Query psy13292
Match_columns 198
No_of_seqs 103 out of 112
Neff 3.9
Searched_HMMs 13730
Date Fri Aug 16 15:44:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13292.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13292hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2co5a1 a.4.5.48 (A:5-93) STIV 25.8 29 0.0021 23.5 3.4 31 157-187 58-88 (89)
2 d2lhba_ a.1.1.2 (A:) Lamprey g 23.4 95 0.0069 21.3 6.1 25 74-101 6-30 (149)
3 d1it2a_ a.1.1.2 (A:) Hagfish h 14.4 1.6E+02 0.012 20.0 5.6 24 73-99 5-28 (146)
4 d2ia9a1 d.366.1.1 (A:1-92) Put 12.7 21 0.0015 24.6 0.1 24 156-179 48-71 (92)
5 d1kl9a1 a.60.14.1 (A:89-182) E 12.4 2E+02 0.015 19.5 5.4 17 79-101 1-17 (94)
6 d1ua7a1 b.71.1.1 (A:348-425) B 12.3 24 0.0018 23.6 0.3 11 159-169 41-51 (78)
7 d1fnoa3 d.58.19.1 (A:208-320) 11.9 65 0.0047 22.8 2.6 42 148-189 43-93 (113)
8 d1fsla_ a.1.1.2 (A:) Leghemogl 11.5 1.5E+02 0.011 19.5 4.6 17 85-101 6-22 (143)
9 d2i9xa1 d.366.1.1 (A:1-84) Put 11.3 25 0.0018 23.9 0.1 23 156-178 48-70 (84)
10 d1qbaa1 b.1.18.2 (A:781-885) B 11.1 1E+02 0.0074 21.2 3.4 24 87-110 8-31 (105)
No 1
>d2co5a1 a.4.5.48 (A:5-93) STIV F93 {Sulfolobus turreted icosahedral virus [TaxId: 269145]}
Probab=25.79 E-value=29 Score=23.51 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=27.9
Q ss_pred CCCCCCCcccccchhhhHhHHHHHHHHHHHH
Q psy13292 157 NYECPDGDYTDVSRNFEKEYRDRKAALEEIL 187 (198)
Q Consensus 157 ~Y~~PDG~Y~DiTk~~~~e~~~~~~~~~~~~ 187 (198)
.-++|||+-.=.|.+=-.||++.-.|...||
T Consensus 58 eeeapdgkvlfltekgmkefeelheffkkiv 88 (89)
T d2co5a1 58 EEEAPDGKVLFLTEKGMKEFEELHEFFKKIV 88 (89)
T ss_dssp EECCTTSCEEEECHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCCceEEEEehhhhHHHHHHHHHHHhhc
Confidence 4589999999999999999999999988776
No 2
>d2lhba_ a.1.1.2 (A:) Lamprey globin {Sea lamprey (Petromyzon marinus) [TaxId: 7757]}
Probab=23.41 E-value=95 Score=21.29 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=20.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy13292 74 RALPPLSEEVIESRSNLIKEWGIYRSKE 101 (198)
Q Consensus 74 Rpl~~Ls~EelerRalL~K~Ws~Yk~~q 101 (198)
.|+..||.+| +++|...|+....+.
T Consensus 6 ~~~~~Ls~~e---~~~I~~sW~~v~~~~ 30 (149)
T d2lhba_ 6 GSVAPLSAAE---KTKIRSAWAPVYSTY 30 (149)
T ss_dssp SCCCCCCHHH---HHHHHHHHHHHHHTH
T ss_pred CCCCCCCHHH---HHHHHHHHHHHHcCH
Confidence 5688899975 789999999886543
No 3
>d1it2a_ a.1.1.2 (A:) Hagfish hemoglobin {Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]}
Probab=14.40 E-value=1.6e+02 Score=19.96 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=19.1
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy13292 73 SRALPPLSEEVIESRSNLIKEWGIYRS 99 (198)
Q Consensus 73 kRpl~~Ls~EelerRalL~K~Ws~Yk~ 99 (198)
.+|...||.+|. ++|...|+....
T Consensus 5 ~~~~~~LT~~e~---~lI~~sW~~v~~ 28 (146)
T d1it2a_ 5 QGPLPTLTDGDK---KAINKIWPKIYK 28 (146)
T ss_dssp SSSCCCCCHHHH---HHHHHHHHHHHT
T ss_pred CCCCCCCCHHHH---HHHHHHHHHHHc
Confidence 367888999884 799999998753
No 4
>d2ia9a1 d.366.1.1 (A:1-92) Putative septation protein SpoVG {Bacillus subtilis [TaxId: 1423]}
Probab=12.75 E-value=21 Score=24.65 Aligned_cols=24 Identities=21% Similarity=0.577 Sum_probs=18.6
Q ss_pred CCCCCCCCcccccchhhhHhHHHH
Q psy13292 156 ENYECPDGDYTDVSRNFEKEYRDR 179 (198)
Q Consensus 156 ~~Y~~PDG~Y~DiTk~~~~e~~~~ 179 (198)
+.|-.+||+|-||.---+.||++.
T Consensus 48 Ps~k~~~g~y~Di~~Pi~~e~R~~ 71 (92)
T d2ia9a1 48 PSKRTPDGEFRDITHPINSSTRGK 71 (92)
T ss_dssp CEEECTTSCEEESEEESSHHHHHH
T ss_pred CCcCCCCCCEEEEEEECCHHHHHH
Confidence 356789999999987777777653
No 5
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.38 E-value=2e+02 Score=19.54 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=12.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHH
Q psy13292 79 LSEEVIESRSNLIKEWGIYRSKE 101 (198)
Q Consensus 79 Ls~EelerRalL~K~Ws~Yk~~q 101 (198)
+|+||. .||+-+|....
T Consensus 1 VSpEdi------~kCEery~KsK 17 (94)
T d1kl9a1 1 VSPEEA------IKCEDKFTKSK 17 (94)
T ss_dssp CCHHHH------HHHHHHHHHHH
T ss_pred CCHHHH------HHHHHHHHHHH
Confidence 467776 78999887654
No 6
>d1ua7a1 b.71.1.1 (A:348-425) Bacterial alpha-Amylase {Bacillus subtilis [TaxId: 1423]}
Probab=12.29 E-value=24 Score=23.63 Aligned_cols=11 Identities=36% Similarity=0.839 Sum_probs=9.0
Q ss_pred CCCCCcccccc
Q psy13292 159 ECPDGDYTDVS 169 (198)
Q Consensus 159 ~~PDG~Y~DiT 169 (198)
..|||.|-|+-
T Consensus 41 ~Lp~GtYcDvi 51 (78)
T d1ua7a1 41 KLPDGRYDNKA 51 (78)
T ss_dssp CSCSEEEECTT
T ss_pred cCCCcceeEEe
Confidence 46999999974
No 7
>d1fnoa3 d.58.19.1 (A:208-320) Peptidase T (tripeptidase) {Salmonella typhimurium [TaxId: 90371]}
Probab=11.93 E-value=65 Score=22.78 Aligned_cols=42 Identities=24% Similarity=0.372 Sum_probs=26.0
Q ss_pred CCCCCCCCCCCCCC---CCcccccchhh------hHhHHHHHHHHHHHHhh
Q psy13292 148 GPLHTPPIENYECP---DGDYTDVSRNF------EKEYRDRKAALEEILNK 189 (198)
Q Consensus 148 GPt~TPPi~~Y~~P---DG~Y~DiTk~~------~~e~~~~~~~~~~~~~~ 189 (198)
.|-.|==.+||--+ .|.-...+-.| ...|+.||++|++++++
T Consensus 43 ~PE~Teg~EGF~hl~~~~G~ve~a~l~yIIRDfd~~~f~~rk~~l~~~~~~ 93 (113)
T d1fnoa3 43 APETTEGYEGFYHLASMKGTVDRAEMHYIIRDFDRKQFEARKRKMMEIAKK 93 (113)
T ss_dssp SGGGCCTTCCEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCccceEEEeeeeechHHEEEEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 55555434433222 34444444444 67899999999999977
No 8
>d1fsla_ a.1.1.2 (A:) Leghemoglobin {Soybean (Glycine max), isoform A [TaxId: 3847]}
Probab=11.47 E-value=1.5e+02 Score=19.46 Aligned_cols=17 Identities=0% Similarity=0.169 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy13292 85 ESRSNLIKEWGIYRSKE 101 (198)
Q Consensus 85 erRalL~K~Ws~Yk~~q 101 (198)
+.+++|.+.|+..+.+.
T Consensus 6 ~q~~li~~SW~~v~~~~ 22 (143)
T d1fsla_ 6 KQDALVSSSFEAFKANI 22 (143)
T ss_dssp HHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHhhH
Confidence 45799999999987754
No 9
>d2i9xa1 d.366.1.1 (A:1-84) Putative septation protein SpoVG {Staphylococcus epidermidis [TaxId: 1282]}
Probab=11.26 E-value=25 Score=23.88 Aligned_cols=23 Identities=22% Similarity=0.629 Sum_probs=18.0
Q ss_pred CCCCCCCCcccccchhhhHhHHH
Q psy13292 156 ENYECPDGDYTDVSRNFEKEYRD 178 (198)
Q Consensus 156 ~~Y~~PDG~Y~DiTk~~~~e~~~ 178 (198)
+.|-.+||+|-||.---+.||++
T Consensus 48 Ps~k~~~g~y~Di~~Pi~~e~R~ 70 (84)
T d2i9xa1 48 PSKRTPDGEFRDIAHPINSDMRQ 70 (84)
T ss_dssp CEEECTTSCEEECEEECSHHHHH
T ss_pred CCcCCCCCCEEEEEEECCHHHHH
Confidence 35667999999998777777764
No 10
>d1qbaa1 b.1.18.2 (A:781-885) Bacterial chitobiase (N-acetyl-beta-glucoseaminidase), C-terminal domain {Serratia marcescens [TaxId: 615]}
Probab=11.13 E-value=1e+02 Score=21.15 Aligned_cols=24 Identities=21% Similarity=0.396 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy13292 87 RSNLIKEWGIYRSKEAQKDYKLID 110 (198)
Q Consensus 87 RalL~K~Ws~Yk~~q~~~e~~~I~ 110 (198)
.+.+.++|+.|-...-.+++..|+
T Consensus 8 ~~a~~kdW~~Fan~lg~kelprLd 31 (105)
T d1qbaa1 8 TQALEKDWLRFANILGQRELAKLD 31 (105)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH
Confidence 456899999999999888887775
Done!