Your job contains 1 sequence.
>psy13292
MAPSVQYAIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEKEYRDRKAALEEILN
KNKKPHQRKKIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRAL
DELRLESEELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEKEYRDRK
AALEEILNKNKKPHQRKK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13292
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0037892 - symbol:mRpL40 "mitochondrial ribosomal p... 278 2.6e-24 1
UNIPROTKB|E1BZC7 - symbol:LOC100858795 "Uncharacterized p... 236 7.2e-20 1
UNIPROTKB|Q9NQ50 - symbol:MRPL40 "39S ribosomal protein L... 230 3.1e-19 1
MGI|MGI:1332635 - symbol:Mrpl40 "mitochondrial ribosomal ... 229 4.0e-19 1
UNIPROTKB|F8WBK5 - symbol:MRPL40 "39S ribosomal protein L... 227 6.5e-19 1
RGD|1565444 - symbol:Mrpl40 "mitochondrial ribosomal prot... 226 8.3e-19 1
ZFIN|ZDB-GENE-040912-37 - symbol:mrpl40 "mitochondrial ri... 219 4.6e-18 1
UNIPROTKB|F1RK59 - symbol:MRPL40 "Uncharacterized protein... 218 5.8e-18 1
UNIPROTKB|F1N1R3 - symbol:Bt.40326 "Uncharacterized prote... 204 1.8e-16 1
WB|WBGene00018793 - symbol:mrpl-40 species:6239 "Caenorha... 182 3.8e-14 1
>FB|FBgn0037892 [details] [associations]
symbol:mRpL40 "mitochondrial ribosomal protein L40"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP]
EMBL:AE014297 GO:GO:0022008 GO:GO:0006412 GO:GO:0005762
GO:GO:0003735 InterPro:IPR019192 Pfam:PF09812 CTD:64976
eggNOG:NOG331446 OMA:KWSLYKQ GeneTree:ENSGT00390000010239
EMBL:AY071609 RefSeq:NP_524318.1 UniGene:Dm.2445 IntAct:Q9VGP7
MINT:MINT-835413 STRING:Q9VGP7 EnsemblMetazoa:FBtr0082384
GeneID:41364 KEGG:dme:Dmel_CG5242 UCSC:CG5242-RA
FlyBase:FBgn0037892 InParanoid:Q9VGP7 OrthoDB:EOG4H70TX
GenomeRNAi:41364 NextBio:823488 Uniprot:Q9VGP7
Length = 196
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 61/132 (46%), Positives = 83/132 (62%)
Query: 42 RNFEKEYRDRKAALEEILNKNKKPHQRKKIRSRALPPLSEEVIESRSNLIKEWGIYRSKE 101
R EK R K ++E+ + ++ K R R L PL+ + +E R+ L K+W Y+ E
Sbjct: 65 RRLEKNARQLKP-VDELEVPLELIDEKDK-RQRKLAPLTIDQLEERALLKKQWAHYKHDE 122
Query: 102 AQKDYKLIDRLIYSQQRALDELRLESEELYQEAIQIDPTLLPFAAKGPLHTPPIENYECP 161
D+++IDRL+ +Q +AL ELR ESEELYQ AI IDP LLP A KGP+ TPPI++Y P
Sbjct: 123 RVADFQIIDRLVQAQNKALAELRRESEELYQAAIDIDPQLLPVAVKGPVATPPIKDYVSP 182
Query: 162 DGDYTDVSRNFE 173
DGDY S +E
Sbjct: 183 DGDYLHQSMKWE 194
Score = 117 (46.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 22/37 (59%), Positives = 26/37 (70%)
Query: 9 IDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFE 45
IDP LLP A KGP+ TPPI++Y PDGDY S +E
Sbjct: 158 IDPQLLPVAVKGPVATPPIKDYVSPDGDYLHQSMKWE 194
>UNIPROTKB|E1BZC7 [details] [associations]
symbol:LOC100858795 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 InterPro:IPR019192 Pfam:PF09812 OMA:KWSLYKQ
GeneTree:ENSGT00390000010239 EMBL:AADN02034775 IPI:IPI00599946
RefSeq:XP_003642247.1 Ensembl:ENSGALT00000002410 GeneID:100858795
KEGG:gga:100858795 Uniprot:E1BZC7
Length = 191
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 59/164 (35%), Positives = 90/164 (54%)
Query: 10 DPTLLPFAAKGPLHTPPIENYEC-PDGDYTDVSRNFEKEYRDRKAALEEI-LNKNKKPHQ 67
D ++L A P P + + P + R +K + KAA E I + + P +
Sbjct: 24 DTSVLAGRASLPARAQPKKKKKVDPKREQAQKDRVKKKIKKLEKAAPELIPIEDFETPLK 83
Query: 68 -RKKIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLE 126
R R+LPPLS E E R L+K+W +Y+ ++ + + + I L+ +QQ AL ELRLE
Sbjct: 84 FSDSNRVRSLPPLSFEETERRVLLMKKWSLYKQQQDKAEKEAIQSLVEAQQEALKELRLE 143
Query: 127 SEELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSR 170
SEELYQ A++ D L PF GP +TPP+ Y+ P+G D+++
Sbjct: 144 SEELYQAAVRRDEELFPFERDGPNYTPPLPGYDPPEGKCIDITK 187
>UNIPROTKB|Q9NQ50 [details] [associations]
symbol:MRPL40 "39S ribosomal protein L40, mitochondrial"
species:9606 "Homo sapiens" [GO:0005761 "mitochondrial ribosome"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=TAS] [GO:0009653 "anatomical
structure morphogenesis" evidence=TAS] GO:GO:0005634 EMBL:CH471176
GO:GO:0009653 GO:GO:0005761 InterPro:IPR019192 Pfam:PF09812
EMBL:AF034091 EMBL:AJ295637 EMBL:CR456532 EMBL:AK123768
EMBL:BC009707 IPI:IPI00099871 RefSeq:NP_003767.2 UniGene:Hs.431307
ProteinModelPortal:Q9NQ50 IntAct:Q9NQ50 STRING:Q9NQ50
PhosphoSite:Q9NQ50 DMDM:21263795 PaxDb:Q9NQ50 PeptideAtlas:Q9NQ50
PRIDE:Q9NQ50 DNASU:64976 Ensembl:ENST00000333130 GeneID:64976
KEGG:hsa:64976 UCSC:uc002zpg.3 CTD:64976 GeneCards:GC22P019419
HGNC:HGNC:14491 HPA:HPA006181 MIM:605089 neXtProt:NX_Q9NQ50
PharmGKB:PA30972 eggNOG:NOG331446 HOGENOM:HOG000015976
HOVERGEN:HBG044505 InParanoid:Q9NQ50 OMA:KWSLYKQ OrthoDB:EOG4JM7QW
PhylomeDB:Q9NQ50 GenomeRNAi:64976 NextBio:67160 ArrayExpress:Q9NQ50
Bgee:Q9NQ50 CleanEx:HS_MRPL40 Genevestigator:Q9NQ50
GermOnline:ENSG00000185608 Uniprot:Q9NQ50
Length = 206
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 54/171 (31%), Positives = 95/171 (55%)
Query: 12 TLLPFAAKGPLHTPPIENYECPDGDYT-DVSRNFEKEYRDRKAALEEILNKNKKPHQRK- 69
+LL F P+ + P+ + D + +++ R + A +E++ K
Sbjct: 35 SLLSFWELIPMRSEPLRKKKKVDPKKDQEAKERLKRKIRKLEKATQELIPIEDFITPLKF 94
Query: 70 --KIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLES 127
K R R L+ E E R+ L+K+W +Y+ +E + + I ++ +QQ AL+EL+LES
Sbjct: 95 LDKARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLES 154
Query: 128 EELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
+L+ EAI+ DP L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 155 PKLHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFK 205
Score = 108 (43.1 bits), Expect = 0.00024, P = 0.00024
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 10 DPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 49
DP L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 165 DPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFK 205
>MGI|MGI:1332635 [details] [associations]
symbol:Mrpl40 "mitochondrial ribosomal protein L40"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005761
"mitochondrial ribosome" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
MGI:MGI:1332635 GO:GO:0005761 InterPro:IPR019192 Pfam:PF09812
CTD:64976 eggNOG:NOG331446 HOGENOM:HOG000015976 HOVERGEN:HBG044505
OMA:KWSLYKQ OrthoDB:EOG4JM7QW EMBL:AF034092 EMBL:BC028436
EMBL:AK018757 IPI:IPI00323669 RefSeq:NP_035052.2 UniGene:Mm.20918
ProteinModelPortal:Q9Z2Q5 STRING:Q9Z2Q5 PhosphoSite:Q9Z2Q5
PaxDb:Q9Z2Q5 PRIDE:Q9Z2Q5 Ensembl:ENSMUST00000023391 GeneID:18100
KEGG:mmu:18100 GeneTree:ENSGT00390000010239 InParanoid:Q9Z2Q5
NextBio:293263 Bgee:Q9Z2Q5 CleanEx:MM_MRPL40 Genevestigator:Q9Z2Q5
GermOnline:ENSMUSG00000022706 Uniprot:Q9Z2Q5
Length = 206
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 55/171 (32%), Positives = 94/171 (54%)
Query: 12 TLLPFAAKGPLHTPPIENYECPDGDYTDVSRN-FEKEYRDRKAALEEILNKNK--KPHQ- 67
+LL F P+ P+ + D +++ +K R + A +E++ P +
Sbjct: 35 SLLAFWDLIPMRAEPLRKKKKVDPRKDQAAKDRLKKRIRKLEKASQELIPIEDFITPVRF 94
Query: 68 RKKIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLES 127
K R R S E E R+ L+K W +++ +E + + I ++ +QQ AL+EL+LES
Sbjct: 95 LDKSRQRPQEEHSPEESERRALLLKRWALFKQQEHEMERDAIRSMLEAQQEALEELKLES 154
Query: 128 EELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
ELY EAI+ D +L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 155 AELYAEAIKRDTSLFPFEKEGPHYTPPISNYQAPEGRYNDITKVYTQVEFK 205
Score = 105 (42.0 bits), Expect = 0.00057, P = 0.00057
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 10 DPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 49
D +L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 165 DTSLFPFEKEGPHYTPPISNYQAPEGRYNDITKVYTQVEFK 205
>UNIPROTKB|F8WBK5 [details] [associations]
symbol:MRPL40 "39S ribosomal protein L40, mitochondrial"
species:9606 "Homo sapiens" [GO:0005761 "mitochondrial ribosome"
evidence=IEA] GO:GO:0005739 InterPro:IPR019192 Pfam:PF09812
HGNC:HGNC:14491 EMBL:AC000068 EMBL:AC000079 IPI:IPI00852745
ProteinModelPortal:F8WBK5 PRIDE:F8WBK5 Ensembl:ENST00000443660
ArrayExpress:F8WBK5 Bgee:F8WBK5 Uniprot:F8WBK5
Length = 162
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 44/109 (40%), Positives = 72/109 (66%)
Query: 70 KIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLESEE 129
K R R L+ E E R+ L+K+W +Y+ +E + + I ++ +QQ AL+EL+LES +
Sbjct: 53 KARERPQVELTFEETERRALLLKKWSLYKQQERKMERDTIRAMLEAQQEALEELQLESPK 112
Query: 130 LYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
L+ EAI+ DP L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 113 LHAEAIKRDPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFK 161
Score = 108 (43.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 10 DPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 49
DP L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 121 DPNLFPFEKEGPHYTPPIPNYQPPEGRYNDITKVYTQVEFK 161
>RGD|1565444 [details] [associations]
symbol:Mrpl40 "mitochondrial ribosomal protein L40"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005761
"mitochondrial ribosome" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] RGD:1565444 GO:GO:0005761
InterPro:IPR019192 Pfam:PF09812 CTD:64976 HOVERGEN:HBG044505
EMBL:BC097472 IPI:IPI00337269 RefSeq:NP_001020036.1 UniGene:Rn.3831
PRIDE:P83565 GeneID:287962 KEGG:rno:287962 NextBio:627307
Genevestigator:P83565 GermOnline:ENSRNOG00000001896 Uniprot:P83565
Length = 206
Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 54/171 (31%), Positives = 94/171 (54%)
Query: 12 TLLPFAAKGPLHTPPIENYECPDGDYTDVSRN-FEKEYRDRKAALEEILNKNK--KPHQ- 67
+LL F P+ P+ + D +++ +K R + A +E++ P +
Sbjct: 35 SLLSFWELIPMRAEPLRKKKKVDPRKDQAAKDRLKKRIRKLERASQELVPIEDFITPVRF 94
Query: 68 RKKIRSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLES 127
K R R S E E R+ L+K W +Y+ +E + + I ++ +QQ AL++L+LES
Sbjct: 95 LDKSRQRPQEEHSFEESERRALLLKRWALYKQQEHEMERDAIRAMLEAQQEALEQLKLES 154
Query: 128 EELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
ELY EAI+ D +L PF +GP +TPP+ NY+ P+G Y D+++ + + E++
Sbjct: 155 TELYAEAIKRDTSLFPFEKEGPHYTPPVPNYQAPEGRYNDITKVYTQVEFK 205
>ZFIN|ZDB-GENE-040912-37 [details] [associations]
symbol:mrpl40 "mitochondrial ribosomal protein L40"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040912-37 GO:GO:0005840 InterPro:IPR019192
Pfam:PF09812 CTD:64976 eggNOG:NOG331446 HOGENOM:HOG000015976
HOVERGEN:HBG044505 OMA:KWSLYKQ OrthoDB:EOG4JM7QW
GeneTree:ENSGT00390000010239 EMBL:BX088526 EMBL:BC081481
IPI:IPI00505538 RefSeq:NP_001004612.1 UniGene:Dr.81210
STRING:Q66I86 Ensembl:ENSDART00000063943 GeneID:447873
KEGG:dre:447873 InParanoid:Q66I86 NextBio:20832394 Uniprot:Q66I86
Length = 200
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 43/99 (43%), Positives = 66/99 (66%)
Query: 72 RSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLESEELY 131
R+RALP + E E R+ L+KEW ++ K+ Q + + I + +Q++AL +L+LES+ELY
Sbjct: 98 RTRALPEVCFEESERRALLLKEWSRHKHKQHQMEMQEIQEALKAQKQALMQLKLESKELY 157
Query: 132 QEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSR 170
A++ D LPF GP +TPPI +YE P+G Y D++R
Sbjct: 158 IAALRPDTDTLPFLHHGPSYTPPIADYEAPEGKYNDITR 196
>UNIPROTKB|F1RK59 [details] [associations]
symbol:MRPL40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
InterPro:IPR019192 Pfam:PF09812 CTD:64976 OMA:KWSLYKQ
GeneTree:ENSGT00390000010239 EMBL:CU618331 RefSeq:NP_001230488.1
UniGene:Ssc.5871 UniGene:Ssc.81677 Ensembl:ENSSSCT00000029183
GeneID:100155568 KEGG:ssc:100155568 Uniprot:F1RK59
Length = 206
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 53/171 (30%), Positives = 92/171 (53%)
Query: 12 TLLPFAAKGPLHTPPIENYECPDGDYTDVSRN-FEKEYRDRKAALEEILNKNKKPHQRKK 70
+L F P+ P+ + D +++ +K R + A +E++ K
Sbjct: 35 SLFSFWGLVPMRAEPLRKKKKVDPKKDQAAKDRLKKRIRRLEKASQELIPIEDFITPVKF 94
Query: 71 I-RSRALPP--LSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLES 127
+ + R PP L E E R+ L+K W +Y+ +E + + I L+ +Q+ AL ELRL S
Sbjct: 95 LNKERQRPPVELPFEESERRALLLKRWSLYKQREHEMERSAIRSLLEAQEEALQELRLSS 154
Query: 128 EELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
EL+ EA + DP+L PF +GP +TPPI +Y+ P+G Y D+++ + + E++
Sbjct: 155 PELHAEATKRDPSLFPFERQGPDYTPPISDYQPPEGRYQDITKVYTQVEFK 205
>UNIPROTKB|F1N1R3 [details] [associations]
symbol:Bt.40326 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] GO:GO:0005739
InterPro:IPR019192 Pfam:PF09812 OMA:KWSLYKQ
GeneTree:ENSGT00390000010239 EMBL:DAAA02045760 IPI:IPI01004203
Ensembl:ENSBTAT00000026501 Uniprot:F1N1R3
Length = 206
Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 52/171 (30%), Positives = 91/171 (53%)
Query: 12 TLLPFAAKGPLHTPPIENYECPDGDYTDVSRN-FEKEYRDRKAALEEILNKNKKPHQRKK 70
+LL F P P+ + D ++ +K R + A +E++ K
Sbjct: 35 SLLSFWGLVPTRAEPLRKKKKVDPKKDQAAKERLKKRIRRLEKATQELIPIEDFITPVKF 94
Query: 71 I-RSRALPP--LSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLES 127
+ ++R PP L E E R+ L+K+W +Y+ +E + + I L+ +Q+ AL EL L +
Sbjct: 95 LNQARQRPPVELPFEESERRALLLKKWSLYKQREHELERAAIASLLEAQREALQELELTA 154
Query: 128 EELYQEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNFEK-EYR 177
EL+ EA + D +L PF +GP +TPPI NY+ P+G Y D+++ + + E++
Sbjct: 155 PELHAEATKRDSSLFPFERQGPDYTPPIANYQPPEGRYQDITKVYTQVEFK 205
>WB|WBGene00018793 [details] [associations]
symbol:mrpl-40 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 InterPro:IPR019192
Pfam:PF09812 eggNOG:NOG331446 HOGENOM:HOG000015976 OMA:KWSLYKQ
GeneTree:ENSGT00390000010239 EMBL:FO080712 PIR:T33608
RefSeq:NP_497138.1 ProteinModelPortal:Q9TZ90 STRING:Q9TZ90
PaxDb:Q9TZ90 EnsemblMetazoa:F54C4.1 GeneID:175174
KEGG:cel:CELE_F54C4.1 UCSC:F54C4.1 CTD:175174 WormBase:F54C4.1
InParanoid:Q9TZ90 NextBio:887070 Uniprot:Q9TZ90
Length = 189
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 72 RSRALPPLSEEVIESRSNLIKEWGIYRSKEAQKDYKLIDRLIYSQQRALDELRLESEELY 131
R R L+ E I+ R+ +K++ R Q+D I I SQ++AL+EL++ ELY
Sbjct: 87 RRRPRTELTLEQIDERAIALKDYTRSRLALQQEDDAWIRGAIESQRKALNELKMLKLELY 146
Query: 132 QEAIQIDPTLLPFAAKGPLHTPPIENYECPDGDYTDVSRNF 172
+ A+Q LP +GP TPPI NYE PDGDY D +RN+
Sbjct: 147 EAAVQPAAKDLPLIVQGPSLTPPIRNYEAPDGDYIDTTRNW 187
Score = 112 (44.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 21/39 (53%), Positives = 25/39 (64%)
Query: 8 AIDPTL--LPFAAKGPLHTPPIENYECPDGDYTDVSRNF 44
A+ P LP +GP TPPI NYE PDGDY D +RN+
Sbjct: 149 AVQPAAKDLPLIVQGPSLTPPIRNYEAPDGDYIDTTRNW 187
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.134 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 198 0.00083 111 3 11 23 0.41 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 568 (60 KB)
Total size of DFA: 151 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.03u 0.08s 25.11t Elapsed: 00:00:06
Total cpu time: 25.03u 0.08s 25.11t Elapsed: 00:00:06
Start: Thu Aug 15 11:07:07 2013 End: Thu Aug 15 11:07:13 2013