RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13308
(166 letters)
>d2gsta1 a.45.1.1 (A:85-217) Class mu GST {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 133
Score = 36.1 bits (83), Expect = 4e-04
Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Query: 50 EKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAST 109
EK + K + + + SE L K +F DK T +D L + +
Sbjct: 36 EKQKPEFLKTIPEKMKLYSEFLGKRPWFAGDKVTYVDFLAYDILDQYHIF------EPKC 89
Query: 110 IRAYPNLVEHCTRIEQN 126
+ A+PNL + R E
Sbjct: 90 LDAFPNLKDFLARFEGL 106
>d2fhea1 a.45.1.1 (A:81-216) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 136
Score = 34.2 bits (78), Expect = 0.002
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 42 RLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPL 101
R+ E+ + KD+ + S+ L KN + + +D +++ + A+
Sbjct: 27 RISYQPKFEQLKEGYLKDLPTTMKMWSDFLGKNPYLRGTSVSHVDFMVYEALDAIR---- 82
Query: 102 PNNRFASTIRAYPNLVEHCTRIEQN-----YFKKD 131
+ +PNL + +RIE Y + +
Sbjct: 83 --YLEPHCLDHFPNLQQFMSRIEALPSIKAYMESN 115
>d2c4ja1 a.45.1.1 (A:86-218) Class mu GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 133
Score = 33.5 bits (76), Expect = 0.005
Identities = 19/87 (21%), Positives = 34/87 (39%), Gaps = 11/87 (12%)
Query: 50 EKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHIYAVLTTPLPNNRFAST 109
EK + + + + + S+ L K +F DK T +D + + + S
Sbjct: 36 EKLKPEYLQALPEMLKLYSQFLGKQPWFLGDKITFVDFIAYDVLERNQ------VFEPSC 89
Query: 110 IRAYPNLVEHCTRIEQN-----YFKKD 131
+ A+PNL + +R E Y K
Sbjct: 90 LDAFPNLKDFISRFEGLEKISAYMKSS 116
>d1tu7a1 a.45.1.1 (A:78-208) Class pi GST {Onchocerca volvulus
[TaxId: 6282]}
Length = 131
Score = 32.3 bits (73), Expect = 0.009
Identities = 20/119 (16%), Positives = 27/119 (22%), Gaps = 25/119 (21%)
Query: 19 HGAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFF 78
H Y T K L EK L R N
Sbjct: 21 HVKYTRMIYMAYETEKDPYIKSILPGELAKFEKLLAT--------------RGNGRNLIL 66
Query: 79 KDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN-----YFKKDS 132
DK + D LF + + +P L R++ Y +K
Sbjct: 67 GDKISYADYALFEELDVHQ------ILDPHCLDKFPLLKVFHQRMKDRPKLKEYCEKRD 119
>d1m0ua1 a.45.1.1 (A:123-249) Class sigma GST {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 127
Score = 30.8 bits (69), Expect = 0.033
Identities = 14/106 (13%), Positives = 27/106 (25%), Gaps = 18/106 (16%)
Query: 21 AVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKD 80
+A K+K V + + + + L+Q K + +
Sbjct: 25 KIAVVSYEPEDEIKEKKLVTLNAEVIPFYLEKLEQTVK-------------DNDGHLALG 71
Query: 81 KPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126
K T D G + + + YP L +
Sbjct: 72 KLTWADVYFAGITDYMNYMVKRD-----LLEPYPALRGVVDAVNAL 112
>d1okta1 a.45.1.1 (A:86-211) Pf GST {Malarial parasite (Plasmodium
falciparum) [TaxId: 5833]}
Length = 126
Score = 30.4 bits (68), Expect = 0.047
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 16/93 (17%)
Query: 34 KKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNNFFFKDKPTELDALLFGHI 93
+ + K + EK L + + + +F + T D +F
Sbjct: 35 ETTFLNEDLPKWSGYFEKLLKK----------NHTNNNNDKYYFVGNNLTYADLAVFNLY 84
Query: 94 YAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126
+ ++ S+++ +P L H I
Sbjct: 85 DDIE------TKYPSSLKNFPLLKAHNEFISNL 111
>d1tw9a1 a.45.1.1 (A:78-206) Class sigma GST {Heligmosomoides
polygyrus [TaxId: 6339]}
Length = 129
Score = 29.3 bits (65), Expect = 0.12
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 54 DQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIR 111
D + K +++ L+KN+ F DK + +D L+ H+ + NR I
Sbjct: 46 DVLLPARTKFLGFITKFLKKNSSGFLVGDKISWVDLLVAEHVADMT------NRVPEYIE 99
Query: 112 AYPNLVEHCTRIEQN 126
+P + H RI+Q
Sbjct: 100 GFPEVKAHMERIQQT 114
>d1oe8a1 a.45.1.1 (A:85-207) Class alpha GST {Blood fluke
(Schistosoma haematobium) [TaxId: 6185]}
Length = 123
Score = 28.8 bits (64), Expect = 0.17
Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 7/96 (7%)
Query: 33 YKKKLTVQHRLKTLKWLEKSLDQVYKDVDKCCQSLSERLEKNN--FFFKDKPTELDALLF 90
+ + + + + + V + E L+ + DK T D +L
Sbjct: 21 LEHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLI 80
Query: 91 GHIYAVLTTPLPNNRFASTIRAYPNLVEHCTRIEQN 126
I V YP + +H + +
Sbjct: 81 AVIDHVTDLDKEFLTG-----KYPEIHKHRENLLAS 111
>d1z9ha1 a.45.1.1 (A:213-373) Microsomal prostaglandin E synthase-2
{Crab-eating macaque (Macaca fascicularis) [TaxId:
9541]}
Length = 161
Score = 26.7 bits (59), Expect = 1.2
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 22/127 (17%)
Query: 1 NYITWCDPTTYREVTKVRH-GAVAPWPLNIYLTYKKKLTVQHRLKTLKWLEKSLDQVYKD 59
+YI E ++ GA A + + K+L +HRL+ D V +D
Sbjct: 50 DYIVREGKFGAVEGAVAKYMGAAAMYLI------SKRLKSRHRLQ---------DNVRED 94
Query: 60 VDKCCQSLSERLEKNN-FFFKDKPTELDALLFGHIYAVLTTPLPNNRFASTIRAYPNLVE 118
+ + + K+ F KP D ++G + + + + ++
Sbjct: 95 LYEAADKWVAAVGKDRPFMGGQKPNLADLAVYGVLRVMEGLD-----AFDDLMQHTHIQP 149
Query: 119 HCTRIEQ 125
R+E+
Sbjct: 150 WYLRVER 156
>d1k8ta_ e.41.1.1 (A:) Adenylylcyclase toxin (the edema factor)
{Bacillus anthracis [TaxId: 1392]}
Length = 509
Score = 24.5 bits (53), Expect = 8.2
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 1 NYITWCDPTTYREVTKV 17
YI W DP T ++ +
Sbjct: 351 AYIEWTDPITKAKINTI 367
>d1dg9a_ c.44.1.1 (A:) Tyrosine phosphatase {Cow (Bos taurus)
[TaxId: 9913]}
Length = 157
Score = 24.0 bits (51), Expect = 8.4
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 54 DQVYKDVDKCCQSLSERL 71
+ VY+ +CC++ E++
Sbjct: 139 ETVYQQCVRCCRAFLEKV 156
>d1uzxa_ d.20.1.2 (A:) Vacuolar protein sorting-associated
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 152
Score = 23.8 bits (51), Expect = 9.4
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 44 KTLKWLEKSLDQVYKDVDK 62
+ WL K + +Y D
Sbjct: 5 AVVNWLFKVIQPIYNDGRT 23
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.421
Gapped
Lambda K H
0.267 0.0565 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 629,343
Number of extensions: 26480
Number of successful extensions: 70
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 18
Length of query: 166
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 87
Effective length of database: 1,322,926
Effective search space: 115094562
Effective search space used: 115094562
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.0 bits)