BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1330
(221 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P19971|TYPH_HUMAN Thymidine phosphorylase OS=Homo sapiens GN=TYMP PE=1 SV=2
Length = 482
Score = 236 bits (602), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 156/221 (70%), Gaps = 4/221 (1%)
Query: 4 IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
+ EL+R KR G LS +I FV V G+A+ +QIGAMLMA+ + G+ EET LT+++
Sbjct: 36 LPELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQAL 95
Query: 64 VDSGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT 120
SG+ L W PE +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL +GGT
Sbjct: 96 AQSGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGT 154
Query: 121 LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC 180
LDKLESIPG+ V S ++ L + GC IVG ++QL P D ILY RDVTATVD+L L
Sbjct: 155 LDKLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLI 214
Query: 181 SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
+ASILSKK+ EG LV+DVK G A+ F E+A+E+A+ L
Sbjct: 215 TASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 255
>sp|Q5FVR2|TYPH_RAT Thymidine phosphorylase OS=Rattus norvegicus GN=Tymp PE=2 SV=1
Length = 476
Score = 236 bits (601), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/218 (55%), Positives = 155/218 (71%), Gaps = 2/218 (0%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR+G LS +I FV+ + G A+D+QIGAMLMA+ + G+ EET LT+++ +
Sbjct: 31 ELIRLKRNGGHLSEADIRNFVHALMDGRAQDTQIGAMLMAIRLQGMDLEETSVLTQALAE 90
Query: 66 SGETLSWRP--EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
SG+ L W +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGR L +GGTLDK
Sbjct: 91 SGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDK 150
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
LESIPG+ V S + L EVGC IVG +++L P D ILY RDVTATVD++ L +AS
Sbjct: 151 LESIPGFSVTQSPEQMLQILEEVGCCIVGQSEKLVPADGILYAARDVTATVDSVPLITAS 210
Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ILSKK EG LV+DVK G A+ F EKA+E+A++L
Sbjct: 211 ILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKML 248
>sp|Q99N42|TYPH_MOUSE Thymidine phosphorylase OS=Mus musculus GN=Tymp PE=2 SV=1
Length = 471
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 152/218 (69%), Gaps = 2/218 (0%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR G L +I FV+ + G A+D+QIGAMLMA+ + G+ EET LT+++ +
Sbjct: 24 ELIRLKRDGGHLREADIRNFVHAVIDGRAQDTQIGAMLMAIRLQGMNLEETSVLTRALAE 83
Query: 66 SGETLSWRP--EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
SG+ L W +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGR L +GGTLDK
Sbjct: 84 SGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDK 143
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
LESIPG+ V S + L EVGC IVG + +L P D ILY RDVTATVD++ L +AS
Sbjct: 144 LESIPGFGVTQSPEQMLHILEEVGCCIVGQSAKLVPADGILYAARDVTATVDSVPLITAS 203
Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ILSKK EG LV+DVK G A+ F EKA+E+A++L
Sbjct: 204 ILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKML 241
>sp|Q92T50|TYPH_RHIME Thymidine phosphorylase OS=Rhizobium meliloti (strain 1021) GN=deoA
PE=3 SV=1
Length = 440
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/220 (50%), Positives = 146/220 (66%), Gaps = 7/220 (3%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ L P EIA F+ G+ + Q A MA++ +G+ +E +ALT +M D
Sbjct: 7 EIIRKKRDGDRLDPAEIAGFIAGVTDGSVSEGQAAAFAMAVWFSGMNRDECVALTLAMRD 66
Query: 66 SGETLSW----RPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTL 121
SGETL W RP +VDKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTL
Sbjct: 67 SGETLDWSDLARP---IVDKHSTGGVGDNVSLMLAPIVAACGAAVPMISGRGLGHTGGTL 123
Query: 122 DKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCS 181
DKLESIPGY + S + EVGC I+G L+P D+ LY +RDVTATVD++ L +
Sbjct: 124 DKLESIPGYDIQPSPELFRRVADEVGCAIIGQTADLAPADKRLYAIRDVTATVDSVPLIT 183
Query: 182 ASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ASILSKK+A G + LV+DVK+G SF + + +A L
Sbjct: 184 ASILSKKLAAGLRSLVLDVKLGNGSFMTDPAETEVLARSL 223
>sp|A6UET3|TYPH_SINMW Thymidine phosphorylase OS=Sinorhizobium medicae (strain WSM419)
GN=deoA PE=3 SV=1
Length = 438
Score = 217 bits (552), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 142/207 (68%), Gaps = 7/207 (3%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G L P EIA F+ G+ + Q A MA++ +G++ +E +ALT +M D
Sbjct: 7 EVIRKKRDGGRLVPAEIAGFIEGLADGSISEGQAAAFAMAVWFSGMSRDECVALTLAMRD 66
Query: 66 SGETLSW----RPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTL 121
SGETL W RP VVDKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTL
Sbjct: 67 SGETLDWGEFGRP---VVDKHSTGGVGDNVSLMLAPIVAACGPVVPMISGRGLGHTGGTL 123
Query: 122 DKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCS 181
DKLESIPGY + S + + EVGC I+G L+P D+ LY +RDVTATVD++ L +
Sbjct: 124 DKLESIPGYNIQPSPELFRRVVDEVGCAIIGQTANLAPADKRLYAIRDVTATVDSVPLIT 183
Query: 182 ASILSKKVAEGTKYLVIDVKVGEASFF 208
ASILSKK+A G + LV+DVK+G SF
Sbjct: 184 ASILSKKLAAGLQSLVLDVKLGNGSFM 210
>sp|C3MBH0|TYPH_RHISN Thymidine phosphorylase OS=Rhizobium sp. (strain NGR234) GN=deoA
PE=3 SV=1
Length = 438
Score = 214 bits (546), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 111/220 (50%), Positives = 144/220 (65%), Gaps = 7/220 (3%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G L EIA FV+ G+ + Q+ A MA + +G+ +E +ALT +M D
Sbjct: 7 EVIRKKRDGGRLDRAEIADFVSGLADGSISEGQVAAFAMATWFSGMNRDECVALTLAMRD 66
Query: 66 SGETLSW----RPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTL 121
SG+ L W RP +VDKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTL
Sbjct: 67 SGDILDWSEFGRP---IVDKHSTGGVGDNVSLMLAPIVAACGPNVPMISGRGLGHTGGTL 123
Query: 122 DKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCS 181
DKLESIPGY + S + + EVGC I+G L+P D+ LY +RDVTATVD++ L +
Sbjct: 124 DKLESIPGYNIQPSPELFRQIVDEVGCAIIGQTANLAPADKRLYAIRDVTATVDSVPLIT 183
Query: 182 ASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ASILSKK+A G + LV+DVK+G SF K +A L
Sbjct: 184 ASILSKKLAAGLQSLVLDVKLGNGSFMTDARATKTLARSL 223
>sp|A0KCQ9|TYPH_BURCH Thymidine phosphorylase OS=Burkholderia cenocepacia (strain HI2424)
GN=deoA PE=3 SV=1
Length = 438
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E +R+KR G L ++A FV G+ + Q+ A MA++ N L+ +E +ALT + D
Sbjct: 6 EFIRRKRDGQPLDRDDMAAFVRGVTDGSVTEGQVAAFAMAVYFNDLSTDERVALTLAQRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L WR D+ V+DKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGDVLDWRALDLGGPVIDKHSTGGVGDVVSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KL +IPGY V T + + EVG I+G +L+P D+ +Y +RDVTATV+++++ +A
Sbjct: 126 KLSAIPGYDVMPDTDAFRRTVREVGVAIIGQTARLAPADKRIYAIRDVTATVESVAMITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G LV+DVKVG +F T EK+ E+A
Sbjct: 186 SILSKKLAAGLDGLVMDVKVGSGAFMPTAEKSAELAR 222
>sp|Q1BV59|TYPH_BURCA Thymidine phosphorylase OS=Burkholderia cenocepacia (strain AU
1054) GN=deoA PE=3 SV=1
Length = 438
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E +R+KR G L ++A FV G+ + Q+ A MA++ N L+ +E +ALT + D
Sbjct: 6 EFIRRKRDGQPLDRDDMAAFVRGVTDGSVTEGQVAAFAMAVYFNDLSTDERVALTLAQRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L WR D+ V+DKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGDVLDWRALDLGGPVIDKHSTGGVGDVVSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KL +IPGY V T + + EVG I+G +L+P D+ +Y +RDVTATV+++++ +A
Sbjct: 126 KLSAIPGYDVMPDTDAFRRTVREVGVAIIGQTARLAPADKRIYAIRDVTATVESVAMITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G LV+DVKVG +F T EK+ E+A
Sbjct: 186 SILSKKLAAGLDGLVMDVKVGSGAFMPTAEKSAELAR 222
>sp|Q8UJ08|TYPH_AGRT5 Thymidine phosphorylase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=deoA PE=3 SV=1
Length = 438
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 147/219 (67%), Gaps = 5/219 (2%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++R+KR G L+P EIA F+ + Q A MA+F G+ +E +ALT +M D
Sbjct: 7 EIIRRKRDGLSLAPQEIAAFIEALSKDGISEGQAAAFAMAVFFRGMNRDEMVALTLAMRD 66
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ LSWR DI V DKHSTGGVGD VS+ L P +AACGL VPM+SGRGL +GGTLD
Sbjct: 67 SGDVLSWR--DIGRPVADKHSTGGVGDNVSLMLAPIVAACGLAVPMISGRGLGHTGGTLD 124
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPGY V A + + VGC I+G L+P D+ LY +RDVTATVD++ L +A
Sbjct: 125 KLEAIPGYDVMPDEALFRRTVQSVGCAIIGQTGDLAPADKRLYAIRDVTATVDSIPLITA 184
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SILSKK+A G + LV+DVKVG +F ++ E A+ +A L
Sbjct: 185 SILSKKLAAGLETLVLDVKVGNGAFMQSLEDARILARAL 223
>sp|B4EPB7|TYPH_BURCJ Thymidine phosphorylase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=deoA PE=3 SV=1
Length = 438
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 145/217 (66%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E +R+KR G L +A FV G+ + Q+ A MA++ N L+ +E +ALT + D
Sbjct: 6 EFIRRKRDGQPLDRDGMAAFVRGVTDGSVTEGQVAAFAMAVYFNDLSTDERVALTLAQRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L WR D+ V+DKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGDVLDWRALDLDGPVIDKHSTGGVGDVVSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KL +IPGY V +T + + EVG I+G +L+P D+ +Y +RDVTATV+++++ +A
Sbjct: 126 KLSAIPGYDVMPATDAFRRTVREVGVAIIGQTARLAPADKRIYAIRDVTATVESVAMITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G LV+DVKVG +F T EK+ E+A
Sbjct: 186 SILSKKLAAGLDGLVMDVKVGSGAFMPTAEKSAELAR 222
>sp|B4EWA3|TYPH_PROMH Thymidine phosphorylase OS=Proteus mirabilis (strain HI4320)
GN=deoA PE=3 SV=1
Length = 440
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ L+ EI F+N T + QI A+ M ++ + +T E +ALT +M D
Sbjct: 6 EIIRKKRDGHPLTEEEIRFFINGVRDNTVSEGQIAALAMTIYFHDMTMPERVALTLAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L+W+ ++ +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLNWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPG+ + + + VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLEAIPGFDIFPDDEKFRDIIRHVGVAIIGQTNSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SIL KK+AEG LV+DVKVG +F TY+K++E+AE
Sbjct: 186 SILGKKLAEGLDALVMDVKVGSGAFMPTYQKSEELAE 222
>sp|Q7MI39|TYPH_VIBVY Thymidine phosphorylase OS=Vibrio vulnificus (strain YJ016) GN=deoA
PE=3 SV=2
Length = 442
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G L+ EI F+ T + QI A M +F N +T E IALT +M D
Sbjct: 6 EIIRKKRDGEALTADEINFFIQGVANNTVSEGQIAAFAMTIFFNEMTMPERIALTCAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG + W + +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGMVIDWSHMNFGGPIVDKHSTGGVGDVTSLMLGPMVAACGGFVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPGY + S E G I+G L+P D+ +Y RD+TATVDN+SL +A
Sbjct: 126 KLEAIPGYNITPSNDVFGQVTKEAGVAIIGQTGDLAPADKRVYATRDITATVDNISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G + LV+DVKVG +F TYE ++E+A+
Sbjct: 186 SILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAK 222
>sp|Q8DBT1|TYPH_VIBVU Thymidine phosphorylase OS=Vibrio vulnificus (strain CMCP6) GN=deoA
PE=3 SV=1
Length = 442
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G L+ EI F+ T + QI A M +F N +T E IALT +M D
Sbjct: 6 EIIRKKRDGEALTADEINFFIQGVANNTVSEGQIAAFAMTIFFNEMTMPERIALTCAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG + W + +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGMVIDWSHMNFGGPIVDKHSTGGVGDVTSLMLGPMVAACGGFVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPGY + S E G I+G L+P D+ +Y RD+TATVDN+SL +A
Sbjct: 126 KLEAIPGYNITPSNDVFGQVTKEAGVAIIGQTGDLAPADKRVYATRDITATVDNISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G + LV+DVKVG +F TYE ++E+A+
Sbjct: 186 SILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAK 222
>sp|B1KC83|TYPH_BURCC Thymidine phosphorylase OS=Burkholderia cenocepacia (strain MC0-3)
GN=deoA PE=3 SV=1
Length = 438
Score = 204 bits (519), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E +R+KR G L +A FV G+ + Q+ A MA++ N L+ +E +ALT + D
Sbjct: 6 EFIRRKRDGQPLDRDGMAAFVRGVTDGSVTEGQVAAFAMAVYFNDLSTDERVALTLAQRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L WR + V+DKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGDVLDWRALGLGGPVIDKHSTGGVGDVVSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KL +IPGY V T + + EVG I+G +L+P D+ +Y +RDVTATV+++++ +A
Sbjct: 126 KLSAIPGYDVMPDTDAFRRTVREVGVAIIGQTARLAPADKRIYAIRDVTATVESVAMITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G LV+DVKVG +F T EK+ E+A
Sbjct: 186 SILSKKLAAGLDGLVMDVKVGSGAFMPTAEKSAELAR 222
>sp|B7MTC8|TYPH_ECO81 Thymidine phosphorylase OS=Escherichia coli O81 (strain ED1a)
GN=deoA PE=3 SV=1
Length = 440
Score = 203 bits (517), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDDEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|A8FYQ8|TYPH_SHESH Thymidine phosphorylase OS=Shewanella sediminis (strain HAW-EB3)
GN=deoA PE=3 SV=1
Length = 443
Score = 203 bits (516), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+ LS EI FV T + QI A+ MA++ N + +E IALT SM D
Sbjct: 6 EIIRKKRNAEALSKEEIQFFVKGITDNTVSEGQIAALGMAVYFNDMNMDERIALTTSMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L+W+ D+ ++DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLNWKSLDLDGPIIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ +A + + E G I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYQTEPDSALFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLAAGLDALAMDVKVGSGAFMPTYEASEELAR 222
>sp|Q327L4|TYPH_SHIDS Thymidine phosphorylase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=deoA PE=3 SV=1
Length = 440
Score = 203 bits (516), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B4TH00|TYPH_SALHS Thymidine phosphorylase OS=Salmonella heidelberg (strain SL476)
GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ ++ +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +
Sbjct: 126 KLEAIPGFDIFPDDNRFREIIQDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITG 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE +K +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSKALAEAI 224
>sp|A8A8B1|TYPH_ECOHS Thymidine phosphorylase OS=Escherichia coli O9:H4 (strain HS)
GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7LEM8|TYPH_ECO55 Thymidine phosphorylase OS=Escherichia coli (strain 55989 / EAEC)
GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q3YU11|TYPH_SHISS Thymidine phosphorylase OS=Shigella sonnei (strain Ss046) GN=deoA
PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B2TZR5|TYPH_SHIB3 Thymidine phosphorylase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B1LEI7|TYPH_ECOSM Thymidine phosphorylase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B6I6M9|TYPH_ECOSE Thymidine phosphorylase OS=Escherichia coli (strain SE11) GN=deoA
PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7NH50|TYPH_ECOLU Thymidine phosphorylase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B1IS37|TYPH_ECOLC Thymidine phosphorylase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q8FA52|TYPH_ECOL6 Thymidine phosphorylase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=deoA PE=3 SV=2
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7LXU4|TYPH_ECO8A Thymidine phosphorylase OS=Escherichia coli O8 (strain IAI1)
GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7NW62|TYPH_ECO7I Thymidine phosphorylase OS=Escherichia coli O7:K1 (strain IAI39 /
ExPEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B5Z4R4|TYPH_ECO5E Thymidine phosphorylase OS=Escherichia coli O157:H7 (strain EC4115
/ EHEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q8XB35|TYPH_ECO57 Thymidine phosphorylase OS=Escherichia coli O157:H7 GN=deoA PE=3
SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|A7ZVS5|TYPH_ECO24 Thymidine phosphorylase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q31SV7|TYPH_SHIBS Thymidine phosphorylase OS=Shigella boydii serotype 4 (strain
Sb227) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7UR10|TYPH_ECO27 Thymidine phosphorylase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7LNS2|TYPH_ESCF3 Thymidine phosphorylase OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|P07650|TYPH_ECOLI Thymidine phosphorylase OS=Escherichia coli (strain K12) GN=deoA
PE=1 SV=3
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B1XFJ2|TYPH_ECODH Thymidine phosphorylase OS=Escherichia coli (strain K12 / DH10B)
GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|B7MNI9|TYPH_ECO45 Thymidine phosphorylase OS=Escherichia coli O45:K1 (strain S88 /
ExPEC) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q83P01|TYPH_SHIFL Thymidine phosphorylase OS=Shigella flexneri GN=deoA PE=3 SV=4
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|Q0SX29|TYPH_SHIF8 Thymidine phosphorylase OS=Shigella flexneri serotype 5b (strain
8401) GN=deoA PE=3 SV=1
Length = 440
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|A1RH88|TYPH_SHESW Thymidine phosphorylase OS=Shewanella sp. (strain W3-18-1) GN=deoA
PE=3 SV=1
Length = 443
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+G LSP EI FV T + QI A MA++ N + +E IALT +M D
Sbjct: 6 EIIRKKRNGLALSPAEIQFFVQGITTNAVSEGQIAAFGMAVYFNDMNMDERIALTTAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L+W+ + V+DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLNWQSLGLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ S+ + + EVG I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYQTEPSSELFRKVVKEVGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLACNLDALAMDVKVGSGAFMPTYEASEELAR 222
>sp|A4Y9A7|TYPH_SHEPC Thymidine phosphorylase OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=deoA PE=3 SV=1
Length = 443
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+G LSP EI FV T + QI A MA++ N + +E IALT +M D
Sbjct: 6 EIIRKKRNGLALSPAEIQFFVQGITTNAVSEGQIAAFGMAVYFNDMNMDERIALTTAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L+W+ + V+DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLNWQSLGLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ S+ + + EVG I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYQTEPSSELFRKVVKEVGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLACNLDALAMDVKVGSGAFMPTYEASEELAR 222
>sp|Q87M23|TYPH_VIBPA Thymidine phosphorylase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=deoA PE=3 SV=1
Length = 442
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G L+ EI F+ T + QI A M +F N +T +E IALT +M D
Sbjct: 6 EIIRKKRDGEVLTADEINFFIQGVANNTVSEGQIAAFAMTIFFNEMTMDERIALTCAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG + W + +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGMVIDWSHMNFGGPIVDKHSTGGVGDVTSLMLGPMVAACGGFVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPGY + + + G I+G L+P D+ +Y RD+TATVDN+SL +A
Sbjct: 126 KLEAIPGYNITPTNEVFGQVTKDAGVAIIGQTGDLAPADKRVYATRDITATVDNISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G + LV+DVKVG +F TYE ++E+A+
Sbjct: 186 SILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAK 222
>sp|B8CKI5|TYPH_SHEPW Thymidine phosphorylase OS=Shewanella piezotolerans (strain WP3 /
JCM 13877) GN=deoA PE=3 SV=1
Length = 443
Score = 202 bits (515), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+ LS EI FVN T + QI A+ MA++ N + +E IALT SM D
Sbjct: 6 EIIRKKRNAEVLSTEEIQFFVNGITNNTVSEGQIAALGMAVYFNDMNMDERIALTTSMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ D+ ++DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLDLNGPIIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGY +A + + E G I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYNTEPDSALFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLAAGLDALAMDVKVGTGAFMPTYEASEELAR 222
>sp|B1KRP7|TYPH_SHEWM Thymidine phosphorylase OS=Shewanella woodyi (strain ATCC 51908 /
MS32) GN=deoA PE=3 SV=1
Length = 443
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 3/217 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+ LS EI FV T + QI A+ MA++ N + +E IALT SM D
Sbjct: 6 EIIRKKRNAEALSKEEIQFFVKGITDNTVSEGQIAALGMAVYFNDMNMDERIALTTSMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ D+ ++DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWQSLDLNGPIIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ +A + + E G I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYQTEPDSALFRKVVKEAGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
SILSKK+A G L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLAAGLDALAMDVKVGSGAFMPTYEASEELAR 222
>sp|Q5QXT8|TYPH_IDILO Thymidine phosphorylase OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=deoA PE=3 SV=1
Length = 446
Score = 202 bits (514), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR LS +I +FVN + + QI A+ MA++ G++ +E ALT +M D
Sbjct: 6 EVIRKKRDAVSLSDTDIQQFVNGICDDSVSEGQIAALAMAIYFRGMSAQEKTALTVAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L WR +++ V+DKHSTGGVGD VS+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGDVLDWRQDNLNGPVLDKHSTGGVGDVVSLMLGPIVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ + + + G I+G +L+P D Y RDVTATV+++ L +A
Sbjct: 126 KFDAIPGYQTAPDNRRFRDTVKQAGVAIIGQTGRLAPADSRFYATRDVTATVESIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVK G +F Y++++E+A+ L
Sbjct: 186 SILAKKLAEGLDGLVMDVKAGNGAFMPGYDESRELAQSL 224
>sp|B4TU42|TYPH_SALSV Thymidine phosphorylase OS=Salmonella schwarzengrund (strain
CVM19633) GN=deoA PE=3 SV=1
Length = 440
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ ++ +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGSVLDWKSLNLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +
Sbjct: 126 KLEAIPGFDIFPDDNRFREIIQDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITG 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>sp|A7MGA9|TYPH_CROS8 Thymidine phosphorylase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=deoA PE=3 SV=1
Length = 440
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTVSEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ ++ VVDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLNLNGPVVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPG+ + + + VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLEAIPGFDIFPDDNRFRDIIKNVGVAIIGQTNSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TY ++E+A+ +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYALSEELAQAI 224
>sp|Q6D991|TYPH_ERWCT Thymidine phosphorylase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=deoA PE=3 SV=1
Length = 442
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 3/219 (1%)
Query: 4 IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
I E++RKKR G LS EI F+N T + QI A+ M ++ + ++ +E +ALT +M
Sbjct: 4 IQEIIRKKRDGKTLSEEEIRFFINGIRDNTVSEGQIAALAMTIYFHDMSMDERVALTLAM 63
Query: 64 VDSGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT 120
DSG L+W+ ++ +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGT
Sbjct: 64 RDSGTVLNWKSLNLNGPLVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGT 123
Query: 121 LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC 180
LDKLE+IPG + + + + +VG I+G L+P D+ Y RD+TATVD++ L
Sbjct: 124 LDKLEAIPGLDIFPNDDHFRRIIQQVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLI 183
Query: 181 SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
+ASIL+KK+AEG LV+DVKVG +F TYE ++++A+
Sbjct: 184 TASILAKKLAEGLDALVMDVKVGSGAFMPTYELSEQLAQ 222
>sp|B2VH51|TYPH_ERWT9 Thymidine phosphorylase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=deoA PE=3 SV=1
Length = 440
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 144/219 (65%), Gaps = 3/219 (1%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N + + QI A+ MA++ +T E +ALT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRSFINGVRDNSVSEGQIAALAMAIWFRDITLPERVALTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ D+ VVDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGSVLCWKGLDLNGPVVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE+IPG+ + S + + +VG IVG + L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLEAIPGFDIFPSDDRFREIIKQVGIAIVGQTRSLAPADKRFYATRDITATVDSIPLIAA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL KK+AEG LV+DVKVG + T E+++ +A+ +
Sbjct: 186 SILGKKLAEGLDALVMDVKVGSGALMPTLEQSEALAQAI 224
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,887,093
Number of Sequences: 539616
Number of extensions: 3135578
Number of successful extensions: 6731
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 6159
Number of HSP's gapped (non-prelim): 420
length of query: 221
length of database: 191,569,459
effective HSP length: 113
effective length of query: 108
effective length of database: 130,592,851
effective search space: 14104027908
effective search space used: 14104027908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)