Query psy13308
Match_columns 166
No_of_seqs 187 out of 1080
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 16:09:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13308.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13308hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd03211 GST_C_Metaxin2 GST_C f 100.0 1.1E-32 2.3E-37 201.6 13.8 124 1-124 3-126 (126)
2 cd03212 GST_C_Metaxin1_3 GST_C 100.0 9.9E-31 2.2E-35 193.8 12.1 128 1-128 4-137 (137)
3 KOG3027|consensus 99.9 1.5E-27 3.3E-32 184.5 10.5 131 1-131 123-253 (257)
4 KOG3028|consensus 99.9 1.4E-23 3E-28 171.1 10.7 131 1-131 108-239 (313)
5 KOG4244|consensus 99.8 1E-20 2.2E-25 151.4 9.3 128 1-132 148-279 (281)
6 PF11801 Tom37_C: Tom37 C-term 99.8 3.1E-19 6.7E-24 136.5 7.7 109 2-110 16-167 (168)
7 cd03193 GST_C_Metaxin GST_C fa 99.4 1.5E-12 3.2E-17 88.5 7.6 70 55-124 19-88 (88)
8 PF13410 GST_C_2: Glutathione 99.3 1.9E-11 4.1E-16 79.2 7.0 65 54-122 5-69 (69)
9 PF14497 GST_C_3: Glutathione 99.2 3.2E-11 7E-16 83.7 6.6 67 50-125 30-99 (99)
10 PF00043 GST_C: Glutathione S- 99.1 7E-10 1.5E-14 75.6 7.3 68 54-126 27-94 (95)
11 cd03202 GST_C_etherase_LigE GS 99.0 1.6E-09 3.4E-14 78.6 8.2 68 53-125 56-123 (124)
12 cd03180 GST_C_2 GST_C family, 99.0 8.3E-10 1.8E-14 76.9 6.4 66 54-126 42-107 (110)
13 cd03206 GST_C_7 GST_C family, 99.0 1E-09 2.2E-14 76.0 6.5 67 53-126 31-97 (100)
14 cd03187 GST_C_Phi GST_C family 99.0 2.2E-09 4.7E-14 75.8 7.8 67 55-126 45-111 (118)
15 cd03189 GST_C_GTT1_like GST_C 99.0 1.1E-09 2.4E-14 77.7 6.2 65 55-126 54-118 (119)
16 cd03186 GST_C_SspA GST_N famil 99.0 1.9E-09 4.2E-14 75.3 6.3 67 54-126 34-100 (107)
17 cd03188 GST_C_Beta GST_C famil 99.0 2E-09 4.3E-14 75.4 6.3 66 54-126 42-107 (114)
18 cd03196 GST_C_5 GST_C family, 98.9 2.6E-09 5.7E-14 76.3 6.6 71 52-126 38-108 (115)
19 cd03177 GST_C_Delta_Epsilon GS 98.9 4.9E-09 1.1E-13 74.6 7.8 68 52-126 35-103 (118)
20 cd03209 GST_C_Mu GST_C family, 98.9 3.5E-09 7.6E-14 75.9 7.0 67 54-126 34-100 (121)
21 cd00299 GST_C_family Glutathio 98.9 4.3E-09 9.4E-14 71.4 6.3 67 53-123 34-100 (100)
22 cd03182 GST_C_GTT2_like GST_C 98.9 5.8E-09 1.3E-13 73.7 6.3 67 54-126 48-114 (117)
23 cd03190 GST_C_ECM4_like GST_C 98.9 6.2E-09 1.3E-13 77.0 6.4 73 54-126 36-109 (142)
24 cd03178 GST_C_Ure2p_like GST_C 98.9 5.5E-09 1.2E-13 73.4 5.8 67 54-126 39-105 (113)
25 cd03207 GST_C_8 GST_C family, 98.8 1.1E-08 2.4E-13 70.9 6.6 65 54-126 29-93 (103)
26 cd03181 GST_C_EFB1gamma GST_C 98.8 1.7E-08 3.6E-13 71.9 7.5 69 54-126 39-107 (123)
27 PLN02473 glutathione S-transfe 98.8 1.6E-08 3.5E-13 78.9 8.0 68 55-126 135-202 (214)
28 cd03210 GST_C_Pi GST_C family, 98.8 1.9E-08 4.2E-13 72.7 7.6 67 54-126 34-103 (126)
29 cd03201 GST_C_DHAR GST_C famil 98.8 1.3E-08 2.9E-13 73.5 6.7 71 53-126 28-101 (121)
30 PRK10387 glutaredoxin 2; Provi 98.8 1E-08 2.2E-13 79.6 6.5 65 54-127 141-205 (210)
31 cd03204 GST_C_GDAP1 GST_C fami 98.8 1.7E-08 3.7E-13 72.2 7.0 70 54-126 28-108 (111)
32 cd03185 GST_C_Tau GST_C family 98.8 2.1E-08 4.6E-13 71.7 7.3 72 54-126 34-106 (126)
33 cd03183 GST_C_Theta GST_C fami 98.8 1.7E-08 3.7E-13 72.5 6.7 67 54-126 44-111 (126)
34 cd03179 GST_C_1 GST_C family, 98.8 2.1E-08 4.6E-13 69.3 6.8 64 54-124 42-105 (105)
35 cd03197 GST_C_mPGES2 GST_C fam 98.8 3.2E-08 7E-13 74.1 8.0 74 46-127 74-147 (149)
36 PRK13972 GSH-dependent disulfi 98.8 1.7E-08 3.8E-13 79.0 6.7 64 56-126 133-196 (215)
37 cd03184 GST_C_Omega GST_C fami 98.8 1.7E-08 3.7E-13 72.6 6.1 73 52-125 29-103 (124)
38 cd03200 GST_C_JTV1 GST_C famil 98.8 2.9E-08 6.3E-13 69.0 6.6 58 58-125 38-95 (96)
39 cd03198 GST_C_CLIC GST_C famil 98.8 1.6E-08 3.5E-13 74.7 5.6 73 53-126 27-115 (134)
40 cd03192 GST_C_Sigma_like GST_C 98.7 2.5E-08 5.5E-13 69.1 6.2 64 55-123 39-104 (104)
41 cd03208 GST_C_Alpha GST_C fami 98.7 3E-08 6.5E-13 73.1 6.5 62 59-126 43-106 (137)
42 cd03191 GST_C_Zeta GST_C famil 98.7 4.8E-08 1E-12 69.6 7.3 63 57-126 46-110 (121)
43 PRK09481 sspA stringent starva 98.7 4.4E-08 9.5E-13 76.7 6.2 68 54-126 126-193 (211)
44 PLN02395 glutathione S-transfe 98.7 8.1E-08 1.8E-12 74.9 7.6 68 55-126 134-201 (215)
45 PRK10542 glutathionine S-trans 98.6 5.1E-08 1.1E-12 75.2 5.6 64 56-126 125-188 (201)
46 PRK11752 putative S-transferas 98.6 1.3E-07 2.8E-12 76.9 7.0 72 55-126 178-249 (264)
47 PTZ00057 glutathione s-transfe 98.6 1.4E-07 3E-12 73.6 6.8 65 56-126 124-190 (205)
48 COG0625 Gst Glutathione S-tran 98.6 1.2E-07 2.5E-12 74.0 6.2 67 54-127 130-196 (211)
49 TIGR02182 GRXB Glutaredoxin, G 98.6 1.6E-07 3.4E-12 73.7 6.8 64 54-127 140-204 (209)
50 KOG0406|consensus 98.6 4.1E-08 8.9E-13 78.3 3.0 99 25-126 83-202 (231)
51 TIGR01262 maiA maleylacetoacet 98.6 1.3E-07 2.8E-12 73.4 5.7 64 56-126 130-195 (210)
52 cd03195 GST_C_4 GST_C family, 98.5 7.4E-07 1.6E-11 63.4 7.5 64 53-126 40-104 (114)
53 cd03203 GST_C_Lambda GST_C fam 98.5 3E-07 6.4E-12 66.1 5.5 65 59-126 34-102 (120)
54 PLN02378 glutathione S-transfe 98.4 7E-07 1.5E-11 70.1 7.2 70 54-126 117-190 (213)
55 cd03205 GST_C_6 GST_C family, 98.4 1.1E-06 2.4E-11 60.5 6.6 63 54-123 36-98 (98)
56 cd03194 GST_C_3 GST_C family, 98.4 1.8E-06 4E-11 61.5 7.8 63 54-126 40-105 (114)
57 TIGR00862 O-ClC intracellular 98.3 8.7E-07 1.9E-11 71.3 5.5 72 54-126 122-211 (236)
58 PRK10357 putative glutathione 98.3 2E-06 4.3E-11 66.5 7.2 67 55-126 125-191 (202)
59 PLN02817 glutathione dehydroge 98.3 1.4E-06 3.1E-11 71.1 6.6 68 56-126 172-242 (265)
60 PRK15113 glutathione S-transfe 98.1 1.3E-05 2.8E-10 62.8 7.2 63 54-126 136-199 (214)
61 PLN02907 glutamate-tRNA ligase 98.0 9.2E-06 2E-10 74.7 5.8 63 59-127 94-158 (722)
62 KOG4420|consensus 98.0 2.2E-05 4.7E-10 63.7 6.8 70 54-127 204-279 (325)
63 KOG0867|consensus 97.9 3.9E-05 8.5E-10 61.1 7.2 73 54-133 132-205 (226)
64 COG0435 ECM4 Predicted glutath 97.6 3.8E-05 8.3E-10 62.8 3.0 78 54-135 204-284 (324)
65 KOG1695|consensus 97.3 0.00054 1.2E-08 54.1 5.8 62 59-125 127-190 (206)
66 KOG3029|consensus 97.1 0.0024 5.2E-08 52.6 7.3 67 56-127 289-356 (370)
67 KOG2903|consensus 97.0 0.0003 6.5E-09 57.2 1.5 73 54-127 202-279 (319)
68 PF14834 GST_C_4: Glutathione 96.2 0.053 1.1E-06 39.0 8.5 45 54-99 42-87 (117)
69 PF04399 Glutaredoxin2_C: Glut 96.2 0.037 8E-07 40.7 7.8 65 54-127 58-122 (132)
70 KOG0868|consensus 95.8 0.024 5.1E-07 44.0 5.2 63 56-125 133-197 (217)
71 cd03199 GST_C_GRX2 GST_C famil 95.0 0.15 3.3E-06 37.3 7.1 64 54-126 59-122 (128)
72 KOG1422|consensus 94.5 0.099 2.2E-06 41.4 5.4 67 56-125 124-195 (221)
73 KOG1147|consensus 66.1 6 0.00013 35.9 3.0 37 59-95 92-128 (712)
74 COG2999 GrxB Glutaredoxin 2 [P 64.6 22 0.00048 27.8 5.5 63 54-126 141-204 (215)
75 KOG1668|consensus 45.8 22 0.00048 28.6 2.9 34 61-94 10-43 (231)
76 cd08797 Death_NFkB1_p105 Death 43.1 7.8 0.00017 25.8 -0.1 28 135-165 31-58 (76)
77 cd08798 Death_NFkB2_p100 Death 34.1 13 0.00029 24.7 -0.0 27 136-165 32-58 (76)
78 PF05003 DUF668: Protein of un 29.5 1.3E+02 0.0029 20.5 4.3 40 29-68 38-81 (89)
79 PF15565 Imm16: Immunity prote 26.9 2.3E+02 0.005 19.9 7.2 80 52-135 11-100 (106)
80 PHA00666 putative protease 26.4 1.7E+02 0.0037 23.6 5.0 47 38-91 181-230 (233)
81 KOG4107|consensus 24.5 2.6E+02 0.0057 19.8 5.7 63 57-123 46-118 (125)
82 COG3394 Uncharacterized protei 22.3 1.8E+02 0.0038 23.9 4.4 34 47-87 93-126 (257)
83 PLN00108 unknown protein; Prov 21.7 66 0.0014 26.4 1.9 58 58-130 108-177 (257)
84 cd08801 Death_UNC5D Death doma 20.2 48 0.001 23.0 0.7 29 137-165 38-66 (98)
85 PF08369 PCP_red: Proto-chloro 20.1 2E+02 0.0044 16.8 3.7 34 20-57 9-42 (45)
No 1
>cd03211 GST_C_Metaxin2 GST_C family, Metaxin subfamily, Metaxin 2; a metaxin 1 binding protein identified through a yeast two-hybrid system using metaxin 1 as the bait. Metaxin 2 shares sequence similarity with metaxin 1 but does not contain a C-terminal mitochondrial outer membrane signal-anchor domain. It associates with mitochondrial membranes through its interaction with metaxin 1, which is a component of the mitochondrial preprotein import complex of the outer membrane. The biological function of metaxin 2 is unknown. It is likely that it also plays a role in protein translocation into the mitochondria. However, this has not been experimentally validated. In a recent proteomics study, it has been shown that metaxin 2 is overexpressed in response to lipopolysaccharide-induced liver injury.
Probab=100.00 E-value=1.1e-32 Score=201.56 Aligned_cols=124 Identities=52% Similarity=1.030 Sum_probs=117.4
Q ss_pred CeeeecCCCChHHhhHHHhhccCChhhHHHhHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhhhccCCccCCC
Q psy13308 1 NYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKD 80 (166)
Q Consensus 1 ly~~W~d~~n~~~~t~~~~~~~~P~pl~~~l~~~~r~~~~~~l~~~G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd 80 (166)
||.||+|++||..++++.|...+|+|+|.++++.+|+++++++++||+|+++.+++.+.++++|++|+++||+++||+||
T Consensus 3 l~~~w~d~~~~~~~~~~~~~~~~p~~l~~~~~~~~r~~~~~~l~~~G~gr~~~ee~~~~~~~~l~aLs~~Lg~~~~l~Gd 82 (126)
T cd03211 3 LYISWCDEETYDEVTKPRYGSPYPWPLNHILPYQKQREARRKLKAIGWDDKTLDQVIEEVDQCCQALSQRLGTQPYFFGD 82 (126)
T ss_pred eeehccCcchHHHHhHHHHccCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 69999999999999999999899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHH
Q psy13308 81 KPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 124 (166)
Q Consensus 81 ~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~ 124 (166)
+||++||++|+++..+...+.+++++...+.+||||++|++||.
T Consensus 83 ~pT~~Da~vf~~la~~~~~~~~~~~l~~~~~~~pnL~~y~~Ri~ 126 (126)
T cd03211 83 QPTELDALVFGHLFTILTTQLPNDELAEKVKKYSNLLAFCRRIE 126 (126)
T ss_pred CCcHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHhcC
Confidence 99999999999999998765666677777899999999999983
No 2
>cd03212 GST_C_Metaxin1_3 GST_C family, Metaxin subfamily, Metaxin 1-like proteins; composed of metaxins 1 and 3, and similar proteins. Mammalian metaxin (or metaxin 1) is a component of the preprotein import complex of the mitochondrial outer membrane. Metaxin extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. Like the murine gene, the human metaxin gene is located downstream to the glucocerebrosidase (GBA) pseudogene and is convergently transcribed. Inherited deficiency of GBA results in Gaucher disease, which presents many diverse clinical phenotypes. Alterations in the metaxin gene, in addition to GBA mutations, may be associated with Gaucher disease. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals.
Probab=99.97 E-value=9.9e-31 Score=193.78 Aligned_cols=128 Identities=38% Similarity=0.696 Sum_probs=119.0
Q ss_pred CeeeecCCCChHHhhHHHhhccCChhhHHHhHHHHHHHHHHH------hhhcccCCCCHHHHHHHHHHHHHHHHhhhccC
Q psy13308 1 NYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHR------LKTLKWLEKSLDQVYKDVDKCCQSLSERLEKN 74 (166)
Q Consensus 1 ly~~W~d~~n~~~~t~~~~~~~~P~pl~~~l~~~~r~~~~~~------l~~~G~g~~~~~~~~~~~~~~L~~Le~~L~~~ 74 (166)
+|.+|+|++||.++|+++|++.+|||+|.++|+.+|++++++ +..+|+++++.+++.+++.+++++|++.|+++
T Consensus 4 l~~~w~d~~n~~~~~~~~y~~~~p~pl~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~L~~~ 83 (137)
T cd03212 4 LHTFWVDPKNYDTVTRPWYASHIPFPLNFYLPGKMQRRALDRLQLTRGFSPLDSETEVEAEIYRDAKECLNLLSQRLGES 83 (137)
T ss_pred HHhhHcCcchHHHHHHHHHccCCCCcHHHHhhHHHHHHHHHHHHHhcCCChhhhhhhhHHHHHHHHHHHHHHHHHHHCCC
Confidence 589999999999999999999999999999999999999999 44566778889999999999999999999999
Q ss_pred CccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhhC
Q psy13308 75 NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNYF 128 (166)
Q Consensus 75 ~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~~ 128 (166)
+||+|++||.+||++|++++.+...+.+++.+...+.++|||++|++||.++||
T Consensus 84 ~~~~Gd~~t~~D~~~~~~l~~~~~~~~~~~~l~~~~~~~pnL~~~~~ri~~~~f 137 (137)
T cd03212 84 QFFFGDTPTSLDALVFGYLAPLLKAPLPNNKLQNHLKQCPNLCRFCDRILSLYF 137 (137)
T ss_pred CcCCCCCCcHHHHHHHHHHHHHHhccCCChHHHHHHHHCcHHHHHHHHHHHhcC
Confidence 999999999999999999999987677677788888999999999999999997
No 3
>KOG3027|consensus
Probab=99.95 E-value=1.5e-27 Score=184.49 Aligned_cols=131 Identities=49% Similarity=0.933 Sum_probs=126.9
Q ss_pred CeeeecCCCChHHhhHHHhhccCChhhHHHhHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhhhccCCccCCC
Q psy13308 1 NYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKD 80 (166)
Q Consensus 1 ly~~W~d~~n~~~~t~~~~~~~~P~pl~~~l~~~~r~~~~~~l~~~G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd 80 (166)
+|..|+|+++|.++|+..|++.+|||++.+++...|+.+++.++..+++..+.+++.+++.+|+++|+++||.++||+|+
T Consensus 123 l~~s~~de~ty~~vT~~R~gs~ypWPLs~i~~f~Krr~~~r~lk~~~W~~~~~DqVie~vdkc~~aLsa~L~~q~yf~g~ 202 (257)
T KOG3027|consen 123 LYVSWNDEETYDEVTALRYGSVYPWPLSHILPFVKRRKALRELKVYDWDDKTMDQVIEQVDKCCRALSAQLGSQPYFTGD 202 (257)
T ss_pred HHHHhccHHHHHHHhhhccCCCCCCcHHHHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhhCCCC
Q psy13308 81 KPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNYFKKD 131 (166)
Q Consensus 81 ~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~~p~~ 131 (166)
+||.+|+++||++..++.+.+|+..+...+..|+||.+||+||.+.||.+.
T Consensus 203 ~P~elDAlvFGHlytilTt~Lpn~ela~~lkkys~LlefcrrIeq~yF~~r 253 (257)
T KOG3027|consen 203 QPTELDALVFGHLYTILTTRLPNMELANILKKYSNLLEFCRRIEQQYFKQR 253 (257)
T ss_pred CccHHHHHHHhhhHHhhhhcCCcHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999753
No 4
>KOG3028|consensus
Probab=99.90 E-value=1.4e-23 Score=171.12 Aligned_cols=131 Identities=38% Similarity=0.567 Sum_probs=121.4
Q ss_pred CeeeecCCCChHHhhHHHhhccCChhhHHHhHHHHHHHHHHHhhhc-ccCCCCHHHHHHHHHHHHHHHHhhhccCCccCC
Q psy13308 1 NYITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTL-KWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFK 79 (166)
Q Consensus 1 ly~~W~d~~n~~~~t~~~~~~~~P~pl~~~l~~~~r~~~~~~l~~~-G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~G 79 (166)
+|..|+|++||..+|+++|...+|||++++.|.++++++++|+..+ |...+.+++++.++.+++.+|+++||++.||||
T Consensus 108 ~~t~~v~~~Ny~e~Tkk~yak~l~fP~n~~~p~~l~~qAk~rl~l~~g~~~~~e~~i~~~Aska~~~LS~~Lgs~kffFg 187 (313)
T KOG3028|consen 108 LYTFWVDTENYNEVTKKWYAKALPFPLNYILPGKLQRQAKERLQLTLGELTEREDQIYKDASKALNLLSTLLGSKKFFFG 187 (313)
T ss_pred HHHHHhcccchhhHhHHHHHhcCCCchhhcchhhhHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcCceEeeC
Confidence 4778999999999999999999999999999999999999998753 444445789999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhhCCCC
Q psy13308 80 DKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNYFKKD 131 (166)
Q Consensus 80 d~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~~p~~ 131 (166)
|+||..||.+|+|++.++..++|+..++..+..|+||.+|++|++..||+..
T Consensus 188 d~psslDa~lfs~la~~~~~~Lp~~~Lq~~l~~~~NL~~~~~~i~s~~f~~~ 239 (313)
T KOG3028|consen 188 DKPSSLDALLFSYLAILLQVALPNDSLQVHLLAHKNLVRYVERIRSLYFRAS 239 (313)
T ss_pred CCCchHHHHHHHHHHHHHhccCCchhHHHHHHhcchHHHHHHHHHHHHhccc
Confidence 9999999999999999899999998899888889999999999999999977
No 5
>KOG4244|consensus
Probab=99.84 E-value=1e-20 Score=151.38 Aligned_cols=128 Identities=22% Similarity=0.330 Sum_probs=103.0
Q ss_pred CeeeecCCCChHHhhHHHhhcc--C-ChhhHHHhHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhhhccCCcc
Q psy13308 1 NYITWCDPTTYREVTKVRHGAV--A-PWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFF 77 (166)
Q Consensus 1 ly~~W~d~~n~~~~t~~~~~~~--~-P~pl~~~l~~~~r~~~~~~l~~~G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl 77 (166)
+|++|.|++-+. ..++..... + |..++++....+.+++.+|+.++ +|+++.+|+.+.++++|++++..||+++||
T Consensus 148 ~y~k~~~~~~~~-~~~~~~~l~~~l~~~l~~~~~~~~f~~kv~~r~~g~-IG~f~~~Ei~ell~rDlr~i~~~Lg~Kkfl 225 (281)
T KOG4244|consen 148 LYYKGADDAWLN-TDRKLIGLPGFLFPLLLPLFWKAIFGKKVYKRSTGA-IGDFESAEIDELLHRDLRAISDYLGDKKFL 225 (281)
T ss_pred HHhhhcchHHHH-HHHhccCccccchHHHHHHHHHHHHHHHHHHHhhcc-ccCcCHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 477888876444 455433211 1 23333333555666788888888 999999999999999999999999999999
Q ss_pred CCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHh-hChhHHHHHHHHHHhhCCCCc
Q psy13308 78 FKDKPTELDALLFGHIYAVLTTPLPNNRFASTIR-AYPNLVEHCTRIEQNYFKKDS 132 (166)
Q Consensus 78 ~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~-~~P~L~~y~~Ri~~r~~p~~~ 132 (166)
|||++|.+||++||+|+.+.+ |+ .+++...++ ++|||.+||+||++++||++.
T Consensus 226 fGdkit~~DatvFgqLa~v~Y-P~-~~~i~d~le~d~p~l~eYceRIr~~~yP~d~ 279 (281)
T KOG4244|consen 226 FGDKITPADATVFGQLAQVYY-PF-RSHISDLLEGDFPNLLEYCERIRKEIYPNDF 279 (281)
T ss_pred cCCCCCcceeeehhhhhheec-cC-CCcHHHHHhhhchHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999998 65 346788885 999999999999999999765
No 6
>PF11801 Tom37_C: Tom37 C-terminal domain; InterPro: IPR019564 Tom37 is one of the outer membrane proteins that make up the TOM complex for guiding cytosolic mitochondrial beta-barrel proteins from the cytosol across the outer mitochondrial membrane into the intramembrane space. In conjunction with Tom70, it guides peptides without an mitochondrial targeting sequence (MTS) into Tom40, the protein that forms the passage through the outer membrane []. It has homology with metaxin, also part of the outer mitochondrial membrane beta-barrel protein transport complex []. This entry represents outer mitochondrial membrane transport complex proteins Tom37 and metaxin.; GO: 0006626 protein targeting to mitochondrion, 0005741 mitochondrial outer membrane
Probab=99.79 E-value=3.1e-19 Score=136.46 Aligned_cols=109 Identities=28% Similarity=0.450 Sum_probs=91.9
Q ss_pred eeeecCCCChHHhhHHHhhccCChhhHHHhHHHHHHHHHHHhhhcccCCCC-----------------------------
Q psy13308 2 YITWCDPTTYREVTKVRHGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKS----------------------------- 52 (166)
Q Consensus 2 y~~W~d~~n~~~~t~~~~~~~~P~pl~~~l~~~~r~~~~~~l~~~G~g~~~----------------------------- 52 (166)
|+.|+|++||.++||++|+..+|||+++++|.++|+++++|+...|++...
T Consensus 16 y~lyv~~~Ny~~~Tr~~~~~~lpfP~~y~~P~~~r~~a~~r~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~~~~~ 95 (168)
T PF11801_consen 16 YSLYVDSKNYEEVTRPAFSKLLPFPLNYNLPPRLRNQAKERLEHLGLSSLDTDEEEEEEEEDEEAEEAASQIPQSKLHKK 95 (168)
T ss_pred HHHHhCchhHHHHhHHHHHhhCCCchhhcCCHHHHHHHHHHHHHhCCCcccchhhccccccccchhhhcccCCCccchhh
Confidence 789999999999999999999999999999999999999999998882100
Q ss_pred -------HHHH---HHHHHHHHHHHHhhhccC---CccCCCC-CChhHHHHHHHHHHHhcCCCCCchHHHHH
Q psy13308 53 -------LDQV---YKDVDKCCQSLSERLEKN---NFFFKDK-PTELDALLFGHIYAVLTTPLPNNRFASTI 110 (166)
Q Consensus 53 -------~~~~---~~~~~~~L~~Le~~L~~~---~yl~Gd~-pT~aD~~vf~~l~~~~~~~~~~~~l~~~l 110 (166)
..+. .....+++..|++.|++. .|++|+. ||++||++|||++.+...++|++.++..|
T Consensus 96 ~~~~k~~~k~~lr~~~~a~~~l~~L~~~L~~~~~~~~~f~~~~psslD~L~~ayL~l~l~p~LP~~~l~~~L 167 (168)
T PF11801_consen 96 QETAKSKQKEQLRLSKLAMECLSLLEELLGEWEEARYFFGDSKPSSLDCLAFAYLALLLVPELPDPFLRDHL 167 (168)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCCHHHHHHHHHHHHHhcccCCcHHHHHHh
Confidence 0111 223678999999999999 9999996 99999999999999998778776555443
No 7
>cd03193 GST_C_Metaxin GST_C family, Metaxin subfamily; composed of metaxins and related proteins. Metaxin 1 is a component of a preprotein import complex of the mitochondrial outer membrane. It extends to the cytosol and is anchored to the mitochondrial membrane through its C-terminal domain. In mice, metaxin is required for embryonic development. In humans, alterations in the metaxin gene may be associated with Gaucher disease. Metaxin 2 binds to metaxin 1 and may also play a role in protein translocation into the mitochondria. Genome sequencing shows that a third metaxin gene also exists in zebrafish, Xenopus, chicken, and mammals. Sequence analysis suggests that all three metaxins share a common ancestry and that they possess similarity to GSTs. Also included in the subfamily are uncharacterized proteins with similarity to metaxins, including a novel GST from Rhodococcus with toluene o-monooxygenase and glutamylcysteine synthetase activities. Other members are the cadmium-inducible
Probab=99.39 E-value=1.5e-12 Score=88.50 Aligned_cols=70 Identities=46% Similarity=0.836 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHH
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 124 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~ 124 (166)
+..+++.+.++.||+.|++++|++|++||++||++++++..+.....+.......++++|+|.+|++||+
T Consensus 19 ~~~~~~~~~l~~le~~L~~~~yl~Gd~~t~aDi~l~~~l~~~~~~~~~~~~~~~~~~~~p~l~~~~~r~~ 88 (88)
T cd03193 19 EIYSLAKKDLKALSDLLGDKKFFFGDKPTSLDATVFGHLASILYAPLPNSALQLILKEYPNLVEYCERIR 88 (88)
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCCCCHHHHHHHHHHHHHHhcCCCChHHHHHHHhCcHHHHHHHHhC
Confidence 6678899999999999999999999999999999999998776432222223345689999999999974
No 8
>PF13410 GST_C_2: Glutathione S-transferase, C-terminal domain; PDB: 4DEJ_H 3IC8_A 2JL4_A 2V6K_B 3CBU_B 1JLW_B 3F6D_B 3G7I_A 3F63_A 3G7J_B ....
Probab=99.27 E-value=1.9e-11 Score=79.24 Aligned_cols=65 Identities=22% Similarity=0.390 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHH
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTR 122 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~R 122 (166)
+++.+.+.+.|+.||++|++++|++|++||++|+.+++++..+...... ......+|+|.+|++|
T Consensus 5 ~~~~~~~~~~l~~le~~L~~~~fl~G~~~s~aD~~l~~~l~~~~~~~~~----~~~~~~~p~l~~w~~r 69 (69)
T PF13410_consen 5 ERARAQLEAALDALEDHLADGPFLFGDRPSLADIALAPFLWRLRFVGPD----FDLLEAYPNLRAWYER 69 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSBTTBSS--HHHHHHHHHHHHHHHCTHT----CCHHTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHHHHHHhCcC----cCccccCHHHHHHHhC
Confidence 5678899999999999999999999999999999999999988776321 1234799999999987
No 9
>PF14497 GST_C_3: Glutathione S-transferase, C-terminal domain; PDB: 3AY8_A 2UZ8_B 1V2A_C 2HNL_A 2YV9_B 3H1N_A 3FR6_A 1Q4J_B 1PA3_B 1OKT_B ....
Probab=99.22 E-value=3.2e-11 Score=83.68 Aligned_cols=67 Identities=33% Similarity=0.501 Sum_probs=55.0
Q ss_pred CCCHHHHHHHHHHHHHHHHhhhccCC--ccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHH-hhChhHHHHHHHHHH
Q psy13308 50 EKSLDQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTI-RAYPNLVEHCTRIEQ 125 (166)
Q Consensus 50 ~~~~~~~~~~~~~~L~~Le~~L~~~~--yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l-~~~P~L~~y~~Ri~~ 125 (166)
....+...+++.+.|..+++.|+++. ||+|++||.||+.+|+++..+.+. .+ +++|||.+|++||++
T Consensus 30 ~~~~~~~~~~~~~~l~~l~~~L~~~~~~~l~G~~~T~AD~~v~~~l~~~~~~---------~~~~~~p~L~~w~~ri~~ 99 (99)
T PF14497_consen 30 EASGDFSREELPKALKILEKHLAERGGDFLVGDKPTLADIAVFGFLASLRWA---------DFPKDYPNLVRWYERIEE 99 (99)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTSSSSSSSSS--HHHHHHHHHHHHHHCC---------HHTTTCHHHHHHHHHHHT
T ss_pred hhhHHhhHHHHHHHHHHHHHHHHcCCCeeecCCCCCHHHHHHHHHHHHHhhc---------ccccccHHHHHHHHhhcC
Confidence 34456678888999999999999888 999999999999999999877643 12 699999999999975
No 10
>PF00043 GST_C: Glutathione S-transferase, C-terminal domain; InterPro: IPR004046 In eukaryotes, glutathione S-transferases (GSTs) participate in the detoxification of reactive electrophillic compounds by catalysing their conjugation to glutathione. The GST domain is also found in S-crystallins from squid, and proteins with no known GST activity, such as eukaryotic elongation factors 1-gamma and the HSP26 family of stress-related proteins, which include auxin-regulated proteins in plants and stringent starvation proteins in Escherichia coli. The major lens polypeptide of cephalopods is also a GST [, , , ]. Bacterial GSTs of known function often have a specific, growth-supporting role in biodegradative metabolism: epoxide ring opening and tetrachlorohydroquinone reductive dehalogenation are two examples of the reactions catalysed by these bacterial GSTs. Some regulatory proteins, like the stringent starvation proteins, also belong to the GST family [, ]. GST seems to be absent from Archaea in which gamma-glutamylcysteine substitute to glutathione as major thiol. Glutathione S-transferases form homodimers, but in eukaryotes can also form heterodimers of the A1 and A2 or YC1 and YC2 subunits. The homodimeric enzymes display a conserved structural fold. Each monomer is composed of a distinct N-terminal sub-domain, which adopts the thioredoxin fold, and a C-terminal all-helical sub-domain. This entry is the C-terminal domain.; PDB: 3UAP_A 3UAR_A 3QAV_A 3QAW_A 1Y6E_A 1U88_B 4AI6_B 1UA5_A 4AKH_A 3QMZ_S ....
Probab=99.06 E-value=7e-10 Score=75.63 Aligned_cols=68 Identities=19% Similarity=0.246 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++...++.+.|+.+++.|.+++|+.|+++|.||+++++.+..+...... .. .+++|+|.+|.+||.++
T Consensus 27 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~~--~~---~~~~P~l~~w~~~~~~~ 94 (95)
T PF00043_consen 27 EEARAKVPRYLEVLEKRLKGGPYLVGDKLTIADIALFPMLDWLERLGPD--FL---FEKFPKLKKWYERMFAR 94 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSSSSSBSS-CHHHHHHHHHHHHHHHHTTT--TT---HTTSHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeeccCCchhHHHHHHHHHHHHHhCCC--cc---cccCHHHHHHHHHHHcC
Confidence 4567788899999999999999999999999999999999877665321 11 47999999999999875
No 11
>cd03202 GST_C_etherase_LigE GST_C family, Beta etherase LigE subfamily; composed of proteins similar to Sphingomonas paucimobilis beta etherase, LigE, a GST-like protein that catalyzes the cleavage of the beta-aryl ether linkages present in low-moleculer weight lignins using GSH as the hydrogen donor. This reaction is an essential step in the degradation of lignin, a complex phenolic polymer that is the most abundant aromatic material in the biosphere. The beta etherase activity of LigE is enantioselective and it complements the activity of the other GST family beta etherase, LigF. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains.
Probab=99.02 E-value=1.6e-09 Score=78.57 Aligned_cols=68 Identities=12% Similarity=0.135 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 53 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
.++..+.+++.++.|++.|++++|+.|++||+||+++++.+..+.... . ...++++|+|.+|.+||.+
T Consensus 56 ~~~~~~~~~~~l~~l~~~L~~~~fl~Gd~~t~AD~~l~~~l~~~~~~~----~-~~~~~~~p~l~~W~~r~~~ 123 (124)
T cd03202 56 REAALANFRAALEPLRATLKGQPFLGGAAPNYADYIVFGGFQWARIVS----P-FPLLEEDDPVYDWFERCLD 123 (124)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccCCCCCchhHHHHHHHHHHHHHcC----c-ccccccCChHHHHHHHHhc
Confidence 467788899999999999999999999999999999999987665431 1 1134789999999999975
No 12
>cd03180 GST_C_2 GST_C family, unknown subfamily 2; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.02 E-value=8.3e-10 Score=76.92 Aligned_cols=66 Identities=18% Similarity=0.162 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++..+.+.+.|+.||+.|++++|+.|+++|++|+++++.+..+.... ..+.++|+|.+|.+||.++
T Consensus 42 ~~~~~~~~~~l~~lE~~L~~~~~l~g~~~t~aDi~~~~~~~~~~~~~-------~~~~~~p~l~~~~~~~~~~ 107 (110)
T cd03180 42 AASLAAWAKLMAILDAQLAGRPYLAGDRFTLADIPLGCSAYRWFELP-------IERPPLPHLERWYARLRAR 107 (110)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHHHHHHcc-------cccccCchHHHHHHHHHhC
Confidence 34677889999999999999999999999999999888876543321 1247899999999999875
No 13
>cd03206 GST_C_7 GST_C family, unknown subfamily 7; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=99.01 E-value=1e-09 Score=76.01 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 53 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.++...++++.++.+|++|++++|+.|+++|.+|+++++++...... ...++++|+|.+|.+||.++
T Consensus 31 ~~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~-------~~~~~~~p~l~~~~~~~~~~ 97 (100)
T cd03206 31 KETAIARAHRLLRLLEEHLAGRDWLAGDRPTIADVAVYPYVALAPEG-------GVDLEDYPAIRRWLARIEAL 97 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCccCCCCCCHHHHHHHHHHHHHhcc-------CCChhhCcHHHHHHHHHHhC
Confidence 35567889999999999999999999999999999998888532211 11246899999999999875
No 14
>cd03187 GST_C_Phi GST_C family, Class Phi subfamily; composed of plant-specific class Phi GSTs and related fungal and bacterial proteins. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Phi GST subfamily has experience extensive gene duplication. The Arabidopsis and Oryza genomes contain 13 and 16 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Tau GSTs, showing class specificity in substrate preference. Phi enzymes a
Probab=98.99 E-value=2.2e-09 Score=75.82 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.....+.+.++.||+.|++++|++|+++|.+|+++++.+..+.... ....++++|+|.+|.+||.++
T Consensus 45 ~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~-----~~~~~~~~p~l~~~~~~~~~~ 111 (118)
T cd03187 45 ENEEKLKKVLDVYEARLSKSKYLAGDSFTLADLSHLPYLQYLMATP-----FAKLFDSRPHVKAWWEDISAR 111 (118)
T ss_pred HHHHHHHHHHHHHHHHcccCcccCCCCccHHHHHHHHHHHHHHHcc-----chhhhhcCchHHHHHHHHHhC
Confidence 3466788999999999999999999999999999888887654321 122356899999999999875
No 15
>cd03189 GST_C_GTT1_like GST_C family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endopl
Probab=98.99 E-value=1.1e-09 Score=77.74 Aligned_cols=65 Identities=28% Similarity=0.382 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
....++.+.++.||++|++++|++|+++|+||++++..+..+.... . .+..+|+|.+|.+||.++
T Consensus 54 ~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~-----~--~~~~~p~l~~w~~~~~~~ 118 (119)
T cd03189 54 FINPELKKHLDFLEDRLAKKGYFVGDKLTAADIMMSFPLEAALARG-----P--LLEKYPNIAAYLERIEAR 118 (119)
T ss_pred HHhHHHHHHHHHHHHHHccCCCCCCCCCCHHHHHHHHHHHHHHHcC-----c--ccccCchHHHHHHHHhcC
Confidence 3556789999999999999999999999999998887776554321 1 357899999999999875
No 16
>cd03186 GST_C_SspA GST_N family, Stringent starvation protein A (SspA) subfamily; SspA is a RNA polymerase (RNAP)-associated protein required for the lytic development of phage P1 and for stationary phase-induced acid tolerance of E. coli. It is implicated in survival during nutrient starvation. SspA adopts the GST fold with an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, but it does not bind glutathione (GSH) and lacks GST activity. SspA is highly conserved among gram-negative bacteria. Related proteins found in Neisseria (called RegF), Francisella and Vibrio regulate the expression of virulence factors necessary for pathogenesis.
Probab=98.96 E-value=1.9e-09 Score=75.28 Aligned_cols=67 Identities=10% Similarity=0.191 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++..+.+.+.|..||+.|++++|+.|+++|++||++++++..+..... .....+|+|.+|.+||.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~r 100 (107)
T cd03186 34 EKARKELRESLLALAPVFAHKPYFMSEEFSLVDCALAPLLWRLPALGI------ELPKQAKPLKDYMERVFAR 100 (107)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCCcHHHHHHHHHHHHHHHcCC------CCcccchHHHHHHHHHHCC
Confidence 456778899999999999999999999999999988888754432221 1124799999999999875
No 17
>cd03188 GST_C_Beta GST_C family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Unlike mammalian GSTs which detoxify a broad range of compounds, the bacterial class Beta GSTs exhibit limited GSH conjugating activity with a narrow range of substrates. In addition to GSH conjugation, they also bind antibiotics and reduce the antimicrobial activity of beta-lactam drugs. The structure of the Proteus mirabilis enzyme reveals that the cysteine in the active site for
Probab=98.95 E-value=2e-09 Score=75.44 Aligned_cols=66 Identities=18% Similarity=0.246 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+.....+.+.++.||+.|++++|++|+++|+||+++++.+..+...+. .++++|+|.+|++||.++
T Consensus 42 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~t~aDi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 107 (114)
T cd03188 42 AAARERLAARLAYLDAQLAGGPYLLGDRFSVADAYLFVVLRWAPGVGL-------DLSDWPNLAAYLARVAAR 107 (114)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeCCCcchHHHHHHHHHHHHhhcCC-------ChhhChHHHHHHHHHHhC
Confidence 446678899999999999999999999999999998888765533211 146899999999999874
No 18
>cd03196 GST_C_5 GST_C family, unknown subfamily 5; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.94 E-value=2.6e-09 Score=76.32 Aligned_cols=71 Identities=17% Similarity=0.265 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 52 SLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 52 ~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
..+...+++.+.++.||++|++++|++|+++|.||+++++.+..+..... . ...++++|+|.+|.+||.++
T Consensus 38 ~~~~~~~~i~~~l~~le~~L~~~~yl~Gd~~tlADi~l~~~l~~~~~~~~-~---~~~~~~~P~L~~w~~r~~~r 108 (115)
T cd03196 38 SEEEYRQQAEAFLKDLEARLQQHSYLLGDKPSLADWAIFPFVRQFAHVDP-K---WFDQSPYPRLRRWLNGFLAS 108 (115)
T ss_pred cHHHHHHHHHHHHHHHHHHHccCCccCCCCccHHHHHHHHHHHHHHHhhh-c---ccCcccCHHHHHHHHHHHcC
Confidence 35677889999999999999999999999999999999887765432210 0 11247999999999999874
No 19
>cd03177 GST_C_Delta_Epsilon GST_C family, Class Delta and Epsilon subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Delta and Epsilon subfamily is made up primarily of insect GSTs, which play major roles in insecticide resistance by facilitating reductive dehydrochlorination of insecticides or conjugating them with GSH to produce water-soluble metabolites th
Probab=98.93 E-value=4.9e-09 Score=74.62 Aligned_cols=68 Identities=19% Similarity=0.301 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhc-CCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 52 SLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLT-TPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 52 ~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~-~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
..+....++.+.++.||+.|++++|++|+++|++|+++++.+..+.. ... .+..+|+|.+|++||.++
T Consensus 35 ~~~~~~~~~~~~l~~le~~L~~~~~l~G~~~s~aDi~l~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 103 (118)
T cd03177 35 PPEEKLDKLEEALDFLETFLEGSDYVAGDQLTIADLSLVATVSTLEALLPL-------DLSKYPNVRAWLERLKAL 103 (118)
T ss_pred CCHHHHHHHHHHHHHHHHHHccCCeeCCCCcCHHHHHHHHHHHHHHHhcCC-------ChhhCchHHHHHHHHHcc
Confidence 34567788999999999999999999999999999999988876643 211 145799999999999986
No 20
>cd03209 GST_C_Mu GST_C family, Class Mu subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Mu subfamily is composed of eukaryotic GSTs. In rats, at least six distinct class Mu subunits have been identified, with homologous genes in humans for five of these subunits. Class Mu GSTs can form homodimers and heterodimers, giving a large number of possible isoenzymes that can be formed, all with overlapping activities but different substrate specificities. They are the m
Probab=98.93 E-value=3.5e-09 Score=75.93 Aligned_cols=67 Identities=22% Similarity=0.271 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+.....+.+.+..||+.|++++|+.|+++|.+|+++++.+..+.... ...+..+|+|.+|++||.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~T~aDi~l~~~~~~~~~~~------~~~~~~~P~l~~~~~rv~~~ 100 (121)
T cd03209 34 PDYLAKLPDKLKLFSDFLGDRPWFAGDKITYVDFLLYEALDQHRIFE------PDCLDAFPNLKDFLERFEAL 100 (121)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcCCCCccHHHHHHHHHHHHHHHhC------ccccccChHHHHHHHHHHHC
Confidence 33456778899999999999999999999999999988877654321 12357899999999999874
No 21
>cd00299 GST_C_family Glutathione S-transferase (GST) family, C-terminal alpha helical domain; a large, diverse group of cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. In addition, GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. This family, also referred to as soluble GSTs, is the largest family of GSH transferases and is only distantly related to the mitochondrial GSTs (GSTK). Soluble GSTs bear no structural similarity to microsomal GSTs (MAPEG family) and display additional activities unique to their group, such as catalyzing thiolysis, reduction and isomerization of certain compounds. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an activ
Probab=98.90 E-value=4.3e-09 Score=71.36 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHH
Q psy13308 53 LDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 123 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri 123 (166)
.++..+.+++.++.|++.|++++|++|++||.||+++++++..+.....+ ....+.+|+|.+|+++|
T Consensus 34 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~t~aDi~~~~~l~~~~~~~~~----~~~~~~~p~l~~~~~~~ 100 (100)
T cd00299 34 LEEAREELAAALAALEKLLAGRPYLAGDRFSLADIALAPVLARLDLLGPL----LGLLDEYPRLAAWYDRL 100 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCcCHHHHHHHHHHHHHHHhhhh----hhhhccCccHHHHHHhC
Confidence 35567788999999999999999999999999999999999877654211 11357899999999985
No 22
>cd03182 GST_C_GTT2_like GST_C family, Saccharomyces cerevisiae GTT2-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT2. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT2, a homodimer, exhibits GST activity with standard substrates. Strains with deleted GTT2 genes are viable but exhibit increased sensiti
Probab=98.87 E-value=5.8e-09 Score=73.70 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++...++.+.|..||+.|++++|++|+++|++|+++++.+..+..... .....+|+|.+|.+||.++
T Consensus 48 ~~~~~~l~~~l~~le~~L~~~~~l~gd~~t~aDi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 114 (117)
T cd03182 48 ERSKARAADFLAYLDTRLAGSPYVAGDRFTIADITAFVGLDFAKVVKL------RVPEELTHLRAWYDRMAAR 114 (117)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHhHHHHhcCC------CCccccHHHHHHHHHHHhc
Confidence 456778899999999999999999999999999998888875544321 1125899999999999875
No 23
>cd03190 GST_C_ECM4_like GST_C family, ECM4-like subfamily; composed of predominantly uncharacterized and taxonomically diverse proteins with similarity to the translation product of the Saccharomyces cerevisiae gene ECM4. ECM4, a gene of unknown function, is involved in cell surface biosynthesis and architecture. S. cerevisiae ECM4 mutants show increased amounts of the cell wall hexose, N-acetylglucosamine. More recently, global gene expression analysis shows that ECM4 is upregulated during genotoxic conditions and together with the expression profiles of 18 other genes could potentially differentiate between genotoxic and cytotoxic insults in yeast.
Probab=98.86 E-value=6.2e-09 Score=77.04 Aligned_cols=73 Identities=26% Similarity=0.355 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCch-HHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNR-FASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~-l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++...++.+.|+.||+.|++++|++|+++|+||+++++++..+......... ....+++||+|.+|++||.++
T Consensus 36 ~~~~~~l~~~l~~LE~~L~~~~yl~Gd~~TlADi~l~~~l~~~~~~~~~~~~~~~~~~~~~P~L~~w~~r~~~~ 109 (142)
T cd03190 36 DEAVDELFEALDRLEELLSDRRYLLGDRLTEADIRLFTTLIRFDAVYVQHFKCNLKRIRDYPNLWNYLRRLYQN 109 (142)
T ss_pred HHHHHHHHHHHHHHHHHHccCCeeeCCCccHHHHHHHHHHHHHHHHhhhhcccccchhhhCchHHHHHHHHhcC
Confidence 4567788999999999999999999999999999999888755221000000 012346899999999999874
No 24
>cd03178 GST_C_Ure2p_like GST_C family, Ure2p-like subfamily; composed of the Saccharomyces cerevisiae Ure2p and related GSTs. Ure2p is a regulator for nitrogen catabolism in yeast. It represses the expression of several gene products involved in the use of poor nitrogen sources when rich sources are available. A transmissible conformational change of Ure2p results in a prion called [Ure3], an inactive, self-propagating and infectious amyloid. Ure2p displays a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The N-terminal thioredoxin-fold domain is sufficient to induce the [Ure3] phenotype and is also called the prion domain of Ure2p. In addition to its role in nitrogen regulation, Ure2p confers protection to cells against heavy metal ion and oxidant toxicity, and shows glutathione (GSH) peroxidase activity. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of GSH with a wide range of en
Probab=98.86 E-value=5.5e-09 Score=73.38 Aligned_cols=67 Identities=15% Similarity=0.281 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++...++.+.++.||+.|++++|++|+++|.+|+++++++..+...+. . ..+.+|+|.+|.++|.++
T Consensus 39 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~aDi~l~~~~~~~~~~~~-----~-~~~~~p~l~~w~~~~~~~ 105 (113)
T cd03178 39 ERYTNEAKRLYGVLDKRLAGRDYLAGDEYSIADIAIFPWVRRLEWIGI-----D-DLDDFPNVKRWLDRIAAR 105 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcccCCCCCeeeeeHHHHHHHHHhccc-----c-chhhchHHHHHHHHHhhC
Confidence 446678889999999999999999999999999999888877654321 1 246899999999999875
No 25
>cd03207 GST_C_8 GST_C family, unknown subfamily 8; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.83 E-value=1.1e-08 Score=70.90 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+....++.+.++.||+.|++++|+.|+++|.+|++++..+....... .+.++|+|.+|++||.++
T Consensus 29 ~~~~~~~~~~l~~le~~l~~~~~l~g~~~t~aDi~~~~~~~~~~~~~--------~~~~~p~l~~w~~~~~~~ 93 (103)
T cd03207 29 MAGFGSYDDVLAALEQALAKGPYLLGERFTAADVLVGSPLGWGLQFG--------LLPERPAFDAYIARITDR 93 (103)
T ss_pred hhhhhhHHHHHHHHHHHHccCCcccCCccCHHHHHHHHHHHHHHHcC--------CCCCChHHHHHHHHHHcC
Confidence 44567789999999999999999999999999998888776554321 136899999999999864
No 26
>cd03181 GST_C_EFB1gamma GST_C family, Gamma subunit of Elongation Factor 1B (EFB1gamma) subfamily; EF1Bgamma is part of the eukaryotic translation elongation factor-1 (EF1) complex which plays a central role in the elongation cycle during protein biosynthesis. EF1 consists of two functionally distinct units, EF1A and EF1B. EF1A catalyzes the GTP-dependent binding of aminoacyl-tRNA to the ribosomal A site concomitant with the hydrolysis of GTP. The resulting inactive EF1A:GDP complex is recycled to the active GTP form by the guanine-nucleotide exchange factor EF1B, a complex composed of at least two subunits, alpha and gamma. Metazoan EFB1 contain a third subunit, beta. The EF1B gamma subunit contains a GST fold consisting of an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST-like domain of EF1Bgamma is believed to mediate the dimerization of the EF1 complex, which in yeast is a dimer of the heterotrimer EF1A:EF1Balpha:EF1Bgamma. In addition to its role
Probab=98.83 E-value=1.7e-08 Score=71.94 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+...+.+.+.|+.||+.|++++|++|+++|++|+++++.+..+..... . ...+..+|+|.+|.+||.++
T Consensus 39 ~~~~~~~~~~l~~le~~l~~~~~l~G~~~siaDi~l~~~~~~~~~~~~-~---~~~~~~~p~l~~w~~~~~~~ 107 (123)
T cd03181 39 EAALEELDRVLGVLEERLLKRTYLVGERLTLADIFVAGALLLGFTYVF-D---KEWRAKYPNVTRWFNTVVNQ 107 (123)
T ss_pred HHHHHHHHHHHHHHHHHHccCceeccCCccHHHHHHHHHHHHHHHHHc-C---HHHHHhChHHHHHHHHHHcC
Confidence 456777889999999999999999999999999999988876543211 1 12357899999999999753
No 27
>PLN02473 glutathione S-transferase
Probab=98.82 E-value=1.6e-08 Score=78.90 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+...++.+.++.||++|++++|++|+++|.||+++++.+..+.... .....++++|+|.+|.+||.++
T Consensus 135 ~~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~~~~~~~~~~~~~----~~~~~~~~~P~l~~w~~~~~~~ 202 (214)
T PLN02473 135 ELKVKFDKVLDVYENRLATNRYLGGDEFTLADLTHMPGMRYIMNET----SLSGLVTSRENLNRWWNEISAR 202 (214)
T ss_pred HHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHHHhcc----ccHHHHhcCHHHHHHHHHHhcC
Confidence 3456778899999999999999999999999998888776543321 1233468999999999999885
No 28
>cd03210 GST_C_Pi GST_C family, Class Pi subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Pi GST is a homodimeric eukaryotic protein. The human GSTP1 is mainly found in erythrocytes, kidney, placenta and fetal liver. It is involved in stress responses and in cellular proliferation pathways as an inhibitor of JNK (c-Jun N-terminal kinase). Following oxidative stress, monomeric GSTP1 dissociates from JNK and dimerizes, losing its ability to bind JNK and causing an incre
Probab=98.81 E-value=1.9e-08 Score=72.69 Aligned_cols=67 Identities=24% Similarity=0.320 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhhhcc---CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEK---NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~---~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+.....+.+.|..||+.|++ ++|++|+++|.||++++..+..+.... ...+..+|+|.+|.+||.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~~~~l~G~~~T~ADi~l~~~~~~~~~~~------~~~~~~~P~l~~~~~rv~~~ 103 (126)
T cd03210 34 DDYIKDLPEQLKPFEKLLSKNNGKGFIVGDKISFADYNLFDLLDIHLVLA------PGCLDAFPLLKAFVERLSAR 103 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeeeCCCccHHHHHHHHHHHHHHHhC------hHhhhcChHHHHHHHHHHhC
Confidence 34456678999999999974 589999999999998888776553221 22357999999999999885
No 29
>cd03201 GST_C_DHAR GST_C family, Dehydroascorbate Reductase (DHAR) subfamily; composed of plant-specific DHARs, monomeric enzymes catalyzing the reduction of DHA into ascorbic acid (AsA) using glutathione as the reductant. DHAR allows plants to recycle oxidized AsA before it is lost. AsA serves as a cofactor of violaxanthin de-epoxidase in the xanthophyll cycle and as an antioxidant in the detoxification of reactive oxygen species. Because AsA is the major reductant in plants, DHAR serves to regulate their redox state. It has been suggested that a significant portion of DHAR activity is plastidic, acting to reduce the large amounts of ascorbate oxidized during hydrogen peroxide scavenging by ascorbate peroxidase. DHAR contains a conserved cysteine in its active site and in addition to its reductase activity, shows thiol transferase activity similar to glutaredoxins.
Probab=98.81 E-value=1.3e-08 Score=73.51 Aligned_cols=71 Identities=11% Similarity=0.147 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcc-CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHH--HHhhChhHHHHHHHHHHh
Q psy13308 53 LDQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAS--TIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~--~l~~~P~L~~y~~Ri~~r 126 (166)
.++..+.+.+.|..||+.|++ ++||+||++|.||+++++.+..+.... ..... ..+.+|+|.+|.+||.+|
T Consensus 28 ~~~~~~~l~~~l~~Le~~L~~~~~fl~Gd~~TlADi~l~~~l~~l~~~~---~~~~~~~~~~~~P~l~~w~~rl~~r 101 (121)
T cd03201 28 NDGTEQALLDELEALEDHLKENGPFINGEKISAVDLSLAPKLYHLEIAL---GHYKNWSVPESLTSVKSYMKALFSR 101 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCHHhHHHHHHHHHHHHHH---HHhcCCCCcccchHHHHHHHHHHCC
Confidence 356677889999999999985 899999999999999888776554310 00001 126899999999999875
No 30
>PRK10387 glutaredoxin 2; Provisional
Probab=98.81 E-value=1e-08 Score=79.61 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
+++.+.+++.|+.||+.|++ +|++|++||+||+++++++..+...+. ++.+|+|.+|.+||.+|-
T Consensus 141 ~~~~~~~~~~l~~le~~L~~-~~l~G~~~s~ADi~l~~~l~~~~~~~~--------~~~~p~l~~w~~r~~~r~ 205 (210)
T PRK10387 141 PGLIKEINADLRALDPLIVK-PNAVNGELSTDDIHLFPILRNLTLVKG--------IEWPPRVADYRDNMSKKT 205 (210)
T ss_pred HHHHHHHHHHHHHHHHHhcC-ccccCCCCCHHHHHHHHHHhcceeecC--------CCCCHHHHHHHHHHHHHh
Confidence 35678899999999999987 999999999999999999876644211 234699999999999874
No 31
>cd03204 GST_C_GDAP1 GST_C family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have been reported to cause both axonal and demyelinating autosomal-recessive Charcot-Marie-Tooth (CMT) type 4A neuropathy. CMT is characterized by slow and progressive weakness and atrophy of muscles. Sequence analysis of GDAP1 shows similarities and differences with GSTs; it appears to contain both N-terminal thioredoxin-fold and C-terminal alpha helical domains of GSTs, however, it also contains additional C-terminal transmembrane domains unlike GSTs. GDAP1 is mainly expressed in neuronal cells and is localized in the mitochondria through its transmembrane domains. It does not exhibit GST activity using standard substrates.
Probab=98.81 E-value=1.7e-08 Score=72.24 Aligned_cols=70 Identities=16% Similarity=0.141 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHhhhccC----------CccCCCCCChhHHHHHHHHHHHhcCCCCCchHHH-HHhhChhHHHHHHH
Q psy13308 54 DQVYKDVDKCCQSLSERLEKN----------NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAS-TIRAYPNLVEHCTR 122 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~----------~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~-~l~~~P~L~~y~~R 122 (166)
+....++.+.++.||++|+++ +|++|+++|+||+++++.+..+.....+. .. ....+|+|.+|.+|
T Consensus 28 ~~~~~~l~~~l~~LE~~L~~~~~~~~~~~~~~yL~Gd~~TlADi~l~~~l~~~~~~~~~~---~~~~~~~~P~l~~w~~r 104 (111)
T cd03204 28 KKILDELEMVLDQVEQELQRRKEETEEQKCQLWLCGDTFTLADISLGVTLHRLKFLGLSR---RYWGNGKRPNLEAYFER 104 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccCCCccCCCCCCHHHHHHHHHHHHHHHcCccc---cccccccChHHHHHHHH
Confidence 456778889999999999765 59999999999999998887765433210 10 13579999999999
Q ss_pred HHHh
Q psy13308 123 IEQN 126 (166)
Q Consensus 123 i~~r 126 (166)
|.+|
T Consensus 105 v~aR 108 (111)
T cd03204 105 VLQR 108 (111)
T ss_pred HHcC
Confidence 9875
No 32
>cd03185 GST_C_Tau GST_C family, Class Tau subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The plant-specific class Tau GST subfamily has undergone extensive gene duplication. The Arabidopsis and Oryza genomes contain 28 and 40 Tau GSTs, respectively. They are primarily responsible for herbicide detoxification together with class Phi GSTs, showing class specificity in substrate preference. Tau enzymes are highly efficient in detoxifying diphenylether and aryloxyphenoxypropi
Probab=98.80 E-value=2.1e-08 Score=71.67 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcC-CCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTT-PLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~-~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++....+.+.++.||+.|++++|+.|+++|.||+++++++..+... ......+. ..+.+|+|.+|+++|.++
T Consensus 34 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~t~ADi~l~~~~~~~~~~~~~~~~~~~-~~~~~p~l~~w~~~~~~~ 106 (126)
T cd03185 34 EKAKEEALEALKVLEEELGGKPFFGGDTIGYVDIALGSFLGWFRAYEEVGGVKLL-DEEKTPLLAAWAERFLEL 106 (126)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHHHHHHHcCcccc-CcccCchHHHHHHHHHhc
Confidence 4567788999999999999999999999999999988877654321 00000000 136799999999999863
No 33
>cd03183 GST_C_Theta GST_C family, Class Theta subfamily; composed of eukaryotic class Theta GSTs and bacterial dichloromethane (DCM) dehalogenase. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Mammalian class Theta GSTs show poor GSH conjugating activity towards the standard substrates, CDNB and ethacrynic acid, differentiating them from other mammalian GSTs. GSTT1-1 shows similar cataytic activity as bacterial DCM dehalogenase, catalyzing the GSH-dependent hydrolytic dehalogenatio
Probab=98.79 E-value=1.7e-08 Score=72.46 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHhh-hccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSER-LEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~-L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+...+.+.+.++.||++ +++++|++|+++|+||++++..+........ ..+..+|+|.+|++||.++
T Consensus 44 ~~~~~~~~~~l~~le~~l~~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~------~~~~~~p~l~~w~~~~~~~ 111 (126)
T cd03183 44 KKAEENLEESLDLLENYFLKDKPFLAGDEISIADLSAVCEIMQPEAAGY------DVFEGRPKLAAWRKRVKEA 111 (126)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcccCCCCCHHHHHHHHHHHHHHhcCC------cccccCchHHHHHHHHHHh
Confidence 34566788999999997 5667899999999999988887755433221 1246899999999999996
No 34
>cd03179 GST_C_1 GST_C family, unknown subfamily 1; composed of uncharacterized bacterial proteins, with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.79 E-value=2.1e-08 Score=69.28 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHH
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIE 124 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~ 124 (166)
+....++++.++.||+.|++++|+.|+++|.||++++..+..+..... . +.++|+|.+|.+||+
T Consensus 42 ~~~~~~~~~~l~~le~~L~~~~~l~g~~~slaDi~~~~~~~~~~~~~~-----~--~~~~p~l~~~~~~~~ 105 (105)
T cd03179 42 AFLRERGHAALAVLEAHLAGRDFLVGDALTIADIALAAYTHVADEGGF-----D--LADYPAIRAWLARIE 105 (105)
T ss_pred HHHHHHHHHHHHHHHHHHccCccccCCCCCHHHHHHHHHHHhccccCC-----C--hHhCccHHHHHHhhC
Confidence 446777888999999999999999999999999998887775533211 1 468999999999973
No 35
>cd03197 GST_C_mPGES2 GST_C family; microsomal Prostaglandin E synthase Type 2 (mPGES2) subfamily; mPGES2 is a membrane-anchored dimeric protein containing a CXXC motif which catalyzes the isomerization of PGH2 to PGE2. Unlike cytosolic PGE synthase (cPGES) and microsomal PGES Type 1 (mPGES1), mPGES2 does not require glutathione (GSH) for its activity, although its catalytic rate is increased two- to four-fold in the presence of DTT, GSH, or other thiol compounds. PGE2 is widely distributed in various tissues and is implicated in the sleep/wake cycle, relaxation/contraction of smooth muscle, excretion of sodium ions, maintenance of body temperature, and mediation of inflammation. mPGES2 contains an N-terminal hydrophobic domain which is membrane associated and a C-terminal soluble domain with a GST-like structure. The C-terminus contains two structural domains a N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. The GST active site is located in a cleft between t
Probab=98.78 E-value=3.2e-08 Score=74.14 Aligned_cols=74 Identities=15% Similarity=0.224 Sum_probs=52.1
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 46 LKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 46 ~G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
+++.....+.+++.+.+-. ++..++++|+.|++||+||+.+|+.+..+...+ .+. .+.++|||.+|.+||++
T Consensus 74 ~~i~~D~r~~L~~a~~~w~---~~~~~~~~FlaGd~ptIADisvyg~l~s~e~~~----~~~-Dl~~~p~I~~W~eRm~~ 145 (149)
T cd03197 74 RLLQDDVREWLYDALNTWV---AALGKDRQFHGGSKPNLADLAVYGVLRSVEGHP----AFK-DMVEETKIGEWYERMDA 145 (149)
T ss_pred cCCCchHHHHHHHHHHHHH---HHhcCCCCccCCCCCCHHHHHHHHHHHHHHHhc----ccc-chhhCcCHHHHHHHHHH
Confidence 4553333444555554443 334456789999999999999999998876542 111 35689999999999998
Q ss_pred hh
Q psy13308 126 NY 127 (166)
Q Consensus 126 r~ 127 (166)
..
T Consensus 146 ~v 147 (149)
T cd03197 146 AV 147 (149)
T ss_pred Hh
Confidence 53
No 36
>PRK13972 GSH-dependent disulfide bond oxidoreductase; Provisional
Probab=98.77 E-value=1.7e-08 Score=79.01 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 56 VYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
....+.+.+..||++|++++|++|+++|.||+++++++..+..... .+++||+|.+|.+||.++
T Consensus 133 ~~~~~~~~l~~le~~L~~~~~l~Gd~~t~ADi~l~~~~~~~~~~~~-------~~~~~P~l~~w~~r~~~r 196 (215)
T PRK13972 133 YQVETQRLYHVLNKRLENSPWLGGENYSIADIACWPWVNAWTRQRI-------DLAMYPAVKNWHERIRSR 196 (215)
T ss_pred HHHHHHHHHHHHHHHhccCccccCCCCCHHHHHHHHHHHHHhhcCC-------cchhCHHHHHHHHHHHhC
Confidence 4456778999999999999999999999999988887755433211 147899999999999885
No 37
>cd03184 GST_C_Omega GST_C family, Class Omega subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Omega GSTs show little or no GSH-conjugating activity towards standard GST substrates. Instead, they catalyze the GSH dependent reduction of protein disulfides, dehydroascorbate and monomethylarsonate, activities which are more characteristic of glutaredoxins. They contain a conserved cysteine equivalent to the first cysteine in the CXXC motif of glutaredoxins, which is a re
Probab=98.77 E-value=1.7e-08 Score=72.62 Aligned_cols=73 Identities=16% Similarity=0.298 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHHHHHhhhcc--CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 52 SLDQVYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 52 ~~~~~~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
..++..+++.+.|+.||+.|++ ++|+.|+++|++|+++++++..+....... .....++.+|+|.+|++||.+
T Consensus 29 ~~~~~~~~~~~~l~~le~~L~~~~~~yl~G~~~t~aDi~~~~~~~~~~~~~~~~-~~~~~~~~~p~l~~w~~r~~~ 103 (124)
T cd03184 29 DREEKKAELRSALENLEEELTKRGTPFFGGDSPGMVDYMIWPWFERLEALKLLL-GYEFPLDRFPKLKKWMDAMKE 103 (124)
T ss_pred cchhhHHHHHHHHHHHHHHHHhcCCCCcCCCCccHHHHHhhHHHHHHHHHHhhc-cccCCcccChHHHHHHHHhcc
Confidence 4456788899999999999986 899999999999999998886554321000 000124789999999999986
No 38
>cd03200 GST_C_JTV1 GST_C family, JTV-1 subfamily; composed of uncharacterized proteins with similarity to the translation product of the human JTV-1 gene. Human JTV-1, a gene of unknown function, initiates within the human PMS2 gene promoter, but is transcribed from the opposite strand. PMS2 encodes a protein involved in DNA mismatch repair and is mutated in a subset of patients with hereditary nonpolyposis colon cancer. It is unknown whether the expression of JTV-1 affects that of PMS2, or vice versa, as a result of their juxtaposition. JTV-1 is up-regulated while PMS2 is down-regulated in tumor cell spheroids that show increased resistance to anticancer cytotoxic drugs compared with tumor cell monolayers indicating that suppressed DNA mismatch repair may be a mechanism for multicellular resistance to alkylating agents.
Probab=98.75 E-value=2.9e-08 Score=68.95 Aligned_cols=58 Identities=17% Similarity=0.185 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 58 KDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 58 ~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
.+..+.++.||++|++++|+.|+++|+||+++++.+.. ... ....+|||.+|.+||++
T Consensus 38 ~~~~~~l~~le~~L~~~~fl~Gd~~tiADi~l~~~l~~---~~~-------~~~~~p~l~~w~~r~~~ 95 (96)
T cd03200 38 KEKAAVLRALNSALGRSPWLVGSEFTVADIVSWCALLQ---TGL-------ASAAPANVQRWLKSCEN 95 (96)
T ss_pred HHHHHHHHHHHHHHcCCCccCCCCCCHHHHHHHHHHHH---ccc-------ccccChHHHHHHHHHHh
Confidence 34557888999999999999999999999988877652 111 12579999999999986
No 39
>cd03198 GST_C_CLIC GST_C family, Chloride Intracellular Channel (CLIC) subfamily; composed of CLIC1-5, p64, parchorin, and similar proteins. They are auto-inserting, self-assembling intracellular anion channels involved in a wide variety of functions including regulated secretion, cell division, and apoptosis. They can exist in both water-soluble and membrane-bound states and are found in various vesicles and membranes. Biochemical studies of the C. elegans homolog, EXC-4, show that the membrane localization domain is present in the N-terminal part of the protein. The structure of soluble human CLIC1 reveals that it is monomeric and adopts a fold similar to GSTs, containing an N-terminal domain with a thioredoxin fold and a C-terminal alpha helical domain. Upon oxidation, the N-terminal domain of CLIC1 undergoes a structural change to form a non-covalent dimer stabilized by the formation of an intramolecular disulfide bond between two cysteines that are far apart in the reduced form. T
Probab=98.75 E-value=1.6e-08 Score=74.68 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcc----------------CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhH
Q psy13308 53 LDQVYKDVDKCCQSLSERLEK----------------NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNL 116 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~~----------------~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L 116 (166)
.+.....+.+.|+.|+++|++ ++|++|+++|+|||.+++++..+.........+ ....++|+|
T Consensus 27 ~e~~~~~l~~~L~~ld~~L~~~~~~~~~~~~~~~~~~~~fL~Gd~fTlADi~l~p~L~~~~~~~~~~~g~-~i~~~~P~L 105 (134)
T cd03198 27 NENLEKGLLKALKKLDDYLNSPLPDEIDSAEDEGVSQRKFLDGDELTLADCNLLPKLHIVKVVAKKYRNF-EIPADLTGL 105 (134)
T ss_pred hHHHHHHHHHHHHHHHHHHccCccccccccccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CccccCHHH
Confidence 455677889999999999986 789999999999999999987552210000000 113789999
Q ss_pred HHHHHHHHHh
Q psy13308 117 VEHCTRIEQN 126 (166)
Q Consensus 117 ~~y~~Ri~~r 126 (166)
.+|++||.+|
T Consensus 106 ~aw~~ri~aR 115 (134)
T cd03198 106 WRYLKNAYQR 115 (134)
T ss_pred HHHHHHHHCC
Confidence 9999999876
No 40
>cd03192 GST_C_Sigma_like GST_C family, Class Sigma_like; composed of GSTs belonging to class Sigma and similar proteins, including GSTs from class Mu, Pi, and Alpha. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Vertebrate class Sigma GSTs are characterized as GSH-dependent hematopoietic prostaglandin (PG) D synthases and are responsible for the production of PGD2 by catalyzing the isomerization of PGH2. The functions of PGD2 include the maintenance of body temperature, inhibition
Probab=98.75 E-value=2.5e-08 Score=69.12 Aligned_cols=64 Identities=20% Similarity=0.333 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHhhhcc--CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHH
Q psy13308 55 QVYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 123 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri 123 (166)
.....+.+.++.|++.|++ ++|++|+++|.+|++++.++..+.... +.. .+..+|+|.+|++||
T Consensus 39 ~~~~~~~~~l~~le~~l~~~~~~~~~G~~~s~aDi~l~~~~~~~~~~~---~~~--~~~~~p~l~~~~~~~ 104 (104)
T cd03192 39 FLKEAIPKYLKKLEKILKENGGGYLVGDKLTWADLVVFDVLDYLLYLD---PKL--LLKKYPKLKALRERV 104 (104)
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCeeeCCCccHHHHHHHHHHHHHHhhC---chh--hHHhChhHHHHHHhC
Confidence 3566678899999999988 899999999999999999987664331 111 257899999999985
No 41
>cd03208 GST_C_Alpha GST_C family, Class Alpha subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Alpha subfamily is composed of vertebrate GSTs which can form homodimer and heterodimers. There are at least six types of class Alpha GST subunits in rats, four of which have human counterparts, resulting in many possible isoenzymes with different activities, tissue distribution and substrate specificities. Human GSTA1-1 and GSTA2-2 show high GSH peroxidase activity. GS
Probab=98.73 E-value=3e-08 Score=73.08 Aligned_cols=62 Identities=21% Similarity=0.274 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhhc--cCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 59 DVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 59 ~~~~~L~~Le~~L~--~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.+.+.|+.||+.|+ +++|+.|+++|.||++++..+..+.... ...+..+|+|.+|.+||.++
T Consensus 43 ~~~~~l~~lE~~L~~~~~~~l~G~~~T~ADi~l~~~l~~~~~~~------~~~l~~~P~l~~~~~rv~~~ 106 (137)
T cd03208 43 AKNRYFPVFEKVLKSHGQDFLVGNKLSRADIHLLEAILMVEELD------PSLLSDFPLLQAFKTRISNL 106 (137)
T ss_pred HHHHHHHHHHHHHHhCCCCeeeCCCCCHHHHHHHHHHHHHHHhc------hhhhccChHHHHHHHHHHcC
Confidence 45789999999998 6789999999999999998887654321 22457999999999999864
No 42
>cd03191 GST_C_Zeta GST_C family, Class Zeta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. Class Zeta GSTs, also known as maleylacetoacetate (MAA) isomerases, catalyze the isomerization of MAA to fumarylacetoacetate, the penultimate step in tyrosine/phenylalanine catabolism, using GSH as a cofactor. They show little GSH-conjugating activity towards traditional GST substrates, but display modest GSH peroxidase activity. They are also implicated in the detoxification of th
Probab=98.73 E-value=4.8e-08 Score=69.60 Aligned_cols=63 Identities=19% Similarity=0.287 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhhc--cCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 57 YKDVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 57 ~~~~~~~L~~Le~~L~--~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.+.+.+.|..||++|+ .++|++|+++|.||++++.++........ .++.+|+|.+|.+||.++
T Consensus 46 ~~~~~~~l~~le~~L~~~~~~~l~G~~~t~ADi~~~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 110 (121)
T cd03191 46 RHWIARGFAALEKLLAQTAGKFCFGDEPTLADICLVPQVYNARRFGV-------DLSPYPTIARINEACLEL 110 (121)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeecCCcCCHHHHHHHHHHHHHHHhCC-------CcccCcHHHHHHHHHHhC
Confidence 3567889999999997 45799999999999999988765433221 147899999999999874
No 43
>PRK09481 sspA stringent starvation protein A; Provisional
Probab=98.68 E-value=4.4e-08 Score=76.66 Aligned_cols=68 Identities=12% Similarity=0.172 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++..+.+.+.+..||++|++++|++|+++|.||+++++++..+.....+ + ....+|+|.+|++||.++
T Consensus 126 ~~~~~~l~~~l~~le~~L~~~~~l~G~~~t~AD~~l~~~~~~~~~~~~~---~--~~~~~p~l~~w~~~~~~r 193 (211)
T PRK09481 126 DAARKQLREELLAIAPVFGEKPYFMSEEFSLVDCYLAPLLWRLPVLGIE---L--SGPGAKELKGYMTRVFER 193 (211)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCCCccHHHHHHHHHHHHHHhcCCC---C--CCCCChhHHHHHHHHhcc
Confidence 4456678888999999999999999999999999999888765443211 1 114799999999999876
No 44
>PLN02395 glutathione S-transferase
Probab=98.67 E-value=8.1e-08 Score=74.88 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+..+.+.+.++.||+.|++++|++|+++|.||+++++++..+... . .....++++|+|.+|.+||.++
T Consensus 134 ~~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~-~---~~~~~~~~~p~L~~w~~~~~~r 201 (215)
T PLN02395 134 ESEEKLAKVLDVYEARLSKSKYLAGDFVSLADLAHLPFTEYLVGP-I---GKAYLIKDRKHVSAWWDDISSR 201 (215)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCcCHHHHHHHHHHHHHhcc-c---chhhhhccCchHHHHHHHHHcC
Confidence 345667889999999999999999999999999988877655321 1 1122357899999999999885
No 45
>PRK10542 glutathionine S-transferase; Provisional
Probab=98.64 E-value=5.1e-08 Score=75.19 Aligned_cols=64 Identities=19% Similarity=0.265 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 56 VYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
....+.+.++.||+.|++++|++|+++|.||+++++++........ .++.+|+|.+|.+||.++
T Consensus 125 ~~~~~~~~l~~le~~L~~~~~l~G~~~s~ADi~l~~~~~~~~~~~~-------~~~~~p~l~~w~~~~~~~ 188 (201)
T PRK10542 125 VRAQLEKKFQYVDEALADEQWICGQRFTIADAYLFTVLRWAYAVKL-------NLEGLEHIAAYMQRVAER 188 (201)
T ss_pred HHHHHHHHHHHHHHHhcCCCeeeCCCCcHHhHHHHHHHHHhhccCC-------CcccchHHHHHHHHHHcC
Confidence 4567889999999999999999999999999998888765533211 146899999999999875
No 46
>PRK11752 putative S-transferase; Provisional
Probab=98.59 E-value=1.3e-07 Score=76.94 Aligned_cols=72 Identities=11% Similarity=0.156 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+...++.+.|+.||++|++++||+|+++|+||+++++++..+.........-...++.||+|.+|.+||.++
T Consensus 178 ~~~~~~~~~L~~le~~L~~~~fl~Gd~~TlADi~l~~~l~~l~~~~~~~~~~~~~~~~~P~L~~w~~rv~~r 249 (264)
T PRK11752 178 RFTMEAKRQLDVLDKQLAEHEYIAGDEYTIADIAIWPWYGNLVLGNLYDAAEFLDVGSYKHVQRWAKEIAER 249 (264)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCccCHHHHHHHHHHHHHhhccccccccccCcccCHHHHHHHHHHHhC
Confidence 345567889999999999999999999999999998887655321100000001146899999999999986
No 47
>PTZ00057 glutathione s-transferase; Provisional
Probab=98.59 E-value=1.4e-07 Score=73.56 Aligned_cols=65 Identities=23% Similarity=0.339 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHHhhhccC--CccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 56 VYKDVDKCCQSLSERLEKN--NFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~~--~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
..+.+.+.+..||+.|+++ +|+.|+++|+||++++..+..+... . ...++++|+|.+|.+||.++
T Consensus 124 ~~~~~~~~l~~le~~L~~~~~~~l~Gd~~T~AD~~l~~~~~~~~~~-~-----~~~l~~~P~l~~~~~r~~~~ 190 (205)
T PTZ00057 124 LNEELPKWSGYFENILKKNHCNYFVGDNLTYADLAVFNLYDDIETK-Y-----PNSLKNFPLLKAHNEFISNL 190 (205)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeeeCCcccHHHHHHHHHHHHHHHh-C-----hhhhccChhHHHHHHHHHhC
Confidence 4567788999999999754 8999999999999999887655321 1 23467999999999999874
No 48
>COG0625 Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=1.2e-07 Score=74.04 Aligned_cols=67 Identities=15% Similarity=0.165 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
+...+...+.+..+++.|++++|++|+++|+||+.+++++..+..... .++.+|+|.+|.+||.++-
T Consensus 130 ~~~~~~~~~~l~~le~~L~~~~~l~G~~~tiAD~~~~~~~~~~~~~~~-------~~~~~p~l~~w~~r~~~rp 196 (211)
T COG0625 130 EAARAEIRALLALLEALLADGPYLAGDRFTIADIALAPLLWRLALLGE-------ELADYPALKAWYERVLARP 196 (211)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccCCCCCHHHHHHHHHHHHhhhcCc-------ccccChHHHHHHHHHHcCC
Confidence 345677889999999999999999999999999988888876443321 1278999999999998553
No 49
>TIGR02182 GRXB Glutaredoxin, GrxB family. This model includes the highly abundant E. coli GrxB (Grx2) glutaredoxin which is notably longer than either GrxA or GrxC. Unlike the other two E. coli glutaredoxins, GrxB appears to be unable to reduce ribonucleotide reductase, and may have more to do with resistance to redox stress.
Probab=98.58 E-value=1.6e-07 Score=73.68 Aligned_cols=64 Identities=13% Similarity=0.225 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhCh-hHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYP-NLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P-~L~~y~~Ri~~r~ 127 (166)
++..+.+++.|+.||+.|++++|++| ++|+||+++++++..+.... .+ .+| ||.+|.+||+++.
T Consensus 140 ~~~~~~~~~~l~~le~~L~~~~~l~g-~~TiADi~l~~~l~~~~~~~--------~~-~~p~~l~~w~~Ri~ar~ 204 (209)
T TIGR02182 140 PGLLEEINADLEELDKLIDGPNAVNG-ELSEDDILVFPLLRNLTLVA--------GI-NWPSRVADYLDNMSKKS 204 (209)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCC-CCCHHHHHHHHHhcCeeeec--------CC-CCChHHHHHHHHHHHHh
Confidence 45678899999999999999999965 69999999999987443221 01 366 9999999999874
No 50
>KOG0406|consensus
Probab=98.56 E-value=4.1e-08 Score=78.34 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=74.1
Q ss_pred hh-hHHHhHHHHHHHHHHHhhhcccC---------------CCCHHHHHHHHHHHHHHHHhhhc-cCCccCCCCCChhHH
Q psy13308 25 WP-LNIYLTYKKKLTVQHRLKTLKWL---------------EKSLDQVYKDVDKCCQSLSERLE-KNNFFFKDKPTELDA 87 (166)
Q Consensus 25 ~p-l~~~l~~~~r~~~~~~l~~~G~g---------------~~~~~~~~~~~~~~L~~Le~~L~-~~~yl~Gd~pT~aD~ 87 (166)
|| -+.++|..-..++++|+++.-++ +...+.+.+++.+.|..||+.|+ +++||+|++++.+|+
T Consensus 83 w~~~~~iLP~DPy~Ra~arfwa~~id~~~~~~~~~~~~~~~~e~~~~~~~e~~e~l~~lE~el~k~k~~fgG~~~G~vDi 162 (231)
T KOG0406|consen 83 WPSGPPILPSDPYERAQARFWAEYIDKKVFFVGRFVVAAKGGEEQEAAKEELREALKVLEEELGKGKDFFGGETIGFVDI 162 (231)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCHhhh
Confidence 66 47788888888888888865443 12335567889999999999999 899999999999999
Q ss_pred HHHHHHHHHhcCCCCCchHH--HHH--hhChhHHHHHHHHHHh
Q psy13308 88 LLFGHIYAVLTTPLPNNRFA--STI--RAYPNLVEHCTRIEQN 126 (166)
Q Consensus 88 ~vf~~l~~~~~~~~~~~~l~--~~l--~~~P~L~~y~~Ri~~r 126 (166)
++.+.+..+...-. .+. ... .++|+|.+|.+||.++
T Consensus 163 ~~~p~~~~~~~~~~---~~~~~~~~~~~~~P~L~~W~~~~~~~ 202 (231)
T KOG0406|consen 163 AIGPSFERWLAVLE---KFGGVKFIIEEETPKLIKWIKRMKED 202 (231)
T ss_pred hHHhhHHHHHHHHH---HhcCcccCCCCCCccHHHHHHHHhcC
Confidence 88866665544311 111 122 5899999999999764
No 51
>TIGR01262 maiA maleylacetoacetate isomerase. Maleylacetoacetate isomerase is an enzyme of tyrosine and phenylalanine catabolism. It requires glutathione and belongs by homology to the zeta family of glutathione S-transferases. The enzyme (EC 5.2.1.2) is described as active also on maleylpyruvate, and the example from a Ralstonia sp. catabolic plasmid is described as a maleylpyruvate isomerase involved in gentisate catabolism.
Probab=98.55 E-value=1.3e-07 Score=73.36 Aligned_cols=64 Identities=20% Similarity=0.269 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHhhhcc--CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 56 VYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
..+.+.+.|+.||++|++ ++|++|+++|+||++++..+........ .+++||+|.+|.+||.++
T Consensus 130 ~~~~~~~~l~~le~~L~~~~~~~l~G~~~T~ADi~~~~~l~~~~~~~~-------~~~~~p~l~~~~~~~~~r 195 (210)
T TIGR01262 130 YQHWISKGFAALEALLQPHAGAFCVGDTPTLADLCLVPQVYNAERFGV-------DLTPYPTLRRIAAALAAL 195 (210)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEeeCCCCCHHHHHHHHHHHHHHHcCC-------CcccchHHHHHHHHHhcC
Confidence 345678899999999986 4699999999999999998876543211 146899999999999886
No 52
>cd03195 GST_C_4 GST_C family, unknown subfamily 4; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.48 E-value=7.4e-07 Score=63.43 Aligned_cols=64 Identities=13% Similarity=-0.006 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHHhhhc-cCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 53 LDQVYKDVDKCCQSLSERLE-KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 53 ~~~~~~~~~~~L~~Le~~L~-~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.+.+...+++.+..+|..|+ +++|++| ++|+||++++..+..+..... .+ . |++.+|++||.+|
T Consensus 40 ~~~~~~~~~~~~~~le~~l~~~~~~l~G-~fSiAD~~l~~~~~~~~~~g~-------~l-~-p~l~ay~~r~~~r 104 (114)
T cd03195 40 SEAAQAAAEKLIAVAEALLPPGAANLFG-EWCIADTDLALMLNRLVLNGD-------PV-P-ERLRDYARRQWQR 104 (114)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCcccC-CccHHHHHHHHHHHHHHHcCC-------CC-C-HHHHHHHHHHHCC
Confidence 35677788999999999995 5489999 599999988877765544321 12 2 9999999999886
No 53
>cd03203 GST_C_Lambda GST_C family, Class Lambda subfamily; composed of plant-specific class Lambda GSTs. GSTs are cytosolic, usually dimeric, proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. The class Lambda subfamily was recently discovered, together with dehydroascorbate reductases (DHARs), as two outlying groups of the GST superfamily in Arabidopsis thaliana, which contain conserved active site cysteines. Characterization of recombinant A. thaliana proteins show that Lambda class GSTs are monomeric, similar
Probab=98.48 E-value=3e-07 Score=66.08 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhhhc---cCCccCCCCCChhHHHHHHHHHHHhc-CCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 59 DVDKCCQSLSERLE---KNNFFFKDKPTELDALLFGHIYAVLT-TPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 59 ~~~~~L~~Le~~L~---~~~yl~Gd~pT~aD~~vf~~l~~~~~-~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++.+.++.||+.|+ +++|+.| ++|+||+++++++..+.. .+. .... ...+++|+|.+|++||.++
T Consensus 34 ~~~~~l~~Le~~L~~~~~~~fl~G-~~tlADi~l~~~~~~~~~~~~~-~~~~-~~~~~~P~l~~W~~~~~~r 102 (120)
T cd03203 34 EAAAALDYIENALSKFDDGPFFLG-QFSLVDIAYVPFIERFQIFLSE-LFNY-DITEGRPNLAAWIEEMNKI 102 (120)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcCC-CccHHHHHHHHHHHHHHHHHHH-hcCc-cccccCcHHHHHHHHHhcc
Confidence 44667888888886 5899999 999999999888864421 000 0001 1125899999999999876
No 54
>PLN02378 glutathione S-transferase DHAR1
Probab=98.44 E-value=7e-07 Score=70.10 Aligned_cols=70 Identities=13% Similarity=0.171 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHHHhhhc--cCCccCCCCCChhHHHHHHHHHHHhcC-C-CCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTT-P-LPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~--~~~yl~Gd~pT~aD~~vf~~l~~~~~~-~-~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+.....+.+.|..||+.|+ +++|++|+++|.||+++++++..+... . ... ....+++|+|.+|.+||.++
T Consensus 117 ~~~~~~~~~~l~~le~~L~~~~~~fl~Gd~~T~ADi~l~~~~~~l~~~~~~~~~---~~~~~~~p~l~~w~~~~~~r 190 (213)
T PLN02378 117 DGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKLYHLQVALGHFKS---WSVPESFPHVHNYMKTLFSL 190 (213)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCCCcCCCCCchhhHHHHHHHHHHHHHHHHhcC---CCchhHhHHHHHHHHHHhcC
Confidence 3445677888999999997 578999999999999999987654321 0 000 01246899999999999874
No 55
>cd03205 GST_C_6 GST_C family, unknown subfamily 6; composed of uncharacterized bacterial proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.40 E-value=1.1e-06 Score=60.53 Aligned_cols=63 Identities=14% Similarity=0.093 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHH
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRI 123 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri 123 (166)
+....++.++|..||++|++++| +++|+||++++..+........ . .....++|+|.+|.+||
T Consensus 36 ~~~~~~~~~~l~~le~~L~~~~~---d~~TlADi~l~~~l~~~~~~~~-~---~~~~~~~p~l~~w~~rm 98 (98)
T cd03205 36 ERQRGKIERALDALEAELAKLPL---DPLDLADIAVACALGYLDFRHP-D---LDWRAAHPALAAWYARF 98 (98)
T ss_pred HHHHHHHHHHHHHHHHhhhhCCC---CCCCHHHHHHHHHHHHHHhHcc-C---cchhhhChHHHHHHHhC
Confidence 45678889999999999999888 8999999988888866543211 1 11247899999999986
No 56
>cd03194 GST_C_3 GST_C family, unknown subfamily 3; composed of uncharacterized proteins with similarity to GSTs. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain.
Probab=98.39 E-value=1.8e-06 Score=61.50 Aligned_cols=63 Identities=17% Similarity=0.169 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHhhh---ccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERL---EKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L---~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
+.+.....+.+..++..| ++++|++|+ +|.||+++++.+..+.... ++..|+|.+|++||.++
T Consensus 40 ~~~~~~~~~~~~~le~~l~~~~~~~yl~Gd-~T~ADi~l~~~~~~~~~~~---------~~~~P~l~~~~~rv~~r 105 (114)
T cd03194 40 EAVQADIARIEAIWAECLARFQGGPFLFGD-FSIADAFFAPVVTRFRTYG---------LPLSPAAQAYVDALLAH 105 (114)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCC-CcHHHHHHHHHHHHHHHcC---------CCCCHHHHHHHHHHHCC
Confidence 445555666666666655 567899999 9999998888876553321 11139999999999864
No 57
>TIGR00862 O-ClC intracellular chloride channel protein. These proteins are thought to function in the regulation of the membrane potential and in transepithelial ion absorption and secretion in the kidney.
Probab=98.33 E-value=8.7e-07 Score=71.26 Aligned_cols=72 Identities=15% Similarity=0.134 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHhhhc------------------cCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChh
Q psy13308 54 DQVYKDVDKCCQSLSERLE------------------KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPN 115 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~------------------~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~ 115 (166)
+++...+.+.++.|++.|+ +++||.|+++|+|||++++.+..+...-..... -.+.+++|+
T Consensus 122 ~~~~~~l~~~l~~Le~~L~~~~~~~~~~~~~~~~~~~~~~f~~Gd~~tlaD~~l~p~l~~l~~~~~~~~~-~~i~~~~p~ 200 (236)
T TIGR00862 122 DNLEKGLLKALKKLDDYLNSPLPEEIDEDSAEDEKVSRRKFLDGDELTLADCNLLPKLHIVKVVAKKYRN-FDIPAEFTG 200 (236)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccccccccccccccCCCcccCCccchhhHHHHHHHHHHHHHHHHHhC-cCccccCch
Confidence 4456668899999999996 579999999999999999999776532000000 112479999
Q ss_pred HHHHHHHHHHh
Q psy13308 116 LVEHCTRIEQN 126 (166)
Q Consensus 116 L~~y~~Ri~~r 126 (166)
|.+|++||.++
T Consensus 201 l~~w~~~~~~~ 211 (236)
T TIGR00862 201 VWRYLSNAYAR 211 (236)
T ss_pred HHHHHHHHhcc
Confidence 99999999765
No 58
>PRK10357 putative glutathione S-transferase; Provisional
Probab=98.33 E-value=2e-06 Score=66.46 Aligned_cols=67 Identities=10% Similarity=0.058 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 55 QVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 55 ~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.....+.+.|+.||++|++++ ++|+++|.||++++..+..+..... . .....++|+|.+|.+||.++
T Consensus 125 ~~~~~l~~~l~~le~~L~~~~-l~Gd~~t~ADi~l~~~l~~~~~~~~-~---~~~~~~~p~l~~~~~~i~~r 191 (202)
T PRK10357 125 RQREKINRSLDALEGYLVDGT-LKTDTVNLATIAIACAVGYLNFRRV-A---PGWCVDRPHLVKLVENLFQR 191 (202)
T ss_pred HHHHHHHHHHHHHHHhhccCc-ccCCCcCHHHHHHHHHHHHHHhccc-C---cchhhcChHHHHHHHHHhcC
Confidence 345678899999999999888 9999999999988887764432211 0 11246799999999999885
No 59
>PLN02817 glutathione dehydrogenase (ascorbate)
Probab=98.32 E-value=1.4e-06 Score=71.09 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHHhhhcc-CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHH--HHHhhChhHHHHHHHHHHh
Q psy13308 56 VYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFA--STIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~--~~l~~~P~L~~y~~Ri~~r 126 (166)
..+.+.+.+..||++|++ ++|+.|+++|+||+++++++..+.... .... ...+.+|+|.+|.+||.++
T Consensus 172 ~~~~l~~~l~~LE~~L~~~g~yl~Gd~~SlADi~l~p~L~~l~~~~---~~~~~~~i~~~~P~L~~w~~ri~~r 242 (265)
T PLN02817 172 TEQALLDELTSFDDYIKENGPFINGEKISAADLSLGPKLYHLEIAL---GHYKNWSVPDSLPFVKSYMKNIFSM 242 (265)
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeCCCCCCHHHHHHHHHHHHHHHHH---HHhcCCCccccCHHHHHHHHHHhcc
Confidence 345677889999999974 699999999999999999887653210 0000 1236899999999999883
No 60
>PRK15113 glutathione S-transferase; Provisional
Probab=98.08 E-value=1.3e-05 Score=62.79 Aligned_cols=63 Identities=13% Similarity=-0.049 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhhhcc-CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
++..+.+.+.++.||++|++ ++|++|+ +|.||+++++.+..+..... .-.|+|.+|.+||.++
T Consensus 136 ~~~~~~~~~~l~~le~~L~~~~~~l~G~-~TlADi~l~~~l~~~~~~~~---------~~~p~l~~~~~r~~~r 199 (214)
T PRK15113 136 EAGKAAAEKLFAVAERLLAPGQPNLFGE-WCIADTDLALMLNRLVLHGD---------EVPERLADYATFQWQR 199 (214)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEeeCC-ccHHHHHHHHHHHHHHHcCC---------CCCHHHHHHHHHHhcC
Confidence 45677889999999999975 4799996 99999999988865543211 1128899999998764
No 61
>PLN02907 glutamate-tRNA ligase
Probab=98.01 E-value=9.2e-06 Score=74.66 Aligned_cols=63 Identities=17% Similarity=0.303 Sum_probs=50.5
Q ss_pred HHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHH--hcCCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 59 DVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAV--LTTPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 59 ~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~--~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
.+.+.++.||++|++++||+|+++|+||+++++.+... .+.. ...+..||||.+|.++|.++-
T Consensus 94 ~l~~~L~~LE~~L~~rtYLvGd~lTLADIaL~~~L~~~~~~~~~------~~~~~~yPnL~RW~erI~arP 158 (722)
T PLN02907 94 EFENACEYVDGYLASRTFLVGYSLTIADIAIWSGLAGSGQRWES------LRKSKKYQNLVRWFNSISAEY 158 (722)
T ss_pred HHHHHHHHHHHHhccCCeecCCCCCHHHHHHHHHHHhhhhhhhc------ccccccCHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999887644 1111 112468999999999999873
No 62
>KOG4420|consensus
Probab=97.98 E-value=2.2e-05 Score=63.69 Aligned_cols=70 Identities=14% Similarity=0.171 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHhhhcc----CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHh--hChhHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEK----NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIR--AYPNLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~----~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~--~~P~L~~y~~Ri~~r~ 127 (166)
.++...+...|+.+|+.|.. .+|++|+.+|.||+.+-+.++.+....+. .+... +.|||.+|.+|++.|.
T Consensus 204 kkild~l~~~Ld~VEteLe~r~~~~~wL~G~efslADVsLg~~LhRL~~Lg~e----~~yw~~gsrpnle~Yf~rvrrR~ 279 (325)
T KOG4420|consen 204 KKILDELAMVLDQVETELEKRKLCELWLCGCEFSLADVSLGATLHRLKFLGLE----KKYWEDGSRPNLESYFERVRRRF 279 (325)
T ss_pred HHHHHHHHHHHHHHHHHHhhccccceeeccccchHHHHHHHHHHHHHHHcccH----HHhcccCCCccHHHHHHHHHhhh
Confidence 45677778888899999876 68999999999999999999988776442 34454 7899999999999886
No 63
>KOG0867|consensus
Probab=97.92 E-value=3.9e-05 Score=61.09 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchH-HHHHhhChhHHHHHHHHHHhhCCCCc
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRF-ASTIRAYPNLVEHCTRIEQNYFKKDS 132 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l-~~~l~~~P~L~~y~~Ri~~r~~p~~~ 132 (166)
++....+++.++.+|+.|.++.|+.|+++|.||+.+.+-+..+... .. .....++|++.+|.++|.++ |.+.
T Consensus 132 ~~~~~~~~~~~~~~e~~l~~~~yl~g~~~tlADl~~~~~~~~~~~~-----~~~~~~~~~~p~v~~W~~~~~~~--P~~~ 204 (226)
T KOG0867|consen 132 KELEAKLRKALDNLERFLKTQVYLAGDQLTLADLSLASTLSQFQGK-----FATEKDFEKYPKVARWYERIQKR--PAYE 204 (226)
T ss_pred HHHHHHHHHHHHHHHHHHccCCcccCCcccHHHHHHhhHHHHHhHh-----hhhhhhhhhChHHHHHHHHHHhC--ccHH
Confidence 5678888999999999999999999999999999988888876311 11 23347999999999999998 6644
Q ss_pred h
Q psy13308 133 T 133 (166)
Q Consensus 133 ~ 133 (166)
.
T Consensus 205 e 205 (226)
T KOG0867|consen 205 E 205 (226)
T ss_pred H
Confidence 3
No 64
>COG0435 ECM4 Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=3.8e-05 Score=62.76 Aligned_cols=78 Identities=22% Similarity=0.255 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHh---cCCCCCchHHHHHhhChhHHHHHHHHHHhhCCC
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVL---TTPLPNNRFASTIRAYPNLVEHCTRIEQNYFKK 130 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~---~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~~p~ 130 (166)
++....+-+.|+.||+.|+++.|++||+.|.||+-+|..|..+- ...+.++ ..-+.+||||-.|..++=+ .|.
T Consensus 204 eea~~~lF~~Ld~lE~~L~~~ryl~Gd~lTEAD~RLftTlvRFD~VYvgHFKCN--~~rI~dypnL~~yLr~LYq--~pg 279 (324)
T COG0435 204 EEAVKKLFEALDKLEQILSERRYLTGDQLTEADIRLFTTLVRFDPVYVGHFKCN--LRRIRDYPNLWGYLRDLYQ--LPG 279 (324)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeeeccccchHhhhhhhheeEeecceEEeeeecc--cchhhcCchHHHHHHHHhc--Ccc
Confidence 44556667889999999999999999999999999999886541 1111111 2245679999999988766 455
Q ss_pred Cchhh
Q psy13308 131 DSTEA 135 (166)
Q Consensus 131 ~~~~~ 135 (166)
-....
T Consensus 280 ~~~T~ 284 (324)
T COG0435 280 FAETV 284 (324)
T ss_pred ccccc
Confidence 44443
No 65
>KOG1695|consensus
Probab=97.32 E-value=0.00054 Score=54.10 Aligned_cols=62 Identities=24% Similarity=0.342 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhhhc--cCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 59 DVDKCCQSLSERLE--KNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 59 ~~~~~L~~Le~~L~--~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
...+.+..+++.|. .+.|+.||+.|.||+.++..+..+... + . ...++.+|+|.+|.+||.+
T Consensus 127 a~~~~~~~~~~~L~~~~sgflvGd~lT~aDl~i~e~l~~l~~~-~-~---~~~~~~~P~L~a~~~kv~~ 190 (206)
T KOG1695|consen 127 AKPKYFKILEKILKKNKSGFLVGDKLTWADLVIAEHLDTLEEL-L-D---PSALDHFPKLKAFKERVSS 190 (206)
T ss_pred chHHHHHHHHHHHHhCCCCeeecCcccHHHHHHHHHHHHHHHh-c-C---chhhccChHHHHHHHHHhc
Confidence 33456667788887 457999999999999999999887762 1 0 2345678888888888764
No 66
>KOG3029|consensus
Probab=97.08 E-value=0.0024 Score=52.62 Aligned_cols=67 Identities=16% Similarity=0.179 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhhh-ccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 56 VYKDVDKCCQSLSERL-EKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L-~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
..+.+-++++.--+.| .+++|+.|++|+.+|..+||.+..+..+. .+. .+-....+..|.-||++..
T Consensus 289 ~Re~lydA~d~Wvaalgknr~flGG~kPnLaDLsvfGvl~sm~gc~----afk-d~~q~t~I~eW~~rmealV 356 (370)
T KOG3029|consen 289 EREHLYDAADQWVAALGKNRPFLGGKKPNLADLSVFGVLRSMEGCQ----AFK-DCLQNTSIGEWYYRMEALV 356 (370)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccCCCCCchhhhhhhhhhhHhhhhh----HHH-HHHhcchHHHHHHHHHHHH
Confidence 3444444444444455 57899999999999999999999998763 233 3446678999999998876
No 67
>KOG2903|consensus
Probab=97.01 E-value=0.0003 Score=57.19 Aligned_cols=73 Identities=23% Similarity=0.241 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHhhhccCC--ccCCCCCChhHHHHHHHHHHHhc---CCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLFGHIYAVLT---TPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~--yl~Gd~pT~aD~~vf~~l~~~~~---~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
++....+-+.|+.+|..|+++. |++|+++|.||+.+|..+..+-. ..+.++ ++.+.++||+|..|.++|=.++
T Consensus 202 e~~V~~lfe~LDr~E~vL~~~~~~f~~G~~LTeaDirLy~TiIRFD~VY~~hFKCn-~~~ir~~Yp~l~~~lk~iY~~~ 279 (319)
T KOG2903|consen 202 EEEVNQLFEALDRCEDVLGKNRKYFLCGDTLTEADIRLYTTIIRFDEVYVQHFKCN-KKTIRDEYPNLHNWLKNIYWNI 279 (319)
T ss_pred HHHHHHHHHHHHHHHHHHhcccceEeeccccchhheeeeeeEEeehhhhheeeecc-hhhhhccCcHHHHHHHHHHhhc
Confidence 3445566788899999999987 99999999999998876654311 111111 2333359999999999986654
No 68
>PF14834 GST_C_4: Glutathione S-transferase, C-terminal domain; PDB: 3BBY_A.
Probab=96.24 E-value=0.053 Score=38.98 Aligned_cols=45 Identities=16% Similarity=0.047 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHhhhcc-CCccCCCCCChhHHHHHHHHHHHhcC
Q psy13308 54 DQVYKDVDKCCQSLSERLEK-NNFFFKDKPTELDALLFGHIYAVLTT 99 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~-~~yl~Gd~pT~aD~~vf~~l~~~~~~ 99 (166)
++....+.+.+...+..|++ ++|+||+ .|+||+.+..++..+...
T Consensus 42 ~~a~~~a~kL~~~a~~ll~~g~~~LFGe-wsIAD~dlA~ml~Rl~~~ 87 (117)
T PF14834_consen 42 EAAQAAAQKLIAVAERLLADGGPNLFGE-WSIADADLALMLNRLVTY 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSTTSS---HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcccc-chHHHHHHHHHHHHHHHc
Confidence 55667778888888888876 6899995 999999777777777643
No 69
>PF04399 Glutaredoxin2_C: Glutaredoxin 2, C terminal domain; InterPro: IPR007494 Glutaredoxins [, , ], also known as thioltransferases (disulphide reductases, are small proteins of approximately one hundred amino-acid residues which utilise glutathione and NADPH as cofactors. Oxidized glutathione is regenerated by glutathione reductase. Together these components compose the glutathione system []. Glutaredoxin functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase. Like thioredoxin, which functions in a similar way, glutaredoxin possesses an active centre disulphide bond []. It exists in either a reduced or an oxidized form where the two cysteine residues are linked in an intramolecular disulphide bond. Glutaredoxin has been sequenced in a variety of species. On the basis of extensive sequence similarity, it has been proposed [] that Vaccinia virus protein O2L is most probably a glutaredoxin. Finally, it must be noted that Bacteriophage T4 thioredoxin seems also to be evolutionary related. In position 5 of the pattern T4 thioredoxin has Val instead of Pro. Unlike other glutaredoxins, glutaredoxin 2 (Grx2) cannot reduce ribonucleotide reductase. Grx2 has significantly higher catalytic activity in the reduction of mixed disulphides with glutathione (GSH) compared with other glutaredoxins. The active site residues (Cys9-Pro10-Tyr11-Cys12, in Escherichia coli Grx2, P39811 from SWISSPROT), which are found at the interface between the N- and C-terminal domains are identical to other glutaredoxins, but there is no other similarity between glutaredoxin 2 and other glutaredoxins. Grx2 is structurally similar to glutathione-S-transferases (GST), but there is no obvious sequence similarity. The inter-domain contacts are mainly hydrophobic, suggesting that the two domains are unlikely to be stable on their own. Both domains are needed for correct folding and activity of Grx2. It is thought that the primary function of Grx2 is to catalyse reversible glutathionylation of proteins with GSH in cellular redox regulation including the response to oxidative stress. The N-terminal domain is IPR004045 from INTERPRO.; PDB: 1G7O_A 3IR4_A.
Probab=96.21 E-value=0.037 Score=40.75 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHhh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQNY 127 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r~ 127 (166)
++..++++..|..|+..+......-| ++|.-|+.+|+.|..+...+ -+.=-|++.+|+++|.++-
T Consensus 58 ~~~i~~l~~~L~~Le~ll~~~~~~n~-~LS~dDi~lFp~LR~Ltivk--------gi~~P~~V~~Y~~~~s~~t 122 (132)
T PF04399_consen 58 PELIAELNADLEELEPLLASPNAVNG-ELSIDDIILFPILRSLTIVK--------GIQWPPKVRAYMDRMSKAT 122 (132)
T ss_dssp HHHHHHHHHHHHHHHHH-SCTTBTTS-S--HHHHHHHHHHHHHCTCT--------TS---HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccccCC-CCCHHHHHHHHHHhhhhhcc--------CCcCCHHHHHHHHHHHHHc
Confidence 67888999999999999986655555 89999999999999875542 1222389999999998763
No 70
>KOG0868|consensus
Probab=95.76 E-value=0.024 Score=44.00 Aligned_cols=63 Identities=16% Similarity=0.229 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHhhhcc--CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 56 VYKDVDKCCQSLSERLEK--NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~--~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
+.....+.+.+||+.|.. +.|..||+.|+||+++.+.+...-.. ...+..||-+.+.-+++.+
T Consensus 133 ~q~~ItkGF~ALEklL~~~aGkycvGDevtiADl~L~pqv~nA~rf-------~vdl~PYPti~ri~e~l~e 197 (217)
T KOG0868|consen 133 AQHFITKGFTALEKLLKSHAGKYCVGDEVTIADLCLPPQVYNANRF-------HVDLTPYPTITRINEELAE 197 (217)
T ss_pred HHHHHHHhHHHHHHHHHHccCCcccCceeehhhhccchhhhhhhhc-------cccCCcCchHHHHHHHHHh
Confidence 456668899999999965 68999999999999999998866332 3345688888777766654
No 71
>cd03199 GST_C_GRX2 GST_C family, Glutaredoxin 2 (GRX2) subfamily; composed of bacterial proteins similar to E. coli GRX2, an atypical GRX with a molecular mass of about 24kD (most GRXs range from 9-12kD). GRX2 adopts a GST fold containing an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain. It contains a redox active CXXC motif located in the N-terminal domain, but is not able to reduce ribonucleotide reductase like other GRXs. However, it catalyzes GSH-dependent protein disulfide reduction of other substrates efficiently. GRX2 is thought to function primarily in catalyzing the reversible glutathionylation of proteins in cellular redox regulation including stress responses.
Probab=94.95 E-value=0.15 Score=37.30 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~r 126 (166)
.++.++++..|..|+..+..... .+..+|.-|+.+|+.|..+...+ -+.=-|++.+|+++|.++
T Consensus 59 ~~~i~~l~~~L~~l~~ll~~~~~-~n~~ls~DDi~lFp~LR~Lt~vk--------gi~~P~~V~~Y~~~~s~~ 122 (128)
T cd03199 59 PQYIAALNALLEELDPLILSSEA-VNGQLSTDDIILFPILRNLTLVK--------GLVFPPKVKAYLERMSAL 122 (128)
T ss_pred HHHHHHHHHHHHHHHHHHcCccc-cCCcCCHHHHHHHHHHhhhhhhc--------CCCCCHHHHHHHHHHHHH
Confidence 47788999999999999954444 45589999999999998764321 122238899999999875
No 72
>KOG1422|consensus
Probab=94.48 E-value=0.099 Score=41.37 Aligned_cols=67 Identities=16% Similarity=0.160 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhhhcc---CCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHH-H-hhChhHHHHHHHHHH
Q psy13308 56 VYKDVDKCCQSLSERLEK---NNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAST-I-RAYPNLVEHCTRIEQ 125 (166)
Q Consensus 56 ~~~~~~~~L~~Le~~L~~---~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~-l-~~~P~L~~y~~Ri~~ 125 (166)
....+-+.|..|+..|.. ++|+-||+.|.+||.+.+=|+.+-.+- ...+.. + ++.+.+.+|++.+-+
T Consensus 124 ~e~~Ll~~L~~Ld~yL~sp~~~~Fl~Gd~lt~aDcsLlPKL~~i~va~---k~yk~~~IP~~lt~V~rYl~~~ya 195 (221)
T KOG1422|consen 124 LEKALLKELEKLDDYLKSPSRRKFLDGDKLTLADCSLLPKLHHIKVAA---KHYKNFEIPASLTGVWRYLKNAYA 195 (221)
T ss_pred HHHHHHHHHHHHHHHhcCccCCccccCCeeeeehhhhchhHHHHHHHH---HHhcCCCCchhhhHHHHHHHHHHh
Confidence 344566778999999974 799999999999999999887664320 000100 1 466788888877644
No 73
>KOG1147|consensus
Probab=66.06 E-value=6 Score=35.88 Aligned_cols=37 Identities=14% Similarity=0.266 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHH
Q psy13308 59 DVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYA 95 (166)
Q Consensus 59 ~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~ 95 (166)
++...+..|+..|.-..||.|.+.|+||+++|+.+..
T Consensus 92 ~~s~~~~~ld~~l~~~t~lvg~sls~Ad~aiw~~l~~ 128 (712)
T KOG1147|consen 92 EISSSLSELDKFLVLRTFLVGNSLSIADFAIWGALHS 128 (712)
T ss_pred HHHHHHHHHHhhhhHHHHhhccchhHHHHHHHHHHhc
Confidence 3455666777777778999999999999999999985
No 74
>COG2999 GrxB Glutaredoxin 2 [Posttranslational modification, protein turnover, chaperones]
Probab=64.57 E-value=22 Score=27.79 Aligned_cols=63 Identities=13% Similarity=0.156 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCccCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhC-hhHHHHHHHHHHh
Q psy13308 54 DQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAY-PNLVEHCTRIEQN 126 (166)
Q Consensus 54 ~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~-P~L~~y~~Ri~~r 126 (166)
+++..+..++|++|+..+....=+-| ..+.=|+.+|+.+..+...+ -+ ++ .++..|..+|.++
T Consensus 141 ~~~~~~i~~dl~~l~~Li~~~s~~n~-~l~~ddi~vFplLRnlt~v~--------gi-~wps~v~dy~~~msek 204 (215)
T COG2999 141 AQYLKRIQADLRALDKLIVGPSAVNG-ELSEDDILVFPLLRNLTLVA--------GI-QWPSRVADYRDNMSEK 204 (215)
T ss_pred HHHHHHHHHHHHHHHHHhcCcchhcc-ccchhhhhhhHHhccceecc--------cC-CCcHHHHHHHHHHHHh
Confidence 67888999999999999866543333 68999999999998664432 11 33 4688888888764
No 75
>KOG1668|consensus
Probab=45.81 E-value=22 Score=28.60 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=30.8
Q ss_pred HHHHHHHHhhhccCCccCCCCCChhHHHHHHHHH
Q psy13308 61 DKCCQSLSERLEKNNFFFKDKPTELDALLFGHIY 94 (166)
Q Consensus 61 ~~~L~~Le~~L~~~~yl~Gd~pT~aD~~vf~~l~ 94 (166)
.+.+..++..|.++.|.-|..++-.|+.+|+-+.
T Consensus 10 ~~glk~l~~sLA~ks~~~g~~~s~edv~vf~al~ 43 (231)
T KOG1668|consen 10 PAGLKKLNKSLAEKSYIEGYQLSKEDVVVFAALG 43 (231)
T ss_pred hhhhhhhhHhhhcccCCCCCCcccccceeehhcc
Confidence 5678899999999999999999999999988875
No 76
>cd08797 Death_NFkB1_p105 Death domain of the Nuclear Factor-KappaB1 precursor protein p105. Death Domain (DD) of the Nuclear Factor-KappaB1 (NF-kB1) precursor protein p105. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). NF-kB1 (or p50) is produced from the processing of the precursor protein p105, which contains ANK repeats and a C-terminal DD in addition to the RHD. It is regulated by the classical (or canonical) NF-kB pathway. In the cytosol, p50 forms an inactive complex with RelA (or p65) and the Inhibitor of NF-kB (IkB). Activation is triggered by the phosphorylation and degradation of IkB, resulting in the active DNA-binding p50-RelA dimer to migrate to the nucleus. The classical pathway regulates the majority of genes activated by NF-kB including those encod
Probab=43.07 E-value=7.8 Score=25.80 Aligned_cols=28 Identities=18% Similarity=0.366 Sum_probs=21.8
Q ss_pred hhhhhhhccccchhhhhhccccccccccccC
Q psy13308 135 AKYFLWLTNLSSVVVRQWTSDLEVGGSISQL 165 (166)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (166)
.++....+||+..++..|.- -||++.+|
T Consensus 31 ~~~f~~~pSPt~~LLd~~E~---~~G~l~~L 58 (76)
T cd08797 31 NNAFRLSPSPSKTLLDNYEV---SGGTVREL 58 (76)
T ss_pred HHHHhCCCCcHHHHHHHHhc---CCCCHHHH
Confidence 34566789999999999987 57777654
No 77
>cd08798 Death_NFkB2_p100 Death domain of the Nuclear Factor-KappaB2 precursor protein p100. Death Domain (DD) of the Nuclear Factor-KappaB2 (NF-kB2) precursor protein p100. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). NF-kB2 (or p52) is produced from the processing of the precursor protein p100, which contains ANK repeats and a C-terminal DD in addition to the RHD. It is regulated by the non-canonical NF-kB pathway. The p100 precursor is cytosolic and interacts with RelB. Upon phosphorylation by IKKalpha, p100 is processed to its 52kDa active, DNA binding form and the p52/RelB complex is translocated into the nucleus. The non-canonical pathway plays a role in adaptive immunity and lymphorganogenesis. In general, DDs are protein-protein interaction domains found i
Probab=34.12 E-value=13 Score=24.71 Aligned_cols=27 Identities=15% Similarity=0.290 Sum_probs=20.5
Q ss_pred hhhhhhccccchhhhhhccccccccccccC
Q psy13308 136 KYFLWLTNLSSVVVRQWTSDLEVGGSISQL 165 (166)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (166)
++....+||+..+++.|.-. ||.+.+|
T Consensus 32 ~~f~~~~SPt~~LLd~yE~~---~G~l~~L 58 (76)
T cd08798 32 DTYKPTQSPPGSLLRSYELA---GGPLQGL 58 (76)
T ss_pred HHHhCCCCchHHHHHHhhcc---CCCHHHH
Confidence 34455679999999999875 7877654
No 78
>PF05003 DUF668: Protein of unknown function (DUF668); InterPro: IPR007700 This is a family of uncharacterised plant proteins of unknown function.
Probab=29.53 E-value=1.3e+02 Score=20.52 Aligned_cols=40 Identities=13% Similarity=0.057 Sum_probs=28.7
Q ss_pred HHhHHHHHHHHHHHhhhcccC----CCCHHHHHHHHHHHHHHHH
Q psy13308 29 IYLTYKKKLTVQHRLKTLKWL----EKSLDQVYKDVDKCCQSLS 68 (166)
Q Consensus 29 ~~l~~~~r~~~~~~l~~~G~g----~~~~~~~~~~~~~~L~~Le 68 (166)
..||..+|...+.+|+..... ....+++.+.+++.|+-|.
T Consensus 38 ~mLP~~ir~aLr~kL~~~~~~~~~d~~~a~~~~~~m~kiL~WL~ 81 (89)
T PF05003_consen 38 QMLPPSIRSALRSKLRSYWKKAIYDELLAAEWKDAMEKILEWLA 81 (89)
T ss_pred hhCcHHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHH
Confidence 567888888888888754433 3445778888888887765
No 79
>PF15565 Imm16: Immunity protein 16
Probab=26.86 E-value=2.3e+02 Score=19.95 Aligned_cols=80 Identities=11% Similarity=0.301 Sum_probs=51.3
Q ss_pred CHHHHHHHHHHHHHHHHhhhccC---Cc--cCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhH-----HHHHH
Q psy13308 52 SLDQVYKDVDKCCQSLSERLEKN---NF--FFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNL-----VEHCT 121 (166)
Q Consensus 52 ~~~~~~~~~~~~L~~Le~~L~~~---~y--l~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L-----~~y~~ 121 (166)
+++++ +.+...|..+....... .. .|.|. +--++ +|+.++.+-.... ...+..++...|++ ..|.+
T Consensus 11 ~e~e~-e~Fe~~L~~l~~~~d~~~I~~L~~~F~D~-~d~eV-mf~lvh~lE~~~~-~~~l~~l~~~~p~m~~~A~keWa~ 86 (106)
T PF15565_consen 11 NEEEC-EEFEEALNELAKYPDNDVIDDLCLIFDDE-TDHEV-MFSLVHFLEHFDM-EEYLPALAEAIPQMMINAPKEWAK 86 (106)
T ss_pred CHHHH-HHHHHHHHHHHhcCCHhHHHHHHHHhcCc-cchHH-HHHHHHHHHHccH-HHHHHHHHHHHHHHHHhhHHHHHH
Confidence 44554 78888888887775442 11 25555 33355 8888888766532 23455566677877 58888
Q ss_pred HHHHhhCCCCchhh
Q psy13308 122 RIEQNYFKKDSTEA 135 (166)
Q Consensus 122 Ri~~r~~p~~~~~~ 135 (166)
++.-|.+-+.....
T Consensus 87 il~~RilNs~~~~~ 100 (106)
T PF15565_consen 87 ILHYRILNSDDARK 100 (106)
T ss_pred HHHHHHHcChHHHH
Confidence 99888876654433
No 80
>PHA00666 putative protease
Probab=26.43 E-value=1.7e+02 Score=23.57 Aligned_cols=47 Identities=9% Similarity=0.149 Sum_probs=27.0
Q ss_pred HHHHHhhhcccCCCCHHHHHHHHHHHHHHHHhhhccCCccCC---CCCChhHHHHHH
Q psy13308 38 TVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFK---DKPTELDALLFG 91 (166)
Q Consensus 38 ~~~~~l~~~G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~G---d~pT~aD~~vf~ 91 (166)
++++.|...|+|.| .+ +.+.+..+-..|++..++.| .+.|.+|+ +|+
T Consensus 181 eL~~~L~esGlGNH--Pe----vVr~f~~VGkal~ED~~V~Gg~~~~~s~a~~-ly~ 230 (233)
T PHA00666 181 ELKEYLNKTGLGNH--PE----LVKVFYKAGKAMSEDRLVTGGNEPKQSDARR-LYA 230 (233)
T ss_pred HHHHHHHhccCCCC--HH----HHHHHHHHHHHhcccccccCCCCCCCchHHH-hhc
Confidence 44556666777777 32 33444555555555555544 37888887 543
No 81
>KOG4107|consensus
Probab=24.47 E-value=2.6e+02 Score=19.81 Aligned_cols=63 Identities=14% Similarity=0.081 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhhhccCCccCCC-CCChhHHH--------HHHHHHHHhcCCCCCchHHHHHh-hChhHHHHHHHH
Q psy13308 57 YKDVDKCCQSLSERLEKNNFFFKD-KPTELDAL--------LFGHIYAVLTTPLPNNRFASTIR-AYPNLVEHCTRI 123 (166)
Q Consensus 57 ~~~~~~~L~~Le~~L~~~~yl~Gd-~pT~aD~~--------vf~~l~~~~~~~~~~~~l~~~l~-~~P~L~~y~~Ri 123 (166)
.+.+.....++|.+ |++.|=-|+ +++..||. +...+.+++-.. +..+ .++. +--.|.+|.++=
T Consensus 46 aAiasniWAAyer~-gn~af~e~~Lkf~lldcenG~vaiT~VA~~LLc~yAk~--tvgl-GmlkaKa~tLa~YLE~P 118 (125)
T KOG4107|consen 46 AAIASNIWAAYERR-GNQAFNEDDLKFTLLDCENGVVAITLVARMLLCVYAKK--TVGL-GMLKAKAHTLAAYLEQP 118 (125)
T ss_pred HHHHHHHHHHHHHh-ccccccccCceeeeeeecCCeeeHHHHHHHHHHHhhhc--ccch-HHHHHHHHHHHHHHHhH
Confidence 34445667777766 777777777 88888873 333344443221 1122 3443 667788888873
No 82
>COG3394 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.33 E-value=1.8e+02 Score=23.89 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=25.3
Q ss_pred ccCCCCHHHHHHHHHHHHHHHHhhhccCCccCCCCCChhHH
Q psy13308 47 KWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDA 87 (166)
Q Consensus 47 G~g~~~~~~~~~~~~~~L~~Le~~L~~~~yl~Gd~pT~aD~ 87 (166)
+.+..+.++|.+++...++.+-+. +|..||-.|.
T Consensus 93 ~~~~~~~eeV~~El~aQ~erF~~~-------~G~~PshlDs 126 (257)
T COG3394 93 LEGALDLEEVTAELIAQYERFVEL-------FGRTPSHLDS 126 (257)
T ss_pred cccCCCHHHHHHHHHHHHHHHHHH-------hCCCCccccc
Confidence 346677899999998888888776 4666666665
No 83
>PLN00108 unknown protein; Provisional
Probab=21.74 E-value=66 Score=26.37 Aligned_cols=58 Identities=10% Similarity=0.202 Sum_probs=33.8
Q ss_pred HHHHHHHHHHH----hhhccCCc--------cCCCCCChhHHHHHHHHHHHhcCCCCCchHHHHHhhChhHHHHHHHHHH
Q psy13308 58 KDVDKCCQSLS----ERLEKNNF--------FFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQ 125 (166)
Q Consensus 58 ~~~~~~L~~Le----~~L~~~~y--------l~Gd~pT~aD~~vf~~l~~~~~~~~~~~~l~~~l~~~P~L~~y~~Ri~~ 125 (166)
+++.+.|+.++ ..++++|. .|++.|+.+++ +|+-+. .....+.|..+++++.+
T Consensus 108 ~kA~~~L~s~~~~i~~~l~~~pl~I~lkGL~~Mnddps~~~V-LYA~Ve--------------~~~~~~rLq~~ad~i~~ 172 (257)
T PLN00108 108 VKAQNILKSICSNVRQALKDRPVFIRLRGLDCMNGSLDKTRV-LYAPVE--------------EVGHEGRLLNACHVIID 172 (257)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCeEEEEEeehhcCCCcccceE-EEEecc--------------ccCchhHHHHHHHHHHH
Confidence 44444444443 34445554 36777888887 443221 12345778888888877
Q ss_pred hhCCC
Q psy13308 126 NYFKK 130 (166)
Q Consensus 126 r~~p~ 130 (166)
.|-..
T Consensus 173 ~F~~a 177 (257)
T PLN00108 173 AFENA 177 (257)
T ss_pred HHHHc
Confidence 77553
No 84
>cd08801 Death_UNC5D Death domain found in Uncoordinated-5D. Death Domain (DD) found in Uncoordinated-5D (UNC5D). UNC5D is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=20.17 E-value=48 Score=23.00 Aligned_cols=29 Identities=24% Similarity=0.527 Sum_probs=22.0
Q ss_pred hhhhhccccchhhhhhccccccccccccC
Q psy13308 137 YFLWLTNLSSVVVRQWTSDLEVGGSISQL 165 (166)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (166)
|.-.-.||.++++.+|.-.-.-+|.+.+|
T Consensus 38 yFatk~SPT~viLdLWEa~~~~~g~L~~L 66 (98)
T cd08801 38 YFATQSSPSAVILSLWEARHQHDGDLDSL 66 (98)
T ss_pred HHhcCCChHHHHHHHHHHhcCCCCCHHHH
Confidence 33345799999999998877777776654
No 85
>PF08369 PCP_red: Proto-chlorophyllide reductase 57 kD subunit; InterPro: IPR013580 This domain is found in bacteria and plant chloroplast proteins. It often appears at the C-terminal of nitrogenase component 1 type oxidoreductases (IPR000510 from INTERPRO) and sometimes independently in bacterial proteins such as the proto-chlorophyllide reductase subunit B of the cyanobacterium Synechocystis. This domain is also associated with chlorophyllide reductase subunit Z, converts chlorophylls (Chl) into bacteriochlorophylls (BChl) by reducing ring B of the tetrapyrrole.; GO: 0016491 oxidoreductase activity, 0015979 photosynthesis, 0015995 chlorophyll biosynthetic process, 0055114 oxidation-reduction process; PDB: 2KRU_A 2L09_A.
Probab=20.08 E-value=2e+02 Score=16.80 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=21.9
Q ss_pred hccCChhhHHHhHHHHHHHHHHHhhhcccCCCCHHHHH
Q psy13308 20 GAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVY 57 (166)
Q Consensus 20 ~~~~P~pl~~~l~~~~r~~~~~~l~~~G~g~~~~~~~~ 57 (166)
...+|+.+| .++|+++-+.....|....+.+.+.
T Consensus 9 L~~iP~fvR----~~~r~~~E~~Ar~~G~~~IT~e~v~ 42 (45)
T PF08369_consen 9 LDRIPFFVR----KKLRDAAEKYARERGYDEITVEVVD 42 (45)
T ss_dssp HCTS-HHHH----HHHHHHHHHHHHHCT-SEE-HHHHH
T ss_pred HHHCCHHHH----HHHHHHHHHHHHHcCCCeECHHHHH
Confidence 455677776 6778888888888888777766543
Done!