Your job contains 1 sequence.
>psy1330
MSGIIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALT
KSMVDSGETLSWRPEDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGT
LDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLC
SASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1330
(221 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|P19971 - symbol:TYMP "Thymidine phosphorylase" ... 590 2.2e-57 1
RGD|1305756 - symbol:Tymp "thymidine phosphorylase" speci... 590 2.2e-57 1
UNIPROTKB|Q5FVR2 - symbol:Tymp "Thymidine phosphorylase" ... 590 2.2e-57 1
MGI|MGI:1920212 - symbol:Tymp "thymidine phosphorylase" s... 584 9.6e-57 1
UNIPROTKB|Q9KPL8 - symbol:deoA "Thymidine phosphorylase" ... 506 1.8e-48 1
TIGR_CMR|VC_2349 - symbol:VC_2349 "thymidine phosphorylas... 506 1.8e-48 1
UNIPROTKB|P07650 - symbol:deoA species:83333 "Escherichia... 505 2.3e-48 1
TIGR_CMR|CPS_1970 - symbol:CPS_1970 "thymidine phosphoryl... 504 2.9e-48 1
TIGR_CMR|SO_1218 - symbol:SO_1218 "thymidine phosphorylas... 492 5.4e-47 1
UNIPROTKB|Q3ABU8 - symbol:pdp "Pyrimidine-nucleoside phos... 459 1.7e-43 1
TIGR_CMR|CHY_1554 - symbol:CHY_1554 "pyrimidine-nucleosid... 459 1.7e-43 1
TIGR_CMR|SPO_2929 - symbol:SPO_2929 "thymidine phosphoryl... 451 1.2e-42 1
TIGR_CMR|BA_4307 - symbol:BA_4307 "pyrimidine-nucleoside ... 445 5.2e-42 1
TIGR_CMR|BA_1894 - symbol:BA_1894 "pyrimidine-nucleoside ... 443 8.4e-42 1
UNIPROTKB|C9JGI3 - symbol:TYMP "Thymidine phosphorylase" ... 267 9.3e-23 1
UNIPROTKB|P00904 - symbol:trpD "anthranilate synthase com... 123 4.0e-05 1
UNIPROTKB|Q9KST4 - symbol:trpD "Anthranilate phosphoribos... 118 7.3e-05 1
TIGR_CMR|VC_1172 - symbol:VC_1172 "anthranilate phosphori... 118 7.3e-05 1
UNIPROTKB|P66992 - symbol:trpD "Anthranilate phosphoribos... 118 8.9e-05 1
TIGR_CMR|CHY_1585 - symbol:CHY_1585 "anthranilate phospho... 114 0.00022 1
TIGR_CMR|CPS_3524 - symbol:CPS_3524 "anthranilate phospho... 109 0.00099 1
>UNIPROTKB|P19971 [details] [associations]
symbol:TYMP "Thymidine phosphorylase" species:9606 "Homo
sapiens" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0008083 "growth factor activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0009032 "thymidine phosphorylase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=TAS]
[GO:0005161 "platelet-derived growth factor receptor binding"
evidence=TAS] [GO:0006220 "pyrimidine nucleotide metabolic process"
evidence=TAS] [GO:0006260 "DNA replication" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006206 "pyrimidine
nucleobase metabolic process" evidence=TAS] [GO:0016763
"transferase activity, transferring pentosyl groups" evidence=EXP]
[GO:0043097 "pyrimidine nucleoside salvage" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046135 "pyrimidine nucleoside catabolic process" evidence=TAS]
[GO:0055086 "nucleobase-containing small molecule metabolic
process" evidence=TAS] UniPathway:UPA00578 Reactome:REACT_111217
InterPro:IPR000053 InterPro:IPR000312 InterPro:IPR013102
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0005829 GO:GO:0030154 GO:GO:0006260 GO:GO:0006206
GO:GO:0046135 GO:GO:0001525 GO:GO:0006935 GO:GO:0000002 EMBL:U62317
DrugBank:DB01248 DrugBank:DB01101 GO:GO:0043097 UniGene:Hs.730607
DrugBank:DB00544 DrugBank:DB00675 GO:GO:0006220 Orphanet:298
GO:GO:0005161 GO:GO:0004645 UniGene:Hs.180903 DrugBank:DB00795
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 EMBL:M63193 EMBL:AK225269
EMBL:BC018160 EMBL:BC052211 IPI:IPI00292858 PIR:S03904
RefSeq:NP_001107227.1 RefSeq:NP_001107228.1 RefSeq:NP_001244917.1
RefSeq:NP_001244918.1 RefSeq:NP_001944.1 PDB:1UOU PDB:2J0F PDB:2WK5
PDB:2WK6 PDBsum:1UOU PDBsum:2J0F PDBsum:2WK5 PDBsum:2WK6
ProteinModelPortal:P19971 SMR:P19971 IntAct:P19971 STRING:P19971
PhosphoSite:P19971 DMDM:67477361 OGP:P19971 PaxDb:P19971
PRIDE:P19971 DNASU:1890 Ensembl:ENST00000252029
Ensembl:ENST00000395678 Ensembl:ENST00000395680
Ensembl:ENST00000395681 GeneID:1890 KEGG:hsa:1890 UCSC:uc003bmb.4
CTD:1890 GeneCards:GC22M050964 HGNC:HGNC:3148 HPA:CAB002518
HPA:HPA001072 MIM:131222 MIM:603041 neXtProt:NX_P19971
PharmGKB:PA162407502 HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP
PhylomeDB:P19971 BRENDA:2.4.2.4 SABIO-RK:P19971 BindingDB:P19971
ChEMBL:CHEMBL3106 DrugBank:DB00322 EvolutionaryTrace:P19971
GenomeRNAi:1890 NextBio:7707 ArrayExpress:P19971 Bgee:P19971
CleanEx:HS_TYMP Genevestigator:P19971 GermOnline:ENSG00000025708
Uniprot:P19971
Length = 482
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 124/219 (56%), Positives = 155/219 (70%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR G LS +I FV V G+A+ +QIGAMLMA+ + G+ EET LT+++
Sbjct: 38 ELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQ 97
Query: 66 SGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG+ L W PE +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGRGL +GGTLD
Sbjct: 98 SGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRGLGHTGGTLD 156
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ V S ++ L + GC IVG ++QL P D ILY RDVTATVD+L L +A
Sbjct: 157 KLESIPGFNVIQSPEQMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDSLPLITA 216
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SILSKK+ EG LV+DVK G A+ F E+A+E+A+ L
Sbjct: 217 SILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 255
>RGD|1305756 [details] [associations]
symbol:Tymp "thymidine phosphorylase" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004645 "phosphorylase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006206 "pyrimidine
nucleobase metabolic process" evidence=IEA] [GO:0006213 "pyrimidine
nucleoside metabolic process" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009032 "thymidine
phosphorylase activity" evidence=IEA] [GO:0016154
"pyrimidine-nucleoside phosphorylase activity" evidence=IEA]
UniPathway:UPA00578 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 SMART:SM00941 Pfam:PF02885 RGD:1305756
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
HOGENOM:HOG000047313 KO:K00758 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 CTD:1890 HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP
GeneTree:ENSGT00390000009250 OMA:MDNPLGR EMBL:BC089830
IPI:IPI00361478 RefSeq:NP_001012122.1 UniGene:Rn.219088 HSSP:P19971
ProteinModelPortal:Q5FVR2 SMR:Q5FVR2 STRING:Q5FVR2
PhosphoSite:Q5FVR2 PRIDE:Q5FVR2 Ensembl:ENSRNOT00000040541
GeneID:315219 KEGG:rno:315219 InParanoid:Q5FVR2
ChEMBL:CHEMBL1075244 NextBio:668926 ArrayExpress:Q5FVR2
Genevestigator:Q5FVR2 Uniprot:Q5FVR2
Length = 476
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 122/218 (55%), Positives = 155/218 (71%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR+G LS +I FV+ + G A+D+QIGAMLMA+ + G+ EET LT+++ +
Sbjct: 31 ELIRLKRNGGHLSEADIRNFVHALMDGRAQDTQIGAMLMAIRLQGMDLEETSVLTQALAE 90
Query: 66 SGETLSWRP--EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
SG+ L W +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGR L +GGTLDK
Sbjct: 91 SGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDK 150
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
LESIPG+ V S + L EVGC IVG +++L P D ILY RDVTATVD++ L +AS
Sbjct: 151 LESIPGFSVTQSPEQMLQILEEVGCCIVGQSEKLVPADGILYAARDVTATVDSVPLITAS 210
Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ILSKK EG LV+DVK G A+ F EKA+E+A++L
Sbjct: 211 ILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKML 248
>UNIPROTKB|Q5FVR2 [details] [associations]
symbol:Tymp "Thymidine phosphorylase" species:10116 "Rattus
norvegicus" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=IEA] UniPathway:UPA00578 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 SMART:SM00941
Pfam:PF02885 RGD:1305756 GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 CTD:1890 HOVERGEN:HBG000082
OrthoDB:EOG4DJJWP GeneTree:ENSGT00390000009250 OMA:MDNPLGR
EMBL:BC089830 IPI:IPI00361478 RefSeq:NP_001012122.1
UniGene:Rn.219088 HSSP:P19971 ProteinModelPortal:Q5FVR2 SMR:Q5FVR2
STRING:Q5FVR2 PhosphoSite:Q5FVR2 PRIDE:Q5FVR2
Ensembl:ENSRNOT00000040541 GeneID:315219 KEGG:rno:315219
InParanoid:Q5FVR2 ChEMBL:CHEMBL1075244 NextBio:668926
ArrayExpress:Q5FVR2 Genevestigator:Q5FVR2 Uniprot:Q5FVR2
Length = 476
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 122/218 (55%), Positives = 155/218 (71%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR+G LS +I FV+ + G A+D+QIGAMLMA+ + G+ EET LT+++ +
Sbjct: 31 ELIRLKRNGGHLSEADIRNFVHALMDGRAQDTQIGAMLMAIRLQGMDLEETSVLTQALAE 90
Query: 66 SGETLSWRP--EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
SG+ L W +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGR L +GGTLDK
Sbjct: 91 SGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDK 150
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
LESIPG+ V S + L EVGC IVG +++L P D ILY RDVTATVD++ L +AS
Sbjct: 151 LESIPGFSVTQSPEQMLQILEEVGCCIVGQSEKLVPADGILYAARDVTATVDSVPLITAS 210
Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ILSKK EG LV+DVK G A+ F EKA+E+A++L
Sbjct: 211 ILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKML 248
>MGI|MGI:1920212 [details] [associations]
symbol:Tymp "thymidine phosphorylase" species:10090 "Mus
musculus" [GO:0004645 "phosphorylase activity" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0006935 "chemotaxis" evidence=TAS] [GO:0008152 "metabolic
process" evidence=TAS] [GO:0009032 "thymidine phosphorylase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0016154 "pyrimidine-nucleoside phosphorylase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016763 "transferase activity,
transferring pentosyl groups" evidence=IEA] UniPathway:UPA00578
InterPro:IPR000053 InterPro:IPR000312 InterPro:IPR013102
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
SMART:SM00941 Pfam:PF02885 MGI:MGI:1920212 GO:GO:0006206
GO:GO:0006935 GO:GO:0009887 GO:GO:0006213 GO:GO:0004645
UniGene:Mm.287977 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313
KO:K00758 GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30
PANTHER:PTHR10515 SUPFAM:SSF54680 TIGRFAMs:TIGR02644 CTD:1890
HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP EMBL:AB060274 IPI:IPI00118064
RefSeq:NP_612175.1 ProteinModelPortal:Q99N42 SMR:Q99N42
STRING:Q99N42 PhosphoSite:Q99N42 PRIDE:Q99N42 DNASU:72962
Ensembl:ENSMUST00000023285 GeneID:72962 KEGG:mmu:72962
UCSC:uc007xgl.2 GeneTree:ENSGT00390000009250 InParanoid:Q99N42
OMA:MDNPLGR SABIO-RK:Q99N42 BindingDB:Q99N42 ChEMBL:CHEMBL2606
NextBio:337237 Bgee:Q99N42 CleanEx:MM_TYMP Genevestigator:Q99N42
GermOnline:ENSMUSG00000022615 Uniprot:Q99N42
Length = 471
Score = 584 (210.6 bits), Expect = 9.6e-57, P = 9.6e-57
Identities = 121/218 (55%), Positives = 152/218 (69%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR G L +I FV+ + G A+D+QIGAMLMA+ + G+ EET LT+++ +
Sbjct: 24 ELIRLKRDGGHLREADIRNFVHAVIDGRAQDTQIGAMLMAIRLQGMNLEETSVLTRALAE 83
Query: 66 SGETLSWRP--EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDK 123
SG+ L W +VDKHSTGGVGDKVS+ L PALAACG KVPM+SGR L +GGTLDK
Sbjct: 84 SGQQLEWPKAWHQQLVDKHSTGGVGDKVSLVLAPALAACGCKVPMISGRSLGHTGGTLDK 143
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSAS 183
LESIPG+ V S + L EVGC IVG + +L P D ILY RDVTATVD++ L +AS
Sbjct: 144 LESIPGFGVTQSPEQMLHILEEVGCCIVGQSAKLVPADGILYAARDVTATVDSVPLITAS 203
Query: 184 ILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
ILSKK EG LV+DVK G A+ F EKA+E+A++L
Sbjct: 204 ILSKKAVEGLSTLVVDVKFGGAAVFPDQEKARELAKML 241
>UNIPROTKB|Q9KPL8 [details] [associations]
symbol:deoA "Thymidine phosphorylase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0009032 "thymidine phosphorylase activity" evidence=ISS]
UniPathway:UPA00578 HAMAP:MF_01628 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR013465
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0006206 GO:GO:0006139 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR PIR:E82087
RefSeq:NP_231979.2 ProteinModelPortal:Q9KPL8 SMR:Q9KPL8
DNASU:2613145 GeneID:2613145 KEGG:vch:VC2349 PATRIC:20083723
Uniprot:Q9KPL8
Length = 448
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 107/218 (49%), Positives = 144/218 (66%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++R+KR G L+ EI F+ T + QI A MA+F +T E IALT +M D
Sbjct: 12 EIIRRKRDGEVLTNDEINFFIQGVANNTVSEGQIAAFAMAIFFREMTMPERIALTCAMRD 71
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG + W + +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 72 SGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 131
Query: 123 KLESIPGYQVNCSTADLKAKLS-EVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCS 181
KLE+IPGY + T D+ K++ + G I+G L+P D+ +Y RD+TATVDN+SL +
Sbjct: 132 KLEAIPGYNIT-PTNDVFGKVTKQAGVAIIGQTGDLAPADKRVYATRDITATVDNISLIT 190
Query: 182 ASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
ASILSKK+A G + LV+DVKVG +F TYE ++E+A+
Sbjct: 191 ASILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAK 228
>TIGR_CMR|VC_2349 [details] [associations]
symbol:VC_2349 "thymidine phosphorylase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0009032 "thymidine phosphorylase activity" evidence=ISS]
UniPathway:UPA00578 HAMAP:MF_01628 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR013465
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0006206 GO:GO:0006139 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR PIR:E82087
RefSeq:NP_231979.2 ProteinModelPortal:Q9KPL8 SMR:Q9KPL8
DNASU:2613145 GeneID:2613145 KEGG:vch:VC2349 PATRIC:20083723
Uniprot:Q9KPL8
Length = 448
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 107/218 (49%), Positives = 144/218 (66%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++R+KR G L+ EI F+ T + QI A MA+F +T E IALT +M D
Sbjct: 12 EIIRRKRDGEVLTNDEINFFIQGVANNTVSEGQIAAFAMAIFFREMTMPERIALTCAMRD 71
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG + W + +VDKHSTGGVGD S+ L P +AACG VPM+SGRGL +GGTLD
Sbjct: 72 SGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTGGTLD 131
Query: 123 KLESIPGYQVNCSTADLKAKLS-EVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCS 181
KLE+IPGY + T D+ K++ + G I+G L+P D+ +Y RD+TATVDN+SL +
Sbjct: 132 KLEAIPGYNIT-PTNDVFGKVTKQAGVAIIGQTGDLAPADKRVYATRDITATVDNISLIT 190
Query: 182 ASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
ASILSKK+A G + LV+DVKVG +F TYE ++E+A+
Sbjct: 191 ASILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAK 228
>UNIPROTKB|P07650 [details] [associations]
symbol:deoA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0016763 "transferase activity, transferring pentosyl groups"
evidence=IEA] [GO:0016154 "pyrimidine-nucleoside phosphorylase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic process"
evidence=IEA] [GO:0006206 "pyrimidine nucleobase metabolic process"
evidence=IEA] [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009032 "thymidine
phosphorylase activity" evidence=IEA] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006206 GO:GO:0006974 EMBL:U14003
EMBL:X00742 EMBL:X03224 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 PIR:S56606 RefSeq:NP_418799.1
RefSeq:YP_492512.1 PDB:1AZY PDB:1OTP PDB:1TPT PDB:2TPT PDBsum:1AZY
PDBsum:1OTP PDBsum:1TPT PDBsum:2TPT ProteinModelPortal:P07650
SMR:P07650 DIP:DIP-9426N IntAct:P07650 PRIDE:P07650
EnsemblBacteria:EBESCT00000000226 EnsemblBacteria:EBESCT00000017997
GeneID:12933785 GeneID:948901 KEGG:ecj:Y75_p4266 KEGG:eco:b4382
PATRIC:32124380 EchoBASE:EB0215 EcoGene:EG10219 OMA:LMAIYFR
BioCyc:EcoCyc:DEOA-MONOMER BioCyc:ECOL316407:JW4345-MONOMER
BioCyc:MetaCyc:DEOA-MONOMER BindingDB:P07650 ChEMBL:CHEMBL3726
EvolutionaryTrace:P07650 Genevestigator:P07650 Uniprot:P07650
Length = 440
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/219 (47%), Positives = 143/219 (65%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR G+ LS EI F+N T + QI A+ M +F + +T E ++LT +M D
Sbjct: 6 EIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAMTIFFHDMTMPERVSLTMAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L W+ + +VDKHSTGGVGD S+ L P +AACG +PM+SGRGL +GGTLD
Sbjct: 66 SGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMVAACGGYIPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLESIPG+ + + + +VG I+G L+P D+ Y RD+TATVD++ L +A
Sbjct: 126 KLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSLAPADKRFYATRDITATVDSIPLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SIL+KK+AEG LV+DVKVG +F TYE ++ +AE +
Sbjct: 186 SILAKKLAEGLDALVMDVKVGSGAFMPTYELSEALAEAI 224
>TIGR_CMR|CPS_1970 [details] [associations]
symbol:CPS_1970 "thymidine phosphorylase" species:167879
"Colwellia psychrerythraea 34H" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0006206
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 RefSeq:YP_268700.1 ProteinModelPortal:Q483R6
SMR:Q483R6 STRING:Q483R6 GeneID:3520590 KEGG:cps:CPS_1970
PATRIC:21467071 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
OMA:VARETHV ProtClustDB:PRK05820
BioCyc:CPSY167879:GI48-2040-MONOMER GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 Uniprot:Q483R6
Length = 438
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 107/215 (49%), Positives = 141/215 (65%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++R KR G L I FV+ V G DSQ+GAM MA+F G++ +E + TK+M+
Sbjct: 11 EIIRLKRDGKILDEQAINGFVSGLVDGNFSDSQVGAMAMAIFQQGMSIDERVNFTKAMMR 70
Query: 66 SGETLSWRPED-IVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKL 124
SGE LSW D +VDKHSTGGVGDKVS L +AACG VPM+SGRGL +GGT DKL
Sbjct: 71 SGEVLSWEGFDGPIVDKHSTGGVGDKVSFMLAAIVAACGGYVPMISGRGLGHTGGTADKL 130
Query: 125 ESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASI 184
ESI G+ V S ++ K + +VG I+ L+P D+ LY +RDVTATV+++ L +ASI
Sbjct: 131 ESIAGFNVQPSISEFKRIVKDVGVAIISQTDNLAPADKRLYSIRDVTATVESIPLITASI 190
Query: 185 LSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAE 219
LSKK+A G LV+DVKVG + + AK +A+
Sbjct: 191 LSKKLAAGLDVLVMDVKVGNGAMMNNLDDAKALAQ 225
>TIGR_CMR|SO_1218 [details] [associations]
symbol:SO_1218 "thymidine phosphorylase" species:211586
"Shewanella oneidensis MR-1" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0006206
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR
RefSeq:NP_716841.1 ProteinModelPortal:Q8EHK3 SMR:Q8EHK3
GeneID:1169045 KEGG:son:SO_1218 PATRIC:23522094 Uniprot:Q8EHK3
Length = 443
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 104/216 (48%), Positives = 142/216 (65%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E++RKKR+G LS EI FV T + QI A+ MA++ N + +E IALT +M D
Sbjct: 6 EIIRKKRNGLVLSAEEIQFFVKGITTNAVSEGQIAALGMAVYFNDMNMDERIALTTAMRD 65
Query: 66 SGETLSWRPEDI---VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
SG L+W+ ++ V+DKHSTGGVGD +S+ L P AACG VPM+SGRGL +GGTLD
Sbjct: 66 SGTVLNWQSLNLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTGGTLD 125
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
K ++IPGYQ S+ + + +VG I+G L P D+ Y +RD TATV+++SL +A
Sbjct: 126 KFDAIPGYQTEPSSELFRKVVKDVGVAIIGQTGDLVPADKRFYSIRDNTATVESISLITA 185
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMA 218
SILSKK+A L +DVKVG +F TYE ++E+A
Sbjct: 186 SILSKKLACSLDALAMDVKVGSGAFMPTYEASEELA 221
>UNIPROTKB|Q3ABU8 [details] [associations]
symbol:pdp "Pyrimidine-nucleoside phosphorylase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_360386.1
ProteinModelPortal:Q3ABU8 SMR:Q3ABU8 STRING:Q3ABU8 GeneID:3728433
KEGG:chy:CHY_1554 PATRIC:21276235 HOGENOM:HOG000047312 KO:K00756
BioCyc:CHYD246194:GJCN-1553-MONOMER Uniprot:Q3ABU8
Length = 442
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 95/217 (43%), Positives = 142/217 (65%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
+++ KKR+G +LS EI FV+ G D Q+ A LMA++ G+ +EE LT +MV+
Sbjct: 5 DIILKKRNGEKLSKEEIYFFVHGFTRGEIPDYQMAAFLMAVYFQGMDDEEVADLTMAMVE 64
Query: 66 SGETLSWRP-EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKL 124
SG+ + I VDKHSTGGVGDK ++ L P +AA G+ V +SGRGL +GGTLDKL
Sbjct: 65 SGDKVDLSAISGIKVDKHSTGGVGDKTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTLDKL 124
Query: 125 ESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASI 184
ESI G+ V S + +++++G ++G +L+P D +Y +RDVTATVD+L L ++SI
Sbjct: 125 ESIAGFNVALSPEEFIKQVNDIGIAVIGQTAKLAPADGKMYALRDVTATVDSLPLIASSI 184
Query: 185 LSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
+SKK+A G +V+DVK G +F K E + ++A+ +
Sbjct: 185 MSKKIAGGADAIVLDVKTGSGAFMKDLEGSIQLAQAM 221
>TIGR_CMR|CHY_1554 [details] [associations]
symbol:CHY_1554 "pyrimidine-nucleoside phosphorylase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_360386.1
ProteinModelPortal:Q3ABU8 SMR:Q3ABU8 STRING:Q3ABU8 GeneID:3728433
KEGG:chy:CHY_1554 PATRIC:21276235 HOGENOM:HOG000047312 KO:K00756
BioCyc:CHYD246194:GJCN-1553-MONOMER Uniprot:Q3ABU8
Length = 442
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 95/217 (43%), Positives = 142/217 (65%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
+++ KKR+G +LS EI FV+ G D Q+ A LMA++ G+ +EE LT +MV+
Sbjct: 5 DIILKKRNGEKLSKEEIYFFVHGFTRGEIPDYQMAAFLMAVYFQGMDDEEVADLTMAMVE 64
Query: 66 SGETLSWRP-EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKL 124
SG+ + I VDKHSTGGVGDK ++ L P +AA G+ V +SGRGL +GGTLDKL
Sbjct: 65 SGDKVDLSAISGIKVDKHSTGGVGDKTTLVLAPLVAAVGVPVAKMSGRGLGHTGGTLDKL 124
Query: 125 ESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASI 184
ESI G+ V S + +++++G ++G +L+P D +Y +RDVTATVD+L L ++SI
Sbjct: 125 ESIAGFNVALSPEEFIKQVNDIGIAVIGQTAKLAPADGKMYALRDVTATVDSLPLIASSI 184
Query: 185 LSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
+SKK+A G +V+DVK G +F K E + ++A+ +
Sbjct: 185 MSKKIAGGADAIVLDVKTGSGAFMKDLEGSIQLAQAM 221
>TIGR_CMR|SPO_2929 [details] [associations]
symbol:SPO_2929 "thymidine phosphorylase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 HOGENOM:HOG000047313 KO:K00758 ProtClustDB:PRK05820
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_168137.1
ProteinModelPortal:Q5LPB9 GeneID:3195037 KEGG:sil:SPO2929
PATRIC:23379287 Uniprot:Q5LPB9
Length = 436
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 94/201 (46%), Positives = 129/201 (64%)
Query: 18 SPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWRPEDI 77
S E+ F G+ D+Q GA M + + L +E ALT +M D+G+ L W +
Sbjct: 17 SAAELTWFAQGLADGSVSDAQAGAFAMGVCMGRLGSEGRAALTLAMRDTGDVLHWDFDGP 76
Query: 78 VVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLDKLESIPGYQVNCSTA 137
V+DKHSTGGVGD VS+ L PALA CG VPM+SGRGL +GGTLDK+E+IPG
Sbjct: 77 VIDKHSTGGVGDCVSLVLAPALAECGTYVPMISGRGLGHTGGTLDKMEAIPGVTTQLGPD 136
Query: 138 DLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSASILSKKVAEGTKYLV 197
L + + G IVGA +++P D+ LY +RDVTATV++L L +ASILSKK+A LV
Sbjct: 137 RLAQVVRDTGAAIVGATARIAPADKRLYAIRDVTATVESLDLITASILSKKLAASPDALV 196
Query: 198 IDVKVGEASFFKTYEKAKEMA 218
+DVK+G +F K+ ++A+ +A
Sbjct: 197 LDVKLGSGAFMKSPDEARALA 217
>TIGR_CMR|BA_4307 [details] [associations]
symbol:BA_4307 "pyrimidine-nucleoside phosphorylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 HOGENOM:HOG000047312 KO:K00756
RefSeq:NP_846540.1 RefSeq:YP_020952.1 RefSeq:YP_030245.1
HSSP:P77836 ProteinModelPortal:Q81ME2 SMR:Q81ME2 IntAct:Q81ME2
DNASU:1087465 EnsemblBacteria:EBBACT00000012693
EnsemblBacteria:EBBACT00000017985 EnsemblBacteria:EBBACT00000020465
GeneID:1087465 GeneID:2820098 GeneID:2849826 KEGG:ban:BA_4307
KEGG:bar:GBAA_4307 KEGG:bat:BAS3995 OMA:SEEIQFF
ProtClustDB:PRK06078 BioCyc:BANT260799:GJAJ-4052-MONOMER
BioCyc:BANT261594:GJ7F-4191-MONOMER Uniprot:Q81ME2
Length = 434
Score = 445 (161.7 bits), Expect = 5.2e-42, P = 5.2e-42
Identities = 91/219 (41%), Positives = 140/219 (63%)
Query: 4 IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
+++L+ KKR G+ L+ EI V G D Q+ ++ MA+F + ++E LT +M
Sbjct: 3 MVDLIAKKRDGHALTTEEINFIVEGYTNGDIPDYQVSSLAMAIFFQDMNDQERADLTMAM 62
Query: 64 VDSGETLSWRP-EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
V+SG+T+ E + VDKHSTGGVGD ++ L P +AA G+ V +SGRGL +GGT+D
Sbjct: 63 VNSGDTIDLSAIEGVKVDKHSTGGVGDITTLVLGPLVAALGVPVAKMSGRGLGHTGGTID 122
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE++PG+ V + ++E ++G + L+P D+ LY +RDVTATV+++ L ++
Sbjct: 123 KLEAVPGFHVEIENDEFMRLVNENKIAVIGQSGNLTPADKKLYALRDVTATVNSIPLIAS 182
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SI+SKK+A G +V+DVK G +F KT E AK +AE +
Sbjct: 183 SIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAKRLAEAM 221
>TIGR_CMR|BA_1894 [details] [associations]
symbol:BA_1894 "pyrimidine-nucleoside phosphorylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 OMA:LMAIYFR HOGENOM:HOG000047312
KO:K00756 HSSP:P77836 ProtClustDB:PRK06078 RefSeq:NP_844305.1
RefSeq:YP_018538.1 RefSeq:YP_028020.1 ProteinModelPortal:Q81RZ1
SMR:Q81RZ1 DNASU:1086440 EnsemblBacteria:EBBACT00000008544
EnsemblBacteria:EBBACT00000014934 EnsemblBacteria:EBBACT00000023229
GeneID:1086440 GeneID:2816973 GeneID:2851407 KEGG:ban:BA_1894
KEGG:bar:GBAA_1894 KEGG:bat:BAS1756
BioCyc:BANT260799:GJAJ-1825-MONOMER
BioCyc:BANT261594:GJ7F-1899-MONOMER Uniprot:Q81RZ1
Length = 433
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 91/219 (41%), Positives = 138/219 (63%)
Query: 4 IIELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSM 63
+++++ KKR G EL+ EI F+N G+ D Q+ A+ MA+F +T+ E LT +M
Sbjct: 3 MVDIIAKKRDGKELTTEEIKFFINGYTDGSIPDYQVSALAMAIFFKDMTDRERADLTMAM 62
Query: 64 VDSGETLSWRP-EDIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMVSGRGLDFSGGTLD 122
V+SGET+ E I VDKHSTGGVGD ++ L P +AA + V +SGRGL +GGT+D
Sbjct: 63 VESGETIDLSAIEGIKVDKHSTGGVGDTTTLVLGPLVAALDVPVAKMSGRGLGHTGGTID 122
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDNLSLCSA 182
KLE++ G+ V + ++ ++G L+P D+ +Y +RDVT TV+++ L ++
Sbjct: 123 KLEAVEGFHVEITKEQFIDIVNRDKVAVIGQTGNLTPADKKIYALRDVTGTVNSIPLIAS 182
Query: 183 SILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
SI+SKK+A G +V+DVK G +F KT E AKE+A +
Sbjct: 183 SIMSKKIAAGADAIVLDVKTGAGAFMKTEEDAKELAHAM 221
>UNIPROTKB|C9JGI3 [details] [associations]
symbol:TYMP "Thymidine phosphorylase" species:9606 "Homo
sapiens" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0016763 "transferase activity, transferring pentosyl groups"
evidence=IEA] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
SMART:SM00941 Pfam:PF02885 GO:GO:0006206 GO:GO:0016763 EMBL:U62317
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 HOGENOM:HOG000047313
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
HGNC:HGNC:3148 IPI:IPI00853163 ProteinModelPortal:C9JGI3 SMR:C9JGI3
STRING:C9JGI3 PRIDE:C9JGI3 Ensembl:ENST00000425169
ArrayExpress:C9JGI3 Bgee:C9JGI3 Uniprot:C9JGI3
Length = 445
Score = 267 (99.0 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 57/107 (53%), Positives = 74/107 (69%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
EL+R KR G LS +I FV V G+A+ +QIGAMLMA+ + G+ EET LT+++
Sbjct: 38 ELIRMKRDGGRLSEADIRGFVAAVVNGSAQGAQIGAMLMAIRLRGMDLEETSVLTQALAQ 97
Query: 66 SGETLSWRPE---DIVVDKHSTGGVGDKVSIPLVPALAACGLKVPMV 109
SG+ L W PE +VDKHSTGGVGDKVS+ L PALAACG K+ ++
Sbjct: 98 SGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAPALAACGCKMQVL 143
Score = 227 (85.0 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 49/105 (46%), Positives = 67/105 (63%)
Query: 117 SGGTLDKLESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDVTATVDN 176
+GG DK+ + + ++ L + GC IVG ++QL P D ILY RDVTATVD+
Sbjct: 118 TGGVGDKVSLVLAPALAACGCKMQVLLDQAGCCIVGQSEQLVPADGILYAARDVTATVDS 177
Query: 177 LSLCSASILSKKVAEGTKYLVIDVKVGEASFFKTYEKAKEMAELL 221
L L +ASILSKK+ EG LV+DVK G A+ F E+A+E+A+ L
Sbjct: 178 LPLITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQARELAKTL 222
>UNIPROTKB|P00904 [details] [associations]
symbol:trpD "anthranilate synthase component II"
species:83333 "Escherichia coli K-12" [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0004048 "anthranilate
phosphoribosyltransferase activity" evidence=IEA;IDA] [GO:0004049
"anthranilate synthase activity" evidence=IEA;IDA] [GO:0000162
"tryptophan biosynthetic process" evidence=IEA;IDA;IMP]
InterPro:IPR000312 InterPro:IPR005940 InterPro:IPR006221
Pfam:PF00591 UniPathway:UPA00035 HAMAP:MF_00211 Pfam:PF00117
Pfam:PF02885 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006541 GO:GO:0000162
InterPro:IPR017926 PROSITE:PS51273 EMBL:J01714 TIGRFAMs:TIGR00566
EMBL:V00372 eggNOG:COG0547 HOGENOM:HOG000230451 GO:GO:0004048
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 TIGRFAMs:TIGR01245 GO:GO:0004049 EMBL:V00367
PIR:B64874 RefSeq:NP_415779.1 RefSeq:YP_489531.1
ProteinModelPortal:P00904 SMR:P00904 MEROPS:C26.960
SWISS-2DPAGE:P00904 PRIDE:P00904 EnsemblBacteria:EBESCT00000002039
EnsemblBacteria:EBESCT00000016289 GeneID:12931129 GeneID:945109
KEGG:ecj:Y75_p1237 KEGG:eco:b1263 PATRIC:32117786 EchoBASE:EB1020
EcoGene:EG11027 KO:K13497 OMA:GPKHPKD ProtClustDB:PRK09522
BioCyc:EcoCyc:ANTHRANSYNCOMPII-MONOMER
BioCyc:ECOL316407:JW1255-MONOMER
BioCyc:MetaCyc:ANTHRANSYNCOMPII-MONOMER Genevestigator:P00904
Uniprot:P00904
Length = 531
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 40/148 (27%), Positives = 66/148 (44%)
Query: 7 LLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDS 66
+L K LS E + + V G + Q+ A L++M I G E +++++
Sbjct: 203 ILEKLYQAQTLSQQESHQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLEN 262
Query: 67 GETLSWRPEDIVVDKHSTGGVG-DKVSIPLVPAL--AACGLKVPMVSGRGLDFSGGTLDK 123
RP+ + D TGG G + ++I A AACGLKV R + G+ D
Sbjct: 263 AAPFP-RPDYLFADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDL 321
Query: 124 LESIPGYQVNCSTADLKAKLSEVG-CFI 150
L + G ++ + + L E+G CF+
Sbjct: 322 LAAF-GINLDMNADKSRQALDELGVCFL 348
>UNIPROTKB|Q9KST4 [details] [associations]
symbol:trpD "Anthranilate phosphoribosyltransferase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004048 "anthranilate phosphoribosyltransferase activity"
evidence=ISS] InterPro:IPR000312 InterPro:IPR005940 Pfam:PF00591
UniPathway:UPA00035 HAMAP:MF_00211 Pfam:PF02885 EMBL:AE003852
GenomeReviews:AE003852_GR KO:K00766 GO:GO:0000162 eggNOG:COG0547
OMA:AMKHAIG GO:GO:0004048 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 TIGRFAMs:TIGR01245
ProtClustDB:PRK00188 PIR:G82232 RefSeq:NP_230817.2
ProteinModelPortal:Q9KST4 SMR:Q9KST4 DNASU:2614605 GeneID:2614605
KEGG:vch:VC1172 PATRIC:20081436 Uniprot:Q9KST4
Length = 332
Score = 118 (46.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/176 (26%), Positives = 75/176 (42%)
Query: 7 LLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDS 66
++ K L+ E + + + G + + A+L A+ I G T +E K+++ +
Sbjct: 4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLAN 63
Query: 67 GETLSWRPEDIVVDKHSTGGVGDK-VSIPLVPAL--AACGLKVPMVSGRGLDFSGGTLDK 123
RP+ D TGG G ++I A AACG+KV RG+ G+ D
Sbjct: 64 ANPFP-RPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDL 122
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDV--TATVDNL 177
L S G + S D + L ++G + A Q G + VR T T+ N+
Sbjct: 123 LSSF-GINLAMSAQDSRQALDDLGVAFLFA-PQYHGGVRHAMPVRQTMKTRTIFNI 176
>TIGR_CMR|VC_1172 [details] [associations]
symbol:VC_1172 "anthranilate phosphoribosyltransferase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004048
"anthranilate phosphoribosyltransferase activity" evidence=ISS]
InterPro:IPR000312 InterPro:IPR005940 Pfam:PF00591
UniPathway:UPA00035 HAMAP:MF_00211 Pfam:PF02885 EMBL:AE003852
GenomeReviews:AE003852_GR KO:K00766 GO:GO:0000162 eggNOG:COG0547
OMA:AMKHAIG GO:GO:0004048 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 TIGRFAMs:TIGR01245
ProtClustDB:PRK00188 PIR:G82232 RefSeq:NP_230817.2
ProteinModelPortal:Q9KST4 SMR:Q9KST4 DNASU:2614605 GeneID:2614605
KEGG:vch:VC1172 PATRIC:20081436 Uniprot:Q9KST4
Length = 332
Score = 118 (46.6 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 46/176 (26%), Positives = 75/176 (42%)
Query: 7 LLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDS 66
++ K L+ E + + + G + + A+L A+ I G T +E K+++ +
Sbjct: 4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLAN 63
Query: 67 GETLSWRPEDIVVDKHSTGGVGDK-VSIPLVPAL--AACGLKVPMVSGRGLDFSGGTLDK 123
RP+ D TGG G ++I A AACG+KV RG+ G+ D
Sbjct: 64 ANPFP-RPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDL 122
Query: 124 LESIPGYQVNCSTADLKAKLSEVGCFIVGANKQLSPGDQILYRVRDV--TATVDNL 177
L S G + S D + L ++G + A Q G + VR T T+ N+
Sbjct: 123 LSSF-GINLAMSAQDSRQALDDLGVAFLFA-PQYHGGVRHAMPVRQTMKTRTIFNI 176
>UNIPROTKB|P66992 [details] [associations]
symbol:trpD "Anthranilate phosphoribosyltransferase"
species:1773 "Mycobacterium tuberculosis" [GO:0005576
"extracellular region" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR000312
InterPro:IPR005940 Pfam:PF00591 UniPathway:UPA00035 HAMAP:MF_00211
Pfam:PF02885 GO:GO:0005886 GO:GO:0040007 GO:GO:0005576
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842579 KO:K00766 GO:GO:0000162 eggNOG:COG0547
HOGENOM:HOG000230451 GO:GO:0004048 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418
TIGRFAMs:TIGR01245 ProtClustDB:PRK00188 PIR:A70784
RefSeq:NP_216708.1 RefSeq:NP_336720.1 RefSeq:YP_006515612.1
PDB:1ZVW PDB:2BPQ PDB:3QQS PDB:3QR9 PDB:3QS8 PDB:3QSA PDB:3R6C
PDB:3R88 PDB:3TWP PDB:3UU1 PDBsum:1ZVW PDBsum:2BPQ PDBsum:3QQS
PDBsum:3QR9 PDBsum:3QS8 PDBsum:3QSA PDBsum:3R6C PDBsum:3R88
PDBsum:3TWP PDBsum:3UU1 ProteinModelPortal:P66992 SMR:P66992
PRIDE:P66992 EnsemblBacteria:EBMYCT00000002072
EnsemblBacteria:EBMYCT00000070584 GeneID:13318881 GeneID:887681
GeneID:924178 KEGG:mtc:MT2248 KEGG:mtu:Rv2192c KEGG:mtv:RVBD_2192c
PATRIC:18126698 TubercuList:Rv2192c OMA:MKNVGPT
EvolutionaryTrace:P66992 Uniprot:P66992
Length = 370
Score = 118 (46.6 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
++L + +L+ G+ A ++ +TG A +QI A +AM + T +E L M+
Sbjct: 29 QILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLS 88
Query: 66 SGETL--SWRPEDIVVDKHSTGGVG-DKVSIPLVPALAACGLKVPMVS--GRGLDFSGGT 120
L P+D VD TGG G + V++ + A+ VP+V R G
Sbjct: 89 HAHPLPADTVPDD-AVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGG 147
Query: 121 LDKLESIPGYQVNCSTADLKAK-LSEVG---CF 149
D LE++ G +++ DL A+ L+EVG CF
Sbjct: 148 ADTLEAL-GVRIDLGP-DLVARSLAEVGIGFCF 178
>TIGR_CMR|CHY_1585 [details] [associations]
symbol:CHY_1585 "anthranilate phosphoribosyltransferase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000162 "tryptophan biosynthetic process" evidence=ISS]
[GO:0004048 "anthranilate phosphoribosyltransferase activity"
evidence=ISS] InterPro:IPR000312 InterPro:IPR005940 Pfam:PF00591
UniPathway:UPA00035 HAMAP:MF_00211 Pfam:PF02885 EMBL:CP000141
GenomeReviews:CP000141_GR KO:K00766 GO:GO:0000162 eggNOG:COG0547
HOGENOM:HOG000230451 OMA:AMKHAIG GO:GO:0004048 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418
TIGRFAMs:TIGR01245 RefSeq:YP_360414.1 ProteinModelPortal:Q3ABS0
STRING:Q3ABS0 GeneID:3727673 KEGG:chy:CHY_1585 PATRIC:21276295
BioCyc:CHYD246194:GJCN-1584-MONOMER Uniprot:Q3ABS0
Length = 340
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 37/153 (24%), Positives = 67/153 (43%)
Query: 6 ELLRKKRSGNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVD 65
E+L + G L+ E +N + G ++Q+ A L+A+ + G T EE A ++ +
Sbjct: 4 EVLERLMRGENLNFSEALATMNELMEGKYTEAQVAAFLVALKMKGETEEEISAFALALRE 63
Query: 66 SGETLSWRPEDIVVDKHSTGGVGDKV-SIPLVPALAACGLKVPMVS--GRGLDFSGGTLD 122
+ + E +V D TGG G + +I A G +P+ R + G+ D
Sbjct: 64 KARRVITQTEGLV-DTCGTGGDGRQTFNISTAAAFVVAGAGIPVAKHGNRSVSSRSGSAD 122
Query: 123 KLESIPGYQVNCSTADLKAKLSEVGC-FIVGAN 154
LE++ G ++ + E+G F+ N
Sbjct: 123 VLEAL-GVNIDLDAKGTARCVDEIGIGFLFAPN 154
>TIGR_CMR|CPS_3524 [details] [associations]
symbol:CPS_3524 "anthranilate phosphoribosyltransferase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000162
"tryptophan biosynthetic process" evidence=ISS] [GO:0004048
"anthranilate phosphoribosyltransferase activity" evidence=ISS]
InterPro:IPR000312 InterPro:IPR005940 Pfam:PF00591
UniPathway:UPA00035 HAMAP:MF_00211 Pfam:PF02885 EMBL:CP000083
GenomeReviews:CP000083_GR KO:K00766 GO:GO:0000162 eggNOG:COG0547
HOGENOM:HOG000230451 OMA:AMKHAIG GO:GO:0004048 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418
TIGRFAMs:TIGR01245 RefSeq:YP_270198.1 ProteinModelPortal:Q47YC2
STRING:Q47YC2 GeneID:3522323 KEGG:cps:CPS_3524 PATRIC:21469985
BioCyc:CPSY167879:GI48-3552-MONOMER Uniprot:Q47YC2
Length = 365
Score = 109 (43.4 bits), Expect = 0.00099, P = 0.00099
Identities = 39/142 (27%), Positives = 65/142 (45%)
Query: 14 GNELSPGEIAKFVNLTVTGTAEDSQIGAMLMAMFINGLTNEETIALTKSMVDSGETLSWR 73
G +L+ + F + G + + + ++L A+ I G T EE ++ + R
Sbjct: 26 GLDLNQRQSHDFFQQVLQGNIDPALMASVLTALKIKGETPEEIAGAAIAIRAAATPFPER 85
Query: 74 -PEDIVVDKHSTGGVG-DKVSIPLVPAL--AACGLKVPMVSGRGLDFSGGTLDKLESIPG 129
EDIV D TGG G + ++I A+ AACGLK+ R + G+ D LE+ G
Sbjct: 86 NKEDIVADCVGTGGDGANTINISTTAAVLAAACGLKMAKHGNRSVSSMSGSADLLEAF-G 144
Query: 130 YQVNCSTADLKAKLSEVG-CFI 150
++ S L++ CF+
Sbjct: 145 VNLSMSPETANHCLAQTNLCFL 166
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 221 221 0.00095 112 3 11 23 0.43 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 21
No. of states in DFA: 585 (62 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 18.26u 0.08s 18.34t Elapsed: 00:00:14
Total cpu time: 18.26u 0.08s 18.34t Elapsed: 00:00:15
Start: Thu Aug 15 11:24:38 2013 End: Thu Aug 15 11:24:53 2013