Query psy13291
Match_columns 89
No_of_seqs 100 out of 1354
Neff 9.2
Searched_HMMs 46136
Date Fri Aug 16 15:42:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13291.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13291hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0581|consensus 99.7 7.4E-17 1.6E-21 107.8 9.6 76 11-87 94-171 (364)
2 KOG0595|consensus 99.7 5.1E-16 1.1E-20 105.1 9.5 77 11-88 25-103 (429)
3 KOG0615|consensus 99.5 2.4E-14 5.3E-19 97.4 7.8 74 11-85 187-267 (475)
4 KOG0582|consensus 99.5 6.9E-14 1.5E-18 96.0 8.9 76 11-87 41-117 (516)
5 KOG0575|consensus 99.5 1.6E-13 3.4E-18 96.5 9.2 77 11-88 33-112 (592)
6 KOG0611|consensus 99.5 6.8E-14 1.5E-18 96.0 4.9 76 11-87 68-146 (668)
7 KOG0610|consensus 99.4 5.2E-13 1.1E-17 91.0 7.3 77 11-88 92-171 (459)
8 KOG0586|consensus 99.4 1.4E-12 3E-17 91.9 9.2 78 10-88 70-149 (596)
9 KOG1006|consensus 99.4 2.3E-13 5.1E-18 89.0 3.5 76 12-87 80-155 (361)
10 KOG0577|consensus 99.4 3.5E-13 7.6E-18 95.7 3.9 75 11-86 41-117 (948)
11 KOG0578|consensus 99.4 4.2E-13 9.1E-18 93.8 4.2 75 12-88 289-364 (550)
12 KOG4717|consensus 99.4 1E-12 2.2E-17 92.3 6.0 77 11-88 33-111 (864)
13 KOG0574|consensus 99.4 2.3E-13 5E-18 90.6 2.7 72 12-87 49-121 (502)
14 KOG0588|consensus 99.4 1.1E-12 2.5E-17 93.5 5.8 77 11-88 27-107 (786)
15 KOG0194|consensus 99.4 6.7E-12 1.4E-16 87.4 9.3 64 24-88 189-255 (474)
16 KOG0201|consensus 99.4 2.5E-13 5.4E-18 92.9 2.0 77 11-88 28-105 (467)
17 cd06650 PKc_MEK1 Catalytic dom 99.4 1.7E-11 3.7E-16 81.6 10.8 76 11-87 20-96 (333)
18 cd06649 PKc_MEK2 Catalytic dom 99.4 2E-11 4.3E-16 81.1 10.8 76 11-87 20-96 (331)
19 KOG0032|consensus 99.3 1.6E-11 3.6E-16 83.8 9.7 76 11-86 50-128 (382)
20 cd06615 PKc_MEK Catalytic doma 99.3 3.1E-11 6.7E-16 79.3 10.5 76 11-87 16-92 (308)
21 KOG0984|consensus 99.3 4.1E-12 8.8E-17 80.8 5.9 76 12-87 62-137 (282)
22 KOG1026|consensus 99.3 3.1E-12 6.7E-17 92.6 6.1 67 21-88 516-583 (774)
23 KOG0196|consensus 99.3 5.4E-12 1.2E-16 91.5 7.3 67 22-89 658-725 (996)
24 cd08227 PK_STRAD_alpha Pseudok 99.3 3.8E-11 8.1E-16 79.5 10.2 76 11-87 15-92 (327)
25 cd05626 STKc_LATS2 Catalytic d 99.3 3.3E-11 7.1E-16 81.5 10.0 76 11-87 16-94 (381)
26 KOG0192|consensus 99.3 2.3E-11 4.9E-16 82.7 9.1 72 15-87 58-133 (362)
27 KOG0600|consensus 99.3 1.4E-11 3E-16 85.7 8.0 76 11-87 132-210 (560)
28 KOG0583|consensus 99.3 2E-11 4.2E-16 83.1 8.6 77 11-87 32-113 (370)
29 cd05629 STKc_NDR_like_fungal C 99.3 3.2E-11 7E-16 81.3 9.4 76 11-87 16-94 (377)
30 cd05599 STKc_NDR_like Catalyti 99.3 3.4E-11 7.5E-16 80.6 9.4 76 11-87 16-94 (364)
31 KOG0587|consensus 99.3 2.1E-11 4.6E-16 89.0 8.8 77 10-88 33-115 (953)
32 cd05598 STKc_LATS Catalytic do 99.3 4.2E-11 9.1E-16 80.6 9.3 76 11-87 16-94 (376)
33 cd05588 STKc_aPKC Catalytic do 99.3 5.8E-11 1.2E-15 78.9 9.8 77 11-87 10-89 (329)
34 PTZ00263 protein kinase A cata 99.3 4.6E-11 1E-15 79.3 9.3 76 11-87 33-111 (329)
35 cd05625 STKc_LATS1 Catalytic d 99.3 6.2E-11 1.4E-15 80.0 9.9 76 11-87 16-94 (382)
36 cd05600 STKc_Sid2p_Dbf2p Catal 99.3 6.2E-11 1.4E-15 78.6 9.7 76 11-87 16-94 (333)
37 cd05084 PTKc_Fes Catalytic dom 99.3 5.9E-11 1.3E-15 75.5 9.1 76 11-87 10-86 (252)
38 cd05105 PTKc_PDGFR_alpha Catal 99.3 4.6E-11 1E-15 81.8 9.1 67 21-87 67-134 (400)
39 KOG0605|consensus 99.3 2.9E-11 6.3E-16 84.4 8.0 76 12-88 157-235 (550)
40 KOG1094|consensus 99.3 1.3E-11 2.8E-16 87.6 6.3 67 21-88 562-629 (807)
41 KOG0616|consensus 99.3 2.5E-11 5.4E-16 80.3 7.1 77 11-88 59-138 (355)
42 cd05628 STKc_NDR1 Catalytic do 99.3 7.5E-11 1.6E-15 79.2 9.6 76 11-87 16-94 (363)
43 cd05571 STKc_PKB Catalytic dom 99.3 9.1E-11 2E-15 77.7 9.8 76 11-87 10-88 (323)
44 cd06617 PKc_MKK3_6 Catalytic d 99.3 9.7E-11 2.1E-15 75.5 9.7 77 11-87 16-92 (283)
45 cd05618 STKc_aPKC_iota Catalyt 99.3 1.2E-10 2.5E-15 77.5 10.2 77 11-87 10-89 (329)
46 KOG0597|consensus 99.3 1E-11 2.2E-16 87.9 5.3 78 9-87 15-93 (808)
47 cd07871 STKc_PCTAIRE3 Catalyti 99.3 7.3E-11 1.6E-15 76.8 9.0 76 11-87 20-95 (288)
48 cd05591 STKc_nPKC_epsilon Cata 99.2 9.3E-11 2E-15 77.5 9.5 77 11-87 10-89 (321)
49 cd05585 STKc_YPK1_like Catalyt 99.2 1E-10 2.3E-15 77.0 9.7 76 11-87 8-86 (312)
50 cd06620 PKc_MAPKK_Byr1_like Ca 99.2 1.6E-10 3.6E-15 74.8 10.3 76 11-87 20-96 (284)
51 cd05590 STKc_nPKC_eta Catalyti 99.2 7.7E-11 1.7E-15 78.0 9.0 77 11-87 10-89 (320)
52 cd05595 STKc_PKB_beta Catalyti 99.2 1.1E-10 2.3E-15 77.5 9.5 76 11-87 10-88 (323)
53 KOG0198|consensus 99.2 5.9E-11 1.3E-15 79.2 8.1 78 9-88 30-110 (313)
54 KOG0591|consensus 99.2 1.2E-12 2.7E-17 86.1 0.1 76 11-87 34-113 (375)
55 cd05107 PTKc_PDGFR_beta Cataly 99.2 8.3E-11 1.8E-15 80.6 9.0 69 20-88 66-135 (401)
56 cd06640 STKc_MST4 Catalytic do 99.2 2.4E-10 5.3E-15 73.8 10.8 76 11-87 19-95 (277)
57 cd06622 PKc_MAPKK_PBS2_like Ca 99.2 5.7E-11 1.2E-15 76.9 7.8 76 11-87 16-92 (286)
58 cd05619 STKc_nPKC_theta Cataly 99.2 1.3E-10 2.7E-15 77.0 9.4 77 11-87 10-89 (316)
59 KOG1989|consensus 99.2 7.1E-11 1.5E-15 85.6 8.6 74 12-86 53-134 (738)
60 KOG0659|consensus 99.2 2.5E-11 5.5E-16 79.2 5.7 77 11-88 17-94 (318)
61 cd05104 PTKc_Kit Catalytic dom 99.2 6.7E-11 1.5E-15 80.0 8.0 69 19-87 63-132 (375)
62 cd06641 STKc_MST3 Catalytic do 99.2 3E-10 6.4E-15 73.4 10.6 76 11-87 19-95 (277)
63 cd05592 STKc_nPKC_theta_delta 99.2 1.5E-10 3.3E-15 76.5 9.4 77 11-87 10-89 (316)
64 cd05596 STKc_ROCK Catalytic do 99.2 1.6E-10 3.4E-15 78.1 9.6 76 11-87 58-136 (370)
65 cd05570 STKc_PKC Catalytic dom 99.2 1.5E-10 3.2E-15 76.5 9.3 77 11-87 10-89 (318)
66 KOG0607|consensus 99.2 3.4E-12 7.4E-17 85.4 1.5 71 15-86 97-168 (463)
67 cd05621 STKc_ROCK2 Catalytic d 99.2 2.2E-10 4.7E-15 77.5 10.1 76 11-87 58-136 (370)
68 cd05593 STKc_PKB_gamma Catalyt 99.2 1.9E-10 4.2E-15 76.4 9.7 76 11-87 10-88 (328)
69 KOG0589|consensus 99.2 4.8E-11 1E-15 82.2 6.9 75 12-87 20-97 (426)
70 cd05106 PTKc_CSF-1R Catalytic 99.2 1.2E-10 2.6E-15 78.9 8.6 76 12-87 54-135 (374)
71 cd05627 STKc_NDR2 Catalytic do 99.2 2.1E-10 4.5E-15 77.0 9.8 76 11-87 16-94 (360)
72 cd05617 STKc_aPKC_zeta Catalyt 99.2 2.9E-10 6.3E-15 75.5 10.1 77 11-87 10-89 (327)
73 cd07869 STKc_PFTAIRE1 Catalyti 99.2 1.8E-10 3.8E-15 75.4 8.9 75 11-86 20-94 (303)
74 cd05612 STKc_PRKX_like Catalyt 99.2 6.5E-11 1.4E-15 77.2 6.8 76 11-87 16-94 (291)
75 cd05102 PTKc_VEGFR3 Catalytic 99.2 8E-11 1.7E-15 78.1 7.3 69 19-87 35-105 (338)
76 cd05594 STKc_PKB_alpha Catalyt 99.2 2.7E-10 5.7E-15 75.5 9.8 76 11-87 10-88 (325)
77 PLN00034 mitogen-activated pro 99.2 1.5E-10 3.3E-15 77.5 8.7 72 11-83 89-161 (353)
78 cd05575 STKc_SGK Catalytic dom 99.2 2.5E-10 5.4E-15 75.6 9.6 77 11-87 10-89 (323)
79 cd05064 PTKc_EphR_A10 Catalyti 99.2 2.1E-10 4.6E-15 73.8 9.0 68 19-87 31-99 (266)
80 KOG1095|consensus 99.2 1.1E-10 2.3E-15 87.0 8.3 65 23-88 724-789 (1025)
81 cd06619 PKc_MKK5 Catalytic dom 99.2 4.6E-10 9.9E-15 72.6 10.4 74 10-84 15-89 (279)
82 KOG0197|consensus 99.2 1.2E-10 2.6E-15 80.9 8.0 67 18-87 226-294 (468)
83 cd05096 PTKc_DDR1 Catalytic do 99.2 2.3E-10 5.1E-15 74.8 9.0 67 20-87 45-112 (304)
84 cd06611 STKc_SLK_like Catalyti 99.2 5.6E-10 1.2E-14 72.0 10.7 75 11-87 20-95 (280)
85 cd06605 PKc_MAPKK Catalytic do 99.2 2.6E-10 5.7E-15 72.8 9.0 76 11-87 16-92 (265)
86 cd06917 STKc_NAK1_like Catalyt 99.2 4.3E-10 9.3E-15 72.4 10.0 77 11-87 16-95 (277)
87 cd08216 PK_STRAD Pseudokinase 99.2 2.1E-10 4.5E-15 75.2 8.7 76 11-87 15-92 (314)
88 PHA02988 hypothetical protein; 99.2 3.3E-10 7.2E-15 73.9 9.6 70 17-87 39-115 (283)
89 cd05620 STKc_nPKC_delta Cataly 99.2 2.4E-10 5.2E-15 75.6 8.9 77 11-87 10-89 (316)
90 cd06642 STKc_STK25-YSK1 Cataly 99.2 1.3E-10 2.8E-15 75.0 7.5 76 11-87 19-95 (277)
91 cd08226 PK_STRAD_beta Pseudoki 99.2 3.9E-10 8.5E-15 74.7 10.0 76 11-87 15-92 (328)
92 cd05608 STKc_GRK1 Catalytic do 99.2 3.2E-10 6.9E-15 73.6 9.3 75 11-86 8-85 (280)
93 cd07873 STKc_PCTAIRE1 Catalyti 99.2 3.4E-10 7.3E-15 74.0 9.3 76 11-87 21-96 (301)
94 cd05597 STKc_DMPK_like Catalyt 99.2 3.3E-10 7.2E-15 75.3 9.4 76 11-87 16-94 (331)
95 cd05622 STKc_ROCK1 Catalytic d 99.2 4.1E-10 9E-15 76.1 9.9 76 11-87 58-136 (371)
96 cd05604 STKc_SGK3 Catalytic do 99.2 4.5E-10 9.9E-15 74.4 9.9 77 11-87 10-89 (325)
97 KOG1187|consensus 99.2 2.2E-10 4.7E-15 77.8 8.5 66 20-87 98-165 (361)
98 cd05601 STKc_CRIK Catalytic do 99.2 3.8E-10 8.1E-15 74.7 9.3 77 11-88 16-95 (330)
99 KOG0598|consensus 99.2 1.1E-10 2.4E-15 78.4 6.7 76 11-87 40-118 (357)
100 cd06621 PKc_MAPKK_Pek1_like Ca 99.2 6.3E-10 1.4E-14 72.2 10.1 75 11-86 16-93 (287)
101 cd08219 STKc_Nek3 Catalytic do 99.2 9.4E-10 2E-14 70.0 10.7 76 11-87 15-91 (255)
102 cd05066 PTKc_EphR_A Catalytic 99.2 5.3E-10 1.2E-14 71.8 9.6 76 11-87 19-98 (267)
103 PTZ00267 NIMA-related protein 99.2 6.5E-10 1.4E-14 77.5 10.6 74 11-86 82-157 (478)
104 cd07836 STKc_Pho85 Catalytic d 99.2 3.7E-10 8E-15 72.8 8.8 75 11-86 15-89 (284)
105 cd05603 STKc_SGK2 Catalytic do 99.2 4.3E-10 9.4E-15 74.3 9.3 77 11-87 10-89 (321)
106 PTZ00426 cAMP-dependent protei 99.2 4.5E-10 9.8E-15 75.2 9.4 76 11-87 45-124 (340)
107 cd08221 STKc_Nek9 Catalytic do 99.2 1.1E-09 2.3E-14 69.7 10.5 75 12-87 16-92 (256)
108 cd05605 STKc_GRK4_like Catalyt 99.1 4.9E-10 1.1E-14 72.9 9.0 75 11-86 15-92 (285)
109 cd05607 STKc_GRK7 Catalytic do 99.1 6.4E-10 1.4E-14 72.0 9.5 75 11-86 8-85 (277)
110 cd05582 STKc_RSK_N N-terminal 99.1 5.7E-10 1.2E-14 73.6 9.2 75 12-87 12-91 (318)
111 cd08529 STKc_FA2-like Catalyti 99.1 7.7E-10 1.7E-14 70.2 9.5 76 11-87 15-92 (256)
112 cd05103 PTKc_VEGFR2 Catalytic 99.1 3E-10 6.6E-15 75.8 7.9 76 12-87 23-105 (343)
113 KOG0580|consensus 99.1 2.5E-11 5.5E-16 78.2 2.5 75 11-86 37-114 (281)
114 cd05615 STKc_cPKC_alpha Cataly 99.1 5.9E-10 1.3E-14 73.9 9.2 77 11-87 15-94 (323)
115 cd06646 STKc_MAP4K5 Catalytic 99.1 1.3E-09 2.8E-14 69.8 10.4 75 11-87 24-99 (267)
116 PF07714 Pkinase_Tyr: Protein 99.1 4.1E-10 8.9E-15 72.4 8.1 68 20-88 27-95 (259)
117 cd06645 STKc_MAP4K3 Catalytic 99.1 1.5E-09 3.4E-14 69.5 10.7 75 11-87 24-99 (267)
118 cd05609 STKc_MAST Catalytic do 99.1 1E-09 2.2E-14 71.9 10.0 76 11-87 16-94 (305)
119 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.1 5.8E-10 1.3E-14 71.7 8.7 76 11-87 10-88 (269)
120 cd06609 STKc_MST3_like Catalyt 99.1 1.3E-09 2.7E-14 70.2 10.2 76 11-87 16-92 (274)
121 KOG0593|consensus 99.1 4.1E-11 9E-16 79.7 3.3 73 11-84 17-91 (396)
122 cd07844 STKc_PCTAIRE_like Cata 99.1 6.4E-10 1.4E-14 72.1 8.9 76 11-87 20-95 (291)
123 cd07872 STKc_PCTAIRE2 Catalyti 99.1 7.2E-10 1.6E-14 72.7 9.2 75 11-86 21-95 (309)
124 cd06613 STKc_MAP4K3_like Catal 99.1 1.2E-09 2.7E-14 69.5 10.0 75 11-87 18-93 (262)
125 cd05624 STKc_MRCK_beta Catalyt 99.1 1E-09 2.2E-14 72.9 9.7 76 11-87 16-94 (331)
126 cd08228 STKc_Nek6 Catalytic do 99.1 1.5E-09 3.3E-14 69.4 10.2 75 11-86 17-94 (267)
127 KOG0694|consensus 99.1 2.3E-10 5.1E-15 81.8 6.9 72 11-82 383-457 (694)
128 cd05573 STKc_ROCK_NDR_like Cat 99.1 3.9E-10 8.4E-15 75.0 7.7 76 11-87 16-94 (350)
129 cd05580 STKc_PKA Catalytic dom 99.1 1.1E-09 2.3E-14 71.3 9.5 76 11-87 16-94 (290)
130 cd06623 PKc_MAPKK_plant_like C 99.1 1.7E-09 3.6E-14 68.9 10.1 76 11-87 16-92 (264)
131 KOG0585|consensus 99.1 2.8E-10 6E-15 79.2 6.8 69 10-79 111-194 (576)
132 cd05587 STKc_cPKC Catalytic do 99.1 1.3E-09 2.9E-14 72.1 9.9 77 11-87 15-94 (324)
133 cd05042 PTKc_Aatyk Catalytic d 99.1 8.9E-10 1.9E-14 70.7 8.8 75 12-87 11-88 (269)
134 cd08224 STKc_Nek6_Nek7 Catalyt 99.1 1.6E-09 3.5E-14 69.1 10.0 76 11-87 17-95 (267)
135 KOG0661|consensus 99.1 3.6E-11 7.8E-16 83.3 2.4 77 12-88 26-103 (538)
136 cd07848 STKc_CDKL5 Catalytic d 99.1 5.1E-10 1.1E-14 72.4 7.7 75 11-86 16-92 (287)
137 cd05065 PTKc_EphR_B Catalytic 99.1 1E-09 2.2E-14 70.5 9.0 76 11-87 19-98 (269)
138 cd05602 STKc_SGK1 Catalytic do 99.1 1.1E-09 2.5E-14 72.4 9.5 77 11-87 10-89 (325)
139 KOG0663|consensus 99.1 3E-10 6.5E-15 76.3 6.6 75 12-87 92-169 (419)
140 cd05589 STKc_PKN Catalytic dom 99.1 7.7E-10 1.7E-14 73.2 8.5 77 11-87 14-95 (324)
141 cd05572 STKc_cGK_PKG Catalytic 99.1 1.5E-09 3.2E-14 69.4 9.6 76 11-87 8-86 (262)
142 cd05577 STKc_GRK Catalytic dom 99.1 1.5E-09 3.3E-14 70.1 9.5 76 11-87 8-86 (277)
143 cd05611 STKc_Rim15_like Cataly 99.1 1.6E-09 3.4E-14 69.2 9.5 77 11-87 11-90 (260)
144 cd06644 STKc_STK10_LOK Catalyt 99.1 2.4E-09 5.2E-14 69.6 10.5 75 11-87 27-102 (292)
145 cd05631 STKc_GRK4 Catalytic do 99.1 1.5E-09 3.3E-14 70.6 9.5 75 11-86 15-92 (285)
146 cd05088 PTKc_Tie2 Catalytic do 99.1 1.3E-09 2.8E-14 71.5 9.0 77 11-87 22-101 (303)
147 cd06614 STKc_PAK Catalytic dom 99.1 2.7E-09 5.9E-14 69.1 10.5 75 11-88 34-109 (286)
148 cd05085 PTKc_Fer Catalytic dom 99.1 1.8E-09 4E-14 68.4 9.4 75 11-87 10-85 (250)
149 cd06624 STKc_ASK Catalytic dom 99.1 2.5E-09 5.4E-14 68.6 10.0 75 11-87 23-98 (268)
150 cd05033 PTKc_EphR Catalytic do 99.1 1.9E-09 4.1E-14 69.1 9.4 76 11-87 19-98 (266)
151 cd05090 PTKc_Ror1 Catalytic do 99.1 1.7E-09 3.7E-14 70.0 9.2 75 11-86 20-99 (283)
152 cd05063 PTKc_EphR_A2 Catalytic 99.1 2.1E-09 4.5E-14 68.9 9.5 76 11-87 20-99 (268)
153 cd06656 STKc_PAK3 Catalytic do 99.1 3E-09 6.4E-14 69.6 10.4 75 11-87 34-109 (297)
154 cd05616 STKc_cPKC_beta Catalyt 99.1 2.4E-09 5.2E-14 70.8 10.0 77 11-87 15-94 (323)
155 cd05055 PTKc_PDGFR Catalytic d 99.1 1.8E-09 3.9E-14 70.9 9.4 69 19-87 63-132 (302)
156 cd08220 STKc_Nek8 Catalytic do 99.1 2.2E-09 4.7E-14 68.1 9.4 76 11-87 15-92 (256)
157 cd06630 STKc_MEKK1 Catalytic d 99.1 1.6E-09 3.4E-14 69.3 8.9 76 11-87 15-96 (268)
158 cd06610 STKc_OSR1_SPAK Catalyt 99.1 3.6E-09 7.8E-14 67.4 10.5 76 11-87 16-92 (267)
159 cd05049 PTKc_Trk Catalytic dom 99.1 1.6E-09 3.6E-14 69.7 8.9 76 11-87 20-101 (280)
160 cd06654 STKc_PAK1 Catalytic do 99.1 3.8E-09 8.3E-14 69.1 10.8 75 11-87 35-110 (296)
161 PRK13184 pknD serine/threonine 99.1 2.3E-09 4.9E-14 79.8 10.5 76 11-87 17-95 (932)
162 cd05630 STKc_GRK6 Catalytic do 99.1 3E-09 6.6E-14 69.2 10.1 75 11-86 15-92 (285)
163 cd07859 STKc_TDY_MAPK_plant Ca 99.1 2E-09 4.3E-14 71.1 9.3 76 11-87 15-96 (338)
164 cd06632 STKc_MEKK1_plant Catal 99.1 3.4E-09 7.4E-14 67.2 10.0 76 11-87 15-95 (258)
165 cd05047 PTKc_Tie Catalytic dom 99.1 2.4E-09 5.2E-14 68.9 9.4 77 11-87 10-89 (270)
166 cd06625 STKc_MEKK3_like Cataly 99.1 3.4E-09 7.3E-14 67.6 9.9 76 11-87 17-97 (263)
167 cd08229 STKc_Nek7 Catalytic do 99.1 1.9E-09 4.2E-14 68.9 8.8 76 11-87 17-95 (267)
168 cd05584 STKc_p70S6K Catalytic 99.1 2.1E-09 4.5E-14 71.2 9.2 75 12-87 12-93 (323)
169 cd06616 PKc_MKK4 Catalytic dom 99.1 2.8E-09 6E-14 69.0 9.6 74 11-84 19-92 (288)
170 cd07831 STKc_MOK Catalytic dom 99.1 1.8E-09 3.9E-14 69.4 8.6 76 11-86 14-91 (282)
171 cd07861 STKc_CDK1_euk Catalyti 99.1 2.4E-09 5.3E-14 69.0 9.2 75 11-86 15-90 (285)
172 cd05574 STKc_phototropin_like 99.1 2.8E-09 6E-14 70.0 9.6 76 11-87 16-94 (316)
173 cd05050 PTKc_Musk Catalytic do 99.1 2E-09 4.3E-14 69.8 8.8 67 20-87 34-101 (288)
174 cd06608 STKc_myosinIII_like Ca 99.1 3.2E-09 6.8E-14 67.8 9.6 76 10-87 20-102 (275)
175 cd05586 STKc_Sck1_like Catalyt 99.0 2.5E-09 5.3E-14 70.9 9.2 77 11-87 8-89 (330)
176 cd05036 PTKc_ALK_LTK Catalytic 99.0 2.7E-09 5.8E-14 68.9 9.2 75 12-87 22-102 (277)
177 cd05062 PTKc_IGF-1R Catalytic 99.0 2.6E-09 5.6E-14 68.9 9.1 67 20-87 35-102 (277)
178 KOG0579|consensus 99.0 2.5E-11 5.4E-16 87.2 -0.4 74 11-86 47-121 (1187)
179 cd06607 STKc_TAO Catalytic dom 99.0 5.3E-09 1.1E-13 68.6 10.5 75 11-86 30-106 (307)
180 cd05099 PTKc_FGFR4 Catalytic d 99.0 3.1E-09 6.8E-14 69.9 9.4 68 20-87 43-111 (314)
181 cd05041 PTKc_Fes_like Catalyti 99.0 4.2E-09 9.1E-14 66.8 9.7 75 11-87 10-85 (251)
182 cd05048 PTKc_Ror Catalytic Dom 99.0 3.3E-09 7.1E-14 68.5 9.3 76 11-87 20-101 (283)
183 KOG0983|consensus 99.0 4.4E-10 9.6E-15 74.2 5.2 78 10-87 106-183 (391)
184 cd08218 STKc_Nek1 Catalytic do 99.0 4.6E-09 9.9E-14 66.8 9.8 76 11-87 15-92 (256)
185 cd05097 PTKc_DDR_like Catalyti 99.0 1.9E-09 4E-14 70.3 8.1 65 22-87 45-110 (295)
186 cd05053 PTKc_FGFR Catalytic do 99.0 4E-09 8.7E-14 68.4 9.6 77 11-87 27-109 (293)
187 cd06629 STKc_MAPKKK_Bck1_like 99.0 2.1E-09 4.5E-14 69.0 8.1 76 11-87 16-101 (272)
188 cd05579 STKc_MAST_like Catalyt 99.0 1.3E-09 2.9E-14 69.1 7.1 76 11-87 8-86 (265)
189 cd05079 PTKc_Jak1_rpt2 Catalyt 99.0 3.2E-09 6.9E-14 68.8 9.0 69 18-87 30-101 (284)
190 cd05623 STKc_MRCK_alpha Cataly 99.0 3.8E-09 8.3E-14 70.2 9.4 76 11-87 16-94 (332)
191 smart00219 TyrKc Tyrosine kina 99.0 3.9E-09 8.4E-14 66.9 9.1 76 11-87 14-94 (258)
192 KOG4278|consensus 99.0 2.2E-10 4.8E-15 82.4 3.7 75 12-89 283-358 (1157)
193 cd06638 STKc_myosinIIIA Cataly 99.0 3.1E-09 6.7E-14 68.7 8.8 74 11-86 33-112 (286)
194 cd06637 STKc_TNIK Catalytic do 99.0 6.6E-09 1.4E-13 66.6 10.2 75 11-87 21-102 (272)
195 cd06628 STKc_MAPKKK_Byr2_like 99.0 4.9E-09 1.1E-13 67.1 9.5 76 11-87 15-99 (267)
196 cd06655 STKc_PAK2 Catalytic do 99.0 5.4E-09 1.2E-13 68.4 9.8 75 11-87 34-109 (296)
197 KOG0660|consensus 99.0 1.2E-09 2.7E-14 73.4 6.7 76 12-88 38-119 (359)
198 PTZ00266 NIMA-related protein 99.0 3.9E-09 8.5E-14 79.1 10.0 76 11-87 28-107 (1021)
199 cd05610 STKc_MASTL Catalytic d 99.0 6.3E-09 1.4E-13 75.4 10.8 76 11-87 19-97 (669)
200 cd06643 STKc_SLK Catalytic dom 99.0 8.6E-09 1.9E-13 66.6 10.5 75 11-87 20-95 (282)
201 cd06612 STKc_MST1_2 Catalytic 99.0 4.3E-09 9.2E-14 66.8 8.8 73 11-87 18-91 (256)
202 cd06652 STKc_MEKK2 Catalytic d 99.0 8.4E-09 1.8E-13 66.1 10.3 76 11-87 17-99 (265)
203 cd07870 STKc_PFTAIRE2 Catalyti 99.0 4.6E-09 1E-13 68.2 9.1 74 11-85 20-93 (291)
204 cd05052 PTKc_Abl Catalytic dom 99.0 3.2E-09 6.9E-14 68.0 8.2 74 11-87 21-95 (263)
205 cd05098 PTKc_FGFR1 Catalytic d 99.0 5.4E-09 1.2E-13 68.5 9.4 67 21-87 50-117 (307)
206 cd06657 STKc_PAK4 Catalytic do 99.0 5.6E-09 1.2E-13 68.3 9.4 75 11-87 35-110 (292)
207 cd07847 STKc_CDKL1_4 Catalytic 99.0 5.9E-09 1.3E-13 67.2 9.4 76 11-87 16-93 (286)
208 cd05095 PTKc_DDR2 Catalytic do 99.0 3.5E-09 7.6E-14 69.0 8.4 67 20-87 45-112 (296)
209 cd05632 STKc_GRK5 Catalytic do 99.0 6.6E-09 1.4E-13 67.6 9.6 75 11-86 15-92 (285)
210 cd05032 PTKc_InsR_like Catalyt 99.0 4.9E-09 1.1E-13 67.4 8.8 67 20-87 35-102 (277)
211 cd05061 PTKc_InsR Catalytic do 99.0 5.3E-09 1.2E-13 67.9 9.0 66 21-87 36-102 (288)
212 KOG4250|consensus 99.0 1.8E-10 3.8E-15 82.7 2.2 75 12-87 29-110 (732)
213 cd08217 STKc_Nek2 Catalytic do 99.0 9.1E-09 2E-13 65.3 9.9 76 11-87 15-94 (265)
214 cd05045 PTKc_RET Catalytic dom 99.0 6.4E-09 1.4E-13 67.5 9.3 65 22-87 31-96 (290)
215 cd08225 STKc_Nek5 Catalytic do 99.0 3E-09 6.5E-14 67.5 7.6 76 11-87 15-92 (257)
216 cd06635 STKc_TAO1 Catalytic do 99.0 1.3E-08 2.8E-13 67.2 10.8 74 11-85 40-115 (317)
217 KOG0592|consensus 99.0 6.7E-10 1.5E-14 78.1 4.9 78 11-88 88-168 (604)
218 cd05614 STKc_MSK2_N N-terminal 99.0 7.5E-09 1.6E-13 68.6 9.7 76 12-87 16-98 (332)
219 cd08528 STKc_Nek10 Catalytic d 99.0 1E-08 2.2E-13 65.8 10.0 76 11-86 15-101 (269)
220 cd06659 STKc_PAK6 Catalytic do 99.0 3.5E-09 7.6E-14 69.4 8.0 75 11-87 36-111 (297)
221 cd06636 STKc_MAP4K4_6 Catalyti 99.0 6.1E-09 1.3E-13 67.3 9.0 75 11-87 31-112 (282)
222 cd05578 STKc_Yank1 Catalytic d 99.0 1.7E-09 3.8E-14 68.9 6.4 76 11-87 15-93 (258)
223 cd07832 STKc_CCRK Catalytic do 99.0 9.6E-09 2.1E-13 66.2 9.8 75 11-87 15-91 (286)
224 cd06647 STKc_PAK_I Catalytic d 99.0 5.5E-09 1.2E-13 68.3 8.7 75 11-87 34-109 (293)
225 cd06631 STKc_YSK4 Catalytic do 99.0 1E-08 2.2E-13 65.6 9.7 74 12-87 16-95 (265)
226 cd06626 STKc_MEKK4 Catalytic d 99.0 1E-08 2.2E-13 65.3 9.5 76 11-87 15-92 (264)
227 cd05115 PTKc_Zap-70 Catalytic 99.0 9.7E-09 2.1E-13 65.8 9.5 74 12-87 11-87 (257)
228 PLN00009 cyclin-dependent kina 99.0 7.2E-09 1.6E-13 67.4 8.9 75 11-86 17-92 (294)
229 cd06648 STKc_PAK_II Catalytic 99.0 1.2E-08 2.7E-13 66.3 10.0 75 11-87 34-109 (285)
230 KOG4236|consensus 99.0 3.6E-09 7.8E-14 75.1 7.7 74 12-86 580-655 (888)
231 cd08215 STKc_Nek Catalytic dom 99.0 1.2E-08 2.6E-13 64.4 9.6 76 11-87 15-92 (258)
232 cd05101 PTKc_FGFR2 Catalytic d 99.0 5.8E-09 1.2E-13 68.2 8.3 68 20-87 46-114 (304)
233 cd06658 STKc_PAK5 Catalytic do 99.0 3.9E-09 8.4E-14 69.0 7.5 75 11-87 37-112 (292)
234 cd05100 PTKc_FGFR3 Catalytic d 99.0 8.4E-09 1.8E-13 68.5 9.2 66 22-87 45-111 (334)
235 cd00192 PTKc Catalytic domain 99.0 7.7E-09 1.7E-13 65.5 8.6 76 12-88 11-90 (262)
236 cd06633 STKc_TAO3 Catalytic do 99.0 1.9E-08 4E-13 66.4 10.7 75 11-86 36-112 (313)
237 cd06618 PKc_MKK7 Catalytic dom 99.0 6.7E-09 1.4E-13 67.7 8.4 77 11-87 30-106 (296)
238 cd07837 STKc_CdkB_plant Cataly 99.0 5.2E-09 1.1E-13 67.9 7.8 76 11-86 16-97 (295)
239 PLN00113 leucine-rich repeat r 99.0 3.8E-09 8.2E-14 78.5 8.0 71 11-87 705-776 (968)
240 cd07843 STKc_CDC2L1 Catalytic 99.0 1.3E-08 2.9E-13 66.1 9.7 76 11-87 20-98 (293)
241 cd05051 PTKc_DDR Catalytic dom 99.0 8.5E-09 1.8E-13 66.9 8.7 67 20-87 45-112 (296)
242 cd05039 PTKc_Csk_like Catalyti 99.0 9.4E-09 2E-13 65.5 8.7 71 12-87 22-93 (256)
243 cd05038 PTKc_Jak_rpt2 Catalyti 98.9 1.2E-08 2.7E-13 65.5 9.3 68 19-87 31-101 (284)
244 cd07846 STKc_CDKL2_3 Catalytic 98.9 2E-09 4.3E-14 69.5 5.6 76 10-86 15-92 (286)
245 cd05046 PTK_CCK4 Pseudokinase 98.9 8.3E-09 1.8E-13 66.3 8.3 67 20-87 34-101 (275)
246 cd05089 PTKc_Tie1 Catalytic do 98.9 8.7E-09 1.9E-13 67.3 8.4 77 11-87 17-96 (297)
247 cd07860 STKc_CDK2_3 Catalytic 98.9 4.1E-09 8.8E-14 68.1 6.7 75 11-86 15-90 (284)
248 cd07833 STKc_CDKL Catalytic do 98.9 5.8E-09 1.3E-13 67.3 7.4 76 11-87 16-93 (288)
249 cd05080 PTKc_Tyk2_rpt2 Catalyt 98.9 1.7E-08 3.7E-13 65.3 9.6 69 18-87 30-101 (283)
250 cd05148 PTKc_Srm_Brk Catalytic 98.9 7.1E-09 1.5E-13 66.1 7.7 74 11-87 21-95 (261)
251 cd06627 STKc_Cdc7_like Catalyt 98.9 3E-08 6.4E-13 62.7 10.4 76 11-87 15-92 (254)
252 cd05076 PTK_Tyk2_rpt1 Pseudoki 98.9 8.2E-09 1.8E-13 66.8 7.9 64 22-87 45-109 (274)
253 cd05122 PKc_STE Catalytic doma 98.9 2.7E-08 5.9E-13 62.4 10.1 75 11-87 15-90 (253)
254 cd05054 PTKc_VEGFR Catalytic d 98.9 7.7E-09 1.7E-13 69.1 7.9 69 19-87 35-105 (337)
255 cd05059 PTKc_Tec_like Catalyti 98.9 1.5E-08 3.2E-13 64.7 8.9 73 11-87 19-92 (256)
256 cd07839 STKc_CDK5 Catalytic do 98.9 2.8E-09 6E-14 68.8 5.6 75 11-86 15-90 (284)
257 cd06639 STKc_myosinIIIB Cataly 98.9 2.4E-08 5.2E-13 64.8 10.0 74 11-86 37-116 (291)
258 KOG0576|consensus 98.9 4.3E-11 9.2E-16 85.8 -3.2 72 12-85 31-103 (829)
259 cd05114 PTKc_Tec_Rlk Catalytic 98.9 1.6E-08 3.4E-13 64.5 8.9 72 12-87 20-92 (256)
260 cd05044 PTKc_c-ros Catalytic d 98.9 3.9E-09 8.4E-14 67.6 6.1 65 22-87 27-92 (269)
261 cd06651 STKc_MEKK3 Catalytic d 98.9 3.8E-08 8.2E-13 63.2 10.6 76 11-87 17-99 (266)
262 cd07841 STKc_CDK7 Catalytic do 98.9 1.4E-08 2.9E-13 66.1 8.5 76 11-87 15-94 (298)
263 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 98.9 2.5E-08 5.4E-13 64.5 9.7 68 18-87 30-100 (284)
264 cd07853 STKc_NLK Catalytic dom 98.9 1E-08 2.2E-13 69.1 8.1 75 11-86 15-95 (372)
265 cd06606 STKc_MAPKKK Catalytic 98.9 4.4E-08 9.5E-13 61.7 10.5 77 11-88 15-95 (260)
266 cd05057 PTKc_EGFR_like Catalyt 98.9 2.9E-08 6.3E-13 64.1 9.8 75 11-87 22-101 (279)
267 cd07876 STKc_JNK2 Catalytic do 98.9 2.1E-08 4.6E-13 67.2 9.5 74 11-85 36-116 (359)
268 cd08530 STKc_CNK2-like Catalyt 98.9 9.4E-09 2E-13 65.1 7.4 76 11-87 15-92 (256)
269 PF00069 Pkinase: Protein kina 98.9 2.2E-08 4.8E-13 63.6 9.0 75 11-86 14-90 (260)
270 cd06653 STKc_MEKK3_like_1 Cata 98.9 4.3E-08 9.4E-13 62.8 10.4 75 12-87 18-99 (264)
271 KOG0667|consensus 98.9 1.4E-08 3E-13 72.3 8.6 76 12-89 202-282 (586)
272 cd05093 PTKc_TrkB Catalytic do 98.9 2.3E-08 5.1E-13 64.9 9.2 66 20-87 34-100 (288)
273 cd05086 PTKc_Aatyk2 Catalytic 98.9 1.8E-08 3.8E-13 64.9 8.5 65 22-87 23-88 (268)
274 KOG0599|consensus 98.9 3.1E-09 6.8E-14 70.3 5.0 74 13-86 34-115 (411)
275 KOG0033|consensus 98.9 1.3E-10 2.8E-15 75.7 -1.4 74 12-86 27-103 (355)
276 PTZ00024 cyclin-dependent prot 98.9 1.8E-08 3.9E-13 66.8 8.7 76 11-87 24-112 (335)
277 cd08223 STKc_Nek4 Catalytic do 98.9 3.4E-08 7.3E-13 62.8 9.6 76 11-87 15-93 (257)
278 cd05576 STKc_RPK118_like Catal 98.9 9.2E-09 2E-13 65.3 7.0 70 11-87 8-78 (237)
279 cd07840 STKc_CDK9_like Catalyt 98.9 2E-08 4.4E-13 64.5 8.6 76 11-87 14-92 (287)
280 cd05613 STKc_MSK1_N N-terminal 98.9 2.5E-08 5.5E-13 64.7 9.0 76 12-87 16-98 (290)
281 cd06634 STKc_TAO2 Catalytic do 98.9 5E-08 1.1E-12 64.1 10.4 74 11-85 30-105 (308)
282 cd05113 PTKc_Btk_Bmx Catalytic 98.9 2E-08 4.4E-13 64.2 8.3 72 12-87 20-92 (256)
283 cd05581 STKc_PDK1 Catalytic do 98.9 7.2E-09 1.6E-13 66.4 6.2 78 11-88 16-96 (280)
284 cd07856 STKc_Sty1_Hog1 Catalyt 98.9 3E-08 6.4E-13 66.0 9.3 76 11-87 25-102 (328)
285 cd07835 STKc_CDK1_like Catalyt 98.9 1.2E-08 2.6E-13 65.9 7.2 76 11-87 14-90 (283)
286 PHA03212 serine/threonine kina 98.9 2.1E-08 4.6E-13 68.5 8.6 68 11-86 107-174 (391)
287 cd05078 PTK_Jak2_Jak3_rpt1 Pse 98.9 5.5E-09 1.2E-13 66.8 5.4 75 11-87 10-92 (258)
288 cd05072 PTKc_Lyn Catalytic dom 98.9 2.5E-08 5.4E-13 63.7 8.4 73 11-87 21-94 (261)
289 cd05094 PTKc_TrkC Catalytic do 98.9 3E-08 6.6E-13 64.5 8.8 66 20-87 34-100 (291)
290 KOG0594|consensus 98.9 2E-08 4.3E-13 67.2 8.0 77 11-88 26-110 (323)
291 cd05040 PTKc_Ack_like Catalyti 98.9 3.2E-08 7E-13 63.0 8.8 74 12-87 11-88 (257)
292 cd07842 STKc_CDK8_like Catalyt 98.9 2.4E-08 5.2E-13 65.3 8.3 74 11-85 15-94 (316)
293 PHA03390 pk1 serine/threonine- 98.9 3.5E-08 7.7E-13 63.7 8.9 72 11-88 31-103 (267)
294 cd05068 PTKc_Frk_like Catalyti 98.8 3.2E-08 6.9E-13 63.3 8.5 73 11-87 21-94 (261)
295 cd05060 PTKc_Syk_like Catalyti 98.8 5.3E-08 1.2E-12 62.1 9.4 74 12-87 11-88 (257)
296 cd05034 PTKc_Src_like Catalyti 98.8 4.8E-08 1E-12 62.3 9.0 72 12-87 22-94 (261)
297 cd05037 PTK_Jak_rpt1 Pseudokin 98.8 2E-08 4.4E-13 63.8 7.3 73 11-87 10-93 (259)
298 cd05091 PTKc_Ror2 Catalytic do 98.8 3.9E-08 8.5E-13 63.5 8.6 75 11-86 20-100 (283)
299 cd05056 PTKc_FAK Catalytic dom 98.8 4.2E-08 9.2E-13 63.0 8.6 74 12-87 22-99 (270)
300 cd05092 PTKc_TrkA Catalytic do 98.8 5.8E-08 1.3E-12 62.9 9.2 66 20-87 34-100 (280)
301 cd05108 PTKc_EGFR Catalytic do 98.8 3.8E-08 8.3E-13 64.8 8.4 75 11-87 22-101 (316)
302 cd05123 STKc_AGC Catalytic dom 98.8 2.3E-08 5E-13 63.2 7.1 76 11-87 8-86 (250)
303 cd07845 STKc_CDK10 Catalytic d 98.8 4.2E-08 9.1E-13 64.3 8.6 76 11-87 22-100 (309)
304 cd05606 STKc_beta_ARK Catalyti 98.8 8.9E-08 1.9E-12 62.1 9.7 76 11-87 9-90 (278)
305 cd05633 STKc_GRK3 Catalytic do 98.8 1.2E-07 2.6E-12 61.5 10.3 77 11-87 9-90 (279)
306 KOG4721|consensus 98.8 6E-09 1.3E-13 74.4 4.4 65 15-88 141-206 (904)
307 cd07830 STKc_MAK_like Catalyti 98.8 1.6E-08 3.4E-13 65.2 5.7 77 11-87 14-90 (283)
308 cd07874 STKc_JNK3 Catalytic do 98.8 5.6E-08 1.2E-12 65.0 8.6 74 11-85 32-112 (355)
309 cd07864 STKc_CDK12 Catalytic d 98.8 5E-08 1.1E-12 63.5 8.1 75 11-86 22-107 (302)
310 cd07852 STKc_MAPK15 Catalytic 98.8 6.1E-08 1.3E-12 64.4 8.6 77 11-87 22-101 (337)
311 cd07850 STKc_JNK Catalytic dom 98.8 6.8E-08 1.5E-12 64.6 8.8 75 11-86 31-112 (353)
312 cd07875 STKc_JNK1 Catalytic do 98.8 6.1E-08 1.3E-12 65.1 8.6 74 11-85 39-119 (364)
313 cd07863 STKc_CDK4 Catalytic do 98.8 5.9E-08 1.3E-12 62.7 8.2 77 11-87 15-99 (288)
314 cd05116 PTKc_Syk Catalytic dom 98.8 9.3E-08 2E-12 61.0 9.0 75 11-87 10-88 (257)
315 cd07865 STKc_CDK9 Catalytic do 98.8 7.4E-08 1.6E-12 62.7 8.6 75 11-86 27-110 (310)
316 cd05058 PTKc_Met_Ron Catalytic 98.8 6.9E-08 1.5E-12 61.6 8.3 75 12-87 11-90 (262)
317 cd05112 PTKc_Itk Catalytic dom 98.8 1E-07 2.3E-12 60.6 9.0 72 12-87 20-92 (256)
318 cd07849 STKc_ERK1_2_like Catal 98.8 5.6E-08 1.2E-12 64.6 7.9 75 11-86 20-99 (336)
319 cd05043 PTK_Ryk Pseudokinase d 98.8 1.1E-07 2.3E-12 61.4 9.0 75 12-87 22-102 (280)
320 smart00220 S_TKc Serine/Threon 98.8 5.9E-08 1.3E-12 60.4 7.3 76 11-87 4-80 (244)
321 PTZ00283 serine/threonine prot 98.8 1.3E-07 2.7E-12 66.6 9.7 76 11-87 47-132 (496)
322 cd05035 PTKc_Axl_like Catalyti 98.7 1.5E-07 3.3E-12 60.2 9.2 74 12-86 15-99 (273)
323 KOG4645|consensus 98.7 1E-09 2.2E-14 83.1 -1.0 77 11-88 1250-1328(1509)
324 cd07862 STKc_CDK6 Catalytic do 98.7 1.3E-07 2.8E-12 61.3 8.8 77 11-87 16-101 (290)
325 cd05071 PTKc_Src Catalytic dom 98.7 8.5E-08 1.8E-12 61.5 7.9 72 11-87 21-93 (262)
326 cd07829 STKc_CDK_like Catalyti 98.7 2.3E-08 5E-13 64.2 5.2 77 11-88 14-91 (282)
327 KOG0662|consensus 98.7 2.2E-08 4.7E-13 63.1 4.7 76 12-88 18-94 (292)
328 cd05118 STKc_CMGC Catalytic do 98.7 5E-08 1.1E-12 62.7 6.6 76 11-87 14-90 (283)
329 KOG1027|consensus 98.7 1.9E-08 4.2E-13 73.6 4.9 66 18-87 530-595 (903)
330 cd05077 PTK_Jak1_rpt1 Pseudoki 98.7 8.3E-08 1.8E-12 61.7 7.3 65 21-87 32-97 (262)
331 PRK10345 hypothetical protein; 98.7 1.7E-07 3.7E-12 59.6 8.6 69 17-87 21-100 (210)
332 cd05067 PTKc_Lck_Blk Catalytic 98.7 1.9E-07 4E-12 59.7 8.7 71 12-87 22-93 (260)
333 PTZ00036 glycogen synthase kin 98.7 1.4E-07 3.1E-12 65.3 8.7 70 11-86 81-158 (440)
334 KOG4257|consensus 98.7 4.8E-08 1E-12 70.5 6.4 65 22-88 419-484 (974)
335 cd05583 STKc_MSK_N N-terminal 98.7 1.2E-07 2.6E-12 61.5 7.8 76 12-87 16-98 (288)
336 KOG0200|consensus 98.7 5.5E-08 1.2E-12 70.0 6.7 68 21-88 328-396 (609)
337 cd07838 STKc_CDK4_6_like Catal 98.7 2.6E-07 5.7E-12 59.5 9.3 77 11-87 14-98 (287)
338 cd00180 PKc Catalytic domain o 98.7 4.5E-07 9.7E-12 54.9 9.8 77 11-88 8-85 (215)
339 cd07855 STKc_ERK5 Catalytic do 98.7 5.7E-08 1.2E-12 64.5 6.2 75 11-86 20-99 (334)
340 smart00221 STYKc Protein kinas 98.7 3.2E-07 6.9E-12 56.8 8.9 76 11-87 14-90 (225)
341 cd07880 STKc_p38gamma_MAPK12 C 98.7 2.3E-07 4.9E-12 62.0 8.7 76 11-87 30-112 (343)
342 cd07834 STKc_MAPK Catalytic do 98.7 7.7E-08 1.7E-12 63.5 6.3 76 11-87 15-96 (330)
343 cd07878 STKc_p38beta_MAPK11 Ca 98.7 9.4E-08 2E-12 63.6 6.6 76 11-87 30-112 (343)
344 PHA03211 serine/threonine kina 98.7 2E-07 4.3E-12 65.2 8.3 68 11-86 184-251 (461)
345 cd05073 PTKc_Hck Catalytic dom 98.7 2E-07 4.4E-12 59.6 7.7 72 11-87 21-93 (260)
346 KOG0199|consensus 98.7 3.5E-08 7.6E-13 71.8 4.5 63 23-87 140-203 (1039)
347 cd07868 STKc_CDK8 Catalytic do 98.7 2.9E-07 6.3E-12 60.5 8.6 72 11-86 16-91 (317)
348 cd05070 PTKc_Fyn_Yrk Catalytic 98.7 3.5E-07 7.6E-12 58.4 8.7 71 12-87 22-93 (260)
349 cd07858 STKc_TEY_MAPK_plant Ca 98.7 1.4E-07 3.1E-12 62.7 7.1 76 11-87 20-101 (337)
350 cd05069 PTKc_Yes Catalytic dom 98.6 3.1E-07 6.7E-12 58.7 8.5 71 12-87 22-93 (260)
351 PHA03209 serine/threonine kina 98.6 2E-07 4.3E-12 62.7 7.6 68 11-86 81-148 (357)
352 cd05109 PTKc_HER2 Catalytic do 98.6 5.2E-07 1.1E-11 58.2 9.2 75 11-87 22-101 (279)
353 cd05111 PTK_HER3 Pseudokinase 98.6 4.3E-07 9.4E-12 58.8 8.8 75 11-87 22-101 (279)
354 cd07867 STKc_CDC2L6 Catalytic 98.6 5E-07 1.1E-11 59.2 9.0 72 11-86 16-91 (317)
355 cd05075 PTKc_Axl Catalytic dom 98.6 5.3E-07 1.2E-11 57.8 8.9 74 11-85 14-97 (272)
356 cd05083 PTKc_Chk Catalytic dom 98.6 4.1E-07 8.8E-12 57.9 8.1 65 18-87 26-91 (254)
357 cd07854 STKc_MAPK4_6 Catalytic 98.6 2.6E-07 5.5E-12 61.7 7.3 74 11-86 20-107 (342)
358 KOG4279|consensus 98.6 3.8E-08 8.2E-13 71.9 3.2 74 12-87 591-665 (1226)
359 cd08222 STKc_Nek11 Catalytic d 98.6 9E-08 1.9E-12 61.1 4.6 76 11-87 15-95 (260)
360 cd05110 PTKc_HER4 Catalytic do 98.6 7E-07 1.5E-11 58.5 8.8 75 11-87 22-101 (303)
361 KOG1151|consensus 98.6 1.2E-07 2.5E-12 66.5 5.2 76 12-88 479-562 (775)
362 cd07857 STKc_MPK1 Catalytic do 98.6 9E-07 1.9E-11 58.8 9.1 76 11-86 15-97 (332)
363 KOG0658|consensus 98.6 6.1E-08 1.3E-12 65.5 3.4 70 12-87 40-114 (364)
364 PRK09188 serine/threonine prot 98.6 5.5E-07 1.2E-11 61.5 8.1 68 11-83 33-107 (365)
365 cd07877 STKc_p38alpha_MAPK14 C 98.6 9E-07 2E-11 59.2 9.0 76 11-87 32-114 (345)
366 cd05082 PTKc_Csk Catalytic dom 98.5 1.1E-06 2.4E-11 56.0 8.8 65 19-87 27-93 (256)
367 cd07851 STKc_p38 Catalytic dom 98.5 2.1E-07 4.6E-12 62.1 5.3 76 11-87 30-112 (343)
368 KOG0596|consensus 98.5 2.6E-07 5.6E-12 65.7 5.6 77 11-88 376-453 (677)
369 KOG0612|consensus 98.5 1.9E-08 4.1E-13 75.7 -0.0 76 12-88 91-169 (1317)
370 KOG1035|consensus 98.5 7.2E-08 1.6E-12 73.0 2.9 57 11-68 494-550 (1351)
371 KOG0584|consensus 98.5 1.1E-07 2.3E-12 68.0 3.3 77 11-88 55-137 (632)
372 KOG0690|consensus 98.5 7.1E-08 1.5E-12 65.3 2.2 71 11-82 183-256 (516)
373 KOG0604|consensus 98.5 5.1E-08 1.1E-12 65.2 1.4 71 10-86 76-151 (400)
374 cd05074 PTKc_Tyro3 Catalytic d 98.5 2.1E-06 4.7E-11 55.0 8.5 75 11-86 14-99 (273)
375 cd07866 STKc_BUR1 Catalytic do 98.4 8.6E-07 1.9E-11 57.7 6.6 74 11-85 23-105 (311)
376 PHA03207 serine/threonine kina 98.4 1.9E-06 4.1E-11 58.7 8.2 69 11-86 107-177 (392)
377 KOG0695|consensus 98.4 1E-07 2.2E-12 64.9 1.6 72 11-82 265-339 (593)
378 KOG2052|consensus 98.4 5E-07 1.1E-11 62.8 4.7 69 16-88 229-303 (513)
379 cd07879 STKc_p38delta_MAPK13 C 98.4 1.5E-06 3.2E-11 58.1 6.9 74 11-85 30-110 (342)
380 KOG0696|consensus 98.4 1.9E-08 4.2E-13 69.7 -2.4 78 11-88 364-444 (683)
381 KOG0666|consensus 98.3 1.1E-07 2.5E-12 63.9 0.4 77 11-88 39-121 (438)
382 KOG3653|consensus 98.3 1.3E-06 2.7E-11 61.2 4.9 67 18-88 230-302 (534)
383 KOG1152|consensus 98.2 1.2E-06 2.6E-11 62.8 3.3 76 11-87 576-663 (772)
384 PRK10359 lipopolysaccharide co 98.2 9.7E-06 2.1E-10 52.4 7.0 73 10-85 45-134 (232)
385 KOG2345|consensus 98.2 8E-07 1.7E-11 58.1 1.5 76 11-88 36-117 (302)
386 KOG0608|consensus 98.1 2.3E-06 5E-11 62.3 3.4 76 11-87 644-722 (1034)
387 PTZ00284 protein kinase; Provi 98.1 3.6E-05 7.7E-10 53.6 9.0 74 11-86 144-223 (467)
388 KOG0193|consensus 98.1 8.2E-06 1.8E-10 58.6 5.4 62 23-86 416-479 (678)
389 PRK14879 serine/threonine prot 98.1 2.8E-05 6E-10 48.5 7.0 73 12-87 12-92 (211)
390 KOG0668|consensus 98.1 5.3E-06 1.2E-10 54.1 3.7 71 13-87 55-128 (338)
391 KOG1025|consensus 98.1 1.4E-06 3.1E-11 64.7 1.2 65 22-88 726-791 (1177)
392 KOG1345|consensus 98.0 2.3E-06 5E-11 56.8 1.9 73 10-84 38-112 (378)
393 KOG1167|consensus 98.0 6.4E-06 1.4E-10 56.7 4.1 66 20-88 63-129 (418)
394 KOG1290|consensus 98.0 6.1E-05 1.3E-09 53.3 8.3 75 12-88 94-179 (590)
395 cd05147 RIO1_euk RIO kinase fa 98.0 2.3E-05 5E-10 49.0 5.2 69 11-83 12-106 (190)
396 KOG0603|consensus 97.9 6.3E-06 1.4E-10 59.1 2.3 71 11-86 337-409 (612)
397 TIGR03724 arch_bud32 Kae1-asso 97.9 9.2E-05 2E-09 45.8 6.6 73 12-87 10-90 (199)
398 PHA03210 serine/threonine kina 97.8 9.2E-05 2E-09 52.3 7.1 48 37-85 206-253 (501)
399 cd05145 RIO1_like RIO kinase f 97.8 0.00021 4.6E-09 44.4 7.0 68 11-82 12-105 (190)
400 KOG0614|consensus 97.7 1.1E-06 2.4E-11 62.3 -3.6 76 11-87 435-513 (732)
401 KOG0665|consensus 97.7 6.9E-06 1.5E-10 55.3 0.2 71 15-86 35-112 (369)
402 KOG1163|consensus 97.5 0.00028 6.1E-09 46.5 5.3 73 12-87 31-103 (341)
403 cd05120 APH_ChoK_like Aminogly 97.5 0.00025 5.4E-09 41.0 4.7 60 20-82 20-81 (155)
404 PRK09605 bifunctional UGMP fam 97.4 0.0017 3.7E-08 46.3 8.5 48 38-86 380-428 (535)
405 KOG0670|consensus 97.4 0.00021 4.5E-09 51.4 3.4 72 15-88 451-527 (752)
406 PRK12274 serine/threonine prot 97.4 0.0016 3.5E-08 41.9 7.1 62 20-85 24-89 (218)
407 COG0515 SPS1 Serine/threonine 97.2 0.0061 1.3E-07 38.5 8.8 65 22-87 23-91 (384)
408 KOG0195|consensus 97.2 3.8E-05 8.2E-10 51.4 -1.6 70 17-87 209-280 (448)
409 KOG0669|consensus 97.2 7E-06 1.5E-10 54.2 -5.0 75 12-87 33-116 (376)
410 smart00090 RIO RIO-like kinase 97.2 0.0021 4.6E-08 41.5 6.2 69 11-84 43-138 (237)
411 PRK04750 ubiB putative ubiquin 97.1 0.00042 9.2E-09 49.7 2.6 20 12-31 135-154 (537)
412 KOG0986|consensus 97.1 0.00023 4.9E-09 50.3 1.2 71 12-83 201-274 (591)
413 cd05144 RIO2_C RIO kinase fami 97.0 0.0025 5.4E-08 39.6 5.4 68 12-85 31-122 (198)
414 PLN03224 probable serine/threo 97.0 0.0024 5.2E-08 45.7 5.5 67 19-87 184-278 (507)
415 KOG0671|consensus 96.9 0.0015 3.2E-08 45.2 3.5 76 11-88 104-184 (415)
416 KOG1164|consensus 96.7 0.012 2.6E-07 39.4 6.9 75 12-87 34-113 (322)
417 KOG0664|consensus 96.4 0.00011 2.4E-09 49.2 -3.9 71 14-85 71-147 (449)
418 KOG1243|consensus 96.3 0.012 2.6E-07 43.3 5.2 60 18-79 34-93 (690)
419 KOG1165|consensus 96.2 0.012 2.7E-07 40.5 4.8 73 13-88 45-117 (449)
420 cd05154 ACAD10_11_like Acyl-Co 96.2 0.0053 1.2E-07 38.1 2.8 64 21-84 22-90 (223)
421 KOG3741|consensus 96.0 0.014 3E-07 42.3 4.5 72 12-85 292-369 (655)
422 PHA02882 putative serine/threo 95.9 0.14 3.1E-06 33.4 8.6 75 11-86 27-118 (294)
423 TIGR01982 UbiB 2-polyprenylphe 95.9 0.025 5.5E-07 39.7 5.2 20 67-86 230-250 (437)
424 PRK01723 3-deoxy-D-manno-octul 95.8 0.12 2.5E-06 33.5 7.8 67 20-87 54-140 (239)
425 PLN03225 Serine/threonine-prot 95.6 0.035 7.7E-07 40.2 5.3 71 11-87 147-228 (566)
426 cd05151 ChoK Choline Kinase (C 95.5 0.031 6.7E-07 33.4 4.0 59 20-82 20-79 (170)
427 cd05150 APH Aminoglycoside 3'- 95.1 0.16 3.4E-06 32.4 6.5 60 21-84 22-82 (244)
428 cd05119 RIO RIO kinase family, 94.6 0.15 3.2E-06 31.0 5.4 20 11-31 12-31 (187)
429 PLN02876 acyl-CoA dehydrogenas 94.5 0.13 2.9E-06 38.8 5.8 59 23-81 67-131 (822)
430 KOG1024|consensus 93.6 0.095 2.1E-06 37.1 3.3 60 27-87 320-381 (563)
431 COG2112 Predicted Ser/Thr prot 91.5 1 2.3E-05 28.6 5.6 62 18-86 42-104 (201)
432 KOG1023|consensus 91.2 0.22 4.8E-06 35.7 2.7 36 52-87 4-40 (484)
433 KOG1166|consensus 90.4 0.14 3E-06 39.5 1.3 71 11-86 713-786 (974)
434 COG3642 Mn2+-dependent serine/ 89.4 0.85 1.8E-05 29.1 4.0 49 38-87 43-92 (204)
435 KOG0603|consensus 88.0 0.078 1.7E-06 38.8 -1.4 64 18-81 19-84 (612)
436 PRK09550 mtnK methylthioribose 87.9 3.7 8E-05 28.9 6.7 61 22-84 52-122 (401)
437 PRK15123 lipopolysaccharide co 87.7 6.1 0.00013 26.2 8.1 69 17-86 41-128 (268)
438 PF01636 APH: Phosphotransfera 87.4 4.9 0.00011 24.7 7.0 59 22-83 21-84 (239)
439 TIGR02172 Fb_sc_TIGR02172 Fibr 85.2 3.1 6.8E-05 26.6 4.9 56 21-79 22-78 (226)
440 KOG0576|consensus 84.1 0.43 9.3E-06 35.8 0.6 38 41-79 280-318 (829)
441 KOG3087|consensus 81.4 9.7 0.00021 24.7 5.8 71 16-87 25-104 (229)
442 cd05157 ETNK_euk Ethanolamine 80.9 3.8 8.2E-05 25.8 4.0 56 21-82 24-80 (235)
443 PRK10593 hypothetical protein; 79.3 4.3 9.3E-05 27.1 4.0 43 39-81 52-100 (297)
444 KOG0601|consensus 76.1 1.2 2.6E-05 32.4 0.8 64 19-82 289-354 (524)
445 TIGR02906 spore_CotS spore coa 74.6 19 0.00041 23.6 6.1 65 10-81 10-82 (313)
446 COG0661 AarF Predicted unusual 74.2 14 0.00029 27.1 5.6 18 67-84 238-256 (517)
447 KOG0590|consensus 72.2 0.83 1.8E-05 33.6 -0.8 65 20-84 45-111 (601)
448 KOG1093|consensus 71.2 12 0.00027 28.0 4.8 49 39-88 27-76 (725)
449 PF01163 RIO1: RIO1 family; I 69.6 5.5 0.00012 25.0 2.5 42 39-84 53-98 (188)
450 PF03881 Fructosamin_kin: Fruc 69.5 31 0.00067 23.1 7.0 57 19-79 38-96 (288)
451 PF06176 WaaY: Lipopolysacchar 69.1 30 0.00064 22.7 6.4 16 68-83 116-132 (229)
452 KOG0590|consensus 67.6 1.1 2.3E-05 33.1 -1.1 45 41-86 368-412 (601)
453 KOG4158|consensus 67.0 4.7 0.0001 29.1 2.0 35 52-86 273-334 (598)
454 KOG1266|consensus 61.1 1.9 4.1E-05 30.2 -0.7 35 53-87 125-165 (458)
455 TIGR02721 ycfN_thiK thiamine k 60.6 11 0.00024 24.1 2.8 58 20-82 18-76 (256)
456 PF10707 YrbL-PhoP_reg: PhoP r 60.0 42 0.0009 21.3 7.4 35 53-87 75-116 (199)
457 COG3001 Uncharacterized protei 59.1 18 0.0004 24.3 3.5 42 38-79 52-95 (286)
458 KOG1033|consensus 58.2 2.3 5E-05 30.9 -0.8 46 21-67 74-119 (516)
459 PLN00181 protein SPA1-RELATED; 57.4 1.9 4.1E-05 32.5 -1.3 35 53-87 30-72 (793)
460 PF01797 Y1_Tnp: Transposase I 57.3 33 0.00071 19.2 4.6 31 57-87 39-70 (121)
461 cd05153 HomoserineK_II Homoser 55.8 20 0.00044 23.3 3.4 58 21-82 37-102 (296)
462 cd05155 APH_ChoK_like_1 Unchar 55.3 18 0.00039 22.9 3.1 46 38-83 32-83 (235)
463 KOG0601|consensus 52.8 5.1 0.00011 29.3 0.3 67 18-84 140-207 (524)
464 cd05146 RIO3_euk RIO kinase fa 51.9 19 0.00041 22.9 2.7 33 43-79 75-108 (197)
465 PF06293 Kdo: Lipopolysacchari 49.9 62 0.0013 20.2 5.7 48 39-87 56-111 (206)
466 cd05156 ChoK_euk Choline Kinas 48.4 20 0.00044 23.5 2.5 56 21-82 29-85 (302)
467 KOG1035|consensus 45.0 16 0.00034 29.8 1.8 24 65-88 666-690 (1351)
468 KOG1240|consensus 43.7 5.1 0.00011 32.3 -0.9 66 18-85 43-111 (1431)
469 PF14531 Kinase-like: Kinase-l 42.2 1.1E+02 0.0023 20.8 6.7 37 11-47 27-65 (288)
470 KOG4720|consensus 41.8 10 0.00022 26.3 0.4 35 44-82 128-163 (391)
471 PRK09902 hypothetical protein; 40.5 1E+02 0.0022 20.0 7.0 67 20-87 40-119 (216)
472 TIGR01767 MTRK 5-methylthiorib 40.3 1.3E+02 0.0028 21.3 5.5 70 13-84 12-91 (370)
473 PLN02756 S-methyl-5-thioribose 39.5 81 0.0017 22.6 4.5 57 21-79 55-119 (418)
474 COG0478 RIO-like serine/threon 36.1 34 0.00074 23.4 2.1 40 40-83 155-196 (304)
475 COG1669 Predicted nucleotidylt 35.0 76 0.0016 18.0 3.1 30 57-86 26-61 (97)
476 PTZ00384 choline kinase; Provi 33.8 32 0.0007 24.1 1.8 37 42-82 100-137 (383)
477 PF05077 DUF678: Protein of un 31.7 19 0.0004 19.3 0.3 15 4-18 6-20 (74)
478 COG3173 Predicted aminoglycosi 30.4 1.8E+02 0.004 20.0 4.9 58 21-79 48-109 (321)
479 PRK12396 5-methylribose kinase 30.4 88 0.0019 22.4 3.5 63 21-85 54-125 (409)
480 PLN02667 inositol polyphosphat 29.1 81 0.0018 21.3 3.0 21 55-75 61-84 (286)
481 COG4186 Predicted phosphoester 28.8 74 0.0016 20.0 2.6 14 66-79 45-58 (186)
482 PF09192 Act-Frag_cataly: Acti 26.8 21 0.00045 24.1 -0.1 16 69-84 122-138 (275)
483 PF01633 Choline_kinase: Choli 26.5 1.2E+02 0.0026 18.8 3.4 56 21-82 2-58 (211)
484 KOG1235|consensus 26.0 21 0.00046 26.3 -0.1 16 68-83 275-291 (538)
485 PF15632 ATPgrasp_Ter: ATP-gra 24.1 35 0.00077 23.5 0.7 13 67-79 196-208 (329)
486 PF01947 DUF98: Protein of unk 23.9 65 0.0014 19.4 1.7 32 53-84 117-148 (149)
487 COG4471 Uncharacterized protei 22.4 1.3E+02 0.0029 16.8 2.6 23 65-88 31-54 (90)
488 TIGR00938 thrB_alt homoserine 21.8 2.5E+02 0.0054 18.5 6.0 58 21-81 45-110 (307)
489 PF13786 DUF4179: Domain of un 21.7 31 0.00066 18.6 0.0 15 60-74 74-88 (94)
490 cd05124 AFK Actin-Fragmin Kina 20.9 42 0.00092 22.2 0.5 16 69-84 91-107 (238)
491 TIGR02904 spore_ysxE spore coa 20.1 2.8E+02 0.006 18.4 8.6 64 11-79 21-90 (309)
No 1
>KOG0581|consensus
Probab=99.72 E-value=7.4e-17 Score=107.81 Aligned_cols=76 Identities=26% Similarity=0.386 Sum_probs=70.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~ 87 (89)
-|+.|.|+.|+..+|+|.|..+.+....+++.+|++++... +||+||.|||+|..++ .+.|+||||++ ||+++++.
T Consensus 94 ~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~ 171 (364)
T KOG0581|consen 94 TVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKR 171 (364)
T ss_pred EEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhh
Confidence 37899999999999999997777777889999999999885 9999999999999999 59999999999 99999985
No 2
>KOG0595|consensus
Probab=99.67 E-value=5.1e-16 Score=105.09 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=68.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.|+.+.++.++..||||.|.... .....+-+..|+.+|.. +.|||||+++++...++.+|+|||||+| +|.++|++.
T Consensus 25 vVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLke-l~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~ 103 (429)
T KOG0595|consen 25 VVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKE-LKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR 103 (429)
T ss_pred EEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHh-cCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc
Confidence 47899999999999999997653 45567788999999988 5899999999999999999999999999 999999864
No 3
>KOG0615|consensus
Probab=99.55 E-value=2.4e-14 Score=97.42 Aligned_cols=74 Identities=9% Similarity=0.058 Sum_probs=61.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
.|++|..+.||+.||+|++...... .....+.+|+.||++ ++|||||++++.|..++..|+||||++| +|-+
T Consensus 187 ~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkk-L~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd 265 (475)
T KOG0615|consen 187 LVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKK-LSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFD 265 (475)
T ss_pred EEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHh-cCCCCEEEEeeeeecCCceEEEEEEecCccHHH
Confidence 5889999999999999999863211 123456799999998 5999999999999999999999999999 7655
Q ss_pred HH
Q psy13291 84 FY 85 (89)
Q Consensus 84 ~l 85 (89)
.+
T Consensus 266 ~v 267 (475)
T KOG0615|consen 266 KV 267 (475)
T ss_pred HH
Confidence 44
No 4
>KOG0582|consensus
Probab=99.53 E-value=6.9e-14 Score=96.01 Aligned_cols=76 Identities=13% Similarity=0.130 Sum_probs=68.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
-|++|+..++++.||||+++........+.+.+|++.|+. ++||||+.++.+|..+..+|+||.||.+ |+.++++.
T Consensus 41 ~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl-~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~ 117 (516)
T KOG0582|consen 41 VVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSL-IDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKT 117 (516)
T ss_pred EeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhh-cCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHH
Confidence 4789999999999999999976555558889999999765 6999999999999999999999999999 99999864
No 5
>KOG0575|consensus
Probab=99.50 E-value=1.6e-13 Score=96.50 Aligned_cols=77 Identities=14% Similarity=0.166 Sum_probs=66.3
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+++.+....+|+.||+|+++.. ......+.+.+|++|... +.|||||+++++|.+.+++||++|+|+. +|..++++
T Consensus 33 ~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~-L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Kr 111 (592)
T KOG0575|consen 33 RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRS-LKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKR 111 (592)
T ss_pred EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHh-cCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHh
Confidence 3566777789999999999863 234457889999999766 6999999999999999999999999999 99999985
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 112 r 112 (592)
T KOG0575|consen 112 R 112 (592)
T ss_pred c
Confidence 3
No 6
>KOG0611|consensus
Probab=99.47 E-value=6.8e-14 Score=95.96 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=67.3
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
||.+|....+|+.||||.|... .+..+.-.+.+|++||+. ++|||||++|.+|...+.+.|||||..+ .|.+++..
T Consensus 68 KVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSs-LNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSe 146 (668)
T KOG0611|consen 68 KVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSS-LNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISE 146 (668)
T ss_pred ceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhh-cCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHH
Confidence 7899999999999999999764 344456678999999877 6999999999999999999999999999 99999865
No 7
>KOG0610|consensus
Probab=99.43 E-value=5.2e-13 Score=90.95 Aligned_cols=77 Identities=16% Similarity=0.005 Sum_probs=68.2
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+||..+.++..+|+|+|+.. .......+++.|-+||+. ++||+++.+|+.|..+...+++||||+| +|..++++
T Consensus 92 ~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~-lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~Lrqk 170 (459)
T KOG0610|consen 92 TVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSL-LDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQK 170 (459)
T ss_pred eEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHh-cCCCccchhhheeeccceeEEEEecCCCccHHHHHhh
Confidence 5899999999999999999874 234456778899999987 5999999999999999999999999999 99999876
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
-
T Consensus 171 Q 171 (459)
T KOG0610|consen 171 Q 171 (459)
T ss_pred C
Confidence 3
No 8
>KOG0586|consensus
Probab=99.42 E-value=1.4e-12 Score=91.86 Aligned_cols=78 Identities=19% Similarity=0.208 Sum_probs=68.6
Q ss_pred ccceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+|.|+.+..||..||+|.|+.+. +....+.+.+|+++|.. ++||||++++++...+..+|+||||+.+ .+.++|.+
T Consensus 70 ~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~-l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~ 148 (596)
T KOG0586|consen 70 AKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKS-LNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVK 148 (596)
T ss_pred EEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHh-cCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHh
Confidence 478999999999999999998753 44456779999999766 6999999999999999999999999999 99888876
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
+
T Consensus 149 ~ 149 (596)
T KOG0586|consen 149 H 149 (596)
T ss_pred c
Confidence 4
No 9
>KOG1006|consensus
Probab=99.39 E-value=2.3e-13 Score=88.98 Aligned_cols=76 Identities=45% Similarity=0.727 Sum_probs=67.8
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
|....|+.+|..+|||+|..+....+..+++.|....++..+.||||+|||+.+.++..||.||+|+-||+.+.+.
T Consensus 80 V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~SlDklYk~ 155 (361)
T KOG1006|consen 80 VNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDISLDKLYKR 155 (361)
T ss_pred hhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhhHHHHHHH
Confidence 3445688999999999999887777788999999988887899999999999999999999999999999988764
No 10
>KOG0577|consensus
Probab=99.38 E-value=3.5e-13 Score=95.72 Aligned_cols=75 Identities=12% Similarity=0.248 Sum_probs=65.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.||.|....+.+.||||.+.-.+ ..+.+++++.|+.+|.+ +.|||+|.|.|||..+...|+|||||-||..+++.
T Consensus 41 AVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~-l~HPntieYkgCyLre~TaWLVMEYClGSAsDlle 117 (948)
T KOG0577|consen 41 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQ-LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDLLE 117 (948)
T ss_pred eeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHh-ccCCCcccccceeeccchHHHHHHHHhccHHHHHH
Confidence 57889999999999999998653 34578999999999998 59999999999999999999999999996666654
No 11
>KOG0578|consensus
Probab=99.38 E-value=4.2e-13 Score=93.77 Aligned_cols=75 Identities=17% Similarity=0.246 Sum_probs=65.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
|++|.-..++..||+|+++..... ..+.++.|+.+|.. .+|+|||.|+++|...+.+|++||||+| +|.+++...
T Consensus 289 vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~-~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~~ 364 (550)
T KOG0578|consen 289 VYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRD-LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTKT 364 (550)
T ss_pred eeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHh-ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhcc
Confidence 678888889999999999876443 36778999999876 6999999999999999999999999999 999987653
No 12
>KOG4717|consensus
Probab=99.38 E-value=1e-12 Score=92.34 Aligned_cols=77 Identities=14% Similarity=0.137 Sum_probs=67.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.|+||.|..||..||||+|+.+. ++.....+++|+.+|. +.+|||||++|.+.-.+..+|+++|+=++ +|.++|-++
T Consensus 33 VVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMK-LVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKH 111 (864)
T KOG4717|consen 33 VVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMK-LVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH 111 (864)
T ss_pred hhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHH-HhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhh
Confidence 57899999999999999999864 4445678999999964 57999999999999999999999999999 999998664
No 13
>KOG0574|consensus
Probab=99.38 E-value=2.3e-13 Score=90.62 Aligned_cols=72 Identities=17% Similarity=0.386 Sum_probs=63.6
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|..|.|+.+|..+|+|.++.. .+.+.+..|+.|+++ +..|++|+|||+|+....+|||||||.. |+.++++-
T Consensus 49 V~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQ-C~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~ 121 (502)
T KOG0574|consen 49 VHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQ-CKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRA 121 (502)
T ss_pred HHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHH-cCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHH
Confidence 445678899999999999753 347889999999988 5999999999999999999999999999 99999874
No 14
>KOG0588|consensus
Probab=99.37 E-value=1.1e-12 Score=93.49 Aligned_cols=77 Identities=9% Similarity=0.079 Sum_probs=64.5
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~ 86 (89)
+|.+|.|..||+..|||+|... ..+.....+.+|+.|| +++.||||+++|+++....++|+++||++| .++.+++
T Consensus 27 ~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviM-kLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~ 105 (786)
T KOG0588|consen 27 CVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIM-KLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVR 105 (786)
T ss_pred eehhhhcccccceeEEEeeccccccccccccchhhhhHHH-HHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHh
Confidence 5889999999999999999864 2333467788999995 567999999999999999999999999999 5566655
Q ss_pred hc
Q psy13291 87 KV 88 (89)
Q Consensus 87 ~~ 88 (89)
++
T Consensus 106 kG 107 (786)
T KOG0588|consen 106 KG 107 (786)
T ss_pred hC
Confidence 54
No 15
>KOG0194|consensus
Probab=99.36 E-value=6.7e-12 Score=87.43 Aligned_cols=64 Identities=19% Similarity=0.296 Sum_probs=57.6
Q ss_pred EEEEEEee--cCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 24 EWSFRITF--TVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 24 ~AvK~i~~--~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
||+|.... .........++.|.+++.. ++||||+++||+...+.+++|+||+|+| +|+++|++.
T Consensus 189 VAvK~~k~~~~~~~~~~~e~m~EArvMr~-l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~ 255 (474)
T KOG0194|consen 189 VAVKTTKGSSELTKEQIKEFMKEARVMRQ-LNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN 255 (474)
T ss_pred eEEEeecccccccHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhC
Confidence 89999985 3455678899999999887 6999999999999999999999999999 999999875
No 16
>KOG0201|consensus
Probab=99.36 E-value=2.5e-13 Score=92.88 Aligned_cols=77 Identities=13% Similarity=0.226 Sum_probs=70.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.|+.+....+++.||+|+++......+.+++.+|+.+|.+ +.+|||.++||+|..+..+||+||||.| ++.++++-.
T Consensus 28 ~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~-~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~ 105 (467)
T KOG0201|consen 28 EVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQ-CDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSG 105 (467)
T ss_pred eeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHh-cCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccC
Confidence 5889999999999999999987666678999999999998 5999999999999999999999999999 999888653
No 17
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.36 E-value=1.7e-11 Score=81.57 Aligned_cols=76 Identities=24% Similarity=0.349 Sum_probs=66.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|..+|+|.+...........+.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 20 ~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 96 (333)
T cd06650 20 VVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 96 (333)
T ss_pred EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH-CCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHH
Confidence 4778888889999999999865555556778999999988 4999999999999999999999999999 99998864
No 18
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.35 E-value=2e-11 Score=81.06 Aligned_cols=76 Identities=22% Similarity=0.359 Sum_probs=66.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|..+|+|.+.........+.+.+|+.+|.. ++||||+++++++...+.++++|||+++ +|.+++..
T Consensus 20 ~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 96 (331)
T cd06649 20 VVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHE-CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE 96 (331)
T ss_pred EEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHH-CCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHH
Confidence 4778888899999999999865555556789999999988 5999999999999999999999999999 99998864
No 19
>KOG0032|consensus
Probab=99.33 E-value=1.6e-11 Score=83.84 Aligned_cols=76 Identities=14% Similarity=0.078 Sum_probs=64.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+.|..+.+|..+|+|.++... .....+.+.+|+++|.++.+||||+.++++|...+.++++||+|+| .|-+.|.
T Consensus 50 ~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~ 128 (382)
T KOG0032|consen 50 VVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIV 128 (382)
T ss_pred EEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHH
Confidence 57889999999999999998642 2234678999999999975699999999999999999999999998 6655543
No 20
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.33 E-value=3.1e-11 Score=79.32 Aligned_cols=76 Identities=26% Similarity=0.399 Sum_probs=66.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|..+|+|.+...........+.+|+.++.++ +||||+++++++..++.++++|||+++ +|.+++++
T Consensus 16 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~ 92 (308)
T cd06615 16 VVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK 92 (308)
T ss_pred EEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHh
Confidence 46788888899999999987654555567788999999885 999999999999999999999999999 99999864
No 21
>KOG0984|consensus
Probab=99.33 E-value=4.1e-12 Score=80.82 Aligned_cols=76 Identities=62% Similarity=0.900 Sum_probs=69.6
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
++...+..+|..+|+|.+..+.+.....++++|+.+.+....+|++++|||.++.++.+||+||.|+.||+.+.++
T Consensus 62 vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~tSldkfy~~ 137 (282)
T KOG0984|consen 62 VEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDTSLDKFYRK 137 (282)
T ss_pred hhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhhhHHHHHHH
Confidence 5667889999999999999887788889999999998888899999999999999999999999999999988765
No 22
>KOG1026|consensus
Probab=99.33 E-value=3.1e-12 Score=92.59 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=60.8
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
...||||.++...+....++|.+|+++|.. ++|||||+++|++...+.+++++|||.. ||.++|+..
T Consensus 516 ~~lVAVK~LKd~a~~~~~~dF~REaeLla~-l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~ 583 (774)
T KOG1026|consen 516 EQLVAVKALKDKAENQARQDFRREAELLAE-LQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRAR 583 (774)
T ss_pred ceehhHhhhcccccHHHHHHHHHHHHHHHh-ccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhh
Confidence 357999999877777688999999999887 5999999999999999999999999999 999999753
No 23
>KOG0196|consensus
Probab=99.33 E-value=5.4e-12 Score=91.53 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=61.3
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhcC
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKVD 89 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~~ 89 (89)
..||||.++.........+|+.|..||-+ ++|||||++-|+......++|+.|||++ +||.+|+.+|
T Consensus 658 ~~VAIKTLK~GytekqrrdFL~EAsIMGQ-FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D 725 (996)
T KOG0196|consen 658 ITVAIKTLKAGYTEKQRRDFLSEASIMGQ-FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND 725 (996)
T ss_pred eeEEEeeeccCccHHHHhhhhhhhhhccc-CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC
Confidence 46999999876667778899999999988 5999999999999999999999999999 9999999875
No 24
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.31 E-value=3.8e-11 Score=79.49 Aligned_cols=76 Identities=12% Similarity=0.187 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++..+.+|+.+|+|.++... .....+.+..|+.++.. .+||||+++++++..++..|++|||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 92 (327)
T cd08227 15 TVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKL-FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICT 92 (327)
T ss_pred EEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHh
Confidence 46788889999999999997643 23345667789998776 5999999999999999999999999999 99998854
No 25
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.31 E-value=3.3e-11 Score=81.50 Aligned_cols=76 Identities=11% Similarity=0.119 Sum_probs=65.1
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....++..+|+|++... ......+.+..|+.++.. .+||||+++++++..++.+|++||||+| +|.+++.+
T Consensus 16 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (381)
T cd05626 16 EVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (381)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-cCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHh
Confidence 4788889999999999999753 223445678899999887 5999999999999999999999999999 99988864
No 26
>KOG0192|consensus
Probab=99.31 E-value=2.3e-11 Score=82.67 Aligned_cols=72 Identities=21% Similarity=0.181 Sum_probs=60.6
Q ss_pred EEEccCCCE-EEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291 15 GLARLDPDS-EWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 15 ~~~~~~~~~-~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~ 87 (89)
....+.|.. +|+|.+... .++...+.+.+|+.+|.+ ++|||||+|+|++..+. .+.||||||++ +|.+++.+
T Consensus 58 ~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~-l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~ 133 (362)
T KOG0192|consen 58 YKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSR-LRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHK 133 (362)
T ss_pred EEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence 345667887 999999753 233337789999999988 59999999999999987 89999999999 99999965
No 27
>KOG0600|consensus
Probab=99.30 E-value=1.4e-11 Score=85.73 Aligned_cols=76 Identities=12% Similarity=0.143 Sum_probs=65.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+.|....+|..||+|.+.... .+.......+|+.||.+ ++|||||++.+..... ..+|+|+|||+.+|..++..
T Consensus 132 ~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~-l~HpNIikL~eivt~~~~~siYlVFeYMdhDL~GLl~~ 210 (560)
T KOG0600|consen 132 QVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRR-LDHPNIIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLSS 210 (560)
T ss_pred heeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHh-cCCCcccceeeEEEecCCceEEEEEecccchhhhhhcC
Confidence 48899999999999999998654 44567788899999988 5999999999998886 68999999999988877643
No 28
>KOG0583|consensus
Probab=99.30 E-value=2e-11 Score=83.15 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeec-C---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-V---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
+|+++.+..+|..+|+|+++.. . .....+.+.+|+.++..+..||||++++.++...+.+|++||||.| +|.+++
T Consensus 32 kV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i 111 (370)
T KOG0583|consen 32 KVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYI 111 (370)
T ss_pred eEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHH
Confidence 6899999999999999977653 1 1123456678999988864599999999999999999999999999 888887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 112 ~~ 113 (370)
T KOG0583|consen 112 VN 113 (370)
T ss_pred HH
Confidence 65
No 29
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.30 E-value=3.2e-11 Score=81.28 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|+.+|+|.+.... .....+.+..|+.++.. .+||||+++++++..++.+|++|||++| +|.+++..
T Consensus 16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (377)
T cd05629 16 EVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIK 94 (377)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHh
Confidence 57888888999999999996531 22345678889999887 5999999999999999999999999999 99888754
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.29 E-value=3.4e-11 Score=80.61 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=64.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|.+..+|+.+|+|++.... .......+.+|+.+|.. .+||||+++++++..++.+|++||||++ +|.+++..
T Consensus 16 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~ 94 (364)
T cd05599 16 EVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMK 94 (364)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHH
Confidence 57888888999999999997531 22345667889999887 5999999999999999999999999999 99988764
No 31
>KOG0587|consensus
Probab=99.29 E-value=2.1e-11 Score=88.99 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=65.2
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhc-cHHH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-sL~~ 83 (89)
.||+.+.++.+|+..|+|+++...+. .+.+..|..+|+...+|||++.+||+|.. ++.+|+|||||.| |+.+
T Consensus 33 gkv~k~k~~~~~~~aa~kI~~~~~d~--deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTD 110 (953)
T KOG0587|consen 33 GKVYKGRHVKTGQLAAIKIMDPTEDE--EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTD 110 (953)
T ss_pred eeEEEEeeeecCceeeeEeecCCccc--cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHH
Confidence 57899999999999999999765433 44555688888887899999999999976 4799999999999 9999
Q ss_pred HHhhc
Q psy13291 84 FYTKV 88 (89)
Q Consensus 84 ~l~~~ 88 (89)
+++..
T Consensus 111 LVKn~ 115 (953)
T KOG0587|consen 111 LVKNT 115 (953)
T ss_pred HHhhh
Confidence 98764
No 32
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.28 E-value=4.2e-11 Score=80.63 Aligned_cols=76 Identities=9% Similarity=0.061 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|..+|+|.+.... .....+.+.+|+.+|.. ++||||+++++.+..++.+|++||||++ +|.+++.+
T Consensus 16 ~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~ 94 (376)
T cd05598 16 EVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (376)
T ss_pred EEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHh-CCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence 47888888999999999996421 22335667889999888 5999999999999999999999999999 99998865
No 33
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.28 E-value=5.8e-11 Score=78.88 Aligned_cols=77 Identities=12% Similarity=0.056 Sum_probs=64.6
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|++.... .......+..|..++....+||||+++++++...+.+|++||||++ +|.+++.+
T Consensus 10 ~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~ 89 (329)
T cd05588 10 KVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQR 89 (329)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHH
Confidence 57888888999999999998532 2234566788999988866899999999999999999999999999 99887754
No 34
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.28 E-value=4.6e-11 Score=79.34 Aligned_cols=76 Identities=11% Similarity=0.059 Sum_probs=64.4
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|.+.... .....+.+.+|+.+|.. ++||||+++++++..++.+|++|||+++ +|.+++..
T Consensus 33 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 111 (329)
T PTZ00263 33 RVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILME-LSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRK 111 (329)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHH
Confidence 57888888999999999997531 22345678899999888 5999999999999999999999999999 99888764
No 35
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.27 E-value=6.2e-11 Score=80.03 Aligned_cols=76 Identities=9% Similarity=0.068 Sum_probs=64.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....++..+|+|.+.... .....+.+..|+.++.. .+||||+++++++...+.+|++||||++ +|.+++.+
T Consensus 16 ~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~-~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (382)
T cd05625 16 EVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 94 (382)
T ss_pred EEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHh-CCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 47888888999999999997531 22345678899999888 5999999999999999999999999999 99988764
No 36
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.27 E-value=6.2e-11 Score=78.61 Aligned_cols=76 Identities=14% Similarity=0.164 Sum_probs=64.4
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|++.... .......+..|+.++.. .+||||+++++++...+.+|++|||++| +|.+++..
T Consensus 16 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (333)
T cd05600 16 QVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNN 94 (333)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHh-CCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHH
Confidence 47788888899999999997532 22345678889999887 4899999999999999999999999999 99999864
No 37
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.27 E-value=5.9e-11 Score=75.46 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=65.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+...........+.+|+.++.. ++||||+++++.+...+..|++|||+++ +|.+++..
T Consensus 10 ~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 86 (252)
T cd05084 10 EVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQ-YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT 86 (252)
T ss_pred cEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHh
Confidence 4778888889999999988755555556778999999887 5999999999999999999999999999 99998854
No 38
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.27 E-value=4.6e-11 Score=81.77 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=57.2
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+..+|+|.+.........+.+.+|+.+|..+..||||+++++++...+.+||+||||++ +|.+++.+
T Consensus 67 ~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 134 (400)
T cd05105 67 VMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHK 134 (400)
T ss_pred ceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHH
Confidence 34699999976555555678999999998864599999999999999999999999999 99998865
No 39
>KOG0605|consensus
Probab=99.27 E-value=2.9e-11 Score=84.45 Aligned_cols=76 Identities=11% Similarity=0.126 Sum_probs=67.2
Q ss_pred ceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 12 PELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
|+||.-+.||.++|+|++... ....+...+..|-.+|.. ..+|.||++|-+|++.+++|++|||++| ++..+|.+-
T Consensus 157 VrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~-~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~ 235 (550)
T KOG0605|consen 157 VRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAE-VDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRK 235 (550)
T ss_pred EEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhh-cCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhc
Confidence 789999999999999999864 233457788999999988 6999999999999999999999999999 999988653
No 40
>KOG1094|consensus
Probab=99.26 E-value=1.3e-11 Score=87.56 Aligned_cols=67 Identities=15% Similarity=0.256 Sum_probs=61.5
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
+..||+|.+..........+|..|+.+|.++ .||||++++|+|..++.+++++|||++ +|.+++.++
T Consensus 562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ah 629 (807)
T KOG1094|consen 562 PLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAH 629 (807)
T ss_pred ceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhc
Confidence 5889999998776666788999999999995 999999999999999999999999999 999999775
No 41
>KOG0616|consensus
Probab=99.26 E-value=2.5e-11 Score=80.26 Aligned_cols=77 Identities=12% Similarity=0.140 Sum_probs=68.3
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+|-|+.++.+|..+|+|+++.. ......+...+|..+|... .||+++.+++++.+.+.+|++|||.+| .|-+++++
T Consensus 59 rV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk 137 (355)
T KOG0616|consen 59 RVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRK 137 (355)
T ss_pred eEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHh
Confidence 6889999999999999999864 2334567788999999885 899999999999999999999999999 99999987
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 138 ~ 138 (355)
T KOG0616|consen 138 S 138 (355)
T ss_pred c
Confidence 5
No 42
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.26 E-value=7.5e-11 Score=79.23 Aligned_cols=76 Identities=11% Similarity=0.104 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|.+..+|+.+|+|++.... .......+..|+.++.. .+||||+++++++...+.+|++||||+| +|.+++.+
T Consensus 16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (363)
T cd05628 16 EVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMK 94 (363)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence 47888889999999999997531 22335667889999887 5999999999999999999999999999 99988864
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.26 E-value=9.1e-11 Score=77.69 Aligned_cols=76 Identities=12% Similarity=-0.005 Sum_probs=64.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|..+|+|++.... .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus 10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 88 (323)
T cd05571 10 KVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN-TRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 88 (323)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 57888999999999999997532 23345677889999887 5999999999999999999999999999 99887754
No 44
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.26 E-value=9.7e-11 Score=75.50 Aligned_cols=77 Identities=62% Similarity=0.876 Sum_probs=62.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+...........+..|+.++.+..+|||++++++++..++.+|++|||++++|.++++.
T Consensus 16 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~ 92 (283)
T cd06617 16 VVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYKK 92 (283)
T ss_pred EEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcccHHHHHHH
Confidence 46788888899999999998654333345667787776666799999999999999999999999999888777753
No 45
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.25 E-value=1.2e-10 Score=77.51 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=64.8
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+++.+|+|.+... ........+..|+.++....+||||+++++++...+.+|++|||+++ +|..++..
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~ 89 (329)
T cd05618 10 KVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQR 89 (329)
T ss_pred EEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHH
Confidence 5788888999999999999753 22334566788998888766999999999999999999999999999 99877654
No 46
>KOG0597|consensus
Probab=99.25 E-value=1e-11 Score=87.90 Aligned_cols=78 Identities=14% Similarity=0.088 Sum_probs=68.9
Q ss_pred cccceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 9 KKKPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 9 ~~~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
+..||.+..+.+.+.||+|.++... ...+...+.+|++|+.. +.||||+.+++.|....++|+|+|||.|+|..+|..
T Consensus 15 fg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~-lkHpniv~m~esfEt~~~~~vVte~a~g~L~~il~~ 93 (808)
T KOG0597|consen 15 FGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRS-LKHPNIVEMLESFETSAHLWVVTEYAVGDLFTILEQ 93 (808)
T ss_pred cceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHh-cCCcchhhHHHhhcccceEEEEehhhhhhHHHHHHh
Confidence 5678999999999999999998754 34467889999999877 599999999999999999999999999988888764
No 47
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.25 E-value=7.3e-11 Score=76.83 Aligned_cols=76 Identities=12% Similarity=0.135 Sum_probs=62.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++..
T Consensus 20 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~ 95 (288)
T cd07871 20 TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKN-LKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDN 95 (288)
T ss_pred EEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHh-CCCCCEeeEEEEEcCCCeEEEEEeCCCcCHHHHHHh
Confidence 4788888889999999999754333334567789999887 599999999999999999999999999977776643
No 48
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.25 E-value=9.3e-11 Score=77.51 Aligned_cols=77 Identities=10% Similarity=0.024 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|++.... .....+.+..|..++....+||||+++++++..++.+|++|||+++ +|..++..
T Consensus 10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 89 (321)
T cd05591 10 KVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQR 89 (321)
T ss_pred EEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHH
Confidence 57888888899999999997531 2234566778999987766999999999999999999999999999 99887754
No 49
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.25 E-value=1e-10 Score=77.02 Aligned_cols=76 Identities=12% Similarity=0.089 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... ........+..|+.+|.. .+||||+++++++..++..|++|||+++ +|.+++..
T Consensus 8 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 86 (312)
T cd05585 8 KVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQ-VNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR 86 (312)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence 4788888889999999999753 123345677889999888 5999999999999999999999999999 99888754
No 50
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.24 E-value=1.6e-10 Score=74.82 Aligned_cols=76 Identities=26% Similarity=0.398 Sum_probs=65.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+...........+.+|++++.. .+||||+++++++..++.+++++||+++ +|++++.+
T Consensus 20 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 96 (284)
T cd06620 20 SVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHE-CRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKK 96 (284)
T ss_pred EEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHH-cCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHh
Confidence 4677888888999999998765444456778899999887 5999999999999999999999999999 99988765
No 51
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.24 E-value=7.7e-11 Score=78.02 Aligned_cols=77 Identities=14% Similarity=0.086 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+++.+|+|.+.... .....+.+..|..++....+||||+++++++...+.+|++|||+++ +|.+++.+
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~ 89 (320)
T cd05590 10 KVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQK 89 (320)
T ss_pred EEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHH
Confidence 47888888999999999997531 2234566778888887766899999999999999999999999999 99888764
No 52
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.24 E-value=1.1e-10 Score=77.46 Aligned_cols=76 Identities=12% Similarity=-0.014 Sum_probs=63.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+.... .......+..|+.++.. .+||||+++++++...+.+|++|||+++ +|..++..
T Consensus 10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 88 (323)
T cd05595 10 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR 88 (323)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHH
Confidence 47888888999999999997532 22345667789999887 5999999999999999999999999999 99887754
No 53
>KOG0198|consensus
Probab=99.24 E-value=5.9e-11 Score=79.23 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=65.3
Q ss_pred cccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHH
Q psy13291 9 KKKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 9 ~~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l 85 (89)
.-.|+++.+..+|+.+|+|.+...... ..+.+.+|+.+|..+ .|||||+++|.....+ .++|+|||+++ ||.+++
T Consensus 30 ~G~V~l~~~~~~g~~~AvK~v~~~~~~-~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~ 107 (313)
T KOG0198|consen 30 FGSVYLATNKKTGELMAVKSVELEDSP-TSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLI 107 (313)
T ss_pred ceEEEEEEecCCCcceeeeeeecccch-hHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHH
Confidence 346889999899999999999876333 377799999999996 6999999999855443 79999999999 999998
Q ss_pred hhc
Q psy13291 86 TKV 88 (89)
Q Consensus 86 ~~~ 88 (89)
++.
T Consensus 108 ~~~ 110 (313)
T KOG0198|consen 108 KRY 110 (313)
T ss_pred HHc
Confidence 764
No 54
>KOG0591|consensus
Probab=99.24 E-value=1.2e-12 Score=86.14 Aligned_cols=76 Identities=16% Similarity=0.283 Sum_probs=65.9
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEe-EEEECCE-EEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYG-AMFREGD-VWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~-~~~~~~~-~~iv~E~~~~-sL~~~l~ 86 (89)
.|+.+.+.++|..+|.|.|.-. .+....+++..|+.+|.+ ++|||||++|+ .|..++. ++|+||||++ +|.++|+
T Consensus 34 ~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQ-L~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk 112 (375)
T KOG0591|consen 34 EVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQ-LNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIK 112 (375)
T ss_pred heEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHh-cCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHH
Confidence 3677888999999999999743 456678899999999999 59999999998 7777665 9999999999 9999997
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 113 ~ 113 (375)
T KOG0591|consen 113 H 113 (375)
T ss_pred H
Confidence 5
No 55
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.24 E-value=8.3e-11 Score=80.59 Aligned_cols=69 Identities=17% Similarity=0.222 Sum_probs=57.9
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
++..+|+|.+.........+.+..|+.+|..+..||||+++++++..++.++++||||++ +|.+++.+.
T Consensus 66 ~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~ 135 (401)
T cd05107 66 STMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRN 135 (401)
T ss_pred CceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHHhc
Confidence 456799999976544444567889999998864599999999999999999999999999 999998753
No 56
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.24 E-value=2.4e-10 Score=73.78 Aligned_cols=76 Identities=14% Similarity=0.252 Sum_probs=65.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+...........+.+|+.++.. .+||||+++++++...+..|++|||+++ +|.++++.
T Consensus 19 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 95 (277)
T cd06640 19 EVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA 95 (277)
T ss_pred EEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc
Confidence 4677777888999999999865444556788899999887 5999999999999999999999999999 99988764
No 57
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.23 E-value=5.7e-11 Score=76.87 Aligned_cols=76 Identities=33% Similarity=0.517 Sum_probs=65.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+....++.....+.+|+.++.. ..||||+++++++..++..|++|||+++ +|++++..
T Consensus 16 ~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 92 (286)
T cd06622 16 SVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHK-AVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAG 92 (286)
T ss_pred EEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHh-cCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHh
Confidence 4677888889999999999765555556788899999888 5999999999999999999999999999 99998865
No 58
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.23 E-value=1.3e-10 Score=76.96 Aligned_cols=77 Identities=9% Similarity=0.025 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+.... .....+....|..++....+||||+++++++...+.+|++|||+++ +|.++++.
T Consensus 10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 89 (316)
T cd05619 10 KVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQS 89 (316)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence 57889888999999999997532 1223456677888887766999999999999999999999999999 99988864
No 59
>KOG1989|consensus
Probab=99.23 E-value=7.1e-11 Score=85.60 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=62.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeE-EEEC------CEEEEEecchhc-cHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGA-MFRE------GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~-~~~~------~~~~iv~E~~~~-sL~~ 83 (89)
||+|.....|..+|+|++-.. +....+.+.+|+.+|..+.+|+|||.|+++ .... -+++|+||||.| +|-+
T Consensus 53 VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd 131 (738)
T KOG1989|consen 53 VYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVD 131 (738)
T ss_pred EEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHH
Confidence 688888888899999999865 667788999999999998899999999993 3221 279999999998 8888
Q ss_pred HHh
Q psy13291 84 FYT 86 (89)
Q Consensus 84 ~l~ 86 (89)
++.
T Consensus 132 ~mn 134 (738)
T KOG1989|consen 132 FMN 134 (738)
T ss_pred HHH
Confidence 775
No 60
>KOG0659|consensus
Probab=99.22 E-value=2.5e-11 Score=79.25 Aligned_cols=77 Identities=8% Similarity=0.070 Sum_probs=65.9
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
-|++|....||+.||||.|... ..+....+.++|+..|+. ++||||+.+.++|-+.+.+.||+|||+.+|+.+|+..
T Consensus 17 vVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqe-l~h~nIi~LiD~F~~~~~l~lVfEfm~tdLe~vIkd~ 94 (318)
T KOG0659|consen 17 VVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQE-LKHPNIIELIDVFPHKSNLSLVFEFMPTDLEVVIKDK 94 (318)
T ss_pred EEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHH-ccCcchhhhhhhccCCCceEEEEEeccccHHHHhccc
Confidence 4788999999999999999753 233335578899999988 5999999999999999999999999999999988753
No 61
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.22 E-value=6.7e-11 Score=80.02 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=58.4
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++..+|+|++.........+.+.+|+.+|..+.+||||+++++++...+..+++||||++ +|.++++.
T Consensus 63 ~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~ 132 (375)
T cd05104 63 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRR 132 (375)
T ss_pred ccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHh
Confidence 4567899999975444445677889999998855899999999999999999999999999 99998864
No 62
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.22 E-value=3e-10 Score=73.39 Aligned_cols=76 Identities=14% Similarity=0.265 Sum_probs=63.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..|++|||+++ +|.+++..
T Consensus 19 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~ 95 (277)
T cd06641 19 EVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP 95 (277)
T ss_pred EEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHh-cCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc
Confidence 3667777788999999998754444456678889999887 5999999999999999999999999999 99988764
No 63
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.22 E-value=1.5e-10 Score=76.47 Aligned_cols=77 Identities=8% Similarity=0.037 Sum_probs=63.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....++..+|+|.+.... .....+....|..++....+||||+++++++...+.+|++|||++| +|.++++.
T Consensus 10 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~ 89 (316)
T cd05592 10 KVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQS 89 (316)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHH
Confidence 57888888999999999997532 2233455667777777666999999999999999999999999999 99888754
No 64
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.22 E-value=1.6e-10 Score=78.12 Aligned_cols=76 Identities=13% Similarity=0.112 Sum_probs=63.3
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|..+|+|.+... ......+.+..|+.++.. .+||||+++++++..++.+|++||||+| +|.+++..
T Consensus 58 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~-~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05596 58 EVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh
Confidence 5788888899999999999752 122234557789999877 5999999999999999999999999999 99998865
No 65
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.22 E-value=1.5e-10 Score=76.52 Aligned_cols=77 Identities=9% Similarity=0.042 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... ........+..|..++....+||||+++++++...+.+|++|||++| +|...+..
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 89 (318)
T cd05570 10 KVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQR 89 (318)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH
Confidence 5788888899999999999753 12234566778989987766899999999999999999999999999 99887754
No 66
>KOG0607|consensus
Probab=99.22 E-value=3.4e-12 Score=85.44 Aligned_cols=71 Identities=8% Similarity=0.059 Sum_probs=60.5
Q ss_pred EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
|.+..||..||||+|+..... ...++++|++++.+..+|+||+++.+.|.+++..|+|||=|.| +|-.-|+
T Consensus 97 cv~i~t~~EYAVKiidKq~gH-sR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~ 168 (463)
T KOG0607|consen 97 CVSIQTGKEYAVKIIDKQPGH-SRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQ 168 (463)
T ss_pred eeeeccchhhhhhhhhcCCch-HHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHH
Confidence 445578999999999877443 4778999999999989999999999999999999999999999 6655444
No 67
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.21 E-value=2.2e-10 Score=77.53 Aligned_cols=76 Identities=13% Similarity=0.140 Sum_probs=63.0
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..++..+|+|.+... ......+.+..|+.++.. .+||||+++++++..++.+|++||||++ +|.+++..
T Consensus 58 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~ 136 (370)
T cd05621 58 EVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN 136 (370)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh
Confidence 4778888899999999999742 122234557788888776 6999999999999999999999999999 99998864
No 68
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.21 E-value=1.9e-10 Score=76.40 Aligned_cols=76 Identities=12% Similarity=0.010 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|++.... .......+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|...+..
T Consensus 10 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 88 (328)
T cd05593 10 KVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSR 88 (328)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHh
Confidence 57888899999999999997532 23345678889999877 5999999999999999999999999999 99877754
No 69
>KOG0589|consensus
Probab=99.21 E-value=4.8e-11 Score=82.16 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=64.5
Q ss_pred ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-EEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-VWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-~~iv~E~~~~-sL~~~l~~ 87 (89)
+.++.++..+..+++|.|.... .....+...+|+.++++ +.|||||.+.+.|...+. ++|+|+||+| ++.+.|.+
T Consensus 20 a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~-~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~ 97 (426)
T KOG0589|consen 20 ALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSK-LLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKE 97 (426)
T ss_pred hhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHh-ccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHH
Confidence 4567788888899999998753 44456678899999998 699999999999999887 9999999999 99999865
No 70
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.21 E-value=1.2e-10 Score=78.87 Aligned_cols=76 Identities=20% Similarity=0.128 Sum_probs=61.4
Q ss_pred ceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 12 PELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
|+.+.... ++..||+|.+.........+.+.+|+.++..+.+||||+++++++...+.++++||||++ +|.+++
T Consensus 54 V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l 133 (374)
T cd05106 54 VVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133 (374)
T ss_pred EEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHH
Confidence 45555433 335799999976554555677889999988755899999999999999999999999999 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
+.
T Consensus 134 ~~ 135 (374)
T cd05106 134 RK 135 (374)
T ss_pred Hh
Confidence 64
No 71
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.21 E-value=2.1e-10 Score=76.96 Aligned_cols=76 Identities=12% Similarity=0.146 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+... ........+..|..++.. .+||||+++++++...+.+|++||||+| +|.+++.+
T Consensus 16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~ 94 (360)
T cd05627 16 EVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE-ADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMK 94 (360)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHh
Confidence 4788888899999999999753 122345678889999887 5999999999999999999999999999 99998864
No 72
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.20 E-value=2.9e-10 Score=75.46 Aligned_cols=77 Identities=9% Similarity=0.062 Sum_probs=65.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|++.... .....+.+..|..++....+||||+.+++++...+.+|++|||+++ +|..++..
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 89 (327)
T cd05617 10 KVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQR 89 (327)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHH
Confidence 57888888999999999998542 2334567888999988876899999999999999999999999999 99887754
No 73
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.20 E-value=1.8e-10 Score=75.43 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=60.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|....+|..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++.
T Consensus 20 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 94 (303)
T cd07869 20 TVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMD 94 (303)
T ss_pred EEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhh-CCCCCcCeEEEEEecCCeEEEEEECCCcCHHHHHH
Confidence 5778888889999999999754333334456789999887 59999999999999999999999999886555554
No 74
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.20 E-value=6.5e-11 Score=77.25 Aligned_cols=76 Identities=7% Similarity=0.085 Sum_probs=63.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|.+.... .....+.+.+|+.++.. +.||||+++++++...+.+|++|||+++ +|.++++.
T Consensus 16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 94 (291)
T cd05612 16 RVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKE-VSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRN 94 (291)
T ss_pred EEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHh-CCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHH
Confidence 57888888899999999997532 22345668889999887 5999999999999999999999999999 99988764
No 75
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.20 E-value=8e-11 Score=78.09 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=56.7
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++..||+|.+...........+..|+.+|..+.+||||+++++++... +.++++|||+++ +|.++++.
T Consensus 35 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 105 (338)
T cd05102 35 SSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRA 105 (338)
T ss_pred ccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHh
Confidence 3557899999975444445677899999998865999999999988764 468999999999 99999875
No 76
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.20 E-value=2.7e-10 Score=75.46 Aligned_cols=76 Identities=13% Similarity=-0.009 Sum_probs=63.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|..+|+|.+.... .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|..++..
T Consensus 10 ~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~-~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~ 88 (325)
T cd05594 10 KVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 88 (325)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence 57888888999999999997532 22345667789999877 5999999999999999999999999999 99887754
No 77
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.20 E-value=1.5e-10 Score=77.46 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=62.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
.|+++....+|..||+|.+...........+.+|+.++.. ++||||+++++.+...+.++++|||+++ +|..
T Consensus 89 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~ 161 (353)
T PLN00034 89 TVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRD-VNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEG 161 (353)
T ss_pred EEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHh-CCCCCcceeeeEeccCCeEEEEEecCCCCcccc
Confidence 5778888889999999999765555556778999999887 5999999999999999999999999999 8754
No 78
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.20 E-value=2.5e-10 Score=75.55 Aligned_cols=77 Identities=9% Similarity=0.116 Sum_probs=61.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|+.+|+|++.... .......+..|...+.+..+||||+++++.+...+.+|++|||+++ +|..++..
T Consensus 10 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 89 (323)
T cd05575 10 KVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQR 89 (323)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHh
Confidence 57888999999999999997531 2233455667766555546999999999999999999999999999 99887754
No 79
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.20 E-value=2.1e-10 Score=73.77 Aligned_cols=68 Identities=18% Similarity=0.203 Sum_probs=58.1
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+..+|+|.+....+......+..|+..+.. ..||||+++++.+...+.++++|||+++ +|++++..
T Consensus 31 ~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 99 (266)
T cd05064 31 KRELPVAIHTLRAGCSDKQRRGFLAEALTLGQ-FDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRK 99 (266)
T ss_pred CceeeEEEEecCCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHh
Confidence 35678999999865555556778899999887 5999999999999999999999999999 99998865
No 80
>KOG1095|consensus
Probab=99.19 E-value=1.1e-10 Score=87.01 Aligned_cols=65 Identities=18% Similarity=0.197 Sum_probs=59.6
Q ss_pred EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.||+|.+....+..+..+|+.|..+|.. ++||||+++.|.+......+|++|||.| +|..+|+..
T Consensus 724 ~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~-f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~ 789 (1025)
T KOG1095|consen 724 QVAVKSLKRLSSEQEVSDFLKEALLMSK-FDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRES 789 (1025)
T ss_pred EEEEEeccccCCHHHHHHHHHHHHHHhc-CCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhc
Confidence 4999999887777888999999999877 6999999999999999999999999999 999999875
No 81
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.19 E-value=4.6e-10 Score=72.65 Aligned_cols=74 Identities=27% Similarity=0.422 Sum_probs=63.2
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
-.|+++.+..++..+|+|.+.........+.+.+|+.++.. ++||||+++++.+...+..+++|||+++ +|+.+
T Consensus 15 ~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~ 89 (279)
T cd06619 15 GTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYK-CDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY 89 (279)
T ss_pred eEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHh-CCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh
Confidence 35788888899999999999765444456678899999887 5999999999999999999999999999 88654
No 82
>KOG0197|consensus
Probab=99.19 E-value=1.2e-10 Score=80.87 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=56.2
Q ss_pred ccCCC-EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 18 RLDPD-SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 18 ~~~~~-~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
...|. .+|+|.+.... ...+.+.+|+++|++ ++|+|||+++|++..++.++||||||+. +|.++|+.
T Consensus 226 ~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~-L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~ 294 (468)
T KOG0197|consen 226 KWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKK-LRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRT 294 (468)
T ss_pred EEcCCCcccceEEeccc--cChhHHHHHHHHHHh-CcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhh
Confidence 34554 78999997532 224677899999888 5999999999999999999999999999 99999986
No 83
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.19 E-value=2.3e-10 Score=74.81 Aligned_cols=67 Identities=16% Similarity=0.251 Sum_probs=57.1
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+..........++.+|+.+|.. +.||||+++++++...+..+++|||+++ +|.+++..
T Consensus 45 ~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (304)
T cd05096 45 RPLLVAVKILRPDANKNARNDFLKEVKILSR-LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSS 112 (304)
T ss_pred cceEEEEEEecCCCCHHHHHHHHHHHHHHhh-cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 4457999999765555556788999999887 5999999999999999999999999999 99988754
No 84
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.19 E-value=5.6e-10 Score=72.01 Aligned_cols=75 Identities=21% Similarity=0.295 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... .....+.+..|+.++..+ +|||++++++.+..++..|++|||+++ +|++++..
T Consensus 20 ~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (280)
T cd06611 20 KVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLE 95 (280)
T ss_pred eEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHH
Confidence 4677777788999999999754 334467788999998884 899999999999999999999999999 99998864
No 85
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.19 E-value=2.6e-10 Score=72.79 Aligned_cols=76 Identities=34% Similarity=0.496 Sum_probs=66.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+++.+|+|.+...........+.+|+.++..+ .||||+++++.+...+.+++++||+++ +|.+++..
T Consensus 16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 92 (265)
T cd06605 16 VVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKE 92 (265)
T ss_pred EEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHH
Confidence 46788888899999999998765555567789999998884 799999999999999999999999998 99999875
No 86
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.19 E-value=4.3e-10 Score=72.38 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=64.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+...........+.+|+.++..+. .|||++++++++...+.+|++|||+++ +|.++++.
T Consensus 16 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (277)
T cd06917 16 AVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA 95 (277)
T ss_pred eEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc
Confidence 467777788999999999976544455677888999988753 499999999999999999999999999 99998764
No 87
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.18 E-value=2.1e-10 Score=75.18 Aligned_cols=76 Identities=8% Similarity=0.135 Sum_probs=65.5
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
-+.++.+..+|..+|+|.+... ........+..|+.++.. ++||||+++++++...+.++++|||+++ +|++++..
T Consensus 15 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~ 92 (314)
T cd08216 15 IVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQ-LQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT 92 (314)
T ss_pred eEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHh-cCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH
Confidence 3677888889999999999764 344556789999999887 5899999999999999999999999999 99998864
No 88
>PHA02988 hypothetical protein; Provisional
Probab=99.18 E-value=3.3e-10 Score=73.86 Aligned_cols=70 Identities=10% Similarity=0.048 Sum_probs=56.7
Q ss_pred EccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHHHhh
Q psy13291 17 ARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 17 ~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
...+|..+|+|.+.... .....+.+.+|+.+|.+ +.||||++++|++.. ...++++|||+++ +|.+++..
T Consensus 39 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 115 (283)
T PHA02988 39 GIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRR-IDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK 115 (283)
T ss_pred EEECCEEEEEEeccccccccHHHHHHHHHHHHHHHh-cCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh
Confidence 34588999999997542 22235678899999988 599999999999877 3579999999999 99999865
No 89
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.18 E-value=2.4e-10 Score=75.56 Aligned_cols=77 Identities=9% Similarity=0.041 Sum_probs=63.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+.... .....+....|..++....+||||+++++++...+.+|++|||+++ +|..++..
T Consensus 10 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~ 89 (316)
T cd05620 10 KVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQD 89 (316)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHH
Confidence 57889999999999999997532 1223556677888887666999999999999999999999999999 99887754
No 90
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.18 E-value=1.3e-10 Score=75.01 Aligned_cols=76 Identities=14% Similarity=0.261 Sum_probs=64.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+.+....++..+|+|.+.........+.+.+|+.++.. .+||||+++++.+..++..|+++||+++ +|.+++..
T Consensus 19 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (277)
T cd06642 19 EVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP 95 (277)
T ss_pred eEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHc-CCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc
Confidence 4677888888999999998755444456778899999887 5999999999999999999999999999 99888754
No 91
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.18 E-value=3.9e-10 Score=74.67 Aligned_cols=76 Identities=8% Similarity=0.002 Sum_probs=64.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..+|+.||+|.+.... .....+.+.+|+.++.. ++||||++++++|..++..|+++||+.+ ++.+++++
T Consensus 15 ~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~-l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~ 92 (328)
T cd08226 15 SVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHF-FRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKT 92 (328)
T ss_pred eEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHh
Confidence 47788888899999999997543 34445778888888765 5999999999999999999999999999 99998865
No 92
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.18 E-value=3.2e-10 Score=73.57 Aligned_cols=75 Identities=11% Similarity=0.033 Sum_probs=62.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+|+.+|+|.+..... ....+.+..|+.++.. ++||||+.+.+++...+.++++|||+++ +|.+++.
T Consensus 8 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~ 85 (280)
T cd05608 8 EVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAK-VHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIY 85 (280)
T ss_pred eEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHh-CCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHH
Confidence 578889999999999999975321 1234567789999887 5999999999999999999999999999 9987763
No 93
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.18 E-value=3.4e-10 Score=73.97 Aligned_cols=76 Identities=12% Similarity=0.145 Sum_probs=62.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....++..+|+|.+...........+..|+.++.. ++||||+++++++..++.++++|||++++|.+++..
T Consensus 21 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~nI~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~ 96 (301)
T cd07873 21 TVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD 96 (301)
T ss_pred EEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHh-cCCCCcceEEEEEecCCeEEEEEeccccCHHHHHHh
Confidence 4678888889999999999754333334557789999887 599999999999999999999999998877766643
No 94
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.17 E-value=3.3e-10 Score=75.30 Aligned_cols=76 Identities=11% Similarity=0.046 Sum_probs=63.4
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... ......+.+..|..++.. .+||||+.+++++..++.+|++|||++| +|.+++.+
T Consensus 16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (331)
T cd05597 16 EVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSK 94 (331)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHH
Confidence 4678888899999999999742 222345567788888776 5999999999999999999999999999 99998864
No 95
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.17 E-value=4.1e-10 Score=76.15 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=62.8
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..++..+|+|.+... ......+.+..|..++.. .+||||+++++++..++.+|++||||+| +|.++++.
T Consensus 58 ~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~-~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~ 136 (371)
T cd05622 58 EVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF-ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN 136 (371)
T ss_pred EEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHh-CCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh
Confidence 5788888999999999999742 122234556788888766 6999999999999999999999999999 99998864
No 96
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.17 E-value=4.5e-10 Score=74.35 Aligned_cols=77 Identities=12% Similarity=0.177 Sum_probs=61.4
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|++.... .......+..|...+.+..+||||+++++++...+..|++|||+++ +|..++.+
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 89 (325)
T cd05604 10 KVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQR 89 (325)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHH
Confidence 57888888999999999997531 2233455666766555556999999999999999999999999999 98877654
No 97
>KOG1187|consensus
Probab=99.17 E-value=2.2e-10 Score=77.83 Aligned_cols=66 Identities=18% Similarity=0.256 Sum_probs=54.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|..+|||.+....... ..+|..|+.+|.++ +|||+++++|+|...+ ...+|.|||++ ||++.|..
T Consensus 98 ~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~ 165 (361)
T KOG1187|consen 98 DGTVVAVKRLSSNSGQG-EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHG 165 (361)
T ss_pred CCCEEEEEEecCCCCcc-hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCC
Confidence 44889999887544332 44599999999985 8999999999999988 59999999999 99988753
No 98
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.17 E-value=3.8e-10 Score=74.74 Aligned_cols=77 Identities=13% Similarity=0.059 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+.... .....+.+..|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++++
T Consensus 16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (330)
T cd05601 16 EVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI-SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNR 94 (330)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHH
Confidence 57888888999999999997532 22345567788888776 5999999999999999999999999999 99999875
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 95 ~ 95 (330)
T cd05601 95 Y 95 (330)
T ss_pred h
Confidence 3
No 99
>KOG0598|consensus
Probab=99.16 E-value=1.1e-10 Score=78.37 Aligned_cols=76 Identities=9% Similarity=0.031 Sum_probs=66.5
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
||.++..+.+++.+|+|++... ....+.+....|..||.. .+||+|+.++-+|++.+.+|+|+||+.| .|-..|++
T Consensus 40 kV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~-v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~ 118 (357)
T KOG0598|consen 40 KVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSK-IKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQR 118 (357)
T ss_pred eEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHh-CCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHh
Confidence 6889999999999999999864 233457788999999988 6999999999999999999999999999 88777764
No 100
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.16 E-value=6.3e-10 Score=72.25 Aligned_cols=75 Identities=25% Similarity=0.276 Sum_probs=62.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~ 86 (89)
.++++....+++.+|+|.+...........+.+|++++.. ++||||+.+++++... +.++++|||+++ +|.+++.
T Consensus 16 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 93 (287)
T cd06621 16 SVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS-CKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYK 93 (287)
T ss_pred EEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh-CCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHH
Confidence 4678888889999999999865444456778999999887 5999999999998654 479999999999 9988765
No 101
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.16 E-value=9.4e-10 Score=70.04 Aligned_cols=76 Identities=13% Similarity=0.079 Sum_probs=64.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++.+..++..+|+|.+.........+.+..|+.++.. .+|||++++++++...+.+|++|||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 91 (255)
T cd08219 15 RALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAK-MKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL 91 (255)
T ss_pred EEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHh-CCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHh
Confidence 3677888889999999999755444456778889999877 5999999999999999999999999999 98887753
No 102
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.16 E-value=5.3e-10 Score=71.77 Aligned_cols=76 Identities=20% Similarity=0.229 Sum_probs=61.3
Q ss_pred cceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....++ ..+|+|.+...........+..|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++.
T Consensus 19 ~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 97 (267)
T cd05066 19 EVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQ-FDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLR 97 (267)
T ss_pred ceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHH
Confidence 35666655444 36999998765445556788899999887 5999999999999999999999999999 9999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 98 ~ 98 (267)
T cd05066 98 K 98 (267)
T ss_pred h
Confidence 5
No 103
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.16 E-value=6.5e-10 Score=77.50 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=59.7
Q ss_pred cceeEEEccC-CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLD-PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~-~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|++|....+ +..+|+|.+... .......+..|+.+|.. ++||||+++++.+..++.+||+|||++| +|.+++.
T Consensus 82 ~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~-l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~ 157 (478)
T PTZ00267 82 AAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAA-CDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIK 157 (478)
T ss_pred EEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHh-CCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHH
Confidence 3566766666 778899877533 23345567789999887 5999999999999999999999999999 9988775
No 104
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.16 E-value=3.7e-10 Score=72.82 Aligned_cols=75 Identities=13% Similarity=0.187 Sum_probs=62.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....+|..+|+|.+...........+..|+.++.. ++|||++++++++...+..+++|||++++|.+++.
T Consensus 15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 89 (284)
T cd07836 15 TVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKE-LKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMD 89 (284)
T ss_pred EEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHh-hcCCCEeeeeeeEeeCCcEEEEEecCCccHHHHHH
Confidence 5778888889999999999765433335567789999887 49999999999999999999999999997666654
No 105
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.16 E-value=4.3e-10 Score=74.26 Aligned_cols=77 Identities=8% Similarity=0.094 Sum_probs=60.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|..+|+|.+.... .......+..|...+.+..+||||+++++.+...+.+|++|||+++ +|...+..
T Consensus 10 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 89 (321)
T cd05603 10 KVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQR 89 (321)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHH
Confidence 47889999999999999997532 2223455666766544446999999999999999999999999999 98877653
No 106
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.16 E-value=4.5e-10 Score=75.20 Aligned_cols=76 Identities=12% Similarity=0.172 Sum_probs=60.9
Q ss_pred cceeEEEccCC-CEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDP-DSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~-~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|++|....++ ..+|+|.+.... .....+.+..|+.++.. ++||||+++++++..++.+|++|||+++ +|.+++.
T Consensus 45 ~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~ 123 (340)
T PTZ00426 45 RVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNY-INHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLR 123 (340)
T ss_pred EEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHh-CCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHH
Confidence 35666655554 689999997531 22345678899999887 5999999999999999999999999999 9998886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 124 ~ 124 (340)
T PTZ00426 124 R 124 (340)
T ss_pred H
Confidence 5
No 107
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.15 E-value=1.1e-09 Score=69.75 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=63.7
Q ss_pred ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+.++....++..+++|.+... .+......+.+|++++.+ .+||||+++++++...+.++++|||+++ +|.+++..
T Consensus 16 v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~ 92 (256)
T cd08221 16 ATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSL-LQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVR 92 (256)
T ss_pred EEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHh-CCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHh
Confidence 466777788999999998754 234456778899999888 5999999999999999999999999999 99998864
No 108
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.15 E-value=4.9e-10 Score=72.86 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+++.+|+|.+.... .......+.+|+.++.. ++||||+++++++..++.++++|||+++ +|.+++.
T Consensus 15 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 92 (285)
T cd05605 15 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY 92 (285)
T ss_pred EEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHh-cCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHH
Confidence 46778888899999999997532 12223456789999887 4999999999999999999999999999 9987764
No 109
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.14 E-value=6.4e-10 Score=72.04 Aligned_cols=75 Identities=11% Similarity=0.009 Sum_probs=60.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+|+.+|+|.+..... ......+..|++++.. ++||||+++++.+...+.+|++|||++| +|.+++.
T Consensus 8 ~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~ 85 (277)
T cd05607 8 EVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEK-VNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIY 85 (277)
T ss_pred EEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHh-cCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHH
Confidence 478888889999999999974211 1123345679999888 4999999999999999999999999999 9987764
No 110
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.14 E-value=5.7e-10 Score=73.63 Aligned_cols=75 Identities=13% Similarity=0.055 Sum_probs=59.5
Q ss_pred ceeEEE---ccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 12 PELGLA---RLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 12 ~~l~~~---~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
|+++.. ..+|..+|+|++.... .......+..|+.+|.+ ++||||+++++++..++.+|++|||+++ +|.+++.
T Consensus 12 Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 90 (318)
T cd05582 12 VFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAE-VNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLS 90 (318)
T ss_pred EEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHH
Confidence 445543 4588999999997532 22234567789999888 5999999999999999999999999999 9988875
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
+
T Consensus 91 ~ 91 (318)
T cd05582 91 K 91 (318)
T ss_pred H
Confidence 4
No 111
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.14 E-value=7.7e-10 Score=70.20 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=65.2
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+++|.+... ........+..|+.++.. .+|||++++++++...+..+++|||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 92 (256)
T cd08529 15 VVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAK-LDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKM 92 (256)
T ss_pred EEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHh-cCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHH
Confidence 4677888889999999999753 344456778899999887 5999999999999999999999999999 99998865
No 112
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.14 E-value=3e-10 Score=75.81 Aligned_cols=76 Identities=16% Similarity=0.188 Sum_probs=60.8
Q ss_pred ceeEEE-----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHH
Q psy13291 12 PELGLA-----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~-----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~ 84 (89)
|++|.. ..+++.+|+|.+...........+.+|+.+|..+.+||||+++++++... ..++++||||++ +|.++
T Consensus 23 V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~ 102 (343)
T cd05103 23 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNY 102 (343)
T ss_pred EEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHH
Confidence 555552 35678899999976544455677889999998866899999999988664 578999999999 99999
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 103 i~~ 105 (343)
T cd05103 103 LRS 105 (343)
T ss_pred HHh
Confidence 864
No 113
>KOG0580|consensus
Probab=99.14 E-value=2.5e-11 Score=78.21 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++..+.++.++|+|++.... ......++.+|++|=+. +.||||+++|++|.+...+|+++||++. ++...|+
T Consensus 37 ~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~-L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~ 114 (281)
T KOG0580|consen 37 NVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSH-LRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQ 114 (281)
T ss_pred cEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecc-cCCccHHhhhhheeccceeEEEEEecCCchHHHHHH
Confidence 68999999999999999997532 22335678899999544 6999999999999999999999999999 8877776
No 114
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.14 E-value=5.9e-10 Score=73.87 Aligned_cols=77 Identities=9% Similarity=0.017 Sum_probs=63.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|..||+|++.... .....+.+..|..++....+||+|+.+++++...+.+|++|||++| +|.+++..
T Consensus 15 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~ 94 (323)
T cd05615 15 KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQ 94 (323)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHH
Confidence 57889999999999999997531 2233556778888887765778888999999999999999999999 99888764
No 115
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.13 E-value=1.3e-09 Score=69.84 Aligned_cols=75 Identities=15% Similarity=0.269 Sum_probs=62.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+..... .....+.+|+.++.. ..||||+++++++..++.+|++|||+++ +|.+++..
T Consensus 24 ~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~~e~~~l~~-~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 99 (267)
T cd06646 24 DVYKARNLHTGELAAVKIIKLEPG-DDFSLIQQEIFMVKE-CKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHV 99 (267)
T ss_pred EEEEEEECCCCeEEEEEEEecCcc-chHHHHHHHHHHHHh-cCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 467788788999999999975422 224567789999887 5999999999999999999999999999 99988753
No 116
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.13 E-value=4.1e-10 Score=72.41 Aligned_cols=68 Identities=16% Similarity=0.277 Sum_probs=55.6
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.+..|+||.+......+..+.+..|+..+.++ +||||++++|.+...+.+++++|||++ +|+++|...
T Consensus 27 ~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~ 95 (259)
T PF07714_consen 27 KNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSK 95 (259)
T ss_dssp SEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHT
T ss_pred CCEEEEEEEeccccccccceeeeecccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence 45679999996555555678899999999885 999999999999988889999999998 999998764
No 117
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.13 E-value=1.5e-09 Score=69.46 Aligned_cols=75 Identities=16% Similarity=0.291 Sum_probs=62.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+..... .....+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 24 ~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~-l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 99 (267)
T cd06645 24 DVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKD-CKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHV 99 (267)
T ss_pred EEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHh-CCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHh
Confidence 467788888999999999875432 234567789988777 5999999999999999999999999999 99998754
No 118
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.13 E-value=1e-09 Score=71.92 Aligned_cols=76 Identities=9% Similarity=0.065 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++.+..+++.+|+|.+.... .....+.+..|+.++.. .+||||+++++++..++.++++|||++| +|.++++.
T Consensus 16 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 94 (305)
T cd05609 16 AVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTF-AENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKN 94 (305)
T ss_pred eEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHH
Confidence 46788889999999999987542 12345678889999877 5999999999999999999999999999 99998864
No 119
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.13 E-value=5.8e-10 Score=71.66 Aligned_cols=76 Identities=16% Similarity=0.174 Sum_probs=60.2
Q ss_pred cceeEEE--ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLA--RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~--~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.. ..++..+|+|.+...........+.+|+.++.. ++||||+++++++...+..+++|||+++ +|.+++..
T Consensus 10 ~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 88 (269)
T cd05087 10 KVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRS-LQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRS 88 (269)
T ss_pred eEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHH
Confidence 3555543 245667999998765444445578889999887 5999999999999998999999999999 99998864
No 120
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.13 E-value=1.3e-09 Score=70.20 Aligned_cols=76 Identities=12% Similarity=0.208 Sum_probs=64.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+...........+.+|+.++.. .+|||++++++++..+..+|+++||+++ +|.+++..
T Consensus 16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 92 (274)
T cd06609 16 EVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQ-CRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKP 92 (274)
T ss_pred EEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHH-cCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhh
Confidence 4677888889999999999765444455678889999887 4899999999999999999999999999 99988764
No 121
>KOG0593|consensus
Probab=99.13 E-value=4.1e-11 Score=79.67 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=62.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHH-HHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEH-KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~-~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|..|.++.||++||||.+....++... .-.++|+.+|.+ +.|||+|.+..+|.....+++|+|||+. -|+++
T Consensus 17 vV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKq-LkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eL 91 (396)
T KOG0593|consen 17 VVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQ-LKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHEL 91 (396)
T ss_pred EEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHh-cccchHHHHHHHHHhcceeEEEeeecchHHHHHH
Confidence 3678899999999999999866554434 556999999999 5999999999999999999999999999 55554
No 122
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.13 E-value=6.4e-10 Score=72.10 Aligned_cols=76 Identities=12% Similarity=0.117 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++...+..+++|||++++|.+++.+
T Consensus 20 ~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~ 95 (291)
T cd07844 20 TVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKD-LKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDD 95 (291)
T ss_pred EEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhh-CCCcceeeEEEEEecCCeEEEEEecCCCCHHHHHHh
Confidence 4677888888999999999754322223456789999887 599999999999999999999999999877776654
No 123
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.13 E-value=7.2e-10 Score=72.72 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=60.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|+++....++..+|+|.+...........+.+|+.++.. ++||||+++++++..++..+++|||++++|.+++.
T Consensus 21 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 95 (309)
T cd07872 21 TVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKD-LKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMD 95 (309)
T ss_pred EEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHh-CCCCCcceEEEEEeeCCeEEEEEeCCCCCHHHHHH
Confidence 4677888889999999999754333334456789999887 59999999999999999999999999986666554
No 124
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.12 E-value=1.2e-09 Score=69.47 Aligned_cols=75 Identities=15% Similarity=0.252 Sum_probs=63.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+..... ...+.+..|+.++.. ++|||++++++++...+.+|++|||+++ +|.+++..
T Consensus 18 ~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~ 93 (262)
T cd06613 18 DVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKE-CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93 (262)
T ss_pred EEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHh-CCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHh
Confidence 466777778889999999975432 246778899999887 5999999999999999999999999999 99998865
No 125
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.12 E-value=1e-09 Score=72.95 Aligned_cols=76 Identities=11% Similarity=0.072 Sum_probs=62.5
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+++.+|+|.+... ......+.+..|..++.. .+||||+.+++++..++..|++|||++| +|.+++.+
T Consensus 16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~ 94 (331)
T cd05624 16 EVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK 94 (331)
T ss_pred EEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHh-CCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence 4678888889999999999752 122334557778888766 5999999999999999999999999999 99999865
No 126
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.12 E-value=1.5e-09 Score=69.43 Aligned_cols=75 Identities=9% Similarity=0.253 Sum_probs=63.2
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+.+....++..+|+|.+... .+......+..|+.++.. .+|||++++++++...+..|+++||+++ +|.+++.
T Consensus 17 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~ 94 (267)
T cd08228 17 EVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQ-LNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIK 94 (267)
T ss_pred eEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHh-CCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHH
Confidence 4677888889999999988642 233445678889999887 5999999999999999999999999999 9988875
No 127
>KOG0694|consensus
Probab=99.12 E-value=2.3e-10 Score=81.81 Aligned_cols=72 Identities=13% Similarity=0.093 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
||-|+..+.+++.+|||.++.. ..+++.+....|-.|+...-.||++++++++|+..+++|.+|||+.| ++.
T Consensus 383 kV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~ 457 (694)
T KOG0694|consen 383 KVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLM 457 (694)
T ss_pred eEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEE
Confidence 7899999999999999999864 34456888999999988766899999999999999999999999999 843
No 128
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.12 E-value=3.9e-10 Score=74.97 Aligned_cols=76 Identities=14% Similarity=0.116 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|++.... .......+..|+.++.. .+||||+++++++..++.+|++|||+++ +|.+++.+
T Consensus 16 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (350)
T cd05573 16 EVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-ADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIR 94 (350)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHh-cCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHH
Confidence 57888888899999999997531 22345667889999887 5999999999999999999999999999 99998865
No 129
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.11 E-value=1.1e-09 Score=71.26 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=63.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+++.+|+|.+.... .....+.+.+|+.++.. ++||||+++++++...+.++++|||+++ +|.+++++
T Consensus 16 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 94 (290)
T cd05580 16 RVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQS-IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK 94 (290)
T ss_pred EEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHH
Confidence 46778888899999999997532 22345678899999887 4899999999999999999999999988 99988864
No 130
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.11 E-value=1.7e-09 Score=68.87 Aligned_cols=76 Identities=24% Similarity=0.280 Sum_probs=65.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+.........+.+..|+..+... .|||++++++.+...+.+++++||+++ +|.+++..
T Consensus 16 ~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 92 (264)
T cd06623 16 VVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKK 92 (264)
T ss_pred EEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHH
Confidence 46788888899999999997654434567788999998884 899999999999999999999999998 99998864
No 131
>KOG0585|consensus
Probab=99.11 E-value=2.8e-10 Score=79.18 Aligned_cols=69 Identities=9% Similarity=0.075 Sum_probs=57.6
Q ss_pred ccceeEEEccCCCEEEEEEEeecC-------------CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEe
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTV-------------NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICM 74 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~-------------~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~ 74 (89)
-+|+||++..++..||+|+++... .....+++.+|++||.+ ++|||||+++.+.-++ +.+|+|+
T Consensus 111 GkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk-l~H~nVV~LiEvLDDP~s~~~YlVl 189 (576)
T KOG0585|consen 111 GKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK-LHHPNVVKLIEVLDDPESDKLYLVL 189 (576)
T ss_pred ceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh-cCCcCeeEEEEeecCcccCceEEEE
Confidence 479999999999999999997521 11235689999999988 5999999999998774 5899999
Q ss_pred cchhc
Q psy13291 75 EVMDT 79 (89)
Q Consensus 75 E~~~~ 79 (89)
|||..
T Consensus 190 ey~s~ 194 (576)
T KOG0585|consen 190 EYCSK 194 (576)
T ss_pred EeccC
Confidence 99986
No 132
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.11 E-value=1.3e-09 Score=72.08 Aligned_cols=77 Identities=8% Similarity=0.015 Sum_probs=62.5
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....++..+|+|++... ......+.+..|..++....+|++|+.+++++...+.+|++|||+++ +|.+++..
T Consensus 15 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~ 94 (324)
T cd05587 15 KVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 94 (324)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHH
Confidence 4788888889999999999753 12334567788999988764556788899999999999999999999 99888754
No 133
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.11 E-value=8.9e-10 Score=70.74 Aligned_cols=75 Identities=12% Similarity=0.145 Sum_probs=58.8
Q ss_pred ceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++... .....+|+|.+...........+.+|+.++.. .+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus 11 v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 88 (269)
T cd05042 11 VLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRE-LNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRS 88 (269)
T ss_pred EEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHh-CCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHh
Confidence 4555322 24457888887655444456678899999876 5999999999999999999999999999 99998865
No 134
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.11 E-value=1.6e-09 Score=69.12 Aligned_cols=76 Identities=12% Similarity=0.265 Sum_probs=63.8
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|..+|+|.+... .+....+.+.+|+.++.. .+|||++++++++...+..+++|||+++ +|.+++..
T Consensus 17 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 95 (267)
T cd08224 17 VVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQ-LDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKH 95 (267)
T ss_pred EEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHh-CCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHH
Confidence 4677788889999999998642 233346778899999888 5999999999999999999999999999 99988854
No 135
>KOG0661|consensus
Probab=99.11 E-value=3.6e-11 Score=83.31 Aligned_cols=77 Identities=9% Similarity=0.056 Sum_probs=63.8
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-EEEEEecchhccHHHHHhhc
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-DVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-~~~iv~E~~~~sL~~~l~~~ 88 (89)
|++|.+..+|..||||.|....-..+.-.-++|+.-|.++-.|||||.+++++.+++ .+|+|||||+.+|.++++..
T Consensus 26 V~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R 103 (538)
T KOG0661|consen 26 VYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR 103 (538)
T ss_pred EEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhhhhHHHHHhhc
Confidence 788999999999999999764333223334789999998634999999999999988 99999999999999998753
No 136
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.11 E-value=5.1e-10 Score=72.43 Aligned_cols=75 Identities=12% Similarity=0.102 Sum_probs=61.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+++.+|+|.+.... .....+.+.+|+.++.. .+||||+++++++...+.+|++|||+++ +++.+.+
T Consensus 16 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 92 (287)
T cd07848 16 VVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRT-LKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEE 92 (287)
T ss_pred EEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHh-CCCccccchhhhEecCCEEEEEEecCCCCHHHHHHh
Confidence 47888888999999999997542 22345677889999887 5999999999999999999999999999 7765543
No 137
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.11 E-value=1e-09 Score=70.46 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=62.5
Q ss_pred cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.++++....++. .+|+|.+...........+..|+.++.. ..||||+++++++..++..+++|||+++ +|+++++
T Consensus 19 ~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 97 (269)
T cd05065 19 EVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ-FDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLR 97 (269)
T ss_pred eEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHh
Confidence 456666665554 6999998765455557789999999887 5999999999999999999999999999 9999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 98 ~ 98 (269)
T cd05065 98 Q 98 (269)
T ss_pred h
Confidence 4
No 138
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.11 E-value=1.1e-09 Score=72.45 Aligned_cols=77 Identities=8% Similarity=0.116 Sum_probs=60.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.+..++..+|+|++.... .......+..|...+.+..+||||+++++++..++.+|++|||+++ +|.+++..
T Consensus 10 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 89 (325)
T cd05602 10 KVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR 89 (325)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHh
Confidence 47888888999999999997532 1222345555665544446999999999999999999999999999 99888764
No 139
>KOG0663|consensus
Probab=99.10 E-value=3e-10 Score=76.34 Aligned_cols=75 Identities=11% Similarity=0.135 Sum_probs=60.3
Q ss_pred ceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~~ 87 (89)
||.|....|+++||+|.++..... -..-..++|+.+|.+ .+|||||.+-.+..- -+.+|||||||+.+|..++..
T Consensus 92 VYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~-~~H~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~ 169 (419)
T KOG0663|consen 92 VYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLK-ARHPNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMET 169 (419)
T ss_pred EEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHh-cCCCCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHh
Confidence 677888899999999999764321 233457889999988 489999999887765 468999999999988888754
No 140
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.10 E-value=7.7e-10 Score=73.24 Aligned_cols=77 Identities=16% Similarity=0.062 Sum_probs=61.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHh--cCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMR--SSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~--~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+++....+|..+|+|.+.... .....+.+.+|..++.. ..+||||+++++++...+.+|++|||+++ +|..++
T Consensus 14 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~ 93 (324)
T cd05589 14 KVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHI 93 (324)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHh
Confidence 47888888899999999997531 22345667777776542 24799999999999999999999999999 998776
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 94 ~~ 95 (324)
T cd05589 94 HT 95 (324)
T ss_pred hc
Confidence 54
No 141
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.10 E-value=1.5e-09 Score=69.38 Aligned_cols=76 Identities=12% Similarity=0.109 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... .....+.+.+|+.++.. .+||||+++++.+..++.+++++||+++ +|.+++.+
T Consensus 8 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (262)
T cd05572 8 RVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEE-CNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRD 86 (262)
T ss_pred EEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHh-CCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhh
Confidence 46788888889999999997543 22345678899999887 4999999999999999999999999999 99998865
No 142
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.10 E-value=1.5e-09 Score=70.10 Aligned_cols=76 Identities=11% Similarity=0.047 Sum_probs=62.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|..+|+|.+.... .......+..|+.+|.. .+|||++.+++++...+.+|++|||+++ +|.+++.+
T Consensus 8 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (277)
T cd05577 8 EVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEK-VSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYN 86 (277)
T ss_pred eEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHh-CCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHH
Confidence 47788888899999999997532 22234556789999887 4899999999999999999999999999 99988754
No 143
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.10 E-value=1.6e-09 Score=69.17 Aligned_cols=77 Identities=10% Similarity=0.081 Sum_probs=60.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|+.+|+|.+.... .......+..|..++....+|||++++++++...+.+|+++||+++ +|.++++.
T Consensus 11 ~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 90 (260)
T cd05611 11 SVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKT 90 (260)
T ss_pred eEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHH
Confidence 46778888899999999986532 1222344566666655556999999999999999999999999999 99998865
No 144
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.10 E-value=2.4e-09 Score=69.63 Aligned_cols=75 Identities=16% Similarity=0.278 Sum_probs=63.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... +....+.+..|+.++.. +.|||++++++.+..++.+|++|||+++ +|+.++.+
T Consensus 27 ~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 102 (292)
T cd06644 27 KVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILAT-CNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLE 102 (292)
T ss_pred EEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHh-CCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHh
Confidence 5788888889999999998743 34456778889999887 5999999999999999999999999999 99887643
No 145
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.09 E-value=1.5e-09 Score=70.58 Aligned_cols=75 Identities=9% Similarity=0.014 Sum_probs=61.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+|..+|+|.+.... .......+.+|+.++.. ++|||++.+++++..++..+++||||++ +|.+++.
T Consensus 15 ~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~ 92 (285)
T cd05631 15 EVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEK-VNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIY 92 (285)
T ss_pred EEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHh-cCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHH
Confidence 46788888899999999997532 12223457789999888 5999999999999999999999999999 9987764
No 146
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.09 E-value=1.3e-09 Score=71.53 Aligned_cols=77 Identities=14% Similarity=0.206 Sum_probs=62.0
Q ss_pred cceeEEEccCCCE--EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDS--EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~--~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+|.. +|+|.+...........+.+|+.++.++.+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 22 ~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 101 (303)
T cd05088 22 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 101 (303)
T ss_pred eEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHh
Confidence 4677877777754 57777764444445667888999988865899999999999999999999999999 99998864
No 147
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.09 E-value=2.7e-09 Score=69.10 Aligned_cols=75 Identities=16% Similarity=0.285 Sum_probs=63.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.++.+....++..+|+|.+..... ..+.+..|+.++.. .+|||++++++++..++..|+++||+++ +|.+++...
T Consensus 34 ~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~ 109 (286)
T cd06614 34 EVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKD-CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN 109 (286)
T ss_pred EEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHH-CCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHh
Confidence 467777777899999999975433 35678889999887 5999999999999999999999999998 999998753
No 148
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.08 E-value=1.8e-09 Score=68.44 Aligned_cols=75 Identities=16% Similarity=0.175 Sum_probs=61.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.. .++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..|++|||+++ +|.+++..
T Consensus 10 ~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 85 (250)
T cd05085 10 EVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQ-YDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRK 85 (250)
T ss_pred eEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHh-CCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHh
Confidence 4566664 46788999998765544445678899999887 5999999999999999999999999999 99988754
No 149
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.08 E-value=2.5e-09 Score=68.64 Aligned_cols=75 Identities=15% Similarity=0.007 Sum_probs=63.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+.+....++..+|+|.+.... ....+.+.+|+.++.. .+||||+++++++..++..++++||+++ +|.+++..
T Consensus 23 ~v~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 98 (268)
T cd06624 23 IVYAARDLSTQVRIAIKEIPERD-SRYVQPLHEEIALHSY-LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRS 98 (268)
T ss_pred EEEEeEecCCCcEEEEEEecCCC-HHHHHHHHHHHHHHHh-cCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHH
Confidence 46777777888999999887543 3346678899999887 5999999999999999999999999999 99998864
No 150
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.08 E-value=1.9e-09 Score=69.12 Aligned_cols=76 Identities=21% Similarity=0.224 Sum_probs=61.6
Q ss_pred cceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+.|....+ ...+|+|.+...........+..|+.++.. .+||||+++++.+...+..+++|||+++ +|++++.
T Consensus 19 ~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~ 97 (266)
T cd05033 19 EVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQ-FDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLR 97 (266)
T ss_pred eEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHh-CCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHH
Confidence 4556655433 457999998765555556778899999887 5999999999999999999999999999 9999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 98 ~ 98 (266)
T cd05033 98 E 98 (266)
T ss_pred h
Confidence 4
No 151
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.08 E-value=1.7e-09 Score=69.97 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=60.7
Q ss_pred cceeEEE----ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLA----RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~----~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+++.. ..++..+|+|.+...........+.+|+.++.. ++||||+++++.+..++..|++|||+++ +|.+++
T Consensus 20 ~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l 98 (283)
T cd05090 20 KIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAE-LHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFL 98 (283)
T ss_pred ceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhh-CCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHH
Confidence 3555553 235578999999765545556778899999887 5999999999999999999999999999 999887
Q ss_pred h
Q psy13291 86 T 86 (89)
Q Consensus 86 ~ 86 (89)
.
T Consensus 99 ~ 99 (283)
T cd05090 99 I 99 (283)
T ss_pred H
Confidence 4
No 152
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.08 E-value=2.1e-09 Score=68.91 Aligned_cols=76 Identities=13% Similarity=0.180 Sum_probs=61.9
Q ss_pred cceeEEEccCCC---EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPD---SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~---~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....++. .+|+|.+.........+.+..|+.++.. ..|||++++++++...+.++++|||+++ +|.+++.
T Consensus 20 ~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 98 (268)
T cd05063 20 EVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQ-FSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLR 98 (268)
T ss_pred cEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHH
Confidence 466666655554 6999998765444556778899999877 5999999999999999999999999999 9999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 99 ~ 99 (268)
T cd05063 99 D 99 (268)
T ss_pred h
Confidence 4
No 153
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.08 E-value=3e-09 Score=69.62 Aligned_cols=75 Identities=9% Similarity=0.211 Sum_probs=62.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+...... ..+.+..|+.++.. .+|||++++++.+..++..|++|||+++ +|.+++..
T Consensus 34 ~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (297)
T cd06656 34 TVYTAIDIATGQEVAIKQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (297)
T ss_pred EEEEEEECCCCCEEEEEEEecCccc-hHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHHh
Confidence 4677777789999999999754332 34667889999877 5999999999999999999999999999 99988754
No 154
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.08 E-value=2.4e-09 Score=70.84 Aligned_cols=77 Identities=10% Similarity=0.014 Sum_probs=62.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+.... .....+....|..++....+||+|+.+++++...+.+|++|||+++ +|.+.+..
T Consensus 15 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~ 94 (323)
T cd05616 15 KVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQ 94 (323)
T ss_pred EEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHH
Confidence 57888888899999999997532 2233455677888877766799999999999999999999999999 99887754
No 155
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.08 E-value=1.8e-09 Score=70.86 Aligned_cols=69 Identities=17% Similarity=0.158 Sum_probs=58.0
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++..+|+|.+.........+.+..|+.++..+.+||||+++++++...+.+|++|||+++ +|.++++.
T Consensus 63 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 132 (302)
T cd05055 63 DAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRR 132 (302)
T ss_pred CceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHh
Confidence 3456799999876544555678899999998855899999999999999999999999998 99998864
No 156
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.07 E-value=2.2e-09 Score=68.14 Aligned_cols=76 Identities=13% Similarity=0.174 Sum_probs=64.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... .......+.+|+.+|.. .+|||++++++.+...+..+++|||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 92 (256)
T cd08220 15 IVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKL-LSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQK 92 (256)
T ss_pred EEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhh-CCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHH
Confidence 35677788899999999997542 33456778899999887 5999999999999999999999999999 99998864
No 157
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.07 E-value=1.6e-09 Score=69.26 Aligned_cols=76 Identities=14% Similarity=0.161 Sum_probs=63.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.++++....++..+|+|.+..... ....+.+..|+.++.. +.|||++++++.+...+..++++||+++ +|.++
T Consensus 15 ~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~ 93 (268)
T cd06630 15 SCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMAR-LNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHL 93 (268)
T ss_pred EEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHH-cCCCceehhhceeccCCeEEEEEeccCCCcHHHH
Confidence 356777778999999999975321 1235678899999888 5999999999999999999999999999 99998
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 94 l~~ 96 (268)
T cd06630 94 LSK 96 (268)
T ss_pred HHH
Confidence 864
No 158
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.07 E-value=3.6e-09 Score=67.40 Aligned_cols=76 Identities=12% Similarity=0.207 Sum_probs=63.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+.........+.+.+|+.++.. ..|||++++++.+...+..|+++||+++ +|.++++.
T Consensus 16 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~ 92 (267)
T cd06610 16 VVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQ-CNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKS 92 (267)
T ss_pred EEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHh-cCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHH
Confidence 3566666778899999999754433356788999999877 5999999999999999999999999999 99998864
No 159
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.07 E-value=1.6e-09 Score=69.68 Aligned_cols=76 Identities=20% Similarity=0.236 Sum_probs=61.7
Q ss_pred cceeEEEc-----cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLAR-----LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~-----~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++... .++..+|+|.+......+..+.+.+|+.+|.. +.||||+++++.+...+..|++|||+++ +|.++
T Consensus 20 ~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 98 (280)
T cd05049 20 KVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTN-FQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKF 98 (280)
T ss_pred eEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHh-cCCCCchheeeEEecCCCeEEEEecCCCCCHHHH
Confidence 35555443 34578999999765444456788999999887 5999999999999999999999999999 99998
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
++.
T Consensus 99 i~~ 101 (280)
T cd05049 99 LRS 101 (280)
T ss_pred HHh
Confidence 864
No 160
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.07 E-value=3.8e-09 Score=69.06 Aligned_cols=75 Identities=9% Similarity=0.213 Sum_probs=62.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+...... ..+.+.+|+.++.. ..|||++++++.+..++..|++|||+++ +|.+++..
T Consensus 35 ~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~-~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (296)
T cd06654 35 TVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 110 (296)
T ss_pred EEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHh-CCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHHh
Confidence 3567777788999999999754333 35668889999877 5999999999999999999999999999 99998764
No 161
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.07 E-value=2.3e-09 Score=79.83 Aligned_cols=76 Identities=16% Similarity=0.130 Sum_probs=64.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|.+..+|+.+|+|++.... .....+++.+|+.++.. .+||||+++++.+...+..|++|||++| +|.+++..
T Consensus 17 ~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~-L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s 95 (932)
T PRK13184 17 EVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAAD-LIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKS 95 (932)
T ss_pred EEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHh-CCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHH
Confidence 47888888999999999997542 23345678999999887 5999999999999999999999999999 99998863
No 162
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.07 E-value=3e-09 Score=69.21 Aligned_cols=75 Identities=9% Similarity=0.016 Sum_probs=62.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+++.+|+|.+.... .......+..|+.++.. ++|||++.+++++...+.+|++|||+++ +|.+++.
T Consensus 15 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~ 92 (285)
T cd05630 15 EVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEK-VNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY 92 (285)
T ss_pred EEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHh-CCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHH
Confidence 36788888999999999987532 22223557789999887 5999999999999999999999999999 9988874
No 163
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.07 E-value=2e-09 Score=71.12 Aligned_cols=76 Identities=12% Similarity=0.192 Sum_probs=59.9
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~ 84 (89)
.|+++....+|..+|+|.+.... .......+.+|+.++.. ++||||+++++++...+ .+|++||||+++|.++
T Consensus 15 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 93 (338)
T cd07859 15 VVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRL-LRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQV 93 (338)
T ss_pred EEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHh-CCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHH
Confidence 47788888899999999997432 22334568899999887 59999999999886532 5899999997788777
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 94 l~~ 96 (338)
T cd07859 94 IKA 96 (338)
T ss_pred HHh
Confidence 754
No 164
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.06 E-value=3.4e-09 Score=67.21 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=63.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.++.+....++..+|+|.+..... ....+.+.+|++++.. .+|||++++++.+...+.+++++||+++ +|.+++
T Consensus 15 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 93 (258)
T cd06632 15 SVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSK-LQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL 93 (258)
T ss_pred eEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHh-cCCCCchheeeeEecCCeEEEEEEecCCCcHHHHH
Confidence 567777777899999999875321 2345678899999887 5999999999999999999999999999 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
.+
T Consensus 94 ~~ 95 (258)
T cd06632 94 KK 95 (258)
T ss_pred Hh
Confidence 65
No 165
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.06 E-value=2.4e-09 Score=68.90 Aligned_cols=77 Identities=14% Similarity=0.209 Sum_probs=62.1
Q ss_pred cceeEEEccCCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+|. .+|+|.+.........+.+..|+.++..+.+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus 10 ~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 89 (270)
T cd05047 10 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK 89 (270)
T ss_pred eEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHh
Confidence 356676666665 468888875444455677889999988866899999999999999999999999999 99998864
No 166
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.06 E-value=3.4e-09 Score=67.60 Aligned_cols=76 Identities=17% Similarity=0.187 Sum_probs=62.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.++.+....++..+|+|.+..... ....+.+.+|+.++.. ++||||+++++++..++.+++++||+++ +|.+++
T Consensus 17 ~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~ 95 (263)
T cd06625 17 RVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKN-LQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQL 95 (263)
T ss_pred EEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHh-CCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHH
Confidence 467777788999999999875321 1234578889999887 5999999999999999999999999999 998887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 96 ~~ 97 (263)
T cd06625 96 KA 97 (263)
T ss_pred HH
Confidence 54
No 167
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.06 E-value=1.9e-09 Score=68.93 Aligned_cols=76 Identities=11% Similarity=0.252 Sum_probs=63.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
-|+++....+|..+|+|.+.... +.....++.+|+.++.. .+||||+++++++..++..+++|||+++ +|.++++.
T Consensus 17 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 95 (267)
T cd08229 17 EVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQ-LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 95 (267)
T ss_pred EEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHH-ccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHH
Confidence 36778888899999999887532 22345678899999887 5999999999999999999999999999 99998763
No 168
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.06 E-value=2.1e-09 Score=71.20 Aligned_cols=75 Identities=9% Similarity=-0.016 Sum_probs=59.2
Q ss_pred ceeEEE---ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 12 PELGLA---RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~---~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
|+++.. ..+++.+|+|.+.... .......+..|+.+|.. ++||||+++++.+..++.+|++|||+++ +|.++
T Consensus 12 V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~ 90 (323)
T cd05584 12 VFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEA-VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMH 90 (323)
T ss_pred EEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHh-CCCCchhceeeEEecCCeEEEEEeCCCCchHHHH
Confidence 455554 3578899999997531 22234567789999887 5999999999999999999999999999 99888
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+.+
T Consensus 91 ~~~ 93 (323)
T cd05584 91 LER 93 (323)
T ss_pred HHH
Confidence 754
No 169
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.06 E-value=2.8e-09 Score=69.03 Aligned_cols=74 Identities=55% Similarity=0.857 Sum_probs=61.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~ 84 (89)
.|+.+.+..+|..+|+|.+...........+..|+.++.+..+||||+++++.+..++..|++|||+++++.++
T Consensus 19 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l 92 (288)
T cd06616 19 TVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKF 92 (288)
T ss_pred EEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHH
Confidence 46778888899999999997654444566788999998886569999999999999999999999988755544
No 170
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.06 E-value=1.8e-09 Score=69.45 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=59.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....++..+|+|.+.....+........|+.++.++.+|||++++++++..+ +.++++|||+++++.+.+.
T Consensus 14 ~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~ 91 (282)
T cd07831 14 EVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDMNLYELIK 91 (282)
T ss_pred eEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCccHHHHHH
Confidence 577888888999999999875433323334567888888765799999999999987 8999999999985555544
No 171
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.06 E-value=2.4e-09 Score=69.03 Aligned_cols=75 Identities=9% Similarity=0.153 Sum_probs=60.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|+.+....+|..+|+|.+..... ......+..|+.++.. ++|||++++++++..++..|++|||++++|.+++.
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~ 90 (285)
T cd07861 15 VVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKE-LQHPNIVCLQDVLMQESRLYLIFEFLSMDLKKYLD 90 (285)
T ss_pred EEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHh-cCCCCEeeeEEEEeeCCeEEEEEecCCCCHHHHHh
Confidence 467788888999999999865322 2234567789999887 48999999999999999999999999887666654
No 172
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.06 E-value=2.8e-09 Score=70.00 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=64.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....++..+|+|.+...... ...+.+..|+.++.. ..||||+++++.+...+..|++|||+.+ +|.+++..
T Consensus 16 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 94 (316)
T cd05574 16 RVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILAT-LDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQR 94 (316)
T ss_pred EEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHh-CCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHh
Confidence 4678888889999999999764322 346678899999887 5899999999999999999999999999 99998864
No 173
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.05 E-value=2e-09 Score=69.80 Aligned_cols=67 Identities=10% Similarity=0.083 Sum_probs=57.5
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+...........+.+|+.++.. .+|||++++++++..++..++++||+++ +|.+++..
T Consensus 34 ~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 101 (288)
T cd05050 34 PFTMVAVKMLKEEASADMQADFQREAALMAE-FDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRH 101 (288)
T ss_pred cceeEEEEecCCCcCHHHHHHHHHHHHHHHh-cCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHH
Confidence 5678999999765555556778899999887 5999999999999999999999999999 99999864
No 174
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.05 E-value=3.2e-09 Score=67.84 Aligned_cols=76 Identities=16% Similarity=0.267 Sum_probs=62.1
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhc-cHH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDT-SLD 82 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~-sL~ 82 (89)
-.+++|....+++.+|+|.+..... ..+.+..|+.++....+||||+++++.+.... .+|++|||+++ +|.
T Consensus 20 ~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~ 97 (275)
T cd06608 20 GKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVT 97 (275)
T ss_pred eEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHH
Confidence 3577888888899999999875432 34678899999888668999999999997644 59999999999 999
Q ss_pred HHHhh
Q psy13291 83 KFYTK 87 (89)
Q Consensus 83 ~~l~~ 87 (89)
+++..
T Consensus 98 ~~~~~ 102 (275)
T cd06608 98 DLVKG 102 (275)
T ss_pred HHHHH
Confidence 88764
No 175
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.05 E-value=2.5e-09 Score=70.91 Aligned_cols=77 Identities=10% Similarity=0.027 Sum_probs=61.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcC--CCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSS--DCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~--~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+++....+|..+|+|++.... ..........|..++.... +||||+.+++.+...+.+|++|||+++ +|.+++
T Consensus 8 ~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l 87 (330)
T cd05586 8 QVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHL 87 (330)
T ss_pred EEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHH
Confidence 57888899999999999997431 1223445566777766544 899999999999999999999999999 988777
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 88 ~~ 89 (330)
T cd05586 88 QK 89 (330)
T ss_pred Hh
Confidence 54
No 176
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.05 E-value=2.7e-09 Score=68.94 Aligned_cols=75 Identities=19% Similarity=0.177 Sum_probs=61.5
Q ss_pred ceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 12 PELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
|+.+.... ++..+|+|.+...........+..|+.++.. ++||||+++++.+...+..+++|||+++ +|.+++
T Consensus 22 vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i 100 (277)
T cd05036 22 VYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSK-FNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFL 100 (277)
T ss_pred EEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHh-CCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHH
Confidence 55666655 6778999988755444445678899999887 5999999999999999999999999999 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 101 ~~ 102 (277)
T cd05036 101 RE 102 (277)
T ss_pred HH
Confidence 64
No 177
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.05 E-value=2.6e-09 Score=68.92 Aligned_cols=67 Identities=15% Similarity=0.275 Sum_probs=55.7
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+...........+.+|+.++.. .+||||+++++.+...+..+++|||+++ +|+++++.
T Consensus 35 ~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 102 (277)
T cd05062 35 PETRVAIKTVNEAASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS 102 (277)
T ss_pred ceeEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHH
Confidence 4567999988654433445678899999887 5999999999999988999999999999 99998864
No 178
>KOG0579|consensus
Probab=99.05 E-value=2.5e-11 Score=87.25 Aligned_cols=74 Identities=19% Similarity=0.249 Sum_probs=65.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
|||.|.++.++-..|.|+|. +...++.++++-|+.||.. +.||+|+.++++|+.++.+||++|||.| .++.++-
T Consensus 47 KVyKA~nket~~lAAaKvIe-tkseEELEDylVEIeILa~-CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaiml 121 (1187)
T KOG0579|consen 47 KVYKAVNKETKLLAAAKVIE-TKSEEELEDYLVEIEILAE-CDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIML 121 (1187)
T ss_pred hhhhhhcccchhhhhhhhhc-ccchhHHhhhhhhhhhhhc-CCChHHHHHHHHHhccCceEEEEeecCCchHhHHHH
Confidence 68888888889899999997 4455679999999999988 5899999999999999999999999999 8887763
No 179
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.04 E-value=5.3e-09 Score=68.59 Aligned_cols=75 Identities=11% Similarity=0.234 Sum_probs=60.7
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....+|..+|+|.+... ......+.+.+|+.++.. .+|||++++++++...+..|+++||++|++.+++.
T Consensus 30 ~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~~~~~~~~~~~~~lv~e~~~g~l~~~~~ 106 (307)
T cd06607 30 AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQ-LRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILE 106 (307)
T ss_pred EEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHh-CCCCCEEEEEEEEEeCCeEEEEHHhhCCCHHHHHH
Confidence 4677777788999999998643 223345678899999887 59999999999999999999999999996555543
No 180
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.04 E-value=3.1e-09 Score=69.92 Aligned_cols=68 Identities=10% Similarity=0.226 Sum_probs=57.0
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+..+|+|.+...........+..|+.++..+.+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 43 ~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~ 111 (314)
T cd05099 43 QTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRA 111 (314)
T ss_pred cceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHh
Confidence 345689998875544555677889999988765799999999999999999999999999 99998864
No 181
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.04 E-value=4.2e-09 Score=66.82 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=62.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++.... +..+|+|.+...........+..|+.++.. +.||||+++++++...+..|++|||+++ +|.+++..
T Consensus 10 ~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~ 85 (251)
T cd05041 10 DVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQ-YDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRK 85 (251)
T ss_pred eEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHh
Confidence 466676656 899999998765444456778899999887 5999999999999999999999999999 99988854
No 182
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.04 E-value=3.3e-09 Score=68.47 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=61.4
Q ss_pred cceeEEEccCC-----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDP-----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~-----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++.....+ ..+|+|.+.........+.+.+|+.++.. .+||||+.+++++...+..|++|||+++ +|.++
T Consensus 20 ~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~ 98 (283)
T cd05048 20 KVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSD-LQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEF 98 (283)
T ss_pred cEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHh-cCCcccceEEEEEcCCCceEEEEecCCCCcHHHH
Confidence 45555544333 67999998765555556778899999887 5999999999999999999999999999 99998
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 99 l~~ 101 (283)
T cd05048 99 LVR 101 (283)
T ss_pred HHh
Confidence 864
No 183
>KOG0983|consensus
Probab=99.04 E-value=4.4e-10 Score=74.18 Aligned_cols=78 Identities=32% Similarity=0.454 Sum_probs=68.8
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
--|..+.++++|..+|||.+..+.+.++..+++..+.++...-++|.||+++|+|..+..+||.||.|..-++.++++
T Consensus 106 G~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C~ekLlkr 183 (391)
T KOG0983|consen 106 GQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTCAEKLLKR 183 (391)
T ss_pred cceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHHHHHHHHH
Confidence 357788899999999999999988888899999999998776568999999999999999999999998766666654
No 184
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.04 E-value=4.6e-09 Score=66.83 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=63.1
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|+.+|+|.+... ........+.+|+.++.. .+||||+++++.+...+..|+++||+++ +|.+++..
T Consensus 15 ~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 92 (256)
T cd08218 15 KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSN-MKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA 92 (256)
T ss_pred EEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHh-CCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHh
Confidence 3567777788999999999753 233445678899999887 5999999999999999999999999999 99887753
No 185
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.04 E-value=1.9e-09 Score=70.30 Aligned_cols=65 Identities=14% Similarity=0.253 Sum_probs=55.6
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+.........+.+.+|++++.. ++|||++++++.+...+..|++|||+++ +|.+++..
T Consensus 45 ~~vavK~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 110 (295)
T cd05097 45 VLVAVKMLRADVTKTARNDFLKEIKIMSR-LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQ 110 (295)
T ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHh-CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHh
Confidence 35899999765555556778999999888 5999999999999999999999999999 99988753
No 186
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.03 E-value=4e-09 Score=68.44 Aligned_cols=77 Identities=10% Similarity=0.172 Sum_probs=60.7
Q ss_pred cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++.... ....+|+|.+...........+.+|+.++..+.+||||+++++++...+.+|++|||+++ +|.++
T Consensus 27 ~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~ 106 (293)
T cd05053 27 QVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDF 106 (293)
T ss_pred cEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHH
Confidence 345555443 336789999876544445667889999988755899999999999999999999999999 99998
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
++.
T Consensus 107 l~~ 109 (293)
T cd05053 107 LRA 109 (293)
T ss_pred HHh
Confidence 864
No 187
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.03 E-value=2.1e-09 Score=69.04 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=61.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCC------H---HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-c
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN------T---QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-S 80 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~------~---~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-s 80 (89)
.|+++....+|..+|+|.+..... . ...+.+..|+.++.. .+|||++++++++..++..+++|||+++ +
T Consensus 16 ~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 94 (272)
T cd06629 16 RVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKD-LDHLNIVQYLGFETTEEYLSIFLEYVPGGS 94 (272)
T ss_pred EEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHh-cCCCCcceEEEEeccCCceEEEEecCCCCc
Confidence 577888888899999998864211 0 123467789999877 5999999999999999999999999999 9
Q ss_pred HHHHHhh
Q psy13291 81 LDKFYTK 87 (89)
Q Consensus 81 L~~~l~~ 87 (89)
|.+++++
T Consensus 95 L~~~l~~ 101 (272)
T cd06629 95 IGSCLRT 101 (272)
T ss_pred HHHHHhh
Confidence 9998865
No 188
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.03 E-value=1.3e-09 Score=69.12 Aligned_cols=76 Identities=16% Similarity=0.170 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+..... ....+.+..|+.++.. ..|||++++++.+...+..|+++||+++ +|.+++.+
T Consensus 8 ~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 86 (265)
T cd05579 8 RVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQ-AQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLEN 86 (265)
T ss_pred EEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHh-CCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHH
Confidence 478888888899999999975322 2345678889999887 4899999999999999999999999999 99998865
No 189
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.03 E-value=3.2e-09 Score=68.79 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=57.3
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..++..+|+|.+...........+.+|+.++.. ..|||++++++++... ..++++|||++| +|.+++.+
T Consensus 30 ~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~ 101 (284)
T cd05079 30 DNTGEQVAVKSLKPESGGNHIADLKKEIEILRN-LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR 101 (284)
T ss_pred CCccceEEEEEcCccccHHHHHHHHHHHHHHHh-CCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHh
Confidence 457888999998755444456778999999888 5999999999988775 579999999999 99998854
No 190
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.03 E-value=3.8e-09 Score=70.19 Aligned_cols=76 Identities=11% Similarity=0.040 Sum_probs=62.1
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+... ........+..|..++.. .+||||+.+++++..++.+|++|||+++ +|.+++.+
T Consensus 16 ~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 94 (332)
T cd05623 16 EVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSK 94 (332)
T ss_pred EEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhh-CCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHH
Confidence 4677888889999999999642 122234457778888776 5999999999999999999999999999 99999865
No 191
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.03 E-value=3.9e-09 Score=66.86 Aligned_cols=76 Identities=18% Similarity=0.171 Sum_probs=62.9
Q ss_pred cceeEEEccCC----CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDP----DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~----~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.++++....++ ..+|+|.+...........+..|+.++..+ +||||+++++.+...+..+++|||+++ +|.+++
T Consensus 14 ~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~ 92 (258)
T smart00219 14 EVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYL 92 (258)
T ss_pred ceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEEeccCCCCHHHHH
Confidence 35566665555 889999997655444577889999998885 999999999999999999999999999 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 93 ~~ 94 (258)
T smart00219 93 RK 94 (258)
T ss_pred Hh
Confidence 64
No 192
>KOG4278|consensus
Probab=99.03 E-value=2.2e-10 Score=82.39 Aligned_cols=75 Identities=16% Similarity=0.126 Sum_probs=61.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhcC
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKVD 89 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~~ 89 (89)
||.++.+.-.-.+|||.+.. +.-+.+.|+.|.++|.. +.|||+|+++|+|..+..+|||+|||.+ +|.++|+.++
T Consensus 283 VYeGvWKkyslTvAVKtLKE--DtMeveEFLkEAAvMKe-ikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecn 358 (1157)
T KOG4278|consen 283 VYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECN 358 (1157)
T ss_pred eeeeeeeccceeeehhhhhh--cchhHHHHHHHHHHHHh-hcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhc
Confidence 34444444555688888864 34458899999999766 6999999999999999999999999999 9999998764
No 193
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.02 E-value=3.1e-09 Score=68.68 Aligned_cols=74 Identities=16% Similarity=0.282 Sum_probs=58.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++....++..+|+|.+..... ....+..|+.++..+.+||||+++++++.. ++..+++|||+++ +|.++
T Consensus 33 ~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 110 (286)
T cd06638 33 KVFKVLNKKNGSKAAVKILDPIHD--IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDL 110 (286)
T ss_pred EEEEEEECCCCceeEEEeeccccc--hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHH
Confidence 567888888999999998864322 234567788888875589999999998853 4579999999999 99887
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
+.
T Consensus 111 l~ 112 (286)
T cd06638 111 VK 112 (286)
T ss_pred HH
Confidence 64
No 194
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.02 E-value=6.6e-09 Score=66.62 Aligned_cols=75 Identities=15% Similarity=0.283 Sum_probs=61.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-sL~~ 83 (89)
.|+++....+++.+|+|.+..... ....+..|+.++....+|||++++++.+... +.+|++|||+++ +|.+
T Consensus 21 ~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (272)
T cd06637 21 QVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTD 98 (272)
T ss_pred EEEEEEEcCCCcEEEEEEEEcCCc--cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHH
Confidence 467788888999999999975432 2456778999988765899999999998763 468999999999 9999
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 99 ~l~~ 102 (272)
T cd06637 99 LIKN 102 (272)
T ss_pred HHHh
Confidence 8764
No 195
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.02 E-value=4.9e-09 Score=67.06 Aligned_cols=76 Identities=12% Similarity=0.159 Sum_probs=61.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH--------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT--------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL 81 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~--------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL 81 (89)
.++.|....++..+|+|.+...... ...+.+.+|+.++.. ++||||+++++.+...+..++++||+++ +|
T Consensus 15 ~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 93 (267)
T cd06628 15 SVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKE-LQHENIVQYLGSSLDADHLNIFLEYVPGGSV 93 (267)
T ss_pred EEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHh-cCCCCeeeEEEEEEeCCccEEEEEecCCCCH
Confidence 3567777778899999988643211 123567889999888 4999999999999999999999999999 99
Q ss_pred HHHHhh
Q psy13291 82 DKFYTK 87 (89)
Q Consensus 82 ~~~l~~ 87 (89)
.++++.
T Consensus 94 ~~~l~~ 99 (267)
T cd06628 94 AALLNN 99 (267)
T ss_pred HHHHHh
Confidence 998865
No 196
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.02 E-value=5.4e-09 Score=68.43 Aligned_cols=75 Identities=11% Similarity=0.171 Sum_probs=62.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|+.+|+|.+...... ..+.+.+|+.++.. ++|||++++++.+...+.+|+++||+++ +|.+++..
T Consensus 34 ~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (296)
T cd06655 34 TVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKE-LKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE 109 (296)
T ss_pred EEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHh-cCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh
Confidence 3566777789999999999754322 35667889999877 5999999999999999999999999999 99988764
No 197
>KOG0660|consensus
Probab=99.02 E-value=1.2e-09 Score=73.36 Aligned_cols=76 Identities=16% Similarity=0.167 Sum_probs=64.5
Q ss_pred ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-----CCEEEEEecchhccHHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-----EGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL~~~l 85 (89)
|+.+....+|..||+|.|.... .....++.++|+.+|..+ .|+||+.+++.+.. -+.+|+++|+|+.+|..++
T Consensus 38 VcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~ii 116 (359)
T KOG0660|consen 38 VCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQII 116 (359)
T ss_pred EEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeecccccccccceeEEehhHHhhHHHHHH
Confidence 6778889999999999997542 334678899999999885 79999999999977 2489999999988999999
Q ss_pred hhc
Q psy13291 86 TKV 88 (89)
Q Consensus 86 ~~~ 88 (89)
+..
T Consensus 117 k~~ 119 (359)
T KOG0660|consen 117 KSQ 119 (359)
T ss_pred HcC
Confidence 864
No 198
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.02 E-value=3.9e-09 Score=79.09 Aligned_cols=76 Identities=14% Similarity=0.234 Sum_probs=63.7
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|++|.+..++..+|+|.+... ........+..|+.+|.. +.||||+++++.|... ..+||+|||+++ +|.++|.
T Consensus 28 tVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~-L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~ 106 (1021)
T PTZ00266 28 EVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRE-LKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQ 106 (1021)
T ss_pred EEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHH-cCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHH
Confidence 4788888899999999999754 334456778999999888 5999999999998664 579999999999 9998886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 107 k 107 (1021)
T PTZ00266 107 K 107 (1021)
T ss_pred H
Confidence 4
No 199
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.01 E-value=6.3e-09 Score=75.37 Aligned_cols=76 Identities=14% Similarity=0.159 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|++|....+++.||+|++... ........+..|+.++.. +.||||+++++++...+.+|++|||+.| +|.+++..
T Consensus 19 ~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~-l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~ 97 (669)
T cd05610 19 KVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALAL-SKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHI 97 (669)
T ss_pred EEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHh-cCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHh
Confidence 5788888889999999999753 233445678889999876 5999999999999999999999999999 99998864
No 200
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.01 E-value=8.6e-09 Score=66.65 Aligned_cols=75 Identities=17% Similarity=0.253 Sum_probs=62.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+... .....+.+..|+.++.. .+|||++++++.+..++..|+++||+++ +|..++.+
T Consensus 20 ~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~ 95 (282)
T cd06643 20 KVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILAS-CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE 95 (282)
T ss_pred EEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHH-CCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHh
Confidence 4677888888999999998643 33446778889999887 5999999999999999999999999999 99887643
No 201
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.01 E-value=4.3e-09 Score=66.79 Aligned_cols=73 Identities=16% Similarity=0.331 Sum_probs=62.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... ..+.+.+|+.++..+ +|||++++++.+......|+++||+++ +|.+++..
T Consensus 18 ~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~ 91 (256)
T cd06612 18 SVYKAIHKETGQVVAIKVVPVEE---DLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKI 91 (256)
T ss_pred EEEEEEEcCCCcEEEEEEeecHH---HHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHh
Confidence 46777777888999999986432 267788999998875 999999999999999999999999999 99998854
No 202
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.01 E-value=8.4e-09 Score=66.08 Aligned_cols=76 Identities=17% Similarity=0.158 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~ 83 (89)
.|+++....+|..+|+|.+.... .....+.+.+|+.++.. +.||||+++++++..+ ..++++|||+++ +|.+
T Consensus 17 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~ 95 (265)
T cd06652 17 RVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKN-LLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKD 95 (265)
T ss_pred EEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHh-cCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHH
Confidence 57788888899999999986421 12345678889999887 5999999999988764 578999999999 9998
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 96 ~l~~ 99 (265)
T cd06652 96 QLKS 99 (265)
T ss_pred HHHH
Confidence 8754
No 203
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.01 E-value=4.6e-09 Score=68.18 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=58.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
.|+++....+|..+|+|.+...........+.+|+.++.. ++||||+++++++..++..|+++||+++++.+.+
T Consensus 20 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~lv~e~~~~~l~~~~ 93 (291)
T cd07870 20 TVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKG-LKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYM 93 (291)
T ss_pred EEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHh-cCCCCEeEEEEEEecCCeEEEEEecccCCHHHHH
Confidence 4677888889999999999754333223456789999887 5999999999999999999999999987544443
No 204
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.01 E-value=3.2e-09 Score=68.05 Aligned_cols=74 Identities=18% Similarity=0.146 Sum_probs=62.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+... ......+.+|+.++.. ..|||++++++.+..++.++++|||+++ +|.+++..
T Consensus 21 ~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (263)
T cd05052 21 EVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKE-IKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE 95 (263)
T ss_pred eEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHh-CCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHh
Confidence 4667777788999999988643 2235678899999888 5999999999999999999999999999 99998854
No 205
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.01 E-value=5.4e-09 Score=68.55 Aligned_cols=67 Identities=9% Similarity=0.233 Sum_probs=56.3
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+..+|+|.+...........+..|+.++..+.+||||+++++++...+..|++|||+++ +|.+++..
T Consensus 50 ~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 117 (307)
T cd05098 50 VTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 117 (307)
T ss_pred cceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 35699999875444444667888999988865899999999999999999999999999 99999864
No 206
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.00 E-value=5.6e-09 Score=68.32 Aligned_cols=75 Identities=13% Similarity=0.256 Sum_probs=62.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+.... ......+.+|+.++.. ++|||++++++.+..++..|++|||+++ +|.+++..
T Consensus 35 ~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 110 (292)
T cd06657 35 IVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRD-YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH 110 (292)
T ss_pred EEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHh-cCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHhc
Confidence 56777888899999999986432 2345678889999877 5999999999999999999999999999 99988743
No 207
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.00 E-value=5.9e-09 Score=67.21 Aligned_cols=76 Identities=11% Similarity=0.031 Sum_probs=61.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....+|..+|+|.+..... ....+.+..|+.++.. ..|||++++++++.....++++|||+++ +|+.++..
T Consensus 16 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~ 93 (286)
T cd07847 16 VVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQ-LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKN 93 (286)
T ss_pred EEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHh-CCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhC
Confidence 467777888899999999875432 2223557789999887 5999999999999999999999999999 88887653
No 208
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.00 E-value=3.5e-09 Score=69.02 Aligned_cols=67 Identities=13% Similarity=0.244 Sum_probs=56.7
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+.........+++.+|+.++.. ++||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 45 ~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (296)
T cd05095 45 QPVLVAVKMLREDANKNARNDFLKEIKIMSR-LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSR 112 (296)
T ss_pred ceeEEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHh
Confidence 4457899998755444456788999999887 4999999999999999999999999999 99998864
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.00 E-value=6.6e-09 Score=67.57 Aligned_cols=75 Identities=11% Similarity=0.035 Sum_probs=61.6
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....+|+.+|+|.+.... .......+.+|+.+|.. ++|||++.+++++..++..+++|||+++ +|.+++.
T Consensus 15 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 92 (285)
T cd05632 15 EVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEK-VNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIY 92 (285)
T ss_pred EEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHH-cCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHH
Confidence 46778888899999999997532 12234557789999887 5999999999999999999999999999 9987764
No 210
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.00 E-value=4.9e-09 Score=67.39 Aligned_cols=67 Identities=15% Similarity=0.271 Sum_probs=56.2
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+...........+.+|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus 35 ~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~ 102 (277)
T cd05032 35 PETRVAIKTVNENASMRERIEFLNEASVMKE-FNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRS 102 (277)
T ss_pred cceeEEEEecCCccCHHHHHHHHHHHHHHHh-CCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHh
Confidence 3477999998755444455678899999887 5999999999999999999999999998 99998854
No 211
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=98.99 E-value=5.3e-09 Score=67.95 Aligned_cols=66 Identities=15% Similarity=0.279 Sum_probs=54.5
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+..+|+|.+...........+.+|+.++.. .+||||+++++.+..++..+++|||+++ +|.++++.
T Consensus 36 ~~~vavK~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 102 (288)
T cd05061 36 ETRVAVKTVNESASLRERIEFLNEASVMKG-FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRS 102 (288)
T ss_pred ceEEEEEECCCcCCHHHHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHH
Confidence 457999988654433445567889999877 5999999999999999999999999999 99999864
No 212
>KOG4250|consensus
Probab=98.99 E-value=1.8e-10 Score=82.73 Aligned_cols=75 Identities=12% Similarity=0.049 Sum_probs=62.2
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~~ 84 (89)
|+.+.++.||+.+|||.+.........+.-.+|+++|.++ +|||||++++.=.. .....++||||.| ||..+
T Consensus 29 V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~ 107 (732)
T KOG4250|consen 29 VYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKV 107 (732)
T ss_pred eeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccceEEEeecCCCcHHHH
Confidence 6778889999999999998765555577788999999985 79999999876543 3467899999999 99998
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+++
T Consensus 108 L~~ 110 (732)
T KOG4250|consen 108 LNS 110 (732)
T ss_pred hcC
Confidence 864
No 213
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=98.99 E-value=9.1e-09 Score=65.30 Aligned_cols=76 Identities=16% Similarity=0.270 Sum_probs=62.2
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.++++.+..+|..+|+|.+... ......+.+..|+.++.. .+|||++++++.+.. ....|++|||+++ +|.+++.
T Consensus 15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~ 93 (265)
T cd08217 15 TVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRE-LKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQ 93 (265)
T ss_pred EEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHh-cCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHH
Confidence 4677888889999999999754 334456778899999887 599999999998764 4578999999999 9998886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 94 ~ 94 (265)
T cd08217 94 K 94 (265)
T ss_pred H
Confidence 4
No 214
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=98.99 E-value=6.4e-09 Score=67.54 Aligned_cols=65 Identities=18% Similarity=0.355 Sum_probs=55.7
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+.........+.+.+|+.++.. +.||||+++++.+...+..++++||+++ +|.+++..
T Consensus 31 ~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 96 (290)
T cd05045 31 TTVAVKMLKENASSSELRDLLSEFNLLKQ-VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRE 96 (290)
T ss_pred eeEEEEecCCCCCHHHHHHHHHHHHHHhh-CCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHh
Confidence 56888888765555556788999999887 5999999999999999999999999999 99998864
No 215
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=98.99 E-value=3e-09 Score=67.52 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=62.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|..+|+|.+.... +....+.+.+|+.++.. .+|||++++++.+...+..|+++||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 92 (257)
T cd08225 15 KIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAK-MKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINR 92 (257)
T ss_pred eEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHh-CCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHh
Confidence 46777888889999999997532 22345667889999887 5999999999999999999999999999 99888754
No 216
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=98.99 E-value=1.3e-08 Score=67.19 Aligned_cols=74 Identities=11% Similarity=0.252 Sum_probs=59.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
.++++....+|..+|+|.+.... .......+..|++++.. .+|||++++++++...+..|++|||++|++.+++
T Consensus 40 ~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~g~l~~~~ 115 (317)
T cd06635 40 AVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQR-IKHPNSIEYKGCYLREHTAWLVMEYCLGSASDLL 115 (317)
T ss_pred EEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHh-CCCCCEEEEEEEEeeCCeEEEEEeCCCCCHHHHH
Confidence 35677777789999999997532 23345678899999887 5999999999999999999999999998555554
No 217
>KOG0592|consensus
Probab=98.99 E-value=6.7e-10 Score=78.08 Aligned_cols=78 Identities=12% Similarity=0.063 Sum_probs=64.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|.+|....++..||||+++... ......=+.+|-..|..+.+||.|+++|.+|+++..+|.++||+++ +|-++|++
T Consensus 88 tV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K 167 (604)
T KOG0592|consen 88 TVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKK 167 (604)
T ss_pred eEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHH
Confidence 47888899999999999997531 1122333567788888867999999999999999999999999999 99999876
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 168 ~ 168 (604)
T KOG0592|consen 168 Y 168 (604)
T ss_pred h
Confidence 4
No 218
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.99 E-value=7.5e-09 Score=68.59 Aligned_cols=76 Identities=7% Similarity=-0.053 Sum_probs=60.1
Q ss_pred ceeEEE---ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 12 PELGLA---RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~---~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
|+++.. ..+|..+|+|.+.... .....+.+..|+.++..+.+||||+.+++++..++.+|++|||+++ +|.++
T Consensus 16 Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 95 (332)
T cd05614 16 VFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTH 95 (332)
T ss_pred EEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHH
Confidence 555554 3578999999997531 2233556788999998866899999999999999999999999999 99887
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 96 l~~ 98 (332)
T cd05614 96 LYQ 98 (332)
T ss_pred HHH
Confidence 754
No 219
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=98.99 E-value=1e-08 Score=65.77 Aligned_cols=76 Identities=9% Similarity=0.176 Sum_probs=60.4
Q ss_pred cceeEEEcc-CCCEEEEEEEeec---------CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-
Q psy13291 11 KPELGLARL-DPDSEWSFRITFT---------VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT- 79 (89)
Q Consensus 11 ~~~l~~~~~-~~~~~AvK~i~~~---------~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~- 79 (89)
.++.+.... ++..+|+|.+... .......++..|+.++....+|||++++++.+...+..|++|||+++
T Consensus 15 ~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 94 (269)
T cd08528 15 CVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGA 94 (269)
T ss_pred eEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCC
Confidence 356666666 6788999998642 12234566788999887767999999999999999999999999999
Q ss_pred cHHHHHh
Q psy13291 80 SLDKFYT 86 (89)
Q Consensus 80 sL~~~l~ 86 (89)
+|.+++.
T Consensus 95 ~l~~~l~ 101 (269)
T cd08528 95 PLGEHFN 101 (269)
T ss_pred cHHHHHH
Confidence 9988874
No 220
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=98.99 E-value=3.5e-09 Score=69.36 Aligned_cols=75 Identities=12% Similarity=0.216 Sum_probs=61.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+..... ...+.+.+|+.++.. ++|||++++++.+..++..|+++||+++ +|..++..
T Consensus 36 ~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 111 (297)
T cd06659 36 IVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRD-YQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ 111 (297)
T ss_pred eEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHh-CCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHhh
Confidence 356777778899999999975432 235567889999877 5999999999999999999999999999 99887753
No 221
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=98.99 E-value=6.1e-09 Score=67.27 Aligned_cols=75 Identities=15% Similarity=0.291 Sum_probs=60.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE------CCEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR------EGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~------~~~~~iv~E~~~~-sL~~ 83 (89)
.++++.+..++..+|+|.+... ......+..|+.++....+|||++++++++.. .+.+|++|||+++ +|.+
T Consensus 31 ~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~ 108 (282)
T cd06636 31 QVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTD 108 (282)
T ss_pred EEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHH
Confidence 4677888889999999998653 22345677899988886689999999999864 4589999999999 9999
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 109 ~~~~ 112 (282)
T cd06636 109 LVKN 112 (282)
T ss_pred HHHH
Confidence 8864
No 222
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=98.99 E-value=1.7e-09 Score=68.92 Aligned_cols=76 Identities=9% Similarity=0.067 Sum_probs=63.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... .....+.+.+|++++.+ .+||||+++++++..++..++++||+.+ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 93 (258)
T cd05578 15 KVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQE-LNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQ 93 (258)
T ss_pred eEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHh-CCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHh
Confidence 46778877889999999997532 22346778899999887 5999999999999999999999999999 99988864
No 223
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=98.98 E-value=9.6e-09 Score=66.20 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=62.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+++|....+|..+|+|.+..... ......+..|+.++... +|||++++++.+..++.+++++||+ + +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~ 91 (286)
T cd07832 15 IVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRD 91 (286)
T ss_pred EEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHh
Confidence 366777778899999999976432 33456788999998874 8999999999999999999999999 7 99988754
No 224
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=98.98 E-value=5.5e-09 Score=68.26 Aligned_cols=75 Identities=9% Similarity=0.215 Sum_probs=61.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+...... ..+.+..|+.++.. .+|||++++++++...+..|+++||+++ +|.+++.+
T Consensus 34 ~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~-l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 109 (293)
T cd06647 34 TVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRE-NKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE 109 (293)
T ss_pred EEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhh-cCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh
Confidence 4566777778899999998643222 35668889999877 5899999999999999999999999999 99988764
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=98.98 E-value=1e-08 Score=65.61 Aligned_cols=74 Identities=16% Similarity=0.253 Sum_probs=59.6
Q ss_pred ceeEEEccCCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
|+++.. .+|..+|+|.+..... ......+.+|+++|..+ +||||+++++++...+..++++||+++ +|.+++
T Consensus 16 v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l 93 (265)
T cd06631 16 VYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSIL 93 (265)
T ss_pred EEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHH
Confidence 455543 4788999999875321 12345688999998884 999999999999999999999999999 999998
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
.+
T Consensus 94 ~~ 95 (265)
T cd06631 94 NR 95 (265)
T ss_pred Hh
Confidence 65
No 226
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=98.97 E-value=1e-08 Score=65.35 Aligned_cols=76 Identities=16% Similarity=0.198 Sum_probs=64.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+..... ....+.+..|+.++.. .+||||+++++.+...+.+++++||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 92 (264)
T cd06626 15 KVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLEL-LKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEH 92 (264)
T ss_pred EEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHh-CCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhh
Confidence 456677777899999999976533 2457788999999887 5999999999999999999999999999 99998865
No 227
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=98.97 E-value=9.7e-09 Score=65.81 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=57.3
Q ss_pred ceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++..+ ..+..+|+|.+.........+.+.+|+.++.. ++||||+++++.+. .+..|++|||+++ +|.+++..
T Consensus 11 v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~-l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~ 87 (257)
T cd05115 11 VKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQ-LDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSG 87 (257)
T ss_pred EEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHh-cCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHh
Confidence 4555443 34557999999765444456778899999887 59999999999874 4578999999999 99998853
No 228
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=98.97 E-value=7.2e-09 Score=67.35 Aligned_cols=75 Identities=11% Similarity=0.154 Sum_probs=59.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....+|+.+|+|.+..... ......+..|+.++.. ++|||++++++++...+..|++|||+++++.+.+.
T Consensus 17 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 92 (294)
T PLN00009 17 VVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKE-MQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMD 92 (294)
T ss_pred EEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHh-ccCCCEeeEEEEEecCCeEEEEEecccccHHHHHH
Confidence 567788888999999999865322 2234567789999888 49999999999999999999999999876555543
No 229
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=98.97 E-value=1.2e-08 Score=66.27 Aligned_cols=75 Identities=13% Similarity=0.258 Sum_probs=61.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... ....+.+.+|+.++.. .+|||++++++++...+..++++||+++ +|.+++..
T Consensus 34 ~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~-~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 109 (285)
T cd06648 34 IVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRD-YQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH 109 (285)
T ss_pred EEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHH-cCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh
Confidence 35667777789999999986432 2235567889999877 5999999999999999999999999999 99988754
No 230
>KOG4236|consensus
Probab=98.97 E-value=3.6e-09 Score=75.07 Aligned_cols=74 Identities=15% Similarity=0.072 Sum_probs=63.0
Q ss_pred ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
||-+.+|.+|+.||||+|+.. .....-.++..|++||+. .+||.|+.+-..|...+.+|+|||=+.| -|+-+|.
T Consensus 580 VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~-l~HPGiV~le~M~ET~ervFVVMEKl~GDMLEMILS 655 (888)
T KOG4236|consen 580 VYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQN-LHHPGIVNLECMFETPERVFVVMEKLHGDMLEMILS 655 (888)
T ss_pred eecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHh-cCCCCeeEEEEeecCCceEEEEehhhcchHHHHHHH
Confidence 567789999999999999864 233334778999999998 5999999999999999999999999999 6777764
No 231
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=98.97 E-value=1.2e-08 Score=64.41 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=64.4
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... .......+..|++++.. .+|||++++.+.+...+..++++||+++ +|.++++.
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 92 (258)
T cd08215 15 KVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKK-LNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKK 92 (258)
T ss_pred EEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHh-cCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHH
Confidence 56777777789999999998643 23456778899999887 4899999999999999999999999999 99988865
No 232
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.96 E-value=5.8e-09 Score=68.25 Aligned_cols=68 Identities=9% Similarity=0.233 Sum_probs=56.7
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+..+|+|.+.........+++.+|+.++..+.+||||+++++.+...+.+|++|||+++ +|.+++..
T Consensus 46 ~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 114 (304)
T cd05101 46 EAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA 114 (304)
T ss_pred cceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHh
Confidence 345789998875444455678899999987754899999999999999999999999999 99998864
No 233
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=98.96 E-value=3.9e-09 Score=68.99 Aligned_cols=75 Identities=13% Similarity=0.259 Sum_probs=62.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....++..+|+|.+.... ....+.+.+|+.++.. .+|||++++++.+..++..|++|||+++ +|.+++..
T Consensus 37 ~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~-l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 112 (292)
T cd06658 37 IVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRD-YHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVTH 112 (292)
T ss_pred EEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHh-CCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHhc
Confidence 46677777889999999986432 2345668899999877 5999999999999999999999999999 99988743
No 234
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=98.96 E-value=8.4e-09 Score=68.49 Aligned_cols=66 Identities=9% Similarity=0.223 Sum_probs=55.9
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+.........+.+..|+.++.++.+||||+++++.+..++.+++++||+++ +|.+++.+
T Consensus 45 ~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 111 (334)
T cd05100 45 VTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRA 111 (334)
T ss_pred eeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHh
Confidence 3689998875544555678899999988755899999999999999999999999999 99998864
No 235
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=98.96 E-value=7.7e-09 Score=65.45 Aligned_cols=76 Identities=14% Similarity=0.197 Sum_probs=62.5
Q ss_pred ceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++.+..... +..+|+|.+.........+.+..|+.++..+ +|||++++++.+.....++++|||+++ +|.++++.
T Consensus 11 v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 89 (262)
T cd00192 11 VYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRK 89 (262)
T ss_pred EEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEeccCCcHHHHHhh
Confidence 455555544 8889999998654444567888999998885 799999999999999999999999998 99999875
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 90 ~ 90 (262)
T cd00192 90 S 90 (262)
T ss_pred c
Confidence 3
No 236
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=98.96 E-value=1.9e-08 Score=66.35 Aligned_cols=75 Identities=9% Similarity=0.243 Sum_probs=60.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++.+....+|..+|+|.+.... .....+.+..|+.++.. .+|||++++++++...+..|++|||+.+++.+++.
T Consensus 36 ~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~ 112 (313)
T cd06633 36 AVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQ-LKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLE 112 (313)
T ss_pred EEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHh-CCCCCCccEEEEEEeCCEEEEEEecCCCCHHHHHH
Confidence 46777777899999999997532 22345678889999887 59999999999999999999999999886555553
No 237
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=98.96 E-value=6.7e-09 Score=67.72 Aligned_cols=77 Identities=34% Similarity=0.521 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++++....++..+|+|.+...........+..|+.++....+||||+++++++......|++|||+++++.+++..
T Consensus 30 ~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~l~~~ 106 (296)
T cd06618 30 QVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMSTCLDKLLKR 106 (296)
T ss_pred EEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCcCHHHHHHH
Confidence 46777777789999999997654444456677788777776679999999999999999999999998766666543
No 238
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=98.96 E-value=5.2e-09 Score=67.87 Aligned_cols=76 Identities=13% Similarity=0.141 Sum_probs=59.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE-----EEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD-----VWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~-----~~iv~E~~~~sL~~~ 84 (89)
.|+++....+|..+|+|.+...... .....+.+|+.++..+.+||||+++++++...+. .|++|||++++|.++
T Consensus 16 ~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~ 95 (295)
T cd07837 16 KVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKF 95 (295)
T ss_pred EEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHH
Confidence 4778888889999999998754322 2245678899998886578999999999987665 899999999966665
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
+.
T Consensus 96 ~~ 97 (295)
T cd07837 96 MD 97 (295)
T ss_pred HH
Confidence 53
No 239
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.96 E-value=3.8e-09 Score=78.52 Aligned_cols=71 Identities=10% Similarity=0.028 Sum_probs=57.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+.+....+|..||+|.+...... ...|++.+.+ .+||||++++|++..++..|++||||++ +|.++++.
T Consensus 705 ~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~-l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~ 776 (968)
T PLN00113 705 ASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGK-LQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN 776 (968)
T ss_pred eEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhh-CCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc
Confidence 4777877789999999998643221 1235777777 5999999999999999999999999999 99999864
No 240
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=98.95 E-value=1.3e-08 Score=66.09 Aligned_cols=76 Identities=8% Similarity=0.098 Sum_probs=60.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+.|....++..+|+|.+..... ......+.+|+.++..+ .||||+++++++... +..|+++||++++|.+++..
T Consensus 20 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~ 98 (293)
T cd07843 20 VVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMET 98 (293)
T ss_pred EEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEEehhcCcCHHHHHHh
Confidence 467788888899999999975422 22234567899998884 899999999999887 89999999998887777654
No 241
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=98.95 E-value=8.5e-09 Score=66.91 Aligned_cols=67 Identities=16% Similarity=0.231 Sum_probs=57.6
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+..+|+|.+.........+.+..|+.++.. ..|||++++++++...+..+++|||+++ +|.+++..
T Consensus 45 ~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 112 (296)
T cd05051 45 APVLVAVKVLRPDASDNAREDFLKEVKILSR-LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQK 112 (296)
T ss_pred CceeEEEEEecCccCHHHHHHHHHHHHHHHh-cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHh
Confidence 4467899999766555557788999999988 4999999999999999999999999999 99998865
No 242
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=98.95 E-value=9.4e-09 Score=65.47 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=58.8
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+.+. ..|+.+|+|.+..... ..+.+..|+.++.. ..|||++++++.+...+..+++|||+++ +|.++++.
T Consensus 22 v~~~~--~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 93 (256)
T cd05039 22 VMLGD--YRGQKVAVKCLKDDST--AAQAFLAEASVMTT-LRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRS 93 (256)
T ss_pred EEEEE--ecCcEEEEEEeccchh--HHHHHHHHHHHHHh-cCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHh
Confidence 44443 4588999999975433 46778899999887 4999999999999999999999999998 99998864
No 243
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=98.95 E-value=1.2e-08 Score=65.54 Aligned_cols=68 Identities=13% Similarity=0.205 Sum_probs=56.1
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++..+|+|.+.........+.+..|+.++.. ..||||+++++++.. ....+++|||+++ +|.+++..
T Consensus 31 ~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~ 101 (284)
T cd05038 31 NTGEQVAVKSLNHSGEEQHRSDFEREIEILRT-LDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQR 101 (284)
T ss_pred CCceEEEEEEeccccchHHHHHHHHHHHHHHh-CCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHh
Confidence 35788999999765443346778999999887 599999999998877 5589999999999 99998865
No 244
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=98.95 E-value=2e-09 Score=69.46 Aligned_cols=76 Identities=9% Similarity=0.052 Sum_probs=62.3
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
..|+++....+|..+|+|.+...... ...+.+.+|+.++.. .+||||+++++++..++..++++||+++ +++.+..
T Consensus 15 ~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~ 92 (286)
T cd07846 15 GMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQ-LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEK 92 (286)
T ss_pred eEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHh-cCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHh
Confidence 35788888888999999988653222 234567789999887 5999999999999999999999999999 8887764
No 245
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=98.94 E-value=8.3e-09 Score=66.34 Aligned_cols=67 Identities=13% Similarity=0.177 Sum_probs=55.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+...+|+|.+.........+.+.+|+.++.. ++|||++++++.+...+..|++|||+++ +|.+++..
T Consensus 34 ~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 101 (275)
T cd05046 34 GETLVLVKALQKTKDENLQSEFRRELDMFRK-LSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRA 101 (275)
T ss_pred CcceEEEEccCCccchHHHHHHHHHHHHHHh-cCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHh
Confidence 3467899988654444356778999999988 4999999999999888999999999998 99998864
No 246
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=98.94 E-value=8.7e-09 Score=67.28 Aligned_cols=77 Identities=14% Similarity=0.200 Sum_probs=60.9
Q ss_pred cceeEEEccCCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+.+....++. .+|+|.+.........+.+.+|+.++.++.+||||+++++++...+.+|+++||+++ +|.+++..
T Consensus 17 ~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 96 (297)
T cd05089 17 QVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRK 96 (297)
T ss_pred eEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHh
Confidence 355666555554 468888874444445677889999988865899999999999999999999999999 99998864
No 247
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=98.94 E-value=4.1e-09 Score=68.05 Aligned_cols=75 Identities=11% Similarity=0.198 Sum_probs=60.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....+|..+|+|.+..... ......+..|++++.. ++||||+++++++...+..+++|||++++|.+++.
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~~~ 90 (284)
T cd07860 15 VVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE-LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMD 90 (284)
T ss_pred EEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHh-cCCCCCcchhhhcccCCcEEEEeeccccCHHHHHH
Confidence 467788888999999999875332 2234568889999888 49999999999999999999999999777766654
No 248
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=98.94 E-value=5.8e-09 Score=67.29 Aligned_cols=76 Identities=11% Similarity=0.103 Sum_probs=62.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... +....+.+.+|++++.. +.||||+++++.+...+..++++||+++ +++.+.++
T Consensus 16 ~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~ 93 (288)
T cd07833 16 VVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQ-LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEAS 93 (288)
T ss_pred eEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHh-cCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhc
Confidence 46788888899999999987532 23345678899999887 4899999999999999999999999999 77766543
No 249
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=98.93 E-value=1.7e-08 Score=65.28 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=55.5
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..++..+|+|.+...........+.+|+.+|.. ++||||+++++++... ..++++|||+++ +|.+++..
T Consensus 30 ~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 101 (283)
T cd05080 30 DGTGEMVAVKTLKRECGQQNTSGWKKEINILKT-LYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK 101 (283)
T ss_pred CCCCceEEEEEeccccChHHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH
Confidence 346788999999765444445678889999888 5999999999987664 468999999999 99988764
No 250
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=98.93 E-value=7.1e-09 Score=66.11 Aligned_cols=74 Identities=15% Similarity=0.091 Sum_probs=60.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.... +..+|+|.+..... ...+.+..|+.++.. ++||||+++++.+...+..+++|||+++ +|.++++.
T Consensus 21 ~vy~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 95 (261)
T cd05148 21 EVWEGLWKN-RVRVAIKILKSDDL-LKQQDFQKEVQALKR-LRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRS 95 (261)
T ss_pred cEEEeEecC-CCcEEEEeccccch-hhHHHHHHHHHHHhc-CCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhc
Confidence 466777666 78899999875432 235668889999877 5999999999999999999999999999 99998864
No 251
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=98.93 E-value=3e-08 Score=62.68 Aligned_cols=76 Identities=17% Similarity=0.228 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+..... ....+.+..|+.++.++ .|||++++++.+..++.+++++||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 92 (254)
T cd06627 15 VVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKK 92 (254)
T ss_pred EEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHh
Confidence 467777788899999999976432 24567889999998884 999999999999999999999999999 99998764
No 252
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=98.93 E-value=8.2e-09 Score=66.85 Aligned_cols=64 Identities=11% Similarity=0.035 Sum_probs=52.1
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+.... ......+..|..++.. .+||||+++++++..++..|++|||+++ +|+.++++
T Consensus 45 ~~v~~k~~~~~~-~~~~~~~~~~~~~~~~-l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~ 109 (274)
T cd05076 45 LRVVLKVLDPSH-RDIALAFFETASLMSQ-VSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK 109 (274)
T ss_pred eeEEEEecChHH-HHHHHHHHHHHHHHhc-CCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh
Confidence 458888886432 2234567788888766 5999999999999999999999999999 99998864
No 253
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=98.93 E-value=2.7e-08 Score=62.44 Aligned_cols=75 Identities=15% Similarity=0.351 Sum_probs=63.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|..+++|.+..... .....+.+|+.++.. ..|||++++++.+...+..++++||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 90 (253)
T cd05122 15 EVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKK-CKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKS 90 (253)
T ss_pred EEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHh-CCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhh
Confidence 456777777899999999975433 346778899999887 4899999999999999999999999998 99998865
No 254
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=98.92 E-value=7.7e-09 Score=69.11 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=56.3
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-CEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.+++.+|+|.+.........+.+..|+.++.++.+||||+++++++... +.++++|||+++ +|.+++..
T Consensus 35 ~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~ 105 (337)
T cd05054 35 ASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRS 105 (337)
T ss_pred cccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHh
Confidence 3567899999975544445677889999988865899999999988654 579999999999 99998864
No 255
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=98.92 E-value=1.5e-08 Score=64.72 Aligned_cols=73 Identities=18% Similarity=0.224 Sum_probs=57.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++... ++..+|+|.+...... ...+..|+.++.. .+||||+++++.+...+..+++|||+++ +|.+++..
T Consensus 19 ~v~~~~~~-~~~~~~iK~~~~~~~~--~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 92 (256)
T cd05059 19 VVHLGKWR-GKIDVAIKMIREGAMS--EDDFIEEAKVMMK-LSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRE 92 (256)
T ss_pred eEEEeEec-CCccEEEEEeccCCCC--HHHHHHHHHHHHh-CCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHh
Confidence 45666554 4567899988643221 3457789999887 5999999999999999999999999999 99988864
No 256
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=98.92 E-value=2.8e-09 Score=68.82 Aligned_cols=75 Identities=12% Similarity=0.159 Sum_probs=60.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|+++....+|..+|+|.+...... .....+..|+.++.. .+|||++++++++...+.+|+++||++++|.+++.
T Consensus 15 ~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 90 (284)
T cd07839 15 TVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFD 90 (284)
T ss_pred EEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHh-cCCCCeeeHHHHhccCCceEEEEecCCCCHHHHHH
Confidence 5788888889999999999753222 223456789999887 59999999999999999999999999986666554
No 257
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=98.92 E-value=2.4e-08 Score=64.81 Aligned_cols=74 Identities=15% Similarity=0.302 Sum_probs=59.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~ 84 (89)
.++++....++..+|+|.+..... ....+..|+.++..+.+|||++++++++... +..|++|||+++ +|.++
T Consensus 37 ~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~ 114 (291)
T cd06639 37 KVYKVTNKKDGSLAAVKILDPISD--VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTEL 114 (291)
T ss_pred EEEEEEECCCCCEEEEEEeccccc--HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHH
Confidence 467777778899999999864322 2455677888888765899999999998764 368999999999 99988
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
++
T Consensus 115 ~~ 116 (291)
T cd06639 115 VK 116 (291)
T ss_pred HH
Confidence 75
No 258
>KOG0576|consensus
Probab=98.92 E-value=4.3e-11 Score=85.77 Aligned_cols=72 Identities=15% Similarity=0.333 Sum_probs=61.1
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
|+.+....++...|+|.++....+. ...+++|+-++.. ..||||+.|+|+|...+..||+||||.| +|+++.
T Consensus 31 vyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~d-c~h~nivay~gsylr~dklwicMEycgggslQdiy 103 (829)
T KOG0576|consen 31 VYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRD-CRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIY 103 (829)
T ss_pred hhhhcccccCchhhheeeeccCCcc-ccccccceeeeec-CCCcChHHHHhhhhhhcCcEEEEEecCCCccccee
Confidence 4567777899999999999866553 6667778877655 6999999999999999999999999999 998875
No 259
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=98.92 E-value=1.6e-08 Score=64.52 Aligned_cols=72 Identities=18% Similarity=0.247 Sum_probs=56.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++... ++..+|+|.+..... ....+..|+.+|.. .+||||+++++++...+..|++|||+++ +|.+++..
T Consensus 20 vy~~~~~-~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~ 92 (256)
T cd05114 20 VHLGKWR-AQIKVAIKAINEGAM--SEEDFIEEAKVMMK-LSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQ 92 (256)
T ss_pred EEEEEec-cCceEEEEecccCCc--cHHHHHHHHHHHHH-CCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence 4555443 345789998764322 24567889999887 5999999999999999999999999998 99988864
No 260
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=98.92 E-value=3.9e-09 Score=67.60 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=54.5
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+...........+.+|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus 27 ~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~ 92 (269)
T cd05044 27 IRVAVKTLRKGATDQEKKEFLKEAHLMSN-FNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRD 92 (269)
T ss_pred eeehhhhhhcccchhhHHHHHHHHHHHHh-cCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHH
Confidence 67899988654433446678899999877 5999999999999999999999999999 99988864
No 261
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=98.91 E-value=3.8e-08 Score=63.16 Aligned_cols=76 Identities=18% Similarity=0.193 Sum_probs=61.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~-sL~~ 83 (89)
.++++....+|..+|+|.+.... .......+.+|+.++.. ++||||+++++.+.. .+.+++++||+++ +|.+
T Consensus 17 ~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~ 95 (266)
T cd06651 17 RVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKN-LQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKD 95 (266)
T ss_pred EEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHH-cCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHH
Confidence 46788888899999999986432 12335678889999888 499999999998876 3678999999999 9998
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 96 ~l~~ 99 (266)
T cd06651 96 QLKA 99 (266)
T ss_pred HHHH
Confidence 8764
No 262
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=98.91 E-value=1.4e-08 Score=66.10 Aligned_cols=76 Identities=9% Similarity=0.069 Sum_probs=61.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCC----HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN----TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~----~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.++++....+|+.+|+|.+..... ......+..|+.++.. .+||||+++++++..++..+++|||+.++|.+++.
T Consensus 15 ~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~~~~~~lv~e~~~~~L~~~i~ 93 (298)
T cd07841 15 VVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQE-LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIK 93 (298)
T ss_pred EEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhh-cCCCCChhhhheeecCCEEEEEEcccCCCHHHHHh
Confidence 467788888899999999975422 2234556789999887 58999999999999999999999999339999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 94 ~ 94 (298)
T cd07841 94 D 94 (298)
T ss_pred c
Confidence 4
No 263
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=98.91 E-value=2.5e-08 Score=64.48 Aligned_cols=68 Identities=12% Similarity=0.237 Sum_probs=54.9
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHhh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..++..+|+|.+... .....+.+.+|++++.. +.||||+++++++... ..+++++||+++ +|.+++..
T Consensus 30 ~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 100 (284)
T cd05081 30 DNTGEVVAVKKLQHS-TAEHLRDFEREIEILKS-LQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQK 100 (284)
T ss_pred CCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHh-CCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHh
Confidence 346889999998643 33446678899999888 5999999999987653 479999999999 99998864
No 264
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=98.91 E-value=1e-08 Score=69.06 Aligned_cols=75 Identities=12% Similarity=0.087 Sum_probs=60.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~ 84 (89)
.|+++....+|..+|+|.+.... +......+.+|+.+|.. ++||||+++++++..++ .+|+++||+.++|.++
T Consensus 15 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~ 93 (372)
T cd07853 15 VVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCF-FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSDLHKI 93 (372)
T ss_pred EEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHh-CCCCCcCCHhheecCCCccccceEEEEeeccccCHHHH
Confidence 47788888899999999997532 23345678899999887 59999999999998776 8999999998866665
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
+.
T Consensus 94 ~~ 95 (372)
T cd07853 94 IV 95 (372)
T ss_pred Hh
Confidence 53
No 265
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=98.90 E-value=4.4e-08 Score=61.72 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=64.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~l~ 86 (89)
.++.+....++..+++|.+..... ....+.+.+|+.++.+ .+|||++++++.+... +.+++++||+++ +|.+++.
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 93 (260)
T cd06606 15 SVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSS-LQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLK 93 (260)
T ss_pred EEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHH-cCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHH
Confidence 467777778899999999976432 2456778899999888 5899999999999988 899999999998 9999886
Q ss_pred hc
Q psy13291 87 KV 88 (89)
Q Consensus 87 ~~ 88 (89)
..
T Consensus 94 ~~ 95 (260)
T cd06606 94 KF 95 (260)
T ss_pred Hc
Confidence 53
No 266
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=98.90 E-value=2.9e-08 Score=64.08 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=59.5
Q ss_pred cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.++++....+|. .+|+|.+...........+.+|+.++.. .+|||++++++++.. +..++++||+++ +|.+++
T Consensus 22 ~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l 99 (279)
T cd05057 22 TVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMAS-VDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYV 99 (279)
T ss_pred cEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEec-CceEEEEecCCCCcHHHHH
Confidence 356666555554 5899988765445556778899999887 599999999998887 789999999999 999887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 100 ~~ 101 (279)
T cd05057 100 RN 101 (279)
T ss_pred Hh
Confidence 64
No 267
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.90 E-value=2.1e-08 Score=67.20 Aligned_cols=74 Identities=15% Similarity=0.158 Sum_probs=57.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~ 83 (89)
.|+++....+|..+|+|.+.... .......+.+|+.++.. .+||||+++++++...+ .+|++|||+++++.+
T Consensus 36 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 114 (359)
T cd07876 36 IVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQ 114 (359)
T ss_pred EEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHh-CCCCCEeeeeeeeccCCCccccceeEEEEeCCCcCHHH
Confidence 47788888899999999997532 33345677889999877 59999999999987543 589999999985544
Q ss_pred HH
Q psy13291 84 FY 85 (89)
Q Consensus 84 ~l 85 (89)
.+
T Consensus 115 ~~ 116 (359)
T cd07876 115 VI 116 (359)
T ss_pred HH
Confidence 43
No 268
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=98.90 E-value=9.4e-09 Score=65.12 Aligned_cols=76 Identities=13% Similarity=0.100 Sum_probs=63.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+.... .......+..|+.++..+ .||||+++++++...+..|+++||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 92 (256)
T cd08530 15 SVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISK 92 (256)
T ss_pred eEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHH
Confidence 46777778899999999997542 334466778899998874 899999999999999999999999999 99988765
No 269
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=98.90 E-value=2.2e-08 Score=63.56 Aligned_cols=75 Identities=15% Similarity=0.126 Sum_probs=63.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHH-HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQ-EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~-~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++....++..+|+|.+....... .......|+.++.++ .||||+++++.+...+..+++|||+++ +|.+++.
T Consensus 14 ~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~ 90 (260)
T PF00069_consen 14 TVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQ 90 (260)
T ss_dssp EEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHH
T ss_pred EEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-ccccccccccccccccccccccccccccccccccc
Confidence 57889999999999999998654332 233445699998885 999999999999999999999999999 9999886
No 270
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.90 E-value=4.3e-08 Score=62.81 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=60.2
Q ss_pred ceeEEEccCCCEEEEEEEeec----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhc-cHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFT----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~-sL~~~ 84 (89)
++++....+|..+|+|.+... ........+.+|+.++.. ++||||+++++++... +.+++++||+++ +|.++
T Consensus 18 v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 96 (264)
T cd06653 18 VYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKN-LRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQ 96 (264)
T ss_pred EEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHH-cCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHH
Confidence 567777889999999998642 122345678899999888 4999999999998764 468999999999 99988
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 97 ~~~ 99 (264)
T cd06653 97 LKA 99 (264)
T ss_pred HHH
Confidence 754
No 271
>KOG0667|consensus
Probab=98.89 E-value=1.4e-08 Score=72.27 Aligned_cols=76 Identities=9% Similarity=0.037 Sum_probs=64.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-----CceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-----AHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-----pniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
|-.|....|++.||||+++.. .....+...|+.||..+..| -|+|+++++|...++.|||+|+++.+|.++|+
T Consensus 202 Vvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~~NLYellK 279 (586)
T KOG0667|consen 202 VVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLSTNLYELLK 279 (586)
T ss_pred eEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhhhhHHHHHH
Confidence 456778899999999999754 44577788899999986423 49999999999999999999999999999998
Q ss_pred hcC
Q psy13291 87 KVD 89 (89)
Q Consensus 87 ~~~ 89 (89)
.++
T Consensus 280 ~n~ 282 (586)
T KOG0667|consen 280 NNK 282 (586)
T ss_pred hcC
Confidence 753
No 272
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=98.89 E-value=2.3e-08 Score=64.94 Aligned_cols=66 Identities=18% Similarity=0.266 Sum_probs=54.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+... .......+.+|++++.. .+|||++++++++...+.+|+++||+++ +|.+++..
T Consensus 34 ~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 100 (288)
T cd05093 34 DKILVAVKTLKDA-SDNARKDFHREAELLTN-LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRA 100 (288)
T ss_pred cceEEEEEecCCc-CHHHHHHHHHHHHHHHh-CCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHH
Confidence 4456899988643 23446678899999888 4999999999999999999999999999 99988863
No 273
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=98.89 E-value=1.8e-08 Score=64.90 Aligned_cols=65 Identities=11% Similarity=0.125 Sum_probs=52.8
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+++|.+.........+.+.+|+.++.. ++||||+++++.+......+++|||+++ +|.+++++
T Consensus 23 ~~~~~k~~~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 88 (268)
T cd05086 23 ARVVVKELKANASSKEQNEFLQQGDPYRI-LQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQ 88 (268)
T ss_pred ceEEEEEecCCCChHHHHHHHHHHHHHhc-cCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHh
Confidence 34667766644444456788999988776 5999999999999999999999999999 99988864
No 274
>KOG0599|consensus
Probab=98.89 E-value=3.1e-09 Score=70.30 Aligned_cols=74 Identities=11% Similarity=0.085 Sum_probs=61.3
Q ss_pred eeEEEccCCCEEEEEEEeecCCH-------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 13 ELGLARLDPDSEWSFRITFTVNT-------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 13 ~l~~~~~~~~~~AvK~i~~~~~~-------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
..|.++.+|..+|+|+|+..... ...+.-.+|+.||.+..+||+||.+.++|.++..+++|+|+|+. .|-++
T Consensus 34 rRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDy 113 (411)
T KOG0599|consen 34 RRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDY 113 (411)
T ss_pred hhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHH
Confidence 34567789999999999864321 23455678999999988999999999999999999999999998 87777
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
|.
T Consensus 114 Lt 115 (411)
T KOG0599|consen 114 LT 115 (411)
T ss_pred hh
Confidence 74
No 275
>KOG0033|consensus
Probab=98.89 E-value=1.3e-10 Score=75.69 Aligned_cols=74 Identities=8% Similarity=0.141 Sum_probs=60.1
Q ss_pred ceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-c-HHHHHh
Q psy13291 12 PELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-S-LDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-s-L~~~l~ 86 (89)
|+.+.++.||+.+|+|+|+.. ......+.+.+|+.|.. .+.||||+++.+++...+..|+++|+|+| + ..++.+
T Consensus 27 VrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~-~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~ 103 (355)
T KOG0033|consen 27 VRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR-KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA 103 (355)
T ss_pred HHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHH-hcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHH
Confidence 455778899999999999753 22335788999999954 47999999999999999999999999999 5 444443
No 276
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=98.89 E-value=1.8e-08 Score=66.79 Aligned_cols=76 Identities=14% Similarity=0.136 Sum_probs=60.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHH-------------HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecch
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQ-------------EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVM 77 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~-------------~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~ 77 (89)
.|+++....+|..+|+|.+....... ....+.+|+.++.. +.||||+++++++...+..+++|||+
T Consensus 24 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~ 102 (335)
T PTZ00024 24 KVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE-IKHENIMGLVDVYVEGDFINLVMDIM 102 (335)
T ss_pred eEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHh-CCCcceeeeeEEEecCCcEEEEEecc
Confidence 46788888899999999986532111 01246789999887 59999999999999999999999999
Q ss_pred hccHHHHHhh
Q psy13291 78 DTSLDKFYTK 87 (89)
Q Consensus 78 ~~sL~~~l~~ 87 (89)
+++|.+++..
T Consensus 103 ~~~l~~~l~~ 112 (335)
T PTZ00024 103 ASDLKKVVDR 112 (335)
T ss_pred ccCHHHHHHh
Confidence 8877777643
No 277
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=98.89 E-value=3.4e-08 Score=62.77 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=61.0
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++++....++..+|+|.+... ......+.+..|+.++.. .+|||++.+++.+.. .+.++++|||+++ +|.+++..
T Consensus 15 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~ 93 (257)
T cd08223 15 EVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQ-LKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKE 93 (257)
T ss_pred EEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHh-CCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHH
Confidence 4677888888999999999753 233445678889999887 599999999988764 4478999999999 99888754
No 278
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.89 E-value=9.2e-09 Score=65.28 Aligned_cols=70 Identities=10% Similarity=0.012 Sum_probs=55.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+|++|.+..+|+.+|+|.+..... ...|...+.. ..|||++++++.+...+.+|++|||++| +|.+++.+
T Consensus 8 ~v~~~~~~~~~~~~~~K~i~~~~~------~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 8 KVLLVMDTRTQQTFILKGLRKSSE------YSRERLTIIP-HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred eEEEEEEccCCcEEEEEeecchhh------hhhHHHHHHh-cCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 588999999999999999975321 1123333333 4799999999999999999999999999 99888754
No 279
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=98.88 E-value=2e-08 Score=64.55 Aligned_cols=76 Identities=9% Similarity=0.117 Sum_probs=62.0
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++++....+|..+|+|.+.... .......+..|+.++.. .+|||++++++.+... +..++++||++++|.+++..
T Consensus 14 ~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~ 92 (287)
T cd07840 14 QVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQK-LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLDS 92 (287)
T ss_pred EEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHh-ccCCCeeeheeeEecCCCCcEEEEeccccccHHHHHhc
Confidence 46788888889999999998653 23345668889999887 4899999999999888 89999999998877776643
No 280
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.88 E-value=2.5e-08 Score=64.69 Aligned_cols=76 Identities=7% Similarity=-0.059 Sum_probs=59.4
Q ss_pred ceeEEEc---cCCCEEEEEEEeecCC---HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 12 PELGLAR---LDPDSEWSFRITFTVN---TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~~---~~~~~~AvK~i~~~~~---~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
++++... .+|..+|+|.+..... ....+.+..|+.++..+.+||||+.+++++..++.+++++||+++ +|.++
T Consensus 16 v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 95 (290)
T cd05613 16 VFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTH 95 (290)
T ss_pred EEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHH
Confidence 4455443 4789999999975321 123456778999988865899999999999999999999999999 99988
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 96 l~~ 98 (290)
T cd05613 96 LSQ 98 (290)
T ss_pred HHH
Confidence 754
No 281
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=98.88 E-value=5e-08 Score=64.15 Aligned_cols=74 Identities=12% Similarity=0.269 Sum_probs=59.6
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
.++++....++..+|+|.+... ......+++..|+.++.. .+|||++++++++...+..|+++||+.|++.+++
T Consensus 30 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~ 105 (308)
T cd06634 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQK-LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLL 105 (308)
T ss_pred EEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHh-CCCCCcccEEEEEEcCCeeEEEEEccCCCHHHHH
Confidence 3567777788999999998743 233345678889999887 5999999999999999999999999988655554
No 282
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=98.88 E-value=2e-08 Score=64.22 Aligned_cols=72 Identities=17% Similarity=0.222 Sum_probs=55.8
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++++... .+..+|+|.+..... ..+.+.+|+.++.. .+||||+++++++...+.+|++|||+++ +|.+++..
T Consensus 20 vy~~~~~-~~~~~aik~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~ 92 (256)
T cd05113 20 VKYGKWR-GQYDVAIKMIKEGSM--SEDEFIEEAKVMMK-LSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLRE 92 (256)
T ss_pred EEEEEec-CCCcEEEEEcCCCcc--cHHHHHHHHHHHhc-CCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHh
Confidence 4555432 234589998864322 24568889999887 5999999999999988999999999999 99998864
No 283
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.87 E-value=7.2e-09 Score=66.42 Aligned_cols=78 Identities=10% Similarity=0.121 Sum_probs=63.4
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|..+|+|++... ........+..|..++..+.+||||+++++.+...+..+++|||+++ +|.+++++
T Consensus 16 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 95 (280)
T cd05581 16 TVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRK 95 (280)
T ss_pred EEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHH
Confidence 4677778889999999998753 22334567888999988753399999999999999999999999988 99998865
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
.
T Consensus 96 ~ 96 (280)
T cd05581 96 Y 96 (280)
T ss_pred c
Confidence 4
No 284
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=98.87 E-value=3e-08 Score=65.96 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=60.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....+|..+|+|.+.... .....+.+..|+.++.. ..|||++++++++.. .+.+++++||++++|.++++.
T Consensus 25 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~ 102 (328)
T cd07856 25 LVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKH-LRHENIISLSDIFISPLEDIYFVTELLGTDLHRLLTS 102 (328)
T ss_pred EEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHh-cCCCCeeeEeeeEecCCCcEEEEeehhccCHHHHHhc
Confidence 57788888899999999986432 22335667789999887 599999999999876 467999999996688887754
No 285
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=98.87 E-value=1.2e-08 Score=65.87 Aligned_cols=76 Identities=11% Similarity=0.194 Sum_probs=61.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++.+....+|..+|+|.+...... .....+..|+.++.. .+|||++++++++..++..|+++||++++|.+++..
T Consensus 14 ~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~-l~~~~iv~~~~~~~~~~~~~iv~e~~~~~l~~~~~~ 90 (283)
T cd07835 14 VVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKE-LNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDS 90 (283)
T ss_pred EEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHh-cCCCCccCHhheeccCCeEEEEEeccCcCHHHHHhh
Confidence 4677778889999999999754222 223567789999887 599999999999999999999999996688777654
No 286
>PHA03212 serine/threonine kinase US3; Provisional
Probab=98.87 E-value=2.1e-08 Score=68.47 Aligned_cols=68 Identities=9% Similarity=-0.053 Sum_probs=57.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|....+++.+|+|... ...+.+|+.+|.. ++||||++++++|...+..++++|++.++|..++.
T Consensus 107 ~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~-l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~~l~ 174 (391)
T PHA03212 107 FAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRA-INHPSIIQLKGTFTYNKFTCLILPRYKTDLYCYLA 174 (391)
T ss_pred EEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHh-CCCCCCCCEeEEEEECCeeEEEEecCCCCHHHHHH
Confidence 47889999999999999653 2346789999888 59999999999999999999999999877666554
No 287
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=98.86 E-value=5.5e-09 Score=66.85 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=57.1
Q ss_pred cceeEEEccCC-------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 11 KPELGLARLDP-------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~-------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
.|+.+.....+ ..+|+|.+.... ....+.+..|+.++.. .+|||++.+++.+..++..+++|||+++ +|.
T Consensus 10 ~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~-~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~ 87 (258)
T cd05078 10 KIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQ-LSHKHLVLNYGVCVCGDESIMVQEYVKFGSLD 87 (258)
T ss_pred hheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHh-CCCCChhheeeEEEeCCCcEEEEecCCCCcHH
Confidence 35555554433 348888876432 2345667888888777 5999999999999999999999999999 999
Q ss_pred HHHhh
Q psy13291 83 KFYTK 87 (89)
Q Consensus 83 ~~l~~ 87 (89)
++++.
T Consensus 88 ~~l~~ 92 (258)
T cd05078 88 TYLKK 92 (258)
T ss_pred HHHhc
Confidence 99864
No 288
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=98.86 E-value=2.5e-08 Score=63.68 Aligned_cols=73 Identities=16% Similarity=0.196 Sum_probs=58.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.. ..+..+|+|.+... ....+.+..|+.++.. .+||||+++++++...+..+++|||+++ +|.+++..
T Consensus 21 ~v~~~~~-~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 94 (261)
T cd05072 21 EVWMGYY-NNSTKVAVKTLKPG--TMSVQAFLEEANLMKT-LQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKS 94 (261)
T ss_pred eEEEEEe-cCCceEEEEEccCC--chhHHHHHHHHHHHHh-CCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHH
Confidence 3566654 35567899987643 2235678889999887 5999999999999999999999999999 99998854
No 289
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=98.86 E-value=3e-08 Score=64.48 Aligned_cols=66 Identities=18% Similarity=0.221 Sum_probs=53.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+++|.+.... ....+.+.+|+.++.. .+||||+++++.+..++..+++|||+++ +|.+++..
T Consensus 34 ~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 100 (291)
T cd05094 34 DKMLVAVKALKDPT-LAARKDFQREAELLTN-LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA 100 (291)
T ss_pred cceeeEEEecCCcc-HHHHHHHHHHHHHHhc-CCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHh
Confidence 44568888876432 2335678899999887 5999999999999999999999999999 99999864
No 290
>KOG0594|consensus
Probab=98.86 E-value=2e-08 Score=67.21 Aligned_cols=77 Identities=10% Similarity=0.169 Sum_probs=64.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCc-eeeEEeEEEECC------EEEEEecchhccHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAH-TVQFYGAMFREG------DVWICMEVMDTSLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpn-iv~~~~~~~~~~------~~~iv~E~~~~sL~ 82 (89)
.|+.|....+|..||+|.+...... -......+|+.+|.. ++|+| |+.+++.+...+ .+++++||++.+|.
T Consensus 26 ~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~-L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~ 104 (323)
T KOG0594|consen 26 VVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKR-LSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLK 104 (323)
T ss_pred EEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHH-hCCCcceEEEEeeeeecccccccceEEEEEEeecccHH
Confidence 5889999999999999999865432 234567889999988 59999 999999998876 89999999999888
Q ss_pred HHHhhc
Q psy13291 83 KFYTKV 88 (89)
Q Consensus 83 ~~l~~~ 88 (89)
.++...
T Consensus 105 ~ymd~~ 110 (323)
T KOG0594|consen 105 KYMDSL 110 (323)
T ss_pred HHHHhc
Confidence 887653
No 291
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=98.86 E-value=3.2e-08 Score=62.96 Aligned_cols=74 Identities=14% Similarity=0.078 Sum_probs=58.6
Q ss_pred ceeEEEcc-CCC--EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARL-DPD--SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~-~~~--~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+.+.... .+. .+|+|.+.........+.+..|+.++.. ++||||+++++.+.. ..+++++||+++ +|.+++..
T Consensus 11 v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~ 88 (257)
T cd05040 11 VRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHS-LDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRK 88 (257)
T ss_pred EEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhh-cCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHh
Confidence 45555433 333 5899999765443557788999999888 599999999999988 899999999998 99988764
No 292
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=98.86 E-value=2.4e-08 Score=65.27 Aligned_cols=74 Identities=7% Similarity=0.022 Sum_probs=57.9
Q ss_pred cceeEEEcc--CCCEEEEEEEeecC--CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHH
Q psy13291 11 KPELGLARL--DPDSEWSFRITFTV--NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~--~~~~~AvK~i~~~~--~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~ 84 (89)
.|+++.... ++..+|+|.+.... .....+.+.+|+.++.. ++||||+++++.+... +.+|++|||+++++.++
T Consensus 15 ~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~ 93 (316)
T cd07842 15 RVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRE-LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQI 93 (316)
T ss_pred EEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHh-cCCCCccceEEEEeCCCCceEEEEEeCCCcCHHHH
Confidence 356777766 78999999997632 12234567789999887 5999999999999988 78999999999855555
Q ss_pred H
Q psy13291 85 Y 85 (89)
Q Consensus 85 l 85 (89)
+
T Consensus 94 ~ 94 (316)
T cd07842 94 I 94 (316)
T ss_pred H
Confidence 4
No 293
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=98.85 E-value=3.5e-08 Score=63.67 Aligned_cols=72 Identities=10% Similarity=-0.039 Sum_probs=54.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.|+++....++..+|+|.+....... . |+.......+|||++++++++..++..|++|||+++ +|.++++..
T Consensus 31 ~v~~~~~~~~~~~~~~k~~~~~~~~~-~-----e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~ 103 (267)
T PHA03390 31 KVSVLKHKPTQKLFVQKIIKAKNFNA-I-----EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKE 103 (267)
T ss_pred EEEEEEEcCCCcEEEEEEEehhhcch-h-----hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhc
Confidence 46788888899999999987532111 1 222222223799999999999999999999999999 999988653
No 294
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=98.85 E-value=3.2e-08 Score=63.26 Aligned_cols=73 Identities=18% Similarity=0.190 Sum_probs=57.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++... ++..+|+|.+..... ..+.+..|+.++.. ++||||+++++++...+..|++|||+++ +|.++++.
T Consensus 21 ~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 94 (261)
T cd05068 21 EVWEGLWN-NTTPVAVKTLKPGTM--DPKDFLAEAQIMKK-LRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQG 94 (261)
T ss_pred cEEEEEec-CCeEEEEEeeCCCcc--cHHHHHHHHHHHHH-CCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhc
Confidence 45555543 456799999864322 24567889999888 4899999999999999999999999988 99998864
No 295
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=98.85 E-value=5.3e-08 Score=62.11 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=56.9
Q ss_pred ceeEEEccCC---CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDP---DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~---~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|++|....++ ..+|+|.+.........+.+..|+.++.. ..|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus 11 v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~ 88 (257)
T cd05060 11 VVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQ-LDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKK 88 (257)
T ss_pred EEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHh-cCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHh
Confidence 4455444433 78999999765443446678899999887 59999999999765 5578999999999 99998865
No 296
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=98.84 E-value=4.8e-08 Score=62.30 Aligned_cols=72 Identities=18% Similarity=0.168 Sum_probs=57.4
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++... .+..+|+|.+..... ...++..|+.++.. .+|||++++++++......+++|||+++ +|.+++..
T Consensus 22 v~~~~~~-~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~ 94 (261)
T cd05034 22 VWMGTWN-GTTKVAVKTLKPGTM--SPEAFLQEAQIMKK-LRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKS 94 (261)
T ss_pred EEEEEEc-CCceEEEEEecCCcc--CHHHHHHHHHHHhh-CCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhc
Confidence 5555543 456789998874322 24568889999887 5999999999999988999999999999 99988854
No 297
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=98.84 E-value=2e-08 Score=63.75 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=55.9
Q ss_pred cceeEEEccCC----------CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-
Q psy13291 11 KPELGLARLDP----------DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT- 79 (89)
Q Consensus 11 ~~~l~~~~~~~----------~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~- 79 (89)
.|+.+....++ ..+++|.+...... ...+.+|+.++.. .+||||+++++++.. +..+++|||+++
T Consensus 10 ~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~-l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 85 (259)
T cd05037 10 NIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQ-LSHKHLVKLYGVCVR-DENIMVEEYVKFG 85 (259)
T ss_pred eEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHc-CCCcchhheeeEEec-CCcEEEEEcCCCC
Confidence 35566665555 34778876543222 5677889999877 599999999999888 778999999999
Q ss_pred cHHHHHhh
Q psy13291 80 SLDKFYTK 87 (89)
Q Consensus 80 sL~~~l~~ 87 (89)
+|+++++.
T Consensus 86 ~L~~~l~~ 93 (259)
T cd05037 86 PLDVFLHR 93 (259)
T ss_pred cHHHHHHh
Confidence 99998864
No 298
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=98.83 E-value=3.9e-08 Score=63.51 Aligned_cols=75 Identities=11% Similarity=0.043 Sum_probs=59.7
Q ss_pred cceeEEEcc-----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARL-----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~-----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++.... .+..+|+|.+.........+.+..|+.++.. ++||||+++++.+...+..++++||+++ +|.++
T Consensus 20 ~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~-l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~ 98 (283)
T cd05091 20 KVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSR-LQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEF 98 (283)
T ss_pred eEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhc-CCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHH
Confidence 456665443 3578999999755444445678889988776 5999999999999999999999999999 99988
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
+.
T Consensus 99 l~ 100 (283)
T cd05091 99 LV 100 (283)
T ss_pred HH
Confidence 74
No 299
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=98.83 E-value=4.2e-08 Score=62.97 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=56.5
Q ss_pred ceeEEEccC---CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLD---PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~---~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+.+..... ...+|+|...........+.+.+|+.++.. .+||||+++++.+.. +..|++|||+++ +|.+++..
T Consensus 22 v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~-~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~ 99 (270)
T cd05056 22 VYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQ-FDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQV 99 (270)
T ss_pred EEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHh-CCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHh
Confidence 445544332 346899988755445556788999999887 499999999998764 567899999999 99999864
No 300
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=98.83 E-value=5.8e-08 Score=62.86 Aligned_cols=66 Identities=15% Similarity=0.233 Sum_probs=55.3
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++..+|+|.+... .....+.+.+|+.++.. ++||||+++++++...+..|++|||+++ +|.+++..
T Consensus 34 ~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~ 100 (280)
T cd05092 34 DKMLVAVKALKEA-SESARQDFQREAELLTV-LQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRS 100 (280)
T ss_pred CceEEEEEecCcC-CHHHHHHHHHHHHHHhc-CCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHh
Confidence 4567889988643 33456788999999887 5999999999999999999999999999 99998865
No 301
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=98.82 E-value=3.8e-08 Score=64.83 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=57.9
Q ss_pred cceeEEEccCCCE----EEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDS----EWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~----~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+++....+|.. +|+|.+.........+.+..|+.++.. +.||||++++|++... ..++++||+++ +|.+++
T Consensus 22 ~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~g~~~~~-~~~~v~e~~~~g~l~~~l 99 (316)
T cd05108 22 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS-VDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV 99 (316)
T ss_pred eEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEcCC-CceeeeecCCCCCHHHHH
Confidence 4566665555553 899998755444556778899999877 5999999999988764 57789999999 998887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 100 ~~ 101 (316)
T cd05108 100 RE 101 (316)
T ss_pred Hh
Confidence 64
No 302
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=98.82 E-value=2.3e-08 Score=63.22 Aligned_cols=76 Identities=17% Similarity=0.058 Sum_probs=62.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+..... ......+..|+.++.. .+|||++++++.+..++.++++|||+++ +|.+++..
T Consensus 8 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~ 86 (250)
T cd05123 8 KVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSR-INHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK 86 (250)
T ss_pred EEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHH-cCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHh
Confidence 466777777899999999975422 2245678889999877 5899999999999999999999999988 99888764
No 303
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=98.82 E-value=4.2e-08 Score=64.31 Aligned_cols=76 Identities=7% Similarity=0.072 Sum_probs=58.7
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~ 87 (89)
.|+++....+|+.+|+|.+...... .....+.+|+.++.. ++|||++++++++... +.++++|||++++|.+++..
T Consensus 22 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~ 100 (309)
T cd07845 22 IVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLN-LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDN 100 (309)
T ss_pred EEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHh-CCCCCCcceEEEEecCCCCeEEEEEecCCCCHHHHHHh
Confidence 4677888889999999999754222 122345679999887 5999999999998765 57999999998877776654
No 304
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.81 E-value=8.9e-08 Score=62.06 Aligned_cols=76 Identities=11% Similarity=-0.010 Sum_probs=55.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHH---HHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLD---ICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~---il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
.|+++....+++.+|+|.+...... ........|.. ++.. .+||||+.+++++...+..+++|||++| +|.++
T Consensus 9 ~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~ 87 (278)
T cd05606 9 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST-GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYH 87 (278)
T ss_pred EEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh-CCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHH
Confidence 5778888889999999999753211 11112233333 3333 4899999999999999999999999999 99888
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 88 l~~ 90 (278)
T cd05606 88 LSQ 90 (278)
T ss_pred HHh
Confidence 754
No 305
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=98.81 E-value=1.2e-07 Score=61.53 Aligned_cols=77 Identities=10% Similarity=-0.001 Sum_probs=56.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHHHH--hcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDICM--RSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~il~--~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+++....+|..+|+|.+..... .........|..++. ...+|||++.+++.+..++..+++|||+++ +|.+++
T Consensus 9 ~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i 88 (279)
T cd05633 9 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHL 88 (279)
T ss_pred EEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHH
Confidence 467888888999999999975321 111222334443322 224799999999999999999999999999 998887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 89 ~~ 90 (279)
T cd05633 89 SQ 90 (279)
T ss_pred Hh
Confidence 54
No 306
>KOG4721|consensus
Probab=98.81 E-value=6e-09 Score=74.43 Aligned_cols=65 Identities=17% Similarity=0.117 Sum_probs=51.7
Q ss_pred EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
...+..++.||||.+..... .++.=|.+ +.|||||.|.|+|.....++|+||||.. -|..+|+..
T Consensus 141 F~Grl~netVAVKKV~elkE--------TdIKHLRk-LkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~ 206 (904)
T KOG4721|consen 141 FLGRLHNETVAVKKVRELKE--------TDIKHLRK-LKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAG 206 (904)
T ss_pred eeeeccCceehhHHHhhhhh--------hhHHHHHh-ccCcceeeEeeeecCCceeEEeeeccccccHHHHHhcc
Confidence 34466788999998863211 13445566 5999999999999999999999999999 999999864
No 307
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=98.79 E-value=1.6e-08 Score=65.23 Aligned_cols=77 Identities=9% Similarity=0.085 Sum_probs=59.0
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++.|....++..+|+|.+.............+|+..+....+|||++++++.+..++..+++|||++++|.+++..
T Consensus 14 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~ 90 (283)
T cd07830 14 SVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEGNLYQLMKD 90 (283)
T ss_pred EEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecCCCCHHHHHHh
Confidence 36677777789999999987543322233455788888875349999999999999999999999995577776653
No 308
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=98.79 E-value=5.6e-08 Score=65.01 Aligned_cols=74 Identities=15% Similarity=0.167 Sum_probs=57.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+++....++..+|+|.+.... .......+.+|+.++.. .+||||+++++++... ..+|++|||+++++.+
T Consensus 32 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 110 (355)
T cd07874 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQ 110 (355)
T ss_pred EEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHH-hCCCchhceeeeeeccccccccceeEEEhhhhcccHHH
Confidence 46777788899999999997532 33345678889999877 5999999999988654 3589999999985554
Q ss_pred HH
Q psy13291 84 FY 85 (89)
Q Consensus 84 ~l 85 (89)
.+
T Consensus 111 ~~ 112 (355)
T cd07874 111 VI 112 (355)
T ss_pred HH
Confidence 44
No 309
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=98.79 E-value=5e-08 Score=63.49 Aligned_cols=75 Identities=8% Similarity=0.045 Sum_probs=57.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC----------EEEEEecchhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG----------DVWICMEVMDT 79 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~----------~~~iv~E~~~~ 79 (89)
.|+++....+|..+|+|.+..... ......+..|+.++.. ++|||++++++.+...+ .+++++||+++
T Consensus 22 ~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~ 100 (302)
T cd07864 22 QVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQ-LNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH 100 (302)
T ss_pred EEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHh-CCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc
Confidence 467888888999999999975422 2233566789999877 59999999999887654 89999999999
Q ss_pred cHHHHHh
Q psy13291 80 SLDKFYT 86 (89)
Q Consensus 80 sL~~~l~ 86 (89)
++..++.
T Consensus 101 ~l~~~l~ 107 (302)
T cd07864 101 DLMGLLE 107 (302)
T ss_pred cHHHHHh
Confidence 5544443
No 310
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=98.79 E-value=6.1e-08 Score=64.37 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=59.4
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--CEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--GDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++++....+|..+|+|.+... ........+..|+.++.++.+||||+++++++... ..+|++|||++++|..+++.
T Consensus 22 ~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~ 101 (337)
T cd07852 22 IVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRA 101 (337)
T ss_pred eEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccccCHHHHHhc
Confidence 4677777888999999998643 22233456778999988744999999999998764 37899999998877776653
No 311
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=98.78 E-value=6.8e-08 Score=64.65 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=58.3
Q ss_pred cceeEEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+++....+|..+|+|.+... .+......+.+|+.++.. .+||||+++++++... ..+|++|||++++|.+
T Consensus 31 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 109 (353)
T cd07850 31 IVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKL-VNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQ 109 (353)
T ss_pred EEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHh-cCCCCCcceeeeeccCCCccccCcEEEEEeccCCCHHH
Confidence 4677888889999999998653 233345667889999877 5999999999988654 3579999999886666
Q ss_pred HHh
Q psy13291 84 FYT 86 (89)
Q Consensus 84 ~l~ 86 (89)
.+.
T Consensus 110 ~~~ 112 (353)
T cd07850 110 VIQ 112 (353)
T ss_pred HHh
Confidence 543
No 312
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=98.78 E-value=6.1e-08 Score=65.09 Aligned_cols=74 Identities=16% Similarity=0.172 Sum_probs=57.4
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+.+....+++.+|+|.+.... +......+.+|+.++.. .+||||+++++++... ..+|++|||++++|.+
T Consensus 39 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 117 (364)
T cd07875 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC-VNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117 (364)
T ss_pred EEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHh-cCCCCccccceeecccccccccCeEEEEEeCCCCCHHH
Confidence 46777888899999999997532 23345678889999877 5999999999987653 3689999999986655
Q ss_pred HH
Q psy13291 84 FY 85 (89)
Q Consensus 84 ~l 85 (89)
++
T Consensus 118 ~~ 119 (364)
T cd07875 118 VI 119 (364)
T ss_pred HH
Confidence 54
No 313
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=98.78 E-value=5.9e-08 Score=62.75 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=56.5
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEE-----CCEEEEEecchhccHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFR-----EGDVWICMEVMDTSLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL~ 82 (89)
.|++|....+|+.+|+|.+..... .........|+.++..+ .+||||+++++++.. ...+++++||++++|.
T Consensus 15 ~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~ 94 (288)
T cd07863 15 TVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLR 94 (288)
T ss_pred EEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHH
Confidence 478888889999999999975321 11223455677776653 379999999998865 2468999999998777
Q ss_pred HHHhh
Q psy13291 83 KFYTK 87 (89)
Q Consensus 83 ~~l~~ 87 (89)
+++..
T Consensus 95 ~~~~~ 99 (288)
T cd07863 95 TYLDK 99 (288)
T ss_pred HHHHh
Confidence 66654
No 314
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=98.78 E-value=9.3e-08 Score=61.05 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=57.5
Q ss_pred cceeEEE--ccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLA--RLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~--~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.|+++.. ..++..+|+|.+.... +....+.+..|+.++.. .+||||+++++.+. .+..+++|||+++ +|.+++.
T Consensus 10 ~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~ 87 (257)
T cd05116 10 TVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQ-LDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQ 87 (257)
T ss_pred ceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHh-CCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHH
Confidence 3556543 4567889999987543 23345678899999887 59999999998764 4567899999999 9998886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 88 ~ 88 (257)
T cd05116 88 K 88 (257)
T ss_pred h
Confidence 4
No 315
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=98.78 E-value=7.4e-08 Score=62.73 Aligned_cols=75 Identities=7% Similarity=0.019 Sum_probs=57.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--------EEEEEecchhccH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--------DVWICMEVMDTSL 81 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--------~~~iv~E~~~~sL 81 (89)
.|+++....++..+|+|.+..... ......+.+|+.++.. +.||||+++++.+...+ ..+++|||+.++|
T Consensus 27 ~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l 105 (310)
T cd07865 27 EVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDL 105 (310)
T ss_pred EEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHh-CCCCCccceEEEEecccccccCCCceEEEEEcCCCcCH
Confidence 577888888999999999875322 2223455679999887 59999999999887643 4699999998876
Q ss_pred HHHHh
Q psy13291 82 DKFYT 86 (89)
Q Consensus 82 ~~~l~ 86 (89)
.+++.
T Consensus 106 ~~~l~ 110 (310)
T cd07865 106 AGLLS 110 (310)
T ss_pred HHHHH
Confidence 66654
No 316
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=98.77 E-value=6.9e-08 Score=61.58 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=56.7
Q ss_pred ceeEEEcc---CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHh
Q psy13291 12 PELGLARL---DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~---~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~ 86 (89)
|+.|.... .+..+|+|.+.........+.+..|+.++.. .+|||++++++.+.. ++..+++|||+.+ +|.+++.
T Consensus 11 v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~ 89 (262)
T cd05058 11 VYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKD-FSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIR 89 (262)
T ss_pred EEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHcc-CCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHH
Confidence 45555432 3457999988654444456778889998776 599999999997754 5578999999999 9999886
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
+
T Consensus 90 ~ 90 (262)
T cd05058 90 S 90 (262)
T ss_pred h
Confidence 4
No 317
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=98.77 E-value=1e-07 Score=60.57 Aligned_cols=72 Identities=17% Similarity=0.256 Sum_probs=56.8
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
++++.. .++..+|+|.+...... ...+..|+.++.. .+|||++++++++...+..++++||+++ +|.+++..
T Consensus 20 v~~~~~-~~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 92 (256)
T cd05112 20 VWLGYW-LEKRKVAIKTIREGAMS--EEDFIEEAQVMMK-LSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRA 92 (256)
T ss_pred EEEEEE-eCCCeEEEEECCCCCCC--HHHHHHHHHHHHh-CCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHh
Confidence 455544 24678999988643222 3457789999888 5999999999999999999999999999 99988754
No 318
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=98.77 E-value=5.6e-08 Score=64.58 Aligned_cols=75 Identities=17% Similarity=0.118 Sum_probs=58.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~l 85 (89)
.|+++....+|..||+|.+...........+..|+.++.. ++||||+++++.+... ..+|+++||+++++.+++
T Consensus 20 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~ 98 (336)
T cd07849 20 MVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRR-FKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLI 98 (336)
T ss_pred EEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHh-CCCCCcCchhheeecccccccceEEEEehhcccCHHHHH
Confidence 4677888889999999999743333445677889999887 4899999999877654 368999999988666655
Q ss_pred h
Q psy13291 86 T 86 (89)
Q Consensus 86 ~ 86 (89)
.
T Consensus 99 ~ 99 (336)
T cd07849 99 K 99 (336)
T ss_pred h
Confidence 4
No 319
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=98.77 E-value=1.1e-07 Score=61.39 Aligned_cols=75 Identities=8% Similarity=0.044 Sum_probs=59.6
Q ss_pred ceeEEEcc----CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHH
Q psy13291 12 PELGLARL----DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~----~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l 85 (89)
|+.+.... ++..+|+|.+.........+.+.+|+.++.. ++|||++++++++.. +...++++||+++ +|.+++
T Consensus 22 V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l 100 (280)
T cd05043 22 IFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYG-LSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFL 100 (280)
T ss_pred EEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHH
Confidence 55555544 3577999988755555567788899999887 499999999998766 5689999999998 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 101 ~~ 102 (280)
T cd05043 101 QQ 102 (280)
T ss_pred Hh
Confidence 65
No 320
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.76 E-value=5.9e-08 Score=60.42 Aligned_cols=76 Identities=18% Similarity=0.203 Sum_probs=63.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....+|..+|+|.+.........+.+..|+..+... +|||++++++.+......++++||+++ +|.+++..
T Consensus 4 ~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 4 KVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred EEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 35677777889999999997543322267888999998875 999999999999999999999999999 99998764
No 321
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=98.75 E-value=1.3e-07 Score=66.58 Aligned_cols=76 Identities=7% Similarity=0.013 Sum_probs=60.5
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--------EEEEEecchhc-c
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--------DVWICMEVMDT-S 80 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--------~~~iv~E~~~~-s 80 (89)
.|+++....+|+.+|+|.+.... +......+..|+.++.. .+|+|++++++.+...+ .++++|||+++ +
T Consensus 47 ~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~-~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gs 125 (496)
T PTZ00283 47 TVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLN-CDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGD 125 (496)
T ss_pred EEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhc-CCCCcEEEeecceecccccCcccceEEEEEEeCCCCCc
Confidence 36778888899999999997643 34456678899999877 59999999988775432 47899999999 9
Q ss_pred HHHHHhh
Q psy13291 81 LDKFYTK 87 (89)
Q Consensus 81 L~~~l~~ 87 (89)
|.+++..
T Consensus 126 L~~~l~~ 132 (496)
T PTZ00283 126 LRQEIKS 132 (496)
T ss_pred HHHHHHH
Confidence 9988753
No 322
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=98.75 E-value=1.5e-07 Score=60.19 Aligned_cols=74 Identities=12% Similarity=0.154 Sum_probs=56.3
Q ss_pred ceeEEEcc---CCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE------EEEEecchhc-c
Q psy13291 12 PELGLARL---DPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD------VWICMEVMDT-S 80 (89)
Q Consensus 12 ~~l~~~~~---~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~------~~iv~E~~~~-s 80 (89)
|+.+.... ++..+|+|.+.... .......+.+|+.++.. .+||||+++++.+...+. .++++||+++ +
T Consensus 15 v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~ 93 (273)
T cd05035 15 VMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKD-FDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGD 93 (273)
T ss_pred EEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHh-CCCCCeeeEEeeeccCCccccCcccEEEEeccCCCC
Confidence 44554433 44789999997543 33446678899999887 599999999998876543 8999999999 9
Q ss_pred HHHHHh
Q psy13291 81 LDKFYT 86 (89)
Q Consensus 81 L~~~l~ 86 (89)
|..++.
T Consensus 94 l~~~l~ 99 (273)
T cd05035 94 LHSFLL 99 (273)
T ss_pred HHHHHH
Confidence 988874
No 323
>KOG4645|consensus
Probab=98.75 E-value=1e-09 Score=83.10 Aligned_cols=77 Identities=16% Similarity=0.171 Sum_probs=65.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
+|+.|.+..+|...|+|.|...... ......-.|..+|.. ++|||++++||+=.+.+.++|+||||+| +|.++++.+
T Consensus 1250 ~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~-lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~g 1328 (1509)
T KOG4645|consen 1250 KVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEG-LNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHG 1328 (1509)
T ss_pred eeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHh-ccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhc
Confidence 6899999999999999999764322 223456678889877 5999999999999999999999999999 999998764
No 324
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=98.74 E-value=1.3e-07 Score=61.32 Aligned_cols=77 Identities=10% Similarity=0.058 Sum_probs=55.0
Q ss_pred cceeEEEcc-CCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEE-----CCEEEEEecchhccH
Q psy13291 11 KPELGLARL-DPDSEWSFRITFTVN-TQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFR-----EGDVWICMEVMDTSL 81 (89)
Q Consensus 11 ~~~l~~~~~-~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~-----~~~~~iv~E~~~~sL 81 (89)
.|++|.+.. +|..+|+|.+..... ......+.+|+.++..+ ..||||+++++++.. ...++++|||++++|
T Consensus 16 ~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l 95 (290)
T cd07862 16 KVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDL 95 (290)
T ss_pred EEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCH
Confidence 467787754 468899999975432 22234456677776653 279999999998863 357999999998877
Q ss_pred HHHHhh
Q psy13291 82 DKFYTK 87 (89)
Q Consensus 82 ~~~l~~ 87 (89)
.+++..
T Consensus 96 ~~~~~~ 101 (290)
T cd07862 96 TTYLDK 101 (290)
T ss_pred HHHHHh
Confidence 777653
No 325
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=98.74 E-value=8.5e-08 Score=61.54 Aligned_cols=72 Identities=17% Similarity=0.166 Sum_probs=54.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++....+ ..+|+|.+...... .+.+.+|++++.. .+||||+++++.+ .++..|++|||+++ +|.+++..
T Consensus 21 ~v~~~~~~~~-~~valK~~~~~~~~--~~~~~~E~~~l~~-l~~~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~ 93 (262)
T cd05071 21 EVWMGTWNGT-TRVAIKTLKPGTMS--PEAFLQEAQVMKK-LRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFLKG 93 (262)
T ss_pred cEEEEEecCC-ceEEEEecccCccC--HHHHHHHHHHHHh-CCCCCcceEEEEE-CCCCcEEEEEcCCCCcHHHHHhh
Confidence 3566655444 45899998753222 3467889999887 5999999999876 45668999999999 99998864
No 326
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=98.74 E-value=2.3e-08 Score=64.24 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=63.2
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
.++++....+++.+|+|.+.... .....+.+..|+.++.. ..|||++++++.+...+..++++||++++|.+++.+.
T Consensus 14 ~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~i~~~ 91 (282)
T cd07829 14 VVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKE-LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKR 91 (282)
T ss_pred eEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHh-cCCCCHHHHHhhhhcCCceEEEecCcCcCHHHHHHhh
Confidence 46778888889999999997643 23335667789999887 4899999999999999999999999988888887653
No 327
>KOG0662|consensus
Probab=98.73 E-value=2.2e-08 Score=63.11 Aligned_cols=76 Identities=11% Similarity=0.126 Sum_probs=62.5
Q ss_pred ceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
|..+.++.++++||+|.+....++ ......++|+-+|.. +.|.||+++++...++..+-+++|||+.+|..+...+
T Consensus 18 vfkarn~~t~eivalkrvrlddddegvpssalreicllke-lkhknivrl~dvlhsdkkltlvfe~cdqdlkkyfdsl 94 (292)
T KOG0662|consen 18 VFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKE-LKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSL 94 (292)
T ss_pred eEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHH-hhhcceeehhhhhccCceeEEeHHHhhHHHHHHHHhc
Confidence 456778889999999999865333 234678899999887 5999999999999999999999999998877776543
No 328
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=98.73 E-value=5e-08 Score=62.68 Aligned_cols=76 Identities=16% Similarity=0.237 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.++.+....+|..+|+|.+...... .....+..|+.++..+ .|||++++++.+..++.+++++||+++++.+++..
T Consensus 14 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~l~~~l~~ 90 (283)
T cd05118 14 VVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKD 90 (283)
T ss_pred eEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEeccCCCHHHHHHh
Confidence 4677777788999999998754322 3356778899998874 89999999999999999999999998866666544
No 329
>KOG1027|consensus
Probab=98.72 E-value=1.9e-08 Score=73.62 Aligned_cols=66 Identities=11% Similarity=0.166 Sum_probs=57.0
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
...|+.||||.+- .+......+|+.+|+..-.|||||++|+.=.++...||++|+|..||++++..
T Consensus 530 ~ye~R~VAVKrll----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~sL~dlie~ 595 (903)
T KOG1027|consen 530 VYEGREVAVKRLL----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACSLQDLIES 595 (903)
T ss_pred eeCCceehHHHHh----hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhhHHHHHhc
Confidence 3477889999774 23455678999999988899999999999999999999999999999999875
No 330
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=98.72 E-value=8.3e-08 Score=61.74 Aligned_cols=65 Identities=14% Similarity=0.150 Sum_probs=51.7
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
...+|+|.+.... ......+..|+.++.. .+||||+++++++......+++|||+++ +|+.++.+
T Consensus 32 ~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~-l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~ 97 (262)
T cd05077 32 EIKVILKVLDPSH-RDISLAFFETASMMRQ-VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHR 97 (262)
T ss_pred ceeEEEeecChhh-hhHHHHHHHHHHHHHh-CCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHh
Confidence 3458888876432 2335567788888877 5999999999999998999999999999 99888754
No 331
>PRK10345 hypothetical protein; Provisional
Probab=98.72 E-value=1.7e-07 Score=59.58 Aligned_cols=69 Identities=13% Similarity=0.143 Sum_probs=51.8
Q ss_pred EccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcC----CCCceeeEEeEEEECC---E-EEEEecc--hhc-cHHHHH
Q psy13291 17 ARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSS----DCAHTVQFYGAMFREG---D-VWICMEV--MDT-SLDKFY 85 (89)
Q Consensus 17 ~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~----~hpniv~~~~~~~~~~---~-~~iv~E~--~~~-sL~~~l 85 (89)
++.++.. +||++..... ...+.+.+|+.++..+. .||||++++|++.++. . +++++|| +++ +|.+++
T Consensus 21 hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l 98 (210)
T PRK10345 21 HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFA 98 (210)
T ss_pred CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHH
Confidence 6666665 6998865322 23567899999988752 5899999999998863 4 4588999 557 999998
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
++
T Consensus 99 ~~ 100 (210)
T PRK10345 99 EQ 100 (210)
T ss_pred Hc
Confidence 75
No 332
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=98.71 E-value=1.9e-07 Score=59.68 Aligned_cols=71 Identities=14% Similarity=0.191 Sum_probs=54.7
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|++|.. .++..+|+|.+...... .+.+.+|+.++.. .+|||++++++.+ ..+.++++|||+++ +|.+++..
T Consensus 22 v~~~~~-~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~-l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~~~~~~ 93 (260)
T cd05067 22 VWMGYY-NGHTKVAIKSLKQGSMS--PEAFLAEANLMKQ-LQHPRLVRLYAVV-TQEPIYIITEYMENGSLVDFLKT 93 (260)
T ss_pred EEeeec-CCCceEEEEEecCCCCc--HHHHHHHHHHHHh-cCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHHHHHHh
Confidence 455553 45678999998754322 4568889999887 5999999999876 45679999999999 99988754
No 333
>PTZ00036 glycogen synthase kinase; Provisional
Probab=98.71 E-value=1.4e-07 Score=65.31 Aligned_cols=70 Identities=9% Similarity=-0.004 Sum_probs=53.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEEecchhccHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWICMEVMDTSLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv~E~~~~sL~ 82 (89)
.|++|....+++.+|+|.+..... ...+|+.+|.. ++||||+++++++... ..++++|||+++++.
T Consensus 81 ~Vy~~~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~-l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~ 154 (440)
T PTZ00036 81 VVYEAICIDTSEKVAIKKVLQDPQ-----YKNRELLIMKN-LNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVH 154 (440)
T ss_pred EEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHh-cCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHH
Confidence 477888888999999998864321 23468999887 5999999998877542 257899999999665
Q ss_pred HHHh
Q psy13291 83 KFYT 86 (89)
Q Consensus 83 ~~l~ 86 (89)
+++.
T Consensus 155 ~~~~ 158 (440)
T PTZ00036 155 KYMK 158 (440)
T ss_pred HHHH
Confidence 5543
No 334
>KOG4257|consensus
Probab=98.71 E-value=4.8e-08 Score=70.53 Aligned_cols=65 Identities=15% Similarity=0.282 Sum_probs=54.7
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.-||||.-+.+.+.+..+.|+.|..+|.. ++|||||++.|.+.. ..+||+||+++- .|..+|+..
T Consensus 419 iaVAvKtCK~d~t~d~tekflqEa~iMrn-fdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~n 484 (974)
T KOG4257|consen 419 IAVAVKTCKTDCTPDDTEKFLQEASIMRN-FDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQN 484 (974)
T ss_pred eeeeeehhccCCChhhHHHHHHHHHHHHh-CCCcchhheeeeeec-cceeEEEecccchhHHHHHHhc
Confidence 34788887766666668999999999777 699999999999875 479999999998 999999864
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=98.70 E-value=1.2e-07 Score=61.50 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=58.9
Q ss_pred ceeEEEc---cCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 12 PELGLAR---LDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 12 ~~l~~~~---~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
|+++... .++..+|+|.+.... .....+.+..|+.++....+||||+.+++++...+..+++|||+++ +|.++
T Consensus 16 vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 95 (288)
T cd05583 16 VFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTH 95 (288)
T ss_pred EEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHH
Confidence 4444432 467889999987432 1223456788999998866899999999999999999999999999 99887
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 96 ~~~ 98 (288)
T cd05583 96 LYQ 98 (288)
T ss_pred Hhh
Confidence 754
No 336
>KOG0200|consensus
Probab=98.70 E-value=5.5e-08 Score=69.99 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=61.2
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
...||||.+.......+.+.+..|+.+|.....||||+.+.|++...+.+++++||+.. +|.++++..
T Consensus 328 ~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~ 396 (609)
T KOG0200|consen 328 YVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKK 396 (609)
T ss_pred eEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhc
Confidence 45699999987666677889999999999988999999999999999999999999999 999999864
No 337
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=98.70 E-value=2.6e-07 Score=59.46 Aligned_cols=77 Identities=8% Similarity=0.032 Sum_probs=58.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhc--CCCCceeeEEeEEEECCE-----EEEEecchhccHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRS--SDCAHTVQFYGAMFREGD-----VWICMEVMDTSLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~~~~-----~~iv~E~~~~sL~ 82 (89)
.++++....++..+|+|.+...... .....+..|+.++..+ ..|||++++++++...+. ++++|||++++|.
T Consensus 14 ~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~ 93 (287)
T cd07838 14 TVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLA 93 (287)
T ss_pred EEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHH
Confidence 4677888788999999999753322 2234566788776653 269999999999988776 9999999988776
Q ss_pred HHHhh
Q psy13291 83 KFYTK 87 (89)
Q Consensus 83 ~~l~~ 87 (89)
+++..
T Consensus 94 ~~l~~ 98 (287)
T cd07838 94 TYLSK 98 (287)
T ss_pred HHHHH
Confidence 66654
No 338
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.70 E-value=4.5e-07 Score=54.93 Aligned_cols=77 Identities=17% Similarity=0.213 Sum_probs=63.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.++.+....+|..+++|...........+.+.+|+..+.. ..|++++++++.+...+..++++||+++ +|.+++...
T Consensus 8 ~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~-l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~ 85 (215)
T cd00180 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKK-LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN 85 (215)
T ss_pred EEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHh-cCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhc
Confidence 4566666667999999999754332235678899999887 5899999999999999999999999998 999988653
No 339
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=98.69 E-value=5.7e-08 Score=64.50 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=58.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~sL~~~l 85 (89)
.|+++....+|..+|+|.+..... ......+..|+.+|.. ++||||+++++++.. ...++++|||+.++|.+++
T Consensus 20 ~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~ 98 (334)
T cd07855 20 VVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRH-FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII 98 (334)
T ss_pred EEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHh-cCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHh
Confidence 467788888999999999975422 2335667789999887 489999999988764 3579999999987777776
Q ss_pred h
Q psy13291 86 T 86 (89)
Q Consensus 86 ~ 86 (89)
.
T Consensus 99 ~ 99 (334)
T cd07855 99 H 99 (334)
T ss_pred c
Confidence 4
No 340
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=98.68 E-value=3.2e-07 Score=56.80 Aligned_cols=76 Identities=14% Similarity=0.196 Sum_probs=63.2
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.+....++..+|+|.+.........+.+..|+..+... .|+|++++++.+...+..++++||+++ +|.+++..
T Consensus 14 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~ 90 (225)
T smart00221 14 KVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRK 90 (225)
T ss_pred EEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEeccCCCCHHHHHHh
Confidence 35677777788999999997543322467888899998875 999999999999999999999999999 99998864
No 341
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.68 E-value=2.3e-07 Score=62.04 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=58.8
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~ 83 (89)
.|+++....+|..+|+|.+.... .......+.+|+.+|.. .+||||+++++++...+ ..+++|||+.++|.+
T Consensus 30 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 108 (343)
T cd07880 30 TVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH-MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGK 108 (343)
T ss_pred EEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHh-cCCCCccceeeeecCCccccccceEEEEEecCCCCHHH
Confidence 46778888899999999986432 22334568899999887 59999999999987643 469999999448887
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 109 ~~~~ 112 (343)
T cd07880 109 LMKH 112 (343)
T ss_pred HHhc
Confidence 7653
No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=98.67 E-value=7.7e-08 Score=63.50 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=61.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~ 84 (89)
.+++|....+|..+|+|.+..... ....+.+..|+.++.. ++||||+++++.+...+ .+|++|||++++|.++
T Consensus 15 ~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~ 93 (330)
T cd07834 15 VVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRH-LRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKV 93 (330)
T ss_pred EEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHh-cCCcchhhhhhhhcccCcccccceEEEecchhhhHHHH
Confidence 467788778899999999975432 3345678899999887 58999999999988765 8999999999877777
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 94 l~~ 96 (330)
T cd07834 94 IKS 96 (330)
T ss_pred HhC
Confidence 654
No 343
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=98.67 E-value=9.4e-08 Score=63.61 Aligned_cols=76 Identities=7% Similarity=0.082 Sum_probs=59.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+++....++..+|+|.+..... ......+.+|+.+|.. ++||||+++++++... ...|+++|++.++|.+
T Consensus 30 ~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 108 (343)
T cd07878 30 SVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKH-MKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNN 108 (343)
T ss_pred EEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHh-cCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHH
Confidence 477888888999999999975322 2334567789999888 5999999999887643 4689999998668888
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
+++.
T Consensus 109 ~~~~ 112 (343)
T cd07878 109 IVKC 112 (343)
T ss_pred HHhc
Confidence 7653
No 344
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.66 E-value=2e-07 Score=65.23 Aligned_cols=68 Identities=6% Similarity=-0.099 Sum_probs=55.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|+++.+..+++.+|+|... ...+.+|+.+|.. ++||||+++++++...+..+++||++.++|.+++.
T Consensus 184 ~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~-L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~~l~ 251 (461)
T PHA03211 184 CVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRR-LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLG 251 (461)
T ss_pred EEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHH-CCCCCCCcEEEEEEECCEEEEEEEccCCCHHHHHH
Confidence 47888888899999999643 2235679999888 59999999999999999999999999876666554
No 345
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=98.65 E-value=2e-07 Score=59.60 Aligned_cols=72 Identities=11% Similarity=0.090 Sum_probs=55.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+++.. ..+..+|+|.+... ....+.+.+|+.++.. .+|||++++++.+.. ...+++|||+++ +|.+++.+
T Consensus 21 ~vy~~~~-~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~ 93 (260)
T cd05073 21 EVWMATY-NKHTKVAVKTMKPG--SMSVEAFLAEANVMKT-LQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKS 93 (260)
T ss_pred EEEEEEe-cCCccEEEEecCCC--hhHHHHHHHHHHHHHh-cCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHh
Confidence 4566643 34456899987632 2335678889999887 599999999998877 788999999999 99998865
No 346
>KOG0199|consensus
Probab=98.65 E-value=3.5e-08 Score=71.84 Aligned_cols=63 Identities=13% Similarity=0.125 Sum_probs=53.9
Q ss_pred EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.||||.+..........+|++|+.+|.+ +.|||+|++||.... ..+.+|+|++++ ||.+-|++
T Consensus 140 ~VAVKclr~d~l~~~mddflrEas~M~~-L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrk 203 (1039)
T KOG0199|consen 140 NVAVKCLRDDSLNAIMDDFLREASHMLK-LQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRK 203 (1039)
T ss_pred eEEEEeccCCccchhHHHHHHHHHHHHh-ccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhh
Confidence 4999999765444468899999999988 599999999999998 678999999999 88877765
No 347
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=98.65 E-value=2.9e-07 Score=60.47 Aligned_cols=72 Identities=8% Similarity=0.062 Sum_probs=54.7
Q ss_pred cceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|... .++..+|+|.+..... ...+.+|+.+|.. ++||||+++++.+.. +..+|+++||++++|.+++.
T Consensus 16 ~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 91 (317)
T cd07868 16 HVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRE-LKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIK 91 (317)
T ss_pred EEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHh-cCCCCCcceeeeEecCCCcEEEEEEeccCCCHHHHHH
Confidence 36677654 4678899999865322 2346689999888 599999999999865 45799999999887766654
No 348
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=98.65 E-value=3.5e-07 Score=58.41 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=53.9
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++... .+..+|+|.+...... .+.+.+|+.++.. ++|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus 22 v~~~~~~-~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~-l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~ 93 (260)
T cd05070 22 VWMGTWN-GNTKVAVKTLKPGTMS--PESFLEEAQIMKK-LRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKD 93 (260)
T ss_pred EEEEEec-CCceeEEEEecCCCCC--HHHHHHHHHHHHh-cCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHh
Confidence 4555433 5567899988753222 3568889999888 59999999998764 5678999999999 99998864
No 349
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=98.65 E-value=1.4e-07 Score=62.74 Aligned_cols=76 Identities=20% Similarity=0.200 Sum_probs=58.6
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~sL~~~ 84 (89)
.++++....+|..+|+|.+.... .......+..|+.++.. .+||||+++++.+... ..+|+++||++++|.++
T Consensus 20 ~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 98 (337)
T cd07858 20 IVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRH-LDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQI 98 (337)
T ss_pred EEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHh-cCCCCccchHHheecccccccCcEEEEEeCCCCCHHHH
Confidence 56788888899999999987532 22234567789999887 5999999999987654 35899999998877766
Q ss_pred Hhh
Q psy13291 85 YTK 87 (89)
Q Consensus 85 l~~ 87 (89)
+..
T Consensus 99 ~~~ 101 (337)
T cd07858 99 IRS 101 (337)
T ss_pred Hhc
Confidence 643
No 350
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=98.65 E-value=3.1e-07 Score=58.73 Aligned_cols=71 Identities=17% Similarity=0.140 Sum_probs=52.9
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+++....+ ..+|+|.+..... ..+.+.+|+.++.. ..|||++++++.+. .+..+++|||+++ +|.+++..
T Consensus 22 v~~~~~~~~-~~~~lK~~~~~~~--~~~~~~~E~~~l~~-l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~ 93 (260)
T cd05069 22 VWMGTWNGT-TKVAIKTLKPGTM--MPEAFLQEAQIMKK-LRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKE 93 (260)
T ss_pred EEEEEEcCC-ceEEEEEcccCCc--cHHHHHHHHHHHHh-CCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhh
Confidence 455554333 3589998764322 24567889999887 59999999998764 5678999999999 99998864
No 351
>PHA03209 serine/threonine kinase US3; Provisional
Probab=98.64 E-value=2e-07 Score=62.72 Aligned_cols=68 Identities=7% Similarity=0.013 Sum_probs=55.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|....++..+|+|..... ....|+.++.. ++||||+++++++...+..+++|||+.++|.+++.
T Consensus 81 ~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~ 148 (357)
T PHA03209 81 RVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQN-VNHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLT 148 (357)
T ss_pred EEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHh-CCCCCCcChhheEEeCCeeEEEEEccCCcHHHHHH
Confidence 5788888888999999975432 12458888877 59999999999999999999999999886666654
No 352
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=98.64 E-value=5.2e-07 Score=58.24 Aligned_cols=75 Identities=11% Similarity=0.101 Sum_probs=57.9
Q ss_pred cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+.+....+|. .||+|.+...........+..|+.++.. .+||||+.+++.+.. ...++++||+++ +|.+++
T Consensus 22 ~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l 99 (279)
T cd05109 22 TVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAG-VGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYV 99 (279)
T ss_pred eEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHh-cCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHH
Confidence 356666666665 4899998765555556778899999877 599999999998865 457889999999 998887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
+.
T Consensus 100 ~~ 101 (279)
T cd05109 100 RE 101 (279)
T ss_pred hh
Confidence 64
No 353
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=98.63 E-value=4.3e-07 Score=58.81 Aligned_cols=75 Identities=13% Similarity=0.023 Sum_probs=54.6
Q ss_pred cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+.+....+|. .+++|.+...........+..|+.++.. .+||||+++++++. .+..++++||+++ +|.+++
T Consensus 22 ~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~-l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l 99 (279)
T cd05111 22 TVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS-LDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHV 99 (279)
T ss_pred ceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc-CCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHH
Confidence 356666666666 3677777543333445667778888776 59999999999864 4567889999998 999988
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 100 ~~ 101 (279)
T cd05111 100 RQ 101 (279)
T ss_pred Hh
Confidence 64
No 354
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=98.62 E-value=5e-07 Score=59.21 Aligned_cols=72 Identities=8% Similarity=0.055 Sum_probs=53.9
Q ss_pred cceeEEEcc--CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--CCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLARL--DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--EGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~--~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|.... ++..+|+|.+..... ...+.+|+.+|.. ++||||+++++++.. +..+|+++||++++|.+++.
T Consensus 16 ~Vy~~~~~~~~~~~~~a~k~~~~~~~---~~~~~~E~~~l~~-l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~ 91 (317)
T cd07867 16 HVYKAKRKDGKDEKEYALKQIEGTGI---SMSACREIALLRE-LKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIK 91 (317)
T ss_pred eEEEEEecCCCccceEEEEEecCCCC---cHHHHHHHHHHHh-CCCCCeeeEEEEEeccCCCeEEEEEeeeCCcHHHHHH
Confidence 366676543 567899999864322 2346789999887 599999999998865 45899999999986666553
No 355
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=98.62 E-value=5.3e-07 Score=57.77 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=56.6
Q ss_pred cceeEEEccCCC--EEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhc-c
Q psy13291 11 KPELGLARLDPD--SEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDT-S 80 (89)
Q Consensus 11 ~~~l~~~~~~~~--~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~-s 80 (89)
.|+.+....++. .+|+|.+... ......+.+..|+.++.. ++||||+++++.+... ...+++|||+++ +
T Consensus 14 ~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~ 92 (272)
T cd05075 14 SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKE-FDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGD 92 (272)
T ss_pred eEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCc
Confidence 466666666665 5899988754 234456788899999887 5999999999977542 257899999999 9
Q ss_pred HHHHH
Q psy13291 81 LDKFY 85 (89)
Q Consensus 81 L~~~l 85 (89)
|.+++
T Consensus 93 l~~~~ 97 (272)
T cd05075 93 LHSFL 97 (272)
T ss_pred HHHHH
Confidence 98876
No 356
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=98.61 E-value=4.1e-07 Score=57.93 Aligned_cols=65 Identities=17% Similarity=0.302 Sum_probs=52.2
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..++..+|+|.+.... ..+.+..|+.++.. .+|||++++++++... ..+++|||+++ +|.++++.
T Consensus 26 ~~~~~~~~iK~~~~~~---~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~ 91 (254)
T cd05083 26 EYTGQKVAVKNIKCDV---TAQAFLEETAVMTK-LHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRT 91 (254)
T ss_pred ccCCCceEEEeecCcc---hHHHHHHHHHHHHh-CCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHh
Confidence 3577889999886432 24568889999887 5999999999988654 57999999999 99998864
No 357
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=98.60 E-value=2.6e-07 Score=61.70 Aligned_cols=74 Identities=22% Similarity=0.183 Sum_probs=58.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------------CEEEEEecc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------------GDVWICMEV 76 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------------~~~~iv~E~ 76 (89)
.|+++....+|..+|+|.+..... .....+.+|+.++.. .+||||+++++++... ..+|+++||
T Consensus 20 ~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~ 97 (342)
T cd07854 20 LVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRR-LDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEY 97 (342)
T ss_pred EEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHh-cCCCcchhhHhhhcccccccccccccccccceEEEEeec
Confidence 467888888999999999975433 335668889999887 5999999999776543 368999999
Q ss_pred hhccHHHHHh
Q psy13291 77 MDTSLDKFYT 86 (89)
Q Consensus 77 ~~~sL~~~l~ 86 (89)
++++|.+++.
T Consensus 98 ~~~~L~~~~~ 107 (342)
T cd07854 98 METDLANVLE 107 (342)
T ss_pred ccccHHHHHH
Confidence 9887776664
No 358
>KOG4279|consensus
Probab=98.59 E-value=3.8e-08 Score=71.90 Aligned_cols=74 Identities=15% Similarity=0.076 Sum_probs=63.1
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|+-+....|...+|||.|+. .++.+.+.+-.|+.+.+. +.|.|||+|.|++..++.+-|+||-.+| ||.++|+.
T Consensus 591 VYA~RD~~tqvrIaIKEIpe-kdsr~~QPLhEEIaLH~~-LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrs 665 (1226)
T KOG4279|consen 591 VYAARDMDTQVRIAIKEIPE-KDSREVQPLHEEIALHST-LRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRS 665 (1226)
T ss_pred EEeeccccceeEEEeeeccc-ccchhhccHHHHHHHHHH-HhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHh
Confidence 56677777888899999984 344567888889998666 5999999999999999999999999999 99999874
No 359
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=98.59 E-value=9e-08 Score=61.07 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=57.0
Q ss_pred cceeEEEccCCCEEEEEEEeec----CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT----VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~----~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.++++....++..+++|.+... ........+..|+.++.. .+||||+++++++..++..++++||+++ +|++++
T Consensus 15 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~ 93 (260)
T cd08222 15 TVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSK-LDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKL 93 (260)
T ss_pred eEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHh-CCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHH
Confidence 4566666666666777766532 112234456678888777 5999999999999999999999999999 999887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 94 ~~ 95 (260)
T cd08222 94 EE 95 (260)
T ss_pred HH
Confidence 53
No 360
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=98.58 E-value=7e-07 Score=58.51 Aligned_cols=75 Identities=12% Similarity=0.137 Sum_probs=56.4
Q ss_pred cceeEEEccCCC----EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 11 KPELGLARLDPD----SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~----~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.|+.+....+|. .+|+|.+...........+.+|+.++.. .+||||+++++.+... ..++++||+++ +|.+++
T Consensus 22 ~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~-l~h~niv~~~~~~~~~-~~~~v~e~~~~g~l~~~~ 99 (303)
T cd05110 22 TVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS-MDHPHLVRLLGVCLSP-TIQLVTQLMPHGCLLDYV 99 (303)
T ss_pred cEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHh-CCCCCcccEEEEEcCC-CceeeehhcCCCCHHHHH
Confidence 456666666665 4688888654444445568889999877 5999999999988654 46788999998 888887
Q ss_pred hh
Q psy13291 86 TK 87 (89)
Q Consensus 86 ~~ 87 (89)
..
T Consensus 100 ~~ 101 (303)
T cd05110 100 HE 101 (303)
T ss_pred Hh
Confidence 54
No 361
>KOG1151|consensus
Probab=98.58 E-value=1.2e-07 Score=66.51 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=58.5
Q ss_pred ceeEEEccCCCEEEEEEEeecCCH------HHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNT------QEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~------~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~ 83 (89)
|+.|......+.+|+|+-..+.++ +......+|-.|.. .++||-||.+|++|.- .+.++-|+|||+| +|+-
T Consensus 479 VyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHK-eLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDF 557 (775)
T KOG1151|consen 479 VYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHK-ELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDF 557 (775)
T ss_pred HHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhh-ccCcceeeeeeeeeeeccccceeeeeecCCCchhH
Confidence 344555567788999977554333 23456789999954 4799999999999976 5689999999999 9999
Q ss_pred HHhhc
Q psy13291 84 FYTKV 88 (89)
Q Consensus 84 ~l~~~ 88 (89)
+|+.+
T Consensus 558 YLKQh 562 (775)
T KOG1151|consen 558 YLKQH 562 (775)
T ss_pred HHHhh
Confidence 99875
No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.57 E-value=9e-07 Score=58.75 Aligned_cols=76 Identities=13% Similarity=0.099 Sum_probs=57.4
Q ss_pred cceeEEEccC--CCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC----CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLD--PDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE----GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~--~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~----~~~~iv~E~~~~sL~~ 83 (89)
.|+++....+ +..+|+|.+..... ....+.+..|+.++....+||||+++++..... ..+|+++||++++|.+
T Consensus 15 ~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~ 94 (332)
T cd07857 15 IVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQ 94 (332)
T ss_pred EEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHH
Confidence 4677777777 88999999875322 223566788999988865799999999875432 4689999999887777
Q ss_pred HHh
Q psy13291 84 FYT 86 (89)
Q Consensus 84 ~l~ 86 (89)
++.
T Consensus 95 ~l~ 97 (332)
T cd07857 95 IIR 97 (332)
T ss_pred HHh
Confidence 764
No 363
>KOG0658|consensus
Probab=98.56 E-value=6.1e-08 Score=65.45 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=53.0
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--C---EEEEEecchhccHHHHHh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--G---DVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--~---~~~iv~E~~~~sL~~~l~ 86 (89)
|+-+....+++.+|||.+-.... --.+|+++|.. ..|||||++.-+|... + ...+|||||+.+|.++++
T Consensus 40 Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~-l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r 113 (364)
T KOG0658|consen 40 VYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRK-LDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIR 113 (364)
T ss_pred EEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHh-cCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHH
Confidence 45556667889999999854311 22358999876 6999999998877663 2 567899999999999887
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 114 ~ 114 (364)
T KOG0658|consen 114 H 114 (364)
T ss_pred H
Confidence 3
No 364
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.56 E-value=5.5e-07 Score=61.50 Aligned_cols=68 Identities=10% Similarity=-0.037 Sum_probs=51.0
Q ss_pred cceeEEEcc-CCCEEEEEEEeecC----CHHHHHHHHHHHHHHHhcCCCCceee-EEeEEEECCEEEEEecchhc-cHHH
Q psy13291 11 KPELGLARL-DPDSEWSFRITFTV----NTQEHKRLLTDLDICMRSSDCAHTVQ-FYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 11 ~~~l~~~~~-~~~~~AvK~i~~~~----~~~~~~~~~~E~~il~~~~~hpniv~-~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
+|++|.+.. +++.+|+|.+.... .....+.+.+|+.+|..+ +|+|++. +++ .+..|++||||+| +|..
T Consensus 33 ~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~ 107 (365)
T PRK09188 33 TVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLA----TGKDGLVRGWTEGVPLHL 107 (365)
T ss_pred EEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEE----cCCcEEEEEccCCCCHHH
Confidence 578887776 77888999876331 233456788999999884 8999885 443 2568999999999 8863
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=98.56 E-value=9e-07 Score=59.20 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=57.7
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+++....+|..+|+|.+.... .....+.+.+|+.++.+ .+||||+++++++... +..+++++++.++|.+
T Consensus 32 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~ 110 (345)
T cd07877 32 SVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH-MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNN 110 (345)
T ss_pred EEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHH-cCCCcccceeeeeeecccccccccEEEEehhcccCHHH
Confidence 46777777899999999997532 22234567889999887 5999999999988653 3578999988558887
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
+++.
T Consensus 111 ~~~~ 114 (345)
T cd07877 111 IVKC 114 (345)
T ss_pred HHhc
Confidence 7653
No 366
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=98.55 E-value=1.1e-06 Score=55.99 Aligned_cols=65 Identities=17% Similarity=0.251 Sum_probs=52.1
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..|..+|+|.+... ...+.+..|+.++.. .+|||++++++++.. .+..+++|||+++ +|.++++.
T Consensus 27 ~~~~~~~~k~~~~~---~~~~~~~~e~~~l~~-l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 93 (256)
T cd05082 27 YRGNKVAVKCIKND---ATAQAFLAEASVMTQ-LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS 93 (256)
T ss_pred EcCCcEEEEEeCCC---chHHHHHHHHHHHHh-CCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHh
Confidence 35788999988632 224568889999887 599999999998755 4679999999999 99998864
No 367
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=98.53 E-value=2.1e-07 Score=62.09 Aligned_cols=76 Identities=9% Similarity=0.121 Sum_probs=59.6
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCE------EEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGD------VWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~------~~iv~E~~~~sL~~ 83 (89)
.++++....++..+|+|.+.... +......+..|+.++.. ..|||++++.+++...+. +++++||+.++|.+
T Consensus 30 ~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~ 108 (343)
T cd07851 30 QVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKH-MDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNN 108 (343)
T ss_pred EEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHh-ccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHH
Confidence 56778888899999999986532 23345667889999887 599999999988876554 99999999668888
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 109 ~~~~ 112 (343)
T cd07851 109 IVKC 112 (343)
T ss_pred HHhc
Confidence 7653
No 368
>KOG0596|consensus
Probab=98.52 E-value=2.6e-07 Score=65.74 Aligned_cols=77 Identities=16% Similarity=0.172 Sum_probs=61.7
Q ss_pred cceeEEEccCCCEEEEEEEe-ecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 11 KPELGLARLDPDSEWSFRIT-FTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~-~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
+|+.+..... +.+|+|.+. ...+....+.+..|+.+|.++.+|.+||+++++=..++.+|+||||=+.+|..+|++.
T Consensus 376 kV~kV~~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd~DL~kiL~k~ 453 (677)
T KOG0596|consen 376 KVFKVLNSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGDIDLNKILKKK 453 (677)
T ss_pred eeeeeecCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeecccccHHHHHHhc
Confidence 5666654333 445555554 4567777899999999999999999999999999999999999997666999999763
No 369
>KOG0612|consensus
Probab=98.51 E-value=1.9e-08 Score=75.70 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=62.8
Q ss_pred ceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 12 PELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
|.++.++.|+.+||.|+++.- ....+...|..|-.+|.- .+.+=|++++-+|.++.++|+|||||+| +|-.++.+.
T Consensus 91 V~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~-~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~ 169 (1317)
T KOG0612|consen 91 VALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVF-GNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKF 169 (1317)
T ss_pred eEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHc-CCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhc
Confidence 678999999999999999751 122335567777788655 5889999999999999999999999999 999988764
No 370
>KOG1035|consensus
Probab=98.51 E-value=7.2e-08 Score=73.00 Aligned_cols=57 Identities=14% Similarity=0.191 Sum_probs=50.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG 68 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~ 68 (89)
-|.+|.++..|+.||||.|+...++.....+.+|+.+|++ ++|||||+||.++....
T Consensus 494 ~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LAr-LnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 494 SVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLAR-LNHPNVVRYYSAWVEST 550 (1351)
T ss_pred eEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhccC
Confidence 3788999999999999999987766677889999999999 59999999999887654
No 371
>KOG0584|consensus
Probab=98.49 E-value=1.1e-07 Score=67.98 Aligned_cols=77 Identities=12% Similarity=0.179 Sum_probs=58.4
Q ss_pred cceeEEEccCCCEEEEEEEe---ecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRIT---FTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~---~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~ 84 (89)
.||.|....+|..||==.+. ........+++..|+++|.. +.|||||+||+++.+.+ .+.+++|++.+ +|-.|
T Consensus 55 tVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKs-L~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y 133 (632)
T KOG0584|consen 55 TVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKS-LKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREY 133 (632)
T ss_pred eeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHcc-CCCCceeeeeeheecCCCceeeeeeecccCCcHHHH
Confidence 45666665566554433332 23344567899999999987 59999999999999875 59999999999 99999
Q ss_pred Hhhc
Q psy13291 85 YTKV 88 (89)
Q Consensus 85 l~~~ 88 (89)
++++
T Consensus 134 ~kk~ 137 (632)
T KOG0584|consen 134 RKKH 137 (632)
T ss_pred HHHh
Confidence 9875
No 372
>KOG0690|consensus
Probab=98.48 E-value=7.1e-08 Score=65.34 Aligned_cols=71 Identities=11% Similarity=-0.011 Sum_probs=60.9
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
||-||..+.+|..+|+|++... ...++...-+.|-++|+. ..||++..+.-+|+.++.++.||||++| .|-
T Consensus 183 KVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~-~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf 256 (516)
T KOG0690|consen 183 KVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQN-CRHPFLTSLKYSFQTQDRLCFVMEYANGGELF 256 (516)
T ss_pred eEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHh-ccCcHHHHhhhhhccCceEEEEEEEccCceEe
Confidence 6888999999999999999764 234456677889999888 5999999999999999999999999999 654
No 373
>KOG0604|consensus
Probab=98.48 E-value=5.1e-08 Score=65.15 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=55.7
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc-cHHHH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~-sL~~~ 84 (89)
-||-.|.++.||+.+|+|++.. .+...+|+++.-...+|||||++.++|.. ...+.||||.|+| .|-+-
T Consensus 76 GkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsr 149 (400)
T KOG0604|consen 76 GKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSR 149 (400)
T ss_pred CceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHH
Confidence 3677889999999999998853 33455677776555699999999998865 3589999999999 76555
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
|+
T Consensus 150 iq 151 (400)
T KOG0604|consen 150 IQ 151 (400)
T ss_pred HH
Confidence 44
No 374
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=98.46 E-value=2.1e-06 Score=54.99 Aligned_cols=75 Identities=9% Similarity=0.103 Sum_probs=55.7
Q ss_pred cceeEEEc---cCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhc-
Q psy13291 11 KPELGLAR---LDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDT- 79 (89)
Q Consensus 11 ~~~l~~~~---~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~- 79 (89)
.|+.+... .++..+|+|.+.... .....+.+.+|+.++.. ++||||+++++.+.... ..++++||+.+
T Consensus 14 ~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
T cd05074 14 SVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKE-FDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHG 92 (273)
T ss_pred CEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhc-CCCCCcceEEEEEccCCCCCcccceEEEEecCCCC
Confidence 34555433 467889999997543 33446778899999887 59999999999886532 35788999998
Q ss_pred cHHHHHh
Q psy13291 80 SLDKFYT 86 (89)
Q Consensus 80 sL~~~l~ 86 (89)
+|.+++.
T Consensus 93 ~l~~~~~ 99 (273)
T cd05074 93 DLHTFLL 99 (273)
T ss_pred cHHHHHH
Confidence 9887763
No 375
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=98.45 E-value=8.6e-07 Score=57.72 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=55.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEEecchhccH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWICMEVMDTSL 81 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv~E~~~~sL 81 (89)
.|+++....++..+|+|.+..... +.....+.+|+.++.. ++||||+++++.+... ..+++++||+++++
T Consensus 23 ~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~-l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l 101 (311)
T cd07866 23 EVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKK-LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDL 101 (311)
T ss_pred EEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHh-cCCCCccchhhheecccccccccCceEEEEEecCCcCH
Confidence 577888888999999999975422 2223456789999887 5999999999887543 35799999998855
Q ss_pred HHHH
Q psy13291 82 DKFY 85 (89)
Q Consensus 82 ~~~l 85 (89)
...+
T Consensus 102 ~~~~ 105 (311)
T cd07866 102 SGLL 105 (311)
T ss_pred HHHH
Confidence 5444
No 376
>PHA03207 serine/threonine kinase US3; Provisional
Probab=98.43 E-value=1.9e-06 Score=58.68 Aligned_cols=69 Identities=12% Similarity=-0.003 Sum_probs=52.4
Q ss_pred cceeEEEc--cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 11 KPELGLAR--LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~--~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
.|++|... .++..+|+|.+... ....+|+.+|.. ++||||+++++.+...+.++++||++.++|.+++.
T Consensus 107 ~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~-l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~ 177 (392)
T PHA03207 107 EVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKT-ISHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVD 177 (392)
T ss_pred EEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHh-cCCCCccceeeeEeeCCEEEEEehhcCCCHHHHHH
Confidence 35555543 35577899987642 123469999887 59999999999999999999999999886666654
No 377
>KOG0695|consensus
Probab=98.41 E-value=1e-07 Score=64.90 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=61.4
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
||-++.+..|.+++|+|++... +++++.+=++.|-.+..+..+||+++-++.+|..+..++.+.||.+| +|-
T Consensus 265 kvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdlm 339 (593)
T KOG0695|consen 265 KVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDLM 339 (593)
T ss_pred hhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCccee
Confidence 6778888999999999999763 44555666677888888878999999999999999999999999999 864
No 378
>KOG2052|consensus
Probab=98.40 E-value=5e-07 Score=62.80 Aligned_cols=69 Identities=10% Similarity=0.193 Sum_probs=53.3
Q ss_pred EEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHh-cCCCCceeeEEeEEEEC----CEEEEEecchhc-cHHHHHhhc
Q psy13291 16 LARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMR-SSDCAHTVQFYGAMFRE----GDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 16 ~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~-~~~hpniv~~~~~~~~~----~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
..++.|+.||||++... +-+...+|.+|.+. ++.|+||+.|.++-... ..+|++.||=+. ||.++|.+.
T Consensus 229 rG~wrGe~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~ 303 (513)
T KOG2052|consen 229 RGRWRGEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN 303 (513)
T ss_pred eccccCCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc
Confidence 34578899999999743 13345667777664 45999999999877553 279999999999 999999763
No 379
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=98.40 E-value=1.5e-06 Score=58.08 Aligned_cols=74 Identities=12% Similarity=0.149 Sum_probs=56.1
Q ss_pred cceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC------CEEEEEecchhccHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE------GDVWICMEVMDTSLDK 83 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~------~~~~iv~E~~~~sL~~ 83 (89)
.|+.|....+|..+|+|.+.... .......+.+|+.++.. ..||||+++++++... ...|+++||+.+++..
T Consensus 30 ~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~ 108 (342)
T cd07879 30 SVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKH-MQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTDLQK 108 (342)
T ss_pred EEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHh-cCCCCccchhheecccccCCCCceEEEEecccccCHHH
Confidence 46677777889999999987532 22234567889999887 5999999999988754 3579999999776665
Q ss_pred HH
Q psy13291 84 FY 85 (89)
Q Consensus 84 ~l 85 (89)
++
T Consensus 109 ~~ 110 (342)
T cd07879 109 IM 110 (342)
T ss_pred HH
Confidence 43
No 380
>KOG0696|consensus
Probab=98.39 E-value=1.9e-08 Score=69.75 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=64.1
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
||-|+..+.|.+.+|||++... .++++.+--+.|-.+|.-...-|++++++++|+..+.+|.||||+.| +|-.-|++
T Consensus 364 KVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ 443 (683)
T KOG0696|consen 364 KVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ 443 (683)
T ss_pred eeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHH
Confidence 6788888899999999999764 23444666677888887655678999999999999999999999999 98877765
Q ss_pred c
Q psy13291 88 V 88 (89)
Q Consensus 88 ~ 88 (89)
+
T Consensus 444 ~ 444 (683)
T KOG0696|consen 444 V 444 (683)
T ss_pred h
Confidence 3
No 381
>KOG0666|consensus
Probab=98.34 E-value=1.1e-07 Score=63.88 Aligned_cols=77 Identities=8% Similarity=0.067 Sum_probs=58.3
Q ss_pred cceeEEEccCCC----EEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPD----SEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~----~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~sL~~~ 84 (89)
+|+.|....++- .+|+|.+....+ +-......+|+.++.. +.|||++.+..+|.. +..+|+++||++.+|-++
T Consensus 39 ~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~RE-l~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhDL~~I 117 (438)
T KOG0666|consen 39 KVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRE-LKHPNVISLVKVFLSHDKKVWLLFDYAEHDLWHI 117 (438)
T ss_pred eeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHH-hcCCcchhHHHHHhccCceEEEEehhhhhhHHHH
Confidence 466665444442 689999976422 1234567789999766 699999999999987 679999999999998888
Q ss_pred Hhhc
Q psy13291 85 YTKV 88 (89)
Q Consensus 85 l~~~ 88 (89)
|+-+
T Consensus 118 I~fH 121 (438)
T KOG0666|consen 118 IKFH 121 (438)
T ss_pred HHHh
Confidence 8754
No 382
>KOG3653|consensus
Probab=98.30 E-value=1.3e-06 Score=61.18 Aligned_cols=67 Identities=21% Similarity=0.229 Sum_probs=54.9
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHh-cCCCCceeeEEeEEEECC----EEEEEecchhc-cHHHHHhhc
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMR-SSDCAHTVQFYGAMFREG----DVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~-~~~hpniv~~~~~~~~~~----~~~iv~E~~~~-sL~~~l~~~ 88 (89)
..+++.||||+++. ...+.+..|-.|..- ...|+||++|+++-...+ .+|||+||-+. ||.++|+.+
T Consensus 230 qL~~~~VAVKifp~----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n 302 (534)
T KOG3653|consen 230 QLDNRLVAVKIFPE----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN 302 (534)
T ss_pred hccCceeEEEecCH----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc
Confidence 45789999999973 346778888888654 238999999998877765 89999999999 999999764
No 383
>KOG1152|consensus
Probab=98.21 E-value=1.2e-06 Score=62.84 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=60.3
Q ss_pred cceeEEEccCCCEEEEEEEeecC---CH----HHHHHHHHHHHHHHhcCC---CCceeeEEeEEEECCEEEEEecchh-c
Q psy13291 11 KPELGLARLDPDSEWSFRITFTV---NT----QEHKRLLTDLDICMRSSD---CAHTVQFYGAMFREGDVWICMEVMD-T 79 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~---~~----~~~~~~~~E~~il~~~~~---hpniv~~~~~~~~~~~~~iv~E~~~-~ 79 (89)
+|.+|.+......|.+|.|.... +. ....++..|++||+.+ + |+||+++.+.|.+++++||.||-=. |
T Consensus 576 kV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFEddd~yyl~te~hg~g 654 (772)
T KOG1152|consen 576 KVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFEDDDYYYLETEVHGEG 654 (772)
T ss_pred eEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheeecCCeeEEEecCCCCC
Confidence 68899999999999999997531 11 1234578999999874 5 9999999999999999999999433 4
Q ss_pred -cHHHHHhh
Q psy13291 80 -SLDKFYTK 87 (89)
Q Consensus 80 -sL~~~l~~ 87 (89)
+|-++|..
T Consensus 655 IDLFd~IE~ 663 (772)
T KOG1152|consen 655 IDLFDFIEF 663 (772)
T ss_pred cchhhhhhc
Confidence 77777653
No 384
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=98.20 E-value=9.7e-06 Score=52.40 Aligned_cols=73 Identities=11% Similarity=-0.058 Sum_probs=52.9
Q ss_pred ccceeEEEccCCCEEEEEEEeecC--CHHHHHH------HHHHHHHHHhcCCCCceeeEEeEEEEC--------CEEEEE
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTV--NTQEHKR------LLTDLDICMRSSDCAHTVQFYGAMFRE--------GDVWIC 73 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~--~~~~~~~------~~~E~~il~~~~~hpniv~~~~~~~~~--------~~~~iv 73 (89)
.+|.++.. ++..+|+|.+.... .....+. +.+|+..+.++ .||+|....+.+... +..+|+
T Consensus 45 ~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~~~~~~~~~~~~~~~lv 121 (232)
T PRK10359 45 TKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYLLAERKTLRYAHTYIML 121 (232)
T ss_pred eEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeeeecccccccccCCeEEE
Confidence 45666543 57789999997532 2222233 56888888885 999999998886643 358999
Q ss_pred ecchhc-cHHHHH
Q psy13291 74 MEVMDT-SLDKFY 85 (89)
Q Consensus 74 ~E~~~~-sL~~~l 85 (89)
|||++| +|.++.
T Consensus 122 mEyi~G~tL~~~~ 134 (232)
T PRK10359 122 IEYIEGVELNDMP 134 (232)
T ss_pred EEEECCccHHHhh
Confidence 999999 997763
No 385
>KOG2345|consensus
Probab=98.16 E-value=8e-07 Score=58.07 Aligned_cols=76 Identities=11% Similarity=0.084 Sum_probs=60.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC-----CEEEEEecchhc-cHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~ 84 (89)
.|+|+.+..++..||+|+|.-.. .+..+..++|++...+ ++|||++++++....+ ..+||+++|-.- ||.+.
T Consensus 36 fv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rk-f~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~ 113 (302)
T KOG2345|consen 36 FVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRK-FNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDE 113 (302)
T ss_pred eeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHh-hCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHH
Confidence 57888899999999999997654 3457888999999655 7999999998755432 369999998887 88888
Q ss_pred Hhhc
Q psy13291 85 YTKV 88 (89)
Q Consensus 85 l~~~ 88 (89)
++..
T Consensus 114 i~~~ 117 (302)
T KOG2345|consen 114 IERL 117 (302)
T ss_pred HHHH
Confidence 7653
No 386
>KOG0608|consensus
Probab=98.14 E-value=2.3e-06 Score=62.27 Aligned_cols=76 Identities=9% Similarity=0.076 Sum_probs=60.4
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|+|+.-..|...||.|.+... ...+....+..|-.||... +.+-||++|-+|.+.+.+|+||||++| ++-.+|-+
T Consensus 644 eV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIr 722 (1034)
T KOG0608|consen 644 EVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIR 722 (1034)
T ss_pred eeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEEeccCCccHHHHHHH
Confidence 4667766678888888888653 1223455677899999874 999999999999999999999999999 98887643
No 387
>PTZ00284 protein kinase; Provisional
Probab=98.12 E-value=3.6e-05 Score=53.64 Aligned_cols=74 Identities=11% Similarity=0.021 Sum_probs=51.6
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc-----CCCCceeeEEeEEEEC-CEEEEEecchhccHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS-----SDCAHTVQFYGAMFRE-GDVWICMEVMDTSLDKF 84 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~-----~~hpniv~~~~~~~~~-~~~~iv~E~~~~sL~~~ 84 (89)
.|++|.+..++..||+|++.... ........|+.++..+ .+|++++.++++|..+ +.+|++||++.++|.++
T Consensus 144 ~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~ 221 (467)
T PTZ00284 144 KVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDW 221 (467)
T ss_pred EEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccCCCHHHH
Confidence 57788888899999999996431 1233345566665542 2456688888888764 58999999987666665
Q ss_pred Hh
Q psy13291 85 YT 86 (89)
Q Consensus 85 l~ 86 (89)
+.
T Consensus 222 l~ 223 (467)
T PTZ00284 222 IM 223 (467)
T ss_pred HH
Confidence 54
No 388
>KOG0193|consensus
Probab=98.09 E-value=8.2e-06 Score=58.65 Aligned_cols=62 Identities=10% Similarity=0.075 Sum_probs=54.6
Q ss_pred EEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 23 SEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 23 ~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.||||.+... .+++..+.|..|+..|.+. .|.||+=|.|++..++. .||..||+| ||..+|.
T Consensus 416 dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlH 479 (678)
T KOG0193|consen 416 DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIITQWCEGSSLYTHLH 479 (678)
T ss_pred ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeeehhccCchhhhhcc
Confidence 4799999864 5666789999999999885 99999999999998887 999999999 9998875
No 389
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.06 E-value=2.8e-05 Score=48.49 Aligned_cols=73 Identities=14% Similarity=-0.050 Sum_probs=53.0
Q ss_pred ceeEEEccCCCEEEEEEEeecC--CH-----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTV--NT-----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~--~~-----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
|+.+.. .|..+++|...... .. .....+.+|+.++..+ .|+++......+...+..+++|||++| +|.+
T Consensus 12 vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~ 88 (211)
T PRK14879 12 IYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKD 88 (211)
T ss_pred EEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHH
Confidence 455543 78889999865321 11 1234577899998874 788887777777777889999999999 9998
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 89 ~~~~ 92 (211)
T PRK14879 89 LINS 92 (211)
T ss_pred HHHh
Confidence 8754
No 390
>KOG0668|consensus
Probab=98.06 E-value=5.3e-06 Score=54.11 Aligned_cols=71 Identities=7% Similarity=0.106 Sum_probs=57.4
Q ss_pred eeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC--EEEEEecchhc-cHHHHHhh
Q psy13291 13 ELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG--DVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 13 ~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~--~~~iv~E~~~~-sL~~~l~~ 87 (89)
.-+.+..+++.++||++.. -....+.+|+.||.-+.+||||+.+++...++. .+.+++||.++ ++..+...
T Consensus 55 Feg~~~~~~eK~ViKiLKP----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t 128 (338)
T KOG0668|consen 55 FEGINITNNEKCVIKILKP----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYPT 128 (338)
T ss_pred hcccccCCCceEEEeeech----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHhhh
Confidence 3445557888899998863 345678899999999889999999999998864 68899999999 88777643
No 391
>KOG1025|consensus
Probab=98.06 E-value=1.4e-06 Score=64.65 Aligned_cols=65 Identities=9% Similarity=0.022 Sum_probs=54.9
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
..||+|++...........++.|.-+|.+ ++|||++++.|.+.... +.|+++||++ +|.++++.+
T Consensus 726 ipVaiKvl~~~t~~~~s~e~LdeAl~mas-ldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~h 791 (1177)
T KOG1025|consen 726 IPVAIKVLIEFTSPKASIELLDEALRMAS-LDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREH 791 (1177)
T ss_pred ceeEEEEeeccCCchhhHHHHHHHHHHhc-CCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHh
Confidence 46899999766555567789999999887 59999999999887766 8999999999 999998764
No 392
>KOG1345|consensus
Probab=98.05 E-value=2.3e-06 Score=56.85 Aligned_cols=73 Identities=12% Similarity=0.028 Sum_probs=59.5
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEE-eEEEECCEEEEEecchhc-cHHHH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFY-GAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~-~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
-|+-||.|+.+++.+++|.++.... ...+|.+|...--.+..|.||+.-| ..|...+.+..++||++. +|.+-
T Consensus 38 gkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~sn 112 (378)
T KOG1345|consen 38 GKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSN 112 (378)
T ss_pred eeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchhhhh
Confidence 3688999999999999999975433 3778889988755666899999976 567778889999999998 88653
No 393
>KOG1167|consensus
Probab=98.05 E-value=6.4e-06 Score=56.71 Aligned_cols=66 Identities=15% Similarity=0.241 Sum_probs=57.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhhc
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.++.+|+|.+..+.. ...+..|+++|..+.++.||+.+.+++..++.+.++|||.+. +..+++...
T Consensus 63 ~~~~valk~i~~ts~---p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~l 129 (418)
T KOG1167|consen 63 KRRYVALKAIYRTSS---PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYRSL 129 (418)
T ss_pred ccceEeeeecccccC---chHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHhcC
Confidence 677899999986543 345888999999999999999999999999999999999999 998888654
No 394
>KOG1290|consensus
Probab=98.01 E-value=6.1e-05 Score=53.34 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=59.3
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-------CceeeEEeEEEEC----CEEEEEecchhcc
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-------AHTVQFYGAMFRE----GDVWICMEVMDTS 80 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-------pniv~~~~~~~~~----~~~~iv~E~~~~s 80 (89)
|-||....+.+.||+|+...+ ....+..+.|+.+|++...+ .+||++++.|... .++++|+|++..+
T Consensus 94 VWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdn 171 (590)
T KOG1290|consen 94 VWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDN 171 (590)
T ss_pred eEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhH
Confidence 567888889999999999754 23467778899999875433 3799999999874 3899999999888
Q ss_pred HHHHHhhc
Q psy13291 81 LDKFYTKV 88 (89)
Q Consensus 81 L~~~l~~~ 88 (89)
|-.+|++.
T Consensus 172 LLklI~~s 179 (590)
T KOG1290|consen 172 LLKLIKYS 179 (590)
T ss_pred HHHHHHHh
Confidence 88888764
No 395
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=97.96 E-value=2.3e-05 Score=48.96 Aligned_cols=69 Identities=6% Similarity=-0.070 Sum_probs=42.8
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-HH------------------------HHHHHHHHHHHHhcCCCCceeeEEeEEE
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-QE------------------------HKRLLTDLDICMRSSDCAHTVQFYGAMF 65 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-~~------------------------~~~~~~E~~il~~~~~hpniv~~~~~~~ 65 (89)
.|++|... +|+.+|+|++...... .. ......|..+|..+ .++++........
T Consensus 12 ~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~v~~p~~~~~ 89 (190)
T cd05147 12 NVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTAGIPCPEPILL 89 (190)
T ss_pred EEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHCCCCCCcEEEe
Confidence 47788776 8999999999753210 00 11234588888875 5665533222222
Q ss_pred ECCEEEEEecchhc-cHHH
Q psy13291 66 REGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 66 ~~~~~~iv~E~~~~-sL~~ 83 (89)
. ..+|+|||++| ++..
T Consensus 90 -~-~~~iVmE~i~g~~l~~ 106 (190)
T cd05147 90 -K-SHVLVMEFIGDDGWAA 106 (190)
T ss_pred -c-CCEEEEEEeCCCCCcc
Confidence 2 23899999998 6644
No 396
>KOG0603|consensus
Probab=97.92 E-value=6.3e-06 Score=59.14 Aligned_cols=71 Identities=11% Similarity=0.105 Sum_probs=56.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~ 86 (89)
.+..+.+..+++..++|++..... +...|+.++....+|||++.+++.+..+-+.|+|||++.| .|+.+..
T Consensus 337 ~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~ 409 (612)
T KOG0603|consen 337 AVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRS 409 (612)
T ss_pred ceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHh
Confidence 456778889999999999976522 2334676766667999999999999999999999999999 5665543
No 397
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.86 E-value=9.2e-05 Score=45.79 Aligned_cols=73 Identities=12% Similarity=-0.048 Sum_probs=49.9
Q ss_pred ceeEEEccCCCEEEEEEEeecC--C-H----HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTV--N-T----QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~--~-~----~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
|+.+. .+|..+++|...... . . ....++.+|+.++..+ .|+++......+...+..+++|||++| +|.+
T Consensus 10 vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~ 86 (199)
T TIGR03724 10 IYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKD 86 (199)
T ss_pred EEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEEECCccHHH
Confidence 55554 577889999865321 1 1 1235677899998774 676655544455566778999999999 9988
Q ss_pred HHhh
Q psy13291 84 FYTK 87 (89)
Q Consensus 84 ~l~~ 87 (89)
++..
T Consensus 87 ~~~~ 90 (199)
T TIGR03724 87 VIEE 90 (199)
T ss_pred HHhh
Confidence 7653
No 398
>PHA03210 serine/threonine kinase US3; Provisional
Probab=97.84 E-value=9.2e-05 Score=52.30 Aligned_cols=48 Identities=13% Similarity=0.152 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 37 EHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 37 ~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
....+.+|+.+|.. ++||||+++++++..++..|+++|++.+++.+++
T Consensus 206 ~~~~~~~Ei~il~~-l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l 253 (501)
T PHA03210 206 AAIQLENEILALGR-LNHENILKIEEILRSEANTYMITQKYDFDLYSFM 253 (501)
T ss_pred HHHHHHHHHHHHHh-CCCCCcCcEeEEEEECCeeEEEEeccccCHHHHH
Confidence 34567899999888 5999999999999999999999999987444443
No 399
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=97.76 E-value=0.00021 Score=44.35 Aligned_cols=68 Identities=7% Similarity=-0.134 Sum_probs=44.1
Q ss_pred cceeEEEccCCCEEEEEEEeecCCH-------------------------HHHHHHHHHHHHHHhcCCCCceeeEEeEEE
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNT-------------------------QEHKRLLTDLDICMRSSDCAHTVQFYGAMF 65 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~-------------------------~~~~~~~~E~~il~~~~~hpniv~~~~~~~ 65 (89)
.|++|... +|+.||+|++...... .....+..|...+.++ .|+++........
T Consensus 12 ~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~ 89 (190)
T cd05145 12 NVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEAGVPVPEPILL 89 (190)
T ss_pred EEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhCCCCCceEEEe
Confidence 47778776 8999999999753211 0012235788888774 7887644433333
Q ss_pred ECCEEEEEecchhc-cHH
Q psy13291 66 REGDVWICMEVMDT-SLD 82 (89)
Q Consensus 66 ~~~~~~iv~E~~~~-sL~ 82 (89)
.. .|++|||++| ++.
T Consensus 90 ~~--~~lVmE~~~g~~~~ 105 (190)
T cd05145 90 KK--NVLVMEFIGDDGSP 105 (190)
T ss_pred cC--CEEEEEEecCCCch
Confidence 22 4899999998 543
No 400
>KOG0614|consensus
Probab=97.75 E-value=1.1e-06 Score=62.35 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=63.7
Q ss_pred cceeEEEccCCCEEEEEEEeec--CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 11 KPELGLARLDPDSEWSFRITFT--VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~--~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+|+|+........+|+|+++.. .+....+.+..|-.||+.+ ..|+|+++|-+|.++.++|++||-|-| .+=.+++.
T Consensus 435 RVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrd 513 (732)
T KOG0614|consen 435 RVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRD 513 (732)
T ss_pred eEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhh
Confidence 5778877666667899999753 4556677899999999884 899999999999999999999999999 88777764
No 401
>KOG0665|consensus
Probab=97.74 E-value=6.9e-06 Score=55.29 Aligned_cols=71 Identities=14% Similarity=0.217 Sum_probs=53.4
Q ss_pred EEEccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC------EEEEEecchhccHHHHHh
Q psy13291 15 GLARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG------DVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 15 ~~~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~------~~~iv~E~~~~sL~~~l~ 86 (89)
|...-+++.+|+|.+... .+.....+..+|..++.. ..|+|+++++.+|..+. .+|++||||+.+|..++.
T Consensus 35 a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~-v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~ 112 (369)
T KOG0665|consen 35 AFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKC-VNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL 112 (369)
T ss_pred cchhhccCceehhhhcCccccCccchhhhhhhhhhhh-hcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH
Confidence 334457788999988643 222345677889988665 69999999999998753 799999999997776653
No 402
>KOG1163|consensus
Probab=97.53 E-value=0.00028 Score=46.51 Aligned_cols=73 Identities=11% Similarity=0.048 Sum_probs=58.2
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhh
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
++++.+..+|+.||||.-...+. .-++..|..+...+.+.+.|..+..+....++-.+|||++..||++++.-
T Consensus 31 Iy~~~~i~~ge~VAiK~Es~~a~---hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLGPsLEdLfnf 103 (341)
T KOG1163|consen 31 IYLGISITSGEEVAIKLESSKAK---HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLGPSLEDLFNF 103 (341)
T ss_pred eeeeeeccCCceEEEEeecccCC---CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccCccHHHHHHH
Confidence 57888889999999998765432 23566788887776677788888888888889999999998899998764
No 403
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=97.53 E-value=0.00025 Score=40.98 Aligned_cols=60 Identities=10% Similarity=-0.026 Sum_probs=45.2
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
.+..+++|....... ...+..|+.++..+.++ ++++++++.+..++..|++|||++| ++.
T Consensus 20 ~~~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 20 KDEDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred cCCeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 346789998864332 45677888888775333 6888988888878899999999998 664
No 404
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=97.41 E-value=0.0017 Score=46.33 Aligned_cols=48 Identities=13% Similarity=0.011 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 38 HKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 38 ~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.+.+.+|+.++.. ..|++++.....+..++..+++|||++| +|.+++.
T Consensus 380 ~~~~~~E~~~l~~-l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~ 428 (535)
T PRK09605 380 TERTRAEARLLSE-ARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE 428 (535)
T ss_pred HHHHHHHHHHHHh-hcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH
Confidence 3568899999887 4899998877777777788999999999 9998763
No 405
>KOG0670|consensus
Probab=97.36 E-value=0.00021 Score=51.35 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=56.2
Q ss_pred EEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCC-----CCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 15 GLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSD-----CAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 15 ~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~-----hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
|.....|..||||+|..+ ......-+.|++||.++.. --|+++++..|...+++|+|+|-+.-+|-++|++.
T Consensus 451 a~D~~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~LslNLRevLKKy 527 (752)
T KOG0670|consen 451 ARDQARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKY 527 (752)
T ss_pred ccccCCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHh
Confidence 334456778999999743 3446677899999988542 34899999999999999999997777888888763
No 406
>PRK12274 serine/threonine protein kinase; Provisional
Probab=97.36 E-value=0.0016 Score=41.86 Aligned_cols=62 Identities=2% Similarity=-0.236 Sum_probs=44.0
Q ss_pred CCCEEEEEEEeecCCH---HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHH
Q psy13291 20 DPDSEWSFRITFTVNT---QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~---~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l 85 (89)
.+..++.+.+....-. .....+.+|+++|.++.+|++++++++. +..+++|||+.| +|.+.+
T Consensus 24 ~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~ 89 (218)
T PRK12274 24 GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRP 89 (218)
T ss_pred CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhh
Confidence 5666776666543221 1223578999999997677889998874 457999999999 887543
No 407
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=97.23 E-value=0.0061 Score=38.49 Aligned_cols=65 Identities=22% Similarity=0.359 Sum_probs=51.3
Q ss_pred CEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCC-ceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 22 DSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCA-HTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 22 ~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hp-niv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+|+|.+...... .....+.+|..++..+ .|+ +++.+++.+...+..+++++|+.+ ++.+++..
T Consensus 23 ~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 91 (384)
T COG0515 23 KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKK 91 (384)
T ss_pred cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHh
Confidence 66788888754322 2477889999998885 555 899999999778889999999999 88876653
No 408
>KOG0195|consensus
Probab=97.20 E-value=3.8e-05 Score=51.38 Aligned_cols=70 Identities=11% Similarity=0.067 Sum_probs=54.4
Q ss_pred EccCCCEEEEEEEeec-CCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 17 ARLDPDSEWSFRITFT-VNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 17 ~~~~~~~~AvK~i~~~-~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.++.|..+++|++... ......++|..|..-|.- +.||||....|++.++..+.++..||+. ||..+|..
T Consensus 209 grwqgndivakil~vr~~t~risrdfneefp~lri-fshpnilpvlgacnsppnlv~isq~mp~gslynvlhe 280 (448)
T KOG0195|consen 209 GRWQGNDIVAKILNVREVTARISRDFNEEFPALRI-FSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHE 280 (448)
T ss_pred ccccCcchhhhhhhhhhcchhhcchhhhhCcceee-ecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhc
Confidence 3455666777877642 333445678888888654 6999999999999999999999999999 99988854
No 409
>KOG0669|consensus
Probab=97.20 E-value=7e-06 Score=54.22 Aligned_cols=75 Identities=5% Similarity=0.014 Sum_probs=54.7
Q ss_pred ceeEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE--------CCEEEEEecchhccHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR--------EGDVWICMEVMDTSLD 82 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~--------~~~~~iv~E~~~~sL~ 82 (89)
|.+|.++.+|+.||+|.+-..+ ......+.++|+.+|.. +.|+|++.+...+.. ...+|+|+++|+.+|.
T Consensus 33 VFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~-lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLa 111 (376)
T KOG0669|consen 33 VFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQL-LKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLA 111 (376)
T ss_pred HHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHH-hcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHH
Confidence 4566777888889998774321 22234567889999987 599999888765543 2369999999999887
Q ss_pred HHHhh
Q psy13291 83 KFYTK 87 (89)
Q Consensus 83 ~~l~~ 87 (89)
.+|..
T Consensus 112 GlLsn 116 (376)
T KOG0669|consen 112 GLLSN 116 (376)
T ss_pred HHhcC
Confidence 77643
No 410
>smart00090 RIO RIO-like kinase.
Probab=97.16 E-value=0.0021 Score=41.49 Aligned_cols=69 Identities=7% Similarity=-0.192 Sum_probs=44.5
Q ss_pred cceeEE-EccCCCEEEEEEEeecCCH---------------------H--HHHHHHHHHHHHHhcCCC--CceeeEEeEE
Q psy13291 11 KPELGL-ARLDPDSEWSFRITFTVNT---------------------Q--EHKRLLTDLDICMRSSDC--AHTVQFYGAM 64 (89)
Q Consensus 11 ~~~l~~-~~~~~~~~AvK~i~~~~~~---------------------~--~~~~~~~E~~il~~~~~h--pniv~~~~~~ 64 (89)
.|+.|. +..+|+.+|+|.+...... . ....+..|..++..+ .+ ..++..++.
T Consensus 43 ~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-~~~~i~~p~~~~~- 120 (237)
T smart00090 43 NVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-YEAGVPVPKPIAW- 120 (237)
T ss_pred eEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-HhcCCCCCeeeEe-
Confidence 467777 6679999999999753210 0 112356899998886 33 233444432
Q ss_pred EECCEEEEEecchhc-cHHHH
Q psy13291 65 FREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 65 ~~~~~~~iv~E~~~~-sL~~~ 84 (89)
+..+++|||++| ++...
T Consensus 121 ---~~~~lV~E~~~g~~L~~~ 138 (237)
T smart00090 121 ---RRNVLVMEFIGGDGLPAP 138 (237)
T ss_pred ---cCceEEEEEecCCccccc
Confidence 235899999999 77543
No 411
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=97.08 E-value=0.00042 Score=49.72 Aligned_cols=20 Identities=0% Similarity=-0.248 Sum_probs=15.8
Q ss_pred ceeEEEccCCCEEEEEEEee
Q psy13291 12 PELGLARLDPDSEWSFRITF 31 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~ 31 (89)
|..|....+|+.||||++..
T Consensus 135 Vh~A~l~~~G~~VAVKV~rP 154 (537)
T PRK04750 135 VHFARLKDNGREVVVKVLRP 154 (537)
T ss_pred EEEEEECCCCCEEEEEEeCc
Confidence 45666666799999999964
No 412
>KOG0986|consensus
Probab=97.08 E-value=0.00023 Score=50.30 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=54.3
Q ss_pred ceeEEEccCCCEEEEEEEeecCCH--HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNT--QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~--~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
|+-|.-+.||.-+|.|.+...... .--.-.+.|-.||++ .+.|+||.+--+|.+.+.+++||..|+| +|.-
T Consensus 201 V~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~k-V~s~FiVslaYAfeTkd~LClVLtlMNGGDLkf 274 (591)
T KOG0986|consen 201 VCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEK-VSSPFIVSLAYAFETKDALCLVLTLMNGGDLKF 274 (591)
T ss_pred eeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHH-hccCcEEEEeeeecCCCceEEEEEeecCCceeE
Confidence 455666778888888887642111 112235789999988 4999999999999999999999999999 8754
No 413
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=97.02 E-value=0.0025 Score=39.62 Aligned_cols=68 Identities=10% Similarity=-0.094 Sum_probs=43.2
Q ss_pred ceeEEEccCCCEEEEEEEeecCCH---------------------HHHHHHHHHHHHHHhcCCCC--ceeeEEeEEEECC
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNT---------------------QEHKRLLTDLDICMRSSDCA--HTVQFYGAMFREG 68 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~---------------------~~~~~~~~E~~il~~~~~hp--niv~~~~~~~~~~ 68 (89)
|+.+.. .+|+.+|+|.+...... ........|..++..+ .|+ .++..++ .+
T Consensus 31 Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~v~~~~~----~~ 104 (198)
T cd05144 31 VYLALD-PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEGFPVPKPID----WN 104 (198)
T ss_pred EEEEEc-CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcCCCCCceee----cC
Confidence 455554 37999999988643211 0112356788887774 565 3444433 34
Q ss_pred EEEEEecchhc-cHHHHH
Q psy13291 69 DVWICMEVMDT-SLDKFY 85 (89)
Q Consensus 69 ~~~iv~E~~~~-sL~~~l 85 (89)
..+++|||++| +|..+.
T Consensus 105 ~~~lv~e~~~g~~L~~~~ 122 (198)
T cd05144 105 RHAVVMEYIDGVELYRVR 122 (198)
T ss_pred CceEEEEEeCCcchhhcc
Confidence 56899999999 887664
No 414
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.97 E-value=0.0024 Score=45.66 Aligned_cols=67 Identities=9% Similarity=0.195 Sum_probs=42.1
Q ss_pred cCCCEEEEEEEeecCCHHHHHH--------------HHHHHHHHHhcCCCCc-----eeeEEeEEEE--------CCEEE
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKR--------------LLTDLDICMRSSDCAH-----TVQFYGAMFR--------EGDVW 71 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~--------------~~~E~~il~~~~~hpn-----iv~~~~~~~~--------~~~~~ 71 (89)
..++.||+|.+...... ..++ ...|+.++..+ .|.+ ++++.+++.. .+..|
T Consensus 184 ~~~r~VAVK~l~~~~~~-~~~~fl~e~~~~~~~~e~~~vE~~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~ 261 (507)
T PLN03224 184 QKKRRVVLKRVNMDRQG-VRQDFLKTGTLAKGSAETGMVEAYMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQW 261 (507)
T ss_pred ccCceEEEEEecccchh-hHHHHHhhhhhhhcccchhHHHHHHHHHh-hcccchhhhhhhhhhhcccccccccccCCceE
Confidence 45578999998643221 1222 23456665554 4433 3556666543 35789
Q ss_pred EEecchhc-cHHHHHhh
Q psy13291 72 ICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 72 iv~E~~~~-sL~~~l~~ 87 (89)
+|+||+++ +|.+++..
T Consensus 262 LV~Ey~~~gsL~~~L~~ 278 (507)
T PLN03224 262 LVWKFESDATLGDALDG 278 (507)
T ss_pred EEEEcCCCCcHHHHHhh
Confidence 99999999 99998863
No 415
>KOG0671|consensus
Probab=96.85 E-value=0.0015 Score=45.17 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=55.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-C----ceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-A----HTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-p----niv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
+|.-|..+.++..+|+|+|..- ....+..+.|+.+|.++..+ | -++++.+.|...++++|++|.++.|+-+++
T Consensus 104 kV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFl 181 (415)
T KOG0671|consen 104 KVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFL 181 (415)
T ss_pred ceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHh
Confidence 4556667778999999999743 23355667799998885322 2 255666778889999999999887777777
Q ss_pred hhc
Q psy13291 86 TKV 88 (89)
Q Consensus 86 ~~~ 88 (89)
+.+
T Consensus 182 k~N 184 (415)
T KOG0671|consen 182 KEN 184 (415)
T ss_pred ccC
Confidence 654
No 416
>KOG1164|consensus
Probab=96.67 E-value=0.012 Score=39.40 Aligned_cols=75 Identities=11% Similarity=0.062 Sum_probs=52.0
Q ss_pred ceeEEEccCC-CEEEEEEEeecCCHHHHHHHHHHHHHHHhcC---CCCceeeEEeEE-EECCEEEEEecchhccHHHHHh
Q psy13291 12 PELGLARLDP-DSEWSFRITFTVNTQEHKRLLTDLDICMRSS---DCAHTVQFYGAM-FREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 12 ~~l~~~~~~~-~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~---~hpniv~~~~~~-~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
|+++....++ ..+|+|........... .+..|..++..+. +.+++..+++.+ ..+..-||||+++..||.++.+
T Consensus 34 V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G~sL~dl~~ 112 (322)
T KOG1164|consen 34 VYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLGPSLEDLRK 112 (322)
T ss_pred EEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccCccHHHHHH
Confidence 4566655554 56888887754222112 5666788877654 346889999888 4778999999988779999875
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 113 ~ 113 (322)
T KOG1164|consen 113 R 113 (322)
T ss_pred h
Confidence 4
No 417
>KOG0664|consensus
Probab=96.45 E-value=0.00011 Score=49.24 Aligned_cols=71 Identities=10% Similarity=0.134 Sum_probs=55.8
Q ss_pred eEEEccCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECC-----EEEEEecchhccHHHHH
Q psy13291 14 LGLARLDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREG-----DVWICMEVMDTSLDKFY 85 (89)
Q Consensus 14 l~~~~~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~-----~~~iv~E~~~~sL~~~l 85 (89)
.+....+|+.+|+|.+..-. +.....++++|+..|.- +.|.|++...+....+. ++|+++|+|..+|+.+|
T Consensus 71 sVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcf-FkHdNVLSaLDILQPph~dfFqEiYV~TELmQSDLHKII 147 (449)
T KOG0664|consen 71 SVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSS-FRHDNVLSLLDILQPANPSFFQELYVLTELMQSDLHKII 147 (449)
T ss_pred eccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHh-hccccHHHHHHhcCCCCchHHHHHHHHHHHHHhhhhhee
Confidence 44556789999999997532 23356789999999876 69999999988887753 68899999988887765
No 418
>KOG1243|consensus
Probab=96.27 E-value=0.012 Score=43.32 Aligned_cols=60 Identities=8% Similarity=0.077 Sum_probs=46.9
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
+.++..+.+...+.... ...+...+-+.-|+. +.||||++|++++...+..||++|-+..
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKt-lRHP~Il~yL~t~e~~~~~ylvTErV~P 93 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKT-LRHPNILSYLDTTEEEGTLYLVTERVRP 93 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhh-ccCchhhhhhhhhcccCceEEEeecccc
Confidence 44677888888876544 345556667777666 5999999999999999999999997765
No 419
>KOG1165|consensus
Probab=96.21 E-value=0.012 Score=40.52 Aligned_cols=73 Identities=10% Similarity=-0.008 Sum_probs=52.5
Q ss_pred eeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHhhc
Q psy13291 13 ELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 13 ~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
.++.+..+++.||||.-+.... .-++.-|-.....+.+.++|.+.|-....+-+-.+|||++..||++++..+
T Consensus 45 f~G~Nl~nne~VAIKfEPrkS~---APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLGPSLEDLFD~C 117 (449)
T KOG1165|consen 45 FLGKNLYNNEPVAIKFEPRKSE---APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLGPSLEDLFDLC 117 (449)
T ss_pred ecccccccCceEEEEeccccCC---cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhCcCHHHHHHHh
Confidence 3455667899999997765322 223445666666666889998876555556678899999888999998654
No 420
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=96.18 E-value=0.0053 Score=38.08 Aligned_cols=64 Identities=9% Similarity=-0.048 Sum_probs=40.8
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCC-CCceeeEEeEEEEC---CEEEEEecchhc-cHHHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSD-CAHTVQFYGAMFRE---GDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~-hpniv~~~~~~~~~---~~~~iv~E~~~~-sL~~~ 84 (89)
|..+++|.............+..|..++..+.. +.++.+++...... +..|++|||++| ++.+.
T Consensus 22 g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~ 90 (223)
T cd05154 22 GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDR 90 (223)
T ss_pred CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCC
Confidence 578899987543221124467788888877433 23455565554443 367899999999 77654
No 421
>KOG3741|consensus
Probab=96.03 E-value=0.014 Score=42.28 Aligned_cols=72 Identities=8% Similarity=0.082 Sum_probs=50.5
Q ss_pred ceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE----CCEEEEEecchhc--cHHHHH
Q psy13291 12 PELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR----EGDVWICMEVMDT--SLDKFY 85 (89)
Q Consensus 12 ~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~----~~~~~iv~E~~~~--sL~~~l 85 (89)
.+.+-+..+|..|++|++....+. .......-++.+++ +.|+|+|.|.++|.. ...+.++.+|.++ +|.++.
T Consensus 292 tyk~~s~~DG~~YvLkRlhg~r~~-~~nk~t~lve~wkk-l~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 292 TYKATSNVDGNAYVLKRLHGDRDQ-STNKDTSLVEAWKK-LCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred eEeeeeccCCceeeeeeecccccc-CcccchHHHHHHHH-hccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 355667788999999999432211 11122234567777 499999999998874 3479999999998 777653
No 422
>PHA02882 putative serine/threonine kinase; Provisional
Probab=95.87 E-value=0.14 Score=33.38 Aligned_cols=75 Identities=9% Similarity=-0.020 Sum_probs=43.4
Q ss_pred cceeEEEccC---CCEEEEEEEeecCCHHHHH----------HHHHHHHHHHhcCCCCceeeEEeEEEECC----EEEEE
Q psy13291 11 KPELGLARLD---PDSEWSFRITFTVNTQEHK----------RLLTDLDICMRSSDCAHTVQFYGAMFREG----DVWIC 73 (89)
Q Consensus 11 ~~~l~~~~~~---~~~~AvK~i~~~~~~~~~~----------~~~~E~~il~~~~~hpniv~~~~~~~~~~----~~~iv 73 (89)
.|+.|....+ +..+|+|...........+ ....+...+.. ..|+|++++++++.... ..+++
T Consensus 27 ~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~h~~i~~~~~~~~~~~~~~~~~~~~ 105 (294)
T PHA02882 27 CVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHN-IDHLGIPKYYGCGSFKRCRMYYRFIL 105 (294)
T ss_pred eEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhcc-CCCCCCCcEEEeeeEecCCceEEEEE
Confidence 4667776666 5667777654322211111 11222333333 58999999999876643 45788
Q ss_pred ecchhccHHHHHh
Q psy13291 74 MEVMDTSLDKFYT 86 (89)
Q Consensus 74 ~E~~~~sL~~~l~ 86 (89)
+|++..++.+++.
T Consensus 106 ~~~~~~~~~~~~~ 118 (294)
T PHA02882 106 LEKLVENTKEIFK 118 (294)
T ss_pred EehhccCHHHHHH
Confidence 8887665555543
No 423
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=95.86 E-value=0.025 Score=39.71 Aligned_cols=20 Identities=20% Similarity=0.283 Sum_probs=15.8
Q ss_pred CCEEEEEecchhc-cHHHHHh
Q psy13291 67 EGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 67 ~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.+..+|+|||++| +|.++..
T Consensus 230 ~~~~vLvmE~i~G~~L~~~~~ 250 (437)
T TIGR01982 230 TSERVLTMEWIDGIPLSDIAA 250 (437)
T ss_pred cCCceEEEEeECCcccccHHH
Confidence 3457899999999 8887653
No 424
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=95.80 E-value=0.12 Score=33.46 Aligned_cols=67 Identities=12% Similarity=-0.031 Sum_probs=43.3
Q ss_pred CCCEEEEEEEeecC------------CHHHHHHHHHHHHHHHhcCCCCce--eeEEeEEEEC-C---EEEEEecchhc--
Q psy13291 20 DPDSEWSFRITFTV------------NTQEHKRLLTDLDICMRSSDCAHT--VQFYGAMFRE-G---DVWICMEVMDT-- 79 (89)
Q Consensus 20 ~~~~~AvK~i~~~~------------~~~~~~~~~~E~~il~~~~~hpni--v~~~~~~~~~-~---~~~iv~E~~~~-- 79 (89)
.+..+++|...... +......+.+|+.++..+ .|+++ +..++..... . ..+++|||++|
T Consensus 54 ~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~ 132 (239)
T PRK01723 54 PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVVRHGLFYRADILIERIEGAR 132 (239)
T ss_pred CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeeeecCcceeeeEEEEecCCCC
Confidence 36678888775311 112235678899998874 77664 6666554332 2 34699999996
Q ss_pred cHHHHHhh
Q psy13291 80 SLDKFYTK 87 (89)
Q Consensus 80 sL~~~l~~ 87 (89)
+|.+++..
T Consensus 133 ~L~~~l~~ 140 (239)
T PRK01723 133 DLVALLQE 140 (239)
T ss_pred CHHHHHhc
Confidence 88887754
No 425
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=95.60 E-value=0.035 Score=40.18 Aligned_cols=71 Identities=8% Similarity=0.001 Sum_probs=41.5
Q ss_pred cceeEEEccC----CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeE------EEECCEEEEEecchhc-
Q psy13291 11 KPELGLARLD----PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGA------MFREGDVWICMEVMDT- 79 (89)
Q Consensus 11 ~~~l~~~~~~----~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~------~~~~~~~~iv~E~~~~- 79 (89)
.|+++....+ +..+|+|.+...... +....| .+ ... .+.++..+... ...++..|+++||+++
T Consensus 147 ~VYka~~~~~~~~~~~~vAvK~~~~~~~~---e~~~~e-~l-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~LV~ey~~~g 220 (566)
T PLN03225 147 VVYKASLVNKQSKKEGKYVLKKATEYGAV---EIWMNE-RV-RRA-CPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGES 220 (566)
T ss_pred EEEEEEEcCCccccCcEEEEEEecccchh---HHHHHH-HH-Hhh-chhhHHHHHHhhhcccccccCCceEEEEEecCCC
Confidence 4778888788 899999988643221 111111 11 111 22222222211 1345689999999999
Q ss_pred cHHHHHhh
Q psy13291 80 SLDKFYTK 87 (89)
Q Consensus 80 sL~~~l~~ 87 (89)
+|.+++..
T Consensus 221 sL~~~l~~ 228 (566)
T PLN03225 221 TLADLMQS 228 (566)
T ss_pred cHHHHHHh
Confidence 99988764
No 426
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=95.47 E-value=0.031 Score=33.36 Aligned_cols=59 Identities=5% Similarity=-0.146 Sum_probs=35.8
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
.+..+++|........ ...+..|..++..+.+...+.++++.. .+.-+++|||++| ++.
T Consensus 20 ~~~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 20 ANKKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred CCeEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 4778999987543211 223456788877643333344455443 3345799999999 775
No 427
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=95.05 E-value=0.16 Score=32.43 Aligned_cols=60 Identities=5% Similarity=-0.047 Sum_probs=40.8
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
+..+.+|..+... ..++..|+.++..+..+-.+.++++....++..+++||+++| ++...
T Consensus 22 ~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~ 82 (244)
T cd05150 22 NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL 82 (244)
T ss_pred CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence 3567777665321 234566888876654444566677777666778999999999 88754
No 428
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=94.64 E-value=0.15 Score=31.02 Aligned_cols=20 Identities=15% Similarity=-0.095 Sum_probs=15.3
Q ss_pred cceeEEEccCCCEEEEEEEee
Q psy13291 11 KPELGLARLDPDSEWSFRITF 31 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~ 31 (89)
.|+.+... +|+.+|+|++..
T Consensus 12 ~Vy~a~~~-~~~~vavKv~~~ 31 (187)
T cd05119 12 DVYLALDG-DGEPVAVKIYRT 31 (187)
T ss_pred eEEEEECC-CCCEEEEEEEec
Confidence 46667655 799999999875
No 429
>PLN02876 acyl-CoA dehydrogenase
Probab=94.51 E-value=0.13 Score=38.82 Aligned_cols=59 Identities=8% Similarity=0.027 Sum_probs=37.7
Q ss_pred EEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCce--eeEEeEEEEC---CEEEEEecchhc-cH
Q psy13291 23 SEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHT--VQFYGAMFRE---GDVWICMEVMDT-SL 81 (89)
Q Consensus 23 ~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpni--v~~~~~~~~~---~~~~iv~E~~~~-sL 81 (89)
.+++++.+..........+.+|..+|..+..|+++ .+.++.+.+. +..|++|||++| .+
T Consensus 67 ~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 67 RYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred eEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCccc
Confidence 45666554322111234677899998775345554 6667666554 468999999999 64
No 430
>KOG1024|consensus
Probab=93.58 E-value=0.095 Score=37.08 Aligned_cols=60 Identities=8% Similarity=0.112 Sum_probs=44.7
Q ss_pred EEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhc-cHHHHHhh
Q psy13291 27 FRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 27 K~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
|.+..+++......++.|.-.|.. ..|||+.+..++... .+.+++++.++.. +|..+|+.
T Consensus 320 KTvk~~AS~iQv~~~L~es~lly~-~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~ 381 (563)
T KOG1024|consen 320 KTVKQHASQIQVNLLLQESMLLYG-ASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQI 381 (563)
T ss_pred HHHHhcccHHHHHHHHHHHHHHhc-CcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHH
Confidence 333333344445667888888766 489999999988765 4689999999998 99999873
No 431
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=91.49 E-value=1 Score=28.63 Aligned_cols=62 Identities=16% Similarity=-0.005 Sum_probs=41.5
Q ss_pred ccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 18 RLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
.+.|..+|+|.-.. +.....+..|..+|..+.+-....++|.+... ++.|||++| .|.++-.
T Consensus 42 ~~~~~~~a~Kvrr~---ds~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i~G~~L~~~~~ 104 (201)
T COG2112 42 EWRGGEVALKVRRR---DSPRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYIDGRPLGKLEI 104 (201)
T ss_pred eccCceEEEEEecC---CcchhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhhcCcchhhhhh
Confidence 45777888886653 23356788899998875444444555544333 355999999 9887654
No 432
>KOG1023|consensus
Probab=91.19 E-value=0.22 Score=35.72 Aligned_cols=36 Identities=19% Similarity=0.214 Sum_probs=33.7
Q ss_pred CCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 52 SDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 52 ~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
+.|.|+.+|+|.+..+....++-+||.. +|.+++..
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc
Confidence 4899999999999999999999999999 99999865
No 433
>KOG1166|consensus
Probab=90.42 E-value=0.14 Score=39.54 Aligned_cols=71 Identities=6% Similarity=-0.177 Sum_probs=48.3
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHH--HHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHh
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEH--KRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~--~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~ 86 (89)
+||.|.+.. |+.+|+|.-......+.. .++..-+. + .--|.|+.+..++..++.-++++||.+. ||.+++.
T Consensus 713 ~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk-~---~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N 786 (974)
T KOG1166|consen 713 SVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLK-P---QMLPSIMHISSAHVFQNASVLVSEYSPYGTLLDLIN 786 (974)
T ss_pred EEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhc-h---hhhcchHHHHHHHccCCcceeeeeccccccHHHhhc
Confidence 467777666 999999988755444321 22221111 1 1235677777888888999999999999 9999875
No 434
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.41 E-value=0.85 Score=29.15 Aligned_cols=49 Identities=14% Similarity=0.038 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 38 HKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 38 ~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
..+..+|..++.+.. --.|..-.-++.+++...|+|||.+| .|-+++..
T Consensus 43 r~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~ 92 (204)
T COG3642 43 RERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEE 92 (204)
T ss_pred HHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHh
Confidence 356778999988743 22333333445667888999999999 88877754
No 435
>KOG0603|consensus
Probab=88.04 E-value=0.078 Score=38.80 Aligned_cols=64 Identities=8% Similarity=0.021 Sum_probs=47.2
Q ss_pred ccCCCEEEEEEEeecCC-HHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cH
Q psy13291 18 RLDPDSEWSFRITFTVN-TQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SL 81 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~-~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL 81 (89)
...|..+|.|....... .........|..++....+||++++++-.++.++..+++++|..| .+
T Consensus 19 ~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~l 84 (612)
T KOG0603|consen 19 ADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDL 84 (612)
T ss_pred ccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchh
Confidence 35677889888865311 111114455777777766799999999999999999999999998 54
No 436
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=87.86 E-value=3.7 Score=28.91 Aligned_cols=61 Identities=13% Similarity=-0.060 Sum_probs=37.1
Q ss_pred CEEEEEEEeec----CC--HHHHHHHHHHHHHHHhcCCC--CceeeEEeEEEECCEEEEEecchhc--cHHHH
Q psy13291 22 DSEWSFRITFT----VN--TQEHKRLLTDLDICMRSSDC--AHTVQFYGAMFREGDVWICMEVMDT--SLDKF 84 (89)
Q Consensus 22 ~~~AvK~i~~~----~~--~~~~~~~~~E~~il~~~~~h--pniv~~~~~~~~~~~~~iv~E~~~~--sL~~~ 84 (89)
+.+.||+-... .. ....++...|.+.|.....+ +++++.+.+ +++..+++|||+++ .+.+.
T Consensus 52 ~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lVME~L~~~~~lr~~ 122 (401)
T PRK09550 52 KSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTVMEDLSDHKILRKG 122 (401)
T ss_pred eEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEEEecCCCccHHHHH
Confidence 47899986421 11 11345667788887763322 346666554 44668899999998 45443
No 437
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=87.75 E-value=6.1 Score=26.16 Aligned_cols=69 Identities=14% Similarity=-0.047 Sum_probs=39.5
Q ss_pred EccCCCEEEEEEEeecCCHHHH----------HHHHHHHHHHHhcC--CCCceeeEEeEEEE-----CCEEEEEecchhc
Q psy13291 17 ARLDPDSEWSFRITFTVNTQEH----------KRLLTDLDICMRSS--DCAHTVQFYGAMFR-----EGDVWICMEVMDT 79 (89)
Q Consensus 17 ~~~~~~~~AvK~i~~~~~~~~~----------~~~~~E~~il~~~~--~hpniv~~~~~~~~-----~~~~~iv~E~~~~ 79 (89)
....|+.+.+|.-....-.... ..+.+|...+..+. +.| ++...+++.. ....++++|++++
T Consensus 41 ~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIp-tP~pVa~~e~~~~~~~~~s~LVte~l~~ 119 (268)
T PRK15123 41 FELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVD-TMTGVAFGERGSNPATRTSFIITEDLAP 119 (268)
T ss_pred EEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCC-CCCeeEEEEecCCCccceeEEEEeeCCC
Confidence 3457788999976432211111 13567777766542 333 2222222222 2368899999999
Q ss_pred --cHHHHHh
Q psy13291 80 --SLDKFYT 86 (89)
Q Consensus 80 --sL~~~l~ 86 (89)
+|.+++.
T Consensus 120 ~~sL~~~~~ 128 (268)
T PRK15123 120 TISLEDYCA 128 (268)
T ss_pred CccHHHHHH
Confidence 8988875
No 438
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=87.42 E-value=4.9 Score=24.68 Aligned_cols=59 Identities=12% Similarity=0.039 Sum_probs=37.7
Q ss_pred CEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEE---CCEEEEEecchhc-cHHH
Q psy13291 22 DSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFR---EGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 22 ~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~---~~~~~iv~E~~~~-sL~~ 83 (89)
..+++|..... .....+..|..++..+..+ ..+.+++..... ....+++|++++| ++..
T Consensus 21 ~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 21 GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD 84 (239)
T ss_dssp SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence 57888876532 3456677788887664333 235666654433 3468999999999 8776
No 439
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=85.21 E-value=3.1 Score=26.63 Aligned_cols=56 Identities=7% Similarity=-0.002 Sum_probs=36.9
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCC-ceeeEEeEEEECCEEEEEecchhc
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCA-HTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hp-niv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
|..+++|.-..... ...+.+|.+++..+.... .+.+.++.....+..+++||+++|
T Consensus 22 ~~~~VlR~~~~~~~---~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 22 TGKWMLKLYNPGFD---KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred CCCEEEEeCCCCCC---HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 44566776653222 344677888877643332 256667777777788999999999
No 440
>KOG0576|consensus
Probab=84.06 E-value=0.43 Score=35.82 Aligned_cols=38 Identities=16% Similarity=0.285 Sum_probs=32.4
Q ss_pred HHHHHHHHHhcCCCCc-eeeEEeEEEECCEEEEEecchhc
Q psy13291 41 LLTDLDICMRSSDCAH-TVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 41 ~~~E~~il~~~~~hpn-iv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
..-++++|.+ .+||| .+.+++.+..++..||.++++.+
T Consensus 280 ~rl~~eLLdK-~n~P~~~v~~~~d~~~E~~~~i~~~i~s~ 318 (829)
T KOG0576|consen 280 RRLAIELLDK-VNNPNPVVRYLEDYDGEDYLWIPMRICST 318 (829)
T ss_pred hHHHHHHHHH-ccCCCCcccccccCCcccccchhhhhhcC
Confidence 3447888888 59999 88888899999999999999986
No 441
>KOG3087|consensus
Probab=81.41 E-value=9.7 Score=24.70 Aligned_cols=71 Identities=10% Similarity=0.005 Sum_probs=42.8
Q ss_pred EEccCCCEEEEEEEee-c--C---CH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc--cHHHHHh
Q psy13291 16 LARLDPDSEWSFRITF-T--V---NT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT--SLDKFYT 86 (89)
Q Consensus 16 ~~~~~~~~~AvK~i~~-~--~---~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~--sL~~~l~ 86 (89)
....+|+.+.||.=.. . . +. -...+..+|...|.++. --.|.--.-.+.+...-.|.|||.+| ++.+++.
T Consensus 25 ~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~ 103 (229)
T KOG3087|consen 25 RGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFIL 103 (229)
T ss_pred eeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeEEEEeccchhHHHHHHH
Confidence 3456788777775432 1 1 11 12456788999987742 22333323344556667899999999 7877765
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 104 ~ 104 (229)
T KOG3087|consen 104 S 104 (229)
T ss_pred H
Confidence 3
No 442
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=80.87 E-value=3.8 Score=25.80 Aligned_cols=56 Identities=13% Similarity=0.033 Sum_probs=30.6
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
+..+.+|..... ... ..+..+|..++..+..+...++.++.+. + .+++||++| ++.
T Consensus 24 ~~~~vlR~~~~~-~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~--~~l~e~i~G~~l~ 80 (235)
T cd05157 24 QDAVLVRVYGNK-TEL-IIDRERELRIHKLLSKHGLAPKLYATFQ--N--GLIYEFIPGRTLE 80 (235)
T ss_pred CCeEEEEEccCC-ccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC--C--cEEEEeeCCCcCC
Confidence 456778855422 111 1122357777666434444455554332 2 489999999 753
No 443
>PRK10593 hypothetical protein; Provisional
Probab=79.31 E-value=4.3 Score=27.08 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhcCCC--CceeeEEeEEEE---CCEEEEEecchhc-cH
Q psy13291 39 KRLLTDLDICMRSSDC--AHTVQFYGAMFR---EGDVWICMEVMDT-SL 81 (89)
Q Consensus 39 ~~~~~E~~il~~~~~h--pniv~~~~~~~~---~~~~~iv~E~~~~-sL 81 (89)
..+..|...|..+..+ -.+.+.++.+.. .+..+|+||+++| ++
T Consensus 52 ~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 52 GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 4567788888765443 357777776654 3679999999998 75
No 444
>KOG0601|consensus
Probab=76.08 E-value=1.2 Score=32.38 Aligned_cols=64 Identities=8% Similarity=-0.130 Sum_probs=45.2
Q ss_pred cCCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 19 LDPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
..+-.|++|.+.... .......-+.|+.+...+..|.+++.++..+......||-.|||++ ++.
T Consensus 289 ~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~ 354 (524)
T KOG0601|consen 289 EGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSS 354 (524)
T ss_pred CCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchh
Confidence 456678888776432 2212222355666666667899999999999998888899999988 544
No 445
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=74.58 E-value=19 Score=23.61 Aligned_cols=65 Identities=14% Similarity=0.138 Sum_probs=34.9
Q ss_pred ccceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeE------EEECCEEEEEecchhc-cH
Q psy13291 10 KKPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGA------MFREGDVWICMEVMDT-SL 81 (89)
Q Consensus 10 ~~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~------~~~~~~~~iv~E~~~~-sL 81 (89)
+.++.+.+ ++..+++|..... . ..+..|...+..+..+ ..++++..+ ...++..|+++||++| ++
T Consensus 10 ~~v~~v~t--~~g~~~LK~~~~~--~---~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~ 82 (313)
T TIGR02906 10 RNVYKVET--DSGNKCLKKINYP--P---ERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGREC 82 (313)
T ss_pred ccEEEEEe--CCCCeEEEEcCCC--H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCcCC
Confidence 45666653 3346899987522 1 2233344444332111 134444322 2336789999999999 65
No 446
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=74.24 E-value=14 Score=27.08 Aligned_cols=18 Identities=17% Similarity=0.233 Sum_probs=14.5
Q ss_pred CCEEEEEecchhc-cHHHH
Q psy13291 67 EGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 67 ~~~~~iv~E~~~~-sL~~~ 84 (89)
.+.-.++|||++| .++++
T Consensus 238 t~~~VLtmE~i~Gi~i~d~ 256 (517)
T COG0661 238 TTRRVLTMEWIDGIKISDI 256 (517)
T ss_pred cCCcEEEEEeeCCEecccH
Confidence 4556799999999 87776
No 447
>KOG0590|consensus
Probab=72.17 E-value=0.83 Score=33.64 Aligned_cols=65 Identities=17% Similarity=0.112 Sum_probs=44.4
Q ss_pred CCCEEEEEEEeecC-CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHHHH
Q psy13291 20 DPDSEWSFRITFTV-NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLDKF 84 (89)
Q Consensus 20 ~~~~~AvK~i~~~~-~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~~~ 84 (89)
+...+|.+.+.... ..........|..+=..+..|+|++.+++.....+..|+++||.+| ++-+.
T Consensus 45 ~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~ 111 (601)
T KOG0590|consen 45 PESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSK 111 (601)
T ss_pred CcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccc
Confidence 33456677665443 2233445555666633332499999999999999999999999998 65443
No 448
>KOG1093|consensus
Probab=71.16 E-value=12 Score=27.96 Aligned_cols=49 Identities=14% Similarity=0.120 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhcCCCCceeeEEeEEEE-CCEEEEEecchhccHHHHHhhc
Q psy13291 39 KRLLTDLDICMRSSDCAHTVQFYGAMFR-EGDVWICMEVMDTSLDKFYTKV 88 (89)
Q Consensus 39 ~~~~~E~~il~~~~~hpniv~~~~~~~~-~~~~~iv~E~~~~sL~~~l~~~ 88 (89)
-+++-..+.++. ..|+|...+.+.-.. .....+|||+++.|+++++..+
T Consensus 27 ~~ilgr~~~lkt-l~~~~l~~yl~~~r~~~~r~IVV~e~~~~Sled~~~~~ 76 (725)
T KOG1093|consen 27 IQILGRFQYLKS-LQHDNLCQYLDFSRGKHERVIVVMEHYTMSLEDILKTG 76 (725)
T ss_pred HHHhhhhHHHHh-hcCccceeeEeeecCccceEEEEehhhccchHHHHHhc
Confidence 345666778766 599999998776544 4579999999998999988754
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=69.57 E-value=5.5 Score=25.01 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhcCCCC-ceeeEEeEEEECCEEEEEecchh--c-cHHHH
Q psy13291 39 KRLLTDLDICMRSSDCA-HTVQFYGAMFREGDVWICMEVMD--T-SLDKF 84 (89)
Q Consensus 39 ~~~~~E~~il~~~~~hp-niv~~~~~~~~~~~~~iv~E~~~--~-sL~~~ 84 (89)
.....|...|.++.... ++++.++. . .-.|+|||++ | .+..+
T Consensus 53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~--~--~~~ivME~I~~~G~~~~~l 98 (188)
T PF01163_consen 53 EWAKKEFRNLKRLYEAGVPVPKPYDY--N--RNVIVMEYIGEDGVPLPRL 98 (188)
T ss_dssp HHHHHHHHHHHHCCCTT-SS--EEEE--E--TTEEEEE--EETTEEGGCH
T ss_pred HHHHHHHHHHHHHHHCCccCCcEEEE--e--CCEEEEEecCCCccchhhH
Confidence 35678999999865442 56666533 2 3369999999 7 55443
No 450
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=69.53 E-value=31 Score=23.15 Aligned_cols=57 Identities=7% Similarity=-0.034 Sum_probs=31.7
Q ss_pred cCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhc--CCCCceeeEEeEEEECCEEEEEecchhc
Q psy13291 19 LDPDSEWSFRITFTVNTQEHKRLLTDLDICMRS--SDCAHTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 19 ~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~--~~hpniv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
.++..+.+|.-..... .-+..|.+-|..+ ..--.+++.++.....+..|++|||++.
T Consensus 38 ~~~~~~FvK~~~~~~~----~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~ 96 (288)
T PF03881_consen 38 TDGGSYFVKVNSESGR----DMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM 96 (288)
T ss_dssp TTS-EEEEEEEEGGGC----CHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred CCCccEEEEecChhhH----HHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence 5677889998773322 2344455555543 2344577788888777778999999875
No 451
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=69.06 E-value=30 Score=22.71 Aligned_cols=16 Identities=19% Similarity=0.341 Sum_probs=13.0
Q ss_pred CEEEEEecchhc-cHHH
Q psy13291 68 GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 68 ~~~~iv~E~~~~-sL~~ 83 (89)
...+++|||++| .|.+
T Consensus 116 ~~~~ll~EYIeG~~l~d 132 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELND 132 (229)
T ss_pred eEEEEEEEEecCeeccc
Confidence 467899999999 7754
No 452
>KOG0590|consensus
Probab=67.62 E-value=1.1 Score=33.12 Aligned_cols=45 Identities=11% Similarity=0.062 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHHh
Q psy13291 41 LLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 41 ~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l~ 86 (89)
+..|.-+ ...+.|||++.....+.......-.||||+++|-.++.
T Consensus 368 i~sE~~i-~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~Dlf~~~~ 412 (601)
T KOG0590|consen 368 ITSEFCI-GSSLSHPNIIETLDIVQEIDGILQSMEYCPYDLFSLVM 412 (601)
T ss_pred hhhheee-cccccCCchhhhHHHHhhcccchhhhhcccHHHHHHHh
Confidence 4445555 44469999988777666655555559999985555443
No 453
>KOG4158|consensus
Probab=67.01 E-value=4.7 Score=29.08 Aligned_cols=35 Identities=11% Similarity=0.266 Sum_probs=25.3
Q ss_pred CCCCceeeEEeEEEEC---------------------------CEEEEEecchhccHHHHHh
Q psy13291 52 SDCAHTVQFYGAMFRE---------------------------GDVWICMEVMDTSLDKFYT 86 (89)
Q Consensus 52 ~~hpniv~~~~~~~~~---------------------------~~~~iv~E~~~~sL~~~l~ 86 (89)
-.|||||++++.|.+. -.+|++|.-.+.+|.+++-
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~ 334 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLW 334 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHh
Confidence 3699999999887652 1578888766667776653
No 454
>KOG1266|consensus
Probab=61.15 E-value=1.9 Score=30.20 Aligned_cols=35 Identities=23% Similarity=0.256 Sum_probs=28.6
Q ss_pred CCCceeeEEeEEEEC-----CEEEEEecchhc-cHHHHHhh
Q psy13291 53 DCAHTVQFYGAMFRE-----GDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 53 ~hpniv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~l~~ 87 (89)
.|.|+++++.++.+. ..+.++.|||.. ++.++|++
T Consensus 125 vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkr 165 (458)
T KOG1266|consen 125 VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKR 165 (458)
T ss_pred HHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHH
Confidence 699999998777552 367788899999 99999986
No 455
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=60.60 E-value=11 Score=24.15 Aligned_cols=58 Identities=10% Similarity=-0.087 Sum_probs=30.3
Q ss_pred CCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 20 DPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
+|..+.+|...... ....-....|..++..+..+.-..++++.. + -++++||++| .+.
T Consensus 18 ~~~~~vlR~~~~~~-~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~--~~~v~e~i~G~~~~ 76 (256)
T TIGR02721 18 PGISFVWRPQSPVC-KALGVDRQREYQILQALSALGLAPKPILVN--E--HWLLVEWLEGEVIT 76 (256)
T ss_pred CCccEEEeeCCccc-ccccCcHHHHHHHHHHHHhcCCCCceEEEe--C--CEEEEEeccCcccc
Confidence 45567777543221 111012356777776653332233333332 2 3689999999 654
No 456
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=60.04 E-value=42 Score=21.29 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=26.1
Q ss_pred CCCceeeEEeEEEECCEEEEEecchh------c-cHHHHHhh
Q psy13291 53 DCAHTVQFYGAMFREGDVWICMEVMD------T-SLDKFYTK 87 (89)
Q Consensus 53 ~hpniv~~~~~~~~~~~~~iv~E~~~------~-sL~~~l~~ 87 (89)
.+.+|.+++|...++--+-+++|... . ||+++++.
T Consensus 75 ~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~ 116 (199)
T PF10707_consen 75 DWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE 116 (199)
T ss_pred cccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc
Confidence 58899999999998876677776543 2 67777753
No 457
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.11 E-value=18 Score=24.27 Aligned_cols=42 Identities=10% Similarity=0.041 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhc--CCCCceeeEEeEEEECCEEEEEecchhc
Q psy13291 38 HKRLLTDLDICMRS--SDCAHTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 38 ~~~~~~E~~il~~~--~~hpniv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
.+-+..|+.-|..+ .+.-.+.+.+......++.|+||||++.
T Consensus 52 ~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~ 95 (286)
T COG3001 52 LSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPT 95 (286)
T ss_pred HHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccC
Confidence 44455566555432 1445677788888889999999999986
No 458
>KOG1033|consensus
Probab=58.15 E-value=2.3 Score=30.89 Aligned_cols=46 Identities=13% Similarity=0.216 Sum_probs=36.1
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEEC
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFRE 67 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~ 67 (89)
+-.+|||.|............++|..-+.. +.||++++++..|...
T Consensus 74 ~~~~avkritlkn~e~s~~rvl~~~~s~a~-feh~g~~~~~ha~~~~ 119 (516)
T KOG1033|consen 74 ENKYAVKRITLKNREESRSRVLREVSSLAE-FEHPGIKRYFHAWYER 119 (516)
T ss_pred chhhHHHHhcccchhhhhhhhhccccchhh-hcccchhhheeceecC
Confidence 346899999766555567778888888777 5999999999888764
No 459
>PLN00181 protein SPA1-RELATED; Provisional
Probab=57.44 E-value=1.9 Score=32.45 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=25.5
Q ss_pred CC-CceeeEEeEE-------EECCEEEEEecchhccHHHHHhh
Q psy13291 53 DC-AHTVQFYGAM-------FREGDVWICMEVMDTSLDKFYTK 87 (89)
Q Consensus 53 ~h-pniv~~~~~~-------~~~~~~~iv~E~~~~sL~~~l~~ 87 (89)
.| +||.+++++| .....+..++||++++|.++|..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~ 72 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDN 72 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhc
Confidence 45 6788888877 23346788899887799988853
No 460
>PF01797 Y1_Tnp: Transposase IS200 like; InterPro: IPR002686 Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This entry represents a domain found in transposases for IS200 from Escherichia coli []. More information about these proteins can be found at Protein of the Month: Transposase [].; GO: 0003677 DNA binding, 0004803 transposase activity, 0006313 transposition, DNA-mediated; PDB: 2F5G_B 2F4F_B 2EC2_F 2XM3_C 2XQC_D 2XO6_A 2XMA_E 2VJV_B 2VIH_B 2VJU_A ....
Probab=57.28 E-value=33 Score=19.21 Aligned_cols=31 Identities=13% Similarity=0.286 Sum_probs=24.9
Q ss_pred eeeEEeEEEECCEEEEEecchhc-cHHHHHhh
Q psy13291 57 TVQFYGAMFREGDVWICMEVMDT-SLDKFYTK 87 (89)
Q Consensus 57 iv~~~~~~~~~~~~~iv~E~~~~-sL~~~l~~ 87 (89)
=+.+++....++++.++++..+. ++.++++.
T Consensus 39 ~~~i~~~~vm~nHvHllv~~~~~~~is~~~~~ 70 (121)
T PF01797_consen 39 GIEIIAFVVMPNHVHLLVSIPPKQSISKFMQR 70 (121)
T ss_dssp TEEEEEEEEETTEEEEEEEE-TTS-HHHHHHH
T ss_pred cceeeeecccCcccceeeeecccccchheeec
Confidence 47788888999999999998888 89988865
No 461
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=55.79 E-value=20 Score=23.35 Aligned_cols=58 Identities=10% Similarity=-0.081 Sum_probs=31.7
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCC-ceeeEEeE------EEECCEEEEEecchhc-cHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCA-HTVQFYGA------MFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hp-niv~~~~~------~~~~~~~~iv~E~~~~-sL~ 82 (89)
+..+++|.... .+ ...+..|..++..+..+. .+.+.+.. ...++..+++++|++| +++
T Consensus 37 ~~~~vLr~~~~-~~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G~~~~ 102 (296)
T cd05153 37 SGRYVLTLFEK-VS---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAGEHLT 102 (296)
T ss_pred CCcEEEEEcCC-CC---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCCCCCC
Confidence 34577777653 11 234555666655532221 24444321 2335678999999999 653
No 462
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=55.33 E-value=18 Score=22.91 Aligned_cols=46 Identities=7% Similarity=-0.039 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhcCCC-C-ceeeEEeEEEEC---CEEEEEecchhc-cHHH
Q psy13291 38 HKRLLTDLDICMRSSDC-A-HTVQFYGAMFRE---GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 38 ~~~~~~E~~il~~~~~h-p-niv~~~~~~~~~---~~~~iv~E~~~~-sL~~ 83 (89)
...+..|..+|..+..+ + .+...++..... +..|++||+++| ++.+
T Consensus 32 ~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~~ 83 (235)
T cd05155 32 AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETATA 83 (235)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCCc
Confidence 44678899888764333 1 233344333222 245899999999 7753
No 463
>KOG0601|consensus
Probab=52.80 E-value=5.1 Score=29.29 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=46.1
Q ss_pred ccCCCEEEEEEEeecCCH-HHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHH
Q psy13291 18 RLDPDSEWSFRITFTVNT-QEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKF 84 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~~~-~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~ 84 (89)
+.++..+|+|.-..-... .....=.+|+.-.+..-.|+|.++.+..+...+..|+-+|+|..++..+
T Consensus 140 ~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~~sl~~~ 207 (524)
T KOG0601|consen 140 SESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCGESLQSY 207 (524)
T ss_pred ccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeeccccchhHHh
Confidence 567788898884432111 1122223455555565689999999999999999999999998855544
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=51.86 E-value=19 Score=22.86 Aligned_cols=33 Identities=6% Similarity=0.019 Sum_probs=23.1
Q ss_pred HHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhc
Q psy13291 43 TDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 43 ~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
.|...|.++... -+++..++. ..-+|+|||+.+
T Consensus 75 kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~ 108 (197)
T cd05146 75 KEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGD 108 (197)
T ss_pred HHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCC
Confidence 789888875433 355565543 567889999986
No 465
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=49.93 E-value=62 Score=20.20 Aligned_cols=48 Identities=13% Similarity=0.042 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHhcC--CCCceeeEEeEEEEC----CEEEEEecchhc--cHHHHHhh
Q psy13291 39 KRLLTDLDICMRSS--DCAHTVQFYGAMFRE----GDVWICMEVMDT--SLDKFYTK 87 (89)
Q Consensus 39 ~~~~~E~~il~~~~--~hpniv~~~~~~~~~----~~~~iv~E~~~~--sL~~~l~~ 87 (89)
.+..+|...+..+. +=| +++..++.... ...++++|++++ +|.+++..
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~-tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~ 111 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIP-TPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQ 111 (206)
T ss_pred hHHHHHHHHHHHHHHcCCC-CCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHh
Confidence 34566666655432 222 33333333331 257899999998 89998875
No 466
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=48.35 E-value=20 Score=23.50 Aligned_cols=56 Identities=16% Similarity=0.073 Sum_probs=31.6
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
+..+.++...... .......+|..++..+..+.-..++++.+. + ++++||++| ++.
T Consensus 29 ~~~~vlRi~~~~~--~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~i~G~~l~ 85 (302)
T cd05156 29 PRKVLLRVYGQSV--ELLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEFIPSRTLT 85 (302)
T ss_pred CCeEEEEEecCCC--cceechHHHHHHHHHHHhCCCCCceEEEeC-C---CchhheeCCCcCC
Confidence 5677888754321 112344567777665433333445555443 2 468999999 654
No 467
>KOG1035|consensus
Probab=45.05 E-value=16 Score=29.75 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=19.6
Q ss_pred EECCEEEEEecchhc-cHHHHHhhc
Q psy13291 65 FREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 65 ~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.....+||-||||+. ++.++++++
T Consensus 666 q~~~~LYIQMEyCE~~ll~~iI~~N 690 (1351)
T KOG1035|consen 666 QKPLILYIQMEYCEKTLLRDIIRRN 690 (1351)
T ss_pred ccceEEEEEHhhhhhhHHHHHHHhc
Confidence 335689999999999 899888764
No 468
>KOG1240|consensus
Probab=43.67 E-value=5.1 Score=32.27 Aligned_cols=66 Identities=6% Similarity=0.046 Sum_probs=42.4
Q ss_pred ccCCCEEEEEEEeecC---CHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhccHHHHH
Q psy13291 18 RLDPDSEWSFRITFTV---NTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDTSLDKFY 85 (89)
Q Consensus 18 ~~~~~~~AvK~i~~~~---~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~l 85 (89)
+.....+.+|++-... +.....+.+.|+.+ . +..+||+++|.-....+-..|++.+|...+|.+-|
T Consensus 43 k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~-~-l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRl 111 (1431)
T KOG1240|consen 43 KDREGLVVVKVFVKQDPTISLRPFKQRLEEIKF-A-LMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRL 111 (1431)
T ss_pred cCCCceEEEEEEeccCCCCCchHHHHHHHHHHH-H-hhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhh
Confidence 3444458899886532 22345555667774 3 36999999986655555567888887777655533
No 469
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=42.25 E-value=1.1e+02 Score=20.77 Aligned_cols=37 Identities=5% Similarity=-0.224 Sum_probs=25.4
Q ss_pred cceeEEEccCCCEEEEEEEeecCC--HHHHHHHHHHHHH
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVN--TQEHKRLLTDLDI 47 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~--~~~~~~~~~E~~i 47 (89)
.+..+.+..||+.+|+|+...... ....+.+.+|.-.
T Consensus 27 ~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~ 65 (288)
T PF14531_consen 27 IVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLA 65 (288)
T ss_dssp EEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHG
T ss_pred EEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHH
Confidence 467788889999999999975432 2345666555533
No 470
>KOG4720|consensus
Probab=41.84 E-value=10 Score=26.30 Aligned_cols=35 Identities=11% Similarity=0.251 Sum_probs=25.7
Q ss_pred HHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 44 DLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 44 E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
|+.-...+..|..-.++|+.|..+ ++.||++| +|+
T Consensus 128 Ev~afk~L~a~G~ap~Ly~tF~NG----Lvyefi~g~tL~ 163 (391)
T KOG4720|consen 128 EVIAFKLLAAYGFAPKLYGTFNNG----LVYEFIQGKTLE 163 (391)
T ss_pred HHHHHHHHHHcCcChhhhheecCc----eEEeeecCcccC
Confidence 333333344688889999998877 88899999 765
No 471
>PRK09902 hypothetical protein; Provisional
Probab=40.48 E-value=1e+02 Score=20.02 Aligned_cols=67 Identities=12% Similarity=0.151 Sum_probs=39.4
Q ss_pred CCCEEEEEEEeecCC-----HHHHHHHHHHHHHHHhcC--CCCceeeEE--eEEEEC--CEEEEEecchhc--cHHHHHh
Q psy13291 20 DPDSEWSFRITFTVN-----TQEHKRLLTDLDICMRSS--DCAHTVQFY--GAMFRE--GDVWICMEVMDT--SLDKFYT 86 (89)
Q Consensus 20 ~~~~~AvK~i~~~~~-----~~~~~~~~~E~~il~~~~--~hpniv~~~--~~~~~~--~~~~iv~E~~~~--sL~~~l~ 86 (89)
.|..+-+|+-..... +.-..++.+|...|..+. +=| +++.. +....+ -..+||+|-++| ||++++.
T Consensus 40 ~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvP-VP~pvf~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~ 118 (216)
T PRK09902 40 NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVI-VPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYA 118 (216)
T ss_pred CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCC-CCccceeeeeccCCceEEEEEEEeCCCCccHHHHHh
Confidence 344677787753111 112457888888887643 223 33332 222222 268999997877 9999875
Q ss_pred h
Q psy13291 87 K 87 (89)
Q Consensus 87 ~ 87 (89)
.
T Consensus 119 ~ 119 (216)
T PRK09902 119 Q 119 (216)
T ss_pred c
Confidence 4
No 472
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=40.26 E-value=1.3e+02 Score=21.27 Aligned_cols=70 Identities=9% Similarity=-0.059 Sum_probs=37.6
Q ss_pred eeEEEccCCCEEEEEEEeec----C-C-HHHHHHHHHHHHHHHhcCC-CC-ceeeEEeEEEECCEEEEEecchhc--cHH
Q psy13291 13 ELGLARLDPDSEWSFRITFT----V-N-TQEHKRLLTDLDICMRSSD-CA-HTVQFYGAMFREGDVWICMEVMDT--SLD 82 (89)
Q Consensus 13 ~l~~~~~~~~~~AvK~i~~~----~-~-~~~~~~~~~E~~il~~~~~-hp-niv~~~~~~~~~~~~~iv~E~~~~--sL~ 82 (89)
+.+.....+..+.||+-... . + ....++...|...|..... -| .++++| +.+++...++||+++. .|-
T Consensus 12 frV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy--~~D~e~~~~vMEdL~~~~ilR 89 (370)
T TIGR01767 12 FHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIF--HFDTEMAVTVMEDLSHHKIAR 89 (370)
T ss_pred EEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEE--EEccccceehHhhCccchHHH
Confidence 34443322357899887531 1 1 1234556677778765322 23 233333 3445666799999976 453
Q ss_pred HH
Q psy13291 83 KF 84 (89)
Q Consensus 83 ~~ 84 (89)
..
T Consensus 90 ~~ 91 (370)
T TIGR01767 90 KG 91 (370)
T ss_pred HH
Confidence 33
No 473
>PLN02756 S-methyl-5-thioribose kinase
Probab=39.45 E-value=81 Score=22.62 Aligned_cols=57 Identities=11% Similarity=-0.027 Sum_probs=31.7
Q ss_pred CCEEEEEEEeecC---CH---HHHHHHHHHHHHHHhcCC--CCceeeEEeEEEECCEEEEEecchhc
Q psy13291 21 PDSEWSFRITFTV---NT---QEHKRLLTDLDICMRSSD--CAHTVQFYGAMFREGDVWICMEVMDT 79 (89)
Q Consensus 21 ~~~~AvK~i~~~~---~~---~~~~~~~~E~~il~~~~~--hpniv~~~~~~~~~~~~~iv~E~~~~ 79 (89)
+..+.||+-.... .. -...+...|...|..... -.++++.+.+.. +...++|||+++
T Consensus 55 ~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlvME~L~~ 119 (418)
T PLN02756 55 SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIGMRYLEP 119 (418)
T ss_pred CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEEEeecCC
Confidence 4457888776211 11 123444556666654321 135666665554 556788999966
No 474
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=36.10 E-value=34 Score=23.37 Aligned_cols=40 Identities=10% Similarity=0.016 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCC-CceeeEEeEEEECCEEEEEecchhc-cHHH
Q psy13291 40 RLLTDLDICMRSSDC-AHTVQFYGAMFREGDVWICMEVMDT-SLDK 83 (89)
Q Consensus 40 ~~~~E~~il~~~~~h-pniv~~~~~~~~~~~~~iv~E~~~~-sL~~ 83 (89)
...+|.+.|.++... -.|+.- ...+.-.++|||.+| .|..
T Consensus 155 ~A~rEf~~L~~L~~~G~~VP~P----~~~nRHaVvMe~ieG~eL~~ 196 (304)
T COG0478 155 AAEREFEALQRLYPEGVKVPKP----IAWNRHAVVMEYIEGVELYR 196 (304)
T ss_pred HHHHHHHHHHHhhhcCCCCCCc----cccccceeeeehcccceeec
Confidence 467899999887554 234443 234677899999998 6543
No 475
>COG1669 Predicted nucleotidyltransferases [General function prediction only]
Probab=35.05 E-value=76 Score=17.99 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=22.3
Q ss_pred eeeEEeEEEEC-----CEEEEEecchhc-cHHHHHh
Q psy13291 57 TVQFYGAMFRE-----GDVWICMEVMDT-SLDKFYT 86 (89)
Q Consensus 57 iv~~~~~~~~~-----~~~~iv~E~~~~-sL~~~l~ 86 (89)
=+.++|++-.+ ..+-|+.||.++ ++.++.+
T Consensus 26 ~~~vFGS~aRgE~~~~SDIDILVef~~~~~ll~~~~ 61 (97)
T COG1669 26 RVAVFGSYARGEQKPDSDIDILVEFEPGKTLLDLVR 61 (97)
T ss_pred eEEEeeeeecCCCCCCCCceeEEeecCCccHHHHHH
Confidence 35568888663 378899999999 8777654
No 476
>PTZ00384 choline kinase; Provisional
Probab=33.84 E-value=32 Score=24.06 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=25.3
Q ss_pred HHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 42 LTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 42 ~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
.+|..++..+..+..-.++++.+.. +++.||++| +++
T Consensus 100 ~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~efIeGr~l~ 137 (383)
T PTZ00384 100 DLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEWVEGNTMG 137 (383)
T ss_pred HHHHHHHHHHHhCCCCCeEEEecCC----EEEEEEeccccCC
Confidence 4577777765556566666666642 699999999 653
No 477
>PF05077 DUF678: Protein of unknown function (DUF678); InterPro: IPR007769 This family contains poxvirus proteins belonging to the A19 family. The proteins are of unknown function.
Probab=31.66 E-value=19 Score=19.34 Aligned_cols=15 Identities=33% Similarity=0.609 Sum_probs=8.5
Q ss_pred hhhhhcccceeEEEc
Q psy13291 4 KKKKKKKKPELGLAR 18 (89)
Q Consensus 4 ~~~~~~~~~~l~~~~ 18 (89)
.+|+++|||.-...-
T Consensus 6 ~~Krrkrk~~t~v~~ 20 (74)
T PF05077_consen 6 GKKRRKRKPKTTVDD 20 (74)
T ss_pred cchhcccCCCceeec
Confidence 455566666665443
No 478
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=30.41 E-value=1.8e+02 Score=20.03 Aligned_cols=58 Identities=7% Similarity=-0.089 Sum_probs=34.3
Q ss_pred CCEEEEEEEee-cCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEEEECC--EEEEEecchhc
Q psy13291 21 PDSEWSFRITF-TVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAMFREG--DVWICMEVMDT 79 (89)
Q Consensus 21 ~~~~AvK~i~~-~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~~~~~--~~~iv~E~~~~ 79 (89)
++.+.+. .+. ........+..+|..++.....- -.+..-++.+..+. ..|.+|+|+.|
T Consensus 48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veG 109 (321)
T COG3173 48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEG 109 (321)
T ss_pred CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecc
Confidence 5556666 432 22223456677888888764321 12333455555544 78999999998
No 479
>PRK12396 5-methylribose kinase; Reviewed
Probab=30.37 E-value=88 Score=22.38 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=36.4
Q ss_pred CCEEEEEEEeec--C--C-HHHHHHHHHHHHHHHhcCC-CC-ceeeEEeEEEECCEEEEEecchhc--cHHHHH
Q psy13291 21 PDSEWSFRITFT--V--N-TQEHKRLLTDLDICMRSSD-CA-HTVQFYGAMFREGDVWICMEVMDT--SLDKFY 85 (89)
Q Consensus 21 ~~~~AvK~i~~~--~--~-~~~~~~~~~E~~il~~~~~-hp-niv~~~~~~~~~~~~~iv~E~~~~--sL~~~l 85 (89)
+..++||+-... . + .-..++...|...|..... .| +++++| +.+++...++||+++. .|-+.|
T Consensus 54 ~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy--~~D~e~~~~vMEdL~~~~ilR~~L 125 (409)
T PRK12396 54 NISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVY--LFDSVMNCCVMEDLSDHTILRTAL 125 (409)
T ss_pred CceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEE--EECcHHhhHHHHhCcccHHHHHHH
Confidence 467888877431 1 1 1235667778888765322 23 344443 3455667899999976 454443
No 480
>PLN02667 inositol polyphosphate multikinase
Probab=29.14 E-value=81 Score=21.32 Aligned_cols=21 Identities=19% Similarity=0.316 Sum_probs=16.7
Q ss_pred CceeeEEeEEEE---CCEEEEEec
Q psy13291 55 AHTVQFYGAMFR---EGDVWICME 75 (89)
Q Consensus 55 pniv~~~~~~~~---~~~~~iv~E 75 (89)
+.+..|+|.... ++..||+||
T Consensus 61 ~~~P~y~G~~~~~~~~~~~~i~Le 84 (286)
T PLN02667 61 RFFPVFHGTQLVEASDGSGLLVLE 84 (286)
T ss_pred hhCcccceeEeeccCCCceeEEeh
Confidence 778899999875 456788887
No 481
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=28.78 E-value=74 Score=20.01 Aligned_cols=14 Identities=7% Similarity=0.247 Sum_probs=9.9
Q ss_pred ECCEEEEEecchhc
Q psy13291 66 REGDVWICMEVMDT 79 (89)
Q Consensus 66 ~~~~~~iv~E~~~~ 79 (89)
.++.+|.+-++..+
T Consensus 45 p~D~lwhLGDl~~~ 58 (186)
T COG4186 45 PDDVLWHLGDLSSG 58 (186)
T ss_pred ccceEEEecccccc
Confidence 35677888777776
No 482
>PF09192 Act-Frag_cataly: Actin-fragmin kinase, catalytic; InterPro: IPR015275 This domain assumes a secondary structure consisting of eight beta strands and 11 alpha-helices, organised in two lobes. It is predominantly found in actin-fragmin kinase, it is the catalytic domain that mediates the phosphorylation of actin []. ; PDB: 1CJA_A.
Probab=26.76 E-value=21 Score=24.08 Aligned_cols=16 Identities=19% Similarity=0.449 Sum_probs=9.6
Q ss_pred EEEEEecchhc-cHHHH
Q psy13291 69 DVWICMEVMDT-SLDKF 84 (89)
Q Consensus 69 ~~~iv~E~~~~-sL~~~ 84 (89)
..+++|||.+| .|.++
T Consensus 122 a~~liMeyv~G~~L~e~ 138 (275)
T PF09192_consen 122 AFFLIMEYVPGKPLNEL 138 (275)
T ss_dssp SEEEEEE---EEESTT-
T ss_pred HHHHHHHhcCCCCcccc
Confidence 56999999999 87654
No 483
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=26.49 E-value=1.2e+02 Score=18.75 Aligned_cols=56 Identities=9% Similarity=-0.046 Sum_probs=24.9
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEEeEEEECCEEEEEecchhc-cHH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFYGAMFREGDVWICMEVMDT-SLD 82 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~~~~~~~~~~~iv~E~~~~-sL~ 82 (89)
++.|.+++-... +.. .-.-..|..++..+..+..-.++++.+ .+. .+.||++| +|+
T Consensus 2 ~~~~~~Ri~g~~-t~~-~idr~~E~~~~~~l~~~g~~p~~~~~~--~~g--~v~e~i~g~~l~ 58 (211)
T PF01633_consen 2 PEKYLVRIPGEG-TEN-FIDRENENEALKLLSEAGLGPKIIYFF--ENG--RVEEFIEGRTLS 58 (211)
T ss_dssp TSEEEEEEEESC-GCS-HHHHHHHHHHHHHHHHTTSSS-EEEEE--TTE--EEEE--SSEE--
T ss_pred CCEEEEEeCCCC-ccc-ccCHHHHHHHHHHHHHcCCCCeEEEEc--CCC--cEEEEecccccC
Confidence 345566655432 222 233445666666544444445555543 221 45588877 653
No 484
>KOG1235|consensus
Probab=25.95 E-value=21 Score=26.30 Aligned_cols=16 Identities=19% Similarity=0.308 Sum_probs=11.7
Q ss_pred CEEEEEecchhc-cHHH
Q psy13291 68 GDVWICMEVMDT-SLDK 83 (89)
Q Consensus 68 ~~~~iv~E~~~~-sL~~ 83 (89)
..--++||||+| -+++
T Consensus 275 t~RVLtME~~~G~~i~D 291 (538)
T KOG1235|consen 275 TKRVLTMEYVDGIKIND 291 (538)
T ss_pred cceEEEEEecCCccCCC
Confidence 356799999999 4443
No 485
>PF15632 ATPgrasp_Ter: ATP-grasp in the biosynthetic pathway with Ter operon
Probab=24.10 E-value=35 Score=23.50 Aligned_cols=13 Identities=23% Similarity=0.151 Sum_probs=10.9
Q ss_pred CCEEEEEecchhc
Q psy13291 67 EGDVWICMEVMDT 79 (89)
Q Consensus 67 ~~~~~iv~E~~~~ 79 (89)
.-..+|+|||++|
T Consensus 196 ~~~~llvMeyL~G 208 (329)
T PF15632_consen 196 EFPPLLVMEYLPG 208 (329)
T ss_pred CCCCcEEecCCCC
Confidence 3468999999998
No 486
>PF01947 DUF98: Protein of unknown function (DUF98); InterPro: IPR002800 This entry represents a group of proteins with no known function.; PDB: 2NWI_A.
Probab=23.93 E-value=65 Score=19.43 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=22.1
Q ss_pred CCCceeeEEeEEEECCEEEEEecchhccHHHH
Q psy13291 53 DCAHTVQFYGAMFREGDVWICMEVMDTSLDKF 84 (89)
Q Consensus 53 ~hpniv~~~~~~~~~~~~~iv~E~~~~sL~~~ 84 (89)
..|.+.+-|-.+..+..+.++.|+.+..|+.+
T Consensus 117 ~~~~~~R~Y~i~~~~~pl~~I~E~F~~~L~~~ 148 (149)
T PF01947_consen 117 EGPFWSRTYRIIHNGKPLMVITEVFPPALERY 148 (149)
T ss_dssp S-EEEEEEEEEEETTEEEEEEEEEEEG--GG-
T ss_pred CCCcCccEEEEEECCEEEEEEEEECCcccccc
Confidence 56777777777777888999999887766544
No 487
>COG4471 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.42 E-value=1.3e+02 Score=16.76 Aligned_cols=23 Identities=4% Similarity=0.330 Sum_probs=17.1
Q ss_pred EECCEEEEEecchhc-cHHHHHhhc
Q psy13291 65 FREGDVWICMEVMDT-SLDKFYTKV 88 (89)
Q Consensus 65 ~~~~~~~iv~E~~~~-sL~~~l~~~ 88 (89)
.+...-|+++ ||+. ++++++.++
T Consensus 31 ~Skk~kY~vl-Yvn~~~ve~~~~kl 54 (90)
T COG4471 31 VSKKSKYVVL-YVNEQDVEQIVEKL 54 (90)
T ss_pred EecceeEEEE-EECHHHHHHHHHHH
Confidence 4455667777 8999 999988654
No 488
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=21.80 E-value=2.5e+02 Score=18.52 Aligned_cols=58 Identities=10% Similarity=-0.089 Sum_probs=29.4
Q ss_pred CCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCC-CceeeEEeEE------EECCEEEEEecchhc-cH
Q psy13291 21 PDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDC-AHTVQFYGAM------FREGDVWICMEVMDT-SL 81 (89)
Q Consensus 21 ~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~h-pniv~~~~~~------~~~~~~~iv~E~~~~-sL 81 (89)
+..+.+|........ +.+..|.+++..+..+ -.+++.+.+. ...+..++++||++| ++
T Consensus 45 ~~~~vLK~~~~~~~~---~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~ 110 (307)
T TIGR00938 45 VGRYILTLYEKRVKA---EELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSV 110 (307)
T ss_pred CCcEEEEEecCCCCH---HHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCC
Confidence 335677766432222 2333455555443211 1234433311 124678999999998 64
No 489
>PF13786 DUF4179: Domain of unknown function (DUF4179); PDB: 3FBQ_A.
Probab=21.66 E-value=31 Score=18.57 Aligned_cols=15 Identities=7% Similarity=0.047 Sum_probs=6.4
Q ss_pred EEeEEEECCEEEEEe
Q psy13291 60 FYGAMFREGDVWICM 74 (89)
Q Consensus 60 ~~~~~~~~~~~~iv~ 74 (89)
+-+.+.+++.+++.+
T Consensus 74 i~~v~~D~~~l~i~~ 88 (94)
T PF13786_consen 74 INEVIADGNRLIISY 88 (94)
T ss_dssp EEEEEE-SSEEEEEE
T ss_pred EEEEEEECCEEEEEE
Confidence 333444445555544
No 490
>cd05124 AFK Actin-Fragmin Kinase (AFK); catalytic domain. The AFK catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). AFK is found in slime molds, ciliates, and flowering plants. It catalyzes the transfer of the gamma-phosphoryl group from ATP specifically to threonine residues in the actin-fragmin complex. The phosphorylation sites are located at a minor contact site for DNase I and at an actin-actin contact site. Fragmin is an actin-binding protein that functions as a regulator of the microfilament system. It interferes with the growth of F-actin by severing actin filaments and capping their ends. The phosphorylation of the actin-fragmin complex inhibits its nucleation activity and results in calcium-dependent capping activity. Thus, AFK plays a role in regulating ac
Probab=20.92 E-value=42 Score=22.16 Aligned_cols=16 Identities=25% Similarity=0.252 Sum_probs=12.5
Q ss_pred EEEEEecchhc-cHHHH
Q psy13291 69 DVWICMEVMDT-SLDKF 84 (89)
Q Consensus 69 ~~~iv~E~~~~-sL~~~ 84 (89)
..+++|||.+| .|...
T Consensus 91 ~~flimeYv~G~~l~~~ 107 (238)
T cd05124 91 AYLLIMEYVPGITLFKM 107 (238)
T ss_pred hheeeeeecCCccchhh
Confidence 37999999999 66543
No 491
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=20.10 E-value=2.8e+02 Score=18.39 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=33.9
Q ss_pred cceeEEEccCCCEEEEEEEeecCCHHHHHHHHHHHHHHHhcCCCCceeeEE----e--EEEECCEEEEEecchhc
Q psy13291 11 KPELGLARLDPDSEWSFRITFTVNTQEHKRLLTDLDICMRSSDCAHTVQFY----G--AMFREGDVWICMEVMDT 79 (89)
Q Consensus 11 ~~~l~~~~~~~~~~AvK~i~~~~~~~~~~~~~~E~~il~~~~~hpniv~~~----~--~~~~~~~~~iv~E~~~~ 79 (89)
.++.+.+ ++..+++|.+... .+....+..-..-|.. .+-+++++++ | ....++..|+++++.+|
T Consensus 21 ~v~~v~T--~~G~~~Lk~~~~~--~~~l~~~~~~~~~L~~-~G~~~~~~~~~t~~G~~~~~~~~~~~~L~~wi~G 90 (309)
T TIGR02904 21 KLFKVYT--DQGVFALKKLYAD--RNTIESFVSQIQVLSE-KGFSRIVPVYPTKDGSYYLFHGHFLYYLMPWLDI 90 (309)
T ss_pred cEEEEEe--CCCCEEEEEeccc--hHhHHHHHHHHHHHHH-cCCCcCCceeecCCCCeeeEECCEEEEEeCCccc
Confidence 4455544 3446899988633 2222222222333333 2445555553 2 22335667999999888
Done!