLRV 215
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ EKD+D VLQ T+F +VSK
Sbjct: 3 INQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAEKDLDNVLQVPTIFLSVSK 62
Query: 64 GQAANKEDLKKAFNTEDQT-EICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 63 AQTAPAAELIKAFGPDTPADEIRQEILRK 91
>gi|119196883|ref|XP_001249045.1| hypothetical protein CIMG_02816 [Coccidioides immitis RS]
gi|392861772|gb|EAS31958.2| SBDS family rRNA metabolism protein [Coccidioides immitis RS]
Length = 350
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF TN A +ED
Sbjct: 68 APTAELAKAFGTN---------------------------------AKRED--------- 85
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I + IL KGE+Q+ ++ER +E +++ IVS + ++ +KR +T MI L Q
Sbjct: 86 ---IVQEILRKGEVQVGERERKELLERVEREVLEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTEDQTE-ICKLILMK 91
A +L KAF T + E I + IL K
Sbjct: 68 APTAELAKAFGTNAKREDIVQEILRK 93
>gi|239610309|gb|EEQ87296.1| UPF0023 family protein [Ajellomyces dermatitidis ER-3]
gi|327349266|gb|EGE78123.1| hypothetical protein BDDG_01060 [Ajellomyces dermatitidis ATCC
18188]
Length = 356
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQIR TNV+IVR++K KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIRFTNVSIVRLRKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF T N DE++Q
Sbjct: 68 APAAELTKAFGTKASN------------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDVLERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQIR TNV+IVR++K KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIRFTNVSIVRLRKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF T+ EI + IL K
Sbjct: 68 APAAELTKAFGTKASNDEIIQEILRK 93
>gi|261188779|ref|XP_002620803.1| UPF0023 family protein [Ajellomyces dermatitidis SLH14081]
gi|239592035|gb|EEQ74616.1| UPF0023 family protein [Ajellomyces dermatitidis SLH14081]
Length = 356
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 93/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQIR TNV+IVR++K KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIRFTNVSIVRLRKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF T N DE++Q
Sbjct: 68 APAAELTKAFGTKASN------------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDVLERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQIR TNV+IVR++K KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIRFTNVSIVRLRKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF T+ EI + IL K
Sbjct: 68 APAAELTKAFGTKASNDEIIQEILRK 93
>gi|320032726|gb|EFW14677.1| UPF0023 family protein [Coccidioides posadasii str. Silveira]
Length = 350
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 45/197 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +N A +ED
Sbjct: 68 APTAELAKAFGSN---------------------------------AKRED--------- 85
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I + IL KGE+Q+ ++ER +E +++ IVS + ++ +KR +T MI L Q
Sbjct: 86 ---IVQEILRKGEVQVGERERKELLERVEREVLEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 IHFSVNVNKNSKQQALE 295
+ + + +E
Sbjct: 143 LSAASGQQGGKPKSGVE 159
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTEDQTE-ICKLILMK 91
A +L KAF + + E I + IL K
Sbjct: 68 APTAELAKAFGSNAKREDIVQEILRK 93
>gi|303322132|ref|XP_003071059.1| hypothetical protein CPC735_036200 [Coccidioides posadasii C735
delta SOWgp]
gi|240110758|gb|EER28914.1| hypothetical protein CPC735_036200 [Coccidioides posadasii C735
delta SOWgp]
Length = 350
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 45/197 (22%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +N A +ED
Sbjct: 68 APTAELAKAFGSN---------------------------------AKRED--------- 85
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
I + IL KGE+Q+ ++ER +E +++ IVS + ++ +KR +T MI L Q
Sbjct: 86 ---IVQEILRKGEVQVGERERKELLERVEREVLEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 IHFSVNVNKNSKQQALE 295
+ + + +E
Sbjct: 143 LSAASGQQGGKPKSGVE 159
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGAETDLDNVLQVPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTEDQTE-ICKLILMK 91
A +L KAF + + E I + IL K
Sbjct: 68 APTAELAKAFGSNAKREDIVQEILRK 93
>gi|384490747|gb|EIE81969.1| hypothetical protein RO3G_06674 [Rhizopus delemar RA 99-880]
Length = 122
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 87/121 (71%), Gaps = 3/121 (2%)
Query: 271 MIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLK 328
MIE ++ +H SVN +++K QAL+VI L KQ + I+RAQMR+R+ + K+ KKL+
Sbjct: 1 MIEKAMQDLHLSVNPKRSTKSQALDVIKQLQEKQLLPIQRAQMRIRITLQQS-KESKKLR 59
Query: 329 EKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGE 388
E ++ TS+E+E+ G + LI L+DPGKYR I++L++ E++G+G LE++NL+E EG+
Sbjct: 60 ETILPLLTSIEDEDSGSGEIELIALVDPGKYRTINDLLQNESKGKGQLEIMNLREKEEGD 119
Query: 389 E 389
E
Sbjct: 120 E 120
>gi|226294816|gb|EEH50236.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 375
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 45/184 (24%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF N DE++Q
Sbjct: 65 AQTAPTAELSKAFGPKTSN------------DEIIQE----------------------- 89
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI
Sbjct: 90 ----------ILRKGEVQVGERERKDILERVEKEVLEIVSARLVDPVSKRVYTTGMISKA 139
Query: 276 LKQI 279
L Q+
Sbjct: 140 LDQL 143
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 64 GQAANKEDLKKAFNTE-DQTEICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 65 AQTAPTAELSKAFGPKTSNDEIIQEILRK 93
>gi|295668835|ref|XP_002794966.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285659|gb|EEH41225.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 372
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 45/184 (24%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF N DE++Q
Sbjct: 65 AQTAPAAELSKAFGPKTSN------------DEIIQE----------------------- 89
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI
Sbjct: 90 ----------ILRKGEVQVGERERKDILERVEKEVLEIVSARLVDPVSKRVYTTGMISKA 139
Query: 276 LKQI 279
L Q+
Sbjct: 140 LDQL 143
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 64 GQAANKEDLKKAFNTE-DQTEICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 65 AQTAPAAELSKAFGPKTSNDEIIQEILRK 93
>gi|225678477|gb|EEH16761.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 377
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 93/184 (50%), Gaps = 45/184 (24%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
Q A +L KAF N DE++Q
Sbjct: 65 AQTAPTAELSKAFGPKTSN------------DEIIQE----------------------- 89
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI
Sbjct: 90 ----------ILRKGEVQVGERERKDILERVEKEVLEIVSARLVDPVSKRVYTTGMISKA 139
Query: 276 LKQI 279
L Q+
Sbjct: 140 LDQL 143
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 61/89 (68%), Gaps = 1/89 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
I P+NQI+ TNV++VR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK
Sbjct: 5 IIQPSNQIKFTNVSVVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSK 64
Query: 64 GQAANKEDLKKAFNTE-DQTEICKLILMK 91
Q A +L KAF + EI + IL K
Sbjct: 65 AQTAPTAELSKAFGPKTSNDEIIQEILRK 93
>gi|426356455|ref|XP_004045585.1| PREDICTED: ribosome maturation protein SBDS-like [Gorilla gorilla
gorilla]
Length = 162
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 72/91 (79%), Gaps = 2/91 (2%)
Query: 224 KLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 283
K IL KGE+Q+SDK+ +Q+E F+DIATIV++KC+ ETKRP+TV +IE +K IH+SV
Sbjct: 24 KSILTKGEVQVSDKD--TQLEQMFRDIATIVADKCVTPETKRPYTVILIERAMKDIHYSV 81
Query: 284 NVNKNSKQQALEVIPTLKQCMSIERAQMRVR 314
N+++KQQALEVI LK+ M IERA MR+R
Sbjct: 82 KTNRSTKQQALEVIKQLKEKMKIERAHMRLR 112
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 384 VTEGE---EERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKN 440
+T+GE ++ +Q+E F+DIATIV++KC+ ETKRP+TV +IE +K IH+SV N++
Sbjct: 27 LTKGEVQVSDKDTQLEQMFRDIATIVADKCVTPETKRPYTVILIERAMKDIHYSVKTNRS 86
Query: 441 SKQQALE 447
+KQQALE
Sbjct: 87 TKQQALE 93
>gi|315047905|ref|XP_003173327.1| hypothetical protein MGYG_03499 [Arthroderma gypseum CBS 118893]
gi|311341294|gb|EFR00497.1| hypothetical protein MGYG_03499 [Arthroderma gypseum CBS 118893]
Length = 357
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 45/187 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VS+G A +L K+F K
Sbjct: 61 VSRGHTAPTAELAKSFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+ TED + + IL KGE+Q+ +KER ++ K++ IVS + ++ +KR +T MI
Sbjct: 79 DYKTED---VIQEILRKGEVQVGEKERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMI 135
Query: 273 EAGLKQI 279
L Q+
Sbjct: 136 GKALDQL 142
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
VS+G A +L K+F + +TE
Sbjct: 61 VSRGHTAPTAELAKSFGKDYKTE 83
>gi|326485537|gb|EGE09547.1| emp24/gp25L/p24 family protein [Trichophyton equinum CBS 127.97]
Length = 394
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 95/187 (50%), Gaps = 45/187 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VS+G A +L K+F K
Sbjct: 61 VSRGHTAPTAELAKSFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+ TED + + IL KGE+Q+ +KER ++ K++ IVS + ++ +KR +T MI
Sbjct: 79 DYKTED---VIQEILRKGEVQVGEKERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMI 135
Query: 273 EAGLKQI 279
L Q+
Sbjct: 136 GKALDQL 142
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
VS+G A +L K+F + +TE
Sbjct: 61 VSRGHTAPTAELAKSFGKDYKTE 83
>gi|323303971|gb|EGA57751.1| Sdo1p [Saccharomyces cerevisiae FostersB]
Length = 193
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 19/193 (9%)
Query: 198 NVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEK 257
NVSKG ANKEDL+K F T + ++ + I+ KGE+Q+S+KER + ++ TIVS K
Sbjct: 2 NVSKGLVANKEDLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAK 61
Query: 258 CINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRV 315
CIN +K+ + +MI L+++ FS +NK +K QALE I L KQ + I RA+M+V+V
Sbjct: 62 CINPVSKKRYPPTMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKV 121
Query: 316 EVSAGVKDVKKLKEKLVKC-------ATSVENEEWSGGGLLLICLIDPGKYREIDELVRT 368
+S + +L EK+ K +T E + W+ G LIDP YR++ T
Sbjct: 122 AISEPSRQ-PELIEKISKLIASSPGESTKPELDPWTCTG-----LIDPVNYRDL----MT 171
Query: 369 ETRGQGTLELLNL 381
+GT+++L++
Sbjct: 172 LCDKKGTVQVLDM 184
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%)
Query: 377 ELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 436
E+++ E+ E+ER + ++ TIVS KCIN +K+ + +MI L+++ FS
Sbjct: 29 EIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPV 88
Query: 437 VNKNSKQQALE 447
+NK +K QALE
Sbjct: 89 INKPAKLQALE 99
>gi|225555620|gb|EEH03911.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 364
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +SS DE++Q
Sbjct: 68 APAAELAKAFGP---KVSS---------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDILERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 68 APAAELAKAFGPKVSSDEIIQEILRK 93
>gi|240276440|gb|EER39952.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 363
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +SS DE++Q
Sbjct: 68 APAAELAKAFGP---KVSS---------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDILERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 68 APAAELAKAFGPKVSSDEIIQEILRK 93
>gi|325091937|gb|EGC45247.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 364
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 94/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +SS DE++Q
Sbjct: 68 APAAELAKAFGP---KVSS---------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDILERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGTETDLDNVLQIPTVFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 68 APAAELAKAFGPKVSSDEIIQEILRK 93
>gi|378729986|gb|EHY56445.1| hypothetical protein HMPREF1120_04527 [Exophiala dermatitidis
NIH/UT8656]
Length = 372
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 12/184 (6%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P NQI++TNV++VR KK KRFE+ACYKNK++ +R E D+D VLQ T+F N
Sbjct: 1 MPMIQQPANQIKLTNVSLVRYKKGKKRFELACYKNKLLEYREGTETDLDNVLQVPTIFLN 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
SKG+ A +L KA+ + + E+ A+++ +++K
Sbjct: 61 ASKGETAPNSELLKAW--------PMPTQSEESSHGGKSGGKGGKKGKGKAASDETNVEK 112
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
++ + I + IL KGE+Q++ ER ++ ++I V+++ ++ +TKR +T MI
Sbjct: 113 SW----KDSIIEEILKKGEIQVNANERKELLDRMEREIVEEVAQRVVDPQTKRVYTPGMI 168
Query: 273 EAGL 276
+ GL
Sbjct: 169 KKGL 172
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P NQI++TNV++VR KK KRFE+ACYKNK++ +R E D+D VLQ T+F N
Sbjct: 1 MPMIQQPANQIKLTNVSLVRYKKGKKRFELACYKNKLLEYREGTETDLDNVLQVPTIFLN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
SKG+ A +L KA+ Q+E
Sbjct: 61 ASKGETAPNSELLKAWPMPTQSE 83
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Query: 282 SVNVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEV--------------------SA 319
V K+ KQQALE I L Q + + RA+MR+R+ +
Sbjct: 244 GVVTTKSVKQQALEAIRALIAWQPIPVMRARMRLRITCPTSIAKQAPKSKAASTDDGGAE 303
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
G + +K++++ VE+++ G ++ ++PG ++ + E ET+G+G LE+L
Sbjct: 304 GEQGKGTVKDRILSFVEQVESQDVQGDEWEVVGFVEPGAFKALGEFCSAETKGRGRLEVL 363
Query: 380 NL 381
++
Sbjct: 364 DM 365
>gi|253743940|gb|EET00214.1| Shwachman-Bodian-Diamond syndrome protein-like protein [Giardia
intestinalis ATCC 50581]
Length = 254
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 121/245 (49%), Gaps = 52/245 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS I P Q +TNVAIV+ +RFE+ACY +KV S+RN +
Sbjct: 1 MSHIVQPVTQKWLTNVAIVQYIVNDQRFEVACYSSKVASYRNGV---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDI+EV+Q H +F++ KG+ + E L+K
Sbjct: 45 ------------------------------EKDINEVIQAHAIFSDAVKGELQSAEALQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T++ IC I++ G +Q S+ ER+++ + +F +IA+IV+ + N+ T + ++I
Sbjct: 75 AFGTQNTLSICNQIILNGRVQFSELERTTEQDRKFTEIASIVALRLTNSVTGAAYPRALI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL 331
E+ ++ +H+ V + + QA VI L++ + ++ Q +V + V + KK +
Sbjct: 135 ESAMRNDLHYRVT-QQPASAQAAHVIRQLEEFLGVQLPQ-KVSISVELPLDHAKKC---I 189
Query: 332 VKCAT 336
CAT
Sbjct: 190 AVCAT 194
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS I P Q +TNVAIV+ +RFE+ACY +KV S+RN +EKDI+EV+Q H +F++
Sbjct: 1 MSHIVQPVTQKWLTNVAIVQYIVNDQRFEVACYSSKVASYRNGVEKDINEVIQAHAIFSD 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILM 90
KG+ + E L+KAF T++ IC I++
Sbjct: 61 AVKGELQSAEALQKAFGTQNTLSICNQIIL 90
>gi|302652154|ref|XP_003017936.1| hypothetical protein TRV_08056 [Trichophyton verrucosum HKI 0517]
gi|291181523|gb|EFE37291.1| hypothetical protein TRV_08056 [Trichophyton verrucosum HKI 0517]
Length = 363
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 45/187 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VS+G A +L K+F K
Sbjct: 61 VSRGHTAPTAELAKSFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+ ED + + IL KGE+Q+ +KER ++ K++ IVS + ++ +KR +T MI
Sbjct: 79 DYKIED---VIQEILRKGEVQVGEKERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMI 135
Query: 273 EAGLKQI 279
L Q+
Sbjct: 136 GKALDQL 142
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
VS+G A +L K+F + + E
Sbjct: 61 VSRGHTAPTAELAKSFGKDYKIE 83
>gi|327292938|ref|XP_003231166.1| hypothetical protein TERG_08256 [Trichophyton rubrum CBS 118892]
gi|326466585|gb|EGD92038.1| hypothetical protein TERG_08256 [Trichophyton rubrum CBS 118892]
Length = 361
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 45/187 (24%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VS+G A +L K+F K
Sbjct: 61 VSRGHTAPTAELAKSFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
+ ED + + IL KGE+Q+ +KER ++ K++ IVS + ++ +KR +T MI
Sbjct: 79 DYKIED---VIQEILRKGEVQVGEKERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMI 135
Query: 273 EAGLKQI 279
L Q+
Sbjct: 136 GKALDQL 142
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
VS+G A +L K+F + + E
Sbjct: 61 VSRGHTAPTAELAKSFGKDYKIE 83
>gi|154270981|ref|XP_001536344.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409567|gb|EDN05011.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 369
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 94/181 (51%), Gaps = 45/181 (24%)
Query: 99 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 158
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ T+F +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGSETDLDNVLQIPTIFLSVSKAQT 67
Query: 159 ANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 218
A +L KAF +SS DE++Q
Sbjct: 68 APAAELAKAFGP---KVSS---------DEIIQE-------------------------- 89
Query: 219 QTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQ 278
IL KGE+Q+ ++ER +E K++ IVS + ++ +KR +T MI L Q
Sbjct: 90 -------ILRKGEVQVGERERRDILERIEKEVIEIVSARLVDPVSKRVYTTGMISKALDQ 142
Query: 279 I 279
+
Sbjct: 143 L 143
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK KRFE+ACYKNK++ +R+ E D+D VLQ T+F +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKKGKKRFELACYKNKLLEYRSGSETDLDNVLQIPTIFLSVSKAQT 67
Query: 67 ANKEDLKKAFNTE-DQTEICKLILMK 91
A +L KAF + EI + IL K
Sbjct: 68 APAAELAKAFGPKVSSDEIIQEILRK 93
>gi|351703249|gb|EHB06168.1| Ribosome maturation protein SBDS [Heterocephalus glaber]
Length = 176
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/121 (47%), Positives = 86/121 (71%), Gaps = 5/121 (4%)
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
ER +Q+E F++IATIV++KC+N ETKRP+TV +I+ +K IH+SV NK++KQQALEVI
Sbjct: 55 ERHTQLEQMFRNIATIVADKCVNPETKRPYTVILIKRAMKDIHYSVKPNKSTKQQALEVI 114
Query: 298 PTLKQCMSIERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
LK+ M IER MR+R + K +K+ + ++K +ENE++S L ++CLI+P
Sbjct: 115 KQLKEKMKIERPHMRLRFILPVNEGKKLKEKLKPMIKV---IENEDYS-QQLEMVCLINP 170
Query: 357 G 357
G
Sbjct: 171 G 171
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 48/58 (82%)
Query: 390 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ER +Q+E F++IATIV++KC+N ETKRP+TV +I+ +K IH+SV NK++KQQALE
Sbjct: 55 ERHTQLEQMFRNIATIVADKCVNPETKRPYTVILIKRAMKDIHYSVKPNKSTKQQALE 112
>gi|37674384|gb|AAQ96837.1| unknown [Homo sapiens]
Length = 61
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 55/59 (93%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
IFTPTNQIR+TNVA+VRMK+A KRFEIACY+NKV+ WR+ +EKD+DEVLQTH+VF NVS
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRARKRFEIACYRNKVVGWRSGLEKDLDEVLQTHSVFVNVS 61
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 46/59 (77%), Positives = 55/59 (93%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
IFTPTNQIR+TNVA+VRMK+A KRFEIACY+NKV+ WR+ +EKD+DEVLQTH+VF NVS
Sbjct: 3 IFTPTNQIRLTNVAVVRMKRARKRFEIACYRNKVVGWRSGLEKDLDEVLQTHSVFVNVS 61
>gi|159117675|ref|XP_001709057.1| Shwachman-Bodian-Diamond syndrome protein-like protein [Giardia
lamblia ATCC 50803]
gi|157437172|gb|EDO81383.1| Shwachman-Bodian-Diamond syndrome protein-like protein [Giardia
lamblia ATCC 50803]
Length = 251
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 49/234 (20%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS I P Q TNVAIV+ +RFE+ACY +KV S+RN +
Sbjct: 1 MSYIVQPVTQKWFTNVAIVQYVVNDQRFEVACYSSKVASYRNGV---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDI+EV+Q H +F++ KG+ + E+L+K
Sbjct: 45 ------------------------------EKDINEVIQAHAIFSDAVKGELQSAENLQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T++ IC I++ G + +S+ ER+ + E +F +IA+IV+ + N T + ++I
Sbjct: 75 AFGTQNTLSICNQIILNGRVHLSELERTVEQERKFTEIASIVALRLTNPATGAAYPRTLI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVK 325
E +K +H+ V + + QA VI L++ M + Q +V + V + K
Sbjct: 135 EFAMKNDLHYRVT-QQPASAQAAHVIRQLEEFMGVHLPQ-KVNISVELPLSHAK 186
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS I P Q TNVAIV+ +RFE+ACY +KV S+RN +EKDI+EV+Q H +F++
Sbjct: 1 MSYIVQPVTQKWFTNVAIVQYVVNDQRFEVACYSSKVASYRNGVEKDINEVIQAHAIFSD 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILM 90
KG+ + E+L+KAF T++ IC I++
Sbjct: 61 AVKGELQSAENLQKAFGTQNTLSICNQIIL 90
>gi|294877674|ref|XP_002768070.1| Shwachman-Bodian-Diamond syndrome protein, putative [Perkinsus
marinus ATCC 50983]
gi|239870267|gb|EER00788.1| Shwachman-Bodian-Diamond syndrome protein, putative [Perkinsus
marinus ATCC 50983]
Length = 184
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 93/192 (48%), Gaps = 50/192 (26%)
Query: 99 PTNQIRMTNVAIVRMKKAGK----RFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 154
P Q R+TN+AIV MKK K +FEIACY NKV++ R IE
Sbjct: 5 PVGQKRLTNIAIVSMKKKCKKREYKFEIACYPNKVVNSRQGIET---------------- 48
Query: 155 KGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 214
D+DEVLQ+ V+TNVS+G A +DLK F
Sbjct: 49 ------------------------------DLDEVLQSEAVYTNVSRGDRALAKDLKACF 78
Query: 215 NTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEA 274
T DQ EICK ILM G LQI+ ER E++ ++ T ++E CI++ T P T I +
Sbjct: 79 GTTDQKEICKEILMHGTLQITGTEREFFHESRTNEVITQLAEMCIDSRTGFPLTKDQISS 138
Query: 275 GLKQIHFSVNVN 286
L+ I++ V V
Sbjct: 139 ALQDINYQVRVG 150
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 7 PTNQIRMTNVAIVRMKKAGK----RFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
P Q R+TN+AIV MKK K +FEIACY NKV++ R IE D+DEVLQ+ V+TNVS
Sbjct: 5 PVGQKRLTNIAIVSMKKKCKKREYKFEIACYPNKVVNSRQGIETDLDEVLQSEAVYTNVS 64
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
+G A +DLK F T DQ EICK ILM +I
Sbjct: 65 RGDRALAKDLKACFGTTDQKEICKEILMHGTLQI 98
>gi|326473762|gb|EGD97771.1| hypothetical protein TESG_05173 [Trichophyton tonsurans CBS 112818]
Length = 346
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 116/258 (44%), Gaps = 80/258 (31%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
VS+G A +L K+F K
Sbjct: 61 VSRGHTAPTAELAKSFG------------------------------------------K 78
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPF----- 267
+ TED + + IL KGE+Q+ +KER ++ K++ IVS + ++ +KR +
Sbjct: 79 DYKTED---VIQEILRKGEVQVGEKERRDILDRVEKEVFEIVSARLVDPVSKRVYHHRDD 135
Query: 268 ----------------------------TVSMIEAGLKQIHFSVNVNKNSKQQALEVIPT 299
T + K + V +K++K QAL+ +
Sbjct: 136 GKRDQLTQQQQQQHETAEVDGDEEIAKKTADLTLTPRKPLWTGVTTSKSAKIQALDAMKA 195
Query: 300 L--KQCMSIERAQMRVRV 315
L Q + + RA+MR+R+
Sbjct: 196 LIAWQPIPVMRARMRLRI 213
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M I P+NQI+ TNV+IVR+KK KR+E+ACYKNK++ +R+ E D+D VLQ TVF +
Sbjct: 1 MPMIMQPSNQIKFTNVSIVRLKKGKKRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLS 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
VS+G A +L K+F + +TE
Sbjct: 61 VSRGHTAPTAELAKSFGKDYKTE 83
>gi|308161217|gb|EFO63673.1| Shwachman-Bodian-Diamond syndrome like protein protein [Giardia
lamblia P15]
Length = 251
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 48/219 (21%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
MS I P Q TNVAIV+ ++FE+ACY +KV S+RN I
Sbjct: 1 MSHIVQPVTQKWFTNVAIVQHVVNDQKFEVACYSSKVASYRNGI---------------- 44
Query: 153 VSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKK 212
EKDI+EV+Q H +F++ KG+ + E L+K
Sbjct: 45 ------------------------------EKDINEVIQAHAIFSDAVKGELQSAEALQK 74
Query: 213 AFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
AF T++ IC I++ G +Q+S+ ER+ + E +F +IA+IV+ + N T + ++I
Sbjct: 75 AFGTQNTLSICSQIILNGRVQLSELERTVEQERKFTEIASIVALRLTNPATGAAYPRALI 134
Query: 273 EAGLK-QIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQ 310
E +K +H+ V + + QA VI L++ M + Q
Sbjct: 135 EFTMKNDLHYRVT-QQPASAQAAHVIRQLEEFMGVHLPQ 172
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
MS I P Q TNVAIV+ ++FE+ACY +KV S+RN IEKDI+EV+Q H +F++
Sbjct: 1 MSHIVQPVTQKWFTNVAIVQHVVNDQKFEVACYSSKVASYRNGIEKDINEVIQAHAIFSD 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTEICKLILM 90
KG+ + E L+KAF T++ IC I++
Sbjct: 61 AVKGELQSAEALQKAFGTQNTLSICSQIIL 90
>gi|68070967|ref|XP_677397.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497499|emb|CAH93623.1| hypothetical protein PB000076.00.0 [Plasmodium berghei]
Length = 83
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%)
Query: 1 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 60
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N E +ID VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGNELNIDNVLQSHLIFTN 60
Query: 61 VSKGQAANKEDLKKAFNTEDQTE 83
+SKG+ A K L FN++D E
Sbjct: 61 ISKGEIAKKSQLNSCFNSDDNYE 83
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 93 MSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTN 152
M +F P NQ++ TNVAIV+ K G +FEIACYKNK+I W+N E +ID VLQ+H +FTN
Sbjct: 1 MGALFQPINQVKFTNVAIVKYKHKGNKFEIACYKNKIIDWKNGNELNIDNVLQSHLIFTN 60
Query: 153 VSKGQAANKEDLKKAFNTN 171
+SKG+ A K L FN++
Sbjct: 61 ISKGEIAKKSQLNSCFNSD 79
>gi|167388429|ref|XP_001738563.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898164|gb|EDR25108.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 245
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 56/266 (21%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
+TN+++VR+ K K+FEIACY N V +WR +E ++
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLN----------------------- 47
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
EVLQ ++ +V KG+ A K+DLK+AF ++ +I
Sbjct: 48 -----------------------EVLQLTRIYQSVEKGEVAKKKDLKEAFGKTNEDDIIL 84
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL GE+Q +KER Q+++ KD+ ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 85 EILKNGEIQKGEKERKVQLDSLNKDVMILLTQKLIHKETKKPISMKMAEKLIKDLKYNIV 144
Query: 285 VNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENE- 341
+K +KQQ+L ++ LK+ + IER M + V+++ ++D E L ++N+
Sbjct: 145 TSKTAKQQSLLILKLLKKHPEIPIERMPMVISVDITKDLED-----EVLNLIKDQIKNQS 199
Query: 342 --EWSGGGLLLICLIDPGKYREIDEL 365
E S + +IDP + E+ L
Sbjct: 200 IKESSETRIKYEFIIDPSAFHELQTL 225
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
+TN+++VR+ K K+FEIACY N V +WR +E ++EVLQ ++ +V KG+ A K+DL
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLNEVLQLTRIYQSVEKGEVAKKKDL 70
Query: 73 KKAFNTEDQTEICKLIL 89
K+AF ++ +I IL
Sbjct: 71 KEAFGKTNEDDIILEIL 87
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 48/70 (68%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +GE+ER Q+++ KD+ ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 84 LEILKNGEIQKGEKERKVQLDSLNKDVMILLTQKLIHKETKKPISMKMAEKLIKDLKYNI 143
Query: 436 NVNKNSKQQA 445
+K +KQQ+
Sbjct: 144 VTSKTAKQQS 153
>gi|67470032|ref|XP_650987.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56467664|gb|EAL45601.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
Length = 245
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 48/221 (21%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
+TN+++VR+ K K+FEIACY N V +WR +E ++
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLN----------------------- 47
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
EVLQ ++ +V KG+ A K+DLK+AF ++ EI
Sbjct: 48 -----------------------EVLQLTRIYQSVEKGEVAKKKDLKEAFGKTNEDEIIL 84
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL GE+Q +KER Q+++ KDI ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 85 EILKNGEIQKGEKERKVQLDSLNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNIV 144
Query: 285 VNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKD 323
+K +KQQ+L ++ LK+ + IER M + V+++ +++
Sbjct: 145 TSKTAKQQSLLILKLLKKHPEIPIERMPMVISVDITKDLEE 185
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
+TN+++VR+ K K+FEIACY N V +WR +E ++EVLQ ++ +V KG+ A K+DL
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLNEVLQLTRIYQSVEKGEVAKKKDL 70
Query: 73 KKAFNTEDQTEICKLIL 89
K+AF ++ EI IL
Sbjct: 71 KEAFGKTNEDEIILEIL 87
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +GE+ER Q+++ KDI ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 84 LEILKNGEIQKGEKERKVQLDSLNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNI 143
Query: 436 NVNKNSKQQA 445
+K +KQQ+
Sbjct: 144 VTSKTAKQQS 153
>gi|449701943|gb|EMD42664.1| rRNA metabolism protein SBDS family protein [Entamoeba histolytica
KU27]
Length = 245
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 48/221 (21%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
+TN+++VR+ K K+FEIACY N V +WR +E ++
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLN----------------------- 47
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
EVLQ ++ +V KG+ A K+DLK+AF ++ EI
Sbjct: 48 -----------------------EVLQLTRIYQSVEKGEVAKKKDLKEAFGKTNEDEIIL 84
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL GE+Q +KER Q+++ KDI ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 85 EILKNGEIQKGEKERKVQLDSLNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNIV 144
Query: 285 VNKNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKD 323
+K +KQQ+L ++ LK+ + IER M + V+++ +++
Sbjct: 145 TSKTAKQQSLLILKLLKKHPEIPIERMPMVISVDITKDLEE 185
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
+TN+++VR+ K K+FEIACY N V +WR +E ++EVLQ ++ +V KG+ A K+DL
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGVEMPLNEVLQLTRIYQSVEKGEVAKKKDL 70
Query: 73 KKAFNTEDQTEICKLIL 89
K+AF ++ EI IL
Sbjct: 71 KEAFGKTNEDEIILEIL 87
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +GE+ER Q+++ KDI ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 84 LEILKNGEIQKGEKERKVQLDSLNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNI 143
Query: 436 NVNKNSKQQA 445
+K +KQQ+
Sbjct: 144 VTSKTAKQQS 153
>gi|221108523|ref|XP_002167398.1| PREDICTED: ribosome maturation protein SBDS-like, partial [Hydra
magnipapillata]
Length = 98
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 73/98 (74%), Gaps = 4/98 (4%)
Query: 293 ALEVIPTLKQCMSIERAQMRVRVEVSAGVKD-VKKLKEKLVKCATSVENEEWSGGGLLLI 351
ALEVI LK ++IERA+MR+R+ + KD KK +EK+V +++E EEW G L +
Sbjct: 1 ALEVIKLLKASIAIERAEMRIRIILP---KDCAKKTREKVVTLVSNIEKEEWLLGQLDME 57
Query: 352 CLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
CLIDPG YR I+E++ +E++G+G +ELL+LKE+TEGEE
Sbjct: 58 CLIDPGVYRVINEMISSESKGKGNVELLSLKEITEGEE 95
>gi|444709704|gb|ELW50705.1| Peptidyl-prolyl cis-trans isomerase CWC27 like protein [Tupaia
chinensis]
Length = 661
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
Query: 6 TPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 65
+PT+QI +TNVA+V+MK+ GK E+ CYKNKV+ WR+ +EKD DEVLQTH V N SKGQ
Sbjct: 345 SPTDQILLTNVAVVQMKRGGKYLEMTCYKNKVVGWRSAVEKDPDEVLQTHCV--NASKGQ 402
Query: 66 AANKEDL 72
A KEDL
Sbjct: 403 VARKEDL 409
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%), Gaps = 2/67 (2%)
Query: 98 TPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 157
+PT+QI +TNVA+V+MK+ GK E+ CYKNKV+ WR+ +EKD DEVLQTH V N SKGQ
Sbjct: 345 SPTDQILLTNVAVVQMKRGGKYLEMTCYKNKVVGWRSAVEKDPDEVLQTHCV--NASKGQ 402
Query: 158 AANKEDL 164
A KEDL
Sbjct: 403 VARKEDL 409
>gi|374628425|ref|ZP_09700810.1| Shwachman-Bodian-Diamond syndrome protein [Methanoplanus limicola
DSM 2279]
gi|373906538|gb|EHQ34642.1| Shwachman-Bodian-Diamond syndrome protein [Methanoplanus limicola
DSM 2279]
Length = 233
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI++ + +F N SK + A++E+LKK F++ D + + I+ KGE+ ++ ++R +E
Sbjct: 38 DIEDAVAALFIFENSSKAEKASEENLKKVFDSTDFETVARRIIHKGEIHLTAEQRKQMVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
++ K I +S IN + K P IE +++ SV+ K+ +Q V+ L+ +
Sbjct: 98 DKRKQIVNFISRNAINPQNKLPHPPKRIEMAMEEAKISVDPFKHLDEQVKSVVKALRPIL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
I+ A+++ V++ A D + T+VE EEW + G + +C I G E
Sbjct: 158 PIKFAEIKFAVKIPA---DYAPKAYGEISSGTTVEREEWQNDGSWVCVCTIPAGIQEEFY 214
Query: 364 ELVRTETRGQGTLELLN 380
++ T+G G +++L+
Sbjct: 215 NMINRLTKGDGEVKILD 231
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G++FEI + V R+ + DI++ + +F N SK + A++E
Sbjct: 2 IPLDKAVVARLESHGEKFEILVDPDLVADIRHGTDIDIEDAVAALFIFENSSKAEKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+LKK F++ D + + I+ K
Sbjct: 62 NLKKVFDSTDFETVARRIIHK 82
>gi|390347062|ref|XP_793688.3| PREDICTED: uncharacterized protein LOC588936 [Strongylocentrotus
purpuratus]
Length = 231
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
Query: 287 KNSKQQALEVIPTLKQC--MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS 344
K ALEVI L++ M+I+RAQMR+R+ + K+ KK+K KL++ +VE E +S
Sbjct: 127 KEEPTYALEVIRKLRETETMAIDRAQMRLRIVLPG--KEAKKVKSKLIQLIATVEEENFS 184
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNLKEVTEGEE 389
G L ++CL DPG YRE++ELV+ TRG+G +E+L+LKEV EG+E
Sbjct: 185 DG-LEMVCLADPGCYREMEELVKESTRGKGMVEVLSLKEVEEGDE 228
>gi|118431347|ref|NP_147753.2| RNA-associated protein [Aeropyrum pernix K1]
gi|150421709|sp|Q9YCU5.2|SDO1_AERPE RecName: Full=Ribosome maturation protein SDO1 homolog
gi|116062670|dbj|BAA80152.2| conserved hypothetical protein [Aeropyrum pernix K1]
Length = 233
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 88/144 (61%), Gaps = 5/144 (3%)
Query: 180 SFREK-----DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQI 234
+FR K D+++VL T T++ +V KG A+ E++KKAF T D + + IL +GE+Q+
Sbjct: 28 AFRYKEKGDVDLEDVLWTDTIYRDVRKGLKASPEEVKKAFGTSDPRRVAEKILKEGEIQL 87
Query: 235 SDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQAL 294
++++R +E + + I + ++ I+ T RP + IEA L+++ F +N+ ++++ QA+
Sbjct: 88 TEEQRRRLLEAKRRQIISYIARNAIDPTTGRPIPEARIEAALEEVRFPINLWRDAESQAV 147
Query: 295 EVIPTLKQCMSIERAQMRVRVEVS 318
E + + + M I A+ + V++
Sbjct: 148 EAVRLIARVMPIRLARALLEVKIP 171
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%)
Query: 21 MKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTED 80
M+ GKRFEI ++ + D+++VL T T++ +V KG A+ E++KKAF T D
Sbjct: 12 MEVRGKRFEILVRPELAFRYKEKGDVDLEDVLWTDTIYRDVRKGLKASPEEVKKAFGTSD 71
Query: 81 QTEICKLIL 89
+ + IL
Sbjct: 72 PRRVAEKIL 80
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%)
Query: 378 LLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 437
+L E+ EE+R +E + + I + ++ I+ T RP + IEA L+++ F +N+
Sbjct: 79 ILKEGEIQLTEEQRRRLLEAKRRQIISYIARNAIDPTTGRPIPEARIEAALEEVRFPINL 138
Query: 438 NKNSKQQALE 447
++++ QA+E
Sbjct: 139 WRDAESQAVE 148
>gi|307353113|ref|YP_003894164.1| ribosome maturation protein SBDS [Methanoplanus petrolearius DSM
11571]
gi|307156346|gb|ADN35726.1| Ribosome maturation protein SBDS [Methanoplanus petrolearius DSM
11571]
Length = 233
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI++ + VF N SK + A +E LKK F D + I+ KGE+ ++ ++R IE
Sbjct: 38 DIEDAVAALFVFENASKAEKAPEESLKKVFGETDFANVAVRIIKKGEIHLTAEQRKKMIE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
++ K + T +S IN +TK P IE + + +++ K+ + E + L+ +
Sbjct: 98 DKRKQVVTFISRNAINPQTKLPHPPMRIEMAMDEARVNIDPFKHVDELVKETVKALRPLI 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
I+ A+M+ V++ A D + AT++E EEW + G + +C I G E
Sbjct: 158 PIKFAEMKFAVKIPA---DYAPKAYGEIASATTIEREEWQNDGSWICVCRIPAGIQEEFY 214
Query: 364 ELVRTETRGQGTLELLN 380
++ T+G G +++L+
Sbjct: 215 NMINRLTKGDGEVKILS 231
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G+RFEI ++ R + DI++ + VF N SK + A +E
Sbjct: 2 IPLEQAVVARLESHGERFEILVDPDRAAEIRQGDDIDIEDAVAALFVFENASKAEKAPEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
LKK F D + I+ K
Sbjct: 62 SLKKVFGETDFANVAVRIIKK 82
>gi|256811315|ref|YP_003128684.1| putative RNA-associated protein [Methanocaldococcus fervens AG86]
gi|256794515|gb|ACV25184.1| Ribosome maturation protein SBDS-like protein [Methanocaldococcus
fervens AG86]
Length = 235
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 96/174 (55%), Gaps = 7/174 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+DE+L VF + SKG+ A +E L K F T D EI K I++KG++Q++ K+R E
Sbjct: 38 DMDELLAIEVVFRDASKGEKAPEELLSKVFGTTDVKEIAKKIILKGQVQLTAKQREEIRE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + I TI+S IN +T P IE ++++ ++++ K++++Q E++ LK+ +
Sbjct: 98 QKKRQIITIISRNTINPQTDTPHPPHRIEKAMEELKINIDIYKSAEEQVPEIVKKLKRVL 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ K L + +V+ EEW+ G L++ + P
Sbjct: 158 PIRFEKRDIAVKIPAEFASKAYNALYQ-----FGAVKQEEWTSDGSLIVLIEIP 206
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R G++FEI + D+DE+L VF + SKG+ A +E
Sbjct: 2 VSLEEAVIARYSSHGEKFEILVDPYLAAKLKEGQNVDMDELLAIEVVFRDASKGEKAPEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 62 LLSKVFGTTDVKEIAKKIILK 82
>gi|71661001|ref|XP_817528.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882725|gb|EAN95677.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 114
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 45/157 (28%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 153
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE +DEVLQ VFTNV
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIETRMDEVLQVERVFTNV 62
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 213
S+G +++++++ F KG +
Sbjct: 63 SRGLYSSEKEIEAVFG-------------------------------KGTS--------- 82
Query: 214 FNTEDQTEICKLILMKGELQISDKERSSQIENQFKDI 250
+ E + IL GELQ++ +ER+++I+ F DI
Sbjct: 83 -----EKEALQYILDHGELQVAQQERAAEIDQMFIDI 114
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNV 61
++I P +Q R TNVA+VR K G R EIACYKNKVIS+R IE +DEVLQ VFTNV
Sbjct: 3 ARIQVPLSQRRHTNVAVVRYTKNGVRLEIACYKNKVISYRGGIETRMDEVLQVERVFTNV 62
Query: 62 SKGQAANKEDLKKAFN 77
S+G +++++++ F
Sbjct: 63 SRGLYSSEKEIEAVFG 78
>gi|15668772|ref|NP_247572.1| putative RNA-associated protein [Methanocaldococcus jannaschii DSM
2661]
gi|2501600|sp|Q58011.1|SDO1_METJA RecName: Full=Ribosome maturation protein SDO1 homolog
gi|1592297|gb|AAB98586.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 240
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 7/174 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D DE+L VF + SKG+ A +E L K F T D EI K I++KG++Q++ K+R E
Sbjct: 43 DFDELLAIEVVFRDASKGEKAPEELLSKIFGTTDVKEIAKKIILKGQVQLTAKQREEIRE 102
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + I TI+S IN +T P IE ++++ ++++ K++++Q E++ LK+ +
Sbjct: 103 QKKRQIITIISRNTINPQTDTPHPPHRIEKAMEELRINIDIYKSAEEQVPEIVKKLKKVL 162
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ K L + +V+ EEW G L++ + P
Sbjct: 163 PIRFEKRDIAVKIPAEFASKAYNALYQ-----FGAVKQEEWQPDGSLIVLIEIP 211
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R G++FEI + D DE+L VF + SKG+ A +E
Sbjct: 7 VSLEEAVIARYTSHGEKFEILVDPYLAAKLKEGQNVDFDELLAIEVVFRDASKGEKAPEE 66
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 67 LLSKIFGTTDVKEIAKKIILK 87
>gi|289193039|ref|YP_003458980.1| Ribosome maturation protein SBDS-like protein [Methanocaldococcus
sp. FS406-22]
gi|288939489|gb|ADC70244.1| Ribosome maturation protein SBDS-like protein [Methanocaldococcus
sp. FS406-22]
Length = 235
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+DE+L VF + +KG+ A +E L K F T D EI K I++KG++Q++ K+R E
Sbjct: 38 DMDELLAVEVVFRDANKGEKAPEELLSKVFGTTDVKEIAKKIILKGQVQLTAKQREEIRE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + I TI+S IN +T P IE ++++ ++++ K++++Q E++ LK+ +
Sbjct: 98 QKKRQIITIISRNTINPQTDTPHPPHRIEKAIEELRINIDIYKSAEEQVPEIVKKLKKVL 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ K L + +V+ EEW G L++ + P
Sbjct: 158 PIRFEKRDIAVKIPAEFASKAYNALYQ-----FGAVKQEEWQPDGSLIVLIEIP 206
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R G++FEI + D+DE+L VF + +KG+ A +E
Sbjct: 2 VSLEEAVIARYNSHGEKFEILVDPYLAAKLKEGQNVDMDELLAVEVVFRDANKGEKAPEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 62 LLSKVFGTTDVKEIAKKIILK 82
>gi|395645194|ref|ZP_10433054.1| Shwachman-Bodian-Diamond syndrome protein [Methanofollis liminatans
DSM 4140]
gi|395441934|gb|EJG06691.1| Shwachman-Bodian-Diamond syndrome protein [Methanofollis liminatans
DSM 4140]
Length = 236
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 4/196 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I++V+ +VF N + G+ A++E L K F T D + IL KGE+ ++ +R IE+
Sbjct: 41 IEDVVAADSVFENFAHGERASEEALMKVFGTTDFEPAARRILAKGEIHLTADQRRRMIED 100
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + T +S IN +TK P IE +++ +++ K+ + E + L+ +
Sbjct: 101 KRRKVITFISRHAINPQTKLPHPPQRIELAMEEARVNIDPFKHVDELVKETVKALRPILP 160
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG-GGLLLICLIDPGKYREIDE 364
I ++R+ V++ A D ++ A ++E EEW G G + +C I G +
Sbjct: 161 IRFEELRLAVKIPA---DHAPRAYGEMQGAATIEREEWLGDGSWVCVCRIPAGIQSDFYA 217
Query: 365 LVRTETRGQGTLELLN 380
LV ++G G +++L+
Sbjct: 218 LVNRLSKGDGQVKILD 233
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G+RFEIA + R E I++V+ +VF N + G+ A++E
Sbjct: 4 IPLDRAVMARLESHGERFEIAVDPELAMKVRQGEEIAIEDVVAADSVFENFAHGERASEE 63
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D + IL K
Sbjct: 64 ALMKVFGTTDFEPAARRILAK 84
>gi|76364271|gb|ABA41649.1| Shwachman-Bodian-Diamond protein-like protein [Malawimonas
jakobiformis]
Length = 202
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 85/142 (59%), Gaps = 2/142 (1%)
Query: 172 MLNISSLTSFREK--DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 229
M N+ S+ +R++ +D VLQ V+TN SKG+ A +LK+ FNTED E ++IL K
Sbjct: 19 MTNVGSVQKYRDQKLGLDNVLQADVVWTNQSKGERAKGAELKETFNTEDIMECIRVILAK 78
Query: 230 GELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNS 289
GE+Q++ ER Q + + ++I V + + K P ++ I+A L +I F V+ + +
Sbjct: 79 GEIQLTAAERREQTDQKRREIVYYVHKYYTDPRAKTPHPIARIDAALTEIKFRVDPDIPA 138
Query: 290 KQQALEVIPTLKQCMSIERAQM 311
++QA + + L + + ++R+++
Sbjct: 139 ERQAQDALKKLVEVIPLKRSEI 160
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 11/116 (9%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M+ +VR + FE+ V +R+ + +D VLQ V+TN SKG+ A +L
Sbjct: 1 MSQTQLVRYRHGKNTFEVMTNVGSVQKYRDQ-KLGLDNVLQADVVWTNQSKGERAKGAEL 59
Query: 73 KKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNK 128
K+ FNTED E ++IL K +I++T A R + KR EI Y +K
Sbjct: 60 KETFNTEDIMECIRVILAK---------GEIQLT-AAERREQTDQKRREIVYYVHK 105
>gi|18977942|ref|NP_579299.1| RNA-associated protein [Pyrococcus furiosus DSM 3638]
gi|397652063|ref|YP_006492644.1| RNA-associated protein [Pyrococcus furiosus COM1]
gi|18893712|gb|AAL81694.1| hypothetical protein PF1570 [Pyrococcus furiosus DSM 3638]
gi|393189654|gb|AFN04352.1| RNA-associated protein [Pyrococcus furiosus COM1]
Length = 236
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Query: 181 FRE-KD--IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
FRE KD I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ +
Sbjct: 32 FREGKDVPIEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEIQLTAQ 91
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R +E + + IATI+ ++ T P V I ++++ V++ K+++ Q +VI
Sbjct: 92 QRREMLEEKKRQIATIIHRNAVDPRTGYPHPVERILRAMEEVGVRVDIFKDAEAQVQDVI 151
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPG 357
++Q + + R + +V + V + V K ++ K T ++ EEW G + + PG
Sbjct: 152 KAIRQVLPL-RIETKV-IAVKIPGEYVGKAYGEVRKFGT-IKKEEWGSDGSWMFLIEIPG 208
Query: 358 KYRE 361
E
Sbjct: 209 GVEE 212
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI +R + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKIHGEVFEILVDPYLARDFREGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|429216662|ref|YP_007174652.1| rRNA metabolism protein, SBDS family [Caldisphaera lagunensis DSM
15908]
gi|429133191|gb|AFZ70203.1| rRNA metabolism protein, SBDS family [Caldisphaera lagunensis DSM
15908]
Length = 232
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 181 FREKD---IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
FRE + I EVL T+F +V KG A+ + L+KAF TED +I + IL +G++Q++++
Sbjct: 31 FREGEKVSISEVLWADTIFKDVKKGLKASPDSLRKAFGTEDIEKIAEKILKEGQIQLTEE 90
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
ER IE + K I + + I+ ++ +P IE L Q+ F+++ K ++ QALE +
Sbjct: 91 ERKKMIEAKRKQIINYIVKNTIDPKSGKPIPEQRIENALDQVRFNIDPFKGAEAQALEAV 150
Query: 298 PTLKQCMSIERAQMRVRVEV-----SAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLIC 352
L M I+ A+ + + + S K+++++ E V+ W G L +
Sbjct: 151 KKLSILMPIKVAKALLEITIPSEYASRAYKEIQRIGE--------VKKANWGSDGSLKVE 202
Query: 353 L-IDPGKYREIDELVRTETRGQGTL 376
L I G E+ + V++ +GQ +
Sbjct: 203 LEIPAGAQIEVIDKVQSLAKGQANI 227
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
+A + +K G++FEI + +R + I EVL T+F +V KG A+ + L+KA
Sbjct: 9 IAWIELK--GQKFEIPVKPDLAFKFREGEKVSISEVLWADTIFKDVKKGLKASPDSLRKA 66
Query: 76 FNTEDQTEICKLIL 89
F TED +I + IL
Sbjct: 67 FGTEDIEKIAEKIL 80
>gi|15920657|ref|NP_376326.1| putative RNA-associated protein [Sulfolobus tokodaii str. 7]
gi|15621440|dbj|BAB65435.1| RNA-binding protein SBDS [Sulfolobus tokodaii str. 7]
Length = 233
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 112/206 (54%), Gaps = 4/206 (1%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L S + + +V+ + ++ +V KG A+ LKK F T D EI + I++KGE+Q++ +
Sbjct: 31 LKSGKSISLSDVVVSDEIYKDVKKGLKASPSALKKVFGTTDFEEIARQIILKGEIQVTAE 90
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R IEN+ K I +S I+ +T P + IE ++Q ++ NK+ + QAL++I
Sbjct: 91 QRKEMIENKKKQIIDYISRNAIDPKTHLPIPRTRIEMAMEQARVQIDPNKDVEGQALQII 150
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDP 356
+ + + I+ A+ + ++V K K+K +L V+ W G G L+ L I
Sbjct: 151 KEIAKVIPIKVAKALIEIKVDP--KHSSKVKSQLHNLG-EVKKTNWLGDGTLIAELEIPA 207
Query: 357 GKYREIDELVRTETRGQGTLELLNLK 382
G +E+ + + + T+G+ +++L +K
Sbjct: 208 GMQQEVIDKLNSLTKGEVEVKILQVK 233
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I R + G+RFEI + ++ + +V+ + ++ +V KG A+ LKK F
Sbjct: 9 IARYEHGGERFEILVKPKEANELKSGKSISLSDVVVSDEIYKDVKKGLKASPSALKKVFG 68
Query: 78 TEDQTEICKLILMK 91
T D EI + I++K
Sbjct: 69 TTDFEEIARQIILK 82
>gi|14520824|ref|NP_126299.1| RNA-associated protein [Pyrococcus abyssi GE5]
gi|15214358|sp|Q9V121.1|SDO1_PYRAB RecName: Full=Ribosome maturation protein SDO1 homolog
gi|5458040|emb|CAB49530.1| Hypothetical protein PAB0418 [Pyrococcus abyssi GE5]
gi|380741366|tpe|CCE70000.1| TPA: putative RNA-associated protein [Pyrococcus abyssi GE5]
Length = 236
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 100/180 (55%), Gaps = 3/180 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E I+E+L T VF + KG A++++++K F T D E+ K+IL KGE+Q++ ++R
Sbjct: 36 KEVPIEEILATPYVFKDAHKGDKASEKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRRE 95
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + IATI+ ++ T P V I ++++ V++ K+++ Q +VI ++
Sbjct: 96 MLEEKKRQIATIIHRHAVDPRTGYPHPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKAIR 155
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ + + R +M+V + V + V + ++ K ++ EEW+ G L + PG E
Sbjct: 156 RILPL-RIEMKV-IAVKIPSEYVGRAYGEVRKFG-RIKKEEWASDGSWLFLIEIPGGVEE 212
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ E I+E+L T VF + KG A+++
Sbjct: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEK 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|409096215|ref|ZP_11216239.1| RNA-associated protein [Thermococcus zilligii AN1]
Length = 236
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E+
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEVQLTAEQRRQMLED 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ ++ T P V I +++ V++ K++++Q VI ++ +
Sbjct: 100 KKRYIATIIHRHAVDPRTGYPHPVDRILRAMEEAGVHVDIFKDAEEQVPAVIKAIRSLLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREIDE 364
I+ + V++ + V K ++ K T ++ EEW S G + + I G E E
Sbjct: 160 IKLEVKVIAVKIPSDY--VGKAYGEVRKFGT-IKREEWGSDGSWMFVIEIPGGIEEEFYE 216
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +LL K
Sbjct: 217 KLNALTKGEALTKLLERK 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVI 130
+++K F T D E+ K+IL K ++++T +M + KR+ +
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK---------GEVQLTAEQRRQMLEDKKRYIATIIHRHAV 113
Query: 131 SWRNNIEKDIDEVLQT 146
R +D +L+
Sbjct: 114 DPRTGYPHPVDRILRA 129
>gi|161527938|ref|YP_001581764.1| RNA-associated protein [Nitrosopumilus maritimus SCM1]
gi|160339239|gb|ABX12326.1| Shwachman-Bodian-Diamond syndrome protein [Nitrosopumilus maritimus
SCM1]
Length = 228
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 105/200 (52%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L + ++T+ KG + E L KAF TEDQTEI ++I+ KG+L ++ +R
Sbjct: 32 KKKDISAILVSEDIYTDSGKGTKPSTEKLLKAFKTEDQTEIAQIIMQKGDLNLTTDQRRK 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
IE++ K I +++ ++ +T P +E +K SV+ K+ +Q +++ L+
Sbjct: 92 MIEDKKKQIVAYIAKTYVDPKTHLPHPPLRVEQAMKDGRVSVDPQKSVDEQVKDIVDKLR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ +++ + + A ++K S++ EEW G L L P R
Sbjct: 152 SIIALKSENLQLEIIIPA---QYASQSYAVLKSVGSLKKEEWQNNGSLKAILEIPAAARP 208
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G ++E++
Sbjct: 209 NVIDRL-GSITKGSASVEVM 227
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M +V + R G++FEI + + ++ +KDI +L + ++T+ KG + E L
Sbjct: 1 MADVTVARFSFEGEKFEILVKPDPALEYKLGKKKDISAILVSEDIYTDSGKGTKPSTEKL 60
Query: 73 KKAFNTEDQTEICKLILMK 91
KAF TEDQTEI ++I+ K
Sbjct: 61 LKAFKTEDQTEIAQIIMQK 79
>gi|14591335|ref|NP_143413.1| RNA-associated protein [Pyrococcus horikoshii OT3]
gi|6648040|sp|O59220.1|SDO1_PYRHO RecName: Full=Ribosome maturation protein SDO1 homolog
gi|3257981|dbj|BAA30664.1| 236aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 236
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 3/176 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++++++K F T D E+ K+IL KGE+Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEKEMEKIFGTSDPYEVAKIILKKGEVQLTAQQRREMLEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ + ++ T P V I ++++ V++ K+++ Q +VI L++ +
Sbjct: 100 KKRQIATIIHKHAVDPRTGYPHPVDRILRAMEEVGVRVDIFKDAEAQVQDVIKALRRVLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ R +M+V G + E V+ ++ EEW G + + PG E
Sbjct: 160 L-RIEMKVIAVKIPGEYVGRSYGE--VRKFGRIKKEEWGSDGSWMFLIEIPGGVEE 212
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ I+E+L T VF + KG A+++
Sbjct: 3 ISVDKAVIARLKIQGETFEILVDPYLARDFKEGKNVPIEEILATPYVFKDAHKGDKASEK 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILKK 83
>gi|407461955|ref|YP_006773272.1| RNA-associated protein [Candidatus Nitrosopumilus koreensis AR1]
gi|407045577|gb|AFS80330.1| RNA-associated protein [Candidatus Nitrosopumilus koreensis AR1]
Length = 242
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L + ++T+ KG + E L KAF TED TEI ++I+ KG+L ++ +R
Sbjct: 46 KKKDISAILVSEDIYTDSGKGTKPSTEKLLKAFKTEDLTEIAQIIMQKGDLNLTTDQRRK 105
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
IE++ K I + +++ ++ +T P +E +K SV+ KN ++Q +++ L+
Sbjct: 106 MIEDKKKQIVSYIAKTYVDPKTHLPHPPLRVEQAMKDGRISVDPQKNVEEQVKDIVDKLR 165
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ +++ + + A ++K S++ EEW G L L P R
Sbjct: 166 SIIALKSENLQLEIIIPA---QYASQSYAVLKSVGSLKKEEWQNNGSLKAILEIPAAARP 222
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G ++E++
Sbjct: 223 NVIDRL-GSITKGSASVEVI 241
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 3 KIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVS 62
+I P+ + M +V + R G++FEI + + ++ +KDI +L + ++T+
Sbjct: 7 QIVIPS--LEMADVTVARFSFEGEKFEILVKPDPALEYKLGKKKDISAILVSEDIYTDSG 64
Query: 63 KGQAANKEDLKKAFNTEDQTEICKLILMK 91
KG + E L KAF TED TEI ++I+ K
Sbjct: 65 KGTKPSTEKLLKAFKTEDLTEIAQIIMQK 93
>gi|407464317|ref|YP_006775199.1| RNA-associated protein [Candidatus Nitrosopumilus sp. AR2]
gi|407047505|gb|AFS82257.1| RNA-associated protein [Candidatus Nitrosopumilus sp. AR2]
Length = 228
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 102/200 (51%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L + ++T+ SKG E L+ AF TED EI ++IL KG+L ++ +R
Sbjct: 32 KKKDISSILVSDEIYTDASKGTRPTAEKLQHAFKTEDPAEIAEIILKKGDLNLTTDQRRK 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
IE + K I T +++ ++ +T P IE +K S++ +K +Q +++ L+
Sbjct: 92 MIEEKKKQIITFIAKTYVDPKTHLPHPPLRIEQAMKDGRVSIDPHKAVDEQVKDIVEKLR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ +++ + + A ++K S+ EEW G L L P R
Sbjct: 152 SIIALKSETLKLEITIPA---QFASQSYAVLKSVGSLNREEWQNNGSLKAILEIPAAARP 208
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G T+E++
Sbjct: 209 NVIDRL-GSITKGSATVEVV 227
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M + +VR G++FEI + + +R +KDI +L + ++T+ SKG E L
Sbjct: 1 MADYTLVRYSFEGEKFEIMVKPDPALDYRLGKKKDISSILVSDEIYTDASKGTRPTAEKL 60
Query: 73 KKAFNTEDQTEICKLILMK 91
+ AF TED EI ++IL K
Sbjct: 61 QHAFKTEDPAEIAEIILKK 79
>gi|240104095|ref|YP_002960404.1| putative RNA-associated protein [Thermococcus gammatolerans EJ3]
gi|239911649|gb|ACS34540.1| Shwachman-Bodian-Diamond syndrome (SBDS) related protein, possibly
a translation elongation factor EFG/EF2 [Thermococcus
gammatolerans EJ3]
Length = 236
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E+
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEVQLTAEQRRQMLED 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K IATI+ ++ T P V I +++ V++ K+++ Q +VI ++ +
Sbjct: 100 KKKYIATIIHRHAVDPRTGYPHPVDRILRAMEEAGVHVDLFKDAEAQVPQVIKAIRPLLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
I ++ V+V D V+ S++ EEW+ G + + PG E
Sbjct: 160 I---KLEVKVIAVKIPSDYVGRAYGEVRKFGSIKREEWASDGSWMFLIEIPGGIEE 212
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|261403705|ref|YP_003247929.1| putative RNA-associated protein [Methanocaldococcus vulcanius M7]
gi|261370698|gb|ACX73447.1| Ribosome maturation protein SBDS-like protein [Methanocaldococcus
vulcanius M7]
Length = 235
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 7/174 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D DE+L VF + SKG+ +E L K F T D EI K I++KG++Q++ K+R E
Sbjct: 38 DFDELLAIEVVFKDASKGEKVPEEVLSKVFGTTDIKEIAKKIILKGQVQLTAKQREEIKE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + I I+S IN +T P + IE + ++ ++++ K++++Q E++ LK+ +
Sbjct: 98 QKKRQIINIISRNTINPQTDTPHPPNRIEKAMDELKINIDIYKSAEEQVPEIVKKLKRVL 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V+V K L + +V+ EEW G L++ + P
Sbjct: 158 PIRFEKRDIAVKVPPEFASKAYPTLYQ-----FGAVKQEEWLPDGSLIVLIEIP 206
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R G+RFEI + D DE+L VF + SKG+ +E
Sbjct: 2 VSLEEAVIARYTSHGERFEILVDPYLAAKLKEGQNVDFDELLAIEVVFKDASKGEKVPEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 62 VLSKVFGTTDIKEIAKKIILK 82
>gi|70606427|ref|YP_255297.1| putative RNA-associated protein [Sulfolobus acidocaldarius DSM 639]
gi|449066639|ref|YP_007433721.1| putative RNA-associated protein [Sulfolobus acidocaldarius N8]
gi|449068913|ref|YP_007435994.1| putative RNA-associated protein [Sulfolobus acidocaldarius Ron12/I]
gi|68567075|gb|AAY80004.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
gi|449035147|gb|AGE70573.1| putative RNA-associated protein [Sulfolobus acidocaldarius N8]
gi|449037421|gb|AGE72846.1| putative RNA-associated protein [Sulfolobus acidocaldarius Ron12/I]
Length = 233
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I + + + T++ ++ KG A+ LKK F T D EI K I++KGE+ ++ ++R +EN
Sbjct: 39 ISDAVVSDTIYKDIKKGLKASPSSLKKVFGTLDFEEIAKQIILKGEIPLTAEQRREILEN 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +S I+ +T P + IE ++Q ++ NK+ + QAL+++ L + +
Sbjct: 99 KRKQIIDYISRNSIDPKTNLPIPRTRIELAMEQARIQIDPNKDVEAQALQIVRELAKLIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I A R +E+ G K K+K +L V+ W G L+ L I G +++ +
Sbjct: 159 IRIA--RALMEIKVGPKFSSKIKSQLANLG-EVKRSNWLNDGTLIAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ + T+G+ +++L +K
Sbjct: 216 KLNSLTKGEVEVKILQVK 233
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
+ I R + +G+RFEI + + RN I + + + T++ ++ KG A+ LKK
Sbjct: 7 MVIARYEHSGERFEILVKPKEAMDLRNGKSVSISDAVVSDTIYKDIKKGLKASPSSLKKV 66
Query: 76 FNTEDQTEICKLILMK 91
F T D EI K I++K
Sbjct: 67 FGTLDFEEIAKQIILK 82
>gi|315229925|ref|YP_004070361.1| hypothetical protein TERMP_00161 [Thermococcus barophilus MP]
gi|315182953|gb|ADT83138.1| hypothetical protein TERMP_00161 [Thermococcus barophilus MP]
Length = 236
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILKKGEVQLTAQQRREMLEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K IATI+ + ++ T P V I +++ V+V K+++ Q +VI +++ +
Sbjct: 100 KKKQIATIIHKHAVDPRTGYPHPVDRILRAMEEAGVRVDVFKDAEAQVPDVIKAIRRFLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++ + V++ + V K ++ K T ++ EEW+ G + + PG E
Sbjct: 160 LKIEVKVIAVKIPSDY--VGKAYGEVRKFGT-IKREEWASDGSWMFLIEIPGGVEE 212
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILKK 83
>gi|350525893|ref|YP_002582204.2| hypothetical protein [Thermococcus sp. AM4]
gi|345650712|gb|EEB73902.2| probable exome subunit, conserved hypothetical protein
[Thermococcus sp. AM4]
Length = 232
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 93/176 (52%), Gaps = 3/176 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R
Sbjct: 32 KEVPIEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEVQLTAEQRRQ 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E++ K IATI+ ++ T P V I +++ V++ K+++ Q +VI ++
Sbjct: 92 MLEDKKKYIATIIHRHAVDPRTGYPHPVDRILRAMEEAGVHVDLFKDAEAQVPKVIKAIR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPG 357
+ I ++ V+V D V+ +++ EEW+ G + + PG
Sbjct: 152 PLLPI---KLEVKVIAVKIPSDYVGRAYGEVRKFGNIKREEWASDGSWMFLIEIPG 204
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M I R+K G+ FEI ++ E I+E+L T VF + KG A++ ++
Sbjct: 1 MDKAVIARLKTHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEHEM 60
Query: 73 KKAFNTEDQTEICKLILMK 91
+K F T D E+ K+IL K
Sbjct: 61 EKIFGTSDPYEVAKIILRK 79
>gi|406699459|gb|EKD02662.1| clathrin heavy chain 1 [Trichosporon asahii var. asahii CBS 8904]
Length = 384
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 226 ILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNV 285
+L +GELQ+++ ER Q+ + ++IAT+V+E ++ TKR TV M+E + +I +S
Sbjct: 4 VLEEGELQVNNLERGHQLASLSREIATLVAEMTVDPATKRKHTVGMVEKAMTEIGYSTRA 63
Query: 286 NKNSKQQALEVIPTLKQ---CMSIERAQMRVRVEVSAGVKDVKKLKEKLV 332
+K +K QAL++I L Q + +ER +MRVR+ + A KD K++KEKL+
Sbjct: 64 DKTAKAQALDLIRQLSQPDSVLPVERVRMRVRITMPA--KDAKRIKEKLM 111
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 390 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
ER Q+ + ++IAT+V+E ++ TKR TV M+E + +I +S +K +K QAL+
Sbjct: 16 ERGHQLASLSREIATLVAEMTVDPATKRKHTVGMVEKAMTEIGYSTRADKTAKAQALD 73
>gi|449328851|gb|AGE95127.1| hypothetical protein ECU08_1610 [Encephalitozoon cuniculi]
Length = 223
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 53/231 (22%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP NQ ++ NV+IV +KK G+R+E+A Y NK+ +RN + + E+LQT T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSK 60
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
G+ A R+ D+D +TH
Sbjct: 61 GEIA----------------------RQGDLDLFCRTH---------------------- 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI + IL G Q S+ R + E ++I I+ K T R + + +
Sbjct: 77 ----EEIVREILDSGYEQKSEATRVYEQEKTEREIVQILRNKV--TRGGRHLSEASLREA 130
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKK 326
+ ++H ++ V NSK+Q+ E++ L++ M +R +RV VE+S V + K
Sbjct: 131 IGKVH-NIYVG-NSKKQSQEILSKLEK-MGFDRVGVRVSVEMSDKVAEFVK 178
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP NQ ++ NV+IV +KK G+R+E+A Y NK+ +RN + + E+LQT T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSK 60
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL 89
G+ A + DL T + EI + IL
Sbjct: 61 GEIARQGDLDLFCRTHE--EIVREIL 84
>gi|355572114|ref|ZP_09043296.1| Shwachman-Bodian-Diamond syndrome protein [Methanolinea tarda
NOBI-1]
gi|354824830|gb|EHF09069.1| Shwachman-Bodian-Diamond syndrome protein [Methanolinea tarda
NOBI-1]
Length = 231
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 102/196 (52%), Gaps = 4/196 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
++E++ VF+N S+G A++E L+K F T D +EI I+ KGE+ ++ ++R I +
Sbjct: 39 LEEMVAALYVFSNASRGTRASEESLEKVFQTTDFSEIAPRIIRKGEIHLTAEQRRQMIAD 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + ++ IN +T P IE +++ ++++ K+ + E + L+ +
Sbjct: 99 KRRQVIHFIARNAINPQTGLPHPPQRIEMAMEEARVNIDLYKSLDELVKETVKALRPILP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYREIDE 364
I ++R+ V++ A D ++ A ++E +EW G + I I G +
Sbjct: 159 IRFEELRIAVKIPA---DFAPRAFGEIQSAATIERDEWQKDGSWICIVRIPAGIQGDFYG 215
Query: 365 LVRTETRGQGTLELLN 380
LV ++GQG +++L+
Sbjct: 216 LVNRISKGQGEMKILD 231
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 44/81 (54%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + R++ G++FEI + + +R + ++E++ VF+N S+G A++E
Sbjct: 2 IPLEKAVCARLESHGEKFEILVDPDLAVRFRQGEDVPLEEMVAALYVFSNASRGTRASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L+K F T D +EI I+ K
Sbjct: 62 SLEKVFQTTDFSEIAPRIIRK 82
>gi|337283872|ref|YP_004623346.1| putative RNA-associated protein [Pyrococcus yayanosii CH1]
gi|334899806|gb|AEH24074.1| putative RNA-associated protein [Pyrococcus yayanosii CH1]
Length = 236
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKLFGTSDPYEVAKIILRKGEVQLTAQQRREMMEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ ++ T P V I ++++ V++ K+++ Q +VI L++ +
Sbjct: 100 KKRQIATIIHRHAVDPRTGYPHPVDRILKAMEEVGVRVDIFKDAEAQVQDVIKALRRVLP 159
Query: 306 --IERAQMRVRVE---VSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYR 360
IE + V++ V +V+K ++ EEW G + + PG
Sbjct: 160 LKIEVKIIAVKIPSEYVGRAYGEVRKF--------GKIKREEWGSDGSWMFLIEIPGGVE 211
Query: 361 E 361
E
Sbjct: 212 E 212
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKIHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKLFGTSDPYEVAKIILRK 83
>gi|389852859|ref|YP_006355093.1| RNA-associated protein [Pyrococcus sp. ST04]
gi|388250165|gb|AFK23018.1| putative RNA-associated protein [Pyrococcus sp. ST04]
Length = 236
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 9/179 (5%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ ++ T P V I ++++ V++ K+++ Q +VI L++ +
Sbjct: 100 KKRQIATIIHRHAVDPRTGYPHPVDRILKAMEEVGVRVDIFKDAEAQVQDVIKALRRVLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKL---VKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+++ V+V A VK + + V+ ++ EEW G + + PG E
Sbjct: 160 -----LKIEVKVIA-VKIPGEYAGRAYGEVRKFGRIKREEWGSDGSWMFLIEIPGGVEE 212
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKVHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|390960835|ref|YP_006424669.1| putative RNA-associated protein [Thermococcus sp. CL1]
gi|390519143|gb|AFL94875.1| putative RNA-associated protein [Thermococcus sp. CL1]
Length = 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 107/202 (52%), Gaps = 4/202 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E I+E+L T VF + KG A++ +++K F T D E+ K+IL KG++Q++ ++R
Sbjct: 36 KEVPIEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGDVQLTAEQRRQ 95
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E++ + IATI+ ++ T P V I +++ +++ K+++ Q VI ++
Sbjct: 96 MLEDKRRYIATIIHRHAVDPRTGYPHPVDRILRAMEEAGVHIDLFKDAEAQVPGVIKAIR 155
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I + +M+V + V V + ++ K T ++ EEW S G + + I G
Sbjct: 156 PLLPI-KLEMKV-IAVKIPGDYVGRAYGEVRKFGT-IKREEWASDGSWMFLIEIPGGVEE 212
Query: 361 EIDELVRTETRGQGTLELLNLK 382
E E + T+G+ +L+ K
Sbjct: 213 EFYEKLNALTKGEAVTKLIERK 234
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ E I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|57641571|ref|YP_184049.1| putative RNA-associated protein [Thermococcus kodakarensis KOD1]
gi|57159895|dbj|BAD85825.1| predicted exosome subunit, UPF0023 family [Thermococcus
kodakarensis KOD1]
Length = 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KGE+Q++ ++R +E+
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGEVQLTAEQRRQMLED 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IAT++ ++ T P V I +++ +++ K+++ Q +VI ++ +
Sbjct: 100 KKRYIATVIHRHAVDPRTGYPHPVDRILRAMEEAGVHIDIFKDAEAQVPQVIKAIRPILP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREIDE 364
+ ++ V+V D V+ +++ EEW S G + + I G E E
Sbjct: 160 L---KLEVKVIAVKIPGDYVGRAYGEVRKFGNIKREEWGSDGSWMFVIEIPGGVEEEFYE 216
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +LL K
Sbjct: 217 KLNALTKGEAITKLLERK 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVI 130
+++K F T D E+ K+IL K ++++T +M + KR+ +
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK---------GEVQLTAEQRRQMLEDKKRYIATVIHRHAV 113
Query: 131 SWRNNIEKDIDEVLQT 146
R +D +L+
Sbjct: 114 DPRTGYPHPVDRILRA 129
>gi|332157781|ref|YP_004423060.1| putative RNA-associated protein [Pyrococcus sp. NA2]
gi|331033244|gb|AEC51056.1| putative RNA-associated protein [Pyrococcus sp. NA2]
Length = 236
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 95/182 (52%), Gaps = 15/182 (8%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++++++K F T D E+ K+IL KGE+Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEKEMEKIFGTSDPYEVAKIILRKGEVQLTAQQRREMLEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ ++ T P V I ++++ V++ K+++ Q +VI +++ +
Sbjct: 100 KKRQIATIIHRHAVDPRTGYPHPVERILKAMEEVGVRVDIFKDAEAQVQDVIKAIRRVLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKL------VKCATSVENEEWSGGGLLLICLIDPGKY 359
+RV +V A VK E + V+ ++ EEW G + + PG
Sbjct: 160 -----LRVETKVIA----VKIPSEYVGRAYGEVRKFGKIKREEWGSDGSWMFLIEIPGGV 210
Query: 360 RE 361
E
Sbjct: 211 EE 212
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A+++
Sbjct: 3 ISVDKAVIARLKIQGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEK 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|341582110|ref|YP_004762602.1| putative RNA-associated protein [Thermococcus sp. 4557]
gi|340809768|gb|AEK72925.1| putative RNA-associated protein [Thermococcus sp. 4557]
Length = 236
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 105/202 (51%), Gaps = 4/202 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
R+ I++VL T VF + KG A++ +++K F T D E+ K+IL KG++Q++ ++R
Sbjct: 36 RDVPIEDVLATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKVILRKGDVQLTAEQRRQ 95
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
IE++ + IAT++ ++ T P V I + + V++ K+++ Q VI ++
Sbjct: 96 MIEDKRRYIATVIHRHAVDPRTGFPHPVDRILRAMDEAGVHVDLFKDAEAQIPGVIKAIR 155
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I + +M+V + V V K ++ K ++ EEW S G + + I G
Sbjct: 156 PLLPI-KMEMKV-IAVKVPGDYVGKAYGEVRKFG-KIKREEWGSDGSWMFLIEIPGGIEE 212
Query: 361 EIDELVRTETRGQGTLELLNLK 382
E E + TRG+ +L+ K
Sbjct: 213 EFYEKLNALTRGEAVTKLIERK 234
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I++VL T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGRDVPIEDVLATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVI 130
+++K F T D E+ K+IL K +++T +M + +R+ +
Sbjct: 63 EMEKIFGTSDPYEVAKVILRK---------GDVQLTAEQRRQMIEDKRRYIATVIHRHAV 113
Query: 131 SWRNNIEKDIDEVLQT 146
R +D +L+
Sbjct: 114 DPRTGFPHPVDRILRA 129
>gi|294874687|ref|XP_002767050.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239868478|gb|EEQ99767.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 313
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
EK VLQ+ V+TNVS+G A +DLK F T DQ EICK ILM G LQI+ ER
Sbjct: 176 EKKHSNVLQSEAVYTNVSRGDRALAKDLKACFGTTDQKEICKEILMHGTLQITGTEREFF 235
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVN 286
E++ ++ T ++E CI++ T P T I + L+ I++ V V
Sbjct: 236 HESRTNEVITQLAEMCIDSRTGFPLTKDQISSALQDINYQVRVG 279
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%)
Query: 45 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKDMSKI 96
EK VLQ+ V+TNVS+G A +DLK F T DQ EICK ILM +I
Sbjct: 176 EKKHSNVLQSEAVYTNVSRGDRALAKDLKACFGTTDQKEICKEILMHGTLQI 227
>gi|19173486|ref|NP_597289.1| similarity to HYPOTHETICAL PROTEINS of the UPF0023 family
[Encephalitozoon cuniculi GB-M1]
gi|74621608|sp|Q8SUL0.1|SDO1_ENCCU RecName: Full=Ribosome maturation protein SDO1
gi|19171075|emb|CAD26465.1| similarity to HYPOTHETICAL PROTEINS of the UPF0023 family
[Encephalitozoon cuniculi GB-M1]
Length = 223
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 53/231 (22%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP NQ ++ NV+IV +KK G+R+E+A Y NK+ +RN + + E+LQT T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSK 60
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
G+ A R+ D+D +TH
Sbjct: 61 GEIA----------------------RQGDLDLFCRTH---------------------- 76
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
EI + IL G Q S+ R + E ++I I+ K T R + + +
Sbjct: 77 ----EEIVREILDCGYEQKSEATRVYEQEKTEREIVQILRNKV--TRGGRHLSEASLREA 130
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKK 326
+ ++H ++ V NSK+Q+ E++ L++ M +R +RV VE+S V + K
Sbjct: 131 IGKVH-NIYVG-NSKKQSQEILSKLEK-MGFDRVGVRVSVEMSDKVAEFVK 178
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP NQ ++ NV+IV +KK G+R+E+A Y NK+ +RN + + E+LQT T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSK 60
Query: 64 GQAANKEDL 72
G+ A + DL
Sbjct: 61 GEIARQGDL 69
>gi|242399328|ref|YP_002994752.1| RNA-associated protein [Thermococcus sibiricus MM 739]
gi|242265721|gb|ACS90403.1| putative RNA-associated protein [Thermococcus sibiricus MM 739]
Length = 236
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 96/180 (53%), Gaps = 3/180 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E ++E+L T +F + KG A++ +++K F T D EI K+IL KGE+Q++ ++R
Sbjct: 36 KELPVEEILATPYIFKDAHKGDKASEHEMEKIFGTNDPYEIAKIILRKGEVQLTAEQRKQ 95
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E++ K IA I+ ++ + P I ++++ V++ K+++ Q E+I L+
Sbjct: 96 MLEDKKKQIAMIIHRNAVDPRSGYPHPPDRILKAMEEVGVRVDIFKDAQAQVPEIIKALR 155
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ + ++ + V++ + K E V+ +++ EEW+ G + + PG E
Sbjct: 156 RVLPLKIETKVIAVKIPSEYSG-KAYGE--VRTFGNIKREEWASDGSWMFLIEIPGGIEE 212
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R+K G+ FEI ++ E ++E+L T +F + KG A++
Sbjct: 3 VSIDKAVIARLKTHGEIFEILVDPYLARDFKEGKELPVEEILATPYIFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D EI K+IL K
Sbjct: 63 EMEKIFGTNDPYEIAKIILRK 83
>gi|407038061|gb|EKE38927.1| SBDS protein C-terminal domain containing protein [Entamoeba
nuttalli P19]
Length = 202
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 109/183 (59%), Gaps = 12/183 (6%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
++EVLQ ++ +V KG+ A K+DLK+AF ++ EI IL GE+Q +KER Q+++
Sbjct: 3 LNEVLQLTRIYQSVEKGEVAKKKDLKEAFGKTNEDEIILEILKNGEIQKGEKERKVQLDS 62
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC-- 303
KDI ++++K I+ ETK+P ++ M E +K + +++ +K +KQQ+L ++ LK+
Sbjct: 63 LNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNIVTSKTAKQQSLLILKLLKKHPE 122
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-ATSVENE---EWSGGGLLLICLIDPGKY 359
+ IER M + V+++ K L+E+++ ++N+ E S + +IDP +
Sbjct: 123 IPIERMPMVISVDIT------KDLEEEILNLIKDQIKNQVIKESSETRIKYEFIIDPSAF 176
Query: 360 REI 362
E+
Sbjct: 177 HEL 179
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 48/70 (68%)
Query: 376 LELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSV 435
LE+L E+ +GE+ER Q+++ KDI ++++K I+ ETK+P ++ M E +K + +++
Sbjct: 41 LEILKNGEIQKGEKERKVQLDSLNKDIMILLTQKLIHKETKKPISMKMAEKLIKDLKYNI 100
Query: 436 NVNKNSKQQA 445
+K +KQQ+
Sbjct: 101 VTSKTAKQQS 110
>gi|124486158|ref|YP_001030774.1| putative RNA-associated protein [Methanocorpusculum labreanum Z]
gi|124363699|gb|ABN07507.1| Shwachman-Bodian-Diamond syndrome protein [Methanocorpusculum
labreanum Z]
Length = 233
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 6/198 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI++V+ V+ N S+G + EDL KAF T D TEI K I++KGE+ ++ ++R IE
Sbjct: 38 DIEDVVAAMYVYENASRGDKSPDEDLIKAFKTTDFTEIAKHIILKGEIHLTTEQRRHLIE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + + T ++ +N +T P V IE L Q+ + + K+ E + L+ +
Sbjct: 98 EKRRRVITFIARNAVNPQTGLPHPVMRIEMALDQVRINYDPFKSVDDLVKEAVKALRPIL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV--ENEEW-SGGGLLLICLIDPGKYRE 361
I + R+ + D + A V + EW + G + + I G E
Sbjct: 158 PIRFEERRIAAKFPM---DFAARAYAAISGAAYVTMDKNEWQNDGSWICVVTIPAGMQEE 214
Query: 362 IDELVRTETRGQGTLELL 379
L +G L++L
Sbjct: 215 FFNLANAAAKGDAQLKIL 232
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G +FE+ R+ + DI++V+ V+ N S+G + E
Sbjct: 2 ISLDDAVTARLETHGLKFELLVDPELADKMRHGEDLDIEDVVAAMYVYENASRGDKSPDE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
DL KAF T D TEI K I++K
Sbjct: 62 DLIKAFKTTDFTEIAKHIILK 82
>gi|302500477|ref|XP_003012232.1| hypothetical protein ARB_01492 [Arthroderma benhamiae CBS 112371]
gi|291175789|gb|EFE31592.1| hypothetical protein ARB_01492 [Arthroderma benhamiae CBS 112371]
Length = 358
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 45/162 (27%)
Query: 118 KRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNMLNISS 177
KR+E+ACYKNK++ +R+ E D+D VLQ TVF +VS+G A +L K+F
Sbjct: 20 KRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLSVSRGHTAPTAELAKSFG-------- 71
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
++ I++V+Q IL KGE+Q+ +K
Sbjct: 72 ----KDYKIEDVIQE---------------------------------ILRKGEVQVGEK 94
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 279
ER ++ K++ IVS + ++ +KR +T MI L Q+
Sbjct: 95 ERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMIGKALDQL 136
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 26 KRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTE 83
KR+E+ACYKNK++ +R+ E D+D VLQ TVF +VS+G A +L K+F + + E
Sbjct: 20 KRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLSVSRGHTAPTAELAKSFGKDYKIE 77
>gi|402469081|gb|EJW04142.1| hypothetical protein EDEG_01578 [Edhazardia aedis USNM 41457]
Length = 229
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 47/225 (20%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP N ++TNV+ + +KK G FE+A Y NK+ +R
Sbjct: 1 MFTPQNIKKLTNVSTISVKKNGVNFELALYPNKLRDYR---------------------- 38
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
LK N N E+L T +F NVSKG+ ++K DL+ F
Sbjct: 39 --------LKLVTNLN----------------EILHTTEIFKNVSKGELSSKRDLQNCFK 74
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
++ EI K IL G ++S+K R+ ++EN+ K++ TI+ K I + + +V+ I+
Sbjct: 75 NQNNDEIIKFILDNGIEKLSEKTRNYELENKEKEVITIIQRK-ITDKNDKMLSVNRIKDL 133
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAG 320
+ S+++ + +K QA E+I + + ++ ++V + S G
Sbjct: 134 FRYNQISIDLRREAKVQANEIIKKILKNSDYKKINIKVEIIGSLG 178
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP N ++TNV+ + +KK G FE+A Y NK+ +R + +++E+L T +F NVSK
Sbjct: 1 MFTPQNIKKLTNVSTISVKKNGVNFELALYPNKLRDYRLKLVTNLNEILHTTEIFKNVSK 60
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTN 107
G+ ++K DL+ F ++ EI K IL + K+ T + N
Sbjct: 61 GELSSKRDLQNCFKNQNNDEIIKFILDNGIEKLSEKTRNYELEN 104
>gi|336121265|ref|YP_004576040.1| Shwachman-Bodian-Diamond syndrome protein [Methanothermococcus
okinawensis IH1]
gi|334855786|gb|AEH06262.1| Shwachman-Bodian-Diamond syndrome protein [Methanothermococcus
okinawensis IH1]
Length = 235
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 8/198 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I ++L V+ + KG+ A++E L+K F T D EI K I++KG +Q++ ++R E
Sbjct: 38 NISDILAAEAVYKDSGKGEKASEEVLEKVFGTTDIHEIAKKIILKGNVQLTAQQRKEMKE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I ++++ IN +T P IE L++I ++++ K++++Q +I L++ +
Sbjct: 98 QKRKQIVSLIARNTINPQTDAPHPPKRIENALEEIRANIDIYKSAEEQIPNIIKDLRRIL 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYRE 361
I E+ + VR+ L E +++ EEW S G L+ + I G E
Sbjct: 158 PIKFEKRDIAVRIPPEYASSAYHSLHE-----YGTIKQEEWQSDGSLVFVIEIPSGIENE 212
Query: 362 IDELVRTETRGQGTLELL 379
+ T+G +LL
Sbjct: 213 FYGYLNKVTKGNVQTKLL 230
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R++ G++FEI + +I ++L V+ + KG+ A++E
Sbjct: 2 VSLEKAVIARLQSHGEKFEILVDPYLAAKLKEGQPINISDILAAEAVYKDSGKGEKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L+K F T D EI K I++K
Sbjct: 62 VLEKVFGTTDIHEIAKKIILK 82
>gi|332796513|ref|YP_004458013.1| RNA-associated exosome subunit protein [Acidianus hospitalis W1]
gi|332694248|gb|AEE93715.1| RNA-associated exosome subunit protein [Acidianus hospitalis W1]
Length = 232
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 106/197 (53%), Gaps = 4/197 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D + + IL+KGE+ I+ ++R +E+
Sbjct: 38 LSDVVISDTIYKDVKKGLKASPSALKKVFGTTDFETVAREILLKGEMPITAEQRKEMLES 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K + + I+ +T P + IEA +++ +++N++ + QAL++I L + +
Sbjct: 98 KKKQLIDFIHRNAIDPKTHLPIPPARIEAAMEEARVQIDLNRDVESQALQIIHELARIIP 157
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A R +E+ K K+K +L SV+ W G L+ + I G E+ +
Sbjct: 158 IKVA--RATLEIKVPAKYSSKVKSQLSNLG-SVKKTNWLNDGTLIAEIEIPAGAQEEVID 214
Query: 365 LVRTETRGQGTLELLNL 381
+ + T+G+ +++L +
Sbjct: 215 KLNSLTKGEVEVKVLQV 231
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +++ + G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 5 DYVVIKYESHGERFEILVKPKEAMAFRSGKSISLSDVVISDTIYKDVKKGLKASPSALKK 64
Query: 75 AFNTEDQTEICKLILMK 91
F T D + + IL+K
Sbjct: 65 VFGTTDFETVAREILLK 81
>gi|324534685|gb|ADY49384.1| Ribosome maturation protein SBDS [Ascaris suum]
Length = 95
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 296 VIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLID 355
++P L++ M I+RA+MR+R+ V A K+ K++ ++L +S+E E+W G L ++ LID
Sbjct: 1 MVPKLREIMKIDRAEMRLRISVEA--KEAKRVHDRLKALFSSIEVEDWDQGNLEIVGLID 58
Query: 356 PGKYREIDELVRTETRGQGTLELLNLKEVTEGEEERS 392
PG YR IDEL+ ET+ +ELL+LK + EG+ E S
Sbjct: 59 PGSYRAIDELMHKETKNCARMELLSLKVINEGDIEIS 95
>gi|333910830|ref|YP_004484563.1| Shwachman-Bodian-diamond syndrome protein [Methanotorris igneus Kol
5]
gi|333751419|gb|AEF96498.1| Shwachman-Bodian-Diamond syndrome protein [Methanotorris igneus Kol
5]
Length = 235
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 93/172 (54%), Gaps = 3/172 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI E+L V+ + KG+ A+++ L K F T D EI K I++KG +Q++ ++R E
Sbjct: 38 DISEILAIEAVYKDSGKGEKASEDALLKVFGTTDVKEIAKQIILKGHVQLTAQQRKEMQE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I +++++ IN +T P IE L++ ++++ K++++Q +I L++ +
Sbjct: 98 QKKKQIISLIAKNTINPQTDTPHPPKRIEKALEEARVNIDIYKSAEEQLPRIIKELRKIL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I+ + V +++ A + ++ +V+ EEW G L++ + P
Sbjct: 158 PIKFEKRDVAIKIPA---EFAGSAYHILHQYGTVKQEEWQSDGSLIVVIEIP 206
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R + G++FEI + + DI E+L V+ + KG+ A+++
Sbjct: 2 VSVDKAVIARYQSHGEKFEILVDPYLAAKLKEGQDIDISEILAIEAVYKDSGKGEKASED 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 62 ALLKVFGTTDVKEIAKQIILK 82
>gi|218884637|ref|YP_002429019.1| putative RNA-associated protein [Desulfurococcus kamchatkensis
1221n]
gi|218766253|gb|ACL11652.1| Shwachman-Bodian-Diamond syndrome protein - like protein
[Desulfurococcus kamchatkensis 1221n]
Length = 231
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
IDEV+ ++ + KG A+ E +K+ F T+D + I+ +GELQ++ ++R IE
Sbjct: 37 IDEVVAGDFIYKDARKGLKASPESMKEVFGTDDPKVVAVEIIKRGELQLTAEQRRKFIEE 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ I +++ I+ +TK P V +E ++Q S++ K ++QQ ++ L + +
Sbjct: 97 KRAQILNLIARNAIDPKTKLPIPVKRLELAMEQARISIDPYKPAEQQMEHIVSQLAKVIP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ V V + + + LK+ ++ + + +W G L + L I G +E+ +
Sbjct: 157 IKIAKAYVAVRIPSEYAS-RSLKQ--IQAMGTTKKVQWREDGSLYVELEIPAGLQQELID 213
Query: 365 LVRTETRGQGTLELLNL 381
V T+G G +++LN+
Sbjct: 214 KVNALTKGSGEVKILNV 230
>gi|432330571|ref|YP_007248714.1| rRNA metabolism protein, SBDS family [Methanoregula formicicum
SMSP]
gi|432137280|gb|AGB02207.1| rRNA metabolism protein, SBDS family [Methanoregula formicicum
SMSP]
Length = 234
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 98/197 (49%), Gaps = 4/197 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I++V+ VF N SK A+ E L K F T D + + I++KGE+ ++ +R +E
Sbjct: 38 EIEDVVAALNVFGNSSKATRASDESLMKVFQTTDFDTVARKIIIKGEIHLTADQRKQMVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + + T ++ +N + P + IE +++ +++ K+ +Q E + L+ +
Sbjct: 98 EKRRQVITFIARNAVNPQDGHPHPPARIERAMEEARVNIDPFKHVDEQVKETVKALRPLL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
I ++R+ +++ D + A ++E +EW G + + I G E
Sbjct: 158 PIRFEELRLAIKIPP---DYAARSYGDIAAAATMEKDEWLKDGSWVCVVRIPAGIQSEFY 214
Query: 364 ELVRTETRGQGTLELLN 380
+L+ ++G+G +++LN
Sbjct: 215 DLINKLSKGEGQVKILN 231
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + + R++ G+RFEI +K R +I++V+ VF N SK A+ E
Sbjct: 2 IPLDHAVVARLESHGERFEILVDPHKAALVRQGQPVEIEDVVAALNVFGNSSKATRASDE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D + + I++K
Sbjct: 62 SLMKVFQTTDFDTVARKIIIK 82
>gi|154151362|ref|YP_001404980.1| RNA-associated protein [Methanoregula boonei 6A8]
gi|153999914|gb|ABS56337.1| Shwachman-Bodian-Diamond syndrome protein [Methanoregula boonei
6A8]
Length = 234
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 118/279 (42%), Gaps = 50/279 (17%)
Query: 103 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 162
I + N + R++ G+RFEI +++ H + +G+ N E
Sbjct: 2 IPLENAVVARLESYGERFEI--------------------LVEPHLA-ARIKQGEDINIE 40
Query: 163 DLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEI 222
D A N VF N SK A++E L+K F+T D +
Sbjct: 41 DAVAALN-------------------------VFGNSSKATRASEESLEKVFHTSDFATV 75
Query: 223 CKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 282
K I+ KGE+ ++ +R E + + + T ++ +N +T P I +++ +
Sbjct: 76 AKKIIEKGEIHLTSDQRREMTEEKRRQVITFIARNAVNPQTGHPHPPQRIAMAMEEARVN 135
Query: 283 VNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEE 342
++ K+ +Q E + L+ + I ++R+ V++ D + A ++E +E
Sbjct: 136 IDPFKHVDEQVKETVKALRPLLPIRFEELRLAVKIP---PDFAARAYGDIAAACTMEKDE 192
Query: 343 WS-GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLN 380
W G + + I G E +L+ ++G+G +++LN
Sbjct: 193 WQKDGSWVCVVRIPAGIQGEFYDLINKLSKGEGQVKILN 231
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + N + R++ G+RFEI + + + +I++ + VF N SK A++E
Sbjct: 2 IPLENAVVARLESYGERFEILVEPHLAARIKQGEDINIEDAVAALNVFGNSSKATRASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L+K F+T D + K I+ K
Sbjct: 62 SLEKVFHTSDFATVAKKIIEK 82
>gi|393796024|ref|ZP_10379388.1| RNA-associated protein [Candidatus Nitrosoarchaeum limnia BG20]
Length = 228
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L ++T+ KG + E L KAF TED EI +++L KG+L ++ +R
Sbjct: 32 KKKDISSILIADEIYTDSGKGTKPSTEKLLKAFKTEDVNEIAEIMLKKGDLNLTTDQRRK 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
++++ K I + +++ ++ T P IE LK ++ K+ +Q E++ L+
Sbjct: 92 MLDDKRKQIISFIAKTYVDPRTHLPHPPIRIEQALKDGRITIEPQKSVDEQVPEIVDKLR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ + + + + A ++K S++ EEW G L L P R
Sbjct: 152 SIIALKSENLDLEITIPA---QYASQSYAVLKSVGSLKKEEWQNNGSLKAILEIPAGARP 208
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G T+E++
Sbjct: 209 NVIDRL-GSITKGSATVEVM 227
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
MT+V +VR G++FEI + + ++ +KDI +L ++T+ KG + E L
Sbjct: 1 MTDVTVVRYSYEGEKFEILVKPDPALDYKMGKKKDISSILIADEIYTDSGKGTKPSTEKL 60
Query: 73 KKAFNTEDQTEICKLILMK 91
KAF TED EI +++L K
Sbjct: 61 LKAFKTEDVNEIAEIMLKK 79
>gi|212223173|ref|YP_002306409.1| putative RNA-associated protein [Thermococcus onnurineus NA1]
gi|212008130|gb|ACJ15512.1| predicted exosome subunit, UPF0023 family [Thermococcus onnurineus
NA1]
Length = 236
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 90/176 (51%), Gaps = 3/176 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L T VF + KG A++ +++K F T D E+ K+IL KG++Q++ ++R +E
Sbjct: 40 IEEILATPYVFKDAHKGDKASEHEMEKIFGTSDPYEVAKIILRKGDVQLTAEQRRQMLEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + IATI+ ++ T P V I +++ V++ K+++ Q +I ++ +
Sbjct: 100 KRRYIATIIHRHAVDPRTGYPHPVDRILRAMEEAGVHVDLFKDAEAQVPGIIKAIRPILP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++ + V++ D V+ +++ EEW+ G + + PG E
Sbjct: 160 LKMEMKVIAVKIPG---DYVGRAYGEVRKFGNIKREEWASDGSWMFLIEIPGGVEE 212
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + I R+K G+ FEI ++ + I+E+L T VF + KG A++
Sbjct: 3 ISVDKAVIARLKTHGETFEILVDPYLARDFKEGKDVPIEEILATPYVFKDAHKGDKASEH 62
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+++K F T D E+ K+IL K
Sbjct: 63 EMEKIFGTSDPYEVAKIILRK 83
>gi|390939123|ref|YP_006402861.1| Ribosome maturation protein SBDS [Desulfurococcus fermentans DSM
16532]
gi|390192230|gb|AFL67286.1| Ribosome maturation protein SBDS [Desulfurococcus fermentans DSM
16532]
Length = 231
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 104/197 (52%), Gaps = 4/197 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
IDEV+ ++ + KG A+ E +K+ F T+D + I+ +GELQ++ ++R IE
Sbjct: 37 IDEVVAGDFIYKDARKGLKASPESMKEVFGTDDPKVVAVEIIKRGELQLTAEQRRKFIEE 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ I +++ I+ +TK P V +E ++Q S++ K ++QQ ++ L + +
Sbjct: 97 KRAQILNLIARNAIDPKTKLPIPVKRLELAMEQARISIDPYKPAEQQMEHIVSQLAKVIP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ V V + + + LK+ ++ + + +W G L + L I G +E+ +
Sbjct: 157 IKIAKAYVAVRIPSEYAS-RSLKQ--IQVMGTTKKTQWREDGSLYMELEIPAGLQQELID 213
Query: 365 LVRTETRGQGTLELLNL 381
V T+G G +++LN+
Sbjct: 214 KVNALTKGSGEVKILNV 230
>gi|307594973|ref|YP_003901290.1| Ribosome maturation protein SBDS [Vulcanisaeta distributa DSM
14429]
gi|307550174|gb|ADN50239.1| Ribosome maturation protein SBDS [Vulcanisaeta distributa DSM
14429]
Length = 232
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 106/200 (53%), Gaps = 12/200 (6%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL T T++ + KG A++E L + F T D ++ + I+ GEL ++ ++R IE
Sbjct: 38 IDKVLITDTIYKDARKGLRASEESLMRVFKTTDPRKVAEFIVRNGELPLTAEQRRRLIEQ 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +S CI+T T+ P +EA ++Q+ +++ K ++Q VI L++ +
Sbjct: 98 KRKQIIDWISRNCIDTRTRTPVPPQRVEAAMQQVDVAIDPFKPVEEQVNAVIKALQKVLP 157
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE---- 361
++ A +E+ A + K++ L + V+ E + G G L++ L P ++
Sbjct: 158 LKVAVS--ILEIRAPAEHAHKVRSTLSRMGRVVK-ERFEGDGSLVMQLEVPAGLQDTIIA 214
Query: 362 -IDELVRTETRGQGTLELLN 380
++EL T G G +++++
Sbjct: 215 KVNEL----THGSGDVKIIS 230
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
N I R +K G FEI + + R ID+VL T T++ + KG A++E L +
Sbjct: 5 NYVIARYEKDGYVFEILVDPDAALDMRLGKPVSIDKVLITDTIYKDARKGLRASEESLMR 64
Query: 75 AFNTEDQTEICKLIL 89
F T D ++ + I+
Sbjct: 65 VFKTTDPRKVAEFIV 79
>gi|340344302|ref|ZP_08667434.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519443|gb|EGP93166.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 225
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L ++T+ KG + E L KAF TED EI +++L KGEL ++ +R
Sbjct: 29 KKKDISSILIADEIYTDSGKGTKPSTEKLLKAFKTEDVIEIAEIMLKKGELNLTTDQRRK 88
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
++++ K I +++ ++ T P IE LK ++ KN ++Q +++ L+
Sbjct: 89 MLDDKRKQIVAFIAKTYVDPRTHLPHPPLRIEQALKDGRITIEPQKNVEEQVPDIVEKLR 148
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ + + + + A ++K ++ EEW G L L P R
Sbjct: 149 SIIALKSENLDLEITIPA---QYASQSYAVLKSVGVLKKEEWQNNGSLKAILEIPAGARP 205
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G T+E++
Sbjct: 206 NVIDRL-GSITKGSATVEVM 224
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
+ +VR G++FEI + + ++ +KDI +L ++T+ KG + E L KA
Sbjct: 1 MTVVRYSYEGEKFEILVKPDPALDYKMGKKKDISSILIADEIYTDSGKGTKPSTEKLLKA 60
Query: 76 FNTEDQTEICKLILMK 91
F TED EI +++L K
Sbjct: 61 FKTEDVIEIAEIMLKK 76
>gi|374633084|ref|ZP_09705451.1| rRNA metabolism protein, SBDS family [Metallosphaera
yellowstonensis MK1]
gi|373524568|gb|EHP69445.1| rRNA metabolism protein, SBDS family [Metallosphaera
yellowstonensis MK1]
Length = 232
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 109/198 (55%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I +++ + T++ +V KG A+ LKK F T D I + I++KGE+ ++ ++R +EN
Sbjct: 38 ISDIVVSDTIYKDVKKGLKASPSSLKKVFGTTDFEAISREIILKGEIPVTAEQRKEILEN 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P S +E L+Q +++NK+ + QAL++I L + +
Sbjct: 98 KRKQIIDFIHRNAVDPKTNLPIPPSRLEMALEQTKVQIDINKDIESQALQIIHELTKIIP 157
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + + VS K +++++L + +V+ W G L+ + I G +++ +
Sbjct: 158 IKIAKALLEIRVSQ--KYAGRVRQQL-QSLGNVKKSNWLADGTLIAEIEIPAGAQQDVID 214
Query: 365 LVRTETRGQGTLELLNLK 382
+ + T+G+ + ++ +K
Sbjct: 215 KLNSITKGEIEVRVIQVK 232
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ + + + G+RFEI + ++ R I +++ + T++ +V KG A+ LKK
Sbjct: 5 DYVVAKYESHGERFEILVKPKEAMALRQGKSISISDIVVSDTIYKDVKKGLKASPSSLKK 64
Query: 75 AFNTEDQTEICKLILMK 91
F T D I + I++K
Sbjct: 65 VFGTTDFEAISREIILK 81
>gi|329766298|ref|ZP_08257845.1| putative RNA-associated protein [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329137200|gb|EGG41489.1| putative RNA-associated protein [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 228
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KDI +L ++T+ KG + E L KAF TED EI +++L KG+L ++ +R
Sbjct: 32 KKKDISSILIADEIYTDSGKGTKPSTEKLLKAFKTEDVNEIAEIMLKKGDLNLTTDQRRK 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
++++ K I + +++ ++ T P IE +K ++ K+ +Q E++ L+
Sbjct: 92 MLDDKRKQIISFIAKTYVDPRTHLPHPPIRIEQAIKDGRITIEPQKSVDEQVPEIVDKLR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ + + + + A ++K S++ EEW G L L P R
Sbjct: 152 SIIALKSENLDLEITIPA---QYASQSYAVLKSVGSLKKEEWQNNGSLKAILEIPAGARP 208
Query: 362 --IDELVRTETRGQGTLELL 379
ID L + T+G T+E++
Sbjct: 209 NVIDRL-GSITKGSATVEVM 227
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
MT+V +VR G++FEI + + ++ +KDI +L ++T+ KG + E L
Sbjct: 1 MTDVTVVRYSYEGEKFEILVKPDPALDYKMGKKKDISSILIADEIYTDSGKGTKPSTEKL 60
Query: 73 KKAFNTEDQTEICKLILMK 91
KAF TED EI +++L K
Sbjct: 61 LKAFKTEDVNEIAEIMLKK 79
>gi|302348938|ref|YP_003816576.1| hypothetical protein ASAC_1140 [Acidilobus saccharovorans 345-15]
gi|302329350|gb|ADL19545.1| hypothetical protein ASAC_1140 [Acidilobus saccharovorans 345-15]
Length = 234
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I +VL + TV+ +V KG A+ E +KKAF T+D I + IL +G++QI+++ER IE
Sbjct: 39 ISDVLWSDTVYKDVRKGLKASPEAIKKAFGTDDINSIAERILKEGQIQITEEERRKIIEM 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I T ++ ++ ++ P IE +++ V+ + +QQALE I + +
Sbjct: 99 KRRQIITYIARNAVDPKSGSPIPEQRIENLFEELRIGVDPFRPVEQQALEAIKKMATVIP 158
Query: 306 IERAQMRVRVEVS---AG--VKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKY 359
I+ A+ V V + AG + +VK+L + V+ W G L + L I G
Sbjct: 159 IKIARALVEVTIPPEFAGRAIGEVKRLGD--------VKKTTWLDDGSLKVELEIPAGMQ 210
Query: 360 REIDELVRTETRGQGTL 376
E+ + ++ TRGQ +
Sbjct: 211 LEVIDKIQGLTRGQAQI 227
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 25 GKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEI 84
G+ FEI ++ ++ + I +VL + TV+ +V KG A+ E +KKAF T+D I
Sbjct: 16 GQHFEILVKPDEAFKFKEGEKVSISDVLWSDTVYKDVRKGLKASPEAIKKAFGTDDINSI 75
Query: 85 CKLIL 89
+ IL
Sbjct: 76 AERIL 80
>gi|385806378|ref|YP_005842776.1| hypothetical protein FFONT_1336 [Fervidicoccus fontis Kam940]
gi|383796241|gb|AFH43324.1| Shwachman-Bodian-Diamond syndrome protein [Fervidicoccus fontis
Kam940]
Length = 232
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 80/135 (59%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I+EV+++ ++ + KG A+ ED+K F TED + + IL GELQ++ ++R +E
Sbjct: 37 NIEEVVKSEFIYKDAKKGLKASPEDIKSVFGTEDFLAVAEKILKGGELQLTTEQRRKMLE 96
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
++ K I T +S I+ TK P IE +++ SVN+N++ ++QA+ ++ + + +
Sbjct: 97 SKRKMIITYISRNAIDPTTKLPIPPQRIEKAMEEARVSVNLNESVEKQAINIVKAIARQI 156
Query: 305 SIERAQMRVRVEVSA 319
I+ A+ + V + +
Sbjct: 157 PIKMAKALLEVNIPS 171
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I + + GK FEI V ++ + + +I+EV+++ ++ + KG A+ ED+K F
Sbjct: 8 IAKYESKGKHFEILVDPELVFEYKESGKPNIEEVVKSEFIYKDAKKGLKASPEDIKSVFG 67
Query: 78 TEDQTEICKLIL 89
TED + + IL
Sbjct: 68 TEDFLAVAEKIL 79
>gi|410671925|ref|YP_006924296.1| putative RNA-associated protein [Methanolobus psychrophilus R15]
gi|409171053|gb|AFV24928.1| putative RNA-associated protein [Methanolobus psychrophilus R15]
Length = 230
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 104/195 (53%), Gaps = 2/195 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I++++ +VF++ ++G ++ DL+ AF T D E+ + I++ GELQ++ ++R +E
Sbjct: 38 NIEDIVAVESVFSDANQGDHISESDLESAFGTTDVMEVARNIILHGELQLTKEQRKHMLE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
++ + I T++++ IN +T P + IE +++ +++ K+ +Q V+ ++ +
Sbjct: 98 DKTRQIVTVIAQNAINPQTMTPHPRNRIEKAMEEAKVHIDLYKSVDEQVNIVMKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I ++ + V+V A + K ++ K V+NE S G + + + G +
Sbjct: 158 PIRFEEINIAVKVPA--EYAAKSYGEISKFGVLVKNEWQSDGSWVAVIKMPAGMQNDFYG 215
Query: 365 LVRTETRGQGTLELL 379
LV T+G ++L
Sbjct: 216 LVNHLTKGDAETKIL 230
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 44/73 (60%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I R+KK +FE+ + +++R + +I++++ +VF++ ++G ++ DL+ AF
Sbjct: 9 IARLKKGKHQFEVFVDPDTALAFRRGEKINIEDIVAVESVFSDANQGDHISESDLESAFG 68
Query: 78 TEDQTEICKLILM 90
T D E+ + I++
Sbjct: 69 TTDVMEVARNIIL 81
>gi|374636054|ref|ZP_09707638.1| Ribosome maturation protein SBDS-like protein [Methanotorris
formicicus Mc-S-70]
gi|373560312|gb|EHP86579.1| Ribosome maturation protein SBDS-like protein [Methanotorris
formicicus Mc-S-70]
Length = 235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 89/172 (51%), Gaps = 3/172 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI E+L ++ + KG+ + ++ L K F T D EI K I++KG +Q++ ++R E
Sbjct: 38 DISEILAMEAIYKDSGKGEKSPEDTLLKVFGTTDVKEIAKQIILKGHVQLTSQQRKEMQE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I +++ + IN +T P IE L++ S+++ K ++Q +I L++ +
Sbjct: 98 QKKKQIISLIVKNTINPQTDTPHPPKRIEKALEEARVSIDIYKRPEEQLPRIIKELRKIL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I+ + + +++ A + ++ SV+ EEW G L++ + P
Sbjct: 158 PIKFEKRDIAIKIPA---EFAGNAYHILHQYGSVKQEEWQPDGSLIVVIEIP 206
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R + G++FEI ++ DI E+L ++ + KG+ + ++
Sbjct: 2 VSVDKAVIARYQSHGEKFEILVDPYLAAKFKEGQNIDISEILAMEAIYKDSGKGEKSPED 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T D EI K I++K
Sbjct: 62 TLLKVFGTTDVKEIAKQIILK 82
>gi|118576721|ref|YP_876464.1| exosome complex subunit [Cenarchaeum symbiosum A]
gi|118195242|gb|ABK78160.1| exosome complex subunit [Cenarchaeum symbiosum A]
Length = 228
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 102/199 (51%), Gaps = 6/199 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
R+KD+ VL + ++++ SKG E L+KAF T D +I ++IL+KG+ ++ +R
Sbjct: 32 RKKDLSSVLVSDEIYSDSSKGTKPPDEKLEKAFGTTDPAKIAEIILLKGDFNLTTDQRRR 91
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + I +++ ++ + P IE +K SV+ +K++ +QA ++ L+
Sbjct: 92 MVEEKRRQIIEYIAKTFVDPRSHLPHPPLRIEQAMKDGKVSVDPHKDAAEQAKGIVEKLR 151
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
++++ + + + + A ++K S+++EEW G L L P R
Sbjct: 152 GIIALKSENLDLEITIPA---QYAAQSYSVLKSVGSLKSEEWLQNGSLKAILEIPAAARP 208
Query: 362 --IDELVRTETRGQGTLEL 378
ID L + T+G T+E+
Sbjct: 209 GVIDRL-GSITKGTATVEV 226
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M + +V+ G +FEI + + ++ +KD+ VL + ++++ SKG E L
Sbjct: 1 MVDTTVVKFSHEGDKFEIIVKPDPALDYKLGRKKDLSSVLVSDEIYSDSSKGTKPPDEKL 60
Query: 73 KKAFNTEDQTEICKLILMK 91
+KAF T D +I ++IL+K
Sbjct: 61 EKAFGTTDPAKIAEIILLK 79
>gi|126459548|ref|YP_001055826.1| RNA-associated protein [Pyrobaculum calidifontis JCM 11548]
gi|126249269|gb|ABO08360.1| Shwachman-Bodian-Diamond syndrome protein [Pyrobaculum calidifontis
JCM 11548]
Length = 232
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL V+ + KG A+++ LKK F T D +I ++I+ +GE+ ++ ++R IE+
Sbjct: 37 IDKVLIHEEVYKDAKKGLRASEQALKKVFGTTDVRKIAEIIIKEGEIPLTAEQRRRLIED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ TK P +E L+Q S++ K +++Q E++ L++ +
Sbjct: 97 KRRQIVEWISRNCIDVRTKTPVPPQRVENALEQARVSIDPFKPAEEQVQEILKELQRILP 156
Query: 306 IERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A R+ + VS+ + VK L K+ K NE + G
Sbjct: 157 IKVATARMSLSVSSTYAQKVKGLVAKMAKIV----NERYKSDG 195
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
VA+ ++ + G+ FEI + + + ID+VL V+ + KG A+++ LKK
Sbjct: 5 VAVAKLDRQGEHFEILIDPDAALELKMGKPLGIDKVLIHEEVYKDAKKGLRASEQALKKV 64
Query: 76 FNTEDQTEICKLIL 89
F T D +I ++I+
Sbjct: 65 FGTTDVRKIAEIII 78
>gi|297527574|ref|YP_003669598.1| Ribosome maturation protein SBDS-like protein [Staphylothermus
hellenicus DSM 12710]
gi|297256490|gb|ADI32699.1| Ribosome maturation protein SBDS-like protein [Staphylothermus
hellenicus DSM 12710]
Length = 231
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 103/202 (50%), Gaps = 10/202 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+IDE+L V+ + KG A+ E L+ F T+D ++ I+ +GE+ ++ ++R IE
Sbjct: 36 NIDELLVGDYVYKDARKGLKASPESLRAVFGTDDIKKVALEIIKRGEIHLTAEQRRRIIE 95
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
N+ + I ++++ I+ +TK P IE ++Q S++ K+ K Q E++ + + +
Sbjct: 96 NKRRQIISLIARNAIDPKTKLPIPPKRIELAMEQARVSIDPFKSPKSQIEEIVSKIARII 155
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATS---VENEEWSGGGLLLICL-IDPGKYR 360
I+ A+ + V+V + K+ K +S ++ W G LL+ + I G
Sbjct: 156 PIKIAKAYIAVKVPP------QFSGKVYKVLSSIGEIKKSNWLNDGSLLVEIEIPAGMQE 209
Query: 361 EIDELVRTETRGQGTLELLNLK 382
E+ E + T G +++L ++
Sbjct: 210 ELIERINKVTHGSANIKVLYVR 231
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 375 TLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 434
LE++ E+ E+R IEN+ + I ++++ I+ +TK P IE ++Q S
Sbjct: 74 ALEIIKRGEIHLTAEQRRRIIENKRRQIISLIARNAIDPKTKLPIPPKRIELAMEQARVS 133
Query: 435 VNVNKNSKQQ 444
++ K+ K Q
Sbjct: 134 IDPFKSPKSQ 143
>gi|171185836|ref|YP_001794755.1| putative RNA-associated protein [Pyrobaculum neutrophilum V24Sta]
gi|170935048|gb|ACB40309.1| Shwachman-Bodian-Diamond syndrome protein [Pyrobaculum neutrophilum
V24Sta]
Length = 232
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 1/152 (0%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL ++ + KG A+++ LKKAF T D +I ++I+ +GE+ ++ ++R +E+
Sbjct: 37 IDKVLIHEEIYKDAKKGLRASEQSLKKAFGTTDVRKIAEIIIKEGEIPLTSEQRRKLVED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ TK P +E ++Q S++ K+ ++Q EV+ +++ +
Sbjct: 97 KKRQIVEWISRNCIDVRTKTPVPPQRVENAIEQARVSIDPFKSVEEQVQEVLKEIQRIIP 156
Query: 306 IERAQMRVRVEVSAG-VKDVKKLKEKLVKCAT 336
I+ A RV + VS+ + VK L K+ K +
Sbjct: 157 IKVATARVSLSVSSSHAQRVKGLVAKMAKIVS 188
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
VA+ ++ + G FEI + + + ID+VL ++ + KG A+++ LKKA
Sbjct: 5 VAVAKLDRGGDHFEILIDPDAALELKLGKPLGIDKVLIHEEIYKDAKKGLRASEQSLKKA 64
Query: 76 FNTEDQTEICKLIL 89
F T D +I ++I+
Sbjct: 65 FGTTDVRKIAEIII 78
>gi|327310391|ref|YP_004337288.1| putative RNA-associated protein [Thermoproteus uzoniensis 768-20]
gi|326946870|gb|AEA11976.1| putative RNA-associated protein [Thermoproteus uzoniensis 768-20]
Length = 231
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 125/277 (45%), Gaps = 48/277 (17%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
MT VAI ++ +AG+ FEI D D L+ T G++
Sbjct: 1 MTKVAIAKLDRAGEHFEILV--------------DPDAALELKT-------GKSIG---- 35
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
+D+VL ++ + KG A+++ LKKAF T D ++ +
Sbjct: 36 ---------------------LDKVLVHEEIYKDARKGLRASEQALKKAFGTTDVHKVAE 74
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
+I+ +GE+ I+ ++R +E++ + I +S CI+ TK P +E L+Q+ +++
Sbjct: 75 IIIREGEIPITAEQRRKMVEDKRRQIVEWISRNCIDVRTKTPVPPQRVENALEQVRAAID 134
Query: 285 VNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS 344
K ++Q ++ L++ + I+ A +R+ V VS+ + +K+K + K A V S
Sbjct: 135 PFKPVEEQINHILKELQRVLPIKVATVRIAVSVSS--QYAQKVKGFVGKSAKIVNERFRS 192
Query: 345 GGGLLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
G I G I V T G+G +++L +
Sbjct: 193 DGSWEAIVEAPAGLQDMIIGRVNDITHGEGDVKILEI 229
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
MT VAI ++ +AG+ FEI + + + +D+VL ++ + KG A+++ L
Sbjct: 1 MTKVAIAKLDRAGEHFEILVDPDAALELKTGKSIGLDKVLVHEEIYKDARKGLRASEQAL 60
Query: 73 KKAFNTEDQTEICKLIL 89
KKAF T D ++ ++I+
Sbjct: 61 KKAFGTTDVHKVAEIII 77
>gi|296809585|ref|XP_002845131.1| UPF0023 family protein [Arthroderma otae CBS 113480]
gi|238844614|gb|EEQ34276.1| UPF0023 family protein [Arthroderma otae CBS 113480]
Length = 344
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 76/163 (46%), Gaps = 47/163 (28%)
Query: 118 KRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTNMLNISS 177
KR+E+ACYKNK++ +R+ E
Sbjct: 6 KRYELACYKNKLLEYRSGAET--------------------------------------- 26
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTE-ICKLILMKGELQISD 236
D+D VLQ TVF +VS+G A +L K+F + +TE + + IL KGE+Q+ +
Sbjct: 27 -------DLDNVLQIPTVFLSVSRGHTAPTAELAKSFGKDYKTEDVIQEILRKGEVQVGE 79
Query: 237 KERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 279
KER ++ K++ IVS + ++ +KR +T MI L Q+
Sbjct: 80 KERRDILDRVEKEVLEIVSARLVDPVSKRVYTTGMIGKALDQL 122
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 26 KRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTE 83
KR+E+ACYKNK++ +R+ E D+D VLQ TVF +VS+G A +L K+F + +TE
Sbjct: 6 KRYELACYKNKLLEYRSGAETDLDNVLQIPTVFLSVSRGHTAPTAELAKSFGKDYKTE 63
>gi|48477698|ref|YP_023404.1| RNA-associated protein [Picrophilus torridus DSM 9790]
gi|48430346|gb|AAT43211.1| hypothetical protein PTO0626 [Picrophilus torridus DSM 9790]
Length = 230
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 107/211 (50%), Gaps = 6/211 (2%)
Query: 172 MLNISSLTSFREKDID--EVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 229
+++ +S+ R +ID + + +F + KG+ A +E LK+ F T D ++I I+ K
Sbjct: 22 LIDPASVDKIRSGNIDVEKDMALDEIFKDARKGERAGEESLKEVFKTTDVSQIAIEIVRK 81
Query: 230 GELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNS 289
GE+Q++ +R E + + I + + IN +T P IE +++ F V+ K++
Sbjct: 82 GEVQLTTDQRRKMTEEKKRQIINEIVRQAINPQTNTPIPAIRIEEAMEEAKFHVDPFKST 141
Query: 290 KQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG-L 348
++Q V+ ++ + I + R+ +++S +D K + K S+ EEWS G
Sbjct: 142 EEQVQAVLKAIRPLIPIRFEKTRLAIKMSG--EDYGKAYGDIAKVG-SIIKEEWSNSGDY 198
Query: 349 LLICLIDPGKYREIDELVRTETRGQGTLELL 379
+ I I G E+ +++ +RG +++L
Sbjct: 199 MCIIEIPAGMQGEVIDMINKRSRGNAEVKIL 229
>gi|325969206|ref|YP_004245398.1| ribosome maturation protein SBDS [Vulcanisaeta moutnovskia 768-28]
gi|323708409|gb|ADY01896.1| Ribosome maturation protein SBDS [Vulcanisaeta moutnovskia 768-28]
Length = 232
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 105/201 (52%), Gaps = 14/201 (6%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL T T++ + KG A++E L + F T D ++ + I+ GEL ++ +R IE
Sbjct: 38 IDKVLITDTIYKDARKGLRASEESLMRVFKTTDPRKVAEFIVKNGELPLTADQRKRLIEQ 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +S CI+T T+ P +E ++Q+ +++ K ++Q +I L++ +
Sbjct: 98 KRKQIIDWISRNCIDTRTRTPVPPQRVETAMQQVDVAIDPFKPIEEQVNAIIKALQKILP 157
Query: 306 IERAQMRVRV-EVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE--- 361
++ A V V EV A + K++ L + V+ E + G G L++ L P ++
Sbjct: 158 LKVA---VSVLEVRAPAEYAHKVRGTLSRMGRVVK-ERFEGDGSLVMQLEIPAGLQDTII 213
Query: 362 --IDELVRTETRGQGTLELLN 380
++EL T G G ++L++
Sbjct: 214 AKVNEL----THGSGDVKLMS 230
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
N I R +K G FEI + + R ID+VL T T++ + KG A++E L +
Sbjct: 5 NYVIARYEKDGYVFEILVDPDAALDMRLGKSIGIDKVLITDTIYKDARKGLRASEESLMR 64
Query: 75 AFNTEDQTEICKLIL 89
F T D ++ + I+
Sbjct: 65 VFKTTDPRKVAEFIV 79
>gi|297619734|ref|YP_003707839.1| Ribosome maturation protein SBDS-like protein [Methanococcus voltae
A3]
gi|297378711|gb|ADI36866.1| Ribosome maturation protein SBDS-like protein [Methanococcus voltae
A3]
Length = 234
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI ++L + ++ +++KG+ A E L K F T D +I + ILMKG++ ++ ++R E
Sbjct: 39 DISDILASEHIYKDIAKGEKAPDELLMKVFETLDGKKIAEKILMKGQVHLTAEQRKEMQE 98
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + + ++ IN +T P IE + + S+++ K++++Q +VI L+ +
Sbjct: 99 QKKKQVISFIARNTINPQTDTPHPPKRIENAMNEARVSIDLYKSAEEQVNDVIKKLRLIL 158
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
++ + V V++ G + L L + T ++ EEW G G L+ + P
Sbjct: 159 PMKFEKREVAVKL--GGEYAGTLYHSLAEYGT-IKKEEWMGDGSLVFVIEIP 207
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWR-NNIEKDIDEVLQTHTVFTNVSKGQAANKED 71
+ N + R++ G++FEI ++ N DI ++L + ++ +++KG+ A E
Sbjct: 4 LDNAVMARLQSHGEKFEIYVDPYLAAKYKENQSSADISDILASEHIYKDIAKGEKAPDEL 63
Query: 72 LKKAFNTEDQTEICKLILMK 91
L K F T D +I + ILMK
Sbjct: 64 LMKVFETLDGKKIAEKILMK 83
>gi|449018185|dbj|BAM81587.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 255
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 104/207 (50%), Gaps = 7/207 (3%)
Query: 176 SSLTSFRE---KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN-TEDQTEICKLILMKGE 231
++T +RE K +DEVL + VFT+ K A++ +LK F ++ E+ IL KG+
Sbjct: 23 GAVTKYREGTLKSLDEVLVSDVVFTDYHKRLRASELELKSVFGENYNKEEVLDKILRKGD 82
Query: 232 LQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQ 291
Q+S ER ++E + +I V + ++ +T P IE L+ + +++++++ +
Sbjct: 83 FQLSAAERRQKLEQKRNEIIEYVHKNFVDPKTHLPIPRMRIEQALETVRPRIDMDQSADR 142
Query: 292 QALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLI 351
Q ++ L CM +++ Q+ + V GV +++ +V E ++ G +L
Sbjct: 143 QVALMMSKLSACMPMKKHQVEGTLRVPHGVLGASN---AVIRSYCTVAREHYTSEGAVLE 199
Query: 352 CLIDPGKYREIDELVRTETRGQGTLEL 378
+I PG Y + + ++G L++
Sbjct: 200 IMISPGDYDAFIKALNNASKGNFHLDI 226
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M +VR + + FE+A + V +R K +DEVL + VFT+ K A++ +L
Sbjct: 1 MPQEMLVRYRSGKETFEVATHPGAVTKYREGTLKSLDEVLVSDVVFTDYHKRLRASELEL 60
Query: 73 KKAFN 77
K F
Sbjct: 61 KSVFG 65
>gi|397779935|ref|YP_006544408.1| Ribosome maturation protein SDO1 [Methanoculleus bourgensis MS2]
gi|396938437|emb|CCJ35692.1| Ribosome maturation protein SDO1 homolog [Methanoculleus bourgensis
MS2]
Length = 234
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ VF+N + G+ A E L K F T + I+ +GE+Q++ +R +
Sbjct: 36 EIDLEEVVAADFVFSNAAHGERAPDEALMKVFKTTEFEPAALRIIKRGEIQLTADQRRQR 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
I + + T +S IN ++ P IE +++ +++ K+ ++Q E + L+
Sbjct: 96 IAERRNQVITFISRNAINPQSGFPHPPQRIELAMEEARVNIDPFKSVEEQVKETVKALRP 155
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYRE 361
+ I ++R+ V + A D ++ A ++E EW G + + I G E
Sbjct: 156 LLPIRFEEIRIAVRIPA---DYAPRAYGELQAAVTIEQNEWQKDGSWIAVVRIPAGIQEE 212
Query: 362 IDELVRTETRGQGTLELLNLK 382
+LV +RG +L K
Sbjct: 213 FYDLVNKISRGNAETRILERK 233
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G+RFE+ + + R E D++EV+ VF+N + G+ A E
Sbjct: 2 IPLDQAVVARLESHGERFEVLVDPDLAVRIRQGEEIDLEEVVAADFVFSNAAHGERAPDE 61
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVI 130
L K F T + F P +R+ +++ +R IA +N+VI
Sbjct: 62 ALMKVFKTTE----------------FEPAA-LRIIKRGEIQLTADQRRQRIAERRNQVI 104
Query: 131 SW--RNNI 136
++ RN I
Sbjct: 105 TFISRNAI 112
>gi|49258441|pdb|1P9Q|C Chain C, Structure Of A Hypothetical Protein Af0491 From
Archaeoglobus Fulgidus
Length = 256
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 103/203 (50%), Gaps = 4/203 (1%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L +E + +++L VF + KG+ A+ ++L+K F T+D EI + I+++GE+QI+ +
Sbjct: 53 LKEGKEVNFEDLLAAEEVFKDAKKGERASVDELRKIFGTDDVFEIARKIILEGEVQITAE 112
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R +E + K I +S I+ T P S IE L++ +++ K+ + Q +++
Sbjct: 113 QRREMLEAKRKQIINFISRNTIDPRTNAPHPPSRIERALEEAKVHIDIFKSVEAQVKDIV 172
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDP 356
LK + ++ +M + +++ + + L V EEW G + + I
Sbjct: 173 KALKPILPLKFEEMEIAIKIPP--EHTGRAISALYNFG-GVTREEWQRDGSWICVMRIPS 229
Query: 357 GKYREIDELVRTETRGQGTLELL 379
G Y ++ +L+ +G+ ++L
Sbjct: 230 GMYGDLMDLLGKVAKGEALTKVL 252
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 46/88 (52%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
++ + + + I R++K G+ FE+ + E + +++L VF + K
Sbjct: 17 LYFQGHMVSLDKAVIARLRKGGEEFEVLVDPYLARDLKEGKEVNFEDLLAAEEVFKDAKK 76
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILMK 91
G+ A+ ++L+K F T+D EI + I+++
Sbjct: 77 GERASVDELRKIFGTDDVFEIARKIILE 104
>gi|352682026|ref|YP_004892550.1| exosome subunit [Thermoproteus tenax Kra 1]
gi|350274825|emb|CCC81471.1| exosome subunit [Thermoproteus tenax Kra 1]
Length = 232
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+D+VL ++ + KG A+++ LKK F T D +I ++I+ +GE+ I+ ++R IE
Sbjct: 37 LDKVLVHEEIYKDARKGLRASEQSLKKVFGTTDVRKIAEIIIKEGEIPITAEQRRRMIEE 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +S CI+ TK P +E L+Q+ +++ K ++Q ++ L++ +
Sbjct: 97 KRKQIVEWISRNCIDVRTKTPVPPQRVENALEQVRAAIDPFKPVEEQIQHILKDLQRVLP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A +R+ + + A V+K++ + K A V NE + G
Sbjct: 157 IKVATVRIALSIPAAY--VQKVRGLMSKSAKVV-NERFRSDG 195
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 13 MTN-VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKED 71
MTN VAI ++ + G+ FEI + + + +D+VL ++ + KG A+++
Sbjct: 1 MTNKVAIAKLDRGGEHFEILIDPDAALELKTGKSIGLDKVLVHEEIYKDARKGLRASEQS 60
Query: 72 LKKAFNTEDQTEICKLIL 89
LKK F T D +I ++I+
Sbjct: 61 LKKVFGTTDVRKIAEIII 78
>gi|258569399|ref|XP_002543503.1| hypothetical protein UREG_03019 [Uncinocarpus reesii 1704]
gi|237903773|gb|EEP78174.1| hypothetical protein UREG_03019 [Uncinocarpus reesii 1704]
Length = 330
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 130/332 (39%), Gaps = 121/332 (36%)
Query: 150 FTNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKED 209
FTNVS + LKK + T E D+D VLQ TVF +VSK Q A D
Sbjct: 14 FTNVSIVR------LKKEYRTGA----------EADLDNVLQVPTVFLSVSKAQTAPAAD 57
Query: 210 LKKAFNTEDQTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFT 268
L K+F + + E I + IL KGE+Q+ +KER +E +++ IVS + ++ +KR +T
Sbjct: 58 LAKSFGSNAKREDIVQEILRKGEVQVGEKERKELLERVEREVLEIVSARLVDPVSKRVYT 117
Query: 269 VSMIEAGLKQIHFS---------------------------------------------V 283
MI L Q+ + V
Sbjct: 118 TGMISKALDQLSAAGGQQGGKPKPGGESPAEAPLRSESGTPVPASEELSSQRKKPLWTGV 177
Query: 284 NVNKNSKQQALEVIPTL--KQCMSIERAQMRVRVEVS----------------------- 318
K++K QAL+ + L Q + + RA+MR+R+
Sbjct: 178 VTTKSAKSQALDAMKALIAWQPVPVMRARMRLRITCPTSILKQAARSTTNPASGAQKNSK 237
Query: 319 -------------------AGVKDVK----KLKEKLVKCATSVENE------EWSGGGLL 349
G +D +K++++ VE++ EW
Sbjct: 238 GKGKKGKKADDSDEEAREIGGTQDTATGTGTVKDRILHYFEQVESQEILGQDEWE----- 292
Query: 350 LICLIDPGKYREIDELVRTETRGQGTLELLNL 381
+I +PG ++ + E V ET+G+G +E+L++
Sbjct: 293 VIGFAEPGAFKGLSEFVGGETKGRGRVEVLDM 324
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 47/86 (54%), Gaps = 16/86 (18%)
Query: 7 PTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQA 66
P+NQI+ TNV+IVR+KK +R E D+D VLQ TVF +VSK Q
Sbjct: 8 PSNQIKFTNVSIVRLKK---------------EYRTGAEADLDNVLQVPTVFLSVSKAQT 52
Query: 67 ANKEDLKKAFNTEDQTE-ICKLILMK 91
A DL K+F + + E I + IL K
Sbjct: 53 APAADLAKSFGSNAKREDIVQEILRK 78
>gi|347524279|ref|YP_004781849.1| ribosome maturation protein SBDS [Pyrolobus fumarii 1A]
gi|343461161|gb|AEM39597.1| Ribosome maturation protein SBDS [Pyrolobus fumarii 1A]
Length = 235
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 115/219 (52%), Gaps = 17/219 (7%)
Query: 172 MLNISSLTSFREK---DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILM 228
++N + RE D DE+L V+ +V + A+ E+LKK F T+D +I I+
Sbjct: 24 LVNPDAAMRLREGKQVDPDELLVGDYVYRDVRRALKASPEELKKVFGTDDVKKIAVEIVK 83
Query: 229 KGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKN 288
+GE+Q++ ++R IE + + I +++ I+ TK P IEA +++ V+ K
Sbjct: 84 RGEIQMTTEQRRRLIEQKKRQIIMFIAKNAIDPRTKLPVPPQRIEAAMEEAGVGVDPFKP 143
Query: 289 SKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVK---DVKKLKEKLVKCATSVENEEW 343
++QA+++I L++ + I RA +++ V + ++++L E V++ +W
Sbjct: 144 VEEQAMQIIKALQRVLPLKIARALLKIVVPPEFAPRVYGELQRLGE--------VKSTDW 195
Query: 344 SGGGLLLICL-IDPGKYREIDELVRTETRGQGTLELLNL 381
G L+ L I G +E+ + + TRGQ +++L++
Sbjct: 196 RTDGSLVAELEIPAGMQQEVIDRLNKLTRGQVEVKILSV 234
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I R++ GK+FE+ + + R + D DE+L V+ +V + A+ E+LKK F
Sbjct: 11 IARLEVGGKKFEVLVNPDAAMRLREGKQVDPDELLVGDYVYRDVRRALKASPEELKKVFG 70
Query: 78 TEDQTEIC 85
T+D +I
Sbjct: 71 TDDVKKIA 78
>gi|11498102|ref|NP_069327.1| RNA-associated protein [Archaeoglobus fulgidus DSM 4304]
gi|6647937|sp|O29759.1|SDO1_ARCFU RecName: Full=Ribosome maturation protein SDO1 homolog
gi|2650135|gb|AAB90746.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 234
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 103/204 (50%), Gaps = 4/204 (1%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L +E + +++L VF + KG+ A+ ++L+K F T+D EI + I+++GE+QI+ +
Sbjct: 31 LKEGKEVNFEDLLAAEEVFKDAKKGERASVDELRKIFGTDDVFEIARKIILEGEVQITAE 90
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R +E + K I +S I+ T P S IE L++ +++ K+ + Q +++
Sbjct: 91 QRREMLEAKRKQIINFISRNTIDPRTNAPHPPSRIERALEEAKVHIDIFKSVEAQVKDIV 150
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDP 356
LK + ++ +M + +++ + + L V EEW G + + I
Sbjct: 151 KALKPILPLKFEEMEIAIKIPP--EHTGRAISALYNFG-GVTREEWQRDGSWICVMRIPS 207
Query: 357 GKYREIDELVRTETRGQGTLELLN 380
G Y ++ +L+ +G+ ++L
Sbjct: 208 GMYGDLMDLLGKVAKGEALTKVLR 231
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R++K G+ FE+ + E + +++L VF + KG+ A+ +
Sbjct: 2 VSLDKAVIARLRKGGEEFEVLVDPYLARDLKEGKEVNFEDLLAAEEVFKDAKKGERASVD 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+L+K F T+D EI + I+++
Sbjct: 62 ELRKIFGTDDVFEIARKIILE 82
>gi|440801500|gb|ELR22518.1| rRNA metabolism protein, SBDS family [Acanthamoeba castellanii str.
Neff]
Length = 268
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 10/203 (4%)
Query: 181 FREKDI--DEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKE 238
FRE + VL ++TN SKG+ A + DL KAF T + + K+++ KGELQ++ E
Sbjct: 30 FREGKLGFSNVLFADEIYTNHSKGERAKEADLLKAFGTSNIEDCAKVVVEKGELQLTAAE 89
Query: 239 RSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE-VI 297
R ++ + ++ + + I+ TK P V IE +Q+ +V+ + +++Q E V+
Sbjct: 90 RREKVNKRKAEMINYIHKYYIDPRTKTPHPVVRIENAFEQMKVNVDPDVPAERQVQEKVL 149
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKL--VKCATSVENEEWSGGGLLLICLID 355
L + + I+R++M + + K + + + VK V E +S G + I
Sbjct: 150 KKLPEILPIKRSEMSGTLSIP-----TKVIGQAMGTVKKYAQVSGENYSSGAATMQVSIV 204
Query: 356 PGKYREIDELVRTETRGQGTLEL 378
PG Y +R T+G+ T ++
Sbjct: 205 PGDYDAFMTDLRNVTKGEFTFDV 227
>gi|322371730|ref|ZP_08046273.1| Ribosome maturation protein SBDS-like protein [Haladaptatus
paucihalophilus DX253]
gi|320548615|gb|EFW90286.1| Ribosome maturation protein SBDS-like protein [Haladaptatus
paucihalophilus DX253]
Length = 241
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 91/194 (46%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ DI++V+ VF N S+G +EDL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 DGDIEDVIAAEDVFENASRGDRPAEEDLETVFETTDPLEIIPEVVERGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L+Q FSV+ + QQ + + L+
Sbjct: 97 QEQKHKQLVNRITRNAVNPQMDNAPHPPERIENALEQAGFSVDPMEPVDQQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V+V A + + ++ +E EEW G + + P G
Sbjct: 157 PVIPIRFDEVTIAVQVPANYAGSAQAR---IRQFGDLEREEWQNDGSWVGVMTFPAGMQN 213
Query: 361 EIDELVRTETRGQG 374
E +LV T G+
Sbjct: 214 EFYDLVNEHTSGEA 227
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + + DI++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAMKRGDFDGDIEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFETTDPLEIIPEVV 81
>gi|296109189|ref|YP_003616138.1| ribosome maturation protein SBDS-like protein [methanocaldococcus
infernus ME]
gi|295434003|gb|ADG13174.1| Ribosome maturation protein SBDS-like protein [Methanocaldococcus
infernus ME]
Length = 235
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 3/181 (1%)
Query: 176 SSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQIS 235
+ L +E D DE+L T VF + +KG+ A +E L K F T D EI K I++KG +Q++
Sbjct: 29 AKLKEGQEVDFDELLATDVVFKDANKGEKAPEELLIKVFGTTDIKEIAKKIIIKGHVQLT 88
Query: 236 DKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 295
K+R E + + I TI+ IN +T P IE L+++ ++++ +++++Q E
Sbjct: 89 AKQREEIKEQKKRQIITIICRNTINPQTDTPHPPHRIEKALEELKINIDIYRSAEEQVPE 148
Query: 296 VIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLID 355
++ LK+ + I + + V++ + K L K +V+ EEW+ G L++ +
Sbjct: 149 IVKKLKRLLPIRFEKRDIAVKIPP--EYASKAYSFLYKFG-AVKQEEWASDGSLIVLIEI 205
Query: 356 P 356
P
Sbjct: 206 P 206
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R G++FEI + E D DE+L T VF + +KG+ A +E
Sbjct: 2 VSLEEAVIARYTSHGEKFEILVDPYLAAKLKEGQEVDFDELLATDVVFKDANKGEKAPEE 61
Query: 71 DLKKAFNTED 80
L K F T D
Sbjct: 62 LLIKVFGTTD 71
>gi|18313180|ref|NP_559847.1| putative RNA-associated protein [Pyrobaculum aerophilum str. IM2]
gi|18160694|gb|AAL64029.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 232
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL ++ + KG A+++ LKK F T D +I ++I+ +GE+ ++ ++R IE+
Sbjct: 37 IDKVLVHEEIYKDAKKGLRASEQALKKVFGTTDVRKIAEIIIKEGEIPLTAEQRRKLIED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ TK P +E L+Q S++ K+ ++Q EV+ +++ +
Sbjct: 97 KKRQIVEWISRNCIDVRTKTPVPPQRVENALEQARVSIDPFKSVEEQVQEVLKEIQRIIP 156
Query: 306 IERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A RV + VS+ + VK L K+ K NE + G
Sbjct: 157 IKVATARVALAVSSTYAQRVKGLVAKMAKIV----NERYKSDG 195
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
VA+ ++ K G+ FEI + + + ID+VL ++ + KG A+++ LKK
Sbjct: 5 VAVAKLDKGGEHFEILIDPDAALELKMGKPLGIDKVLVHEEIYKDAKKGLRASEQALKKV 64
Query: 76 FNTEDQTEICKLIL 89
F T D +I ++I+
Sbjct: 65 FGTTDVRKIAEIII 78
>gi|126465756|ref|YP_001040865.1| RNA-associated protein [Staphylothermus marinus F1]
gi|126014579|gb|ABN69957.1| Shwachman-Bodian-Diamond syndrome proteins [Staphylothermus marinus
F1]
Length = 231
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+IDE+L V+ + KG A+ E LK F T+D ++ I+ +GE+ ++ ++R IE
Sbjct: 36 NIDELLVGDYVYKDARKGLKASPESLKAVFGTDDIKKVALEIIKRGEIHLTAEQRRKIIE 95
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
N+ + I ++++ I+ +TK P IE ++Q S++ K+ + Q E++ + + +
Sbjct: 96 NKRRQIISLIARNAIDPKTKLPIPPKRIELAMEQARVSIDPFKSPESQVEEIVSKIARII 155
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATS---VENEEW-SGGGLLLICLIDPGKYR 360
I+ A+ + V+V + K K +S ++ W S G LL+ I G
Sbjct: 156 PIKIAKAYIAVKVPP------QFSGKAYKVLSSIGEIKKSNWLSDGSLLVEIEIPAGMQE 209
Query: 361 EIDELVRTETRGQGTLELLNLK 382
E E + T G +++L ++
Sbjct: 210 EFIERINKLTHGSANIKVLYVR 231
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I R + G RFEI + + + +IDE+L V+ + KG A+ E LK F
Sbjct: 7 IARYEAKGHRFEILVNPDLALKVKEGKTVNIDELLVGDYVYKDARKGLKASPESLKAVFG 66
Query: 78 TED 80
T+D
Sbjct: 67 TDD 69
>gi|145592132|ref|YP_001154134.1| RNA-associated protein [Pyrobaculum arsenaticum DSM 13514]
gi|379003150|ref|YP_005258822.1| rRNA metabolism protein, SBDS family [Pyrobaculum oguniense TE7]
gi|145283900|gb|ABP51482.1| Shwachman-Bodian-Diamond syndrome protein [Pyrobaculum arsenaticum
DSM 13514]
gi|375158603|gb|AFA38215.1| rRNA metabolism protein, SBDS family [Pyrobaculum oguniense TE7]
Length = 232
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 89/162 (54%), Gaps = 3/162 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID++L +F + KG A+++ LK+ F T D +I ++I+ +GE+ ++ ++R IE+
Sbjct: 37 IDKILIHEEIFKDAKKGLRASEQALKRIFGTTDVRKIAEIIIKEGEIPLTAEQRRRLIED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ TK P +E L Q+ S++ K ++Q E++ +++ +
Sbjct: 97 KKRQIVEWISRNCIDVRTKTPVPPQRVENALDQVRVSIDPFKPPEEQVQEILKEIQRVLP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A R+ + VS+ +K+K + K A V NE + G
Sbjct: 157 IKVATARIALSVSS--THAQKVKGIVAKMAKIV-NERYKSDG 195
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 17 AIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 76
A+ ++ K G+ FEI + + ++ ID++L +F + KG A+++ LK+ F
Sbjct: 6 AVAKLDKGGEHFEILIDPDAALEFKMGKPMGIDKILIHEEIFKDAKKGLRASEQALKRIF 65
Query: 77 NTEDQTEICKLIL 89
T D +I ++I+
Sbjct: 66 GTTDVRKIAEIII 78
>gi|150400618|ref|YP_001324384.1| RNA-associated protein [Methanococcus aeolicus Nankai-3]
gi|150013321|gb|ABR55772.1| Shwachman-Bodian-Diamond syndrome protein [Methanococcus aeolicus
Nankai-3]
Length = 233
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI E+L + ++ + KG+ E L+K F T D+ E+ K I++KG +Q++ ++R E
Sbjct: 38 DISEILASEDIYKDSGKGEKVPDELLEKIFGTTDKKEVAKKIVLKGTVQLTSQQRKEMKE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I ++++ IN +T P + IE +++I ++++ K++++Q ++I +++ +
Sbjct: 98 QKRKQIISLIARNTINPQTDTPHPPNRIEKVMEEIRANIDIYKSAEEQIPDIIKDIRRLI 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI 362
I E+ + VR+ V +++ EEW G L+ + EI
Sbjct: 158 PIKFEKRDLAVRIPAEYSTTAYHS-----VSNYGTIKKEEWQSDGSLVFVI-------EI 205
Query: 363 DELVRTETRGQGTLELLNLKEVTEG 387
+ TE G +L ++T+G
Sbjct: 206 PSGIETEFYG-------HLNKITKG 223
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R++ G++FE+ ++ + DI E+L + ++ + KG+ E
Sbjct: 2 VPLEKAVIARLQSHGEKFEVLVDPYLSAKFKEGQKLDISEILASEDIYKDSGKGEKVPDE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L+K F T D+ E+ K I++K
Sbjct: 62 LLEKIFGTTDKKEVAKKIVLK 82
>gi|386002840|ref|YP_005921139.1| hypothetical protein Mhar_2164 [Methanosaeta harundinacea 6Ac]
gi|357210896|gb|AET65516.1| Shwachman-Bodian-Diamond syndrome protein [Methanosaeta
harundinacea 6Ac]
Length = 232
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D++++L VF N +G +++EDL +AF T D I IL KGE+Q++ +R IE
Sbjct: 38 DLEKILAAEDVFENAGRGDRSSEEDLLRAFETTDVLTIAAKILKKGEIQLTADQRKKIIE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
N+ + + +++ IN +T P + IE +++ HF+V+ K+ ++ + ++ +
Sbjct: 98 NKRRQVVHVIATNAINPQTGTPHPPARIERAMEEAHFNVDPTKSVEEMVNLAMKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
I ++ V V++ K E + ++ E+W + G + + + G E
Sbjct: 158 PIRFEEVDVAVKIPPAYAP-KAYGE--IASFGKLQREQWQNDGSWIGVVRLPAGLQNEFY 214
Query: 364 ELVRTETRGQGTLELL 379
LV ++G +LL
Sbjct: 215 GLVNRLSKGDAETKLL 230
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 20 RMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 79
R+K G FE+ +++R + D++++L VF N +G +++EDL +AF T
Sbjct: 11 RLKTHGTVFEVLVDPEGALAYRQGDDLDLEKILAAEDVFENAGRGDRSSEEDLLRAFETT 70
Query: 80 DQTEICKLILMK 91
D I IL K
Sbjct: 71 DVLTIAAKILKK 82
>gi|296243062|ref|YP_003650549.1| ribosome maturation protein SBDS [Thermosphaera aggregans DSM
11486]
gi|296095646|gb|ADG91597.1| Ribosome maturation protein SBDS [Thermosphaera aggregans DSM
11486]
Length = 233
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 101/199 (50%), Gaps = 4/199 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+DEV+ ++ + KG A+ E LK F T+D + I+ KGELQ + ++R +E+
Sbjct: 37 VDEVVAGDFIYKDARKGLKASPESLKAVFGTDDPRVVAMEIIKKGELQFTAEQRRKLLED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ I ++++ ++ +TK P IE ++Q +++ K ++QQ E++ + + +
Sbjct: 97 KKNQIVNLIAKNAVDPKTKLPIPAKRIELAMEQARVTIDPYKPAEQQVEEIVSKIARFIP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ V V++ A + K V+ V+ W G + + L I G +E +
Sbjct: 157 IKLAKAYVLVKIPA---EYASKAYKTVQSLGVVKKSNWGSDGSVSVELEIPAGMQQEFID 213
Query: 365 LVRTETRGQGTLELLNLKE 383
V T+G ++++++ E
Sbjct: 214 KVNALTKGSAEIKIVSVGE 232
>gi|374325950|ref|YP_005084150.1| hypothetical protein P186_0444 [Pyrobaculum sp. 1860]
gi|356641219|gb|AET31898.1| Shwachman-Bodian-Diamond syndrome protein [Pyrobaculum sp. 1860]
Length = 232
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID+VL ++ + KG A+++ L+K F T D +I ++I+ +GE+ ++ ++R IE+
Sbjct: 37 IDKVLVHEEIYKDAKKGLRASEQALRKVFGTSDVRKIAEIIIKEGEIPLTAEQRRKLIED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ TK P +E L+Q S++ K++++Q E++ +++ +
Sbjct: 97 KKRQIIEWISRNCIDVRTKTPVPPQRVENALEQARVSIDPFKSAEEQVQEILKEIQRIIP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A R+ + +S+ +K+K + K A V NE + G
Sbjct: 157 IKIATARIALSISSAY--AQKVKGLVAKMARIV-NERYRSDG 195
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
VA+ +++K G+ FEI + + + ID+VL ++ + KG A+++ L+K
Sbjct: 5 VAVAKLEKGGEHFEILIDPDAALELKMGKPLGIDKVLVHEEIYKDAKKGLRASEQALRKV 64
Query: 76 FNTEDQTEICKLIL 89
F T D +I ++I+
Sbjct: 65 FGTSDVRKIAEIII 78
>gi|15897638|ref|NP_342243.1| RNA-associated protein [Sulfolobus solfataricus P2]
gi|284174964|ref|ZP_06388933.1| putative RNA-associated protein [Sulfolobus solfataricus 98/2]
gi|384434253|ref|YP_005643611.1| Ribosome maturation protein SBDS-like protein [Sulfolobus
solfataricus 98/2]
gi|6015739|emb|CAB57566.1| proteasome alpha subunit (C-terminus) [Sulfolobus solfataricus P2]
gi|13813905|gb|AAK41033.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261602407|gb|ACX92010.1| Ribosome maturation protein SBDS-like protein [Sulfolobus
solfataricus 98/2]
Length = 233
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D I K IL+KGEL ++ ++R +E
Sbjct: 39 LSDVVVSDTIYKDVKKGLKASPASLKKVFGTTDFETIVKEILLKGELPVTAEQRKEMLET 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P + +E ++Q +++NK+ + QA++++ + + +
Sbjct: 99 KRKQIIDFIHRNAVDPKTNLPIPPTRLEMAMEQARIQIDLNKDVEAQAMQIVKEISKIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + ++V + K+K +L V+ W G LL L I G +++ +
Sbjct: 159 IKIARALLSIKVPSEYSS--KVKSQLHNLG-EVKKANWLEDGTLLAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ + T+G+ +++L ++
Sbjct: 216 KLNSLTKGEVEVKVLQVR 233
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ IV+ + G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 6 DYVIVKYESHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKK 65
Query: 75 AFNTEDQTEICKLILMK 91
F T D I K IL+K
Sbjct: 66 VFGTTDFETIVKEILLK 82
>gi|298674554|ref|YP_003726304.1| ribosome maturation protein SBDS-like protein [Methanohalobium
evestigatum Z-7303]
gi|298287542|gb|ADI73508.1| Ribosome maturation protein SBDS-like protein [Methanohalobium
evestigatum Z-7303]
Length = 230
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 104/198 (52%), Gaps = 8/198 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I++++ +VF + +KG A++ D+++ F T++ EI I+ G++Q++ ++R ++
Sbjct: 38 NIEDIIAVESVFEDANKGNLASESDIQEIFGTDEVYEIIYNIIKHGDIQLTKEQRKRMLD 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + I+++ IN +TK P S IE+ +++ ++++ K+ +Q + ++ +
Sbjct: 98 EKRKQVVNIIAQNAINPQTKTPHPPSRIESAMEEAKVNIDLLKSVDEQVNTALKAIRPII 157
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYRE 361
I E Q+ V++ S K ++ +VE EEW + G + + I G +
Sbjct: 158 PIRFEEVQVAVKIPASYAAKSYGEISR-----FGTVEKEEWQNDGSWVAVVRIPAGLQND 212
Query: 362 IDELVRTETRGQGTLELL 379
L+ T+G+ +LL
Sbjct: 213 FYSLINRLTKGEAESKLL 230
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 45/79 (56%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + I R KK GK+FE+ + + + + +I++++ +VF + +KG A++
Sbjct: 2 ISLDDSVIARYKKGGKQFEVFVDPDGALDIKRGEDINIEDIIAVESVFEDANKGNLASES 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
D+++ F T++ EI I+
Sbjct: 62 DIQEIFGTDEVYEIIYNII 80
>gi|126179621|ref|YP_001047586.1| RNA-associated protein [Methanoculleus marisnigri JR1]
gi|125862415|gb|ABN57604.1| Shwachman-Bodian-Diamond syndrome protein [Methanoculleus
marisnigri JR1]
Length = 233
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D++EV+ ++F+N + + A++E L K F T + E I+ KGE+ ++ ++R I
Sbjct: 38 DLEEVVAADSIFSNAAHAERASEEALLKVFKTTEFEEAALRIIRKGEIHLTSEQRRHLIA 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + T ++ +N ++ P IE +++ S++ K+ ++Q EV+ L+ +
Sbjct: 98 EKRNRVVTFIARNAVNPQSGFPHPPQRIELAMEEARVSIDPFKSVEEQVKEVVKALRPLL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYREID 363
I ++R+ V++ A + + A S+E EEW G + + I G E
Sbjct: 158 PIRFEEIRIAVKIPADY----AARAYEITTAGSLEREEWQKDGSWIAVVKIPAGIQEEFY 213
Query: 364 ELVRTETRG 372
+LV ++G
Sbjct: 214 DLVNKVSKG 222
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + R++ G+RFE+ N + R + D++EV+ ++F+N + + A++E
Sbjct: 2 IPLDQAVVARLESYGERFEVLVDPNLAMRIRQGEDVDLEEVVAADSIFSNAAHAERASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T + E I+ K
Sbjct: 62 ALLKVFKTTEFEEAALRIIRK 82
>gi|448495572|ref|ZP_21610031.1| RNA-associated protein [Halorubrum californiensis DSM 19288]
gi|445688098|gb|ELZ40370.1| RNA-associated protein [Halorubrum californiensis DSM 19288]
Length = 241
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ VF N S+G +EDL+ F+T D EI ++ +GE+QI+ ++R+
Sbjct: 37 EGDLEEVIAAEDVFENASRGDRPAEEDLETVFDTTDPLEIIPEVVERGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ + V++ A D + ++ +E EEW + GG + + G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGGWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
++ +LV T G+G ++ K+
Sbjct: 214 DLYDLVNEVTSGEGDARVIKDKD 236
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F+T D EI ++ +
Sbjct: 62 EDLETVFDTTDPLEIIPEVVER 83
>gi|396081963|gb|AFN83577.1| putative exosome subunit [Encephalitozoon romaleae SJ-2008]
Length = 223
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 50/69 (72%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP NQ ++ NV+IV +KK G+R+E+ Y NK+ +RN + ++E+L T T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVALKKFGRRYELGVYPNKLYEYRNGMATPLNEILLTDTIYRSVSK 60
Query: 64 GQAANKEDL 72
G+ A ++DL
Sbjct: 61 GEIAGQDDL 69
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 50/69 (72%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP NQ ++ NV+IV +KK G+R+E+ Y NK+ +RN + ++E+L T T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVALKKFGRRYELGVYPNKLYEYRNGMATPLNEILLTDTIYRSVSK 60
Query: 156 GQAANKEDL 164
G+ A ++DL
Sbjct: 61 GEIAGQDDL 69
>gi|401827494|ref|XP_003887839.1| putative exosome subunit [Encephalitozoon hellem ATCC 50504]
gi|392998846|gb|AFM98858.1| putative exosome subunit [Encephalitozoon hellem ATCC 50504]
Length = 223
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 53/228 (23%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP NQ ++ NV+IV +KK G+R+E+ Y NK+ +RN + ++E+L T TV+ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVALKKFGRRYELGVYPNKLYEYRNGMATPLNEILLTDTVYRSVSK 60
Query: 156 GQAANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 215
G+ A + DL+
Sbjct: 61 GEIAGQGDLE------------------------------------------------LF 72
Query: 216 TEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAG 275
+ EI + IL G Q S+ R + E ++I I+ K T+ R + +
Sbjct: 73 CKPHEEIVREILDNGHEQKSEATRIYEQEKTEREIIEILRNKV--TKEGRHLNEASLREA 130
Query: 276 LKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKD 323
+ ++H ++ + NSK+Q+ EV+ L++ M +R ++V V+++ V D
Sbjct: 131 INKVH-NIYIG-NSKKQSQEVLAKLEK-MGFDRVGIKVSVDMNGKVTD 175
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP NQ ++ NV+IV +KK G+R+E+ Y NK+ +RN + ++E+L T TV+ +VSK
Sbjct: 1 MFTPLNQKKLVNVSIVALKKFGRRYELGVYPNKLYEYRNGMATPLNEILLTDTVYRSVSK 60
Query: 64 GQAANKEDL 72
G+ A + DL
Sbjct: 61 GEIAGQGDL 69
>gi|50513721|pdb|1T95|A Chain A, Crystal Structure Of The Shwachman-Bodian-Diamond Syndrome
Protein Orthologue From Archaeoglobus Fulgidus
Length = 240
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 102/205 (49%), Gaps = 8/205 (3%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L +E + +++L VF + KG+ A+ ++L+K F T+D EI + I+++GE+QI+ +
Sbjct: 37 LKEGKEVNFEDLLAAEEVFKDAKKGERASVDELRKIFGTDDVFEIARKIILEGEVQITAE 96
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R +E + K I +S I+ T P S IE L++ +++ K+ + Q +++
Sbjct: 97 QRREXLEAKRKQIINFISRNTIDPRTNAPHPPSRIERALEEAKVHIDIFKSVEAQVKDIV 156
Query: 298 PTLKQCMSI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLI 354
LK + + E ++ +++ + + L V EEW G + + I
Sbjct: 157 KALKPILPLKFEEXEIAIKIPPEHTGRAISALYN-----FGGVTREEWQRDGSWICVXRI 211
Query: 355 DPGKYREIDELVRTETRGQGTLELL 379
G Y ++ +L+ +G+ ++L
Sbjct: 212 PSGXYGDLXDLLGKVAKGEALTKVL 236
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 42/80 (52%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R++K G+ FE+ + E + +++L VF + KG+ A+ +
Sbjct: 8 VSLDKAVIARLRKGGEEFEVLVDPYLARDLKEGKEVNFEDLLAAEEVFKDAKKGERASVD 67
Query: 71 DLKKAFNTEDQTEICKLILM 90
+L+K F T+D EI + I++
Sbjct: 68 ELRKIFGTDDVFEIARKIIL 87
>gi|40217444|emb|CAE46377.1| conserved hypothetical protein [uncultured archaeon]
gi|268323827|emb|CBH37415.1| conserved hypothetical protein, UPF0023 family [uncultured
archaeon]
Length = 230
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++ L +FT+VSKG+ A DL AF+T D EI + I+ +GE+Q++ +R ++E
Sbjct: 38 EVEPALAADEIFTDVSKGEKATDGDLMTAFSTTDVVEIAERIIKEGEVQLTAAQRRKKVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ IN +TK P T + IE + + ++ K+ + E + ++ +
Sbjct: 98 EKRKMVIDQIARISINPQTKTPHTPTRIEIAMTEAKVHIDPFKSVYELVSETVKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ + + +++ A ++ E +K SV EEW G G + + P R DE
Sbjct: 158 PIKIEESEIAIKIPAAY--TGRVYE--LKGNYSVIKEEWQGDGSFVAVVKIPAGMR--DE 211
Query: 365 L 365
L
Sbjct: 212 L 212
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R + K FE R+ + +++ L +FT+VSKG+ A
Sbjct: 2 VSLDKAVVARYRHGKKNFETLVDPELAYRIRSEGKGEVEPALAADEIFTDVSKGEKATDG 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL AF+T D EI + I+
Sbjct: 62 DLMTAFSTTDVVEIAERII 80
>gi|448456198|ref|ZP_21595011.1| RNA-associated protein [Halorubrum lipolyticum DSM 21995]
gi|445812697|gb|EMA62687.1| RNA-associated protein [Halorubrum lipolyticum DSM 21995]
Length = 241
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G +EDL+ F T D EI I+ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAEEDLETVFGTTDPLEIIPEIVERGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + T ++ +N + P IE L++ F V+ + + Q + + L+
Sbjct: 97 MERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQVDPMEPVENQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
++ +LV T G+G
Sbjct: 214 DLYDLVNEVTSGEG 227
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAMKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI I+
Sbjct: 62 EDLETVFGTTDPLEIIPEIV 81
>gi|150400005|ref|YP_001323772.1| putative RNA-associated protein [Methanococcus vannielii SB]
gi|150012708|gb|ABR55160.1| Shwachman-Bodian-Diamond syndrome protein [Methanococcus vannielii
SB]
Length = 234
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I E+L V+ + KG+ E L K F T + EI + IL+KG++Q++ +R E
Sbjct: 39 ISEILAAEAVYKDSGKGEKVPDEMLLKIFETINPLEIAEQILIKGQVQLTANQRKEIHEQ 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +++S IN +T P IE +++ SV++ K++++Q ++I L++ +
Sbjct: 99 KRKQIVSLISRNTINPQTDAPHPPKRIENAMEEARISVDIYKSAEEQVPKIIKELRKLLP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I+ + + V++ + + S + EEWSG G L+ + P
Sbjct: 159 IKFEKRDIVVKIPG---EFAGTAYHTIHEYGSTKQEEWSGDGSLVFVIEIP 206
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + N I R++ G++FEI ++ I E+L V+ + KG+ E
Sbjct: 2 VSLDNAVIARLQSHGEKFEILVDPYLAAKFKEGQPIAISEILAAEAVYKDSGKGEKVPDE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T + EI + IL+K
Sbjct: 62 MLLKIFETINPLEIAEQILIK 82
>gi|354611210|ref|ZP_09029166.1| Shwachman-Bodian-Diamond syndrome protein [Halobacterium sp. DL1]
gi|353196030|gb|EHB61532.1| Shwachman-Bodian-Diamond syndrome protein [Halobacterium sp. DL1]
Length = 241
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF N S+G +EDL++ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGELEDVIAARDVFENASRGDRPAEEDLEEVFGTTDPMEIIPEVIERGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ IN + P IE+ L++ F+V+ ++QQ + + L+
Sbjct: 97 QEQKRRKLINTITRNAINPQMDDAPHPPERIESALEEAGFTVDPMTPAEQQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ V V++ A D + V+ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTVAVQLPA---DYAGSGQARVREFAELEREEWQADGSWVGVLTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ LV + G+G +++ K+
Sbjct: 214 DFYGLVNEVSEGEGETQIVKEKD 236
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + + R+ E ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLETHGERFEVLVDPDAALEMKRDEFEGELEDVIAARDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL++ F T D EI ++
Sbjct: 62 EDLEEVFGTTDPMEIIPEVI 81
>gi|146302860|ref|YP_001190176.1| RNA-associated protein [Metallosphaera sedula DSM 5348]
gi|145701110|gb|ABP94252.1| Shwachman-Bodian-Diamond syndrome protein [Metallosphaera sedula
DSM 5348]
Length = 232
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 192 THTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIA 251
+ T++ +V KG A+ LKK F T D I + I++KGE+ I+ ++R +E + K I
Sbjct: 44 SDTIYKDVKKGLKASPSSLKKVFGTTDFETISREIILKGEIPITAEQRKEMLEAKRKQII 103
Query: 252 TIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQM 311
+ ++ +T P + +E L+Q +++NK + QAL++I L + + I+ A
Sbjct: 104 DFIHRNAVDPKTNLPIPPARLEMALEQARVQIDINKEVEAQALQIIHELTRIIPIKIA-- 161
Query: 312 RVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDELVRTET 370
R +EV + K K++L SV+ W G L+ + I G +++ + + + T
Sbjct: 162 RALLEVKVPQRYSGKAKQQLSSLG-SVKKTVWLDDGTLVAEIEIPAGAQQDVIDKLNSIT 220
Query: 371 RGQGTLELLNLK 382
+G+ + +L +K
Sbjct: 221 KGEVEVRVLQVK 232
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ IV+ + G+RFEI + + R + + + + T++ +V KG A+ LKK
Sbjct: 5 DYVIVKYESHGERFEILVKPKEAMEIREGKSVSLSDAVVSDTIYKDVKKGLKASPSSLKK 64
Query: 75 AFNTEDQTEICKLILMK 91
F T D I + I++K
Sbjct: 65 VFGTTDFETISREIILK 81
>gi|170290985|ref|YP_001737801.1| putative RNA-associated protein [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175065|gb|ACB08118.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 225
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 53/245 (21%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 164
M I R+ +AGKRFEI Y +K ++
Sbjct: 1 MPEPVIARITRAGKRFEIFVYPDKAYQFKEG----------------------------- 31
Query: 165 KKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICK 224
++ DI +L +VFT+ K + A +LKKAF T D I +
Sbjct: 32 -----------------KQVDIKSILAVESVFTDARKSEVAPSSELKKAFGTTDLYSIAE 74
Query: 225 LILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVN 284
IL +GE+Q++ + R E + + I + + ++ +T P V+ IE +K+ ++
Sbjct: 75 TILREGEVQLTAEYRKKLQEEKIRWIINYIHKNFVDPQTNLPHPVARIEKAMKEAKVRID 134
Query: 285 VNKNSKQQALEVIPTLKQCMSIERA--QMRVRVEVSAGVKDVKKLKEKLVKCATSVENEE 342
K+ +QQ +V+ L++ + ++ +M V V SA K L+ ++ +E+
Sbjct: 135 PMKDPEQQIKDVVEQLRKILPLKTGLVKMVVTVPSSAWAK-----ARSLLLGQGNIISEK 189
Query: 343 WSGGG 347
WS G
Sbjct: 190 WSDDG 194
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M I R+ +AGKRFEI Y +K ++ + DI +L +VFT+ K + A +L
Sbjct: 1 MPEPVIARITRAGKRFEIFVYPDKAYQFKEGKQVDIKSILAVESVFTDARKSEVAPSSEL 60
Query: 73 KKAFNTEDQTEICKLIL 89
KKAF T D I + IL
Sbjct: 61 KKAFGTTDLYSIAETIL 77
>gi|227827675|ref|YP_002829455.1| RNA-associated protein [Sulfolobus islandicus M.14.25]
gi|229584879|ref|YP_002843381.1| RNA-associated protein [Sulfolobus islandicus M.16.27]
gi|238619846|ref|YP_002914672.1| RNA-associated protein [Sulfolobus islandicus M.16.4]
gi|385773347|ref|YP_005645913.1| putative RNA-associated protein [Sulfolobus islandicus HVE10/4]
gi|385775985|ref|YP_005648553.1| hypothetical protein [Sulfolobus islandicus REY15A]
gi|227459471|gb|ACP38157.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
M.14.25]
gi|228019929|gb|ACP55336.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
M.16.27]
gi|238380916|gb|ACR42004.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
M.16.4]
gi|323474733|gb|ADX85339.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
REY15A]
gi|323477461|gb|ADX82699.1| putative RNA-associated protein [Sulfolobus islandicus HVE10/4]
Length = 233
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D I K IL+KGEL ++ ++R +E
Sbjct: 39 LSDVVVSDTIYKDVKKGLKASPASLKKVFGTTDFETIVKEILLKGELPVTAEQRKEMLET 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P + +E ++Q +++NK+ + QA++++ + + +
Sbjct: 99 KRKQIIDFIHRNAVDPKTNLPIPPTRLEMAMEQARIQIDLNKDVEAQAMQIVKEISKIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + ++V + K++ +L V+ W G LL L I G +++ +
Sbjct: 159 IKIARALLSIKVPSEYSS--KVRSQLHNLG-EVKKANWLEDGTLLAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +++L ++
Sbjct: 216 KLNNLTKGEVEVKVLQVR 233
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +V+ G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 6 DYVVVKYDSHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKK 65
Query: 75 AFNTEDQTEICKLILMK 91
F T D I K IL+K
Sbjct: 66 VFGTTDFETIVKEILLK 82
>gi|448321225|ref|ZP_21510705.1| RNA-associated protein [Natronococcus amylolyticus DSM 10524]
gi|445604085|gb|ELY58036.1| RNA-associated protein [Natronococcus amylolyticus DSM 10524]
Length = 241
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 98/203 (48%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G ++DL+K F+T D EI ++ +GE+QI+ +R
Sbjct: 37 EDDLEDVIAAEDVFENASRGDRPAEDDLEKVFDTTDPMEIIPEVIREGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P I+ L++ F+V+ + ++QQ + + L+
Sbjct: 97 QERKRKQLIDTITRNAVNPQMDNAPHPPERIDNALEEAGFTVDPMEPAQQQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + K ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQIPAEHAGSAQSK---IREFGDLEREEWQADGSWIGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E + V + G+ EL+ K+
Sbjct: 214 EFYDTVNEHSSGEAETELIKDKD 236
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGDFEDDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+K F+T D EI ++
Sbjct: 62 DDLEKVFDTTDPMEIIPEVI 81
>gi|119872350|ref|YP_930357.1| RNA-associated protein [Pyrobaculum islandicum DSM 4184]
gi|119673758|gb|ABL88014.1| Shwachman-Bodian-Diamond syndrome protein [Pyrobaculum islandicum
DSM 4184]
Length = 232
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 91/162 (56%), Gaps = 3/162 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
ID++L ++ + KG A+++ LKK F T D +I ++I+ +GE+ ++ ++R IE+
Sbjct: 37 IDKILVHEEIYKDAKKGLRASEQSLKKVFGTTDIRKIAEIIIKEGEIPLTAEQRRKLIED 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I +S CI+ T+ P +E ++Q S++ K +++Q E++ +++ +
Sbjct: 97 KKRQIIEWISRNCIDVRTRTPVPPQRVENAIEQARVSIDPFKPAEEQVQEILKEIQRIIP 156
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ A R+ + VS+ +++K +VK A V NE + G
Sbjct: 157 IKIATARISLSVSSTY--AQRVKGLVVKMAKIV-NERYRPDG 195
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
VA+ ++ + G+ FEI + + + ID++L ++ + KG A+++ LKK
Sbjct: 5 VAVAKLDRGGEHFEILVDPDAALELKLGKSLGIDKILVHEEIYKDAKKGLRASEQSLKKV 64
Query: 76 FNTEDQTEICKLIL 89
F T D +I ++I+
Sbjct: 65 FGTTDIRKIAEIII 78
>gi|257076442|ref|ZP_05570803.1| putative RNA-associated protein [Ferroplasma acidarmanus fer1]
Length = 230
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+ L +F + KG+ N+E LK+ F T D +I I+ +G++Q++ ++R +E
Sbjct: 37 DIENDLALPEIFKDARKGERTNEEILKRVFKTTDIGQIAIEIVKRGQIQLTTEQRKEMLE 96
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + + + IN +T P V+ IEA +++ ++ K+ +Q V+ ++ +
Sbjct: 97 LKRKQVINEIVREAINPQTNTPIPVTRIEAAMEEAKVRIDPFKSVDEQVQAVLKAIRPLI 156
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLID--PGKYR 360
I E+A+M +R+ A +L + + T + EEWS G IC+I+ G
Sbjct: 157 PIRMEKARMAIRLTGDA----YGRLYGDISRMGT-ILKEEWSNAG-DYICVIEIPAGMQG 210
Query: 361 EIDELVRTETRGQGTLELL 379
++ +LV +T G ++LL
Sbjct: 211 DLIDLVNRKTSGDADVKLL 229
>gi|448446149|ref|ZP_21590635.1| RNA-associated protein [Halorubrum saccharovorum DSM 1137]
gi|445684341|gb|ELZ36719.1| RNA-associated protein [Halorubrum saccharovorum DSM 1137]
Length = 241
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G +EDL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAEEDLETVFGTTDALEIIPEVVERGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + T ++ +N + P IE L++ F V+ + + Q + + L+
Sbjct: 97 MERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQVDPMEPVENQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
++ +LV T G+G
Sbjct: 214 DLYDLVNEVTSGEG 227
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAMKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFGTTDALEIIPEVV 81
>gi|52548650|gb|AAU82499.1| conserved hypothetical protein [uncultured archaeon GZfos18B6]
Length = 230
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 6/181 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++ L +FTN SKG+ A DL AF++ D EI + I+ +GE+Q++ +R ++E
Sbjct: 38 EVEPALAADEIFTNASKGEKATDGDLMTAFSSTDVVEIAERIIKEGEVQLTAAQRRKKVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ IN +TK P T + IE + + ++ K + E + ++ +
Sbjct: 98 EKRKMVIDQIARISINPQTKTPHTPTRIEIAMTEAKVHIDPFKRVDELVSETVKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ + + +++ A ++ E +K SV EEW G G + + P R DE
Sbjct: 158 PIKIEETEIAIKIPAAY--TARVYE--LKGNYSVIKEEWQGDGSFVAVVKIPAGMR--DE 211
Query: 365 L 365
L
Sbjct: 212 L 212
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R K K FEI R+ + +++ L +FTN SKG+ A
Sbjct: 2 VSLDKAVVARYKHGKKNFEILVDPELAYQIRSEGKGEVEPALAADEIFTNASKGEKATDG 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL AF++ D EI + I+
Sbjct: 62 DLMTAFSSTDVVEIAERII 80
>gi|156937490|ref|YP_001435286.1| RNA-associated protein [Ignicoccus hospitalis KIN4/I]
gi|156566474|gb|ABU81879.1| Shwachman-Bodian-Diamond syndrome protein [Ignicoccus hospitalis
KIN4/I]
Length = 231
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 112/208 (53%), Gaps = 14/208 (6%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L S ++ I+EVL T++ +V G + E LKK F T+D ++ I+ KGE+Q++ +
Sbjct: 29 LKSGKQIPIEEVLIADTIYKDVGSGDRVSPETLKKVFGTDDVKKVALEIITKGEIQLTAE 88
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R IE + + I +++ I+ +TK P + IEA +++ V+ K+ ++QA++++
Sbjct: 89 QRRKIIEQKKRQIINYIAKNAIDPQTKLPIPPARIEAAMERAKVGVDPYKSVEEQAMQIV 148
Query: 298 PTLKQCMSIERAQMRVRVEVSA-----GVKDVKKLKEKLVKCATSVENEEW-SGGGLLLI 351
+ + + I+ A+ ++V++ ++KKL E +++ +W S G L+
Sbjct: 149 RAISRIIPIKIAKAIIQVKIPPKYSGRAYSELKKLGE--------IKSMDWKSDGSLVAE 200
Query: 352 CLIDPGKYREIDELVRTETRGQGTLELL 379
I G EI + + T+G+ +++L
Sbjct: 201 IEIPAGLQGEIMDKLAKMTKGEAEVKVL 228
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
N + R + G +FEI +K + ++ + I+EVL T++ +V G + E LKK
Sbjct: 4 NYVVARYEYKGHKFEILVDPDKALELKSGKQIPIEEVLIADTIYKDVGSGDRVSPETLKK 63
Query: 75 AFNTEDQTEICKLILMK 91
F T+D ++ I+ K
Sbjct: 64 VFGTDDVKKVALEIITK 80
>gi|435852004|ref|YP_007313590.1| rRNA metabolism protein, SBDS family [Methanomethylovorans
hollandica DSM 15978]
gi|433662634|gb|AGB50060.1| rRNA metabolism protein, SBDS family [Methanomethylovorans
hollandica DSM 15978]
Length = 230
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E++ ++FT+ +G+ A++ DL F T D I K I+ GELQ++ ++R ++
Sbjct: 39 IEEIIAVESIFTDAGQGEHASESDLLNIFGTLDALVIAKEIISHGELQLTKEQRKQILDE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + +++ IN +TK P S IE +++ ++ K+ +Q + V+ ++ +
Sbjct: 99 KTKRIISTIAQNAINPQTKAPHPPSRIEKAMEEAKIHIDPFKSVDEQVMIVMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREIDE 364
I ++++ V+V + K ++ + T V EEW + G + + + G +
Sbjct: 159 IRFEEVQIAVKVPG--EYAPKSYGEIARFGTLV-REEWQANGSWVGVVKMPAGMQNDFYG 215
Query: 365 LVRTETRGQGTLELL 379
LV T+G +LL
Sbjct: 216 LVNHLTKGDAETKLL 230
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 38/72 (52%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
I R+KK +E+ + ++ + + I+E++ ++FT+ +G+ A++ DL F
Sbjct: 9 IARLKKGKNHYEVFVEPDGALALKKGDDVKIEEIIAVESIFTDAGQGEHASESDLLNIFG 68
Query: 78 TEDQTEICKLIL 89
T D I K I+
Sbjct: 69 TLDALVIAKEII 80
>gi|448362717|ref|ZP_21551321.1| RNA-associated protein [Natrialba asiatica DSM 12278]
gi|445647339|gb|ELZ00313.1| RNA-associated protein [Natrialba asiatica DSM 12278]
Length = 241
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + DL+K F+T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDLEKVFDTTDPLEIIPDVITRGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 97 QEQKRKQLVDTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMETVESQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQADGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E ++V + G+ EL+ K+
Sbjct: 214 EFYDVVNEHSSGEAETELIKDKD 236
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+K F+T D EI ++ +
Sbjct: 62 SDLEKVFDTTDPLEIIPDVITR 83
>gi|448449386|ref|ZP_21591715.1| RNA-associated protein [Halorubrum litoreum JCM 13561]
gi|448507202|ref|ZP_21614842.1| RNA-associated protein [Halorubrum distributum JCM 9100]
gi|448523878|ref|ZP_21619065.1| RNA-associated protein [Halorubrum distributum JCM 10118]
gi|445698924|gb|ELZ50960.1| RNA-associated protein [Halorubrum distributum JCM 9100]
gi|445700951|gb|ELZ52942.1| RNA-associated protein [Halorubrum distributum JCM 10118]
gi|445813477|gb|EMA63455.1| RNA-associated protein [Halorubrum litoreum JCM 13561]
Length = 241
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ VF N S+G +EDL+ F T D EI ++ +GE+QI+ ++R+
Sbjct: 37 EGDLEEVIAAEDVFENASRGDRPAEEDLETVFGTTDALEIIPEVVDRGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
++ +LV T G+G ++ K+
Sbjct: 214 DLYDLVNEVTSGEGDARVIKDKD 236
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFGTTDALEIIPEVV 81
>gi|336477105|ref|YP_004616246.1| Ribosome maturation protein SBDS [Methanosalsum zhilinae DSM 4017]
gi|335930486|gb|AEH61027.1| Ribosome maturation protein SBDS [Methanosalsum zhilinae DSM 4017]
Length = 230
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 98/194 (50%), Gaps = 2/194 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
++ +L +VF + +KG +++ DL F T D EI K I+ GELQ++ ++R +E+
Sbjct: 39 VESILAVESVFEDAAKGDHSSESDLANVFGTNDVIEIAKNIIEHGELQLTSEQRKQMLED 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + T +++ IN +TK P S IE +++ +++ K+ +Q V+ ++ +
Sbjct: 99 KTRQVITTIAQNAINPQTKTPHPPSRIEKAMEEAKVHIDLFKSIDEQVNIVMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I ++ V V++ + K ++ K V++E + G + + I G + L
Sbjct: 159 IRFEEVDVAVKIPP--EYAAKSYGEISKFGQLVKDEWQNDGSWVAVVRIPAGIQNDFYSL 216
Query: 366 VRTETRGQGTLELL 379
+ T+G +LL
Sbjct: 217 INRLTKGDAETKLL 230
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + R+KK GK+FE+ +S + + ++ +L +VF + +KG +++
Sbjct: 2 VSLDEAVTARLKKGGKQFEVLVDPEGALSLKKGDDVQVESILAVESVFEDAAKGDHSSES 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL F T D EI K I+
Sbjct: 62 DLANVFGTNDVIEIAKNII 80
>gi|323332486|gb|EGA73894.1| Sdo1p [Saccharomyces cerevisiae AWRI796]
Length = 192
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 84/154 (54%), Gaps = 19/154 (12%)
Query: 237 KERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEV 296
KER + ++ TIVS KCIN +K+ + +MI L+++ FS +NK +K QALE
Sbjct: 40 KERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPVINKPAKLQALEA 99
Query: 297 IPTL--KQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKC-------ATSVENEEWSGGG 347
I L KQ + I RA+M+V+V +S + +L EK+ K +T E + W+ G
Sbjct: 100 IKLLVSKQIIPIVRAKMKVKVAISEPSRQ-PELIEKISKLIASSPGESTKPELDPWTCTG 158
Query: 348 LLLICLIDPGKYREIDELVRTETRGQGTLELLNL 381
LIDP YR++ T +GT+++L++
Sbjct: 159 -----LIDPVNYRDL----MTLCDKKGTVQVLDM 183
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 388 EEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
++ER + ++ TIVS KCIN +K+ + +MI L+++ FS +NK +K QALE
Sbjct: 39 KKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPPTMIHKALQELKFSPVINKPAKLQALE 98
Query: 448 EDK 450
K
Sbjct: 99 AIK 101
>gi|330835840|ref|YP_004410568.1| putative RNA-associated protein [Metallosphaera cuprina Ar-4]
gi|329567979|gb|AEB96084.1| putative RNA-associated protein [Metallosphaera cuprina Ar-4]
Length = 232
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +++ + T++ +V KG A+ LKK F T D + K I++KGE+ ++ ++R +E
Sbjct: 38 LSDIVVSDTIYKDVKKGLKASPASLKKVFGTTDFETVSKEIILKGEIPVTAEQRKELLET 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I + I+ +T P + +E ++Q +++NK+ + QAL++I L + +
Sbjct: 98 KRRQIIDFIHRNAIDPKTNLPIPPARLEMAMEQARIQIDMNKDIEAQALQIIHELTKVIP 157
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A R +EV K K K+ L SV+ W G L+ + I G ++I +
Sbjct: 158 IKVA--RAILEVKIPQKYSGKAKQSLSSLG-SVKKTVWLNDGTLVAEIEIPAGAQQDIID 214
Query: 365 LVRTETRGQGTLELLNLK 382
+ + T+G+ + ++ +K
Sbjct: 215 KLNSITKGEVEVRVIQVK 232
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ I + + G+RFEI + + R + +++ + T++ +V KG A+ LKK
Sbjct: 5 DYVIAKFESHGERFEILVKPKEAMQLREGKGISLSDIVVSDTIYKDVKKGLKASPASLKK 64
Query: 75 AFNTEDQTEICKLILMK 91
F T D + K I++K
Sbjct: 65 VFGTTDFETVSKEIILK 81
>gi|159040785|ref|YP_001540037.1| putative RNA-associated protein [Caldivirga maquilingensis IC-167]
gi|157919620|gb|ABW01047.1| Shwachman-Bodian-Diamond syndrome protein [Caldivirga
maquilingensis IC-167]
Length = 233
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+D+VL T TVF + +G A++ LK+ F T D + ++IL E+ ++ ++R IE+
Sbjct: 38 LDKVLITDTVFRDSKRGLRASEIALKRVFGTTDHRKAAEIILRNAEIPLTSEQRRRLIED 97
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +S CI+ TK P IE L + +++ K +Q +V+ L++ +
Sbjct: 98 KKKQIIDWISRNCIDARTKAPLPPQRIELALNNVDVAIDPFKGVDEQINDVLKALQKVIP 157
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I+ A +EV+ G + +++K L + ++ + G L+L + G +
Sbjct: 158 IKVAV--ATLEVTVGPEHGQRVKSALARMGRILKEQYDESGNLILQLEVPAGLQDTVIGK 215
Query: 366 VRTETRGQGTLELLNL 381
V T G+ ++LL +
Sbjct: 216 VNEMTHGESEVKLLGV 231
>gi|448310316|ref|ZP_21500161.1| RNA-associated protein [Natronolimnobius innermongolicus JCM 12255]
gi|445608260|gb|ELY62116.1| RNA-associated protein [Natronolimnobius innermongolicus JCM 12255]
Length = 241
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF N S+G ++DL+ F T D EI ++ KGE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFENASRGDRPAEDDLETVFETTDPLEIIPEVIKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P I+ L+Q F+V+ + +QQ + + L+
Sbjct: 97 QEQKRKQLIDTIARNAVNPQMDNAPHPPDRIDNALEQAGFTVDPMEPVEQQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + + V+ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQADGSWIGVLTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ ++V + G+ E++ K+
Sbjct: 214 DFYDVVNEHSSGEAETEIIKDKD 236
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + +++ G RFE+ + ++ R + D++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTAQLESHGARFEVLVDPDAALAIKRGEFDGDLEEVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
+DL+ F T D EI ++ K
Sbjct: 62 DDLETVFETTDPLEIIPEVIKK 83
>gi|448423414|ref|ZP_21581956.1| RNA-associated protein [Halorubrum terrestre JCM 10247]
gi|448480086|ref|ZP_21604480.1| RNA-associated protein [Halorubrum arcis JCM 13916]
gi|445683467|gb|ELZ35862.1| RNA-associated protein [Halorubrum terrestre JCM 10247]
gi|445822271|gb|EMA72041.1| RNA-associated protein [Halorubrum arcis JCM 13916]
Length = 241
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ +F N S+G +EDL+ F T D EI ++ +GE+QI+ ++R+
Sbjct: 37 EGDLEEVIAAEDIFENASRGDRPAEEDLETVFGTTDALEIIPEVVDRGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
++ +LV T G+G ++ K+
Sbjct: 214 DLYDLVNEVTSGEGDARVIKDKD 236
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ +F N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDIFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFGTTDALEIIPEVV 81
>gi|229582058|ref|YP_002840457.1| putative RNA-associated protein [Sulfolobus islandicus Y.N.15.51]
gi|228012774|gb|ACP48535.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
Y.N.15.51]
Length = 233
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D I K IL+KGEL ++ ++R ++
Sbjct: 39 LSDVVVSDTIYKDVKKGLKASPASLKKVFGTTDFETIVKEILLKGELPVTAEQRKEMLDT 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P + +E ++Q +++NK+ + QA++++ + + +
Sbjct: 99 KRKQIIDFIHRNAVDPKTNLPIPPTRLEMAMEQARIQIDLNKDVEAQAMQIVKEISKIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + ++V + K++ +L V+ W G LL L I G +++ +
Sbjct: 159 IKIARALLSIKVPSEYSS--KVRSQLHNLG-EVKKANWLEDGTLLAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +++L ++
Sbjct: 216 KLNNLTKGEVEVKVLQVR 233
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +V+ G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 6 DYVVVKYDSHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKK 65
Query: 75 AFNTEDQTEICKLILMK 91
F T D I K IL+K
Sbjct: 66 VFGTTDFETIVKEILLK 82
>gi|448538317|ref|ZP_21622823.1| RNA-associated protein [Halorubrum hochstenium ATCC 700873]
gi|445701399|gb|ELZ53381.1| RNA-associated protein [Halorubrum hochstenium ATCC 700873]
Length = 241
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ VF N S+G +EDL+ F T + EI ++ +GE+QI+ ++R+
Sbjct: 37 EGDLEEVIAAEDVFENASRGDRPAEEDLETVFGTTEPLEIIPEVVERGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
E+ +LV T G+G
Sbjct: 214 ELYDLVNEVTSGEG 227
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F T + EI ++ +
Sbjct: 62 EDLETVFGTTEPLEIIPEVVER 83
>gi|116754661|ref|YP_843779.1| putative RNA-associated protein [Methanosaeta thermophila PT]
gi|116666112|gb|ABK15139.1| Shwachman-Bodian-Diamond syndrome protein [Methanosaeta thermophila
PT]
Length = 232
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+++L VF N S+G + +EDL KAF T D I ++I+ KGE+ ++ ++R IE+
Sbjct: 39 IEDILAVEDVFENASRGDRSAEEDLLKAFGTTDPLAIAEIIIKKGEISLTAEQRRRVIES 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + +++ IN +T+ P S IE + + ++ K+ ++ + ++ +
Sbjct: 99 KKRQVIELIARNAINPQTRTPHPPSRIEQAMAEAKVHIDPTKSLEELVAITMKAIRPIIP 158
Query: 306 I--ERAQMRVRVEVSAGVKDVKKLKE--KLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
I E ++ V+V S K ++ KLV+ E W + G + + I G
Sbjct: 159 IRFEEVEVAVKVPASYAAKSYGEISTFGKLVR-------EAWQNDGSWIGVIRIPAGMQT 211
Query: 361 EIDELVRTETRGQGTLELL 379
E LV T+G +LL
Sbjct: 212 EFYSLVNRLTKGDAETKLL 230
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+++ R+K G FE+ + ++ R + I+++L VF N S+G + +E
Sbjct: 2 VKLDEAVPARLKSHGAVFEVLVDPDGALAMRRGEDVRIEDILAVEDVFENASRGDRSAEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
DL KAF T D I ++I+ K
Sbjct: 62 DLLKAFGTTDPLAIAEIIIKK 82
>gi|227830372|ref|YP_002832152.1| RNA-associated protein [Sulfolobus islandicus L.S.2.15]
gi|284997878|ref|YP_003419645.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|227456820|gb|ACP35507.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
L.S.2.15]
gi|284445773|gb|ADB87275.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
L.D.8.5]
Length = 233
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D I K IL+KGEL ++ ++R ++
Sbjct: 39 LSDVVVSDTIYKDVKKGLKASPTSLKKVFGTTDFETIVKEILLKGELPVTAEQRKEMLDT 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P + +E ++Q +++NK+ + QA++++ + + +
Sbjct: 99 KRKQIIDFIHRNAVDPKTNLPIPPTRLEMAMEQARIQIDLNKDVEAQAMQIVKEISKIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + ++V + K++ +L V+ W G LL L I G +++ +
Sbjct: 159 IKIARALLSIKVPSEYSS--KVRSQLHNLG-EVKKANWLEDGTLLAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +++L ++
Sbjct: 216 KLNNLTKGEVEVKVLQVR 233
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +V+ G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 6 DYVVVKYDSHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPTSLKK 65
Query: 75 AFNTEDQTEICKLILMK 91
F T D I K IL+K
Sbjct: 66 VFGTTDFETIVKEILLK 82
>gi|229579190|ref|YP_002837588.1| RNA-associated protein [Sulfolobus islandicus Y.G.57.14]
gi|228009904|gb|ACP45666.1| Shwachman-Bodian-Diamond syndrome protein [Sulfolobus islandicus
Y.G.57.14]
Length = 233
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+ +V+ + T++ +V KG A+ LKK F T D I K IL+KGEL ++ ++R ++
Sbjct: 39 LSDVVVSDTIYKDVKKGLKASPASLKKVFGTTDFETIVKEILLKGELPVTAEQRKEMLDT 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ +T P + +E + Q +++NK+ + QA++++ + + +
Sbjct: 99 KRKQIIDFIHRNAVDPKTNLPIPPTRLEMAMAQARIQIDLNKDVEAQAMQIVKEISKIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREIDE 364
I+ A+ + ++V + K++ +L V+ W G LL L I G +++ +
Sbjct: 159 IKIARALLSIKVPSEYSS--KVRSQLHNLG-EVKKANWLEDGTLLAELEIPAGAQQDVID 215
Query: 365 LVRTETRGQGTLELLNLK 382
+ T+G+ +++L ++
Sbjct: 216 KLNNLTKGEVEVKVLQVR 233
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +V+ G+RFEI + +++R+ + +V+ + T++ +V KG A+ LKK
Sbjct: 6 DYVVVKYDSHGERFEILAKPKEALAFRSGKSISLSDVVVSDTIYKDVKKGLKASPASLKK 65
Query: 75 AFNTEDQTEICKLILMK 91
F T D I K IL+K
Sbjct: 66 VFGTTDFETIVKEILLK 82
>gi|52549701|gb|AAU83550.1| conserved hypothetical protein [uncultured archaeon GZfos30H9]
Length = 219
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 6/181 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++ L +FT+ SKG+ A DL AF+T D EI + I+ +GE+Q++ +R ++E
Sbjct: 38 EVEPALAADEIFTDASKGEKATDGDLMAAFSTTDVVEIAERIIKEGEVQLTAAQRRKKVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ IN +TK P T + IE + + ++ ++ + E + ++ +
Sbjct: 98 EKRKMVIDQIARISINPQTKTPHTPTRIEIAMTEAKVHIDPFRSVDELVSETVKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ + + +++ A ++ E +K SV EEW G G + + P R DE
Sbjct: 158 PIKIEETEIAIKIPAAY--TGRVYE--LKGNYSVIKEEWQGDGSFVAVVKIPAGMR--DE 211
Query: 365 L 365
L
Sbjct: 212 L 212
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R K K FE R+ + +++ L +FT+ SKG+ A
Sbjct: 2 VSLDKAVVARYKHGKKNFETLVDPELAYRIRSEGKGEVEPALAADEIFTDASKGEKATDG 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL AF+T D EI + I+
Sbjct: 62 DLMAAFSTTDVVEIAERII 80
>gi|304314832|ref|YP_003849979.1| exosome subunit [Methanothermobacter marburgensis str. Marburg]
gi|302588291|gb|ADL58666.1| predicted exosome subunit [Methanothermobacter marburgensis str.
Marburg]
Length = 232
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 96/194 (49%), Gaps = 12/194 (6%)
Query: 181 FREKD----IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISD 236
FR +D +++VL VF + KG A++E ++K F T D E+ +IL +G +Q++
Sbjct: 31 FRREDSEVSVEDVLAVQEVFRDARKGDKASEEAMRKVFETADPLEVTPIILQRGTIQLTA 90
Query: 237 KERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEV 296
++R IE++ K I + ++ + IN + P IE +++ V+ K +Q V
Sbjct: 91 EQRRQMIEDKRKKIISKIAREAINPQNGLPHPPKRIEKAMEEARVHVDPFKTVDEQVNIV 150
Query: 297 IPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
+ ++ + I+ ++ V +++ D ++ ++NEEW G + + P
Sbjct: 151 LKAIRTKIPIKFEKVTVAIKIPG---DRAGPAYGVISNFGKIKNEEWQSDGSWIAVVEIP 207
Query: 357 GK-----YREIDEL 365
G Y++I+EL
Sbjct: 208 GGLQDSFYQKINEL 221
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRN-NIEKDIDEVLQTHTVFTNVSKGQAANK 69
+ + + I R++ G+RFEI + +R + E +++VL VF + KG A++
Sbjct: 2 VSLEDAVIARLESHGERFEILVDPDLAAEFRREDSEVSVEDVLAVQEVFRDARKGDKASE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
E ++K F T D E+ +IL +
Sbjct: 62 EAMRKVFETADPLEVTPIILQR 83
>gi|288930695|ref|YP_003434755.1| ribosome maturation protein SBDS-like protein [Ferroglobus placidus
DSM 10642]
gi|288892943|gb|ADC64480.1| Ribosome maturation protein SBDS-like protein [Ferroglobus placidus
DSM 10642]
Length = 235
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 100/197 (50%), Gaps = 4/197 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+ +E++ +F + KG+ A+ EDL+K F T + EI K I+M+GE+Q++ ++R +E
Sbjct: 38 NFEELVAVEEIFHDARKGERASTEDLQKVFGTTNVREIIKKIVMEGEVQLTAEQRKEMLE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I + ++ T P T + IE+ L++ ++++ K + Q +V+ LK +
Sbjct: 98 QKKKQIIEYIRRNSVDPRTGAPHTYARIESALEEAKVNIDIFKPVEAQVKDVVKALKPIL 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
+ ++ + +++ + + L + EEW S G + + I G + E+
Sbjct: 158 PLRFEEIEIAIKIPP--EHTGRAISALYSFG-KILKEEWQSDGSWICVMRIPAGMHGELL 214
Query: 364 ELVRTETRGQGTLELLN 380
+L+ +G+ ++L
Sbjct: 215 DLLGKVAKGEALTKILR 231
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R+KK G FE+ + + + +E++ +F + KG+ A+ E
Sbjct: 2 VSLEKAVVARLKKGGMVFEVLVDPYLARDLKEGKDVNFEELVAVEEIFHDARKGERASTE 61
Query: 71 DLKKAFNTEDQTEICKLILM 90
DL+K F T + EI K I+M
Sbjct: 62 DLQKVFGTTNVREIIKKIVM 81
>gi|448351924|ref|ZP_21540718.1| RNA-associated protein [Natrialba taiwanensis DSM 12281]
gi|445632484|gb|ELY85696.1| RNA-associated protein [Natrialba taiwanensis DSM 12281]
Length = 241
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + DL+K F+T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDLEKVFDTTDPLEIIPDVITEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 97 QEKKRKQLVDTIARNAVNPQMDNAPHPPDRIENALEEAGFTVDPMETVESQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTIAVQIPA---EYAGSAQAQVRQFGDLEREEWQADGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E ++V + G EL+ K+
Sbjct: 214 EFYDVVNEHSSGNAETELIKDKD 236
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T D EI ++
Sbjct: 62 SDLEKVFDTTDPLEIIPDVI 81
>gi|312137046|ref|YP_004004383.1| ribosome maturation protein sbds [Methanothermus fervidus DSM 2088]
gi|311224765|gb|ADP77621.1| Ribosome maturation protein SBDS [Methanothermus fervidus DSM 2088]
Length = 233
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI++++ +F + KG+ A+++ +++ F T D E+ K I++KG +Q++ +++ +E
Sbjct: 39 DIEDIIAVEEIFKDAKKGEKASEKKMEEVFGTADPLEVAKKIILKGSIQLTAEQKRRMME 98
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+FK I +S + IN +T P IE +K+ ++ K +Q EV+ ++ +
Sbjct: 99 EKFKKIVNKISREAINPQTGHPHPPKRIERAMKECKIHIDPFKPVDEQIKEVLKAIRTKI 158
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGK-----Y 359
I+ ++++ V++ K V + K +E EEW G + + PG Y
Sbjct: 159 PIKFEKVKIAVKIPG--KYVGSSYGTITKYCKILE-EEWQDDGSWIGIVELPGGLQNKFY 215
Query: 360 REIDELVRTET 370
E+ +L E
Sbjct: 216 EELSKLTAGEV 226
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEK-DIDEVLQTHTVFTNVSKGQAANK 69
+ + + I R + G+RFEI + + +R EK DI++++ +F + KG+ A++
Sbjct: 2 VSIEDAVIARFESHGERFEILVDPDLALEFRKTPEKYDIEDIIAVEEIFKDAKKGEKASE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
+ +++ F T D E+ K I++K
Sbjct: 62 KKMEEVFGTADPLEVAKKIILK 83
>gi|219853089|ref|YP_002467521.1| RNA-associated protein [Methanosphaerula palustris E1-9c]
gi|219547348|gb|ACL17798.1| Shwachman-Bodian-Diamond syndrome protein [Methanosphaerula
palustris E1-9c]
Length = 234
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 92/197 (46%), Gaps = 4/197 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+I++++ VF N + G A+ E L K F T D I K I+ KGE+ ++ +R I
Sbjct: 38 EIEDIVAALNVFENAAHGDRASDETLMKVFGTLDFPTIAKRIIEKGEIHLTSDQRRHMIA 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
++ K + ++ +N +T P + IE +++ +++ ++ + + L+ +
Sbjct: 98 DKRKQVVNFIARNAVNPQTGYPHPPTRIEMAMEEARVNIDPFRHLDDLVKDTMKALRPLI 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYREID 363
I ++R+ V++ K E ++ +E +EW G + + I G E
Sbjct: 158 PIRFEELRLAVKIPPDYA-AKSFPE--IRAGAVIEKDEWQRDGSWICVVRIPAGIQNEFY 214
Query: 364 ELVRTETRGQGTLELLN 380
V T+G+G ++ LN
Sbjct: 215 TTVNRLTKGEGEVKKLN 231
>gi|52549530|gb|AAU83379.1| conserved hypothetical protein [uncultured archaeon GZfos27G5]
Length = 230
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E++I+++L +F N SKG+ A + DL + F+T D EI K I+ +GE+Q++ +R +
Sbjct: 36 EENIEDILAVEEIFENASKGEKATEADLMRVFSTSDVREIAKKIVKEGEVQLTAGQRKKK 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S+ IN +T P IE +K+ ++ K+ +Q + ++
Sbjct: 96 LEEKTKAVINRISQISINPKTNTPHPPQRIEIAMKEAKVHIDPFKSVDEQVSTTVKAIRP 155
Query: 303 CMSIERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ I+ +++V ++V A + +LK+ V EEW G + + P R+
Sbjct: 156 IIPIKIEEIQVAIKVPAAYTGQIYELKKNY-----GVTKEEWQADGSFIALVQVPAGMRD 210
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R K K FE+ + +R+ E++I+++L +F N SKG+ A +
Sbjct: 2 VSLDKAVIARYKSGKKNFEVLVDPERADLFRSGAEENIEDILAVEEIFENASKGEKATEA 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL + F+T D EI K I+
Sbjct: 62 DLMRVFSTSDVREIAKKIV 80
>gi|20090629|ref|NP_616704.1| putative RNA-associated protein [Methanosarcina acetivorans C2A]
gi|19915672|gb|AAM05184.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 4/198 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E +++++L T+F + ++G A + D+ +F T D EI +IL GELQ++ ++R
Sbjct: 36 EVNLEDILAVETIFEDANRGDRAAESDILNSFETTDPFEIAAVILKSGELQLTAEQRKRM 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S IN +T+ P + IE +++ ++ K+ Q + ++
Sbjct: 96 LEEKKKKVIYTISRNAINPQTRAPHPPARIERAMEEAKVHIDPLKSVDQLVTITMKAIRP 155
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG-GGLLLICLIDPGKYRE 361
+ I ++ + V++ + K + K T + EEW G G + + I G +
Sbjct: 156 LIPIRFEEINIAVKIPP--EYAPKAYGDISKVGT-ITKEEWQGDGSWIAVVRIPAGVQTD 212
Query: 362 IDELVRTETRGQGTLELL 379
L+ T+G+ +LL
Sbjct: 213 FYALINHLTKGEAQTKLL 230
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 20 RMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 79
R+K+ K FE+ ++++ E +++++L T+F + ++G A + D+ +F T
Sbjct: 11 RLKRGSKHFEVLVEPEGALAYKRGEEVNLEDILAVETIFEDANRGDRAAESDILNSFETT 70
Query: 80 DQTEICKLIL 89
D EI +IL
Sbjct: 71 DPFEIAAVIL 80
>gi|448364979|ref|ZP_21553554.1| RNA-associated protein [Natrialba aegyptia DSM 13077]
gi|445657203|gb|ELZ10033.1| RNA-associated protein [Natrialba aegyptia DSM 13077]
Length = 241
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + DL+K F+T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDLEKVFDTTDPLEIIPDVITEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 97 QEKKRKQLVDTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMETVESQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTIAVQIPA---EYAGSAQAQVRQFGDLEREEWQADGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E ++V + G EL+ K+
Sbjct: 214 EFYDVVNEHSSGNAETELIKDKD 236
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T D EI ++
Sbjct: 62 SDLEKVFDTTDPLEIIPDVI 81
>gi|410721460|ref|ZP_11360795.1| rRNA metabolism protein, SBDS family [Methanobacterium sp.
Maddingley MBC34]
gi|410598917|gb|EKQ53480.1| rRNA metabolism protein, SBDS family [Methanobacterium sp.
Maddingley MBC34]
Length = 230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 12/199 (6%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+E+L VF + KG A++E + KAF+T D E LI+ KG++Q++ ++R E+
Sbjct: 39 IEEILAVEEVFKDAKKGDKASEEAMNKAFDTTDPLEAAALIIRKGQVQLTAQQRRDMQED 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K + ++ + IN +TK P IE +++ V+ K+ +Q + +++ +
Sbjct: 99 KRKMVVAKIAREAINPQTKLPHPARRIEIAMEEAKVRVDPFKSVDEQVNITLKAIRKLIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGK-----YR 360
I ++RV + + +D K+ ++ EEW G + + PG Y+
Sbjct: 159 IRIEKVRVAIRIPG--EDTGKVY-GVIPAYGKTMKEEWQKDGSWVAVVEIPGGMQESFYQ 215
Query: 361 EIDELVRTETRGQGTLELL 379
++ E+ T GQ +LL
Sbjct: 216 KLSEI----THGQVETKLL 230
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + + I R++ G+RFEI + ++ + I+E+L VF + KG A++E
Sbjct: 2 ITLEDAVIARLEYYGERFEILVDPDLASDFKKGEDIKIEEILAVEEVFKDAKKGDKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+ KAF+T D E LI+ K
Sbjct: 62 AMNKAFDTTDPLEAAALIIRK 82
>gi|448468875|ref|ZP_21599972.1| RNA-associated protein [Halorubrum kocurii JCM 14978]
gi|445809985|gb|EMA60018.1| RNA-associated protein [Halorubrum kocurii JCM 14978]
Length = 241
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF N S+G +EDL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGELEDVIAAEDVFENASRGDRPAEEDLETVFGTTDPLEIIPEVVDRGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + T ++ +N + P IE L + F V+ + + Q + + L+
Sbjct: 97 LERKHNQLVTTITRNAVNPQMDDSPHPPERIERALDEAGFQVDPMEPVENQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
++ +LV T G+G
Sbjct: 214 DLYDLVNEVTSGEG 227
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAMKRGEFEGELEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFGTTDPLEIIPEVV 81
>gi|52548821|gb|AAU82670.1| conserved hypothetical protein [uncultured archaeon GZfos19A5]
Length = 230
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E++I+++L +F N SKG+ A + DL + F+T D EI K I+ +GE+Q++ +R +
Sbjct: 36 EENIEDILAVEEIFENASKGEKATEADLMRVFSTSDVREIAKKIVKEGEVQLTAGQRKKK 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S+ IN +T P IE +K+ ++ K+ +Q + ++
Sbjct: 96 LEEKTKAVINRISQISINPKTNTPHPPQRIEIAMKEAKVHIDPFKSVDEQVSATVKAIRP 155
Query: 303 CMSIERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ I+ +++V +++ A + +LK+ V EEW G + + P R+
Sbjct: 156 IIPIKIEEIQVAIKIPAAYTGQIYELKKNY-----GVTKEEWQADGSFIALVQVPAGMRD 210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R K K FE+ + +R+ E++I+++L +F N SKG+ A +
Sbjct: 2 VSLDKAVIARYKSGKKNFEVLVDPERADLFRDGAEENIEDILAVEEIFENASKGEKATEA 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL + F+T D EI K I+
Sbjct: 62 DLMRVFSTSDVREIAKKIV 80
>gi|52352383|gb|AAU43672.1| conserved hypothetical protein [uncultured archaeon GZfos26D8]
Length = 230
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E++I+++L +F N SKG+ A + DL + F+T D EI K I+ +GE+Q++ +R +
Sbjct: 36 EENIEDILAVEEIFENASKGEKATEADLMRVFSTSDVREIAKKIVKEGEVQLTAGQRKKK 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S+ IN +T P IE +K+ ++ K+ +Q + ++
Sbjct: 96 LEEKTKAVINRISQISINPKTNTPHPPQRIEIAMKEAKVHIDPFKSVDEQVSATVKAIRP 155
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ I+ +++V +++ A ++ E +K V EEW G + + P R+
Sbjct: 156 IIPIKIEEIQVAIKIPAAY--TGRIYE--LKKNYGVTKEEWQADGSFIAMVQVPAGMRD 210
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R K K FE+ ++ +R E++I+++L +F N SKG+ A +
Sbjct: 2 VSLDKAVIARYKSGKKNFEVLVDPDRADLFRGGAEENIEDILAVEEIFENASKGEKATEA 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL + F+T D EI K I+
Sbjct: 62 DLMRVFSTSDVREIAKKIV 80
>gi|448355909|ref|ZP_21544658.1| RNA-associated protein [Natrialba hulunbeirensis JCM 10989]
gi|445634617|gb|ELY87796.1| RNA-associated protein [Natrialba hulunbeirensis JCM 10989]
Length = 241
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF N S+G ++DL+ F+T D EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEDVIAAEDVFENASRGDRPAEDDLETVFDTTDPLEIIPEVVKEGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ +N + P IE L++ F+V+ + + Q E + L+
Sbjct: 99 QKRKQLINTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMETVESQVDEALDDLRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V++ A D + V+ +E EEW G + + P G E
Sbjct: 159 IPIRFEEVTIAVQIPA---DYAGSAQAQVRQFGDLEREEWQPDGSWIGVVTFPAGMQNEF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V + G+ EL+ K+
Sbjct: 216 YDVVNEHSSGKAETELVKDKD 236
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRDEFDGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T D EI ++
Sbjct: 62 DDLETVFDTTDPLEIIPEVV 81
>gi|222479281|ref|YP_002565518.1| RNA-associated protein [Halorubrum lacusprofundi ATCC 49239]
gi|222452183|gb|ACM56448.1| Shwachman-Bodian-Diamond syndrome protein [Halorubrum lacusprofundi
ATCC 49239]
Length = 241
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF N S+G +EDL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGNLEDVIAAEDVFENASRGDRPAEEDLETVFGTTDPLEIIPEVVERGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 MERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
++ +LV T G+G
Sbjct: 214 DLYDLVNEVTSGEG 227
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAMKRGEFEGNLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+ F T D EI ++
Sbjct: 62 EDLETVFGTTDPLEIIPEVV 81
>gi|52550474|gb|AAU84323.1| conserved hypothetical protein [uncultured archaeon GZfos9D1]
Length = 230
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 6/180 (3%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E++I+++L +F N SKG+ A + DL + F+T D EI K I+ +GE+Q++ +R +
Sbjct: 36 EENIEDILAVEEIFENTSKGEKATEADLMRVFSTSDVREIAKKIVKEGEVQLTAGQRKKK 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S+ IN +T P IE +K+ ++ K+ +Q + ++
Sbjct: 96 LEEKTKAVINRISQISINPKTNTPHPPQRIEIAMKEAKVHIDPFKSVDEQVSATVKAIRP 155
Query: 303 CMSIERAQMRVRVEVSAG-VKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ I+ +++V +++ A + +LK+ V EEW G + + P R+
Sbjct: 156 IIPIKIEEIQVAIKIPAAYTGQIYELKKNY-----GVTKEEWQADGSFIALVQVPAGMRD 210
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R K K FE+ ++ +R E++I+++L +F N SKG+ A +
Sbjct: 2 VSLDKAVIARYKSGKKNFEVLVDPDRADLFRGGAEENIEDILAVEEIFENTSKGEKATEA 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL + F+T D EI K I+
Sbjct: 62 DLMRVFSTSDVREIAKKIV 80
>gi|408404987|ref|YP_006862970.1| ribosome maturation protein SDO1 [Candidatus Nitrososphaera
gargensis Ga9.2]
gi|408365583|gb|AFU59313.1| putative ribosome maturation protein SDO1 [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 228
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI VL + ++++ +KG A+ E + K F T D E+ K IL +GEL ++ +R +E
Sbjct: 36 DISSVLVSDEIYSDANKGSRASSEKMMKHFKTTDAAEVAKQILARGELNLTTDQRRKMVE 95
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I +++ ++ +T P + IEA + + ++ K + QA V+ L++ +
Sbjct: 96 EKKKQIVQFINKSFVDPKTHLPHPIIRIEAAMDEARVIIDPFKKADDQAKTVVDALRKIL 155
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL 353
+ E A++ V V + ++K + +EEW G L L
Sbjct: 156 PLKSETAKLTVTVPPQFAAQSY-----SVLKSTGDLRSEEWLSDGSLRAVL 201
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+ R+ G +FE+ + + ++ DI VL + ++++ +KG A+ E + K F
Sbjct: 7 VARLTLDGDKFELLVKPDPALEYKLGKRADISSVLVSDEIYSDANKGSRASSEKMMKHFK 66
Query: 78 TEDQTEICKLILMK 91
T D E+ K IL +
Sbjct: 67 TTDAAEVAKQILAR 80
>gi|385302572|gb|EIF46698.1| shwachman-bodian-diamond syndrome protein [Dekkera bruxellensis
AWRI1499]
Length = 146
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 83/141 (58%), Gaps = 17/141 (12%)
Query: 248 KDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMS 305
K++ I+S KC+N +TK+ + +MIE LK++ +++ +N+K +ALE I L KQ +
Sbjct: 6 KEVLNIISTKCVNPKTKKRYPPTMIEKALKELKYNMTNARNAKTKALEAIRLLVEKQIIP 65
Query: 306 IERAQMRVRVEVS-----AGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYR 360
I RAQM++R+ V G KD + ++ +++ G L + CLI+P Y+
Sbjct: 66 ISRAQMKLRIMVKNKKFMKGEKDXTPM-------LGTIXSKDNIEGDLEIXCLIEPECYK 118
Query: 361 EIDELVRTETRGQGTLELLNL 381
E+ E+++ + G++E++++
Sbjct: 119 ELIEMIK---KMDGSVEVIDM 136
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 34/48 (70%)
Query: 400 KDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 447
K++ I+S KC+N +TK+ + +MIE LK++ +++ +N+K +ALE
Sbjct: 6 KEVLNIISTKCVNPKTKKRYPPTMIEKALKELKYNMTNARNAKTKALE 53
>gi|147919677|ref|YP_686579.1| putative RNA-associated protein [Methanocella arvoryzae MRE50]
gi|110621975|emb|CAJ37253.1| conserved hypothetical protein [Methanocella arvoryzae MRE50]
Length = 231
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 14/200 (7%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+++L VF+N S+G +EDL KAF T EI + I+ +GE+ ++ ++R IE
Sbjct: 39 IEDILAVEDVFSNASRGDRVPEEDLVKAFGTTAVFEIARKIITEGEINLTAEQRHRMIEE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + + +S IN +T P IE +++ +++ K+ ++ V+ ++ +
Sbjct: 99 KRRQVVSFISRNAINPQTMTPHPPQRIERAMEEAGVHIDLTKSVEENVNIVMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKE-----KLVKCATSVENEEWSGGGLLL-ICLIDPGKY 359
I ++++ V++ G + E KL+K +EW G + + I G
Sbjct: 159 IRFEEVKIAVKIP-GTYAPRAFGEITSFGKLIK-------DEWQNNGTWIGVIQIPAGMQ 210
Query: 360 REIDELVRTETRGQGTLELL 379
E +LV ++G+ +LL
Sbjct: 211 PEFYDLVNKLSKGEAETKLL 230
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + N + R+K G+ FEI + + I+++L VF+N S+G +E
Sbjct: 2 VTLDNAVVARLKTHGEHFEILVDPDGAQELKRGAPIKIEDILAVEDVFSNASRGDRVPEE 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL KAF T EI + I+
Sbjct: 62 DLVKAFGTTAVFEIARKII 80
>gi|124027454|ref|YP_001012774.1| putative RNA-associated protein [Hyperthermus butylicus DSM 5456]
gi|123978148|gb|ABM80429.1| universally conserved uncharacterized protein family UPF0023
[Hyperthermus butylicus DSM 5456]
Length = 237
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 79/134 (58%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++++ + V+T++ +G A+ E L+K F T+D +I I+ +GELQ++ ++R IE
Sbjct: 43 LEDMVISDAVYTDLRRGLRASPELLRKVFGTDDVVKIAAEIVRRGELQLTAEQRRRLIEA 102
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I + ++ I+ +TK P + IEA ++Q V+ K+ ++QA ++ + + +
Sbjct: 103 KKKQIISYIARNAIDPKTKLPIPPARIEAAMEQAGVGVDPFKSVEEQAQLIVKAISRIIP 162
Query: 306 IERAQMRVRVEVSA 319
I+ A+ +R+ V
Sbjct: 163 IKIAKALLRIVVPP 176
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 40/68 (58%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+ R++ AGKRFE+ + ++ + +++++ + V+T++ +G A+ E L+K F
Sbjct: 13 VARLEVAGKRFEVLVNPDLAFEYKQGKQVSLEDMVISDAVYTDLRRGLRASPELLRKVFG 72
Query: 78 TEDQTEIC 85
T+D +I
Sbjct: 73 TDDVVKIA 80
>gi|448318334|ref|ZP_21507860.1| RNA-associated protein [Natronococcus jeotgali DSM 18795]
gi|445599358|gb|ELY53393.1| RNA-associated protein [Natronococcus jeotgali DSM 18795]
Length = 241
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + DL+ F+T D EI ++ +GE+QI+ +R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDLETVFDTTDPMEIIPEVIREGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P I+ L++ F+V+ + +QQ E + L+
Sbjct: 97 QERKRKQLIDTITRNAVNPQMDNAPHPPERIDNALEEAGFTVDPMEPVQQQVDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + K ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQIPAEHAGSAQAK---IREFGDLEREEWQADGSWIGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E + V + G+ EL+ K+
Sbjct: 214 EFYDTVNEHSSGEAETELVKDKD 236
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGDFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+ F+T D EI ++
Sbjct: 62 SDLETVFDTTDPMEIIPEVI 81
>gi|284161626|ref|YP_003400249.1| hypothetical protein Arcpr_0510 [Archaeoglobus profundus DSM 5631]
gi|284011623|gb|ADB57576.1| Shwachman-Bodian-Diamond syndrome protein [Archaeoglobus profundus
DSM 5631]
Length = 235
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L +E D +++L VF + KG+ +KE+L KAF T D I + I+M+GE+QI+ +
Sbjct: 31 LKEGKEVDFEQLLAVEEVFKDAKKGERVSKEELTKAFGTADVRVIARKIIMEGEVQITAE 90
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R +E + + I + ++ T P IE L+Q +++ K + Q +++
Sbjct: 91 QRKEMLEQKRRQIVEYLRRNAVDPRTGAPHPPQRIEMALEQAKVHIDIFKPVEAQIKDIV 150
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVEN---EEWSGGGLLLICLI 354
LK + MR E+ +K + K + S N EEW G IC++
Sbjct: 151 KALKPILP-----MRFE-EIEIAIKIPPEYTGKAISALYSFGNVIKEEWQRDG-SWICVM 203
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R++K G+ FE+ + E D +++L VF + KG+ +KE
Sbjct: 2 VSLEKAVIARLRKGGEVFEVLVDPYLARDLKEGKEVDFEQLLAVEEVFKDAKKGERVSKE 61
Query: 71 DLKKAFNTEDQTEICKLILM 90
+L KAF T D I + I+M
Sbjct: 62 ELTKAFGTADVRVIARKIIM 81
>gi|288560611|ref|YP_003424097.1| exosome subunit [Methanobrevibacter ruminantium M1]
gi|288543321|gb|ADC47205.1| exosome subunit [Methanobrevibacter ruminantium M1]
Length = 234
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 90/182 (49%), Gaps = 7/182 (3%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E DI+E+L +F + KG A++E ++K F+T D E+ + IL KG +Q++ ++R
Sbjct: 38 KEIDIEEILAVEEIFKDSKKGDKASEESMRKVFDTTDVLEVAEQILHKGNVQLTAEQRRQ 97
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E++ K + ++ + IN +T P IE + + ++ K+ +Q + +K
Sbjct: 98 MQEDKRKQVVAKIAREGINPQTGLPHPAVRIENAMNESKVKIDAFKSVDEQVQTTLKAIK 157
Query: 302 QCMSI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKY 359
+ I E+ +M VR+ +A ++ ++ NEEW G + + PG
Sbjct: 158 VLIPIKFEKIKMAVRLPSTAAGNGYSA-----IRPFGTILNEEWQQDGSWIAIVEMPGGL 212
Query: 360 RE 361
++
Sbjct: 213 QD 214
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNI---EKDIDEVLQTHTVFTNVSKGQAA 67
+ + + I R++ G++FEI + +RN E DI+E+L +F + KG A
Sbjct: 2 VNIDDAIIARLESYGEKFEILVDPDLAADFRNPDNEKEIDIEEILAVEEIFKDSKKGDKA 61
Query: 68 NKEDLKKAFNTEDQTEICKLILMK 91
++E ++K F+T D E+ + IL K
Sbjct: 62 SEESMRKVFDTTDVLEVAEQILHK 85
>gi|448328342|ref|ZP_21517654.1| RNA-associated protein [Natrinema versiforme JCM 10478]
gi|445615866|gb|ELY69504.1| RNA-associated protein [Natrinema versiforme JCM 10478]
Length = 241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF + S+G + DL+K F+T + EI ++ +GE+QI+ +R
Sbjct: 37 EGDLEDVIAAEDVFEDASRGDRPAEADLEKVFDTTEPLEIIPEVIKQGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F+V+ + ++Q + + L+
Sbjct: 97 QEQKRKQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQEQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ V V V A + K ++ +E EEW G G + L P G
Sbjct: 157 PIIPIRFEEVTVAVNVPADHAGSAQAK---IRQFGDLEREEWQGDGSWIGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ + V T G+ E++ K+
Sbjct: 214 DFYDTVNEHTSGEAETEIVKDKD 236
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R+ E D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALDIKRDEFEGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T + EI ++
Sbjct: 62 ADLEKVFDTTEPLEIIPEVI 81
>gi|45357813|ref|NP_987370.1| RNA-associated protein [Methanococcus maripaludis S2]
gi|340623431|ref|YP_004741884.1| putative RNA-associated protein [Methanococcus maripaludis X1]
gi|45047373|emb|CAF29806.1| conserved hypothetical protein [Methanococcus maripaludis S2]
gi|339903699|gb|AEK19141.1| putative RNA-associated protein [Methanococcus maripaludis X1]
Length = 234
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I E+L TV+ + KG+ ++ L K F T + EI + IL KG +Q++ +R E
Sbjct: 39 ISEILAAETVYKDSGKGEKVPEDVLLKIFETLNPLEIAEQILKKGTVQLTANQRKEIQEL 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +I+S+ IN +T P IE +++ SV++ K++++Q ++I L++ +
Sbjct: 99 KRKQIVSIISKNTINPQTDTPHPPKRIENAMEEARLSVDIYKSAEEQIPKIIKELRKLLP 158
Query: 306 I--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ L E + + EEW G G L++ + P
Sbjct: 159 IKFEKRDVAVKILGEFAANAYHTLHE-----YGATKQEEWLGDGSLVLVIEIP 206
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + N I R++ G++FEI ++ I E+L TV+ + KG+ ++
Sbjct: 2 VSLDNAVIARLQSHGEKFEILVDPYLAAKFKEGQPIGISEILAAETVYKDSGKGEKVPED 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
L K F T + EI + IL K
Sbjct: 62 VLLKIFETLNPLEIAEQILKK 82
>gi|119719496|ref|YP_919991.1| putative RNA-associated protein [Thermofilum pendens Hrk 5]
gi|119524616|gb|ABL77988.1| Shwachman-Bodian-Diamond syndrome protein [Thermofilum pendens Hrk
5]
Length = 235
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++ E+++ ++ + ++G A++ +LKK F T++ + ++IL +GEL ++ ++R IE
Sbjct: 38 NVREIMEGEFIYYDANRGLKASESELKKVFGTDNIYSVAEIILKQGELLLTTEQRRELIE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC- 303
+ + I ++S ++ T P IE L++ S++ K ++ Q +VI L+
Sbjct: 98 QKKRQIIELISRNAVDPRTNAPIPAKRIELALEEARVSIDPFKPAELQVPDVIKALRMTL 157
Query: 304 -MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI 362
M I +A M V + + V K + K + S G L L + G I
Sbjct: 158 PMKIMKAIMAVYIPAAY----VGKAYHAVSKMGKVLRENYRSDGSLDLEIEVPAGLQSSI 213
Query: 363 DELVRTETRGQGTLELLNLKEV 384
E V + T+G G ++L+ ++ V
Sbjct: 214 VEKVASLTKGSGDVKLIRMEPV 235
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 46/74 (62%)
Query: 16 VAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKA 75
++I R+++ GKR+EI K ++N + ++ E+++ ++ + ++G A++ +LKK
Sbjct: 7 LSIARLERGGKRYEIIVDVEKAWLYKNGEKLNVREIMEGEFIYYDANRGLKASESELKKV 66
Query: 76 FNTEDQTEICKLIL 89
F T++ + ++IL
Sbjct: 67 FGTDNIYSVAEIIL 80
>gi|435846874|ref|YP_007309124.1| rRNA metabolism protein, SBDS family [Natronococcus occultus SP4]
gi|433673142|gb|AGB37334.1| rRNA metabolism protein, SBDS family [Natronococcus occultus SP4]
Length = 241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G ++DL+ F T D EI ++ +GE+QI+ +R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAEDDLETVFETTDPLEIIPEVIKEGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P I+ L++ F+V+ + +QQ E + L+
Sbjct: 97 QERKRKQLIDTITRNAVNPQMDNAPHPPERIDNALEEAGFTVDPMEPVQQQVDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + K ++ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQIPAEHAGSAQAK---IREFGELEREEWQADGSWIGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E + V + G+ EL+ K+
Sbjct: 214 EFYDTVNEHSSGEAETELIKDKD 236
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGDFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F T D EI ++
Sbjct: 62 DDLETVFETTDPLEIIPEVI 81
>gi|282165299|ref|YP_003357684.1| hypothetical protein MCP_2629 [Methanocella paludicola SANAE]
gi|282157613|dbj|BAI62701.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 231
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++VL VF N S+G +EDL KAF T + EI + I+ +GE+ ++ +R +E
Sbjct: 39 MEDVLAVEDVFENASRGDRVPEEDLIKAFGTTNVQEIARKIITEGEINLTADQRHRMLEE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + + +S IN +T P + IE +++ ++++K+ ++ + ++ +
Sbjct: 99 KRRQVVSFISRNAINPQTMAPHPPARIERAMEEGGVHIDLSKSVEENVNVAMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I +++V V+V A + ++ V +E + G + + I G E +L
Sbjct: 159 IRFEEVKVAVKVPANY--AARAFGEIAAFGKMVRDEWQNDGSWIGVVQIPAGMQPEFYDL 216
Query: 366 VRTETRGQGTLELL 379
V ++G+ +LL
Sbjct: 217 VNKLSKGEAETKLL 230
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + ++K G+ FEI ++ + +++VL VF N S+G +E
Sbjct: 2 VTLDKAVVAKLKTHGEHFEILVDPDRAYDLKKGAPVRMEDVLAVEDVFENASRGDRVPEE 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL KAF T + EI + I+
Sbjct: 62 DLIKAFGTTNVQEIARKII 80
>gi|150403172|ref|YP_001330466.1| putative RNA-associated protein [Methanococcus maripaludis C7]
gi|150034202|gb|ABR66315.1| Shwachman-Bodian-Diamond syndrome protein [Methanococcus
maripaludis C7]
Length = 234
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I EVL V+ + KG+ ++ L K F T + EI + IL KG +Q++ +R E
Sbjct: 39 ISEVLAAEAVYKDSGKGEKVPEDLLLKIFETLNPLEIAEQILKKGTVQLTANQRKEIQEQ 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +++S+ IN +T P IE +++ SV++ K++++Q ++I L++ +
Sbjct: 99 KRKQIVSLISKNTINPQTDTPHPPKRIENAMEEARISVDIYKSAEEQIPKIIKELRKLLP 158
Query: 306 I--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ L E + + EEW G G L++ + P
Sbjct: 159 IKFEKRDVAVKIPGEFAANAYHTLHE-----YGATKQEEWMGDGSLVLVIEIP 206
>gi|448358194|ref|ZP_21546879.1| RNA-associated protein [Natrialba chahannaoensis JCM 10990]
gi|445646765|gb|ELY99749.1| RNA-associated protein [Natrialba chahannaoensis JCM 10990]
Length = 241
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF N S+G ++DL+ F+T D EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEDVIAAEDVFENASRGDRPAEDDLETVFDTTDPLEIIPEVVTEGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ +N + P IE L++ F+V+ + + Q E + L+
Sbjct: 99 QKRKQLINTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMETVESQVDEALDDLRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V++ A + + V+ +E EEW G + + P G E
Sbjct: 159 IPIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQPDGSWIGVVTFPAGMQNEF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V + G+ EL+ K+
Sbjct: 216 YDVVNEHSSGKAETELIKDKD 236
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRDEFDGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T D EI ++
Sbjct: 62 DDLETVFDTTDPLEIIPEVV 81
>gi|320101501|ref|YP_004177093.1| Ribosome maturation protein SBDS [Desulfurococcus mucosus DSM 2162]
gi|319753853|gb|ADV65611.1| Ribosome maturation protein SBDS [Desulfurococcus mucosus DSM 2162]
Length = 231
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 102/199 (51%), Gaps = 8/199 (4%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
IDE + V+ + KG A+ E +++ F T+D + I+ +GELQ++ ++R +E
Sbjct: 37 IDEAIAGDFVYKDARKGLKASPESMREVFGTDDPRTVALEIVKRGELQLTTEQRRKLLEE 96
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ I +++ ++ +TK P + +E ++Q +++ K ++QQ ++ L + +
Sbjct: 97 KKAQILNLIARNAVDPKTKLPIPLKRLELAMEQARVTIDPYKPAEQQMEHIVSQLAKVIP 156
Query: 306 IE--RAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYREI 362
I+ +A + VR+ K +K L+ V + +W G L + L I G +E+
Sbjct: 157 IKVAKAYVAVRIPSEHAGKALKPLQSFGVS-----KKVQWREDGSLYMELEIPAGLQQEL 211
Query: 363 DELVRTETRGQGTLELLNL 381
+ V T+G G +++L++
Sbjct: 212 IDRVNALTKGSGEVKILSI 230
>gi|383319307|ref|YP_005380148.1| rRNA metabolism protein, SBDS family [Methanocella conradii HZ254]
gi|379320677|gb|AFC99629.1| rRNA metabolism protein, SBDS family [Methanocella conradii HZ254]
Length = 231
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++VL VF N S+G +EDL KAF T EI + I+ +GE+ ++ ++R E
Sbjct: 39 MEDVLAVEDVFENASRGDRVPEEDLIKAFGTTSVPEIARKIIREGEINLTAEQRHRMQEE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + + +S IN +T P + IE +++ +++ K+ ++ V+ ++ +
Sbjct: 99 KRRQVVSFISRNAINPQTMTPHPPARIERAMEEAGVHIDLTKSVEENVNVVMKAIRPVIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I ++++ V+V A + ++ K V++E + G + + I G E +L
Sbjct: 159 IRFEEVKIAVKVPASY--AARAFGEVSKFGRLVKDEWQNDGSWIGVVQIPAGMQPEFYDL 216
Query: 366 VRTETRGQGTLELL 379
V ++G+ LL
Sbjct: 217 VNRLSKGEAETRLL 230
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R+K G FEI K + + +++VL VF N S+G +E
Sbjct: 2 VTLDKAVVARLKTHGGHFEILVDPEKAYELKKGADVKMEDVLAVEDVFENASRGDRVPEE 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL KAF T EI + I+
Sbjct: 62 DLIKAFGTTSVPEIARKII 80
>gi|303390438|ref|XP_003073450.1| putative exosome subunit [Encephalitozoon intestinalis ATCC
50506]
gi|303302596|gb|ADM12090.1| putative exosome subunit [Encephalitozoon intestinalis ATCC
50506]
Length = 223
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP NQ ++ NV+++ ++K G+++E+ Y NK+ +RN + + E+L T T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSVIALRKFGRKYELGVYPNKLYEYRNGMATPLSEILLTDTIYRSVSK 60
Query: 64 GQAANKEDL 72
G+ A + DL
Sbjct: 61 GEIAKQADL 69
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP NQ ++ NV+++ ++K G+++E+ Y NK+ +RN + + E+L T T++ +VSK
Sbjct: 1 MFTPLNQKKLVNVSVIALRKFGRKYELGVYPNKLYEYRNGMATPLSEILLTDTIYRSVSK 60
Query: 156 GQAANKEDL 164
G+ A + DL
Sbjct: 61 GEIAKQADL 69
>gi|167044507|gb|ABZ09182.1| putative uncharacterized protein family UPF0023 [uncultured marine
crenarchaeote HF4000_APKG6J21]
Length = 232
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 184 KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQI 243
KDI VL + ++ N SKG A E L+KAF T+D I + IL KG+L ++ ++R
Sbjct: 38 KDISSVLVSDEIYQNSSKGTRAPSEKLQKAFKTDDALIIAEKILQKGDLNLTTEQRRKMT 97
Query: 244 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K I T +++ ++ + P IE + S++ KN +Q +++ L+
Sbjct: 98 TEKRKQIITFIAKTFVDPRSHLPHPPIRIEQAMTDARVSIDPFKNVDEQIKDIVENLRSI 157
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE-- 361
+ ++ + +E+S + V K ++K ++ E+W G L L P R
Sbjct: 158 IPLKSENL--LLEISVPAQYVAK-SYSVLKSTGILKKEDWQKDGSLKAILEIPAAARPNV 214
Query: 362 IDELVRTETRGQGTLELL 379
ID L T+G +E+L
Sbjct: 215 IDRLGAI-TKGTAFVEVL 231
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+V+ G++FEI + + ++ KDI VL + ++ N SKG A E L+KAF
Sbjct: 10 VVKYTFEGEKFEILVKPDPALDYKLGKIKDISSVLVSDEIYQNSSKGTRAPSEKLQKAFK 69
Query: 78 TEDQTEICKLILMK 91
T+D I + IL K
Sbjct: 70 TDDALIIAEKILQK 83
>gi|167044151|gb|ABZ08833.1| putative uncharacterized protein family UPF0023 [uncultured marine
crenarchaeote HF4000_APKG5E24]
Length = 232
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 6/198 (3%)
Query: 184 KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQI 243
KDI VL + ++ N SKG A E L+KAF T+D I + IL KG+L ++ ++R
Sbjct: 38 KDISSVLVSDEIYQNSSKGTRAPSEKLQKAFKTDDALIIAEKILQKGDLNLTTEQRRKMT 97
Query: 244 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K I T +++ ++ + P IE + S++ KN +Q +++ L+
Sbjct: 98 TEKRKQIITFIAKTFVDPRSHLPHPPIRIEQAMTDARVSIDPFKNVDEQIKDIVENLRSI 157
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE-- 361
+ ++ + +E+S + V K ++K ++ E+W G L L P R
Sbjct: 158 IPLKSENL--LLEISVPAQYVAK-SYSVLKSTGILKKEDWQKDGSLKAILEIPAAARPNV 214
Query: 362 IDELVRTETRGQGTLELL 379
ID L T+G +E+L
Sbjct: 215 IDRLGAI-TKGTAFVEVL 231
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+V+ G++FEI + + ++ KDI VL + ++ N SKG A E L+KAF
Sbjct: 10 VVKYTFEGEKFEILVKPDPALDYKLGKIKDISSVLVSDEIYQNSSKGTRAPSEKLQKAFK 69
Query: 78 TEDQTEICKLILMK 91
T+D I + IL K
Sbjct: 70 TDDALIIAEKILQK 83
>gi|134046450|ref|YP_001097935.1| putative RNA-associated protein [Methanococcus maripaludis C5]
gi|132664075|gb|ABO35721.1| Shwachman-Bodian-Diamond syndrome protein [Methanococcus
maripaludis C5]
Length = 234
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 3/171 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I EVL V+ + KG+ ++ L K F T + EI + IL KG +Q++ +R E
Sbjct: 39 ISEVLGAEAVYKDSGKGEKVPEDLLLKIFETLNPLEIAEQILKKGTVQLTANQRKEIQEQ 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +I+S+ IN +T P IE +++ SV++ K++++Q ++I L++ +
Sbjct: 99 KRKQIVSIISKNTINPQTDTPHPPKRIENAMEEARLSVDIYKSAEEQIPKIIKELRKLLP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I+ + V V++ + + + + EEW G G L++ + P
Sbjct: 159 IKFEKRDVAVKIPG---EFAGNTYHTLHDYGATKQEEWMGDGSLVLVIEIP 206
>gi|448432345|ref|ZP_21585481.1| RNA-associated protein [Halorubrum tebenquichense DSM 14210]
gi|445687229|gb|ELZ39521.1| RNA-associated protein [Halorubrum tebenquichense DSM 14210]
Length = 241
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 93/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ +F N S+G +EDL+ F T + +I ++ +GE+QI+ ++R+
Sbjct: 37 EGDLEEVIAAEDIFENASRGDRPTEEDLETVFGTTEPLDIIPEVVERGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ + V++ A D + ++ +E EEW + G + + G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGSWVGVLTFSAGLQN 213
Query: 361 EIDELVRTETRGQG 374
E+ +LV T G+G
Sbjct: 214 ELYDLVNEVTSGEG 227
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ +F N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDIFENASRGDRPTE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F T + +I ++ +
Sbjct: 62 EDLETVFGTTEPLDIIPEVVER 83
>gi|448473348|ref|ZP_21601490.1| RNA-associated protein [Halorubrum aidingense JCM 13560]
gi|445818860|gb|EMA68709.1| RNA-associated protein [Halorubrum aidingense JCM 13560]
Length = 241
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ ++++V+ VF N S+G +EDL+ F T D I ++ +GE+QI+ ++R
Sbjct: 37 DGELEDVIAAEDVFENASRGDRPAEEDLETVFGTTDPLAIIPEVVERGEIQITAEQREEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 LERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQLDPMEPVENQVDDALEALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A D + V+ +E EEW G + L P G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQVREFGDLEREEWQNDGSWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
E+ +LV T G+G
Sbjct: 214 ELYDLVNEVTSGEG 227
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R + ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFDGELEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F T D I ++ +
Sbjct: 62 EDLETVFGTTDPLAIIPEVVER 83
>gi|448301363|ref|ZP_21491356.1| RNA-associated protein [Natronorubrum tibetense GA33]
gi|445584099|gb|ELY38423.1| RNA-associated protein [Natronorubrum tibetense GA33]
Length = 241
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D++EV+ VF + S+G +EDL+K F T D EI ++ +GE+QI+ +R E
Sbjct: 39 DLEEVIAAEDVFEDASRGDRPAEEDLEKVFETTDPLEIIPDVIKQGEIQITADQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + + ++ +N + P IE L++ F+V+ + +QQ + + L+
Sbjct: 99 QKRRQLIDTITRNAVNPQMDNAPHPPDRIENALEEAGFTVDPMEPVEQQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + ++ A + K V+ +E EEW G + + P G +
Sbjct: 159 IPIRFEEVTIAAQIPAEYAGSAQAK---VRQFGDLEREEWQPDGSWIGVVTFPAGMQNDF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V + G+ E++ K+
Sbjct: 216 FDVVNEHSSGKAETEIIKDKD 236
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R+ + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALSIKRDEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDL+K F T D EI ++
Sbjct: 62 EDLEKVFETTDPLEIIPDVI 81
>gi|397775146|ref|YP_006542692.1| ribosome maturation protein SBDS-like protein [Natrinema sp. J7-2]
gi|397684239|gb|AFO58616.1| ribosome maturation protein SBDS-like protein [Natrinema sp. J7-2]
Length = 241
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + DL+ F+T D EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPAESDLETVFDTTDPLEIIPEVITRGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ +N + P IE L++ F+V+ + ++Q + + L+ +
Sbjct: 100 KRKQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQEQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ V V+V A + K ++ +E EEW G + L P G E
Sbjct: 160 PIRFEEVTVAVQVPADHAGSAQAK---IRQFGDLEREEWQNDGSWIGVLTFPAGLQNEFY 216
Query: 364 ELVRTETRGQGTLELLNLKE 383
+ V T GQ E++ K+
Sbjct: 217 DTVNEHTSGQAETEIVKDKD 236
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R+ + ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALSIKRDEFDGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+ F+T D EI ++ +
Sbjct: 62 SDLETVFDTTDPLEIIPEVITR 83
>gi|448343948|ref|ZP_21532865.1| RNA-associated protein [Natrinema gari JCM 14663]
gi|445622031|gb|ELY75496.1| RNA-associated protein [Natrinema gari JCM 14663]
Length = 241
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + DL+ F+T D EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPAESDLETVFDTTDPLEIIPEVITRGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ +N + P IE L++ F+V+ + ++Q + + L+ +
Sbjct: 100 KRKQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQEQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ V V+V A D + ++ +E EEW G + L P G E
Sbjct: 160 PIRFEEVTVAVQVPA---DHAGSAQSKIRQFGDLEREEWQNDGSWIGVLTFPAGLQNEFY 216
Query: 364 ELVRTETRGQGTLELLNLKE 383
+ V T GQ E++ K+
Sbjct: 217 DTVNEHTSGQAETEIVKDKD 236
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R+ + ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALSIKRDEFDGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+ F+T D EI ++ +
Sbjct: 62 SDLETVFDTTDPLEIIPEVITR 83
>gi|21228723|ref|NP_634645.1| RNA-associated protein [Methanosarcina mazei Go1]
gi|452211128|ref|YP_007491242.1| Shwachman-Bodian-Diamond syndrome protein [Methanosarcina mazei
Tuc01]
gi|20907232|gb|AAM32317.1| hypothetical protein MM_2621 [Methanosarcina mazei Go1]
gi|452101030|gb|AGF97970.1| Shwachman-Bodian-Diamond syndrome protein [Methanosarcina mazei
Tuc01]
Length = 230
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E +++++L T+F + ++G A + D+ +F T D EI +IL GELQ++ ++R
Sbjct: 36 EVNLEDILAVETIFEDANRGDRAAESDIINSFETTDPFEIAAVILKSGELQLTAEQRKRM 95
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + +S IN +T+ P + IE +++ ++ K+ Q + ++
Sbjct: 96 LEEKKKKVIYTISRNAINPQTRAPHPPARIERAMEEAKVHIDPLKSVDQLVAITMKAIRP 155
Query: 303 CMSIERAQMRVRVEVSA-----GVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDP 356
+ I ++ + V++ D+ K A ++ EEW G + + I
Sbjct: 156 LIPIRFEEISIAVKIPPEYAPKAYGDISK--------AGTITKEEWQRDGSWIAVVRIPA 207
Query: 357 GKYREIDELVRTETRGQGTLELL 379
G + L+ T+G+ +LL
Sbjct: 208 GVQTDFYALINHLTKGEAQTKLL 230
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 20 RMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 79
R+K+ K FE+ ++++ E +++++L T+F + ++G A + D+ +F T
Sbjct: 11 RLKRGSKHFEVLVEPEGALAYKRGEEVNLEDILAVETIFEDANRGDRAAESDIINSFETT 70
Query: 80 DQTEICKLIL 89
D EI +IL
Sbjct: 71 DPFEIAAVIL 80
>gi|20093822|ref|NP_613669.1| RNA-associated protein [Methanopyrus kandleri AV19]
gi|19886745|gb|AAM01599.1| Predicted exosome subunit [Methanopyrus kandleri AV19]
Length = 240
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 172 MLNISSLTSFREK---DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILM 228
+++ FRE D++E+L VF + KG+ A+++ +++ F T D ++ ++++
Sbjct: 24 LVDPEGARKFREGEDVDVEEILAVEQVFRDARKGERASEQAMEELFGTSDPIKVAEIVIK 83
Query: 229 KGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKN 288
+GE+Q++ ++R E + I I++ + ++ T P IE +++ ++ K+
Sbjct: 84 EGEIQLTAEQRRRMQEEVKRKIIHIIARRAVDPRTGAPHPPERIERAMEEAGVHIDPMKS 143
Query: 289 SKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGL 348
+++Q +VI L+ + ++ +++V + + A +V+ +E EEW G
Sbjct: 144 AEEQVKDVIKQLRPVLPMKFEEVKVAIRIPAKYTGQAM---GVVREFGDIEREEWQYDGA 200
Query: 349 LLICLIDP 356
+ + P
Sbjct: 201 WVAVVRLP 208
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 46/80 (57%)
Query: 10 QIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
++ + + + R++K G+RFE+ +R + D++E+L VF + KG+ A++
Sbjct: 3 RVSLEDAVVARLEKGGERFEVLVDPEGARKFREGEDVDVEEILAVEQVFRDARKGERASE 62
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+ +++ F T D ++ ++++
Sbjct: 63 QAMEELFGTSDPIKVAEIVI 82
>gi|383625345|ref|ZP_09949751.1| putative RNA-associated protein [Halobiforma lacisalsi AJ5]
gi|448700325|ref|ZP_21699433.1| RNA-associated protein [Halobiforma lacisalsi AJ5]
gi|445779865|gb|EMA30780.1| RNA-associated protein [Halobiforma lacisalsi AJ5]
Length = 241
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF + S+G + DL+K F+T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFEDASRGDRPAESDLEKVFDTTDPLEIIPEVIKEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 97 QEQKRRQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ V V+V A + K ++ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTVAVQVPADYAGSAQAK---IRQFGDLEREEWQPDGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ ++V + G+ E++ K+
Sbjct: 214 DFYDVVNEHSSGEAETEIVKDKD 236
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R E D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALEIKRGEFEGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T D EI ++
Sbjct: 62 SDLEKVFDTTDPLEIIPEVI 81
>gi|52549119|gb|AAU82968.1| hypothetical protein GZ24D9_12 [uncultured archaeon GZfos24D9]
Length = 230
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++ L +FT+ SKG+ A DL F+T D EI + I+ +GE+Q++ +R ++E
Sbjct: 38 EVGSALAADEIFTDASKGEKATDGDLMDVFSTTDVVEIAERIIKEGEVQLTAAQRRKKVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ IN +TK P T + I+ + + ++ K+ + E + ++ +
Sbjct: 98 EKRKMVIDQIARISINPQTKTPHTPTRIDIAMTEAKVHIDPFKSVDELVNETVKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ + + +++ A ++ E +K SV EEW G G + + P R DE
Sbjct: 158 PIKIEESEIAIKIPAAY--TGRVYE--LKGNYSVIKEEWQGDGSFVAVVKIPAGMR--DE 211
Query: 365 L 365
L
Sbjct: 212 L 212
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 34/79 (43%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R K K FE R+ + ++ L +FT+ SKG+ A
Sbjct: 2 VSLDKAVVARYKHGKKNFETLVDPELAYQIRSGGKGEVGSALAADEIFTDASKGEKATDG 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL F+T D EI + I+
Sbjct: 62 DLMDVFSTTDVVEIAERII 80
>gi|333986693|ref|YP_004519300.1| hypothetical protein MSWAN_0459 [Methanobacterium sp. SWAN-1]
gi|333824837|gb|AEG17499.1| Shwachman-Bodian-Diamond syndrome protein [Methanobacterium sp.
SWAN-1]
Length = 231
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 12/194 (6%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+E+L VF + KG A++E + KAFNT D E I+ KG +Q++ ++R E
Sbjct: 38 DIEEILAVEEVFKDSKKGDKASEEAMMKAFNTIDPLEAAVTIIKKGHVQLTAQQRKEMQE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I ++ + IN +TK P IE + + V+ K+ +Q V+ ++ +
Sbjct: 98 EKRKLIIATITRESINPQTKLPHPARRIEIAMDECRIHVDPFKSVDEQVKTVMKAIRTKI 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGK-----Y 359
I ++RV + + D ++ + EEW G + + PG Y
Sbjct: 158 PIRFEKVRVAIRIPG---DFTGKVYGVIPEFGKTKREEWQKDGSWVAVVEIPGGLQDSFY 214
Query: 360 REIDELVRTETRGQ 373
++ EL T+GQ
Sbjct: 215 TKLSEL----TKGQ 224
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + I R++ G+ FEI + +++ + DI+E+L VF + KG A++E
Sbjct: 2 VTLEDAVIARLEYYGEHFEILVDPDLASDFKDGKKIDIEEILAVEEVFKDSKKGDKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+ KAFNT D E I+ K
Sbjct: 62 AMMKAFNTIDPLEAAVTIIKK 82
>gi|315427139|dbj|BAJ48754.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
gi|315427158|dbj|BAJ48772.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
gi|343485773|dbj|BAJ51427.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 232
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 80/162 (49%), Gaps = 3/162 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I ++L VF + KG A++ +LKK F T D + + I+ +GE+ I+ ++R IE
Sbjct: 40 ITKILAYEEVFKDWKKGVRASESELKKNFGTTDVRVVAEKIMAEGEVLITTEQRRRLIEE 99
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + I ++ I+ T P IE L+Q+ SV + K +AL+ + L++ +
Sbjct: 100 KKRQIIDFIARNAIDPRTNTPHPPQRIELALEQVGLSVEPFADPKVEALKAVEKLRRVLP 159
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I+ M+V + V+ + L++ ++ E W G G
Sbjct: 160 IKIGNMKVEIRVAG---EFMGKVYGLIRSMGTMLEEGWLGDG 198
>gi|399574581|ref|ZP_10768340.1| Ribosome maturation protein SBDS-like protein [Halogranum salarium
B-1]
gi|399240413|gb|EJN61338.1| Ribosome maturation protein SBDS-like protein [Halogranum salarium
B-1]
Length = 241
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ ++++V+ VF + S+G + DL+K F T D EI ++ +GE+QI+ ++R
Sbjct: 37 DGELEDVIAAEDVFEDASRGDRPAESDLEKVFGTTDPMEIIPEVVKRGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L+Q F ++ + Q + + L+
Sbjct: 97 QEQKRKQLINKIARNAVNPQMDDAPHPPDRIERALEQAGFKIDPMETVDSQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYR 360
+ I A++ + V + A + + V+ +E EEW+ GG + + G
Sbjct: 157 PVIPIRFAEVTIAVNLPAQYAGSAQAR---VRTFGELEREEWTNDGGWVGVMTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E +LV T G+ ++ K+
Sbjct: 214 EFYDLVNDLTSGEAETRIVKDKD 236
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALAMKRDEFDGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F T D EI ++
Sbjct: 62 SDLEKVFGTTDPMEIIPEVV 81
>gi|389860733|ref|YP_006362973.1| ribosome maturation protein SBDS [Thermogladius cellulolyticus
1633]
gi|388525637|gb|AFK50835.1| ribosome maturation protein SBDS [Thermogladius cellulolyticus
1633]
Length = 226
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 107/201 (53%), Gaps = 10/201 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++D++L ++ + KG A+ E L++ F T+D +I I+ +GE+Q++ ++R +E
Sbjct: 31 NVDDLLVGDFIYKDARKGLKASPESLREVFKTDDVRQIALEIVRRGEIQLTAEQRRKFVE 90
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I T++S+ ++ +TK P IE ++Q S++ K + Q E++ + + +
Sbjct: 91 EKKKQIITLISKNAVDPKTKLPIPQKRIELAIEQAKVSIDPFKPPEAQMEEILSKIARVI 150
Query: 305 SIE--RAQMRVRVEVS-AGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYR 360
I+ +A + VR+ AG K+ + + + V+ W G LL+ + I G +
Sbjct: 151 PIKIAKAYLSVRIPPEYAG-----KIHKPITQLG-EVKKSTWMNDGSLLMEIEIPAGMQQ 204
Query: 361 EIDELVRTETRGQGTLELLNL 381
E + V + T+G ++++++
Sbjct: 205 EFIDKVNSLTKGTAQVKIISV 225
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 37/68 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
IVR+++ G RFE+ + + + ++D++L ++ + KG A+ E L++ F
Sbjct: 2 IVRLEEKGHRFEVLVNPDLALKVKEGKPVNVDDLLVGDFIYKDARKGLKASPESLREVFK 61
Query: 78 TEDQTEIC 85
T+D +I
Sbjct: 62 TDDVRQIA 69
>gi|167044978|gb|ABZ09643.1| putative uncharacterized protein family UPF0023 [uncultured marine
crenarchaeote HF4000_APKG8G2]
Length = 232
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 6/198 (3%)
Query: 184 KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQI 243
KDI VL + ++ N SKG A E L+KAF T+D I + IL KG+L ++ ++R
Sbjct: 38 KDISSVLVSDEIYQNSSKGTRAPSEKLQKAFKTDDALIIAEKILQKGDLNLTTEQRRKMT 97
Query: 244 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K I T +++ ++ + P IE + S++ KN ++Q +++ ++
Sbjct: 98 TEKRKQIITFIAKTFVDPRSHLPHPPIRIEQAMTDARVSIDPFKNVEEQIKDIVEHVRSI 157
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE-- 361
+ ++ + +E+S + V K ++K ++ E+W G L L P R
Sbjct: 158 IPLKSENL--LLEISVPAQYVAK-SYSVLKSTGILKKEDWQKDGSLKAILEIPAAARPNV 214
Query: 362 IDELVRTETRGQGTLELL 379
ID L T+G +E+L
Sbjct: 215 IDRLGAI-TKGTAFVEVL 231
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+V+ G++FEI + + ++ KDI VL + ++ N SKG A E L+KAF
Sbjct: 10 VVKYTFEGEKFEILVKPDPALDYKLGKIKDISSVLVSDEIYQNSSKGTRAPSEKLQKAFK 69
Query: 78 TEDQTEICKLILMK 91
T+D I + IL K
Sbjct: 70 TDDALIIAEKILQK 83
>gi|294495469|ref|YP_003541962.1| ribosome maturation protein SBDS [Methanohalophilus mahii DSM 5219]
gi|292666468|gb|ADE36317.1| Ribosome maturation protein SBDS [Methanohalophilus mahii DSM 5219]
Length = 230
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 94/194 (48%), Gaps = 2/194 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
++ +L +F++ KG A + D+ +F T+D E+ I+M GELQ++ ++R +E
Sbjct: 39 LETILAVEDIFSDAKKGDHAAESDIINSFGTDDVYEVAGNIIMHGELQLTQEQRKHFLEE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K + +I++ IN +T+ P I +++ ++ K+ +Q V+ ++ +
Sbjct: 99 KTKQVVSIIARNAINPQTRAPHPPGRIRTAMEEAKVHIDPLKSVDEQVKIVMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I+ ++ ++V++ K ++ T V+++ + G + + G + L
Sbjct: 159 IKFEEVDIKVQIPPSY--AAKSYGEIANFGTLVKDKWENDGSWTAVVRMPAGLQNDFYGL 216
Query: 366 VRTETRGQGTLELL 379
+ T+G ELL
Sbjct: 217 INRLTKGDAETELL 230
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + I R+KK FE+ + +R + ++ +L +F++ KG A +
Sbjct: 2 VSLDEALIARLKKGNNHFEVLVDPDGAFDYRQGEDVKLETILAVEDIFSDAKKGDHAAES 61
Query: 71 DLKKAFNTEDQTEICKLILM 90
D+ +F T+D E+ I+M
Sbjct: 62 DIINSFGTDDVYEVAGNIIM 81
>gi|159905090|ref|YP_001548752.1| putative RNA-associated protein [Methanococcus maripaludis C6]
gi|159886583|gb|ABX01520.1| Shwachman-Bodian-Diamond syndrome protein [Methanococcus
maripaludis C6]
Length = 234
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I EVL V+ + KG+ ++ L K F T + EI + IL KG +Q++ +R E
Sbjct: 39 ISEVLAAEAVYKDSGKGEKVPEDLLLKIFETLNPLEIAEQILKKGTVQLTANQRKEIQEQ 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K I +++S+ IN +T P IE +++ SV++ K++++Q ++I L++ +
Sbjct: 99 KRKQIVSLISKNTINPQTDTPHPPKRIENAMEEARLSVDIYKSAEEQIPKIIKELRKLLP 158
Query: 306 I--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+ + V++ L E + + E W G G L++ + P
Sbjct: 159 IKFEKRDVAVKIPGEFAANAYHTLHE-----YGATKQEAWMGDGSLVLVIEIP 206
>gi|432328763|ref|YP_007246907.1| rRNA metabolism protein, SBDS family [Aciduliprofundum sp.
MAR08-339]
gi|432135472|gb|AGB04741.1| rRNA metabolism protein, SBDS family [Aciduliprofundum sp.
MAR08-339]
Length = 232
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 119/270 (44%), Gaps = 48/270 (17%)
Query: 103 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 162
+R+ + I R + AG RFEI D D + +
Sbjct: 2 VRLEDAIIARYEHAGHRFEILV--------------DPDAI------------------D 29
Query: 163 DLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEI 222
D+K TN+++ IDE+ F + KG A++E +K+ F T D E+
Sbjct: 30 DIKSGKITNIVDYMV--------IDEI------FKDAHKGDRASEELVKEVFGTTDVNEV 75
Query: 223 CKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 282
+ I++KG++Q++ ++R +E++ + I ++ IN +T P IE +++
Sbjct: 76 ARQIILKGQVQLTTEQRRKMLEDKKRRIIMEIARNAINPQTGAPHPPQRIELAMEEAKVH 135
Query: 283 VNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEE 342
++ K+ + Q V+ L+ + I ++++ V+VS + K+ +L K T ++ E
Sbjct: 136 IDPLKSVEAQVPIVLKALRPIIPIRFEKLKIAVKVSGDM--YGKIYGELSKMGTLLQEEW 193
Query: 343 WSGGGLLLICLIDPGKYREIDELVRTETRG 372
G + + I G E +++ +T G
Sbjct: 194 QKDGSWIGVVEIPAGMQGEFLDMLNKKTHG 223
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+R+ + I R + AG RFEI + + ++ +I + + +F + KG A++E
Sbjct: 2 VRLEDAIIARYEHAGHRFEILVDPDAIDDIKSGKITNIVDYMVIDEIFKDAHKGDRASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFT 98
+K+ F T D E+ + I++K ++ T
Sbjct: 62 LVKEVFGTTDVNEVARQIILKGQVQLTT 89
>gi|305663896|ref|YP_003860184.1| Ribosome maturation protein SBDS [Ignisphaera aggregans DSM 17230]
gi|304378465|gb|ADM28304.1| Ribosome maturation protein SBDS [Ignisphaera aggregans DSM 17230]
Length = 232
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 106/200 (53%), Gaps = 4/200 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E I+EV+ + ++ +V KG A+ +L F T+D +I I+ KGELQ++ ++R
Sbjct: 35 EIPIEEVVISDYIYKDVRKGLKASPNELIDVFGTDDMYKISLEIIKKGELQLTTEQRRQL 94
Query: 243 IENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQ 302
+E + K + ++ I+ +TK P S IE +++ SV++ K+ ++Q +VI + +
Sbjct: 95 LEMKKKQLIYHIARSAIDPKTKTPIPPSRIEKAMEEAKVSVDLYKSIEEQVPQVIKAISK 154
Query: 303 CMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL-IDPGKYRE 361
+ I+ A + ++VS + K+ ++ + V+ W G L+I + I G +
Sbjct: 155 ILPIKIA--KALLQVSIPPEYASKVSNQIRRLG-DVKKSSWLADGSLIIEIEIPAGMQND 211
Query: 362 IDELVRTETRGQGTLELLNL 381
+ E + T+G +++L++
Sbjct: 212 VIEKLNDMTKGNVNVKVLSI 231
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 17 AIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAF 76
I R+ GKRFEI K R E I+EV+ + ++ +V KG A+ +L F
Sbjct: 7 VIARIMIKGKRFEILVDPEKAYRLREGEEIPIEEVVISDYIYKDVRKGLKASPNELIDVF 66
Query: 77 NTEDQTEIC 85
T+D +I
Sbjct: 67 GTDDMYKIS 75
>gi|448501553|ref|ZP_21612255.1| RNA-associated protein [Halorubrum coriense DSM 10284]
gi|445694984|gb|ELZ47097.1| RNA-associated protein [Halorubrum coriense DSM 10284]
Length = 241
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ ++++V+ VF N S+G +EDL+ F T D I ++ +GE+QI+ ++R+
Sbjct: 37 DGELEDVIAAEDVFENASRGDRPAEEDLETVFGTTDPLSIIPEVVERGEIQITAEQRAEM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + T ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QERKHNQLVTTITRNAVNPQMDDSPHPPERIERALEEAGFQIDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ + V++ A D + ++ +E EEW + GG + + G
Sbjct: 157 PVIPIRFEEVTMAVQLPA---DYAGSGQAQIREFGDLEREEWQNDGGWVGVLTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
++ +LV T G+G ++ K+
Sbjct: 214 DLYDLVNEVTSGEGDARVIKDKD 236
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R + ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFDGELEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F T D I ++ +
Sbjct: 62 EDLETVFGTTDPLSIIPEVVER 83
>gi|448420399|ref|ZP_21581146.1| RNA-associated protein [Halosarcina pallida JCM 14848]
gi|445673550|gb|ELZ26110.1| RNA-associated protein [Halosarcina pallida JCM 14848]
Length = 241
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF + S+G +EDL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGELEDVIAAEDVFEDASRGDRPAEEDLETVFGTTDPMEIIPEVVKRGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L+Q F V+ + + Q E + L+
Sbjct: 97 QEQKRKQLINTITRNAVNPQMDNAPHPPDRIERALEQAGFKVDPMETVESQVDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ V V++ A + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFDEVTVAVQIPAQYAGKTQAQ---VREYGDLEREEWQNDGSWVGVITFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E ++V T G+ ++ K+
Sbjct: 214 EFYDMVNDYTSGEAETRIVKDKD 236
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAMKRGEFEGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
EDL+ F T D EI ++ +
Sbjct: 62 EDLETVFGTTDPMEIIPEVVKR 83
>gi|238828085|pdb|2WBM|A Chain A, Crystal Structure Of Mthsbds, The Homologue Of The
Shwachman-Bodian-Diamond Syndrome Protein In The
Euriarchaeon Methanothermobacter Thermautotrophicus
gi|238828086|pdb|2WBM|B Chain B, Crystal Structure Of Mthsbds, The Homologue Of The
Shwachman-Bodian-Diamond Syndrome Protein In The
Euriarchaeon Methanothermobacter Thermautotrophicus
Length = 252
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 94/194 (48%), Gaps = 12/194 (6%)
Query: 181 FREKD----IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISD 236
FR +D +++VL VF + KG A++E ++K F T D E+ +IL +G +Q++
Sbjct: 51 FRREDSDVSVEDVLAVQEVFRDARKGDKASEEAMRKVFETADPLEVTPVILRRGTIQLTA 110
Query: 237 KERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEV 296
++R IE++ I ++ + IN + P IE +++ V+ K +Q V
Sbjct: 111 EQRRQMIEDKRLKIINKIAREAINPQNGLPHPPKRIEKAMEEARVHVDPFKTVDEQVNIV 170
Query: 297 IPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
+ ++ + I+ ++RV +++ ++ ++ + NEEW G + + P
Sbjct: 171 LKAIRTKIPIKFEKVRVAIKIPG---EMAGSAYGVISNFGKITNEEWQNDGSWIAVVEIP 227
Query: 357 GK-----YREIDEL 365
G Y+++ EL
Sbjct: 228 GGLQDSFYQKLSEL 241
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 8 TNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRN-NIEKDIDEVLQTHTVFTNVSKGQA 66
++ + + + I R++ G+RFE+ + +R + + +++VL VF + KG
Sbjct: 19 SHMVSLEDAVIARLESHGERFEVLVDPDLAAEFRREDSDVSVEDVLAVQEVFRDARKGDK 78
Query: 67 ANKEDLKKAFNTEDQTEICKLILMK 91
A++E ++K F T D E+ +IL +
Sbjct: 79 ASEEAMRKVFETADPLEVTPVILRR 103
>gi|448305746|ref|ZP_21495675.1| RNA-associated protein [Natronorubrum sulfidifaciens JCM 14089]
gi|445588204|gb|ELY42450.1| RNA-associated protein [Natronorubrum sulfidifaciens JCM 14089]
Length = 241
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF + S+G + DL+ F T + EI ++ +GE+QI+ +R E
Sbjct: 39 DLEDVIAAEDVFEDASRGDRPAENDLEDVFETTEPLEIIPEVIKRGEIQITADQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ IN + P IE L++ F+V+ + + Q E + L+
Sbjct: 99 QKRKQLIDTIARNAINPQMDNAPHPPERIENALEEAGFTVDPMEPVETQVDEALEALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V++ A D + ++ +E EEW G + L P G E
Sbjct: 159 IPIRFEEVTIAVQIPA---DYAGSAQAQIRGFGDLEREEWQPDGSWIGVLTFPAGMQNEF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V T G E++ K+
Sbjct: 216 YDVVNEHTSGNAETEIVKDKD 236
>gi|324540838|gb|ADY49603.1| Ribosome maturation protein SBDS [Ascaris suum]
Length = 45
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 2 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRN 42
+I TPTN +TNVA+VRMKK GKRFEIACYKNKV++WRN
Sbjct: 3 GRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVVNWRN 43
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 94 SKIFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRN 134
+I TPTN +TNVA+VRMKK GKRFEIACYKNKV++WRN
Sbjct: 3 GRIKTPTNVKLLTNVAVVRMKKCGKRFEIACYKNKVVNWRN 43
>gi|167045222|gb|ABZ09882.1| putative uncharacterized protein family UPF0023 [uncultured marine
crenarchaeote HF4000_APKG8O8]
Length = 229
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 6/198 (3%)
Query: 184 KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQI 243
KDI +L + ++++ SKG A+ E LKKAF TED I + I KG L ++ +R
Sbjct: 35 KDISSILVSDEIYSDSSKGTRASSEKLKKAFKTEDVLVIAEKIFQKGVLNLTTDQRRKMT 94
Query: 244 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K I T +++ ++ + P IE +K +++ K+ ++Q +++ TL+
Sbjct: 95 AEKRKQIITFIAKTFVDPRSHLPHPPLRIEQAMKDASVNIDPFKSVEEQVKDIVETLRSI 154
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE-- 361
+ ++ + + + V A ++K ++ E+W G L L P R
Sbjct: 155 IPLKSENLLLEISVPA---QYVAHSYSVLKSIGVLKKEDWQPNGSLKAILEIPAAARPNV 211
Query: 362 IDELVRTETRGQGTLELL 379
ID L T+G +E++
Sbjct: 212 IDRLGAI-TKGTAFVEVI 228
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
IV+ G +FEI + + ++ KDI +L + ++++ SKG A+ E LKKAF
Sbjct: 7 IVKYSFEGDKFEILVKPDPALDYKLGKIKDISSILVSDEIYSDSSKGTRASSEKLKKAFK 66
Query: 78 TEDQTEICKLILMK 91
TED I + I K
Sbjct: 67 TEDVLVIAEKIFQK 80
>gi|313126632|ref|YP_004036902.1| hypothetical protein Hbor_18900 [Halogeometricum borinquense DSM
11551]
gi|448288903|ref|ZP_21480100.1| RNA-associated protein [Halogeometricum borinquense DSM 11551]
gi|312292997|gb|ADQ67457.1| conserved hypothetical protein TIGR00291 [Halogeometricum
borinquense DSM 11551]
gi|445568687|gb|ELY23268.1| RNA-associated protein [Halogeometricum borinquense DSM 11551]
Length = 241
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D++EV+ VF + S+G + DL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEEVIAAEDVFEDASRGDRPAENDLETVFETTDPMEIIPEVVKRGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F V+ + + Q E + L+
Sbjct: 97 QEQKRKQLINTIARNAVNPQMDNAPHPPERIERALEEAGFKVDPMEKVESQVDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I ++ V V++ A D + V+ +E EEW G
Sbjct: 157 PVIPIRFDEVTVAVQIPA---DYAGKTQAQVREYGDLEREEWQNDG 199
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R E D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALAIKRGEFEGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+ F T D EI ++ +
Sbjct: 62 NDLETVFETTDPMEIIPEVVKR 83
>gi|327400936|ref|YP_004341775.1| hypothetical protein Arcve_1049 [Archaeoglobus veneficus SNP6]
gi|327316444|gb|AEA47060.1| Shwachman-Bodian-Diamond syndrome protein [Archaeoglobus veneficus
SNP6]
Length = 235
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 178 LTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDK 237
L +E D +++L VF + KG + E+L+K F T D EI + I+ +GE+QI+ +
Sbjct: 31 LKEGKEVDFEKLLAAEEVFRDARKGDRVSSEELQKVFGTTDINEIVRTIIEEGEVQITAE 90
Query: 238 ERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVI 297
+R E + K I + ++ T P + IE +++ V++ K + Q +V+
Sbjct: 91 QRKEMQELKRKQIIEFIRRNTVDPRTGTPHPPARIERAMEEAKVHVDIFKPVEAQVKDVV 150
Query: 298 PTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATS---VENEEWS-GGGLLLICL 353
++K+ + + ++ + ++V A + K + S V EEW G + +
Sbjct: 151 KSIKRILPLRFEEIEIAIKVPA------EYTGKAISALYSFGGVTQEEWQKDGSWICVMR 204
Query: 354 IDPGKYREIDELVRTETRGQGTLELLN 380
I G ++ +L+ T+G+ ++L
Sbjct: 205 IPAGMQGDLMDLLAKTTKGEALTKILR 231
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R+KK G+ FE+ + E D +++L VF + KG + E
Sbjct: 2 VSLDKAVVARLKKQGEVFEVLVDPYLARDLKEGKEVDFEKLLAAEEVFRDARKGDRVSSE 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
+L+K F T D EI + I+
Sbjct: 62 ELQKVFGTTDINEIVRTII 80
>gi|289582960|ref|YP_003481426.1| ribosome maturation protein SBDS-like protein [Natrialba magadii
ATCC 43099]
gi|289532513|gb|ADD06864.1| Ribosome maturation protein SBDS-like protein [Natrialba magadii
ATCC 43099]
Length = 241
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++EV+ VF N S+G ++DL+ F+T D EI ++ +GE+QI+ ++R E
Sbjct: 39 ELEEVIAAEDVFENASRGDRPAEDDLETVFDTTDPLEIIPEVVKEGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 99 QKRKQLINTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMETVESQVDDALDDLRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V++ A + + V+ +E EEW G + + P G E
Sbjct: 159 IPIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQPDGSWIGVVTFPAGMQNEF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V + G+ EL+ K+
Sbjct: 216 YDVVNEHSSGKAETELVKDKD 236
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + +++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAMKRDEFDGELEEVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T D EI ++
Sbjct: 62 DDLETVFDTTDPLEIIPEVV 81
>gi|389846880|ref|YP_006349119.1| RNA-associated protein [Haloferax mediterranei ATCC 33500]
gi|448615280|ref|ZP_21664205.1| RNA-associated protein [Haloferax mediterranei ATCC 33500]
gi|388244186|gb|AFK19132.1| putative RNA-associated protein [Haloferax mediterranei ATCC 33500]
gi|445752544|gb|EMA03967.1| RNA-associated protein [Haloferax mediterranei ATCC 33500]
Length = 238
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + DL+K F T D EI ++ KGE+QI+ ++R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPAENDLEKVFGTTDPLEIIPQVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGELEREEWQSDG 199
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALALKRDEFDGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+K F T D EI ++ K
Sbjct: 62 NDLEKVFGTTDPLEIIPQVVKK 83
>gi|448714784|ref|ZP_21702215.1| RNA-associated protein [Halobiforma nitratireducens JCM 10879]
gi|445788429|gb|EMA39143.1| RNA-associated protein [Halobiforma nitratireducens JCM 10879]
Length = 241
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF + S+G + DL+K F+T + EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFEDASRGDRPAENDLEKVFDTTEPLEIIPEVIKEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 97 QEQKRKQLIDTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V+V A D + ++ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTIAVQVPA---DYAGSAQAQIRQFGDLEREEWQPDGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ ++V + G+ E++ K+
Sbjct: 214 DFYDVVNEHSSGEAETEIIKDKD 236
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R+ E D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALDIKRDEFEGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T + EI ++
Sbjct: 62 NDLEKVFDTTEPLEIIPEVI 81
>gi|448621356|ref|ZP_21668331.1| RNA-associated protein [Haloferax denitrificans ATCC 35960]
gi|445755849|gb|EMA07231.1| RNA-associated protein [Haloferax denitrificans ATCC 35960]
Length = 238
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF + S+G + DL++ F T D EI ++ KGE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFEDASRGDRPAENDLEEVFGTTDPLEIIPQVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQNDG 199
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALSIKRGEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL++ F T D EI ++ K
Sbjct: 62 NDLEEVFGTTDPLEIIPQVVKK 83
>gi|408382265|ref|ZP_11179810.1| RNA-associated protein [Methanobacterium formicicum DSM 3637]
gi|407814921|gb|EKF85543.1| RNA-associated protein [Methanobacterium formicicum DSM 3637]
Length = 231
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 179 TSFREKD---IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQIS 235
+ F+ D I+E+L VF + KG A++E + KAF T D E +I+ KG++Q++
Sbjct: 29 SDFKRGDDIQIEEILAVEEVFKDAKKGDKASEEAMNKAFETTDPLEAAVIIIRKGQVQLT 88
Query: 236 DKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 295
++R E++ + + +S + IN +TK P IE +++ ++ K+ +Q
Sbjct: 89 AQQRRDMQEDKRRMVVAKISREAINPQTKLPHPARRIEIAMEEAKVRIDPFKSVDEQVNI 148
Query: 296 VIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLID 355
+ +++ + I +++V + + +D ++ + + ++ EEW G + +
Sbjct: 149 TLKAIRKLIPIRLEKVKVAIHIPG--EDTGRVYGVIPEFGKTI-KEEWQQDGSWVAVVEI 205
Query: 356 PGKYRE 361
PG +E
Sbjct: 206 PGGMQE 211
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
I + N I R++ G+RFEI + ++ + I+E+L VF + KG A++E
Sbjct: 2 ITLENAVIARLEYYGERFEILVDPDLASDFKRGDDIQIEEILAVEEVFKDAKKGDKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+ KAF T D E +I+ K
Sbjct: 62 AMNKAFETTDPLEAAVIIIRK 82
>gi|448603259|ref|ZP_21657080.1| RNA-associated protein [Haloferax sulfurifontis ATCC BAA-897]
gi|445746455|gb|ELZ97917.1| RNA-associated protein [Haloferax sulfurifontis ATCC BAA-897]
Length = 238
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF + S+G + DL++ F T D EI ++ KGE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFEDASRGDRPAENDLEEVFGTTDPLEIIPQVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQNDG 199
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALAIKRGEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL++ F T D EI ++ K
Sbjct: 62 NDLEEVFGTTDPLEIIPQVVKK 83
>gi|73669982|ref|YP_305997.1| RNA-associated protein [Methanosarcina barkeri str. Fusaro]
gi|72397144|gb|AAZ71417.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 230
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 95/201 (47%), Gaps = 14/201 (6%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++++L T+F + ++G A + D+ +F T D +I +IL GELQ++ ++R +E
Sbjct: 38 NLEDILAVETIFEDANRGDRAAESDILNSFETTDPFKIAAVILKSGELQLTAEQRKRMLE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + +S IN +TK P + IE +++ ++ K+ Q + ++ +
Sbjct: 98 EKKKKVIYTISRNAINPQTKAPHPPARIEKAMEEAKVHIDPLKSVDQLVNITMKAIRPLI 157
Query: 305 SIERAQMRVRVEVSA-----GVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGK 358
I ++ + V++ D+ K+ S+ EEW G + + I G
Sbjct: 158 PIRFEEVNIAVKIPPEYAPKAYGDISKI--------GSITKEEWQRDGSWIAVVRIPAGV 209
Query: 359 YREIDELVRTETRGQGTLELL 379
++ L+ T+G+ +LL
Sbjct: 210 QTDLYALINHLTKGEAQTKLL 230
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 39/70 (55%)
Query: 20 RMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 79
R+K+ K FE+ ++++ + +++++L T+F + ++G A + D+ +F T
Sbjct: 11 RLKRGSKHFEVLVEPEGALAYKRGEDVNLEDILAVETIFEDANRGDRAAESDILNSFETT 70
Query: 80 DQTEICKLIL 89
D +I +IL
Sbjct: 71 DPFKIAAVIL 80
>gi|254168311|ref|ZP_04875157.1| conserved hypothetical protein TIGR00291 [Aciduliprofundum boonei
T469]
gi|197622820|gb|EDY35389.1| conserved hypothetical protein TIGR00291 [Aciduliprofundum boonei
T469]
Length = 232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 103 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 162
+R+ + I R + +G RFEI N + NV G+ N
Sbjct: 2 VRLEDAVIARYEHSGHRFEILVDPN---------------------IIDNVKSGKVENVI 40
Query: 163 DLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEI 222
D M+ IDE+ F + KG A++E +K+ F T D E+
Sbjct: 41 DY-------MV------------IDEI------FKDAHKGDRASEELIKEVFGTTDVNEV 75
Query: 223 CKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 282
K I+ KG++Q++ ++R +E + + I ++ IN +T P IE +++
Sbjct: 76 AKEIIKKGQVQLTTEQRRKMLEEKKRRIIAEIARNAINPQTGAPHPPQRIELAMEEAKVH 135
Query: 283 VNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEE 342
++ K+ ++Q V+ L+ + I ++++ ++VS + K+ +L K T ++ E
Sbjct: 136 IDPFKSVEEQVPVVLKALRPIIPIRFEKVKIAIKVSGDM--YGKIYGELSKSGTILQEEW 193
Query: 343 WSGGGLLLICLIDPGKYREIDELVRTETRG 372
G + + I G E +++ +T G
Sbjct: 194 QKDGSWIGVVEIPAGMQGEFLDMLNKKTHG 223
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+R+ + I R + +G RFEI N + + ++ +++ + + +F + KG A++E
Sbjct: 2 VRLEDAVIARYEHSGHRFEILVDPNIIDNVKSGKVENVIDYMVIDEIFKDAHKGDRASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFT 98
+K+ F T D E+ K I+ K ++ T
Sbjct: 62 LIKEVFGTTDVNEVAKEIIKKGQVQLTT 89
>gi|448571328|ref|ZP_21639673.1| RNA-associated protein [Haloferax lucentense DSM 14919]
gi|448596164|ref|ZP_21653504.1| RNA-associated protein [Haloferax alexandrinus JCM 10717]
gi|445722540|gb|ELZ74198.1| RNA-associated protein [Haloferax lucentense DSM 14919]
gi|445741852|gb|ELZ93350.1| RNA-associated protein [Haloferax alexandrinus JCM 10717]
Length = 238
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF + S+G + DL+K F T D EI ++ +GE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFEDASRGDRPAENDLEKVFGTTDPLEIIPEVVKQGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQNDG 199
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALSIKRGEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F T D EI ++
Sbjct: 62 NDLEKVFGTTDPLEIIPEVV 81
>gi|292655498|ref|YP_003535395.1| hypothetical protein HVO_1344 [Haloferax volcanii DS2]
gi|448291929|ref|ZP_21482603.1| RNA-associated protein [Haloferax volcanii DS2]
gi|448562009|ref|ZP_21635142.1| RNA-associated protein [Haloferax prahovense DSM 18310]
gi|448585913|ref|ZP_21648085.1| RNA-associated protein [Haloferax gibbonsii ATCC 33959]
gi|291371002|gb|ADE03229.1| conserved hypothetical protein TIGR00291 [Haloferax volcanii DS2]
gi|445573448|gb|ELY27969.1| RNA-associated protein [Haloferax volcanii DS2]
gi|445720105|gb|ELZ71782.1| RNA-associated protein [Haloferax prahovense DSM 18310]
gi|445725531|gb|ELZ77154.1| RNA-associated protein [Haloferax gibbonsii ATCC 33959]
Length = 238
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF + S+G + DL+K F T D +I ++ KGE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFEDASRGDRPAENDLEKVFGTTDPLQIIPEVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQNDG 199
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALSIKRGEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+K F T D +I ++ K
Sbjct: 62 NDLEKVFGTTDPLQIIPEVVKK 83
>gi|448410503|ref|ZP_21575208.1| RNA-associated protein [Halosimplex carlsbadense 2-9-1]
gi|445671539|gb|ELZ24126.1| RNA-associated protein [Halosimplex carlsbadense 2-9-1]
Length = 241
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF N S+G ++ L++ F T D EI ++ +GE+QI+ ++R E
Sbjct: 40 LEDVIAAEDVFENASRGDRPPEDALEEVFGTTDPLEIIPEVVDRGEIQITAEQRKEMQER 99
Query: 246 QFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+++D+ ++ +N + P IE+ L+Q F V+ + + Q + + L+ +
Sbjct: 100 KYRDLVNRITRNAVNPQMDDAPHPPDRIESALEQADFKVDPMEPVENQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
I ++V ++ A D + V+ +E EEW G
Sbjct: 160 PIRFDTVKVAAQLPA---DYAGSGQAQVREFGDLEREEWQPDG 199
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + ++ R + ++++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLVEPDAALAMKRGEFDGELEDVIAAEDVFENASRGDRPPE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+ L++ F T D EI ++
Sbjct: 62 DALEEVFGTTDPLEIIPEVV 81
>gi|448397980|ref|ZP_21569918.1| RNA-associated protein [Haloterrigena limicola JCM 13563]
gi|445672196|gb|ELZ24773.1| RNA-associated protein [Haloterrigena limicola JCM 13563]
Length = 241
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 96/205 (46%), Gaps = 13/205 (6%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF N S+G + DL+K F+T + EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEDVIAAEDVFENASRGDRPAENDLEKVFDTTEPLEIIPEVIKEGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 99 QKRKQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQAQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGK----- 358
+ I ++ V V+V A + + ++ +E EEW G + L P
Sbjct: 159 IPIRFEEVTVAVQVPAEHAGSAQAQ---IRQFGDLEREEWQNDGSWIGVLTFPAGLQNEF 215
Query: 359 YREIDELVRTETRGQGTLELLNLKE 383
Y E++E T G+ E++ K+
Sbjct: 216 YNEVNEY----TSGEAETEIIKDKD 236
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRDEFDGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T + EI ++
Sbjct: 62 NDLEKVFDTTEPLEIIPEVI 81
>gi|15678712|ref|NP_275828.1| RNA-associated protein [Methanothermobacter thermautotrophicus str.
Delta H]
gi|6647980|sp|O26781.1|SDO1_METTH RecName: Full=Ribosome maturation protein SDO1 homolog
gi|2621770|gb|AAB85190.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 232
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 93/194 (47%), Gaps = 12/194 (6%)
Query: 181 FREKD----IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISD 236
FR +D +++VL VF + KG A++E ++K F T D E+ +IL +G +Q++
Sbjct: 31 FRREDSDVSVEDVLAVQEVFRDARKGDKASEEAMRKVFETADPLEVTPVILRRGTIQLTA 90
Query: 237 KERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEV 296
++R IE++ I ++ + IN + P IE +++ V+ K +Q V
Sbjct: 91 EQRRQMIEDKRLKIINKIAREAINPQNGLPHPPKRIEKAMEEARVHVDPFKTVDEQVNIV 150
Query: 297 IPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
+ ++ + I+ ++RV +++ + ++ + NEEW G + + P
Sbjct: 151 LKAIRTKIPIKFEKVRVAIKIPG---ERAGSAYGVISNFGKITNEEWQNDGSWIAVVEIP 207
Query: 357 GK-----YREIDEL 365
G Y+++ EL
Sbjct: 208 GGLQDSFYQKLSEL 221
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRN-NIEKDIDEVLQTHTVFTNVSKGQAANK 69
+ + + I R++ G+RFE+ + +R + + +++VL VF + KG A++
Sbjct: 2 VSLEDAVIARLESHGERFEVLVDPDLAAEFRREDSDVSVEDVLAVQEVFRDARKGDKASE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
E ++K F T D E+ +IL +
Sbjct: 62 EAMRKVFETADPLEVTPVILRR 83
>gi|336254520|ref|YP_004597627.1| ribosome maturation protein SBDS-like protein [Halopiger
xanaduensis SH-6]
gi|335338509|gb|AEH37748.1| Shwachman-Bodian-Diamond syndrome protein [Halopiger xanaduensis
SH-6]
Length = 241
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++++V+ VF + S+G + DL+K F+T D EI ++ +GE+QI+ +R E
Sbjct: 39 ELEDVIAAEDVFEDASRGDRPAESDLEKVFDTTDPLEIIPKVIKEGEIQITADQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + + ++ +N + P IE L++ F+V+ + + Q + + L+
Sbjct: 99 QKRRQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVESQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ V V++ A + K ++ +E EEW G + L P G E
Sbjct: 159 IPIRFEEVTVAVQIPAEHAGSAQAK---IRQFGELEREEWQSDGSWIGVLTFPAGLQNEF 215
Query: 363 DELVRTETRGQGTLELLNLKE 383
++V T G+ E++ K+
Sbjct: 216 YDVVNEHTSGEAETEIIKDKD 236
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRGEFDGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+K F+T D EI ++
Sbjct: 62 SDLEKVFDTTDPLEIIPKVI 81
>gi|448393335|ref|ZP_21567660.1| RNA-associated protein [Haloterrigena salina JCM 13891]
gi|445663750|gb|ELZ16492.1| RNA-associated protein [Haloterrigena salina JCM 13891]
Length = 241
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G ++DL+ F+T D EI ++ +GE+QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPAEDDLETVFDTTDPLEIIPEVIKEGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L+Q F+V+ + + Q + + L+
Sbjct: 97 QEQKRKQLIDTIARNAVNPQMDNAPHPPERIENALEQAGFTVDPMEPVESQVDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V++ A + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQADGSWVGVITFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ ++V + G+ E++ K+
Sbjct: 214 DFYDVVNEHSSGEAETEIIKDKD 236
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R+ + D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALEIKRDEFDGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T D EI ++
Sbjct: 62 DDLETVFDTTDPLEIIPEVI 81
>gi|91772265|ref|YP_564957.1| RNA-associated protein [Methanococcoides burtonii DSM 6242]
gi|91711280|gb|ABE51207.1| Ancient conserved region within archaeal exosome superoperon,
UPF0023 domain protein [Methanococcoides burtonii DSM
6242]
Length = 230
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I+++L ++F + +G A + DL AF T+D EI I+ GE+Q++ ++R +E
Sbjct: 39 IEDILAVESIFEDSGRGDHAAESDLTNAFQTDDVFEIAAYIIKHGEIQLTKEQRKHILEE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + + ++ IN +T+ P IE +++ ++ K +Q V+ ++ +
Sbjct: 99 KTRQVISTIARNAINPQTRAPHPPGRIEKAMEEAKVHIDPLKGVDEQVNIVMKAIRPIIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDEL 365
I ++ + V++ + + K + K T + + + G + + I G + L
Sbjct: 159 IRFEEVEIAVKIPS--EYAGKSYGDIAKFGTMLRDNWENDGSWVAVVKIPAGMQNDFYGL 216
Query: 366 VRTETRGQGTLELL 379
V T+G +LL
Sbjct: 217 VNHLTKGDAETKLL 230
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 37/72 (51%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+ R+KK K +E+ + + ++ I+++L ++F + +G A + DL AF
Sbjct: 9 VARLKKGSKHYEVLVDPDGALEFKKGGNVKIEDILAVESIFEDSGRGDHAAESDLTNAFQ 68
Query: 78 TEDQTEICKLIL 89
T+D EI I+
Sbjct: 69 TDDVFEIAAYII 80
>gi|448345143|ref|ZP_21534043.1| RNA-associated protein [Natrinema altunense JCM 12890]
gi|445636092|gb|ELY89256.1| RNA-associated protein [Natrinema altunense JCM 12890]
Length = 241
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + DL+ F+T + EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPAESDLETVFDTTEPLEIIPEVIKQGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ +N + P IE L++ F+V+ + ++Q + + L+ +
Sbjct: 100 KRKQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQEQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ V V+V A + K ++ +E EEW G + L P G E
Sbjct: 160 PIRFEEVTVAVQVPADHAGSAQAK---IRQFGDLEREEWQNDGSWIGVLTFPAGLQNEFY 216
Query: 364 ELVRTETRGQGTLELLNLKE 383
+ V T GQ E++ K+
Sbjct: 217 DTVNEHTSGQAETEIVKDKD 236
>gi|433591739|ref|YP_007281235.1| rRNA metabolism protein, SBDS family [Natrinema pellirubrum DSM
15624]
gi|448334066|ref|ZP_21523250.1| RNA-associated protein [Natrinema pellirubrum DSM 15624]
gi|448382200|ref|ZP_21561956.1| RNA-associated protein [Haloterrigena thermotolerans DSM 11522]
gi|433306519|gb|AGB32331.1| rRNA metabolism protein, SBDS family [Natrinema pellirubrum DSM
15624]
gi|445620794|gb|ELY74282.1| RNA-associated protein [Natrinema pellirubrum DSM 15624]
gi|445662033|gb|ELZ14807.1| RNA-associated protein [Haloterrigena thermotolerans DSM 11522]
Length = 241
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++++V+ VF + S+G + DL+K F+T + EI ++ +GE+QI+ +R E
Sbjct: 39 ELEDVIAAEDVFEDASRGDRPAEADLEKVFDTTEPLEIIPEVIKEGEIQITADQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + + ++ +N + P IE L++ +V+ + +QQ + + L+
Sbjct: 99 QKRRQLIDTITRNAVNPQMDNAPHPPERIENALEEAGVTVDPMEPVEQQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ V V V A + K ++ +E EEW G + L P G E
Sbjct: 159 IPIRFEEVTVAVNVPADYAGSAQAK---IRQFGDLEREEWQSDGSWIGVLTFPAGMQNEF 215
Query: 363 DELVRTETRGQGTLELLNLK 382
+LV T G+ E++ K
Sbjct: 216 YDLVNEHTSGEAETEIVKDK 235
>gi|255513307|gb|EET89573.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 228
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+ KD VL +F + KG+ +E +KKAF T D + IL KG++ I+ ++++
Sbjct: 33 KRKDPMSVLDAEEIFKDARKGERQGEEKIKKAFGTTDMATVVDHILKKGDVPITTEQKNR 92
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+E + K I I++ I+ T P +E + + S++ K +Q V+ +
Sbjct: 93 LMEEKRKQIIDIIARNSIDPRTNAPTPALRVENAMNEARVSIDPFKGPNEQVEAVVKKIS 152
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCAT-----SVENEEW-SGGGLLLICLID 355
+ I+ A++++ V + + +C +++EEW S G L +
Sbjct: 153 LILPIKFAKIKINVNIPPEYSN---------RCYGILKQYGLKSEEWLSNGSLSAVVEFP 203
Query: 356 PGKYREIDELVRTETRGQGTLELL 379
G E E + T+G+ ++L
Sbjct: 204 AGMQTEFYEKINNATQGRAETKIL 227
>gi|254169367|ref|ZP_04876196.1| conserved hypothetical protein TIGR00291 [Aciduliprofundum boonei
T469]
gi|289595862|ref|YP_003482558.1| ribosome maturation protein SBDS-like protein [Aciduliprofundum
boonei T469]
gi|197621686|gb|EDY34272.1| conserved hypothetical protein TIGR00291 [Aciduliprofundum boonei
T469]
gi|289533649|gb|ADD07996.1| Ribosome maturation protein SBDS-like protein [Aciduliprofundum
boonei T469]
Length = 232
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 116/270 (42%), Gaps = 48/270 (17%)
Query: 103 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 162
+R+ + I R + +G RFEI N + +V G+ N
Sbjct: 2 VRLEDAVIARYEHSGHRFEILVDPN---------------------IIDDVKSGKVENVI 40
Query: 163 DLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEI 222
D M+ IDE+ F + KG A++E +K+ F T D E+
Sbjct: 41 DY-------MV------------IDEI------FKDAHKGDRASEELIKEVFGTTDVNEV 75
Query: 223 CKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFS 282
K I+ KG++Q++ ++R +E + + I ++ IN +T P IE +++
Sbjct: 76 AKEIIKKGQVQLTTEQRRKMLEEKKRRIIAEIARNAINPQTGAPHPPQRIELAMEEAKVH 135
Query: 283 VNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEE 342
++ K+ ++Q V+ L+ + I ++++ ++VS + K+ +L K T ++ E
Sbjct: 136 IDPFKSVEEQVPVVLKALRPIIPIRFEKVKIAIKVSGDM--YGKIYGELSKSGTILQEEW 193
Query: 343 WSGGGLLLICLIDPGKYREIDELVRTETRG 372
G + + I G E +++ +T G
Sbjct: 194 QKDGSWIGVVEIPAGMQGEFLDMLNKKTHG 223
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+R+ + I R + +G RFEI N + ++ +++ + + +F + KG A++E
Sbjct: 2 VRLEDAVIARYEHSGHRFEILVDPNIIDDVKSGKVENVIDYMVIDEIFKDAHKGDRASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKIFT 98
+K+ F T D E+ K I+ K ++ T
Sbjct: 62 LIKEVFGTTDVNEVAKEIIKKGQVQLTT 89
>gi|52550030|gb|AAU83879.1| conserved hypothetical protein [uncultured archaeon GZfos34H10]
Length = 230
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 6/181 (3%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++ L +FTNVSKG+ A DL AF+T + EI + I+ +GE+Q++ +R ++E
Sbjct: 38 EVEPALAADEIFTNVSKGEKATDGDLMTAFSTTNVVEIAERIIKEGEVQLTAAQRKKKVE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ IN +TK P T + IE + + ++ K+ + E + ++ +
Sbjct: 98 EKRKMVIDQIARISINPQTKTPHTPTRIEIAMTEAKVHIDPFKSVDELVNETVKAIRPII 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ + + +++ A ++ E +K SV EEW G G + + P R DE
Sbjct: 158 PIKIEESEIAIKIPAAY--TARVYE--LKGNYSVIKEEWQGDGSFVAVVKIPAGMR--DE 211
Query: 365 L 365
L
Sbjct: 212 L 212
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R K K FE R+ + +++ L +FTNVSKG+ A
Sbjct: 2 VNLDKAVVARYKHGKKNFETLVDPELAYRIRSEGKGEVEPALAADEIFTNVSKGEKATDG 61
Query: 71 DLKKAFNTEDQTEICKLIL 89
DL AF+T + EI + I+
Sbjct: 62 DLMTAFSTTNVVEIAERII 80
>gi|13541136|ref|NP_110824.1| RNA-associated protein [Thermoplasma volcanium GSS1]
gi|14324523|dbj|BAB59450.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 230
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 88/174 (50%), Gaps = 7/174 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+ L V+ + KG+ A++E LK+AF T D +I I+ KG++Q++ ++R +
Sbjct: 37 DIENDLAMPEVYKDARKGEKASEESLKEAFKTTDIAQIVVDIVKKGQIQLTTEQRREMYD 96
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I I++ + IN +T P T I +++ ++ K++++Q V+ + +
Sbjct: 97 ERRKQIVNIIAREGINPQTNTPHTPYRISQAMEEAKVKIDPFKSAEEQVQGVLKAIMPII 156
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP 356
I E+A++ V++ A KL +L K + EEW G + L P
Sbjct: 157 PIRFEKAKLAVKLVGDA----YGKLYGELAKSGY-ITKEEWGKDGSWMGILEVP 205
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWR-NNIEKDIDEVLQTHTVFTNVSKGQAANK 69
+R+ + + R++ G +FEI + + R NI DI+ L V+ + KG+ A++
Sbjct: 2 VRVEDAIVARLESHGYKFEILVDPDAIERIRKGNI--DIENDLAMPEVYKDARKGEKASE 59
Query: 70 EDLKKAFNTEDQTEICKLILMKDMSKIFT 98
E LK+AF T D +I I+ K ++ T
Sbjct: 60 ESLKEAFKTTDIAQIVVDIVKKGQIQLTT 88
>gi|429962979|gb|ELA42523.1| hypothetical protein VICG_00275 [Vittaforma corneae ATCC 50505]
Length = 249
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+F P NQ ++TNV+IV +KK +++EIA Y NK+ +R+N + + +L + ++ NVS
Sbjct: 1 MFLPENQKKLTNVSIVALKKFDRKYEIAVYPNKLYEYRHNCKIPLSAILHSENIYRNVST 60
Query: 64 GQAANKEDLKKAFNTE 79
G+ ++ DL +++E
Sbjct: 61 GEVCSESDLALFYSSE 76
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+F P NQ ++TNV+IV +KK +++EIA Y NK+ +R+N + + +L + ++ NVS
Sbjct: 1 MFLPENQKKLTNVSIVALKKFDRKYEIAVYPNKLYEYRHNCKIPLSAILHSENIYRNVST 60
Query: 156 GQAANKEDLKKAFNT 170
G+ ++ DL +++
Sbjct: 61 GEVCSESDLALFYSS 75
>gi|448612812|ref|ZP_21662692.1| RNA-associated protein [Haloferax mucosum ATCC BAA-1512]
gi|445739709|gb|ELZ91215.1| RNA-associated protein [Haloferax mucosum ATCC BAA-1512]
Length = 238
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++ V+ VF + S+G + DL+K F T D EI ++ KGE+QI+ +R
Sbjct: 37 DGDLEAVIAAEDVFEDASRGDRPAENDLEKVFGTTDPMEIIPEVVKKGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRRSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQSDG 199
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D++ V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALAIKRDEFDGDLEAVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+K F T D EI ++ K
Sbjct: 62 NDLEKVFGTTDPMEIIPEVVKK 83
>gi|68065005|ref|XP_674486.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56493089|emb|CAH95281.1| conserved hypothetical protein [Plasmodium berghei]
Length = 534
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 68/109 (62%), Gaps = 5/109 (4%)
Query: 222 ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF 281
+C L L G LQIS++ER+ E +KDI ++ E +N +T P + +MIE+ +K + +
Sbjct: 5 LCFLSL--GTLQISNRERAILKEKIYKDIIEMLHEMSVNPQTGYPLSTNMIESMIKNVGY 62
Query: 282 SVNVNKNSKQQALEVIPTLKQCMS--IERAQMRVRVEVSAGVK-DVKKL 327
S+N++ ++K+QAL+V L + I+RA MR+++ +K DV KL
Sbjct: 63 SINIDDSTKKQALKVFELLHKEYEDVIQRAFMRIQIICDDFIKNDVIKL 111
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 374 GTLELLNLKEVTEGEEERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHF 433
GTL++ N ER+ E +KDI ++ E +N +T P + +MIE+ +K + +
Sbjct: 11 GTLQISN--------RERAILKEKIYKDIIEMLHEMSVNPQTGYPLSTNMIESMIKNVGY 62
Query: 434 SVNVNKNSKQQAL 446
S+N++ ++K+QAL
Sbjct: 63 SINIDDSTKKQAL 75
>gi|448339140|ref|ZP_21528171.1| RNA-associated protein [Natrinema pallidum DSM 3751]
gi|445621111|gb|ELY74597.1| RNA-associated protein [Natrinema pallidum DSM 3751]
Length = 241
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 5/200 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + DL+ F+T + EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPAESDLETVFDTTEPLEIIPEVIKQGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + + ++ +N + P IE L++ F+V+ + ++Q + + L+ +
Sbjct: 100 KRRQLIDTITRNAVNPQMDNAPHPPERIENALEEAGFTVDPMEPVQEQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ V V+V A + K ++ +E EEW G + L P G E
Sbjct: 160 PIRFEEVTVAVQVPADHAGSAQAK---IRQFGDLEREEWQNDGSWIGVLTFPAGLQNEFY 216
Query: 364 ELVRTETRGQGTLELLNLKE 383
+ V T GQ E++ K+
Sbjct: 217 DTVNEHTSGQAETEIVKDKD 236
>gi|300711229|ref|YP_003737043.1| Ribosome maturation protein SBDS-like protein [Halalkalicoccus
jeotgali B3]
gi|448296669|ref|ZP_21486723.1| RNA-associated protein [Halalkalicoccus jeotgali B3]
gi|299124912|gb|ADJ15251.1| Ribosome maturation protein SBDS-like protein [Halalkalicoccus
jeotgali B3]
gi|445580962|gb|ELY35328.1| RNA-associated protein [Halalkalicoccus jeotgali B3]
Length = 241
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D++EV+ VF N S+G + DL+ F T D EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEEVIAAEEVFENASRGDRPAETDLEDVFETTDPLEIIPEVIRRGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + + ++ +N + P IE+ L++ F ++ + +QQ + + L+
Sbjct: 99 QKRRQLINRIARNAVNPQMDNAPHPPDRIESALEETDFRIDAMEPVEQQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ V V++ A + + V+ ++ EEW G + L P G +
Sbjct: 159 IPIRFDEVIVAVQIPAEHAGSAQAQ---VRQFGDLKREEWQNDGSWVGVLEFPAGMQNDF 215
Query: 363 DELVRTETRG 372
+LV T G
Sbjct: 216 YDLVNEHTSG 225
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + D++EV+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKREEFDGDLEEVIAAEEVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL+ F T D EI ++ +
Sbjct: 62 TDLEDVFETTDPLEIIPEVIRR 83
>gi|110668426|ref|YP_658237.1| RNA-associated protein [Haloquadratum walsbyi DSM 16790]
gi|109626173|emb|CAJ52629.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 241
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ DI++V+ VF N ++G +EDLK F T + I ++ GE+QI+ ++R
Sbjct: 37 DDDIEDVIAAEDVFENAARGDRPAEEDLKAVFETTEPLSIIPTVVKDGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F V+ + + Q + + L+
Sbjct: 97 QEQKRKQLINQIARNAVNPQMDNAPHPPERIERALEEAGFRVDPMEPVESQIDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ V V+V A D K + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFDEVTVAVQVPAS--DAGKTQAQ-VREYGDLEREEWQPDGSWVGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
+ +LV T G+ +L K+
Sbjct: 214 DFYDLVNELTSGEAETRILKNKD 236
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + + R+ + DI++V+ VF N ++G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALEMKRDEFDDDIEDVIAAEDVFENAARGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDLK F T + I ++
Sbjct: 62 EDLKAVFETTEPLSIIPTVV 81
>gi|448541121|ref|ZP_21623952.1| RNA-associated protein [Haloferax sp. ATCC BAA-646]
gi|448549506|ref|ZP_21628111.1| RNA-associated protein [Haloferax sp. ATCC BAA-645]
gi|448555381|ref|ZP_21631421.1| RNA-associated protein [Haloferax sp. ATCC BAA-644]
gi|445708283|gb|ELZ60123.1| RNA-associated protein [Haloferax sp. ATCC BAA-646]
gi|445712554|gb|ELZ64335.1| RNA-associated protein [Haloferax sp. ATCC BAA-645]
gi|445718126|gb|ELZ69829.1| RNA-associated protein [Haloferax sp. ATCC BAA-644]
Length = 238
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D++EV+ VF + S+G + DL+ F T D EI ++ +GE+QI+ ++R
Sbjct: 37 DGDLEEVIAAEDVFEDASRGDRPAENDLETVFGTTDPLEIIPEVVKQGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 QEQKRKSLINRIARNAVNPQMNDSPHPPERIERALEEAGFKIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIRFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQNDG 199
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S R + D++EV+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALSIKRGEFDGDLEEVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
DL+ F T D EI ++
Sbjct: 62 NDLETVFGTTDPLEIIPEVV 81
>gi|123461301|ref|XP_001316820.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121899537|gb|EAY04597.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 257
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 178 LTSFREK--DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQIS 235
+T +RE + E L TV+ N SKG+ A + DL K Q + +LI+ KG+ ++
Sbjct: 27 VTKYREDQCSLKEALIDDTVWANSSKGEVAAQADLAK-LGCSGQA-LLELIMKKGKYSLT 84
Query: 236 DKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 295
+E+ +E + + E I ++ P V IE LK++ ++++ K+++ A
Sbjct: 85 AQEKREIVEKLHNQVVNFIHENFIEPSSRTPHPVVRIENALKEVKYNLDTEKSAEANARA 144
Query: 296 VIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKE--KLVKCATSVENEEWSGGGLLLICL 353
+IP L + +E + + +V V KL L+ +V EE+
Sbjct: 145 IIPKLMTIIRLEESIIEGQVAVPNA-----KLGPVVGLIYSFCTVRKEEYGPENAYFQVT 199
Query: 354 IDPGKYREIDELVRTETRGQGTLEL 378
I PGK+ + + + + GQ +
Sbjct: 200 ITPGKFDDFNNQISKASGGQAVFSI 224
>gi|284164987|ref|YP_003403266.1| ribosome maturation protein SBDS-like protein [Haloterrigena
turkmenica DSM 5511]
gi|284014642|gb|ADB60593.1| Ribosome maturation protein SBDS-like protein [Haloterrigena
turkmenica DSM 5511]
Length = 241
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 94/200 (47%), Gaps = 5/200 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G ++DL+ F+T D EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPAEDDLETVFDTTDPLEIIPEVIKEGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ +N + P IE L+Q F+V+ + + Q + + L+ +
Sbjct: 100 KRKQLIDTIARNAVNPQMDNAPHPPERIENALEQAGFTVDPMEPVESQVDDALDDLRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ + V++ A + + V+ +E EEW G + + P G +
Sbjct: 160 PIRFEEVTIAVQIPAEYAGSAQAQ---VRQFGDLEREEWQADGSWVGVITFPAGMQNDFY 216
Query: 364 ELVRTETRGQGTLELLNLKE 383
++V + G+ E++ K+
Sbjct: 217 DVVNEHSSGEAETEIIKDKD 236
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + ++++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALAIKRDEFDGELEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T D EI ++
Sbjct: 62 DDLETVFDTTDPLEIIPEVI 81
>gi|448378131|ref|ZP_21560677.1| RNA-associated protein [Halovivax asiaticus JCM 14624]
gi|445654365|gb|ELZ07217.1| RNA-associated protein [Halovivax asiaticus JCM 14624]
Length = 241
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++++V+ VF N S+G + L++ F T D EI ++ +GE+QI+ ++R E
Sbjct: 39 ELEDVIAAEDVFENASRGDRPAESALEEVFETTDPLEIIPEVIERGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K++ T ++ +N + P IE+ L++ F V+ + + Q E + L+
Sbjct: 99 QKRKNLITRITRNAVNPQMDNAPHPPERIESALEEAGFQVDPMEPVEGQVDEALDELRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V + A + K V+ +E EEW G + L P G +
Sbjct: 159 IPIRFEEVTLAVSLPAEYAGSAQAK---VRQFGDLEREEWQADGSWVGVLTFPAGLQNDF 215
Query: 363 DELVRTETRGQG 374
+LV T G+
Sbjct: 216 YDLVNEHTSGEA 227
>gi|325959907|ref|YP_004291373.1| hypothetical protein Metbo_2187 [Methanobacterium sp. AL-21]
gi|325331339|gb|ADZ10401.1| Shwachman-Bodian-Diamond syndrome protein [Methanobacterium sp.
AL-21]
Length = 230
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 98/200 (49%), Gaps = 12/200 (6%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
+++++L +F + KG +++E + KAF T D E+ IL KG++Q++ ++R E
Sbjct: 38 NVEDILVVEEIFKDAKKGDKSSEEAMMKAFQTTDHVEVAANILKKGQIQLTAQQRKEMQE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + T ++ + IN +TK P V IE + + ++ K+ +Q + ++ +
Sbjct: 98 EKRLKVVTTIAREAINPQTKLPHPVRRIEIAMDEAKVRIDPFKSVDEQVNTTLKAIRVKI 157
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGK-----Y 359
I +++V + V K+ + + +++ EEW G + + PG Y
Sbjct: 158 PIRFEKVKVAIRVPGDFSG--KVYGAIPEFGKTMQ-EEWQQDGSWVAVVEIPGGMQDNFY 214
Query: 360 REIDELVRTETRGQGTLELL 379
++++EL T GQ +LL
Sbjct: 215 QKLNEL----THGQVETKLL 230
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 41/81 (50%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + R++ G+ FEI + ++ + +++++L +F + KG +++E
Sbjct: 2 VNLDDAVTARLEYFGEHFEILVDPDLASDFKRGQDINVEDILVVEEIFKDAKKGDKSSEE 61
Query: 71 DLKKAFNTEDQTEICKLILMK 91
+ KAF T D E+ IL K
Sbjct: 62 AMMKAFQTTDHVEVAANILKK 82
>gi|76364263|gb|ABA41645.1| Shwachman-Bodian-Diamond protein-like protein, partial
[Reclinomonas americana]
Length = 243
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 77/149 (51%), Gaps = 4/149 (2%)
Query: 164 LKKAFNTN--MLNISSLTSFREK--DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQ 219
LKK T +++ S+ +RE +D+VL + +F+N SKG A EDL+ AF T+ +
Sbjct: 13 LKKGGKTFELLVHPDSVEPYREGKLSVDQVLVSDEIFSNASKGDRAKAEDLQAAFGTDVK 72
Query: 220 TEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI 279
IL GE Q S +ER +++ + + I ++ ++ +T+ P +E ++
Sbjct: 73 ATCIASILATGEFQQSTEERRRKVDEKRQQIIGYIARNYVDPKTRLPHPAMRVELAFEEA 132
Query: 280 HFSVNVNKNSKQQALEVIPTLKQCMSIER 308
++ +++QA +++ L+ +S +
Sbjct: 133 KPKIDPEVPAERQAPDILKRLQGLLSFAK 161
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 12 RMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKED 71
R +++ V++KK GK FE+ + + V +R + +D+VL + +F+N SKG A ED
Sbjct: 4 RTSDMQTVKLKKGGKTFELLVHPDSVEPYREG-KLSVDQVLVSDEIFSNASKGDRAKAED 62
Query: 72 LKKAFNTE 79
L+ AF T+
Sbjct: 63 LQAAFGTD 70
>gi|84490037|ref|YP_448269.1| RNA-associated protein [Methanosphaera stadtmanae DSM 3091]
gi|84373356|gb|ABC57626.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
Length = 231
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI +V+ VF + K A++E ++KAF T D E+ I+ KG++QI+ ++ E
Sbjct: 38 DISKVIAVEEVFKDAHKADKASEEAMEKAFETTDALEVADKIIHKGQIQITANQKRKMQE 97
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ + IN +TK P I +++ ++ K ++Q + PT+K +
Sbjct: 98 EKTKQVINQIAREAINPQTKLPHPPKRIAKAMEEAKVHIDPMKTVEEQ---IAPTVKAIL 154
Query: 305 S-----IERAQMRVRVEVSAGVKDVKKLKE--KLVKCATSVENEEWSGGGLLLICLIDPG 357
+ IE+ Q+ V++ + K + + KL+K EEW G + + PG
Sbjct: 155 TKIPIRIEKVQVAVKIPGTYAGKGYSTITQYGKLIK-------EEWENDGSWIGIVEIPG 207
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKE 70
+ + + I R+++ G+RFEI ++ + DI +V+ VF + K A++E
Sbjct: 2 VNVDDAVIARLERYGERFEILVDAELAADYKRGEDIDISKVIAVEEVFKDAHKADKASEE 61
Query: 71 DLKKAFNTEDQTEICKLILMKDMSKI 96
++KAF T D E+ I+ K +I
Sbjct: 62 AMEKAFETTDALEVADKIIHKGQIQI 87
>gi|385803889|ref|YP_005840289.1| hypothetical protein Hqrw_2813 [Haloquadratum walsbyi C23]
gi|339729381|emb|CCC40629.1| conserved hypothetical protein [Haloquadratum walsbyi C23]
Length = 241
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ DI++V+ VF N ++G +EDLK F T + I ++ GE+QI+ ++R
Sbjct: 37 DDDIEDVIAAEDVFENAARGDRPAEEDLKAVFETTEPLSIIPTVVKDGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F V+ + + Q + + L+
Sbjct: 97 QEQKRKQLINQIARNAVNPQMDNAPHPPERIERALEEAGFRVDPMEPVESQIDDALDDLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I ++ V V+V A D K + + V+ +E EEW G
Sbjct: 157 PVIPIRFDEVTVAVQVPAS--DAGKTQAQ-VREYGDLEREEWQPDG 199
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + + R+ + DI++V+ VF N ++G +
Sbjct: 2 ISLDEAVTARLESHGERFEVLIDPDAALEMKRDEFDDDIEDVIAAEDVFENAARGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
EDLK F T + I ++
Sbjct: 62 EDLKAVFETTEPLSIIPTVV 81
>gi|448590918|ref|ZP_21650683.1| RNA-associated protein [Haloferax elongans ATCC BAA-1513]
gi|445734414|gb|ELZ85973.1| RNA-associated protein [Haloferax elongans ATCC BAA-1513]
Length = 238
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + DL++ F T D I ++ KGE+QI+ ++R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPAENDLEEVFGTTDPLTIIPEVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ +N + P IE L++ F+++ + + Q + + L+
Sbjct: 97 QEQKRRSLINRIARNAVNPQMNDTPHPPERIERALEEAGFTIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQSDG 199
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R + D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALAIKRGEFDGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL++ F T D I ++ K
Sbjct: 62 NDLEEVFGTTDPLTIIPEVVKK 83
>gi|448575639|ref|ZP_21641919.1| RNA-associated protein [Haloferax larsenii JCM 13917]
gi|445730580|gb|ELZ82168.1| RNA-associated protein [Haloferax larsenii JCM 13917]
Length = 238
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 4/166 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + DL++ F T D I ++ KGE+QI+ ++R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPAENDLEEVFGTTDPLTIIPEVVKKGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ +N + P IE L++ F+++ + + Q + + L+
Sbjct: 97 QEQKRRSLINRIARNAVNPQMNDTPHPPERIERALEEAGFTIDPMEPVESQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I+ A++ V V++ A + + ++ +E EEW G
Sbjct: 157 PVLPIKFAEVTVAVQLPA---EYAGSGQAQIRSYGDLEREEWQSDG 199
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R+ + D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALAIKRDEFDGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL++ F T D I ++ K
Sbjct: 62 NDLEEVFGTTDPLTIIPEVVKK 83
>gi|424819352|ref|ZP_18244461.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4_'5-way FS']
gi|269986358|gb|EEZ92656.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
gi|326422444|gb|EGD71843.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidiphilum ARMAN-4_'5-way FS']
Length = 224
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
R +D+D L VF ++ KG+ A +L+K T+D ++ I+ +GE+Q+S +
Sbjct: 32 RSEDVDSALLVEKVFKDIKKGEVAG--NLQKELGTDDIRKLALKIIKEGEVQLSTAYKQK 89
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+ E K I ++ I+ T P IE ++Q+H + ++NK K Q EV+ LK
Sbjct: 90 KSEMLKKRIVDKIAGMAIDLNTNLPIPKQRIEIAMQQVHHNFDINKPEKDQFEEVLIKLK 149
Query: 302 QCMSIERAQMRVRVEVS 318
+ + I+ + ++V
Sbjct: 150 KILPIKLGEFNYSIDVP 166
>gi|15790325|ref|NP_280149.1| RNA-associated protein [Halobacterium sp. NRC-1]
gi|169236058|ref|YP_001689258.1| RNA-associated protein [Halobacterium salinarum R1]
gi|10580799|gb|AAG19629.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167727124|emb|CAP13910.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 241
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 4/161 (2%)
Query: 188 EVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQF 247
+V+ VF N S+G + DL+ F T + EI ++ +GE+QI+ +R + + +
Sbjct: 42 DVIAARDVFENASRGDRPAESDLETVFGTTEPLEIIPEVIGQGEIQITADQREAMQQRKK 101
Query: 248 KDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSI 306
+ + +S IN + P IE+ L + F+V+ + +Q + + L+ + I
Sbjct: 102 RSLINTISRNAINPQMDGAPHPPDRIESALDEAGFTVDPMTPADEQVDDALEALRPVIPI 161
Query: 307 ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+M V V++ A D + ++ +E EEW G
Sbjct: 162 RFEEMTVAVQLPA---DYAGSGQAKLREFGELEREEWQADG 199
>gi|429193529|ref|YP_007179207.1| rRNA metabolism protein, SBDS family [Natronobacterium gregoryi
SP2]
gi|448323922|ref|ZP_21513366.1| RNA-associated protein [Natronobacterium gregoryi SP2]
gi|429137747|gb|AFZ74758.1| rRNA metabolism protein, SBDS family [Natronobacterium gregoryi
SP2]
gi|445620062|gb|ELY73571.1| RNA-associated protein [Natronobacterium gregoryi SP2]
Length = 241
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 80/164 (48%), Gaps = 4/164 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF + S+G ++DL+ F+T + EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEDVIAAEDVFEDASRGDRPAEDDLETVFDTTEPLEIIPEVITEGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K + ++ IN + P IE L++ F+V+ + + Q + + L+
Sbjct: 99 QKRKQLIDTIARNAINPQMDDAPHPPERIENALEEAGFTVDPMEPVENQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ I ++ V V++ A + + V+ +E EEW G
Sbjct: 159 IPIRFEEVTVAVQIPAEYAGSAQAQ---VRQFGDLEREEWQPDG 199
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R+ + D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALEIKRDEFDGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
+DL+ F+T + EI ++
Sbjct: 62 DDLETVFDTTEPLEIIPEVI 81
>gi|433638747|ref|YP_007284507.1| rRNA metabolism protein, SBDS family [Halovivax ruber XH-70]
gi|433290551|gb|AGB16374.1| rRNA metabolism protein, SBDS family [Halovivax ruber XH-70]
Length = 241
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++++V+ VF N S+G + L++ F T D EI ++ +GE+QI+ ++R E
Sbjct: 39 ELEDVIAAEDVFENASRGDRPAESALEEVFETTDPLEIIPEVIERGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ K++ T ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 99 QKRKNLITRITRNAVNPQMDNAPHPPERIESALEEAGFQVDPMEPVEGQVDDALDELRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V + A + K V+ +E EEW G + L P G +
Sbjct: 159 IPIRFEEVTLAVSLPAEYAGSAQAK---VRQFGDLEREEWQADGSWVGVLTFPAGLQNDF 215
Query: 363 DELVRTETRGQG 374
+LV T G+
Sbjct: 216 YDLVNEHTSGEA 227
>gi|345005746|ref|YP_004808599.1| hypothetical protein [halophilic archaeon DL31]
gi|344321372|gb|AEN06226.1| Shwachman-Bodian-Diamond syndrome protein [halophilic archaeon
DL31]
Length = 241
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ ++++V+ VF N S+G + DL++ F T D EI I+ KGE+QI+ ++R +
Sbjct: 37 DGELEDVIAAEDVFENASRGDRPAETDLEEVFGTTDPMEIIPQIITKGEIQITAEQRKAI 96
Query: 243 IENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 97 KEQKHKALVNQITRNAVNPQMDNAPHPPERIERALEEAGFKIDPMEPVETQVDDALEQLR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + V + + + V+ +E EEW G + + P G
Sbjct: 157 PVIPIRFDEVTIAVNIPPNYAGSTQAQ---VRQFGELEREEWQADGSWIGVVTFPAGMQN 213
Query: 361 EIDELVRTETRGQGTLELLNLKE 383
E +++ +T G+ ++ K+
Sbjct: 214 EFYDMINDKTSGEAETNIVRDKD 236
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + + R++ G+RFE+ + ++ R + ++++V+ VF N S+G +
Sbjct: 2 IPLEDAVTARLESHGERFEVLVDPDAALAIKRGEFDGELEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
DL++ F T D EI I+ K
Sbjct: 62 TDLEEVFGTTDPMEIIPQIITK 83
>gi|320168922|gb|EFW45821.1| hypothetical protein CAOG_03805 [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 7/195 (3%)
Query: 188 EVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQF 247
+VL VF SKG+ AN DL AF TED K+I KG++ + ER + + +
Sbjct: 49 DVLLVDVVFKQFSKGERANAADLAGAFGTEDNDACLKVICEKGQVAETAAERKEKTDKRR 108
Query: 248 KDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIE 307
+I + + + +N P V+ IE L ++ ++ + +QA ++I + + + ++
Sbjct: 109 AEIVSYIHKYYVNPTNNLPHPVTRIELALGEMKPRIDPEVPADRQAHDIIKKMVEIIPLK 168
Query: 308 RAQMRVRVEVSAGVKDVKKLKEKLVKCATSVE--NEEWSGGGLLLICLIDPGKYREIDEL 365
+ +M + + K L + V+ E ++G G + + PG Y
Sbjct: 169 KMEMEGTLFIPH-----KHLGSAMTVVHKWVQKKGETYNGEGCTMEISVVPGDYDSFIAD 223
Query: 366 VRTETRGQGTLELLN 380
+ T+G+ E+
Sbjct: 224 INKATKGEFQFEVFG 238
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+V+ K FE+AC V+ WR E +VL VF SKG+ AN DL AF
Sbjct: 18 LVKYKTGKYAFEVACRPGNVMKWRKG-ELGWSDVLLVDVVFKQFSKGERANAADLAGAFG 76
Query: 78 TEDQTEICKLILMK 91
TED K+I K
Sbjct: 77 TEDNDACLKVICEK 90
>gi|88603529|ref|YP_503707.1| RNA-associated protein [Methanospirillum hungatei JF-1]
gi|88188991|gb|ABD41988.1| Protein of unknown function UPF0023 [Methanospirillum hungatei
JF-1]
Length = 231
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 87/188 (46%), Gaps = 4/188 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
I++ + +F N S+ + A++E LKK F T + I I+ KGE+ ++ ++R
Sbjct: 39 IEDAVAALQIFENASQAERASEESLKKVFKTTEFEPIALHIIRKGEIHLTSEQRKVLTAE 98
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ + + T ++ +N +T P IE +++ ++ ++ ++ + + L+ +
Sbjct: 99 KRRQVITFIARNAVNPQTGHPHPPQRIELAMEEAKVHIDPFRSVEELVKDTMKALRPLIP 158
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWS-GGGLLLICLIDPGKYREIDE 364
I+ ++RV V + D + ++E EEW G + + +I G E +
Sbjct: 159 IKFDEVRVAVRIP---PDYAPRAYGEISAVAAIEKEEWQKDGSWICVVVIPAGIQTEFYD 215
Query: 365 LVRTETRG 372
L+ + G
Sbjct: 216 LINRISHG 223
>gi|424814251|ref|ZP_18239429.1| conserved hypothetical protein TIGR00291 family [Candidatus
Nanosalina sp. J07AB43]
gi|339757867|gb|EGQ43124.1| conserved hypothetical protein TIGR00291 family [Candidatus
Nanosalina sp. J07AB43]
Length = 229
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E +I +L VFT+ S G+ A+ ++L+ FNT+ + + + KGE+Q++ +++
Sbjct: 34 KEYEIQRLLFVQEVFTDASAGERASADELEAEFNTKQIMDAAEEVFEKGEMQLTTDQKAE 93
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E +++ + +++ + N +T P IE L++ F++ + +++ E + LK
Sbjct: 94 MREEKYRQVVNMIARRVQNPQTGNPHPPKRIENALEEAGFNIQAMDDVEEKFDEAVDQLK 153
Query: 302 QCM--SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKY 359
+ S+E M V++ K L++K T +E E+W G + P
Sbjct: 154 PIIPVSLEEKAMAVKIPNDKTGKAYDLLQQK-----TDLEEEKW-GNEYFYAKMTLPAGI 207
Query: 360 REIDELVRTETRGQGTLELLNLKEVTEGE 388
++EL+R +++E T+GE
Sbjct: 208 --LEELMR------------DIQEATDGE 222
>gi|290985967|ref|XP_002675696.1| Shwachman-Bodian-Diamond protein-like protein [Naegleria gruberi]
gi|284089294|gb|EFC42952.1| Shwachman-Bodian-Diamond protein-like protein [Naegleria gruberi]
Length = 250
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 91/189 (48%), Gaps = 7/189 (3%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+D+V+ T +F+N +KG E LK F T + E+ I+ GE +S +ER +++
Sbjct: 36 VDDVIYTDEIFSNYAKGDKVKDESLKAVFGTTNVKEVITKIIADGEYHMSTQERKEKVDQ 95
Query: 246 QFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMS 305
+ K + + + I+ +T ++ IE+ L + ++++ + +Q + L + +
Sbjct: 96 KRKQMIYFIHQNYIDPKTNICHPLTRIESALDSVKYNIDPFMPADKQVASIHSKLVEKIP 155
Query: 306 IERAQMRVRVEVSAGVKDVKKLKEKLVKC--ATSVENEEWSGGGLLLICLIDPGKYREID 363
++++Q+ ++V V + L C V + ++ G + I PG+Y ++
Sbjct: 156 LKKSQIEAEIDVKHHV-----AGQALGTCHKHAKVVGQNYTDTGCTISIEICPGEYDKLI 210
Query: 364 ELVRTETRG 372
+ + T+G
Sbjct: 211 NELNSSTKG 219
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 15 NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKK 74
+ +IV+ KK FE+ N VI+ R + +D+V+ T +F+N +KG E LK
Sbjct: 4 DFSIVKFKKGEATFEVLVKPNTVIAHREG-KMGVDDVIYTDEIFSNYAKGDKVKDESLKA 62
Query: 75 AFNTEDQTEICKLIL 89
F T + E+ I+
Sbjct: 63 VFGTTNVKEVITKII 77
>gi|300701794|ref|XP_002995030.1| hypothetical protein NCER_102238 [Nosema ceranae BRL01]
gi|239603648|gb|EEQ81359.1| hypothetical protein NCER_102238 [Nosema ceranae BRL01]
Length = 206
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP+NQ ++TNV+IV +KK K + I Y NK+ + NNI ++++L + T++ NV
Sbjct: 1 MFTPSNQKKLTNVSIVTLKKFNKIYSIPVYPNKLYEYYNNITP-LNDILISDTIYKNVQT 59
Query: 64 GQAANKEDLKKAFNTEDQTEICKLILM 90
G +KEDL FN +EI K I++
Sbjct: 60 GIKCSKEDL-ALFNLP-HSEIIKEIVL 84
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP+NQ ++TNV+IV +KK K + I Y NK+ + NNI ++++L + T++ NV
Sbjct: 1 MFTPSNQKKLTNVSIVTLKKFNKIYSIPVYPNKLYEYYNNITP-LNDILISDTIYKNVQT 59
Query: 156 GQAANKEDL 164
G +KEDL
Sbjct: 60 GIKCSKEDL 68
>gi|344212045|ref|YP_004796365.1| putative RNA-associated protein [Haloarcula hispanica ATCC 33960]
gi|343783400|gb|AEM57377.1| putative RNA-associated protein [Haloarcula hispanica ATCC 33960]
Length = 241
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + L++ F+T D I ++ +GE+QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPPENMLEEVFDTTDPMAIIPEVIKRGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 97 QEQKHKQLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ V V+V A D + ++ +E EEW S G + + G
Sbjct: 157 PVIPIRFDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELL 379
+ ++V T G+ +++
Sbjct: 214 DFYDVVNEHTSGEAETQII 232
>gi|448687949|ref|ZP_21693917.1| RNA-associated protein [Haloarcula japonica DSM 6131]
gi|445779740|gb|EMA30656.1| RNA-associated protein [Haloarcula japonica DSM 6131]
Length = 242
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + L++ F+T D I ++ +GE+QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPPENMLEEVFDTTDPMAIIPEVIKRGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 97 QEQKHKQLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ V V+V A D + ++ +E EEW S G + + G
Sbjct: 157 PVIPIRFDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELL 379
+ ++V T G+ +++
Sbjct: 214 DFYDVVNEHTSGEAETQII 232
>gi|452822260|gb|EME29281.1| hypothetical protein Gasu_32900 [Galdieria sulphuraria]
Length = 253
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 184 KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQI 243
K +++VL + T+FT+ +K + A +LK AF T+ + IL KGE+QIS ER ++
Sbjct: 30 KSLEDVLLSDTIFTSYAKREKAGTNELKAAFQTDSLQSCVETILQKGEVQISSAERKEKL 89
Query: 244 ENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
E + K+I + + I+ K P +S IE L++ V+ + ++Q +++ L
Sbjct: 90 EKRKKEIVNFIHKYYIDPAKKLPHPMSRIENALEECKIRVDADIPVERQIPDIVSKLVNV 149
Query: 304 MSIERAQMRVRVEVS-AGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREI 362
+ +++ + +++V + + + K V +VE E +S G I PG+Y
Sbjct: 150 IPLKKTTLEGQLKVPHSSIGAASSVIAKYV----TVERESYSSHGCTYDIGIIPGEYDLF 205
Query: 363 DELVRTETRGQGTLELLNLKEVTEGEEERS 392
+ T+G + + + VT G + +
Sbjct: 206 MSEINRVTKGNFEFNVYSQEGVTTGSSQST 235
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+VR + FE+ + V +R K +++VL + T+FT+ +K + A +LK AF
Sbjct: 2 LVRYRVGKTTFELVTKEGTVQKYRKGEIKSLEDVLLSDTIFTSYAKREKAGTNELKAAFQ 61
Query: 78 TEDQTEICKLILMK 91
T+ + IL K
Sbjct: 62 TDSLQSCVETILQK 75
>gi|424811890|ref|ZP_18237130.1| conserved hypothetical protein TIGR00291 family [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756112|gb|EGQ39695.1| conserved hypothetical protein TIGR00291 family [Candidatus
Nanosalinarum sp. J07AB56]
Length = 229
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 90/192 (46%), Gaps = 3/192 (1%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
+E DI +L VFT+ KG A+ E+L+ F T + E + + G++Q++ ++++
Sbjct: 34 QEHDISRLLFVQEVFTDAGKGDRASPEELENEFGTRNVMEAAEQVFASGDMQLTTEQKAE 93
Query: 242 QIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+ +++ + ++S + N T P IE L + +V + + ++ E + LK
Sbjct: 94 MRDEKYRKLVDMISRRAQNPRTGNPHPPQRIENALDETGINVGWDADLNERFEEAVDLLK 153
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYRE 361
+ I + V + + A + K +++ + A +E+E+W + G E
Sbjct: 154 PIIPISLDEKTVALRIPA--DETGKAYDRIQQVA-DIEDEQWKDSYFTARITLPAGVLEE 210
Query: 362 IDELVRTETRGQ 373
+ + ++ T GQ
Sbjct: 211 LRQELQEMTGGQ 222
>gi|428179205|gb|EKX48077.1| hypothetical protein GUITHDRAFT_106155 [Guillardia theta CCMP2712]
Length = 306
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 54/213 (25%)
Query: 110 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 169
+ R+KK G +FE+ C V +R +
Sbjct: 64 LCRLKKGGMQFEVMCLPGMVDKYREGV--------------------------------- 90
Query: 170 TNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 229
++EVL + +F + G + D++KAF D + + +L K
Sbjct: 91 --------------ASMEEVLVSMEMFKDCKTGDRPSTADIEKAFGHSDMGKCIEEVLSK 136
Query: 230 GELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI-HFSVNVNKN 288
GE Q+S ER +++++ K I T + + T +P + +E G++ I ++ ++
Sbjct: 137 GEFQLSAAERKKKVDDKTKQIITYICGNFMEGGTNKPIPAARVENGIQSIKGLKIDPFRS 196
Query: 289 SKQQALEVIPTLKQCMSIERAQMRVRVEVSAGV 321
+ QALE++ LK+ I V+ E+SA V
Sbjct: 197 TDTQALEIVKKLKEMFPI------VKNEISATV 223
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+ R+KK G +FE+ C V +R + ++EVL + +F + G + D++KAF
Sbjct: 64 LCRLKKGGMQFEVMCLPGMVDKYREGV-ASMEEVLVSMEMFKDCKTGDRPSTADIEKAFG 122
Query: 78 TEDQTEICKLILMK 91
D + + +L K
Sbjct: 123 HSDMGKCIEEVLSK 136
>gi|257388446|ref|YP_003178219.1| hypothetical protein Hmuk_2402 [Halomicrobium mukohataei DSM 12286]
gi|257170753|gb|ACV48512.1| Shwachman-Bodian-Diamond syndrome protein [Halomicrobium mukohataei
DSM 12286]
Length = 241
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 89/196 (45%), Gaps = 5/196 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + L + F+T + EI ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPPENSLTEVFDTTEPLEIIPEVIKQGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ + + ++ +N + P IE+ L++ F V+ + Q + + L+ +
Sbjct: 100 KHRQLIQQITRNAVNPQMDDAPHPPDRIESALEETDFRVDPMEPVDNQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREID 363
I ++ V V+V A D + ++ +E EEW G + + P G E
Sbjct: 160 PIRFDEVTVAVQVPA---DYAGAAQSRIRQFGDLEREEWQADGSWIGVITFPAGMQNEFY 216
Query: 364 ELVRTETRGQGTLELL 379
++V T G+ +++
Sbjct: 217 DVVNEHTSGEAETQIV 232
>gi|448666446|ref|ZP_21685091.1| RNA-associated protein [Haloarcula amylolytica JCM 13557]
gi|445771577|gb|EMA22633.1| RNA-associated protein [Haloarcula amylolytica JCM 13557]
Length = 241
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + L++ F+T D I ++ +GE+QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPPENMLEEVFDTTDPMAIIPEVIKRGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 97 QEQKHKQLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ V V+V A D + ++ +E EEW S G + + G
Sbjct: 157 PVIPIRFDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
+ ++V T G+
Sbjct: 214 DFYDVVNEHTSGEA 227
>gi|76802505|ref|YP_327513.1| RNA-associated protein [Natronomonas pharaonis DSM 2160]
gi|76558370|emb|CAI49961.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 241
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 87/192 (45%), Gaps = 5/192 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D+++V+ VF + S G + L++ F T D EI ++ +GE+QI+ ++R E
Sbjct: 39 DLEDVIAAEDVFEDASSGDRPPESALEEVFETTDPLEIIPAVIKRGEIQITAEQRRKMQE 98
Query: 245 NQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + ++ +N + P IE L++ F V+ + + Q E + L+
Sbjct: 99 QKHNQLVNKIARNAVNPQMDDAPHPPERIERALEEAGFQVDPMEPVENQVDEALDDLRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYREI 362
+ I ++ + V+V A D + ++ +++EEW G + L P G E
Sbjct: 159 IPIRFDEVVMAVQVPA---DYAGSAQAQIRQFGELQSEEWQSDGSWVGVLKFPAGLQNEF 215
Query: 363 DELVRTETRGQG 374
+LV T G+
Sbjct: 216 YDLVNEHTSGEA 227
>gi|448733285|ref|ZP_21715530.1| RNA-associated protein [Halococcus salifodinae DSM 8989]
gi|445803019|gb|EMA53319.1| RNA-associated protein [Halococcus salifodinae DSM 8989]
Length = 241
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + D+++ F T + EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDVEEVFGTTEPLEIIPEVIQEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ +N + P IE+ L++ F ++ + Q E + L+
Sbjct: 97 QEQKRRQLINTIARNAVNPQMDGAPHPPDRIESALEETDFRIDPMDTVENQIDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + ++ A D + ++ + EEW G + + P G
Sbjct: 157 PVIPIRFEEVTMAAQIPA---DHAGSAQAQIRQFGDLVREEWQNDGSWIGVVEFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
+ ELV ++ G+G
Sbjct: 214 DFYELVSEQSSGEG 227
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + + R+ E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLIDPDAALEIKRDEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
D+++ F T + EI ++ +
Sbjct: 62 SDVEEVFGTTEPLEIIPEVIQE 83
>gi|76364265|gb|ABA41646.1| Shwachman-Bodian-Diamond protein-like protein, partial [Capsaspora
owczarzaki]
Length = 195
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 188 EVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQF 247
+VL VF SKG+ AN DL AF TED K+I KG++ + ER + + +
Sbjct: 49 DVLLVDVVFKQFSKGERANAADLAGAFGTEDNDACLKVICEKGQVAETAAERKEKTDKRR 108
Query: 248 KDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIE 307
+I + + + +N P V+ IE L ++ ++ + +QA ++I + + + ++
Sbjct: 109 AEIVSYIHKYYVNPTNNLPHPVTRIELALGEMKPRIDPEVPADRQAHDIIKKMVEIIPLK 168
Query: 308 RAQM 311
+ +M
Sbjct: 169 KMEM 172
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 18 IVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFN 77
+V+ K FE+AC V+ WR E +VL VF SKG+ AN DL AF
Sbjct: 18 LVKYKTGKYAFEVACRPGNVMKWRKG-ELGWSDVLLVDVVFKQFSKGERANAADLAGAFG 76
Query: 78 TEDQTEICKLI 88
TED K+I
Sbjct: 77 TEDNDACLKVI 87
>gi|41615307|ref|NP_963805.1| putative RNA-associated protein [Nanoarchaeum equitans Kin4-M]
gi|40069031|gb|AAR39366.1| NEQ524 [Nanoarchaeum equitans Kin4-M]
Length = 226
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
D +++L +F NV G+ ++E LKK F T D I + I+ KG+LQI + + E
Sbjct: 34 DKEKLLLVPEIFRNVKTGERQSEEVLKKVFKTTDVYVIAEQIIKKGQLQIPTEYKRKIKE 93
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ I ++ + I+ T P+T IE +++ ++++ K ++ Q ++ LK+ +
Sbjct: 94 ELKRKIIELIRKNYIDPRTGLPYTYQRIELAMEKAKINIDITKPAEAQLESIVKELKKII 153
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSV-----ENEEWSGGGLLLICLIDPGKY 359
++ ++R+ +++ E + K + + + EE+S ++ L G Y
Sbjct: 154 PLKGEKIRIVIKIP---------NEYIYKAYSYIKSFRPQKEEFSDNYYAILSL-PAGIY 203
Query: 360 REIDELVRTETRGQGTLELL 379
+E E + T G ++ L
Sbjct: 204 QEFIEKIEKLTEGNAEIKEL 223
>gi|424819693|ref|ZP_18244760.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
gi|290559127|gb|EFD92491.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422489|gb|EGD71886.1| Shwachman-Bodian-Diamond syndrome protein [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
Length = 224
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DID L +F ++ KG+ A +L++ T+D I I+ +GE+Q+S + Q +
Sbjct: 35 DIDSALLVDKIFKDIKKGEVAG--NLRRELGTDDIRTIALKIIKEGEIQLSTAYKQKQSQ 92
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
I ++ I+ T P IE ++ +H + ++NK K+Q EV+ LK+ +
Sbjct: 93 MLKNRIIDKIAGMAIDLNTNLPIPRKRIELAMEDVHHNFDINKPEKEQLDEVLLKLKKIL 152
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDE 364
I+ ++ +E+ + L +K T+++N S L++ + G E+
Sbjct: 153 PIKLGELDYTIEIPIQYANDVML---YLKRLTNIKNNTRSDKSLVVNISVKAGNENELMS 209
Query: 365 LVRTETRG 372
+++ T G
Sbjct: 210 KIKSVTHG 217
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDL 72
M + +++K GKR+EI K I RN DID L +F ++ KG+ A +L
Sbjct: 1 MVDRVTAKLEKLGKRYEIEVDCEKAIDIRNGKSSDIDSALLVDKIFKDIKKGEVAG--NL 58
Query: 73 KKAFNTED 80
++ T+D
Sbjct: 59 RRELGTDD 66
>gi|448677564|ref|ZP_21688754.1| RNA-associated protein [Haloarcula argentinensis DSM 12282]
gi|445773239|gb|EMA24272.1| RNA-associated protein [Haloarcula argentinensis DSM 12282]
Length = 242
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 186 IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIEN 245
+++V+ VF + S+G + L++ F+T D I ++ +GE+QI+ +R E
Sbjct: 40 LEDVIAAEDVFEDASRGDRPPENMLEEVFDTTDPMAIIPEVIKRGEIQITADQRREMQEQ 99
Query: 246 QFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K + ++ +N + P IE+ L++ F V+ + + Q + + L+ +
Sbjct: 100 KHKQLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALRPVI 159
Query: 305 SIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREID 363
I ++ V V+V A D + ++ +E EEW S G + + G +
Sbjct: 160 PIRFDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQNDFY 216
Query: 364 ELVRTETRGQGTLELL 379
++V T G+ +++
Sbjct: 217 DVVNEHTSGEAETQII 232
>gi|448728618|ref|ZP_21710941.1| RNA-associated protein [Halococcus saccharolyticus DSM 5350]
gi|445796536|gb|EMA47038.1| RNA-associated protein [Halococcus saccharolyticus DSM 5350]
Length = 241
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF N S+G + D+++ F T + EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFENASRGDRPAESDVEEVFGTTEPLEIIPEVIQEGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + ++ IN + P IE+ L++ F ++ + + Q E + L+
Sbjct: 97 QEQKRRQLINTIARNAINPQMDGAPHPPDRIESALEETDFRIDPMEPVESQIDEALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + ++ A + + ++ + V EEW G + + P G
Sbjct: 157 PVIPIRFEEVTMAAQIPA--EHAGSAQAQIRQFGDLV-REEWQNDGSWIGVVEFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
+ ELV ++ G+G
Sbjct: 214 DFYELVSEQSGGEG 227
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + ++ R E D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALTIKRGEFEGDLEDVIAAEDVFENASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
D+++ F T + EI ++ +
Sbjct: 62 SDVEEVFGTTEPLEIIPEVIQE 83
>gi|335436695|ref|ZP_08559488.1| putative RNA-associated protein [Halorhabdus tiamatea SARL4B]
gi|334897658|gb|EGM35789.1| putative RNA-associated protein [Halorhabdus tiamatea SARL4B]
Length = 241
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF N S+G + L++ F T + EI ++ +GE+QI+ +R
Sbjct: 37 EGELEDVIAAEDVFENASRGDRPPENALEEVFETTEPLEIIPEVIERGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + +++ ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 97 QERKHRELVQRITRNAVNPQMDDAPHPPDRIESALEEAGFQVDPMEPVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPG 357
+ I ++ V V++ D + ++ +E+EEW G + L P
Sbjct: 157 PVIPIRFDEVTVAVQLP---PDYAGSGQAKIREFGDLESEEWQSDGSWVGVLTFPA 209
>gi|257053867|ref|YP_003131700.1| RNA-associated protein [Halorhabdus utahensis DSM 12940]
gi|256692630|gb|ACV12967.1| Shwachman-Bodian-Diamond syndrome protein [Halorhabdus utahensis
DSM 12940]
Length = 241
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF N S+G + L++ F T + EI ++ GE+QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFENASRGDRPPENALEEVFGTTEPLEIIPEVIQDGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + +++ ++ +N + P IE+ L++ F ++ + + Q + + L+
Sbjct: 97 QERKHRELVQRITRNAVNPQMDDAPHPPDRIESALEEAGFQIDPMEPVETQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPG 357
+ I ++ V V++ + K ++ +E+EEW G + L P
Sbjct: 157 PVIPIRFDEVTVAVQLPPDYAGSGQAK---IREFGDLESEEWQSDGSWVGVLTFPA 209
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G+RFE+ + +S R++ + D+++V+ VF N S+G +
Sbjct: 2 ISLDEAVTARLETHGERFEVLVDPDAALSMKRDDFDGDLEDVIAAEDVFENASRGDRPPE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
L++ F T + EI ++
Sbjct: 62 NALEEVFGTTEPLEIIPEVI 81
>gi|71423645|ref|XP_812524.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70877313|gb|EAN90673.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 345
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 12/144 (8%)
Query: 256 EKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTL--KQCMSIERAQMRV 313
+KC+N T+RPF +IE L+ I +V +++ K+QAL I L + + I RA+M++
Sbjct: 1 QKCVNEVTQRPFPSQVIEQALRSIGAAVKLDQPVKKQALAFIHQLIDAKTIPIARARMKL 60
Query: 314 RVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG-------LLLICLIDPGKYREIDELV 366
R V ++KL E K TS+ + GG L+ L+ P +R+I+ V
Sbjct: 61 RCNVP-DEPSLEKLVEWCEKNGTSILQKVVEAGGSDAALQIHSLLILLQPHLFRDIERFV 119
Query: 367 RTETRGQGTLELLN--LKEVTEGE 388
+TE G++ ++ +V EG+
Sbjct: 120 KTEMPPGGSVHVIENAAMDVGEGD 143
>gi|374724591|gb|EHR76671.1| putative exosome subunit / RNA-associated protein [uncultured
marine group II euryarchaeote]
Length = 228
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 3/163 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+ L VF + G+ +E ++ F T+D I IL KG +Q++ +R + +
Sbjct: 39 DINAFLAMDEVFHDARGGERPTEEAIENTFGTQDIRTIATTILSKGSIQLTTNQRKAMVA 98
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC- 303
+ I + + ++ +TK P + IE L + +SV+ K ++Q + I LK
Sbjct: 99 RMRQQIIHQIHVQAVDPKTKSPHPKTRIELALDESRYSVDPFKRLEEQVKDAIDKLKPMI 158
Query: 304 -MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSG 345
+S E ++ RV SA V ++ + +EN W+
Sbjct: 159 PLSFESVRLAFRVPGSA-YGSVSRILRPYQQKEQWLENGTWAA 200
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEK-DIDEVLQTHTVFTNVSKGQAANK 69
+ + N + RM+K GKR+E+ V +++ + DI+ L VF + G+ +
Sbjct: 2 VSLDNAVLARMEKGGKRYEVLVDPELVDTFKADPNAVDINAFLAMDEVFHDARGGERPTE 61
Query: 70 EDLKKAFNTEDQTEICKLILMK 91
E ++ F T+D I IL K
Sbjct: 62 EAIENTFGTQDIRTIATTILSK 83
>gi|183229630|ref|XP_657442.2| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|169803128|gb|EAL52057.2| hypothetical protein EHI_151360 [Entamoeba histolytica HM-1:IMSS]
gi|449706897|gb|EMD46653.1| shwachmanbodian-diamond family protein [Entamoeba histolytica KU27]
Length = 246
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 3/185 (1%)
Query: 200 SKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCI 259
+KG A +L KAF + EI K+I KGE+Q S ER Q+E++ K I + +
Sbjct: 52 NKGNIAKPAELSKAFPGKSGDEILKIIAEKGEIQFSSDERKQQVEDKKKRIVEYIHNYYV 111
Query: 260 NTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSA 319
+ T +P + I L + ++ +++ EV L + +R ++ V V
Sbjct: 112 DPATNKPHPIVRINNALDAMKLVIDPEAPMEKEIKEVEKKLNDILPSKRLEVEAIVTVP- 170
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
D KL + +K + + +G + I PG + +++ + TRG ++L
Sbjct: 171 --NDFCKLADGAMKKYGRITSSSANGNSKVYKVSIIPGDFDSLNKDLAKATRGNYQIDLP 228
Query: 380 NLKEV 384
N + V
Sbjct: 229 NGQTV 233
>gi|448627226|ref|ZP_21671839.1| RNA-associated protein [Haloarcula vallismortis ATCC 29715]
gi|445759055|gb|EMA10342.1| RNA-associated protein [Haloarcula vallismortis ATCC 29715]
Length = 242
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 91/199 (45%), Gaps = 5/199 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
+ D+++V+ VF + S+G + L++ F+T + I ++ +G +QI+ +R
Sbjct: 37 DGDLEDVIAAEDVFEDASRGDRPPENMLEEVFDTTEPMAIIPEVIKRGGIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + K + ++ +N + P IE+ L++ F V+ + + Q + + L+
Sbjct: 97 QEQKHKQLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYR 360
+ I ++ V V+V A D + ++ +E EEW S G + + G
Sbjct: 157 PVIPIRFDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQN 213
Query: 361 EIDELVRTETRGQGTLELL 379
+ ++V T G+ +++
Sbjct: 214 DFYDVVNEHTSGEAETQII 232
>gi|448639280|ref|ZP_21676694.1| RNA-associated protein [Haloarcula sinaiiensis ATCC 33800]
gi|448658430|ref|ZP_21682830.1| RNA-associated protein [Haloarcula californiae ATCC 33799]
gi|445761155|gb|EMA12404.1| RNA-associated protein [Haloarcula californiae ATCC 33799]
gi|445762867|gb|EMA14079.1| RNA-associated protein [Haloarcula sinaiiensis ATCC 33800]
Length = 242
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 87/193 (45%), Gaps = 5/193 (2%)
Query: 189 VLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFK 248
V+ VF + S+G + L++ F+T + I ++ +GE+QI+ +R E + K
Sbjct: 43 VIAAEDVFEDASRGDRPPENMLEEVFDTTEPMAIIPEVIKRGEIQITADQRREMQEQKHK 102
Query: 249 DIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIE 307
+ ++ +N + P IE+ L++ F V+ + + Q + + L+ + I
Sbjct: 103 QLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALRPVIPIR 162
Query: 308 RAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREIDELV 366
++ V V+V A D + ++ +E EEW S G + + G + ++V
Sbjct: 163 FDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQNDFYDVV 219
Query: 367 RTETRGQGTLELL 379
T G+ +++
Sbjct: 220 NEHTSGEAETQII 232
>gi|448739378|ref|ZP_21721393.1| RNA-associated protein [Halococcus thailandensis JCM 13552]
gi|445799973|gb|EMA50342.1| RNA-associated protein [Halococcus thailandensis JCM 13552]
Length = 241
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 90/194 (46%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF + S+G + D+++ F T + EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFEDASRGDRPAEADVEEVFGTTEPLEIIPEVIREGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+ K + ++ +N + P IE+ L++ F ++ + + Q + + L+
Sbjct: 97 QAQKRKQLINTIARNAVNPQMDGAPHPPDRIESALEETDFRIDPMEPVESQIDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + ++ A D + ++ + EEW G + + P G
Sbjct: 157 PVIPIRFEEVTMAAQIPA---DHAGSAQAQIRQFGDLVREEWQNDGSWIGVVEFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
+ ELV ++ G+G
Sbjct: 214 DFYELVSEQSAGEG 227
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 11 IRMTNVAIVRMKKAGKRFEIACYKNKVISW-RNNIEKDIDEVLQTHTVFTNVSKGQAANK 69
I + R++ G RFE+ + +S RN E D+++V+ VF + S+G +
Sbjct: 2 ISLDEAVTARLESHGARFEVLVDPDAALSIDRNEFEGDLEDVIAAEDVFEDASRGDRPAE 61
Query: 70 EDLKKAFNTEDQTEICKLIL 89
D+++ F T + EI ++
Sbjct: 62 ADVEEVFGTTEPLEIIPEVI 81
>gi|16082606|ref|NP_394745.1| RNA-associated protein [Thermoplasma acidophilum DSM 1728]
Length = 230
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+ L V+ +V KG+ A+ + LK+AF T ++ I+ KG++Q++ ++R +
Sbjct: 37 DIENDLAFPEVYKDVRKGEKASDDSLKEAFKTTVIAQVAIEIVKKGQIQLTTEQRREMYD 96
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I +++ + IN +T P T I + + ++ K ++ Q V+ + +
Sbjct: 97 ERRKQIVNLIAREGINPQTNTPHTPYRISQAMDEAKVKIDPLKPAEDQVQNVLKAIMPII 156
Query: 305 SI--ERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICL 353
I E+A++ V++ A KL +L K EEW G + L
Sbjct: 157 PIRLEKAKIAVKLIGDA----YGKLYGELAKSGYM--KEEWGKDGSWMGIL 201
>gi|407038513|gb|EKE39163.1| rRNA metabolism protein, SBDS family protein [Entamoeba nuttalli
P19]
Length = 246
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 3/185 (1%)
Query: 200 SKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCI 259
+KG A +L KAF + EI K I KGE+Q S ER Q+E++ K I + +
Sbjct: 52 NKGNIAKPAELSKAFPGKSGDEILKTIAEKGEIQFSSDERKQQVEDKKKRIVEYIHNYYV 111
Query: 260 NTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSA 319
+ T +P + I L + ++ +++ EV L + +R ++ V V
Sbjct: 112 DPATNKPHPIVRINNALDAMKLVIDPEAPMEKEIKEVEKKLNDILPSKRLEVEAIVTVP- 170
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
D KL + +K + + +G + I PG + +++ + TRG ++L
Sbjct: 171 --NDFCKLADGAMKKYGRITSSSANGNSKVYKVSIIPGDFDSLNKDLAKATRGNYQIDLP 228
Query: 380 NLKEV 384
N + V
Sbjct: 229 NGQTV 233
>gi|409730114|ref|ZP_11271705.1| RNA-associated protein [Halococcus hamelinensis 100A6]
gi|448722758|ref|ZP_21705289.1| RNA-associated protein [Halococcus hamelinensis 100A6]
gi|445788895|gb|EMA39596.1| RNA-associated protein [Halococcus hamelinensis 100A6]
Length = 241
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E ++++V+ VF + S+G + D++ F T + +I ++ +GE+QI+ +R
Sbjct: 37 EGELEDVIAAEDVFEDASRGDRPAESDVEDVFGTTEPLDIIPEVIREGEIQITADQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
E + + + +++ IN + P IE+ L++ F ++ + Q + + L+
Sbjct: 97 QEQKRRQLINVIARNAINPQMDGAPHPPDRIESALEETDFRIDPMDTVENQVDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + ++ A D + ++ + EEW G + + P G
Sbjct: 157 PVIPIRFEEVTMAAQIPA---DHAGSAQAQIRQFGDLVREEWQNDGSWIGVVEFPAGLQN 213
Query: 361 EIDELVRTETRGQGTL 376
+ ELV ++ G+G +
Sbjct: 214 DFYELVSEQSGGEGEV 229
>gi|55377979|ref|YP_135829.1| RNA-associated protein [Haloarcula marismortui ATCC 43049]
gi|55230704|gb|AAV46123.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 242
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 189 VLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFK 248
V+ VF + S+G + L++ F+T + I ++ +GE+QI+ +R E + K
Sbjct: 43 VIAAEDVFEDASRGDRPPENMLEEVFDTTEPMAIIPEVIKRGEIQITADQRREMQEQKHK 102
Query: 249 DIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIE 307
+ ++ +N + P IE+ L++ F V+ + + Q + + L+ + I
Sbjct: 103 QLIQRITRNAVNPQMDDAPHPPERIESALEETDFRVDPMEPVEAQVDDALDALRPVIPIR 162
Query: 308 RAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEW-SGGGLLLICLIDPGKYREIDELV 366
++ V V+V A D + ++ +E EEW S G + + G + ++V
Sbjct: 163 FDEVTVAVQVPA---DYAGSAQAQIRQFGDLEREEWQSDGSWVGVMTFPAGLQNDFYDVV 219
Query: 367 RTETRGQGTLELL 379
T G+ ++
Sbjct: 220 NEHTSGEAETRII 232
>gi|222444525|ref|ZP_03607040.1| hypothetical protein METSMIALI_00137 [Methanobrevibacter smithii
DSM 2375]
gi|261350936|ref|ZP_05976353.1| ribosome maturation protein SDO1-like protein [Methanobrevibacter
smithii DSM 2374]
gi|222434090|gb|EEE41255.1| rRNA metabolism protein, SBDS family [Methanobrevibacter smithii
DSM 2375]
gi|288860274|gb|EFC92572.1| ribosome maturation protein SDO1-like protein [Methanobrevibacter
smithii DSM 2374]
Length = 233
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 18/191 (9%)
Query: 181 FREKD-----IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQIS 235
FR D I+++L +F + KG A++E + K F T D E+ K+IL KG +Q++
Sbjct: 31 FRNPDGQDVAIEDLLAVEEIFKDSKKGDKASEEAMLKIFETTDPIEVSKVILEKGHVQLT 90
Query: 236 DKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 295
+++ E++ + + +S + IN ++ P IE + + + + QQ
Sbjct: 91 AEQKRQMQEDKRRLVINKISREAINPQSGLPHPAQRIENAVNEAKVKFDPFVSVDQQVQT 150
Query: 296 VIPTLKQCMSIERAQMRVRVEV---SAG--VKDVKKLKEKLVKCATSVENEEWSGGGLLL 350
+ +K + I +++V V + SAG + E L NEEW G +
Sbjct: 151 ALKAIKPLIPIRFEKVKVAVRLPGSSAGGAYSAIHHFGEIL--------NEEWQQDGSWI 202
Query: 351 ICLIDPGKYRE 361
+ PG ++
Sbjct: 203 GIVEMPGGLQD 213
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 13 MTNV---AIVRMKKAGKRFEIACYKNKVISWRNNIEKD--IDEVLQTHTVFTNVSKGQAA 67
M NV I + + G+ FEI + +RN +D I+++L +F + KG A
Sbjct: 1 MVNVDEAIIAKYEYCGEHFEILVDPDLAAEFRNPDGQDVAIEDLLAVEEIFKDSKKGDKA 60
Query: 68 NKEDLKKAFNTEDQTEICKLILMK 91
++E + K F T D E+ K+IL K
Sbjct: 61 SEEAMLKIFETTDPIEVSKVILEK 84
>gi|452207154|ref|YP_007487276.1| SBDS family protein [Natronomonas moolapensis 8.8.11]
gi|452083254|emb|CCQ36540.1| SBDS family protein [Natronomonas moolapensis 8.8.11]
Length = 241
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 80/177 (45%), Gaps = 4/177 (2%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
++++V+ VF + S G + L++ F T D E+ ++ +GE+QI+ ++R E
Sbjct: 39 ELEDVIAAEDVFEDASSGDRPPETSLEEVFGTTDPLEVIPEVIRRGEIQITAEQRREMQE 98
Query: 245 NQFKDIATIVSEKCINTE-TKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQC 303
+ + ++ +N + P IE L++ F ++ + + Q + + L+
Sbjct: 99 RKHNQLVNKIARNAVNPQMDDAPHPPERIERALEEAGFKIDPMEPVENQVDDALDALRPV 158
Query: 304 MSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYR 360
+ I ++ + V+V A + + ++ +E+EEW G + L P R
Sbjct: 159 IPIRFDEVVMAVQVPA---EYAGSAQAQIRQFGDLESEEWQSDGSWVGVLRFPAGLR 212
>gi|76364269|gb|ABA41648.1| Shwachman-Bodian-Diamond protein-like protein, partial [Guillardia
theta]
Length = 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 51/206 (24%)
Query: 102 QIRMT----NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 157
Q+R T + A+ ++KKAG FE+ C+ ++ +R + D+ +V+ + +F
Sbjct: 40 QLRTTAKKDDFALCKLKKAGMHFEVICHPGMILKFREGLVSDVMDVVVSSDIF------- 92
Query: 158 AANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 217
+D K + + ++I S AF E
Sbjct: 93 ----KDAKTRMHRSHVDIVS-----------------------------------AFGKE 113
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTV-SMIEAGL 276
D T K ILM+GE Q + +ER Q+E + +++A + + + T + R +++ M+E
Sbjct: 114 DITSCIKEILMEGEYQHTAEERKRQMEEKMEEVAAFICQNFVETPSHRAYSMEEMMEILE 173
Query: 277 KQIHFSVNVNKNSKQQALEVIPTLKQ 302
+ N ++++ QA+EV+ L++
Sbjct: 174 SHPNLKFNPMRSTEYQAMEVVKQLQE 199
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 10 QIRMT----NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 65
Q+R T + A+ ++KKAG FE+ C+ ++ +R + D+ +V+ + +F +
Sbjct: 40 QLRTTAKKDDFALCKLKKAGMHFEVICHPGMILKFREGLVSDVMDVVVSSDIFKDAKTRM 99
Query: 66 AANKEDLKKAFNTEDQTEICKLILMK 91
+ D+ AF ED T K ILM+
Sbjct: 100 HRSHVDIVSAFGKEDITSCIKEILME 125
>gi|428177052|gb|EKX45934.1| hypothetical protein GUITHDRAFT_163179 [Guillardia theta CCMP2712]
Length = 225
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 92/206 (44%), Gaps = 51/206 (24%)
Query: 102 QIRMT----NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 157
Q+R T + A+ ++KKAG FE+ C+ ++ +R + D+ +V+ + +F
Sbjct: 37 QLRTTAKKDDFALCKLKKAGMHFEVICHPGMILKFREGLVSDVMDVVVSSDIF------- 89
Query: 158 AANKEDLKKAFNTNMLNISSLTSFREKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTE 217
+D K + + ++I S AF E
Sbjct: 90 ----KDAKTRMHRSHVDIVS-----------------------------------AFGKE 110
Query: 218 DQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTV-SMIEAGL 276
D T K ILM+GE Q + +ER Q+E + +++A + + + T + R +++ M+E
Sbjct: 111 DITSCIKEILMEGEYQHTAEERKRQMEEKMEEVAAFICQNFVETPSHRAYSMEEMMEILE 170
Query: 277 KQIHFSVNVNKNSKQQALEVIPTLKQ 302
+ N ++++ QA+EV+ L++
Sbjct: 171 SHPNLKFNPMRSTEYQAMEVVKQLQE 196
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 10 QIRMT----NVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQ 65
Q+R T + A+ ++KKAG FE+ C+ ++ +R + D+ +V+ + +F +
Sbjct: 37 QLRTTAKKDDFALCKLKKAGMHFEVICHPGMILKFREGLVSDVMDVVVSSDIFKDAKTRM 96
Query: 66 AANKEDLKKAFNTEDQTEICKLILMK 91
+ D+ AF ED T K ILM+
Sbjct: 97 HRSHVDIVSAFGKEDITSCIKEILME 122
>gi|10640634|emb|CAC12412.1| conserved hypothetical protein [Thermoplasma acidophilum]
Length = 187
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 185 DIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIE 244
DI+ L V+ +V KG+ A+ + LK+AF T ++ I+ KG++Q++ ++R +
Sbjct: 37 DIENDLAFPEVYKDVRKGEKASDDSLKEAFKTTVIAQVAIEIVKKGQIQLTTEQRREMYD 96
Query: 245 NQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCM 304
+ K I +++ + IN +T P T I + + ++ K ++ Q V+ + +
Sbjct: 97 ERRKQIVNLIAREGINPQTNTPHTPYRISQAMDEAKVKIDPLKPAEDQVQNVLKAIMPII 156
Query: 305 SI--ERAQMRVRV 315
I E+A++ V++
Sbjct: 157 PIRLEKAKIAVKL 169
>gi|76364259|gb|ABA41643.1| Shwachman-Bodian-Diamond protein-like protein, partial
[Bigelowiella natans]
Length = 227
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 172 MLNISSLTSFRE--KDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMK 229
M+N ++ +FR+ + +VL TVF N K A ++L +AF D +I + IL K
Sbjct: 31 MVNPGTVATFRQDRSSLSDVLLVETVFKNARKAVPATSDELFEAFGCTDVRKIAERILSK 90
Query: 230 GELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMI 272
G+ Q S ER +E + ++IA +++ + T P ++ I
Sbjct: 91 GDAQTSSSERKKGMEAKKRNIADFINKNYADARTGLPIPLNRI 133
>gi|448727267|ref|ZP_21709633.1| RNA-associated protein [Halococcus morrhuae DSM 1307]
gi|445791481|gb|EMA42121.1| RNA-associated protein [Halococcus morrhuae DSM 1307]
Length = 241
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 5/194 (2%)
Query: 183 EKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQ 242
E D+++V+ VF + S G + D+++ F T + EI ++ +GE+QI+ ++R
Sbjct: 37 EGDLEDVIAAEDVFEDASHGDRPAEADVEEVFGTTEPLEIIPEVIREGEIQITAEQRREM 96
Query: 243 IENQFKDIATIVSEKCINTETK-RPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLK 301
+ K + ++ +N + P IE+ L++ F ++ + Q + + L+
Sbjct: 97 QAQKRKQLINTIARNAVNPQMDGAPHPPDRIESALEETDFRIDAMDPVESQIDDALDALR 156
Query: 302 QCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDP-GKYR 360
+ I ++ + ++ A + + ++ + V EEW G + + P G
Sbjct: 157 PVIPIRFEEVTMAAQIPA--EHAGSAQAQIRQFGDLV-REEWQNDGSWIGVVEFPAGLQN 213
Query: 361 EIDELVRTETRGQG 374
+ ELV ++ G+G
Sbjct: 214 DFYELVSEQSAGEG 227
>gi|148642304|ref|YP_001272817.1| putative RNA-associated protein [Methanobrevibacter smithii ATCC
35061]
gi|148551321|gb|ABQ86449.1| predicted exosome subunit [Methanobrevibacter smithii ATCC 35061]
Length = 233
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 18/191 (9%)
Query: 181 FREKD-----IDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQIS 235
FR D I+++L +F + KG A++E + K F T D + K+IL KG +Q++
Sbjct: 31 FRNPDGQDVAIEDLLAVEEIFKDSKKGDKASEEAMLKIFETTDPIGVSKVILEKGHVQLT 90
Query: 236 DKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALE 295
+++ E++ + + +S + IN ++ P IE + + + + QQ
Sbjct: 91 AEQKRQMQEDKRRLVINKISREAINPQSGLPHPAQRIENAVNEAKVKFDPFVSVDQQVQT 150
Query: 296 VIPTLKQCMSIERAQMRVRVEV---SAG--VKDVKKLKEKLVKCATSVENEEWSGGGLLL 350
+ +K + I +++V V + SAG + E L NEEW G +
Sbjct: 151 ALKAIKPLIPIRFEKVKVAVRLPGSSAGGAYSAIHHFGEIL--------NEEWQQDGSWI 202
Query: 351 ICLIDPGKYRE 361
+ PG ++
Sbjct: 203 GIVEMPGGLQD 213
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 13 MTNV---AIVRMKKAGKRFEIACYKNKVISWRNNIEKD--IDEVLQTHTVFTNVSKGQAA 67
M NV I + + G+ FEI + +RN +D I+++L +F + KG A
Sbjct: 1 MVNVDEAIIAKYEYCGEHFEILVDPDLAAEFRNPDGQDVAIEDLLAVEEIFKDSKKGDKA 60
Query: 68 NKEDLKKAFNTEDQTEICKLILMK 91
++E + K F T D + K+IL K
Sbjct: 61 SEEAMLKIFETTDPIGVSKVILEK 84
>gi|378755383|gb|EHY65410.1| hypothetical protein NERG_01856 [Nematocida sp. 1 ERTm2]
Length = 232
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N ++ ++ +V K +E+A + K+ +R +DEVL T ++F+++SK
Sbjct: 2 IFTPENIKKLQDIVVVVYKGKHGNYEVAAHPKKLYEYRRQT-ASLDEVLWTESIFSDISK 60
Query: 64 GQAANKEDLKKAFNTEDQT---EICKL 87
G+ A K+ ++ F + EI KL
Sbjct: 61 GKLAGKKSVQDEFGRDHGKALEEILKL 87
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N ++ ++ +V K +E+A + K+ +R +DEVL T ++F+++SK
Sbjct: 2 IFTPENIKKLQDIVVVVYKGKHGNYEVAAHPKKLYEYRRQT-ASLDEVLWTESIFSDISK 60
Query: 156 GQAANKEDLKKAFNTN 171
G+ A K+ ++ F +
Sbjct: 61 GKLAGKKSVQDEFGRD 76
>gi|429964414|gb|ELA46412.1| hypothetical protein VCUG_02090 [Vavraia culicis 'floridensis']
Length = 223
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
+FTP+N ++ NV + ++K +E+ Y N + + NN+ + V+ TH ++ +VSK
Sbjct: 1 MFTPSNIKKLINVTTITLRKNSVTYEVPIYPNTLKPYLNNLLP-LSSVVHTHCIYKSVSK 59
Query: 156 GQAANKEDLKKAFNTNM 172
G N+E LK NM
Sbjct: 60 GLLHNREALKAIPGDNM 76
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP+N ++ NV + ++K +E+ Y N + + NN+ + V+ TH ++ +VSK
Sbjct: 1 MFTPSNIKKLINVTTITLRKNSVTYEVPIYPNTLKPYLNNLLP-LSSVVHTHCIYKSVSK 59
Query: 64 GQAANKEDLK 73
G N+E LK
Sbjct: 60 GLLHNREALK 69
>gi|440491608|gb|ELQ74232.1| putative exosome subunit [Trachipleistophora hominis]
Length = 223
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
+FTP+N ++ NV + +K +E+ Y N + ++NN+ + V+ TH+++ +VSK
Sbjct: 1 MFTPSNIKKLINVTTITFRKNNVAYEVPIYPNTLKPYQNNLIP-LSSVVHTHSIYKSVSK 59
Query: 64 GQAANKEDLKKAFNTEDQTEICKLIL------MKDMSKIFTPTNQIRMTNVAIVR-MKKA 116
G NKE L KA E+ + + IL + M++ + + R ++R ++
Sbjct: 60 GLLHNKEAL-KAIPGENMDQKIEYILRNGHDKQESMTRDYNTERKTRNVGTYLMRKIRYR 118
Query: 117 GKRFEI 122
G+R +
Sbjct: 119 GRRISL 124
>gi|387592201|gb|EIJ87225.1| hypothetical protein NEQG_02560 [Nematocida parisii ERTm3]
gi|387597456|gb|EIJ95076.1| hypothetical protein NEPG_00601 [Nematocida parisii ERTm1]
Length = 232
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 63
IFTP N ++ +V +V K +E+A + K+ +R +D+VL T ++F+++SK
Sbjct: 2 IFTPENIKKLQDVVVVVYKGKHGNYEVAAHPKKLYEYRRQT-ASLDDVLCTESIFSDISK 60
Query: 64 GQAANKEDLKKAFN 77
G+ A+K+ +++ F
Sbjct: 61 GKLASKKSVQEEFG 74
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSK 155
IFTP N ++ +V +V K +E+A + K+ +R +D+VL T ++F+++SK
Sbjct: 2 IFTPENIKKLQDVVVVVYKGKHGNYEVAAHPKKLYEYRRQT-ASLDDVLCTESIFSDISK 60
Query: 156 GQAANKEDLKKAFN 169
G+ A+K+ +++ F
Sbjct: 61 GKLASKKSVQEEFG 74
>gi|386876607|ref|ZP_10118706.1| shwachman-Bodian-Diamond syndrome (SBDS) protein [Candidatus
Nitrosopumilus salaria BD31]
gi|386805569|gb|EIJ65089.1| shwachman-Bodian-Diamond syndrome (SBDS) protein [Candidatus
Nitrosopumilus salaria BD31]
Length = 90
Score = 47.4 bits (111), Expect = 0.014, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 182 REKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSS 241
++KD+ VL + ++T+ KG + E L KAF TED EI ++IL KG+L ++ +R
Sbjct: 14 KKKDLSAVLVSDEIYTDSGKGTRPSAEKLLKAFKTEDPAEIAEIILKKGDLNLTTDQRRK 73
Query: 242 QIENQ 246
+E +
Sbjct: 74 MMEEK 78
>gi|159109180|ref|XP_001704856.1| Hypothetical protein GL50803_40521 [Giardia lamblia ATCC 50803]
gi|157432930|gb|EDO77182.1| hypothetical protein GL50803_40521 [Giardia lamblia ATCC 50803]
Length = 292
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 14 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 73
N +V +K + E+ CY++ VI WR N +D VL T+ ++++ +G+ A +K
Sbjct: 43 ANHQVVSLKLSKNVLEVICYQDAVIKWRENKSTSLDNVLVTNVIYSDAKQGERATDAAIK 102
Query: 74 KAFNTE 79
+A TE
Sbjct: 103 EAGATE 108
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 106 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 165
N +V +K + E+ CY++ VI WR N +D VL T+ ++++ +G+ A +K
Sbjct: 43 ANHQVVSLKLSKNVLEVICYQDAVIKWRENKSTSLDNVLVTNVIYSDAKQGERATDAAIK 102
Query: 166 KAFNT 170
+A T
Sbjct: 103 EAGAT 107
>gi|269859376|ref|XP_002649413.1| exosome subunit, predicted [Enterocytozoon bieneusi H348]
gi|220067176|gb|EED44643.1| exosome subunit, predicted [Enterocytozoon bieneusi H348]
Length = 246
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 4 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWR-----NNIEKDIDEVLQTHTVF 58
+F P N + N++I+ K +EIAC+ NK+ + N + K E+LQ+ ++
Sbjct: 1 MFLPENNFKFINISIITFKHKTYTYEIACFPNKLFEYYKTPTWNFLFKHRIELLQSENIY 60
Query: 59 TNVSKGQ--AANK-EDLKKAFNTEDQTE 83
N+SKG+ +AN +LKK N ++ E
Sbjct: 61 KNISKGELCSANALNELKKIANIDNIEE 88
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 96 IFTPTNQIRMTNVAIVRMKKAGKRFEIACYKNKVISWR-----NNIEKDIDEVLQTHTVF 150
+F P N + N++I+ K +EIAC+ NK+ + N + K E+LQ+ ++
Sbjct: 1 MFLPENNFKFINISIITFKHKTYTYEIACFPNKLFEYYKTPTWNFLFKHRIELLQSENIY 60
Query: 151 TNVSKGQAANKEDLKKAFNTNMLNISSLTSFREKDID 187
N+SKG+ + L + + I+++ + EK+I+
Sbjct: 61 KNISKGELCSANALNE-----LKKIANIDNIEEKNIN 92
>gi|167375905|ref|XP_001733771.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904945|gb|EDR30067.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 202
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 41/84 (48%)
Query: 201 KGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCIN 260
KG A +L KAF + EI K I KGE+Q S ER Q+E++ K I + + ++
Sbjct: 53 KGNIAKPAELSKAFPGKSGDEILKTIAEKGEIQFSSDERKQQVEDKKKRIVEYIHKYYVD 112
Query: 261 TETKRPFTVSMIEAGLKQIHFSVN 284
T +P + I L + ++
Sbjct: 113 PATDKPHPIIRINNALDTMKLVID 136
>gi|76364267|gb|ABA41647.1| Shwachman-Bodian-Diamond protein-like protein, partial
[Mastigamoeba balamuthi]
Length = 230
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 84/181 (46%), Gaps = 3/181 (1%)
Query: 200 SKGQAANKEDLKKAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCI 259
SKG+ A DLK AF ++D K +L KG+ +S ER ++E +++ + + I
Sbjct: 51 SKGEKAKAADLKAAFGSDDLRACLKTVLDKGDAALSADERKDKVEQMRREVVNYIHKYYI 110
Query: 260 NTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSA 319
+ K P V+ IE L+ + ++ ++Q +++ L + M +R + + V
Sbjct: 111 DPRAKTPHPVTRIENALETLKIHLDPELPVERQIQDIVKRLPEVMPCKRCDVEAVLVVP- 169
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETRGQGTLELL 379
V + ++ +V E+++ G + + PG + + + T+G+ ++L+
Sbjct: 170 --NKVMGQAQGIIHKLATVTREQYTSDGCRMDITLVPGDFDTLVADLSKVTKGEFQIDLV 227
Query: 380 N 380
Sbjct: 228 G 228
>gi|440303049|gb|ELP95326.1| hypothetical protein EIN_217910 [Entamoeba invadens IP1]
Length = 230
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 79/172 (45%), Gaps = 4/172 (2%)
Query: 201 KGQAANKEDLKKAFNTEDQTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCI 259
KG + DL KAF TE I + + KGE+Q + +ER Q E + K + V +
Sbjct: 38 KGTLSKPTDLAKAFPGLKGTEAILQFMAEKGEIQFTTEERKQQTEEKKKRLIEYVHMYYV 97
Query: 260 NTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSA 319
+ T +P V I + +H +++ + +++ E+ + + ++R +M + V +
Sbjct: 98 DPTTDKPHPVVRINNAFEAMHLAIDPDAPMEKEIKEIEKKINAVLPMKRVEMEIVVTIP- 156
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETR 371
++ K+ + ++K + V G + I PG + I++ + TR
Sbjct: 157 --ENYCKVADPVLKKSGKVAGMNEGGSDRVYRVTIVPGDFDTINKELAKVTR 206
>gi|253748072|gb|EET02429.1| Hypothetical protein GL50581_266 [Giardia intestinalis ATCC
50581]
Length = 253
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 14 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 73
N +V +K + E+ CY++ VI WR N +D VL T ++++ +G+ A +K
Sbjct: 4 ANHQVVSLKLSKNVLELICYQDAVIKWRENKNMSLDNVLVTSVIYSDAKQGERATDTAIK 63
Query: 74 KAFNTEDQTEICKLILMKDMSKIFT 98
+A TE TE + IL + + T
Sbjct: 64 EAGATE--TEAIQEILTRGHVSLST 86
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 106 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 165
N +V +K + E+ CY++ VI WR N +D VL T ++++ +G+ A +K
Sbjct: 4 ANHQVVSLKLSKNVLELICYQDAVIKWRENKNMSLDNVLVTSVIYSDAKQGERATDTAIK 63
Query: 166 KAFNT 170
+A T
Sbjct: 64 EAGAT 68
>gi|440302527|gb|ELP94834.1| hypothetical protein EIN_247480 [Entamoeba invadens IP1]
Length = 245
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 201 KGQAANKEDLKKAFNTEDQTE-ICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCI 259
KG + DL KAF TE I + + KGE+Q + +ER Q E + K + V +
Sbjct: 53 KGTLSKPTDLAKAFPGLKGTEAILQFMAEKGEIQFTTEERKQQTEEKKKRLIEYVHMYYV 112
Query: 260 NTETKRPFTVSMIEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQMRVRVEVSA 319
+ T +P V I + +H +++ + +++ E+ + + ++R +M + V +
Sbjct: 113 DPTTDKPHPVVRINNAFEAMHLAIDPDAPMEKEIKEIEKKINAVLPVKRVEMEIVVTIP- 171
Query: 320 GVKDVKKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELVRTETR 371
++ K+ + ++K V G + I PG + I++ + TR
Sbjct: 172 --ENYCKVADPVLKKYGKVAGMNEGGSDRVYRVTIVPGDFDTINKELAKVTR 221
>gi|308158196|gb|EFO60983.1| Shwachman-Bodian-Diamond protein-like protein [Giardia lamblia
P15]
Length = 253
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 14 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 73
N IV +K + E+ C+++ VI WR N +D VL T+ ++++ +G+ A +K
Sbjct: 4 ANHQIVSLKLSKNVLEVICHQDAVIKWRENKSMSLDNVLVTNVIYSDAKQGERATDAAIK 63
Query: 74 KAFNTE 79
+A TE
Sbjct: 64 EAGATE 69
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 106 TNVAIVRMKKAGKRFEIACYKNKVISWRNNIEKDIDEVLQTHTVFTNVSKGQAANKEDLK 165
N IV +K + E+ C+++ VI WR N +D VL T+ ++++ +G+ A +K
Sbjct: 4 ANHQIVSLKLSKNVLEVICHQDAVIKWRENKSMSLDNVLVTNVIYSDAKQGERATDAAIK 63
Query: 166 KAFNTNM 172
+A T +
Sbjct: 64 EAGATEI 70
>gi|407038062|gb|EKE38928.1| hypothetical protein ENU1_147710 [Entamoeba nuttalli P19]
Length = 58
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 13 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNI 44
+TN+++VR+ K K+FEIACY N V +WR +
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGV 42
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 105 MTNVAIVRMKKAGKRFEIACYKNKVISWRNNI 136
+TN+++VR+ K K+FEIACY N V +WR +
Sbjct: 11 LTNISVVRLVKGEKKFEIACYPNTVAAWRQGV 42
>gi|397640664|gb|EJK74244.1| hypothetical protein THAOC_04091 [Thalassiosira oceanica]
Length = 187
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 1 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIA 31
MS+ T P NQ+R+TNVA+VR+ + G RFE+A
Sbjct: 156 MSRQITQPLNQVRLTNVAVVRLSRHGHRFEVA 187
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Query: 93 MSKIFT-PTNQIRMTNVAIVRMKKAGKRFEIA 123
MS+ T P NQ+R+TNVA+VR+ + G RFE+A
Sbjct: 156 MSRQITQPLNQVRLTNVAVVRLSRHGHRFEVA 187
>gi|300175276|emb|CBK20587.2| unnamed protein product [Blastocystis hominis]
Length = 180
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 182 REKDIDEVLQTHTVFTNVS---------KGQAANKEDLKKAFNTEDQTEICKLILMKGEL 232
REK E L+ H F +S KGQ + +E F T D+ I K I GE
Sbjct: 24 REK-YPEFLKGHKTFEEISLGNVIFNETKGQLS-EETYTTIFGTADEMTILKTIAKNGEP 81
Query: 233 QISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSMIEAGLKQI-HFSVNVNKNSKQ 291
Q + ++R +E + K I +++ I+ +T P S IE G+ I +++N++ +
Sbjct: 82 QYTVQQRRKLVEEKRKQIIEYITKTYIDPKTNLPHPASRIENGMSTIKGLKIDLNQSVIK 141
Query: 292 QALEVIPTLK 301
Q ++ LK
Sbjct: 142 QGDDIAKQLK 151
>gi|157152695|gb|ABV24047.1| gluthathione S-transferase theta [Takifugu obscurus]
Length = 241
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 17/147 (11%)
Query: 35 NKVISWRN-NIEKDIDEVLQTHTVFTNVSKGQAANKEDLKKAFNTEDQTEICKLI---LM 90
N+ +SW++ N+ +V ++F + G A KE + A ED + KL+ +
Sbjct: 96 NEYLSWQHMNLRSHGSKVFLLRSLFP-IIMGSEAPKEKMDPA--MEDLKQSLKLLEETFL 152
Query: 91 KDMSKIFTPTNQIRMTN-VAIVR-MKKAGKRFEIACYKNKVISWRNNIEKDIDEVL--QT 146
+D K F N+I + + VA+V M+ G ++ + K+ +WR+ ++K+I E L +
Sbjct: 153 QD--KPFIVGNKISLADLVAVVEAMQPVGTGIDVFESRPKLSAWRDRVKKEIGEKLFDEA 210
Query: 147 HTVFTNVS----KGQAANKEDLKKAFN 169
H V N+ K Q E LK F
Sbjct: 211 HEVIMNIGSISQKLQGGQLEMLKPKFQ 237
>gi|76364261|gb|ABA41644.1| Shwachman-Bodian-Diamond protein-like protein [Cyanophora paradoxa]
Length = 205
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)
Query: 154 SKGQAANKEDLKKAFNTNMLNISSLTSFREKDI--DEVLQTHTVFTNVSKGQAANKEDLK 211
S+GQ ED KK T + F+ + +VL VF N +L
Sbjct: 22 SEGQHVTYEDKKKHQYTIVCKPGMAEKFKAGKVGFSQVLVQDAVFKNAKLDATYTDAELS 81
Query: 212 KAFNTEDQTEICKLILMKGELQISDKERSSQIENQFKDIATIVSEKCINTETKRPFTVSM 271
F T ++ IL KGE+++S E + E + ++I + + ++ T P
Sbjct: 82 TTFGTSRLEDVVHQILDKGEIKLSAAEIKEKQEAKRREIIGALHKSYVDARTNAPLPERK 141
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERAQM 311
+E Q+ V ++ + QQ V+ + M I + Q+
Sbjct: 142 LEELFDQLKVKVEHDQEAAQQMQAVVKAINPTMPIAQRQI 181
>gi|448283576|ref|ZP_21474850.1| RNA-associated protein [Natrialba magadii ATCC 43099]
gi|445573895|gb|ELY28409.1| RNA-associated protein [Natrialba magadii ATCC 43099]
Length = 167
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 71/157 (45%), Gaps = 5/157 (3%)
Query: 229 KGELQISDKERSSQIENQFKDIATIVSEKCINTETKR-PFTVSMIEAGLKQIHFSVNVNK 287
+GE+QI+ ++R E + K + ++ +N + P IE L++ F+V+ +
Sbjct: 9 EGEIQITAEQRREMQEQKRKQLINTIARNAVNPQMDNAPHPPERIENALEEAGFTVDPME 68
Query: 288 NSKQQALEVIPTLKQCMSIERAQMRVRVEVSAGVKDVKKLKEKLVKCATSVENEEWSGGG 347
+ Q + + L+ + I ++ + V++ A + + V+ +E EEW G
Sbjct: 69 TVESQVDDALDDLRPVIPIRFEEVTIAVQIPA---EYAGSAQAQVRQFGDLEREEWQPDG 125
Query: 348 LLLICLIDP-GKYREIDELVRTETRGQGTLELLNLKE 383
+ + P G E ++V + G+ EL+ K+
Sbjct: 126 SWIGVVTFPAGMQNEFYDVVNEHSSGKAETELVKDKD 162
>gi|428312059|ref|YP_007123036.1| histidine kinase [Microcoleus sp. PCC 7113]
gi|428253671|gb|AFZ19630.1| histidine kinase,Response regulator receiver domain
protein,histidine kinase [Microcoleus sp. PCC 7113]
Length = 478
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 272 IEAGLKQIHFSVNVNKNSKQQALEVIPTLKQCMSIERA-------QMRVRVEVSAGVKDV 324
I L I SV S Q LE +PTL Q +S+E+A Q ++ +++ K+
Sbjct: 180 INTPLGAIRSSVGNISESLNQTLEQLPTLFQSLSLEQAQDFLALLQRSLQSQLTLSTKEE 239
Query: 325 KKLKEKLVKCATSVENEEWSGGGLLLICLIDPGKYREIDELV 366
++LK L +E+EE +L L+D G Y E+D +
Sbjct: 240 RRLKRAL---KNQLESEEIKNADILADALVDMGIYNEVDAFL 278
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,253,496,564
Number of Sequences: 23463169
Number of extensions: 240174341
Number of successful extensions: 603667
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 741
Number of HSP's that attempted gapping in prelim test: 599389
Number of HSP's gapped (non-prelim): 4359
length of query: 465
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 319
effective length of database: 8,933,572,693
effective search space: 2849809689067
effective search space used: 2849809689067
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)