Query psy13309
Match_columns 1568
No_of_seqs 484 out of 674
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 16:12:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2243|consensus 100.0 0E+00 0E+00 3598.0 64.6 1497 1-1566 130-1811(5019)
2 KOG3533|consensus 100.0 9.1E-96 2E-100 881.7 22.8 497 1-534 136-694 (2706)
3 KOG2243|consensus 100.0 3.8E-68 8.2E-73 631.6 6.5 447 412-1013 500-981 (5019)
4 PF01365 RYDR_ITPR: RIH domain 100.0 7.3E-32 1.6E-36 298.8 8.2 205 331-539 1-207 (207)
5 PF02026 RyR: RyR domain; Int 100.0 9.4E-31 2E-35 253.9 7.1 93 887-979 1-93 (94)
6 PF02026 RyR: RyR domain; Int 99.9 8.5E-24 1.8E-28 205.5 7.0 93 754-866 1-93 (94)
7 PF08709 Ins145_P3_rec: Inosit 99.8 7.5E-21 1.6E-25 212.0 7.8 90 1-91 114-211 (214)
8 KOG2626|consensus 99.8 7E-20 1.5E-24 217.1 9.4 128 996-1137 316-506 (544)
9 PF02815 MIR: MIR domain; Int 99.8 3.3E-19 7.2E-24 195.4 13.0 167 103-277 1-178 (190)
10 KOG0349|consensus 99.7 5.7E-18 1.2E-22 194.8 10.1 146 1007-1167 123-290 (725)
11 KOG0349|consensus 99.7 1.2E-16 2.6E-21 184.1 12.8 127 572-721 129-261 (725)
12 PF00622 SPRY: SPRY domain; I 99.6 1.8E-15 3.9E-20 153.1 11.1 103 1012-1120 1-124 (124)
13 smart00449 SPRY Domain in SPla 99.6 4.5E-15 9.7E-20 150.4 11.2 102 1012-1118 1-121 (122)
14 PF00622 SPRY: SPRY domain; I 99.2 8.6E-11 1.9E-15 119.0 9.4 101 596-702 19-123 (124)
15 smart00449 SPRY Domain in SPla 99.1 4E-10 8.6E-15 114.3 9.8 88 609-701 30-121 (122)
16 KOG3533|consensus 98.5 6E-07 1.3E-11 114.2 13.5 163 329-525 1201-1365(2706)
17 KOG4030|consensus 98.5 5.4E-07 1.2E-11 93.0 10.3 118 1007-1139 58-191 (197)
18 KOG2626|consensus 98.3 1.2E-06 2.6E-11 106.0 7.4 92 611-710 362-499 (544)
19 PF01365 RYDR_ITPR: RIH domain 98.0 1.5E-06 3.3E-11 97.1 0.9 120 457-596 83-206 (207)
20 KOG4367|consensus 97.9 4.4E-05 9.5E-10 89.5 9.7 107 1007-1120 568-696 (699)
21 KOG1477|consensus 97.4 0.00021 4.6E-09 88.7 6.6 111 1004-1120 70-205 (469)
22 KOG3359|consensus 97.3 0.0017 3.6E-08 82.9 12.2 137 44-187 312-469 (723)
23 KOG2242|consensus 97.2 0.00084 1.8E-08 85.0 9.6 117 1007-1125 374-514 (558)
24 KOG3953|consensus 97.0 0.0015 3.3E-08 72.8 7.2 115 572-692 70-188 (242)
25 KOG4367|consensus 96.7 0.0041 8.9E-08 73.6 7.8 222 454-700 441-693 (699)
26 KOG3358|consensus 96.5 0.0044 9.6E-08 66.3 6.0 132 102-253 23-165 (211)
27 KOG3358|consensus 96.4 0.013 2.8E-07 62.8 9.0 41 24-64 65-106 (211)
28 KOG3953|consensus 96.3 0.0082 1.8E-07 67.2 7.0 97 1007-1109 63-188 (242)
29 KOG4030|consensus 96.2 0.011 2.4E-07 62.0 6.7 69 641-717 122-190 (197)
30 PF02815 MIR: MIR domain; Int 96.1 0.038 8.3E-07 61.2 11.1 42 24-65 43-84 (190)
31 PF08709 Ins145_P3_rec: Inosit 95.6 0.079 1.7E-06 60.1 11.0 133 109-253 5-181 (214)
32 smart00472 MIR Domain in ryano 95.6 0.0077 1.7E-07 53.5 2.3 27 162-188 1-27 (57)
33 COG1928 PMT1 Dolichyl-phosphat 95.2 0.064 1.4E-06 69.0 9.6 126 49-187 305-450 (699)
34 smart00472 MIR Domain in ryano 94.6 0.054 1.2E-06 48.1 4.7 45 43-87 1-56 (57)
35 KOG1477|consensus 93.4 0.042 9.1E-07 68.8 2.3 106 1049-1177 1-125 (469)
36 KOG2242|consensus 92.4 0.15 3.3E-06 65.2 5.3 154 543-710 349-516 (558)
37 KOG3359|consensus 88.7 2.7 5.8E-05 54.9 11.5 129 16-159 347-502 (723)
38 COG1928 PMT1 Dolichyl-phosphat 88.5 1.8 3.9E-05 56.3 9.8 131 113-252 305-448 (699)
39 PF04601 DUF569: Protein of un 74.0 23 0.00051 38.0 10.0 63 113-188 7-70 (142)
40 cd00058 FGF Acidic and basic f 73.5 8.4 0.00018 40.3 6.5 59 135-206 11-74 (123)
41 cd00020 ARM Armadillo/beta-cat 71.6 6.6 0.00014 38.7 5.2 112 369-502 3-119 (120)
42 smart00442 FGF Acidic and basi 67.3 13 0.00028 39.1 6.3 37 145-191 30-66 (126)
43 PF00167 FGF: Fibroblast growt 61.2 20 0.00044 37.0 6.4 36 145-190 28-63 (122)
44 PF14200 RicinB_lectin_2: Rici 55.2 51 0.0011 32.8 7.9 75 148-253 2-79 (105)
45 KOG0946|consensus 41.7 2.4E+02 0.0052 38.0 12.4 100 329-448 168-267 (970)
46 cd00257 Fascin Fascin-like dom 34.6 1.7E+02 0.0037 29.7 8.1 47 148-208 33-79 (119)
47 PF01603 B56: Protein phosphat 33.6 1.4E+02 0.003 37.6 8.7 108 404-514 102-213 (409)
48 KOG1788|consensus 31.0 60 0.0013 44.0 4.8 69 414-487 663-731 (2799)
49 PF11302 DUF3104: Protein of u 25.4 1.9E+02 0.0041 28.1 5.9 56 109-168 5-62 (75)
50 PF13764 E3_UbLigase_R4: E3 ub 23.8 3.1E+02 0.0068 37.5 9.8 135 287-463 103-253 (802)
51 PF06268 Fascin: Fascin domain 22.1 1.2E+02 0.0025 30.9 4.3 53 145-209 21-73 (111)
52 PF08454 RIH_assoc: RyR and IP 20.7 1.8E+02 0.0039 30.0 5.3 82 274-383 22-106 (109)
53 PF08569 Mo25: Mo25-like; Int 20.3 3.9E+02 0.0084 32.9 8.9 152 329-487 38-216 (335)
54 KOG0946|consensus 20.0 1.1E+03 0.025 32.1 13.1 114 355-488 104-220 (970)
No 1
>KOG2243|consensus
Probab=100.00 E-value=0 Score=3598.02 Aligned_cols=1497 Identities=45% Similarity=0.836 Sum_probs=0.0
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccCCCCceEEEeeec
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTKENDLSVVNASFH 79 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~~~~EVnaS~~ 79 (1568)
||+|++|| |.+||+||+|+|+|+.++|+|||+|||++||||||||||+||++||+||+++||||+|..+|...|+|+|+
T Consensus 130 yl~clstsrs~tdklafdvgl~e~~tgeacwwtihpaskqrsegekvrigddlilvsvsserylhls~~ng~i~vdaaf~ 209 (5019)
T KOG2243|consen 130 YLCCLSTSRSQTDKLAFDVGLQEDATGEACWWTIHPASKQRSEGEKVRIGDDLILVSVSSERYLHLSVGNGNIHVDAAFM 209 (5019)
T ss_pred EEEEecccccccccceeeccccccCcCceeeEEecccccccccCceeeecCceEEEEecccceEEEEecCCceeecHHHH
Q ss_pred eeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCC------CCccCccccceeEEEEecCccccCCcceEEE
Q psy13309 80 VTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPG------LICPDRSKYLFHIVVYEGGSVMSQARSLWRL 153 (1568)
Q Consensus 80 ~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E------~~~~~~~~~~~~v~~~e~g~~~tsa~sLWeI 153 (1568)
||.|+|.|.|||++.+ +|||.| |||+||||++ .++.+..+.+++-++||.|.+.++|+||||+
T Consensus 210 qtlw~v~p~~sgs~~~------egylig-----g~v~rl~hghmdecltips~d~~d~q~r~i~ye~g~~~~~a~slwr~ 278 (5019)
T KOG2243|consen 210 QTLWNVAPICSGSEAA------EGYLIG-----GDVLRLFHGHMDECLTIPSGDHGDEQHRRIFYEAGAAGTHARSLWRL 278 (5019)
T ss_pred HHHhccCCCcCCchhh------hceeec-----chHHHHhccCccceeecCCCCccchhheeeeeeccccccchhhhhcc
Q ss_pred eecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeecc---ccccccccccccccccCCcc
Q psy13309 154 ELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQE---KDDQKIVLEDKDLEVIGAPI 230 (1568)
Q Consensus 154 E~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~---ke~~~~v~~~~di~~m~~~~ 230 (1568)
|++++.|+|++++|||+|||||+|||+||++.+|+++.++++.+++.++|+|.||.+ |++.+.. .++|+++||.++
T Consensus 279 e~lriawsgs~irwgq~frlrh~ttg~ylal~edk~lil~dk~kad~kstafsfraskelkekld~~-~kkdidgmg~~e 357 (5019)
T KOG2243|consen 279 EPLRIAWSGSHIRWGQAFRLRHLTTGHYLALMEDKGLILMDKAKADTKSTAFSFRASKELKEKLDSG-HKKDIDGMGTPE 357 (5019)
T ss_pred cceeEEeccCccccCcceeeeeccccceeeeeccCCceeechhhcccccceeEeeccHHHHHhhccc-cccccccCCCcc
Q ss_pred eeeCCcEEEEEEcccCeeeEeeecccccccCChhhhhceEeccccccccccceeccchHHHHHHHHHHHHHHHHHHHHHH
Q psy13309 231 IKYGDSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTARVIRKCSSLFTQFISG 310 (1568)
Q Consensus 231 I~~gdSyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~Fi~~ 310 (1568)
|+||||.|+|||++||+||+|++.+.+..++|+- .|++|+|.+|||||+.+++|++.+|++.+++|+++..+|++|+++
T Consensus 358 ikygdsvc~iqhi~sglw~tyka~d~ks~rlg~i-krk~ilh~eghmddgisl~r~q~ees~~ariir~t~~lf~~fi~g 436 (5019)
T KOG2243|consen 358 IKYGDSVCFIQHIASGLWLTYKAQDAKSSRLGPI-KRKAILHHEGHMDDGISLQRCQHEESQAARIIRNTTALFNQFIRG 436 (5019)
T ss_pred eecCceeeeeeeeccceeEEEeecccchhcccch-hhhhhhhccccccCccchhhhhhHHHHHHHHHHHHHHHHHHHHhh
Q ss_pred hhhhhcccccccccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccC
Q psy13309 311 LEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITS 390 (1568)
Q Consensus 311 L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~ 390 (1568)
|+.+++..+.+...-.++|++|.+.|+|||.||.+|+++++||+||++++.++||||||+|+|||.+|++|||+++.|++
T Consensus 437 ldals~~~kas~~~itlpie~v~~slqdli~yf~ppde~l~hedkqnklralknrqnlfkeegmi~lvl~cidrl~iy~s 516 (5019)
T KOG2243|consen 437 LDALSGKAKASAADITLPIEEVLLSLQDLIAYFHPPDEELEHEDKQNKLRALKNRQNLFKEEGMIALVLECIDRLHIYNS 516 (5019)
T ss_pred hhhhccccccccCCccccHHHHHHHHHHHHhhcCCchHHhhhhhhHhHHHHHhhHHhHhhhhhHHHHHHHHHHHHhhhhh
Q ss_pred ccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHH
Q psy13309 391 QGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEAL 470 (1568)
Q Consensus 391 ~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elL 470 (1568)
++||+.++++|++++|++|.+++|+||+++||||+.||++|+++ ||||+++++++++++| |+++|+|||.++||+|
T Consensus 517 ~ahfa~ia~~eag~awk~iln~ly~llaalirgnr~ncaqfs~~--ldwliskldrleassg--ilevlhcil~espeal 592 (5019)
T KOG2243|consen 517 AAHFADIAGEEAGEAWKEILNLLYELLAALIRGNRKNCAQFSGN--LDWLISKLDRLEASSG--ILEVLHCILTESPEAL 592 (5019)
T ss_pred HHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcchhhHHHhcCc--HhHHHHHHHHhhhccc--hHhHhhhhhcCCHHHH
Q ss_pred hhccHHHHHHHHHHHHHcCCCchhhhhhccccccCCcccccchHHHHhhhcCCCCcceeeecccceehhhhhhhhhCCCC
Q psy13309 471 NMMRDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDEHIKVIISLLEKHGRDP 550 (1568)
Q Consensus 471 n~I~e~hI~~fIsLL~k~~r~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~~~~lll~T~~v~hi~s~i~~lek~gr~p 550 (1568)
|.|.|.||+++|+||+|||||+|+||+|||||+|+|+||+.||++||++|||+||||+|||++|||+|| +|
T Consensus 593 nii~eghiksiislldkhgrnhkvldilcslc~c~gvavranq~licdnllp~r~lllqtrlin~vss~---------rp 663 (5019)
T KOG2243|consen 593 NIIAEGHIKSIISLLDKHGRNHKVLDILCSLCLCHGVAVRANQHLICDNLLPGRDLLLQTRLINDVSSI---------RP 663 (5019)
T ss_pred hHHhhhhHHHHHHHHHhcCCcccHHHHHHHHHhhcceeeeccCceeccccCCcchhhHHHHhhhhhhhc---------CC
Q ss_pred ccceeecceeecccccccccCCceeEeecCCCccccccceecc------------------cccccccCCCCcccccccc
Q psy13309 551 KVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDH------------------VASYVPYPGGGEKWGGNGV 612 (1568)
Q Consensus 551 ~vl~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~------------------~~~~~p~~~~g~~~gg~gv 612 (1568)
||| .|||++|+|+.+|||+| ++|| .+||+|+||+|+.|||+||
T Consensus 664 nif---------lgvaegsaqykkwy~el----------~id~~dpf~tae~thlrvgwass~gyap~pggge~wggngv 724 (5019)
T KOG2243|consen 664 NIF---------LGVAEGSAQYKKWYFEL----------IIDHTDPFLTAEATHLRVGWASSEGYAPCPGGGEEWGGNGV 724 (5019)
T ss_pred cee---------EeeccchHHHHHHHHHH----------hhhcCCcceecccceeeeeeeccCCCCCCCCCcccccCCCc
Q ss_pred ccCCccccccCCccccCCccccccCCCCCCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccCC
Q psy13309 613 GDDLYSFGFDGAHLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSK 692 (1568)
Q Consensus 613 Gdd~~S~gfDG~~~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~ 692 (1568)
|||+|||||||.|+|+|..++.+ .+..++.++..|||+|||||..|.|||++||+||+++|++||.||+|||++||+++
T Consensus 725 gddl~sygfdglhlwsg~i~r~v-as~nqhllrsddvisccldl~~psisfringqpvqgmfenfn~dglffpv~sfsag 803 (5019)
T KOG2243|consen 725 GDDLFSYGFDGLHLWSGCIARAV-ASPNQHLLRSDDVISCCLDLGAPSISFRINGQPVQGMFENFNIDGLFFPVMSFSAG 803 (5019)
T ss_pred cchhhhcCCCcchhhcccchhhh-cChhhhhhcccchhhhhhhcCCCceEEEECCccchhHHhcCCCcceeeeeEeeccC
Q ss_pred cceEEeecCCcCCcccCCCCCChhhhhccCCcceEEecccccccCCCccc--ccCCccccCCCCcccccccccccccchh
Q psy13309 693 LSCRFLFGGDHGRLKYIPPEEFSPLVESLLPHQVLSIDPCFYFGNLPKVV--LAGPWHVEDDTAFVPTPVDTSMITLPHY 770 (1568)
Q Consensus 693 ~~~~fnfGg~~~~fk~~Pp~g~~p~~~a~~p~~~~~~~~~~~~g~~~~~~--l~Gp~~~~~~~~f~P~PVdTs~v~Lp~~ 770 (1568)
..+||++||+||.|||+||+||+||+||++|+++++++|..+|......+ |.||+.+.+++.|+|+|||||+|.||++
T Consensus 804 ikvrfllggrhgefkflpp~gyapcyea~lpkeklk~e~~keyk~d~~~~rdllg~t~~lsqaaf~p~pvdtsqiilpph 883 (5019)
T KOG2243|consen 804 IKVRFLLGGRHGEFKFLPPPGYAPCYEALLPKEKLKLEHSKEYKQDADGIRDLLGPTQFLSQAAFIPCPVDTSQIILPPH 883 (5019)
T ss_pred eEEEEEecccccceeecCCCCCccHHHHhCcHhhhccchhHhhhhcchhhhhhccchhhhhhhccccccccccccccChH
Q ss_pred hhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhccccccccccccCCcchhhhh
Q psy13309 771 VENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIRSETSILFYHPPRVKFHA 850 (1568)
Q Consensus 771 l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~~~~e~~~~~Y~~~~~~~~~ 850 (1568)
||.|+|||||||||+|.|+||+.||+||..|||+++.|||||.|.+||+ +|+||+.+|+.||
T Consensus 884 lekirdklaenihelw~mnkielgw~~g~irddnkrqhpclvefsklpe----~eknynlqms~et-------------- 945 (5019)
T KOG2243|consen 884 LEKIRDKLAENIHELWGMNKIELGWQFGKIRDDNKRQHPCLVEFSKLPE----QEKNYNLQMSLET-------------- 945 (5019)
T ss_pred HHHHHHHHHHHHHHHhcccceeecceeccccCCccccCceeeecccCch----hhhccchhhhHHH--------------
Q ss_pred hhhhHHHhccceeecCCCCCc--cccccCCCCCCCCCCCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCc
Q psy13309 851 KVLPTILAIGYHISMDKPPSR--IKTVRLPNEPFMQPNGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGW 928 (1568)
Q Consensus 851 e~LktllalG~~i~~~~~~~~--~~~~~lp~~~~~~~~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GW 928 (1568)
|||+||+||||+..++.++ +|+++||++ |+.++||+|+|+|+|.|+|.|.++.++||||||.||+||++||+|||
T Consensus 946 --lktllalgchi~~~~~~aed~~kk~klpkn-y~ls~gykpapldls~ikl~p~qe~lvdklaenahnvwakdrikqgw 1022 (5019)
T KOG2243|consen 946 --LKTLLALGCHIAHSDEAAEDDLKKMKLPKN-YMLSNGYKPAPLDLSDIKLLPPQEALVDKLAENAHNVWAKDRIKQGW 1022 (5019)
T ss_pred --HHHHHHhcccccccChhhhhHHHhccCCcc-eeccCCCCCCCCcHHhcccCCcHHHHHHHHHHhhhhhhHHHHHhccc
Q ss_pred ccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHccceecCCCcchhhHHHHHhhhccccceeEEeeccce
Q psy13309 929 TYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNLDPPTGEQQDALLAEQNRIRFMSFRTYRAEKNY 1008 (1568)
Q Consensus 929 tyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i~~p~~~~~~~~~~~~~~~~~~~~R~~R~e~ty 1008 (1568)
|||.++|.++|++|.||||..|++..|+.|+++.+|.++|++.+||+|++|++| ..++..+......++||+||+|++|
T Consensus 1023 tygiqqd~knkrnprlvpy~~lddrtkksnkdslreavrt~~gygynie~~dqd-l~~a~~e~~sgt~dk~r~fr~eksy 1101 (5019)
T KOG2243|consen 1023 TYGIQQDLKNKRNPRLVPYALLDDRTKKSNKDSLREAVRTFLGYGYNIEAPDQD-LAAAAAEKCSGTGDKFRFFRAEKSY 1101 (5019)
T ss_pred chhhhhHhhccCCCccccccccchhhcccchHHHHHHHHHHhcccccCCCCchh-HHHHHHHHhcCCcceeEEEeeehhh
Q ss_pred eeecceeEEEEEEeeCCceEEeeccCCCCCCCCCCCCCCceeEeCCcc---ccccCCCCCCCCCCceEE-----------
Q psy13309 1009 AVSSGKWYFEFEILTAGPMRVGWARVDCAPGAQLGSDENSWAFDGFNR---HIKINLFQQDKKDYSISG----------- 1074 (1568)
Q Consensus 1009 ~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~---h~~~~~yG~~w~~GDVvG----------- 1074 (1568)
||.+|||||||+++|.|.||||||+|+|+||.++|.|+..|+|||+++ |+|.++||+.|++|||||
T Consensus 1102 avkagkwyfefe~vt~gdmrvgwarpgc~pd~elgadd~af~fdg~k~qrwhqg~~~~grswq~gdvvgcmi~l~d~sm~ 1181 (5019)
T KOG2243|consen 1102 AVKAGKWYFEFETVTAGDMRVGWARPGCQPDQELGADDQAFAFDGFKAQRWHQGNEHFGRSWQAGDVVGCMIDLDDASMI 1181 (5019)
T ss_pred eeeccceEEEEEEeeccceeecccCCCCCcchhhCCccceeeeccchhhhhhccccccccccCCCCeEEEEEecccceEE
Q ss_pred EEeCCccccccCCCcccccccc-CCccceeeeecCCcEEEEEeCCCccccccccccCCCCCcccccccccccchhhhccc
Q psy13309 1075 FSLNGELLMDALGGETTFADVQ-GEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGLQEGYEPFCVNMKRAVTYWYTRD 1153 (1568)
Q Consensus 1075 F~lNG~~l~~~~g~g~AF~di~-~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~qeg~~p~~~~~~~~~~~w~~~~ 1153 (1568)
|++||+.|.+..|++.||.|+. ++||.|.|+|+..|++|+|||.|++||||||+||+||||+||++||+|+++|||+|+
T Consensus 1182 ftlngeili~~~gselaf~d~di~~gfipic~lg~aqigrmn~g~d~st~k~~ticglqeg~epfavn~nrdi~mw~skr 1261 (5019)
T KOG2243|consen 1182 FTLNGEILIDDKGSELAFADFDIEDGFIPICCLGLAQIGRMNFGKDASTFKFFTICGLQEGFEPFAVNMNRDIAMWFSKR 1261 (5019)
T ss_pred EEEcCeEEEcCCCCeeeeccccccCCceeeeehhhHhhcccccCCcccceeeeeeecccccCccceecccchHHHHHHhh
Q ss_pred ccceeecCCCCCceEEEEeCCCCCCCCcceeeeccc-ccCCCCceEEEEeccceeeccccc-------------------
Q psy13309 1154 QPIFENTDDYPSVIDVTRIPAGSDTPPCLKISHNTF-ETMEKANWEFLRLSLPVTCMSTFI------------------- 1213 (1568)
Q Consensus 1154 ~~~f~~~~~~~~~~~v~r~~~~~~~~p~lk~~~~~~-~~~~~~~~~~~rls~pv~~~~~~~------------------- 1213 (1568)
+|+|.++|.+|+||||+||+||+|+|||||||||+| +++++++|.|+||||||+|++.|.
T Consensus 1262 lp~f~~vp~~h~hiev~ridgtids~pclkvt~ksfgsqnsn~di~~~rlsmpiec~~~fs~svagglpgaglfgp~~d~ 1341 (5019)
T KOG2243|consen 1262 LPQFLNVPKDHEHIEVMRIDGTIDSPPCLKVTHKSFGSQNSNADIIFCRLSMPIECAESFSHSVAGGLPGAGLFGPCLDL 1341 (5019)
T ss_pred chhhhcCCCCCCceEEEEeccccCCCcchhhhhhhhccCCCCCceEEEEecCchhHHHHhhhhhccCCCCccccCCccch
Q ss_pred ---------------------------------------------cchhhhhhhhhhhhhhhh-------hhHhhh--cC
Q psy13309 1214 ---------------------------------------------DENEKQRRWKEIRNRQQI-------LMMEAV--DN 1239 (1568)
Q Consensus 1214 ---------------------------------------------~~~~~~~~~~~~~~~~~~-------~~~~~~--~~ 1239 (1568)
+.++.++||...+.+++- +.+++. ++
T Consensus 1342 e~ydadsdfevlmktahghlvpdrvdkdkeatkpefnnhkdyaqekpsrlk~rfllrrtkpdystshsarltedvladdk 1421 (5019)
T KOG2243|consen 1342 EAYDADSDFEVLMKTAHGHLVPDRVDKDKEATKPEFNNHKDYAQEKPSRLKQRFLLRRTKPDYSTSHSARLTEDVLADDK 1421 (5019)
T ss_pred hhhcccccHHHHHhhcccccCccccccchhccCccccchhhhhhhcchHHHHHHHhhccCCCccccchhhhhhhhcccch
Q ss_pred CChhhhhhcccc-ceeeeecCCC------------------------------------CCCCccccccccceEEEccCC
Q psy13309 1240 TTPAHIEQIMKS-GFSMSDIKGK------------------------------------SASLPASVDQLRRYIEIKQSD 1282 (1568)
Q Consensus 1240 ~~~~~~~~~~~~-~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~ 1282 (1568)
++...+++.+++ ||++|||+|| +|+||+|+||+|||| ||+||
T Consensus 1422 ~~~d~l~~tst~cyyairif~gqdpa~vwvgwit~d~h~y~~~fdl~k~~tvtvtlgdekgkvhesikrsncym-v~~gd 1500 (5019)
T KOG2243|consen 1422 DDQDFLMHTSTQCYYAIRIFAGQDPACVWVGWITPDFHLYDEGFDLDKNCTVTVTLGDEKGKVHESIKRSNCYM-VCAGD 1500 (5019)
T ss_pred hhHHHHhhccceeEEEEEEecCCCCceeEEEeecCchhhcccccCcCcceEEEEEeccccccHhhhhhhcceeE-Eeccc
Q ss_pred CCccccccCCce-----------------EecCCCC-------CCCcceeeeeEEeeCccceEeEeccccCccccccccc
Q psy13309 1283 LPSAVAAKKTRE-----------------FRCPPRE-------QPWRCFYCNLFVEATSKEILQIELGRTSTTLPLSAAV 1338 (1568)
Q Consensus 1283 ~~~~~~~~~~~~-----------------f~~~~~~-------ep~~~l~~avfv~pt~~~~~qfelg~~k~~~Plsaa~ 1338 (1568)
..++++.+++++ |-+|||| ||+||+|||||.+|||+++|||||||+||+||||||+
T Consensus 1501 ~~a~~qrs~r~n~~leigc~vd~a~gllsf~angkel~t~yqvep~tk~fpavf~q~ts~~~fqfelgkikn~mplsa~i 1580 (5019)
T KOG2243|consen 1501 IMAPGQRSGRNNNDLEIGCLVDAAMGLLSFIANGKELGTCYQVEPNTKLFPAVFAQATSPNLFQFELGKIKNAMPLSAAI 1580 (5019)
T ss_pred ccccccccCCCCCCceeeehHHhhhhhhhhhccCcccceeEeecCCccccHHHhhccCCCceeeeehhhhcccCcchHHh
Q ss_pred ccccccCCCCCCCCcccceeeccceeeccCCCcceEeeeecccccCceeeecCccchhccccCCCCcccchhhcccchhh
Q psy13309 1339 LQNSERHVIPQFPPRLKVQCLKPHQWARVPNTSLEVHALKLSDIRGWSMLCEDPISMLALHIPEEDRCIDILELIEMEKL 1418 (1568)
Q Consensus 1339 ~~s~~~~~~pqcppRl~vq~l~~~~w~R~p~~~l~~~~~~~~~~~gw~~~c~~p~~~~~l~ipee~r~~dilel~e~~~l 1418 (1568)
|+|++|||+|||||||+||.|+||.|+||||+||+|++.|+|+|+||.|||.||+|||+|||||||||+|||||.|++||
T Consensus 1581 fkse~knpvpqcpprl~vq~i~~vlwsrmpn~flkvd~~riser~gw~vqcldplq~malhipeenr~vdilel~eqedl 1660 (5019)
T KOG2243|consen 1581 FKSEEKNPVPQCPPRLDVQFIQHVLWSRMPNQFLKVDTERISERHGWLVQCLDPLQFMALHIPEENRCVDILELCEQEDL 1660 (5019)
T ss_pred hhhcccCCCCCCCCccchHHHHHHHHHhCcchhhhhhhhhhhhhcchhhhhcCHHHHHhhcCCcccccchHHHHhhHHHH
Q ss_pred hccchhhHHHHHHHhhccChHHHHHhhccCCchhhhHhhhcccCCccccchhhhhhHhhhhhhhHhhhhhhcceEeEecC
Q psy13309 1419 LSFHAHTLTLYAALCYQANYRAAHVLCQHVDQKQLLYAIQSEYMSGPLRQGFYDLLIALHIESHATSMEVCKNEFIIPLG 1498 (1568)
Q Consensus 1419 ~~fh~htl~ly~a~c~~gn~~vah~lc~hvd~~qllyai~~~yl~g~lr~g~ydLli~~hL~~~~~ar~~~~~e~iiPl~ 1498 (1568)
|+||+||||||+|+||+||||||||||||||++||+|||+|.||||.||+|||||||+|||+|+++||+||+||||||||
T Consensus 1661 lkfhyhtlrlysavcalgn~rva~alcshvd~~ql~yaidnkylpgllrag~ydlli~ihlas~~~~klmm~neyiip~t 1740 (5019)
T KOG2243|consen 1661 LKFHYHTLRLYSAVCALGNHRVAHALCSHVDEPQLFYAIDNKYLPGLLRAGFYDLLIDIHLASAAEAKLMMKNEYIIPIT 1740 (5019)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHhccChHHHHHHHhcccchhhhhhhhHHHhHHHhhhhHHHHHHhhcCceEeecc
Q ss_pred cccc--ccccCCcCCCCCCCc-cceeeccCCCcCCCCcccccccccccCCCcchHHHHHHHHHHhcccccc
Q psy13309 1499 PKLK--ELYEDGEMGHSLRSL-RTESIRPTMKMTDIAPDSIENIRSLYSPHFPLDVVRDYIMTARRKQTTC 1566 (1568)
Q Consensus 1499 ~~~~--~l~~~~~~~~~~p~~-~~~slrp~~~~~~~~~~~~~~~~~~~~p~~pl~~lk~~~~~~l~~~~~~ 1566 (1568)
.+|| .||||+.++|+|||+ .+|||||.|.||+||||++++++..+||+||||+||.++|+|||+|+.|
T Consensus 1741 ~~tk~i~lfpde~kkhglpgigl~t~lkp~~~fssp~fv~~~~d~~k~spe~pld~lksk~i~mlteavk~ 1811 (5019)
T KOG2243|consen 1741 EETKNICLFPDENKKHGLPGIGLRTCLKPGFQFSSPCFVSIGEDCQKQSPEFPLDILKSKAIQMLTEAVKC 1811 (5019)
T ss_pred ccccceEecCCcccccCCCCcchhhhcCCCccccCceeEEechhhhhcCCCCchHHHHHHHHHHHHHHHHh
No 2
>KOG3533|consensus
Probab=100.00 E-value=9.1e-96 Score=881.65 Aligned_cols=497 Identities=22% Similarity=0.366 Sum_probs=428.6
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCC-Cccc-ccCC-----CCce
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATE-RYLH-TTKE-----NDLS 72 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~-~yLH-~S~~-----~~~~ 72 (1568)
||++.+.. |..|||||||+||. +|||+|||+|+|+||+||+||+|.+||+|+|.+|+.+ |.|| +|+. .||.
T Consensus 136 YlTVnKrlPallEkNAMrV~LDa-aGNEGSWfyI~PfyKlrsiGDnVvvGdKv~L~Pvna~~Q~lHvas~~eL~Dnpgck 214 (2706)
T KOG3533|consen 136 YLTVNKRLPALLEKNAMRVYLDA-AGNEGSWFYIEPFYKLRSIGDNVVVGDKVSLIPVNAGTQPLHVASSFELLDNPGCK 214 (2706)
T ss_pred eEEEeccChhhHhhcceEEEeec-cCCccceEEeehhHHhhccCCceEEcceEEEcccCCCCccchhhhccccCCCCCcc
Confidence 89999988 99999999999997 9999999999999999999999999999999999999 9999 7765 4899
Q ss_pred EEEeeeceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCC----ccCccccceeEEEEecCccc----
Q psy13309 73 VVNASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLI----CPDRSKYLFHIVVYEGGSVM---- 144 (1568)
Q Consensus 73 EVnaS~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~----~~~~~~~~~~v~~~e~g~~~---- 144 (1568)
|||+.+++|+|||.+| |+|++++++.||| ||||||||+||+ ||++.+ +++||+++|+|++
T Consensus 215 EVN~~N~nTsWki~lF------m~~~en~e~~lKg-----GDVVRLFHAeQekFLT~Dey~k-q~hVFLRtT~RqSAtsA 282 (2706)
T KOG3533|consen 215 EVNCLNCNTSWKIFLF------MLFDENQENSLKG-----GDVVRLFHAEQEKFLTCDEYPK-QNHVFLRTTNRQSATSA 282 (2706)
T ss_pred cccccCCCCcceeeee------eeeccchhhhhcc-----CcEEEeecccccceeehhcccc-cceEEEeccCCcccccc
Confidence 9999999999999999 9999999999999 899999999985 888876 6789999999984
Q ss_pred cCCcceEEEeeccc-ccCCccceecCceEEEEcCCCceeeeeecCcccccccccc------------------CCCCc-c
Q psy13309 145 SQARSLWRLELART-KWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEA------------------TTASS-T 204 (1568)
Q Consensus 145 tsa~sLWeIE~~~~-~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a------------------~~~~T-~ 204 (1568)
||+++||+||++++ +|+||+.+|++.||||||+||+||+++.++.... +..+. +..++ .
T Consensus 283 TSSkALWEveVVqhd~cRGGag~WNslyRFKHLATg~YLaAE~~~d~~~-~A~~~~~as~~~~~~~~~~k~~~~g~~~~n 361 (2706)
T KOG3533|consen 283 TSSKALWEVEVVQHDPCRGGAGKWNSLYRFKHLATGMYLAAEPSPDQVK-DAMNGRRASLIYSKTNNPMKMYSDGPNGVN 361 (2706)
T ss_pred cccccceeEEEEecCCCCCcccchhhhhhhhhhcccceeecCCCccccc-cccccccccccccccCChHhhhcCCCCccc
Confidence 89999999999988 8999999999999999999999999998764211 11100 11111 1
Q ss_pred eEeeccccccc----cccccccccc---cCCcceeeCC------cEEEEEEcccCeeeEeeecccccccCChhhhhceEe
Q psy13309 205 FCLRQEKDDQK----IVLEDKDLEV---IGAPIIKYGD------STVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVL 271 (1568)
Q Consensus 205 F~f~~~ke~~~----~v~~~~di~~---m~~~~I~~gd------SyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il 271 (1568)
-..+...++.. .|+.++||++ ++++++.++| |||||+|.||++|||++++++ |.++ .+|+|
T Consensus 362 ~~~~~a~eki~y~lVsvP~~~DiaslFeLDptTl~k~dslVPrnSYVRLrHlcsntWVhaT~ipi-----d~~e-ekpvm 435 (2706)
T KOG3533|consen 362 ESTRTAQEKIPYVLVSVPTGNDIASLFELDPTTLMKSDSLVPRNSYVRLRHLCSNTWVHATTIPI-----DSKE-EKPVM 435 (2706)
T ss_pred cccccccccCceEEEecCCCcchhHhhccChHHhccCCCcCCchhhHHHHhhccCceeecccccc-----cccc-cCceE
Confidence 12222233332 2578889875 5777777665 899999999999999998775 5554 48999
Q ss_pred cccccc---cccccee--ccchHHHHHHHHHHHHHHHHHHHHHHhhhh---hcccccccccccccHHHHHHHHHHHHhHc
Q psy13309 272 HEEGKM---DDGLDFS--RSQEEESRTARVIRKCSSLFTQFISGLEAL---QVNRRHSLFCASVNLNEMVMCLEDLINYF 343 (1568)
Q Consensus 272 ~~~g~~---dD~f~~~--~v~~eEvrd~~~i~s~~~~l~~Fi~~L~~~---~~~~~~~~~~~~~~l~~v~~~L~dLI~F~ 343 (1568)
++.|+. +|+.+|+ .|++.|+||++|+++++++|..|+++|+.+ ++++++ ++++|+|||.|+
T Consensus 436 lkv~~~p~keDKEaFAlvpV~p~EVRDLDFANDA~kvLa~~~~kl~~G~Isqnerr~-----------vtqLLeDli~FV 504 (2706)
T KOG3533|consen 436 LKVGCEPNKEDKEAFALVPVNPDEVRDLDFANDACKVLANFIKKLKIGVISQNERRS-----------VTQLLEDLILFV 504 (2706)
T ss_pred EEEecccCccchhheeEeccCHHHhhcccccchHHHHHHHHHHHHhcCccchhHHHH-----------HHHHHHHheEEe
Confidence 999876 7765555 688999999999999999999999999975 444444 899999999999
Q ss_pred cCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhh
Q psy13309 344 AQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKG 423 (1568)
Q Consensus 344 ~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirg 423 (1568)
++..+...+..+....+|+|+||||||||+||++||.+|+.++.....|..+.+..+|.+++++.+++.+++||++++|
T Consensus 505 t~~~nn~q~vL~i~~~kPnRdRQKLmREQniLkQvF~iLkaPF~~~t~g~Gp~lrleeLsDqrnap~k~mfrLCYrvLr- 583 (2706)
T KOG3533|consen 505 TNSSNNGQDVLKISDFKPNRDRQKLLREQNILKQVFLLLKAPFLPRTTGLGPLLRLEELSDQRNAPFKTMFRLCYRVLR- 583 (2706)
T ss_pred ccCCcCCCcceeeeccCCchHHHHHHHHHHHHHHHHHHhcCcCccccCCCCceeeHHhhcCccccHHHHHHHHHHHHHH-
Confidence 9843332222223334999999999999999999999999887765577777788899999999999999999999999
Q ss_pred ccchhhhhhhhhhHHHHHHHhcccccccCCCHH--HHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCchhhhhhcc
Q psy13309 424 NHTNCAQFANTNRLNWLFSRLGSQASSEGTGML--DVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDPKVLDVLCS 500 (1568)
Q Consensus 424 N~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gil--dvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~k~Ld~Lss 500 (1568)
++.+.|++||| ||+++++.||+||||||+ ||+|++||||+++|+ +|+..||++|++|+|+ +|+||||||||+
T Consensus 584 -~SQqdYRKNQE---yiAk~Fg~mQ~QIGyDilAEDTiTalLHNNrKLLEKhita~eietFVsLvRk-Nre~rFLDYLsD 658 (2706)
T KOG3533|consen 584 -HSQQDYRKNQE---YIAKKFGEMQEQIGYDILAEDTITALLHNNRKLLEKHITAPEVETFVSLVRK-NREPRFLDYLSD 658 (2706)
T ss_pred -HhHHHHhhhHH---HHHHHHHHHHHHhchhhhhhhhHHHHHccCHHHHHHhcchHHHHHHHHHHHh-cCCchHHHHHHH
Confidence 78899999997 788999999999999999 999999999999999 9999999999999999 799999999999
Q ss_pred ccccCCcccccchHHHHhhhcCC--CCcceeeeccc
Q psy13309 501 LCVGNGVAVRSSQNNICDYLLPG--KNLLLQTQLDE 534 (1568)
Q Consensus 501 LCvcnG~AI~~NQelIc~~LL~~--~~lll~T~~v~ 534 (1568)
||||||.||+++||+||+.+|++ +|||++|++++
T Consensus 659 LCVsn~~ai~vtQELICk~vLs~kn~DIli~Tki~~ 694 (2706)
T KOG3533|consen 659 LCVSNGEAIPVTQELICKSVLSPKNRDILIDTKIID 694 (2706)
T ss_pred HHhhCCcccHHHHHHHHHHhcCCCCCceEEEeeeee
Confidence 99999999999999999999987 57999999864
No 3
>KOG2243|consensus
Probab=100.00 E-value=3.8e-68 Score=631.57 Aligned_cols=447 Identities=30% Similarity=0.493 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHH-HHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcC
Q psy13309 412 YLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGML-DVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHG 489 (1568)
Q Consensus 412 ~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gil-dvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~ 489 (1568)
.+--+|.++-|-|.-|.+ ++..-++..-..+.+...++.+ +.|.+++..|+ -| .--.+.++++|+.|++..
T Consensus 500 mi~lvl~cidrl~iy~s~-----ahfa~ia~~eag~awk~iln~ly~llaalirgnr--~ncaqfs~~ldwliskldrle 572 (5019)
T KOG2243|consen 500 MIALVLECIDRLHIYNSA-----AHFADIAGEEAGEAWKEILNLLYELLAALIRGNR--KNCAQFSGNLDWLISKLDRLE 572 (5019)
T ss_pred HHHHHHHHHHHHhhhhhH-----HHhhhhhhhhhhhHHHHHHHHHHHHHHHHHhcch--hhHHHhcCcHhHHHHHHHHhh
Q ss_pred CCchhhhhhccccccCCcccccchHHHHhhhcCCCCcceeeecccceehhhhhhhhhCCCCccceeecceeecccccccc
Q psy13309 490 RDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDEHIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRS 569 (1568)
Q Consensus 490 r~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~~~~lll~T~~v~hi~s~i~~lek~gr~p~vl~vlcslcv~~G~a~~s 569 (1568)
....+|++|..+.+-...|.++.-|- ||+||||+||||||++||||+|||+|+|+|||||+
T Consensus 573 assgilevlhcil~espealnii~eg-------------------hiksiislldkhgrnhkvldilcslc~c~gvavra 633 (5019)
T KOG2243|consen 573 ASSGILEVLHCILTESPEALNIIAEG-------------------HIKSIISLLDKHGRNHKVLDILCSLCLCHGVAVRA 633 (5019)
T ss_pred hccchHhHhhhhhcCCHHHHhHHhhh-------------------hHHHHHHHHHhcCCcccHHHHHHHHHhhcceeeec
Q ss_pred cCCceeEeecCCCccccccceecccccccccCCCCccccccccccCCccccccCC---------ccccCCccccccCCCC
Q psy13309 570 SQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGGGEKWGGNGVGDDLYSFGFDGA---------HLWTGGRRTEVIPGTL 640 (1568)
Q Consensus 570 ~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~g~~~gg~gvGdd~~S~gfDG~---------~~w~~~~~~~~~~~~~ 640 (1568)
||++||+++||||||+|||+++++|+++||++|.|...|+.....|+|....|.+ |++.||++.+ +|
T Consensus 634 nq~licdnllp~r~lllqtrlin~vss~rpniflgvaegsaqykkwy~el~id~~dpf~tae~thlrvgwass~----gy 709 (5019)
T KOG2243|consen 634 NQHLICDNLLPGRDLLLQTRLINDVSSIRPNIFLGVAEGSAQYKKWYFELIIDHTDPFLTAEATHLRVGWASSE----GY 709 (5019)
T ss_pred cCceeccccCCcchhhHHHHhhhhhhhcCCceeEeeccchHHHHHHHHHHhhhcCCcceecccceeeeeeeccC----CC
Q ss_pred CCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcce--------------------eeeeccCCcceEEeec
Q psy13309 641 EPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFF--------------------PVISCSSKLSCRFLFG 700 (1568)
Q Consensus 641 ~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~f--------------------pavS~~~~~~~~fnfG 700 (1568)
.|.++.|+.|| |++||+++++|+|||+++ ++||||.+.+
T Consensus 710 ap~pggge~wg---------------gngvgddl~sygfdglhlwsg~i~r~vas~nqhllrsddvisccldl~------ 768 (5019)
T KOG2243|consen 710 APCPGGGEEWG---------------GNGVGDDLFSYGFDGLHLWSGCIARAVASPNQHLLRSDDVISCCLDLG------ 768 (5019)
T ss_pred CCCCCCccccc---------------CCCccchhhhcCCCcchhhcccchhhhcChhhhhhcccchhhhhhhcC------
Q ss_pred CCcCCcccCCCCCChhhhhccCCcceEEecccccccCCCcccccCCccccCCCCcccccccccccccchhhhHHHHHHHH
Q psy13309 701 GDHGRLKYIPPEEFSPLVESLLPHQVLSIDPCFYFGNLPKVVLAGPWHVEDDTAFVPTPVDTSMITLPHYVENIRDKLAE 780 (1568)
Q Consensus 701 g~~~~fk~~Pp~g~~p~~~a~~p~~~~~~~~~~~~g~~~~~~l~Gp~~~~~~~~f~P~PVdTs~v~Lp~~l~~~~eklAe 780 (1568)
.|.++||+++.+++|++++++++| .|+|+
T Consensus 769 ---------------------~psisfringqpvqgmfenfn~dg--------lffpv---------------------- 797 (5019)
T KOG2243|consen 769 ---------------------APSISFRINGQPVQGMFENFNIDG--------LFFPV---------------------- 797 (5019)
T ss_pred ---------------------CCceEEEECCccchhHHhcCCCcc--------eeeee----------------------
Q ss_pred HHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhccccccccccccCCcchhhhhhhhh-HHHhc
Q psy13309 781 NIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIRSETSILFYHPPRVKFHAKVLP-TILAI 859 (1568)
Q Consensus 781 n~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~~~~e~~~~~Y~~~~~~~~~e~Lk-tllal 859 (1568)
|..++.|+.+|..|++++++++..| ++..++....|+ .-+.+
T Consensus 798 ----~sfsagikvrfllggrhgefkflpp---------------------------------~gyapcyea~lpkeklk~ 840 (5019)
T KOG2243|consen 798 ----MSFSAGIKVRFLLGGRHGEFKFLPP---------------------------------PGYAPCYEALLPKEKLKL 840 (5019)
T ss_pred ----EeeccCeEEEEEecccccceeecCC---------------------------------CCCccHHHHhCcHhhhcc
Q ss_pred cceeecCCCCCccccccCCCCCCCCCCCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCC
Q psy13309 860 GYHISMDKPPSRIKTVRLPNEPFMQPNGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMA 939 (1568)
Q Consensus 860 G~~i~~~~~~~~~~~~~lp~~~~~~~~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k 939 (1568)
.-.-++......++.+..|.. ++.+..|.|+|||||+|.|||+++.++|+||||+|++|.++||+.||+||++|||+++
T Consensus 841 e~~keyk~d~~~~rdllg~t~-~lsqaaf~p~pvdtsqiilpphlekirdklaenihelw~mnkielgw~~g~irddnkr 919 (5019)
T KOG2243|consen 841 EHSKEYKQDADGIRDLLGPTQ-FLSQAAFIPCPVDTSQIILPPHLEKIRDKLAENIHELWGMNKIELGWQFGKIRDDNKR 919 (5019)
T ss_pred chhHhhhhcchhhhhhccchh-hhhhhccccccccccccccChHHHHHHHHHHHHHHHHhcccceeecceeccccCCccc
Q ss_pred CCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHcccee---cCCCcchhhHHHHHhhhccccceeEEeeccceeeecc
Q psy13309 940 RSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNL---DPPTGEQQDALLAEQNRIRFMSFRTYRAEKNYAVSSG 1013 (1568)
Q Consensus 940 ~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i---~~p~~~~~~~~~~~~~~~~~~~~R~~R~e~ty~v~~G 1013 (1568)
+|||||.|++|||.||+||.+|..||||||+++|+|| ++.++| .++.++++++|.+++|
T Consensus 920 qhpclvefsklpe~eknynlqms~etlktllalgchi~~~~~~aed---------------~~kk~klpkny~ls~g 981 (5019)
T KOG2243|consen 920 QHPCLVEFSKLPEQEKNYNLQMSLETLKTLLALGCHIAHSDEAAED---------------DLKKMKLPKNYMLSNG 981 (5019)
T ss_pred cCceeeecccCchhhhccchhhhHHHHHHHHHhcccccccChhhhh---------------HHHhccCCcceeccCC
No 4
>PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels. They become activated upon binding of their respective ligands, Ca2+ and IP3, opening an intrgral Ca2+ channel. Ryanodine receptor activation is a key component of muscular contraction, their activation allowing release of Ca2+ from the sarcoplasmic reticulum. Mutations in the ryanodine receptor lead to malignant hyperthermia susceptibility the and central core disease of muscle.; GO: 0005262 calcium channel activity, 0070588 calcium ion transmembrane transport, 0016020 membrane; PDB: 1N4K_A 2XOA_A 3UJ0_B 3UJ4_A 3T8S_A.
Probab=99.97 E-value=7.3e-32 Score=298.79 Aligned_cols=205 Identities=35% Similarity=0.501 Sum_probs=97.1
Q ss_pred HHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHH
Q psy13309 331 EMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIIS 410 (1568)
Q Consensus 331 ~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~ 410 (1568)
+|+++|+|||.||++++++..++.++..++|+++||+|||++|++++|+++|+.+.... ++.+++ .+++....|.+++
T Consensus 1 ~v~~~l~~Li~f~~~~~~~~~~~~~~~~~~~~~~rQ~llrnl~i~~~v~~~L~~~~~~~-~~~~~~-~~~~~~~~~~~l~ 78 (207)
T PF01365_consen 1 EVLKILRDLIKFCMGSEEEDQHLLKQRNGQPNRERQKLLRNLGIHELVLDLLKNPFDQF-QGDFKD-LGDQKDSSFKELF 78 (207)
T ss_dssp -HHHHHHHHHHHHTTTS--SS-SHHCCCCHHHHHHHHHHHHTTHHHHHHHHHHHHCTS-----------STGGHCHHHHH
T ss_pred CHHHHHHHHHhHhCCCCcccchHHHHhcCCcchhhHHHHHHHHHHHHHHHHhhhhhhcc-cchhhh-hcchhccHHHHHH
Confidence 47899999999999977666667777788999999999999999999999998765432 445554 5556677899999
Q ss_pred HHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHHhhccHHHHHHHHHHHHHcCC
Q psy13309 411 GYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMRDEHIKVIISLLEKHGR 490 (1568)
Q Consensus 411 ~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elLn~I~e~hI~~fIsLL~k~~r 490 (1568)
+.+|++|+.+|++|+.||++++. |++|+++.+...+...|.+++|+|++|++||+++++.+.+.+|+.||++|+++||
T Consensus 79 ~~~~~lL~~f~~~n~~NQ~~l~~--~~~~l~~~~~~~~~~~~~~~~d~l~~i~~dN~~L~~~i~e~~I~~~i~ll~~~gr 156 (207)
T PF01365_consen 79 RLCYRLLRQFCRGNRENQKYLFK--HLDFLISIFMQLQIGYGLGALDVLTEIFRDNPELCESISEEHIEKFIELLRKHGR 156 (207)
T ss_dssp HHHHHHHHHHHTT-HHHHHHHHH--HHH-----HHCCCH-TTHHHHHHHHHHHTT-------------------------
T ss_pred HHHHHHHHHHHHhCHHHHHHHHH--HHhHHHHHHHHhhccCCchHHHHHHHHHHCcHHHHHHhhHHHHHHHHHHHHHcCC
Confidence 99999999999999999987773 6999988877655455555889999999999999999999999999999999999
Q ss_pred CchhhhhhccccccCCcccccchHHHHhhhcC-CC-Ccceeeecccceehh
Q psy13309 491 DPKVLDVLCSLCVGNGVAVRSSQNNICDYLLP-GK-NLLLQTQLDEHIKVI 539 (1568)
Q Consensus 491 ~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~-~~-~lll~T~~v~hi~s~ 539 (1568)
+++||++|++||+|+|+||+.||++||+.||. ++ |++++|.++++..+|
T Consensus 157 ~~~~L~~L~~lc~~~g~pI~~nQ~lI~~~ll~~~~~dll~~~~~~~~~~~~ 207 (207)
T PF01365_consen 157 QPRYLDFLSSLCVCNGNPIPENQNLICQELLLEGEADLLVFTNDRKPECSM 207 (207)
T ss_dssp ---------------------------------------------------
T ss_pred ChHHHHHHhhhcccCCcCCHHHHHHHHHHHcCCCCccEEEEeecccccccC
Confidence 99999999999999999999999999977774 45 799999999988776
No 5
>PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor []. The domain is found in four copies in the ryanodine receptor. The function of this domain is unknown.; PDB: 4ETV_A 3RQR_A 4ETT_A 4ERT_A 4ESU_A 4ETU_A 4ERV_A 3NRT_E.
Probab=99.96 E-value=9.4e-31 Score=253.86 Aligned_cols=93 Identities=48% Similarity=0.925 Sum_probs=76.0
Q ss_pred CCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHH
Q psy13309 887 GYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETV 966 (1568)
Q Consensus 887 ~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~l 966 (1568)
+|+|+|||||+|+||++++.++|+||||+|++||++|+++||+||+++|+..|+|||||||+.||+.||++||+++++++
T Consensus 1 ~y~P~Pvdts~v~L~~~l~~~~E~lAen~H~~Wa~~r~~~GW~yG~~~d~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~l 80 (94)
T PF02026_consen 1 GYKPKPVDTSQVTLPPELEELIEKLAENEHDRWAKERIEQGWTYGEVRDDSRKTHPCLVPYDELSEEEKEKDRDMVRETL 80 (94)
T ss_dssp C-----B-GTT----HHHHHHHHHHHHHHHHHHHHHHHHTT-BE-SSHBTTTTBETT-S-GGGS-HHHHHHHHHHHHHHH
T ss_pred CCcCCCcCcCCeecCHHHHHHHHHHHHHHHHHHHHHHHhccceeccccccCCCCCCCCcChhhCCHHHHHHhHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHccceecCC
Q psy13309 967 RTLLVYGYNLDPP 979 (1568)
Q Consensus 967 k~ll~~Gy~i~~p 979 (1568)
|+|+++||+|+++
T Consensus 81 k~l~~~Gy~i~~~ 93 (94)
T PF02026_consen 81 KTLLALGYHIERA 93 (94)
T ss_dssp HHHHHTTEEEEE-
T ss_pred HHHHHcCcEEeeC
Confidence 9999999999865
No 6
>PF02026 RyR: RyR domain; InterPro: IPR003032 This domain is called RyR for Ryanodine receptor []. The domain is found in four copies in the ryanodine receptor. The function of this domain is unknown.; PDB: 4ETV_A 3RQR_A 4ETT_A 4ERT_A 4ESU_A 4ETU_A 4ERV_A 3NRT_E.
Probab=99.89 E-value=8.5e-24 Score=205.46 Aligned_cols=93 Identities=45% Similarity=0.806 Sum_probs=70.0
Q ss_pred CcccccccccccccchhhhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhcccc
Q psy13309 754 AFVPTPVDTSMITLPHYVENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRIR 833 (1568)
Q Consensus 754 ~f~P~PVdTs~v~Lp~~l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~~~ 833 (1568)
.|.|+||||++|.||..++.++|+||||.|++||+.|+++||+||+.+|+..|+|||||||+.||+ .+|++
T Consensus 1 ~y~P~Pvdts~v~L~~~l~~~~E~lAen~H~~Wa~~r~~~GW~yG~~~d~~~k~hP~Lvpy~~L~e----~eK~~----- 71 (94)
T PF02026_consen 1 GYKPKPVDTSQVTLPPELEELIEKLAENEHDRWAKERIEQGWTYGEVRDDSRKTHPCLVPYDELSE----EEKEK----- 71 (94)
T ss_dssp C-----B-GTT----HHHHHHHHHHHHHHHHHHHHHHHHTT-BE-SSHBTTTTBETT-S-GGGS-H----HHHHH-----
T ss_pred CCcCCCcCcCCeecCHHHHHHHHHHHHHHHHHHHHHHHhccceeccccccCCCCCCCCcChhhCCH----HHHHH-----
Confidence 389999999999999999999999999999999999999999999999999999999999999999 43332
Q ss_pred ccccccccCCcchhhhhhhhhHHHhccceeecC
Q psy13309 834 SETSILFYHPPRVKFHAKVLPTILAIGYHISMD 866 (1568)
Q Consensus 834 ~e~~~~~Y~~~~~~~~~e~LktllalG~~i~~~ 866 (1568)
++.++.+++|+|+++||+|+..
T Consensus 72 -----------dr~~~~e~lk~l~~~Gy~i~~~ 93 (94)
T PF02026_consen 72 -----------DRDMVRETLKTLLALGYHIERA 93 (94)
T ss_dssp -----------HHHHHHHHHHHHHHTTEEEEE-
T ss_pred -----------hHHHHHHHHHHHHHcCcEEeeC
Confidence 4567888899999999999864
No 7
>PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum to discriminate between different types of neuronal activity []. ; PDB: 3UJ4_B 3UJ0_B 3T8S_B 3JRR_B 1XZZ_A 3ILA_B 3HSM_A 2XOA_A 3IM6_A 3IM7_A ....
Probab=99.82 E-value=7.5e-21 Score=212.00 Aligned_cols=90 Identities=49% Similarity=0.830 Sum_probs=77.0
Q ss_pred CccccCcC-cccccccceEEEeeCCCC-ceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccC------CCCce
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQG-EACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTK------ENDLS 72 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~-E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~------~~~~~ 72 (1568)
||+|++++ |+.||+||+|+|++ .++ |+|||+|+|+||+|+|||+|++||+|+|+++++++|||+|. ..++.
T Consensus 114 yL~~~~~~~s~~e~~~~~v~L~~-~~~~e~s~F~i~P~~k~r~~Gd~V~~gD~i~l~~~~~~~~Lh~s~~~~~~~~~~~~ 192 (214)
T PF08709_consen 114 YLTCNSTEPSEYEKNNFKVSLQE-FSSGENSWFRIHPAYKQRSEGDPVRYGDQIILISVSTEQYLHVSSNKSLSDNKGCK 192 (214)
T ss_dssp EEEEEEEEESSSSTTSEEEEEES-SSSSGGGEEEEEESSTTS-TTSB-BTT-EEEEEETTT-SEEEEEEEEEESSSSSCE
T ss_pred EEEEeCCCCCcccccceEEEecc-CCCcccEEEEEEcchheEcCCCeeeeCCEEEEEECCCCCcccccCccccccCCCce
Confidence 89999999 99999999999997 777 99999999999999999999999999999999999999772 24679
Q ss_pred EEEeeeceeeEEEEEeecc
Q psy13309 73 VVNASFHVTHWSVQPYGTG 91 (1568)
Q Consensus 73 EVnaS~~~T~WkI~lf~s~ 91 (1568)
||||++++|.|+|+||+++
T Consensus 193 eVn~~~~~T~w~i~~~~~~ 211 (214)
T PF08709_consen 193 EVNASFQQTSWKINPFMSY 211 (214)
T ss_dssp EEEESSS--EEEEEEEE-G
T ss_pred EEEEEccccceEEEEEeec
Confidence 9999999999999999553
No 8
>KOG2626|consensus
Probab=99.80 E-value=7e-20 Score=217.11 Aligned_cols=128 Identities=22% Similarity=0.390 Sum_probs=109.5
Q ss_pred ccceeEEeeccceeeecceeEEEEEEe---eCCceEEeeccCCCCCCCCCCCCCCceeEeCCcc---cc-ccCCCCCCCC
Q psy13309 996 FMSFRTYRAEKNYAVSSGKWYFEFEIL---TAGPMRVGWARVDCAPGAQLGSDENSWAFDGFNR---HI-KINLFQQDKK 1068 (1568)
Q Consensus 996 ~~~~R~~R~e~ty~v~~GkwYfEv~v~---t~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~---h~-~~~~yG~~w~ 1068 (1568)
...+|++|| |++|..|.|||||+|. +++.+|+||+++.+..+.+||+|++||+++..+| |. .+++|-..|+
T Consensus 316 eKGy~MvRA--shgv~~G~WYFEI~vd~~pd~~a~RlGwsq~~g~LqApvGYdkfsY~wRdk~GtKfh~s~gk~Y~~gf~ 393 (544)
T KOG2626|consen 316 EKGYRMVRA--SHGVLEGAWYFEIKVDEMPDDAAIRLGWSQLYGNLQAPVGYDKFSYGWRDKKGTKFHESLGKHYSDGFG 393 (544)
T ss_pred ccceeeeee--cccccccceeEEEEeecCCCccceeeeccccccccccccccccccccccccCCcchhhhhhhhhhhhcc
Confidence 347888888 9999999999999996 4789999999999999999999999999987666 65 3789999999
Q ss_pred CCceEE-------------------------------------------------------EEeCCccccccCCCccccc
Q psy13309 1069 DYSISG-------------------------------------------------------FSLNGELLMDALGGETTFA 1093 (1568)
Q Consensus 1069 ~GDVvG-------------------------------------------------------F~lNG~~l~~~~g~g~AF~ 1093 (1568)
.|||+| |++||.. +|+||.
T Consensus 394 qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d~v~k~~k~l~~~pgS~I~f~KNG~~------qG~Ay~ 467 (544)
T KOG2626|consen 394 QGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDPDNVAKIEKTLKIKPGSEIEFFKNGVS------QGVAYE 467 (544)
T ss_pred CCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEccchhhhhhhccccCCCceEEEeecccc------hhhhhh
Confidence 999999 5555554 489999
Q ss_pred cccC-CccceeeeecCCcEEEEEeCCCccccccccccCCCCCccc
Q psy13309 1094 DVQG-EGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGLQEGYEP 1137 (1568)
Q Consensus 1094 di~~-~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~qeg~~p 1137 (1568)
||.+ ++||||+|+..++.|+||||+. |||+ +..-|++|
T Consensus 468 ni~~~G~YyPaIS~yks~tv~~nfGP~---F~~~---p~~lg~~~ 506 (544)
T KOG2626|consen 468 NIYKAGAYYPAISIYKSCTVKFNFGPQ---FRYP---PCVLGNRA 506 (544)
T ss_pred hhhccccccceeeecccceEEEecccc---ccCC---ccccCCCc
Confidence 9984 6699999999999999999996 8986 33444454
No 9
>PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2.4.1.109 from EC), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies. Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules []. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) []. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.; GO: 0016020 membrane; PDB: 1T9F_A 3UJ4_B 3UJ0_B 3T8S_B 3MAL_B 2XOA_A 1N4K_A.
Probab=99.79 E-value=3.3e-19 Score=195.44 Aligned_cols=167 Identities=26% Similarity=0.415 Sum_probs=119.6
Q ss_pred ccccCCCCCCCcEEEEccCCCC---ccCc---cccceeEEEEecCccccCCcceEEEee-cccccCCccceecCceEEEE
Q psy13309 103 VMSCGSSTEVTNVSLYLHPGLI---CPDR---SKYLFHIVVYEGGSVMSQARSLWRLEL-ARTKWAGGFINWYHPMRIRH 175 (1568)
Q Consensus 103 ~yLkG~~lr~GDVVRLfH~E~~---~~~~---~~~~~~v~~~e~g~~~tsa~sLWeIE~-~~~~~~GG~v~Wgq~fRLRH 175 (1568)
|||.+ |||+|++|+++. ++.. ....++.+.|+.|...+++++||+||. ...++.||.++||+.|||||
T Consensus 1 g~Lhs-----hd~~y~~~s~qqqvt~~~~~d~nn~~~~~~~~~~~~~~~~~~slW~IE~~~~~~~~g~~v~~g~~iRL~H 75 (190)
T PF02815_consen 1 GYLHS-----HDVIYPFHSEQQQVTTYPHNDDNNEFRRTVNRESGAVATSANSLWQIEPVSEDPWSGGPVKWGDVIRLRH 75 (190)
T ss_dssp TCEEC-----CEEEEEEETTTCEEEEEEESSTGCCEEEBEESSSGGGGGSGGGEEEEEE-TSSTTTTSB-BTTSEEEEEE
T ss_pred CeeEE-----EeeCCCCCCCcceEEEECccCCCccccceeeeeccccccccccceEEecCCCCcccCCcccCCCEEEEEE
Confidence 46677 899999999954 2221 122556788888999999999999999 55678999999999999999
Q ss_pred cCCCceeeeeecCccccccccccCCCCcceEeecc----ccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEe
Q psy13309 176 LTTGRYLSTNENNELYLVTRDEATTASSTFCLRQE----KDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTY 251 (1568)
Q Consensus 176 LtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~----ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~ 251 (1568)
++||+||.+.++.. -+....+.+.+.+.|++... ++....+......++|+...++.++|+|||+|+.||.||++
T Consensus 76 ~~Tg~yL~~~~~~~-p~s~~~~~~~evs~~~~~~~~~d~~d~~~~i~~~~~~~~~~~~~~~~~~s~frL~H~~t~~~L~~ 154 (190)
T PF02815_consen 76 LSTGKYLHSHDVKS-PISETDDYNQEVSCFGDDDIPGDANDDKVEIFEEKSSTGMGEDEIKTLDSYFRLRHVATGCWLHS 154 (190)
T ss_dssp TTTS-EEEEEEEEE-CCCTCGG-SEEEEEEEEECESSS-SSG-GGEEEEEESSSCSSSSBBBTTSEEEEEETTTTEEEEE
T ss_pred ccCCCEEEEccccc-ccccccccCcceeeEeeccccCCccccceeEEEecccCCccCCcEEecccEEEEEECCcCEEEec
Confidence 99999999998652 12222233455678888765 22200112233344677888999999999999999999999
Q ss_pred eecccccccCChhhhhceEecccccc
Q psy13309 252 KSYETKKKGLGKVEEKQAVLHEEGKM 277 (1568)
Q Consensus 252 ~~~~~~~~~~~~~e~~k~il~~~g~~ 277 (1568)
..... -.|+..+...+++.+.+++
T Consensus 155 ~~~~l--p~wg~~q~Ev~~~~~~~~~ 178 (190)
T PF02815_consen 155 HDVKL--PEWGFGQQEVACMKKSGTM 178 (190)
T ss_dssp EEEES---TTTTTSCEEEEEEEEEEE
T ss_pred CCccc--ccccccccEEeeecCCCce
Confidence 97665 3456555557888877776
No 10
>KOG0349|consensus
Probab=99.73 E-value=5.7e-18 Score=194.80 Aligned_cols=146 Identities=22% Similarity=0.410 Sum_probs=114.7
Q ss_pred ceeee-cceeEEEEEEeeCCceEEeeccCCCCCCCCCCCCCCceeEeCC--cccc-ccCCCCCCCCCCceEE--------
Q psy13309 1007 NYAVS-SGKWYFEFEILTAGPMRVGWARVDCAPGAQLGSDENSWAFDGF--NRHI-KINLFQQDKKDYSISG-------- 1074 (1568)
Q Consensus 1007 ty~v~-~GkwYfEv~v~t~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~--~~h~-~~~~yG~~w~~GDVvG-------- 1074 (1568)
|-++. +||+||||++.+.|++||||||..++.+ +|.+..+|+|.|+ ++|+ .+++||++|+-.||||
T Consensus 123 T~Gl~gkGK~YyEvtitd~GLCRVGWsT~qasLd--lGt~~~gFGfGGTGkKS~nkqFDdYGe~Ft~~DvIGCyLDld~~ 200 (725)
T KOG0349|consen 123 TAGLYGKGKYYYEVTITDKGLCRVGWSTLQASLD--LGTGLDGFGFGGTGKKSTNKQFDDYGEPFTLNDVIGCYLDLDSR 200 (725)
T ss_pred ccccccCceEEEEEEeccCceeeechhhcccccc--cCccccccccCccCccccccccccccCcccccceeeEEEeccCc
Confidence 66666 8999999999999999999999998776 8999999999887 4554 6999999999999999
Q ss_pred ---EEeCCccccccCCCcccccccc---CCccceeeeecCCcEEEEEeCCCccccccccccCCCCCcccccccccc----
Q psy13309 1075 ---FSLNGELLMDALGGETTFADVQ---GEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGLQEGYEPFCVNMKR---- 1144 (1568)
Q Consensus 1075 ---F~lNG~~l~~~~g~g~AF~di~---~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~qeg~~p~~~~~~~---- 1144 (1568)
|++||+.| |.||..-. ...+||||-|...+ ..||||..+ |||+ +-.||...+..-+.
T Consensus 201 ~v~fsKNG~~l------g~AF~ip~~~kn~~lfPAvvlkNae-l~fNFG~~~--FKfp----PgngFva~s~Ap~e~~~~ 267 (725)
T KOG0349|consen 201 TVWFSKNGEQL------GAAFSIPVKYKNSNLFPAVVLKNAE-LSFNFGSQP--FKFP----PGNGFVAVSDAPNEHSKA 267 (725)
T ss_pred eEEEecCcccc------ceeEEcChhhcccccchheeeccce-EEEecCCCc--cccC----CCCceEEeecCCcccccc
Confidence 99999998 79998643 67899999888877 799999998 9994 56778777655444
Q ss_pred cchhhhcccccceeecCCCCCce
Q psy13309 1145 AVTYWYTRDQPIFENTDDYPSVI 1167 (1568)
Q Consensus 1145 ~~~~w~~~~~~~f~~~~~~~~~~ 1167 (1568)
.+.-|-.-..|+=.+.|....++
T Consensus 268 n~~~g~~a~~~~~k~~pNap~av 290 (725)
T KOG0349|consen 268 NVNWGSYAEAPSAKPAPNAPEAV 290 (725)
T ss_pred CccccccccCcccccCCCCccee
Confidence 33333234445544444333333
No 11
>KOG0349|consensus
Probab=99.69 E-value=1.2e-16 Score=184.12 Aligned_cols=127 Identities=21% Similarity=0.343 Sum_probs=108.8
Q ss_pred CceeEeecCCCccccccceecc----cccccccCCCCccccccccccCCccccccCCccccCCccccccCCCCCCCcccC
Q psy13309 572 NNICDYLLPGKNLLLQTQLVDH----VASYVPYPGGGEKWGGNGVGDDLYSFGFDGAHLWTGGRRTEVIPGTLEPYIKKG 647 (1568)
Q Consensus 572 ~~~~~~~lp~~~lllqT~~v~~----~~~~~p~~~~g~~~gg~gvGdd~~S~gfDG~~~w~~~~~~~~~~~~~~~~~~~G 647 (1568)
+.++|||+ .+.. -.||++.- ++-.+|++.++|||+|++++++++.+ +.||..++..
T Consensus 129 kGK~YyEv----------titd~GLCRVGWsT~q------asLdlGt~~~gFGfGGTGkKS~nkqF----DdYGe~Ft~~ 188 (725)
T KOG0349|consen 129 KGKYYYEV----------TITDKGLCRVGWSTLQ------ASLDLGTGLDGFGFGGTGKKSTNKQF----DDYGEPFTLN 188 (725)
T ss_pred CceEEEEE----------EeccCceeeechhhcc------cccccCccccccccCccCcccccccc----ccccCccccc
Confidence 56788888 2221 11677643 35679999999999999999998864 5999999999
Q ss_pred CEEEEeeeCCCCeEEEeeCCcccccccccccC--CCcceeeeeccCCcceEEeecCCcCCcccCCCCCChhhhhcc
Q psy13309 648 DVIGVALDLSIPIITFTFNGSLVSGAFRDFNL--DGMFFPVISCSSKLSCRFLFGGDHGRLKYIPPEEFSPLVESL 721 (1568)
Q Consensus 648 DviGc~lDl~~g~isF~~NG~~vg~~f~~~~~--dg~~fpavS~~~~~~~~fnfGg~~~~fk~~Pp~g~~p~~~a~ 721 (1568)
|||||.|||+.++|+|++||..+|.||+.... +..+|||| ++..++..||||.+ ||||+|..||.+++.|.
T Consensus 189 DvIGCyLDld~~~v~fsKNG~~lg~AF~ip~~~kn~~lfPAv-vlkNael~fNFG~~--~FKfpPgngFva~s~Ap 261 (725)
T KOG0349|consen 189 DVIGCYLDLDSRTVWFSKNGEQLGAAFSIPVKYKNSNLFPAV-VLKNAELSFNFGSQ--PFKFPPGNGFVAVSDAP 261 (725)
T ss_pred ceeeEEEeccCceEEEecCccccceeEEcChhhcccccchhe-eeccceEEEecCCC--ccccCCCCceEEeecCC
Confidence 99999999999999999999999999997643 46899998 67889999999999 99999999999999965
No 12
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=99.62 E-value=1.8e-15 Score=153.11 Aligned_cols=103 Identities=33% Similarity=0.520 Sum_probs=89.5
Q ss_pred cceeEEEEEEeeCCceEEeeccCCC---CCCCCCCCCCCceeEeCCcc---ccc-cCCCCCCCCC-CceEE---------
Q psy13309 1012 SGKWYFEFEILTAGPMRVGWARVDC---APGAQLGSDENSWAFDGFNR---HIK-INLFQQDKKD-YSISG--------- 1074 (1568)
Q Consensus 1012 ~GkwYfEv~v~t~G~mrvGWa~~~~---~~~~~vG~D~~Sy~fdG~~~---h~~-~~~yG~~w~~-GDVvG--------- 1074 (1568)
+|+|||||+|.+.+.++|||++..+ .....+|++..||+|++..+ |.+ .+.++.+|+. |||||
T Consensus 1 sG~~YwEV~v~~~~~~~iGv~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dvIG~~lD~~~g~ 80 (124)
T PF00622_consen 1 SGKHYWEVEVDSGGSISIGVATSSASVSGDENLSGYDPFSWGFHGDGGKKYHGGTSEETGSPFQEPGDVIGCGLDLDNGE 80 (124)
T ss_dssp SSEEEEEEEETGGCTEEEEEEETTSEESSSTS-TTSSTTEEEEETTTTTEEESTSSSECSCTSSTTTSEEEEEEETTTTE
T ss_pred CcCEEEEEEEecCcCEEEEEeECccccCCccccCCccccceeeeccccccceeecccccccccccCCcEEEEEEeecccE
Confidence 6999999999999999999999999 45667999999999998874 443 5889999998 99999
Q ss_pred --EEeCCccccccCCCc-ccccccc-CCccceeeeecCCcEEEEEeCCCc
Q psy13309 1075 --FSLNGELLMDALGGE-TTFADVQ-GEGFVPACTLGVGQRAKLTFGQDV 1120 (1568)
Q Consensus 1075 --F~lNG~~l~~~~g~g-~AF~di~-~~~~~Pa~SL~~~q~~~~NfG~~~ 1120 (1568)
|++||+.+ + .+|+++. ...+|||++|..++.+++|||++|
T Consensus 81 l~F~~ng~~~------~~~~f~~~~~~~~l~P~v~~~~~~~~~~n~g~~~ 124 (124)
T PF00622_consen 81 LSFYKNGKFL------GIYAFTDIDFSEPLYPAVSLGGGQSVELNFGQRP 124 (124)
T ss_dssp EEEEETTEEE------EEEEEESCTTSSSBEEEEEEESTSEEEEEEEC--
T ss_pred EEEEECCccc------eeEEEECCCCCCcEEEEEEecCCCEEEEEeCCCC
Confidence 99999987 4 8999887 468999999999999999999975
No 13
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=99.59 E-value=4.5e-15 Score=150.43 Aligned_cols=102 Identities=36% Similarity=0.567 Sum_probs=89.9
Q ss_pred cceeEEEEEEeeCCceEEeeccCCCC--CCCCCCCCCCceeEeCCcc---ccc-cCCCCCCCCC-CceEE----------
Q psy13309 1012 SGKWYFEFEILTAGPMRVGWARVDCA--PGAQLGSDENSWAFDGFNR---HIK-INLFQQDKKD-YSISG---------- 1074 (1568)
Q Consensus 1012 ~GkwYfEv~v~t~G~mrvGWa~~~~~--~~~~vG~D~~Sy~fdG~~~---h~~-~~~yG~~w~~-GDVvG---------- 1074 (1568)
+|+|||||+|.+.+.++||||+..+. .+..+|+|+.||+|++..+ |++ .++|+.+|+. ||+||
T Consensus 1 sG~~YwEV~v~~~~~~~vGv~~~~~~r~~~~~~G~~~~sw~~~~~~g~~~~~~~~~~~~~~~~~~gd~iGv~lD~~~g~l 80 (122)
T smart00449 1 SGRHYFEVEIFDGGHWRVGVATKSVPRGYFALLGEDKGSWGYDGDGGKKYHNSTGPEYGLPLQEPGDVIGCFLDLEAGTI 80 (122)
T ss_pred CCcEEEEEEEcCCCeEEEEEEcCccCCCccccCCCCCCEEEEEcCCCcEEeCCCCCccCccccCCCCEEEEEEECCCCEE
Confidence 69999999999999999999999987 5778999999999998875 443 4689999996 99999
Q ss_pred -EEeCCccccccCCCcccccccc-CCccceeeeecCCcEEEEEeCC
Q psy13309 1075 -FSLNGELLMDALGGETTFADVQ-GEGFVPACTLGVGQRAKLTFGQ 1118 (1568)
Q Consensus 1075 -F~lNG~~l~~~~g~g~AF~di~-~~~~~Pa~SL~~~q~~~~NfG~ 1118 (1568)
|++||+.+. +.||.++. .+.+|||+|+..++.+++|||+
T Consensus 81 ~F~~ng~~~~-----~~~f~~~~~~~~l~P~~~~~~~~~~~~n~g~ 121 (122)
T smart00449 81 SFYKNGKYLH-----GLAFFDVKFSGPLYPAVSLGSGCSVRLNFGP 121 (122)
T ss_pred EEEECCCEee-----eEEEeccCCCCcEeeEEEcCCCCEEEEEecC
Confidence 899999872 58998876 5689999999999999999997
No 14
>PF00622 SPRY: SPRY domain; InterPro: IPR003877 The SPRY domain is of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin []. Ca2+-release from the sarcoplasmic or endoplasmic reticulum, the intracellular Ca2+ store, is mediated by the ryanodine receptor (RyR) and/or the inositol trisphosphate receptor (IP3R).; GO: 0005515 protein binding; PDB: 2V24_A 3EK9_A 2AFJ_A 2IWG_E 3EMW_A 2WL1_A 3TOJ_B 2VOK_A 2VOL_B 2FNJ_A ....
Probab=99.16 E-value=8.6e-11 Score=118.95 Aligned_cols=101 Identities=28% Similarity=0.455 Sum_probs=82.6
Q ss_pred cccccCCCCccccccccccCCccccccCC--ccccCCccccccCCCCCCCccc-CCEEEEeeeCCCCeEEEeeCCcccc-
Q psy13309 596 SYVPYPGGGEKWGGNGVGDDLYSFGFDGA--HLWTGGRRTEVIPGTLEPYIKK-GDVIGVALDLSIPIITFTFNGSLVS- 671 (1568)
Q Consensus 596 ~~~p~~~~g~~~gg~gvGdd~~S~gfDG~--~~w~~~~~~~~~~~~~~~~~~~-GDviGc~lDl~~g~isF~~NG~~vg- 671 (1568)
|+++... ..++....+|++..||+|.+. .+|++.... .+...+.. ||+|||+||++.++|+|++||+.++
T Consensus 19 Gv~~~~~-~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dvIG~~lD~~~g~l~F~~ng~~~~~ 92 (124)
T PF00622_consen 19 GVATSSA-SVSGDENLSGYDPFSWGFHGDGGKKYHGGTSE-----ETGSPFQEPGDVIGCGLDLDNGELSFYKNGKFLGI 92 (124)
T ss_dssp EEEETTS-EESSSTS-TTSSTTEEEEETTTTTEEESTSSS-----ECSCTSSTTTSEEEEEEETTTTEEEEEETTEEEEE
T ss_pred EEeECcc-ccCCccccCCccccceeeeccccccceeeccc-----ccccccccCCcEEEEEEeecccEEEEEECCcccee
Confidence 5555433 224567789999999999988 578777652 45667777 9999999999999999999999999
Q ss_pred cccccccCCCcceeeeeccCCcceEEeecCC
Q psy13309 672 GAFRDFNLDGMFFPVISCSSKLSCRFLFGGD 702 (1568)
Q Consensus 672 ~~f~~~~~dg~~fpavS~~~~~~~~fnfGg~ 702 (1568)
.+|+...+.+.+||+|++..+.++++|||.+
T Consensus 93 ~~f~~~~~~~~l~P~v~~~~~~~~~~n~g~~ 123 (124)
T PF00622_consen 93 YAFTDIDFSEPLYPAVSLGGGQSVELNFGQR 123 (124)
T ss_dssp EEEESCTTSSSBEEEEEEESTSEEEEEEEC-
T ss_pred EEEECCCCCCcEEEEEEecCCCEEEEEeCCC
Confidence 8888888878999999999999999999987
No 15
>smart00449 SPRY Domain in SPla and the RYanodine Receptor. Domain of unknown function. Distant homologues are domains in butyrophilin/marenostrin/pyrin homologues.
Probab=99.08 E-value=4e-10 Score=114.33 Aligned_cols=88 Identities=33% Similarity=0.498 Sum_probs=76.5
Q ss_pred ccccccCCccccccCC--ccccCCccccccCCCCCCCccc-CCEEEEeeeCCCCeEEEeeCCccc-ccccccccCCCcce
Q psy13309 609 GNGVGDDLYSFGFDGA--HLWTGGRRTEVIPGTLEPYIKK-GDVIGVALDLSIPIITFTFNGSLV-SGAFRDFNLDGMFF 684 (1568)
Q Consensus 609 g~gvGdd~~S~gfDG~--~~w~~~~~~~~~~~~~~~~~~~-GDviGc~lDl~~g~isF~~NG~~v-g~~f~~~~~dg~~f 684 (1568)
...+|.+.+||+|++. .+|+++.. ..++..++. ||+|||+||++.|+|+|+.||+.+ +.+|....+++.+|
T Consensus 30 ~~~~G~~~~sw~~~~~~g~~~~~~~~-----~~~~~~~~~~gd~iGv~lD~~~g~l~F~~ng~~~~~~~f~~~~~~~~l~ 104 (122)
T smart00449 30 FALLGEDKGSWGYDGDGGKKYHNSTG-----PEYGLPLQEPGDVIGCFLDLEAGTISFYKNGKYLHGLAFFDVKFSGPLY 104 (122)
T ss_pred cccCCCCCCEEEEEcCCCcEEeCCCC-----CccCccccCCCCEEEEEEECCCCEEEEEECCCEeeeEEEeccCCCCcEe
Confidence 4569999999999987 57776553 256777776 999999999999999999999999 78999999889999
Q ss_pred eeeeccCCcceEEeecC
Q psy13309 685 PVISCSSKLSCRFLFGG 701 (1568)
Q Consensus 685 pavS~~~~~~~~fnfGg 701 (1568)
|++|+..+..+++|||.
T Consensus 105 P~~~~~~~~~~~~n~g~ 121 (122)
T smart00449 105 PAVSLGSGCSVRLNFGP 121 (122)
T ss_pred eEEEcCCCCEEEEEecC
Confidence 99999888899999984
No 16
>KOG3533|consensus
Probab=98.53 E-value=6e-07 Score=114.15 Aligned_cols=163 Identities=17% Similarity=0.289 Sum_probs=133.0
Q ss_pred HHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHH
Q psy13309 329 LNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDI 408 (1568)
Q Consensus 329 l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~ 408 (1568)
...|.+.|..|..+|..... -+|.+..|.|||+.|+.+.++++|.-+ |.... .+.-.+
T Consensus 1201 Yr~vkeiLiRl~k~Cv~~~~----------~k~rk~~QrLLkNmg~h~VvLdllqiP--ydkk~----------D~~M~e 1258 (2706)
T KOG3533|consen 1201 YRLVKEILIRLTKMCVRKGD----------PKPRKMNQRLLKNMGVHEVVLELLQIP--YDKKH----------DHKMME 1258 (2706)
T ss_pred hHHHHHHHHHHHHHHhhCCC----------CCccHHHHHHHHhcchHHHHHHHHhCc--ccccc----------hHHHHH
Confidence 44578889999999975211 257778899999999999999999543 21111 124577
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHH--HHHHHHHhCCHHHHhhccHHHHHHHHHHHH
Q psy13309 409 ISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGML--DVLHCVLIDSPEALNMMRDEHIKVIISLLE 486 (1568)
Q Consensus 409 I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gil--dvL~~lL~nN~elLn~I~e~hI~~fIsLL~ 486 (1568)
+.++.-+.|+.+|+||..||...- . ||+++. . -|+| +|+.+|+.||.++-+.|.|.-|.+|+-+++
T Consensus 1259 lm~laHeFLqnFC~gN~qNQ~lLh-k-hi~lfl---~-------pG~LEa~Tm~~IF~nN~~Lcsev~e~vvqHfVh~ie 1326 (2706)
T KOG3533|consen 1259 LMTLAHEFLQNFCKGNKQNQSLLH-K-HISLFL---D-------PGMLEAGTMVAIFRNNRELCSEVPEEVVQHFVHLIE 1326 (2706)
T ss_pred HHHHHHHHHHHHhcCCchhHHHHH-H-HHHhhc---C-------cchhhHHHHHHHHHhhHHHHhhCcHHHHHHHHHHHH
Confidence 999999999999999999997432 2 344332 1 2477 789999999999999999999999999999
Q ss_pred HcCCCchhhhhhccccccCCcccccchHHHHhhhcCCCC
Q psy13309 487 KHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKN 525 (1568)
Q Consensus 487 k~~r~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~~~~ 525 (1568)
.|||+..||+||-.+---.|+-|.+-|+.+-..|....+
T Consensus 1327 ~hgR~v~yl~fLqt~Vkae~k~ikkcQdmVm~El~nagd 1365 (2706)
T KOG3533|consen 1327 THGRNVIYLEFLQTLVKAEGKEIKKCQDMVMNELCNAGD 1365 (2706)
T ss_pred HcCcCHHHHHHHHHHHHhcchHHHHHHHHHHHHHhcCCC
Confidence 999999999999999989999999999999999997644
No 17
>KOG4030|consensus
Probab=98.50 E-value=5.4e-07 Score=93.01 Aligned_cols=118 Identities=22% Similarity=0.349 Sum_probs=91.1
Q ss_pred ceeeecceeEEEEEEeeCCceEEeeccCCCCCC-CCCCCCCCceeEeCCc--cccccCCCC---CCC-CCCceEE-----
Q psy13309 1007 NYAVSSGKWYFEFEILTAGPMRVGWARVDCAPG-AQLGSDENSWAFDGFN--RHIKINLFQ---QDK-KDYSISG----- 1074 (1568)
Q Consensus 1007 ty~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~-~~vG~D~~Sy~fdG~~--~h~~~~~yG---~~w-~~GDVvG----- 1074 (1568)
|...-.-|=||||+|...|.-.||.|+....++ .+.|-|..||+..... .|+..+.+- ..+ .+|||||
T Consensus 58 taPlvQnKsYFevkiQ~tG~WgiGlat~q~~l~~~p~g~d~~sw~~r~dga~~hnnee~~r~pa~~~p~EGDvVGvayDH 137 (197)
T KOG4030|consen 58 TAPLVQNKSYFEVKIQQTGTWGIGLATKQSPLDKVPGGCDEKSWGIRDDGAIAHNNEEVARMPATVFPEEGDVVGVAYDH 137 (197)
T ss_pred eeeeecccceEEEEEeecceeeeeeeeccCccccCCCCCcceeEEEccCCchhcccHHHhcCccccCCccCcEEEEEeee
Confidence 444556688999999999999999999999885 5689999999986554 476422221 222 6899999
Q ss_pred ----EEeCCccccccCCCccccccccCCccceeeeecCCcEEEEEeCCCccccccccccCCCCCccccc
Q psy13309 1075 ----FSLNGELLMDALGGETTFADVQGEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGLQEGYEPFC 1139 (1568)
Q Consensus 1075 ----F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~qeg~~p~~ 1139 (1568)
|++||+.+ +.-|+.+++ ..||++-+..+....+-|-. |- -+++.||+-+-
T Consensus 138 VELnfY~NGKn~------e~p~~gvRG-~vyPvvYVddsAILD~~f~n----F~----h~PPpGFe~IL 191 (197)
T KOG4030|consen 138 VELNFYVNGKNV------EDPITGVRG-PVYPVVYVDDSAILDLKFKN----FT----HAPPPGFEEIL 191 (197)
T ss_pred EEEEEEEcCcee------ccccccccc-ceeeEEEeCCceEEEEEecc----cc----cCCCCChhhee
Confidence 99999988 677888866 78999999999988887754 32 26678887653
No 18
>KOG2626|consensus
Probab=98.27 E-value=1.2e-06 Score=105.95 Aligned_cols=92 Identities=26% Similarity=0.465 Sum_probs=72.1
Q ss_pred ccccCCccccccCC--ccccCCccccccCCCCCCCcccCCEEEEeeeCCCC-----------------------------
Q psy13309 611 GVGDDLYSFGFDGA--HLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIP----------------------------- 659 (1568)
Q Consensus 611 gvGdd~~S~gfDG~--~~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~~g----------------------------- 659 (1568)
=||-|.+||++--. .|.|-.. -.+|..-++.|||+||++.|-++
T Consensus 362 pvGYdkfsY~wRdk~GtKfh~s~-----gk~Y~~gf~qGDvLGf~I~LP~~~~~~~~lp~~~kdk~lI~yK~~lyfe~~d 436 (544)
T KOG2626|consen 362 PVGYDKFSYGWRDKKGTKFHESL-----GKHYSDGFGQGDVLGFYINLPKDLSPEKYLPLTHKDKFLIKYKGHLYFEDPD 436 (544)
T ss_pred ccccccccccccccCCcchhhhh-----hhhhhhhccCCceEEEEEecCCcccccccCCccccccceeeeeeeeEEEccc
Confidence 48899999875333 2222111 23677789999999999987332
Q ss_pred ---------------eEEEeeCCcccccccccccCCCcceeeeeccCCcceEEeecCCcCCcccCC
Q psy13309 660 ---------------IITFTFNGSLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDHGRLKYIP 710 (1568)
Q Consensus 660 ---------------~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~~~~~fnfGg~~~~fk~~P 710 (1568)
+|.|.+||+..|.||+++.-.|.|||||||=....++||||-. |+|+|
T Consensus 437 ~v~k~~k~l~~~pgS~I~f~KNG~~qG~Ay~ni~~~G~YyPaIS~yks~tv~~nfGP~---F~~~p 499 (544)
T KOG2626|consen 437 NVAKIEKTLKIKPGSEIEFFKNGVSQGVAYENIYKAGAYYPAISIYKSCTVKFNFGPQ---FRYPP 499 (544)
T ss_pred hhhhhhhccccCCCceEEEeecccchhhhhhhhhccccccceeeecccceEEEecccc---ccCCc
Confidence 4678899999999999988789999999999999999999955 88865
No 19
>PF01365 RYDR_ITPR: RIH domain; InterPro: IPR000699 Ryanodine and Inositol 1,4,5-trisphosphate (IP3) receptors are intracellular Ca2+-release channels. They become activated upon binding of their respective ligands, Ca2+ and IP3, opening an intrgral Ca2+ channel. Ryanodine receptor activation is a key component of muscular contraction, their activation allowing release of Ca2+ from the sarcoplasmic reticulum. Mutations in the ryanodine receptor lead to malignant hyperthermia susceptibility the and central core disease of muscle.; GO: 0005262 calcium channel activity, 0070588 calcium ion transmembrane transport, 0016020 membrane; PDB: 1N4K_A 2XOA_A 3UJ0_B 3UJ4_A 3T8S_A.
Probab=98.01 E-value=1.5e-06 Score=97.14 Aligned_cols=120 Identities=35% Similarity=0.517 Sum_probs=18.3
Q ss_pred HHHHHHHhCCHHHHhhccHHHHHHHHHHHHHc--CCCchhhhhhccccccCCcccccchHHHHhhhcCCCCcceeeeccc
Q psy13309 457 DVLHCVLIDSPEALNMMRDEHIKVIISLLEKH--GRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDE 534 (1568)
Q Consensus 457 dvL~~lL~nN~elLn~I~e~hI~~fIsLL~k~--~r~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL~~~~lll~T~~v~ 534 (1568)
..|.....+|++--. .-.+|+.++++.+... +.+...+|+|+ ..+-++.. ++....+.
T Consensus 83 ~lL~~f~~~n~~NQ~-~l~~~~~~l~~~~~~~~~~~~~~~~d~l~------------------~i~~dN~~-L~~~i~e~ 142 (207)
T PF01365_consen 83 RLLRQFCRGNRENQK-YLFKHLDFLISIFMQLQIGYGLGALDVLT------------------EIFRDNPE-LCESISEE 142 (207)
T ss_dssp HHHHHHHTT-HHHHH-HHHHHHH-----HHCCCH-TTHHHHHHHH------------------HHHTT------------
T ss_pred HHHHHHHHhCHHHHH-HHHHHHhHHHHHHHHhhccCCchHHHHHH------------------HHHHCcHH-HHHHhhHH
Confidence 667777777775332 2234566555555431 11222344443 22222233 33344577
Q ss_pred ceehhhhhhhhhCCCCccceeecceeecccccccccCCcee-EeecCCC-ccccccceeccccc
Q psy13309 535 HIKVIISLLEKHGRDPKVLDVLCSLCVGNGVAVRSSQNNIC-DYLLPGK-NLLLQTQLVDHVAS 596 (1568)
Q Consensus 535 hi~s~i~~lek~gr~p~vl~vlcslcv~~G~a~~s~q~~~~-~~~lp~~-~lllqT~~v~~~~~ 596 (1568)
||..+++++.+|||+|+.|++|+++|+++|.+++++|+.|+ .+++|++ ||+++|.+++++..
T Consensus 143 ~I~~~i~ll~~~gr~~~~L~~L~~lc~~~g~pI~~nQ~lI~~~ll~~~~~dll~~~~~~~~~~~ 206 (207)
T PF01365_consen 143 HIEKFIELLRKHGRQPRYLDFLSSLCVCNGNPIPENQNLICQELLLEGEADLLVFTNDRKPECS 206 (207)
T ss_dssp ----------------------------------------------------------------
T ss_pred HHHHHHHHHHHcCCChHHHHHHhhhcccCCcCCHHHHHHHHHHHcCCCCccEEEEeeccccccc
Confidence 89999999999999999999999999999999999999999 8888999 99999999988654
No 20
>KOG4367|consensus
Probab=97.88 E-value=4.4e-05 Score=89.54 Aligned_cols=107 Identities=20% Similarity=0.367 Sum_probs=86.4
Q ss_pred ceeeecceeEEEEEEee-C--CceEEeeccCCCCCCCCCCCCCCceeE--eCCcc---cccc---CCCCCCCCCCceEE-
Q psy13309 1007 NYAVSSGKWYFEFEILT-A--GPMRVGWARVDCAPGAQLGSDENSWAF--DGFNR---HIKI---NLFQQDKKDYSISG- 1074 (1568)
Q Consensus 1007 ty~v~~GkwYfEv~v~t-~--G~mrvGWa~~~~~~~~~vG~D~~Sy~f--dG~~~---h~~~---~~yG~~w~~GDVvG- 1074 (1568)
+.+.+.|..||||+|-- + ..+-||-|++...-+..+|-|.++|+. ||.|. |+.. ...| -...|.|||
T Consensus 568 siafskgvhywevtidrhdgnsdivigvaqpavnrnvmlgkdlhgwsmyvdgerswylhnethhnrvlg-gvtrgtvigv 646 (699)
T KOG4367|consen 568 SIAFSKGVHYWEVTIDRHDGNSDIVIGVAQPAVNRNVMLGKDLHGWSMYVDGERSWYLHNETHHNRVLG-GVTRGTVIGV 646 (699)
T ss_pred ecccccceeEEEEEEeccCCCCCceEEecchhhhhceeecccccceeEEEcCcceeEEecccccccccc-ccccccEEEE
Confidence 67889999999999964 3 468899999999999999999999994 88887 5521 1111 246899999
Q ss_pred ----------EEeCCccccccCCCccccccccCCccceeeeecCCcEEEEEeCCCc
Q psy13309 1075 ----------FSLNGELLMDALGGETTFADVQGEGFVPACTLGVGQRAKLTFGQDV 1120 (1568)
Q Consensus 1075 ----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~~q~~~~NfG~~~ 1120 (1568)
|++|.+- ...+||+++ .+.||||+|+..+-++.+.-|-..
T Consensus 647 rldcdrgtmeytvndrq-----ddsmaftnm-rglyypafsvnanssitvhtglss 696 (699)
T KOG4367|consen 647 RLDCDRGTMEYTVNDRQ-----DDSMAFTNM-RGLYYPAFSVNANSSITVHTGLSS 696 (699)
T ss_pred EEeccCCceEEEecccc-----CCceeeecc-cceeeeeeEeccCceEEEecCCCC
Confidence 8888772 236899998 667999999999999999988643
No 21
>KOG1477|consensus
Probab=97.40 E-value=0.00021 Score=88.72 Aligned_cols=111 Identities=20% Similarity=0.293 Sum_probs=94.5
Q ss_pred eccceeeecceeEEEEEEee---CCceEEeeccCCCCCCCCCCCCCCceeEeCCcc--cc----ccCCCCCCCCCCceEE
Q psy13309 1004 AEKNYAVSSGKWYFEFEILT---AGPMRVGWARVDCAPGAQLGSDENSWAFDGFNR--HI----KINLFQQDKKDYSISG 1074 (1568)
Q Consensus 1004 ~e~ty~v~~GkwYfEv~v~t---~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~--h~----~~~~yG~~w~~GDVvG 1074 (1568)
+.+.-....|..||||-|+. .|.+-||.....+..+...|+-..|++|.|..+ +. .++.||++++.||.||
T Consensus 70 ~~~~~~~N~~~~~Fe~~i~d~g~~~~i~i~~~~~~~~~~~~~g~~~~s~~y~g~~g~l~~~~~~~~~~~~~~~~~~D~ig 149 (469)
T KOG1477|consen 70 AGEPLPANFGIYYFEFDILDYGIEGRIKIGFLIDSFSIIESEGYTMNSLGYHGNSGLLDNGGAELGEEFGPTFTTGDEIG 149 (469)
T ss_pred CCCCCCcccccceeeeeHHHhhhhhceEEEEEecccccccccchhhhhhcccCCchhhhhhhhhhchhhcCCCCccceee
Confidence 33334444689999999996 678999999999999999999999999999987 33 3789999999999999
Q ss_pred -----------EEeCCccccccCCCccccccccCCccce----eeeecCCcEEEEEeC-CCc
Q psy13309 1075 -----------FSLNGELLMDALGGETTFADVQGEGFVP----ACTLGVGQRAKLTFG-QDV 1120 (1568)
Q Consensus 1075 -----------F~lNG~~l~~~~g~g~AF~di~~~~~~P----a~SL~~~q~~~~NfG-~~~ 1120 (1568)
|++||..+ +++++.+..+.+.+ +.-+..+|.|.+||| +.+
T Consensus 150 ~~~~~~~q~i~~t~~g~~~------~~~~~~~~~~~~~~~~n~~~~~s~~~~I~~~~g~~~~ 205 (469)
T KOG1477|consen 150 CGINEITQEIFFTKNGTEV------GEIIKPLSPDLLEENGNLAWLFSPNEEVEVNFGLEEE 205 (469)
T ss_pred eccchhhheeeeccCcccc------ccccccccccccccccceeeEeccCceeeeeecCCCc
Confidence 88888887 68999988888888 888899999999999 544
No 22
>KOG3359|consensus
Probab=97.25 E-value=0.0017 Score=82.91 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=86.7
Q ss_pred CceecCCEEEEEEccCC-CcccccCC------CCceEEEe---eeceeeEEEEEeecccccccccccccccccCCCCCCC
Q psy13309 44 EKVRVGDDLILVSVATE-RYLHTTKE------NDLSVVNA---SFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVT 113 (1568)
Q Consensus 44 e~VrvgD~ViLvsv~s~-~yLH~S~~------~~~~EVna---S~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~G 113 (1568)
+.|.+|=+|.|.+.+++ -|||-... ++.-+|=+ ...+..|.|.+...+.+. ++..... +||.|
T Consensus 312 ~~v~~GS~Itir~~~~~~gyLHSH~~~YP~g~S~QQQVT~Y~~~D~NN~Wli~~~~~~~d~--~~~~~~~-----~v~~G 384 (723)
T KOG3359|consen 312 RDVAYGSTITLRHHKTGGGYLHSHLHTYPEGYSEQQQVTGYPHKDANNEWLIELNPHPSDP--VNATQIE-----PVRHG 384 (723)
T ss_pred ceeeeccEEEEEecCCcceeeecccccCCCCcCccceEEeecccCCCceEEEecCCCCccc--ccCCcce-----eccCC
Confidence 34667888999998876 89994322 23444433 234578999863222221 1111122 45669
Q ss_pred cEEEEccCCCCccCc--------cccceeEEEEecCccccCCcceEEEeecccc--cCCccce-ecCceEEEEcCCCcee
Q psy13309 114 NVSLYLHPGLICPDR--------SKYLFHIVVYEGGSVMSQARSLWRLELARTK--WAGGFIN-WYHPMRIRHLTTGRYL 182 (1568)
Q Consensus 114 DVVRLfH~E~~~~~~--------~~~~~~v~~~e~g~~~tsa~sLWeIE~~~~~--~~GG~v~-Wgq~fRLRHLtTG~YL 182 (1568)
|+|||.|....+.-. ++.+..|--|....-...++-+|+||.++.. -.+..++ =...|||+|+.||.||
T Consensus 385 ~~vrL~H~~T~r~LhsHdv~apvs~~~~EvS~yg~~~~~gd~~d~w~veIv~~~~~~~~~~i~tl~t~fRl~h~~t~c~L 464 (723)
T KOG3359|consen 385 DIVRLRHKMTGRNLHSHDVAAPVSPQQYEVSCYGDSGFEGDANDLWRVEIVKKKPNEDQERIKTLTTEFRLIHVLTGCYL 464 (723)
T ss_pred cEEEEEecccCcccccCCCCCCCCCCceEEEEEeccccccCccccEEEEEecCCCCCCCceEEEeeeEEEEEEcccceEE
Confidence 999999999764332 2223334334333335789999999999875 2334444 3689999999999999
Q ss_pred eeeec
Q psy13309 183 STNEN 187 (1568)
Q Consensus 183 av~~d 187 (1568)
.-...
T Consensus 465 ~ss~~ 469 (723)
T KOG3359|consen 465 KSSGK 469 (723)
T ss_pred ccCCC
Confidence 98753
No 23
>KOG2242|consensus
Probab=97.25 E-value=0.00084 Score=85.03 Aligned_cols=117 Identities=11% Similarity=-0.038 Sum_probs=85.8
Q ss_pred ceeeecc----eeEEEEEEeeCCceEEeeccCCCCC----CCCCCCCCCceeEeCCcccc---c--cCCCCCCCCCCceE
Q psy13309 1007 NYAVSSG----KWYFEFEILTAGPMRVGWARVDCAP----GAQLGSDENSWAFDGFNRHI---K--INLFQQDKKDYSIS 1073 (1568)
Q Consensus 1007 ty~v~~G----kwYfEv~v~t~G~mrvGWa~~~~~~----~~~vG~D~~Sy~fdG~~~h~---~--~~~yG~~w~~GDVv 1073 (1568)
+..+..+ +||++.+++++|.|+++|++..... ..++|+|..+.++++.+.-. . .-.=.+.|+++|++
T Consensus 374 ~~~~~d~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 453 (558)
T KOG2242|consen 374 EVEGKDVGETAVLEMNANFTLPGVMDYMDETGDSELLKEEAYGIGDQYSEEARKALPPQKKPNDRRKSNINETDTQQQRR 453 (558)
T ss_pred eeecccCCcceEEEEeeeeccCchhhhhhhccccccchhhcccccccHhHHhhhccCcccccccccccCcCcccchhhhc
Confidence 5555555 9999999999999999999998865 46799999999999987632 1 23346889999999
Q ss_pred EEEeCCc-----cccccC--C-Cccccccc---cCCccceeeeecCCcEEEEEeCCCcccccc
Q psy13309 1074 GFSLNGE-----LLMDAL--G-GETTFADV---QGEGFVPACTLGVGQRAKLTFGQDVNQLKY 1125 (1568)
Q Consensus 1074 GF~lNG~-----~l~~~~--g-~g~AF~di---~~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky 1125 (1568)
|.+.||- ..+... | .++.|..- .....+++.+-...|++.++|+..+ |+|
T Consensus 454 g~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 514 (558)
T KOG2242|consen 454 GGTANGSQKRGGFNMSGGQLGAPGNRGGNNRRDDNEPSRWGSSDMSFQQCPPPFQAGP--FQP 514 (558)
T ss_pred cccccCCccceeeecccCCCCCCccccccccCCCCCCCccCCCCcccccCccccCCCC--CCC
Confidence 9887762 111111 1 34444432 2456778888888888899999877 666
No 24
>KOG3953|consensus
Probab=96.98 E-value=0.0015 Score=72.82 Aligned_cols=115 Identities=20% Similarity=0.228 Sum_probs=78.7
Q ss_pred CceeEeecCCCccccccceecccccccccCC-CCccccccccccCCccccccCC--ccccCCcccc-ccCCCCCCCcccC
Q psy13309 572 NNICDYLLPGKNLLLQTQLVDHVASYVPYPG-GGEKWGGNGVGDDLYSFGFDGA--HLWTGGRRTE-VIPGTLEPYIKKG 647 (1568)
Q Consensus 572 ~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~-~g~~~gg~gvGdd~~S~gfDG~--~~w~~~~~~~-~~~~~~~~~~~~G 647 (1568)
.-.|+...|.|.+ -|..|- |.+|..- .-..-.-+-+|.+..|||.|=. .+||++...- +-.....|....+
T Consensus 70 ~h~w~i~w~~r~~--GT~avV---GIaTk~Aplha~gy~aLlGs~~qswGw~l~~~~l~H~g~~~~~yp~~~~~p~~~vp 144 (242)
T KOG3953|consen 70 RHAWEIAWPNRQR--GTHAVV---GIATKVAPLHAVGYTALLGSNSQSWGWDLGRNVLYHDGQVAGLYPALNRQPKYNVP 144 (242)
T ss_pred ceEEEEEecCCcc--CCcceE---EEEcccCchhhhHHHHHhCCCCCccceecccceeeecCccccccccccCCchhcCC
Confidence 4578888877632 222222 3333110 0011134458999999998865 7899872211 1011336667889
Q ss_pred CEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccCC
Q psy13309 648 DVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSK 692 (1568)
Q Consensus 648 DviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~ 692 (1568)
|.|.|.||.+.|+.+|..||.-+|+||+... |-..|||||-+.+
T Consensus 145 ~ri~viLDm~egtl~F~~~~e~LGvAFRgL~-~~~LYP~Vsav~g 188 (242)
T KOG3953|consen 145 DRILVILDMIEGTLSFAADGEYLGVAFRGLK-DKKLYPAVSAVWG 188 (242)
T ss_pred ceEEEEEeeccceEEEEECCeEEeeeecCCC-CCcceeeeeehhc
Confidence 9999999999999999999999999999877 6789999976555
No 25
>KOG4367|consensus
Probab=96.66 E-value=0.0041 Score=73.62 Aligned_cols=222 Identities=22% Similarity=0.308 Sum_probs=127.2
Q ss_pred CHHHHHHHHHhCCHHHHh-h---ccHHHHHHHHHHHHHcCCCchhhhhhc---cccccCCcccccchHHHHhhhcCC---
Q psy13309 454 GMLDVLHCVLIDSPEALN-M---MRDEHIKVIISLLEKHGRDPKVLDVLC---SLCVGNGVAVRSSQNNICDYLLPG--- 523 (1568)
Q Consensus 454 gildvL~~lL~nN~elLn-~---I~e~hI~~fIsLL~k~~r~~k~Ld~Ls---sLCvcnG~AI~~NQelIc~~LL~~--- 523 (1568)
.|+++=.|.-+||.--|. + +.---.+-||--|+. |.+..|=++.. .+|..+|--.++.=+.=.+.+-+.
T Consensus 441 pilq~~ec~t~nns~t~~wkqp~~~~~~~dg~~leld~-g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s 519 (699)
T KOG4367|consen 441 PILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDD-GNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVS 519 (699)
T ss_pred ceeehhhhhccCCceEEEeecCCCCCCCCcceEEEeec-CCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCC
Confidence 477777888888764432 1 111123444444554 55555666654 688888877777666655655532
Q ss_pred ---CCcceeeecccceehhhhhhhhhCCCCccce-eecceeec-----------ccccccccCCceeEeecCCCcccccc
Q psy13309 524 ---KNLLLQTQLDEHIKVIISLLEKHGRDPKVLD-VLCSLCVG-----------NGVAVRSSQNNICDYLLPGKNLLLQT 588 (1568)
Q Consensus 524 ---~~lll~T~~v~hi~s~i~~lek~gr~p~vl~-vlcslcv~-----------~G~a~~s~q~~~~~~~lp~~~lllqT 588 (1568)
+.|.+||. ||.|.- |++ .|.--| +|.+-|.. .|.-..|-=--||+..+
T Consensus 520 ~ys~tl~lqts---~vawfq--lt~---spsqrdmilsnecatlsgssleyrtilgsiafskgvhywevti--------- 582 (699)
T KOG4367|consen 520 PYSKTLVLQTS---EVAWFQ--LTP---SPSQRDMILSNECATLSGSSLEYRTILGSIAFSKGVHYWEVTI--------- 582 (699)
T ss_pred cccceeEeeec---ceeeee--ccC---CchhhceeeecccceecccccchheeeeecccccceeEEEEEE---------
Confidence 34888887 555541 111 111111 12222221 23334442224566555
Q ss_pred ceecccccccccCCCCc---cccccccccCCcccc--ccCCccccCCccccccCCCCCCCcccCCEEEEeeeCCCCeEEE
Q psy13309 589 QLVDHVASYVPYPGGGE---KWGGNGVGDDLYSFG--FDGAHLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIPIITF 663 (1568)
Q Consensus 589 ~~v~~~~~~~p~~~~g~---~~gg~gvGdd~~S~g--fDG~~~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~~g~isF 663 (1568)
|-..+-.....+-. -.-..-+|+|...|+ .||.+-|+-...++. .....-...|-|||+.||++.|++.|
T Consensus 583 ---drhdgnsdivigvaqpavnrnvmlgkdlhgwsmyvdgerswylhnethh--nrvlggvtrgtvigvrldcdrgtmey 657 (699)
T KOG4367|consen 583 ---DRHDGNSDIVIGVAQPAVNRNVMLGKDLHGWSMYVDGERSWYLHNETHH--NRVLGGVTRGTVIGVRLDCDRGTMEY 657 (699)
T ss_pred ---eccCCCCCceEEecchhhhhceeecccccceeEEEcCcceeEEeccccc--cccccccccccEEEEEEeccCCceEE
Confidence 32222111000000 011234788888886 689988864433321 11122367899999999999999999
Q ss_pred eeCCcccc-cccccccCCCcceeeeeccCCcceEEeec
Q psy13309 664 TFNGSLVS-GAFRDFNLDGMFFPVISCSSKLSCRFLFG 700 (1568)
Q Consensus 664 ~~NG~~vg-~~f~~~~~dg~~fpavS~~~~~~~~fnfG 700 (1568)
++|...-+ -||.+. .|+||||+|+.+..++.+--|
T Consensus 658 tvndrqddsmaftnm--rglyypafsvnanssitvhtg 693 (699)
T KOG4367|consen 658 TVNDRQDDSMAFTNM--RGLYYPAFSVNANSSITVHTG 693 (699)
T ss_pred EeccccCCceeeecc--cceeeeeeEeccCceEEEecC
Confidence 99987433 367765 699999999999888777665
No 26
>KOG3358|consensus
Probab=96.49 E-value=0.0044 Score=66.26 Aligned_cols=132 Identities=20% Similarity=0.217 Sum_probs=72.6
Q ss_pred cccccCCCCCCCcEEEEccCCCCccCcc--------ccceeEEEEecCccccCCcceEEEeeccc-cc-CCccceecCce
Q psy13309 102 EVMSCGSSTEVTNVSLYLHPGLICPDRS--------KYLFHIVVYEGGSVMSQARSLWRLELART-KW-AGGFINWYHPM 171 (1568)
Q Consensus 102 ~~yLkG~~lr~GDVVRLfH~E~~~~~~~--------~~~~~v~~~e~g~~~tsa~sLWeIE~~~~-~~-~GG~v~Wgq~f 171 (1568)
++++.+ |.|+.|.|.....-..+ ..||.|--.+ ....+||.|+|-..-. .| +|.+|+=|+++
T Consensus 23 e~~VTc-----gSvlKlln~~~~~RLHSHDVkYGSgSGQQSVTgv~---~~dD~NSyW~Ik~~~~~~c~rG~pikcG~~i 94 (211)
T KOG3358|consen 23 EDVVTC-----GSVLKLLNTKHKFRLHSHDVKYGSGSGQQSVTGVE---GVDDSNSYWRIKPVSGTTCERGDPIKCGQTI 94 (211)
T ss_pred CceEEh-----hhhHHhhccccceeeeccccCccCCCCcceeeccc---ccccCcceEEEecCCCCcccCCCccccCCeE
Confidence 345666 68888877764322111 1222221111 1457999999987644 33 78899999999
Q ss_pred EEEEcCCCceeeeeecCccccccccccCCCCcceEeeccccccccccccccccc-cCCcceeeCCcEEEEEEcccCeeeE
Q psy13309 172 RIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEV-IGAPIIKYGDSTVLVQHSENGLWLT 250 (1568)
Q Consensus 172 RLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~-m~~~~I~~gdSyvrIqH~~Tg~WL~ 250 (1568)
||.|+.||+.|----=. ...+ ...+-++|.=....|..+- -+. ...++-+. |.-|||||+.|+.+|+
T Consensus 95 RL~H~~TgknLHSHhf~----sPlS-gnqEVSafG~dgegDtgD~------Wtvic~g~~W~r-~~~vrl~Hi~T~~yLs 162 (211)
T KOG3358|consen 95 RLTHLKTGKNLHSHHFT----SPLS-GNQEVSAFGEDGEGDTGDH------WTVICNGKTWKR-DARVRLQHIDTSVYLS 162 (211)
T ss_pred EEEEeecccchhhcccC----CCCC-CCeeEEeecccCCCCcccc------eEEEeCCccccc-cceEEEEEeccceeEE
Confidence 99999999988653110 0000 0111122211111111110 000 01122323 7889999999999999
Q ss_pred eee
Q psy13309 251 YKS 253 (1568)
Q Consensus 251 ~~~ 253 (1568)
..-
T Consensus 163 ~sg 165 (211)
T KOG3358|consen 163 VSG 165 (211)
T ss_pred ecc
Confidence 764
No 27
>KOG3358|consensus
Probab=96.43 E-value=0.013 Score=62.84 Aligned_cols=41 Identities=22% Similarity=0.582 Sum_probs=35.9
Q ss_pred CCCceeEEEEEccccccc-CCCceecCCEEEEEEccCCCccc
Q psy13309 24 SQGEACWWTVHPASKQRS-EGEKVRVGDDLILVSVATERYLH 64 (1568)
Q Consensus 24 ~~~E~cwF~I~P~~K~Rs-eGe~VrvgD~ViLvsv~s~~yLH 64 (1568)
..+.+++|+|-|..---- .||+|+-|+.|.|..++|+..||
T Consensus 65 ~dD~NSyW~Ik~~~~~~c~rG~pikcG~~iRL~H~~TgknLH 106 (211)
T KOG3358|consen 65 VDDSNSYWRIKPVSGTTCERGDPIKCGQTIRLTHLKTGKNLH 106 (211)
T ss_pred cccCcceEEEecCCCCcccCCCccccCCeEEEEEeecccchh
Confidence 446789999999987444 49999999999999999999997
No 28
>KOG3953|consensus
Probab=96.30 E-value=0.0082 Score=67.23 Aligned_cols=97 Identities=26% Similarity=0.318 Sum_probs=76.0
Q ss_pred ceeeecceeEEEEEEee--CC-ceEEeeccCCCCC-----CCCCCCCCCceeEeCCcc---ccc--cCCC-----CCCCC
Q psy13309 1007 NYAVSSGKWYFEFEILT--AG-PMRVGWARVDCAP-----GAQLGSDENSWAFDGFNR---HIK--INLF-----QQDKK 1068 (1568)
Q Consensus 1007 ty~v~~GkwYfEv~v~t--~G-~mrvGWa~~~~~~-----~~~vG~D~~Sy~fdG~~~---h~~--~~~y-----G~~w~ 1068 (1568)
.-..+.|.-++|++... -| ..-||-||..|+. -..||.|++||++|=.+. |+| .-.| .+.+.
T Consensus 63 k~g~~~g~h~w~i~w~~r~~GT~avVGIaTk~Aplha~gy~aLlGs~~qswGw~l~~~~l~H~g~~~~~yp~~~~~p~~~ 142 (242)
T KOG3953|consen 63 KRGYSRGRHAWEIAWPNRQRGTHAVVGIATKVAPLHAVGYTALLGSNSQSWGWDLGRNVLYHDGQVAGLYPALNRQPKYN 142 (242)
T ss_pred eeeeccCceEEEEEecCCccCCcceEEEEcccCchhhhHHHHHhCCCCCccceecccceeeecCccccccccccCCchhc
Confidence 45567899999999876 34 5779999999986 356999999999985542 653 1112 35588
Q ss_pred CCceEE-----------EEeCCccccccCCCccccccccCCccceeeeecCC
Q psy13309 1069 DYSISG-----------FSLNGELLMDALGGETTFADVQGEGFVPACTLGVG 1109 (1568)
Q Consensus 1069 ~GDVvG-----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~~ 1109 (1568)
.+|-|+ |..+|+.| |+||..+++..+|||||=--|
T Consensus 143 vp~ri~viLDm~egtl~F~~~~e~L------GvAFRgL~~~~LYP~Vsav~g 188 (242)
T KOG3953|consen 143 VPDRILVILDMIEGTLSFAADGEYL------GVAFRGLKDKKLYPAVSAVWG 188 (242)
T ss_pred CCceEEEEEeeccceEEEEECCeEE------eeeecCCCCCcceeeeeehhc
Confidence 999888 99999998 899999999999999985433
No 29
>KOG4030|consensus
Probab=96.18 E-value=0.011 Score=62.04 Aligned_cols=69 Identities=26% Similarity=0.476 Sum_probs=53.9
Q ss_pred CCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccCCcceEEeecCCcCCcccCCCCCChhh
Q psy13309 641 EPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDHGRLKYIPPEEFSPL 717 (1568)
Q Consensus 641 ~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~~~~~fnfGg~~~~fk~~Pp~g~~p~ 717 (1568)
.-++..|||||.+.| .=+..|++||+.+-+-|... .|..||+|=.--.+-.-..|. .|.+.||+||-.+
T Consensus 122 ~~~p~EGDvVGvayD--HVELnfY~NGKn~e~p~~gv--RG~vyPvvYVddsAILD~~f~----nF~h~PPpGFe~I 190 (197)
T KOG4030|consen 122 TVFPEEGDVVGVAYD--HVELNFYVNGKNVEDPITGV--RGPVYPVVYVDDSAILDLKFK----NFTHAPPPGFEEI 190 (197)
T ss_pred ccCCccCcEEEEEee--eEEEEEEEcCceeccccccc--ccceeeEEEeCCceEEEEEec----ccccCCCCChhhe
Confidence 346789999999965 66889999999998888754 489999996655555555564 8889999998653
No 30
>PF02815 MIR: MIR domain; InterPro: IPR003608 The MIR domain is named after three of the proteins in which it occurs: protein Mannosyltransferase (2.4.1.109 from EC), Inositol 1,4,5-trisphosphate receptor (IP3R) and Ryanodine receptor (RyR). MIR domains have also been found in eukaryotic stromal cell-derived factor 2 (SDF-2) and in Chlamydia trachomatis protein CT153. The MIR domain may have a ligand transferase function. This domain has a closed beta-barrel structure with a hairpin triplet, and has an internal pseudo-threefold symmetry. The MIR motifs that make up the MIR domain consist of ~50 residues and are often found in multiple copies. Inositol 1,4,5-trisphosphate (InsP3) is an intracellular second messenger that transduces growth factor and neurotransmitter signals. InsP3 mediates the release of Ca2+ from intracellular stores by binding to specific Ca2+ channel-coupled receptors. Ryanodine receptors are involved in communication between transverse-tubules and the sarcoplamic reticulum of cardiac and skeletal muscle. The proteins function as a Ca2+-release channels following depolarisation of transverse-tubules []. The function is modulated by Ca2+, Mg2+, ATP and calmodulin. Deficiency in the ryanodine receptor may be the cause of malignant hyperthermia (MH) and of central core disease of muscle (CCD) []. protein O-mannosyltransferases transfer mannose from DOL-P-mannose to ser or thr residues on proteins.; GO: 0016020 membrane; PDB: 1T9F_A 3UJ4_B 3UJ0_B 3T8S_B 3MAL_B 2XOA_A 1N4K_A.
Probab=96.11 E-value=0.038 Score=61.24 Aligned_cols=42 Identities=29% Similarity=0.574 Sum_probs=33.0
Q ss_pred CCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccc
Q psy13309 24 SQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHT 65 (1568)
Q Consensus 24 ~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~ 65 (1568)
.++..+.|.|.|..+-...|+.|..||.|.|..+.||+|||+
T Consensus 43 ~~~~~slW~IE~~~~~~~~g~~v~~g~~iRL~H~~Tg~yL~~ 84 (190)
T PF02815_consen 43 ATSANSLWQIEPVSEDPWSGGPVKWGDVIRLRHLSTGKYLHS 84 (190)
T ss_dssp GGSGGGEEEEEE-TSSTTTTSB-BTTSEEEEEETTTS-EEEE
T ss_pred ccccccceEEecCCCCcccCCcccCCCEEEEEEccCCCEEEE
Confidence 345566799999666555899999999999999999999994
No 31
>PF08709 Ins145_P3_rec: Inositol 1,4,5-trisphosphate/ryanodine receptor; InterPro: IPR014821 This domain corresponds to the ligand binding region on inositol 1,4,5-trisphosphate receptor, and the N-terminal region of the ryanodine receptor. Both receptors are involved in Ca2+ release. They can couple to the activation of neurotransmitter-gated receptors and voltage-gated Ca2+ channels on the plasma membrane, thus allowing the endoplasmic reticulum to discriminate between different types of neuronal activity []. ; PDB: 3UJ4_B 3UJ0_B 3T8S_B 3JRR_B 1XZZ_A 3ILA_B 3HSM_A 2XOA_A 3IM6_A 3IM7_A ....
Probab=95.58 E-value=0.079 Score=60.11 Aligned_cols=133 Identities=10% Similarity=0.119 Sum_probs=75.6
Q ss_pred CCCCCcEEEEccCCCC--ccCc-cccceeEEEEecCc----cc-cCCcceEEEeeccc--------------cc------
Q psy13309 109 STEVTNVSLYLHPGLI--CPDR-SKYLFHIVVYEGGS----VM-SQARSLWRLELART--------------KW------ 160 (1568)
Q Consensus 109 ~lr~GDVVRLfH~E~~--~~~~-~~~~~~v~~~e~g~----~~-tsa~sLWeIE~~~~--------------~~------ 160 (1568)
+||-||+|.|...... +... +-..+++++..... .+ .-.+|||+|.+... +.
T Consensus 5 ~L~~Gd~V~L~~~~~~~~~l~a~Gf~~~~~~l~~~~~~~~~~p~~f~~clF~I~p~~~~~a~~~~~~~~~~~~~~~~~~~ 84 (214)
T PF08709_consen 5 PLRYGDIVSLSCEDQDNGFLSAEGFGNRKCFLEPFSGDKNNPPKDFRDCLFQICPALSYRAQQELLKEQQRKQQQEKLSD 84 (214)
T ss_dssp B-BTT-EEEEEEESSSCEEEEESCSSC-BEEEEECCTTSSS-STTGGGGEEEEEEEEEHHHHHHHHHCCH-------HHH
T ss_pred ccccCcEEEEEEeCCCCeEEEEecccCCcEEEEECCCcccCCccchheeEEEEcCCccHHHHHHHHHhhhhcccccchhh
Confidence 4666999999999842 1100 11133455554422 12 34689999988732 10
Q ss_pred ---------CCccceecCceEEEEcCCCceeeeeecC-c------cccccccccCCCCcceEeecccccccccccccccc
Q psy13309 161 ---------AGGFINWYHPMRIRHLTTGRYLSTNENN-E------LYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLE 224 (1568)
Q Consensus 161 ---------~GG~v~Wgq~fRLRHLtTG~YLav~~d~-~------l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~ 224 (1568)
.|-.+.+|+.+.|+|+.|++||++..+. . +.+...+....+.|.|.+.|.-.- +.+
T Consensus 85 ~~a~~~~~~~g~~v~YGq~IQL~H~~S~kyL~~~~~~~s~~e~~~~~v~L~~~~~~e~s~F~i~P~~k~------r~~-- 156 (214)
T PF08709_consen 85 QAAQIEKEQNGTPVLYGQAIQLLHVKSNKYLTCNSTEPSEYEKNNFKVSLQEFSSGENSWFRIHPAYKQ------RSE-- 156 (214)
T ss_dssp HHHHHHHHHHT-B-BTTEEEEEEETTTTEEEEEEEEEESSSSTTSEEEEEESSSSSGGGEEEEEESSTT------S-T--
T ss_pred hhhhhhcccCCCEEEecceEEEeEeCccEEEEEeCCCCCcccccceEEEeccCCCcccEEEEEEcchhe------EcC--
Confidence 1445999999999999999999998654 1 112222222326688998875211 111
Q ss_pred ccCCcceeeCCcEEEEEEcccCeeeEeee
Q psy13309 225 VIGAPIIKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 225 ~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
...|.+| .-|.|..+.++.+||...
T Consensus 157 ---Gd~V~~g-D~i~l~~~~~~~~Lh~s~ 181 (214)
T PF08709_consen 157 ---GDPVRYG-DQIILISVSTEQYLHVSS 181 (214)
T ss_dssp ---TSB-BTT--EEEEEETTT-SEEEEEE
T ss_pred ---CCeeeeC-CEEEEEECCCCCcccccC
Confidence 1236674 456678899999999653
No 32
>smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases.
Probab=95.57 E-value=0.0077 Score=53.55 Aligned_cols=27 Identities=56% Similarity=1.144 Sum_probs=24.4
Q ss_pred CccceecCceEEEEcCCCceeeeeecC
Q psy13309 162 GGFINWYHPMRIRHLTTGRYLSTNENN 188 (1568)
Q Consensus 162 GG~v~Wgq~fRLRHLtTG~YLav~~d~ 188 (1568)
|+.+.||+.+||||+.||+||......
T Consensus 1 g~~v~~g~~vrL~H~~tg~yL~s~~~~ 27 (57)
T smart00472 1 GGFVRWGDVVRLRHVTTGRYLHSHENK 27 (57)
T ss_pred CCccccCCEEEEEEhhhCcEeecCCCC
Confidence 678999999999999999999997654
No 33
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.22 E-value=0.064 Score=68.97 Aligned_cols=126 Identities=15% Similarity=0.169 Sum_probs=80.0
Q ss_pred CCEEEEEEccCC-CcccccCC-----CCceEEEe---eeceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEc
Q psy13309 49 GDDLILVSVATE-RYLHTTKE-----NDLSVVNA---SFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYL 119 (1568)
Q Consensus 49 gD~ViLvsv~s~-~yLH~S~~-----~~~~EVna---S~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLf 119 (1568)
++.|.|.+.+++ -|||-... ++.-+|-. ...+..|.|.++ . ++...-. +|+.|++|||+
T Consensus 305 ~S~itirh~~t~g~~LHSh~~~YP~gs~qqqvt~y~~~d~NN~W~~e~~------~-~~~~~~~-----~l~~G~~vrL~ 372 (699)
T COG1928 305 SSTITIRHAGTGGGYLHSHNQLYPEGSEQQQVTGYGHKDANNEWLIELS------D-ENATQIE-----PLKDGQSVRLR 372 (699)
T ss_pred eeEEEEeccCCccchhhcccCCCCCCcccceeecccccccccceeeeec------c-cccccce-----eccCCcEEEEE
Confidence 399999998886 89985432 34455533 334678999844 1 1111122 44559999999
Q ss_pred cCCCCccCc--------cccceeEEEEecCccccCCcceEEEeecccc--cCCcc-ceecCceEEEEcCCCceeeeeec
Q psy13309 120 HPGLICPDR--------SKYLFHIVVYEGGSVMSQARSLWRLELARTK--WAGGF-INWYHPMRIRHLTTGRYLSTNEN 187 (1568)
Q Consensus 120 H~E~~~~~~--------~~~~~~v~~~e~g~~~tsa~sLWeIE~~~~~--~~GG~-v~Wgq~fRLRHLtTG~YLav~~d 187 (1568)
|....+... ++.+..+--| +.......+-.|.||.+... -.... --|...|||+|..||.||+-.+.
T Consensus 373 H~~T~~~Lh~H~~~~pvS~~~~EvS~y-g~~~~gd~~d~w~i~i~~~~~~~~~~~i~pl~t~fRl~h~~~~cyL~s~~~ 450 (699)
T COG1928 373 HKYTGKNLHFHDVKPPVSGNQYEVSGY-GDSFEGDEKDDWIIEIVKDEANEDQERIHPLETKFRLYHVLTGCYLASHDL 450 (699)
T ss_pred EeeccceeecCCCCCCCCCCceeeeec-cccccCCcccceeeEeeeccCCCccceeeecccceeeeecccceeeccCCC
Confidence 998654322 1211112212 22245678999999999873 01122 35899999999999999998754
No 34
>smart00472 MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases.
Probab=94.56 E-value=0.054 Score=48.14 Aligned_cols=45 Identities=36% Similarity=0.496 Sum_probs=36.5
Q ss_pred CCceecCCEEEEEEccCCCcccccCCC------CceEEEee-----eceeeEEEEE
Q psy13309 43 GEKVRVGDDLILVSVATERYLHTTKEN------DLSVVNAS-----FHVTHWSVQP 87 (1568)
Q Consensus 43 Ge~VrvgD~ViLvsv~s~~yLH~S~~~------~~~EVnaS-----~~~T~WkI~l 87 (1568)
|+.|..||.|.|.++.|+.|||.+... +..||.+. ...+.|.|.+
T Consensus 1 g~~v~~g~~vrL~H~~tg~yL~s~~~~~~~~~~~q~eVt~~~~~~~~~~~~W~ie~ 56 (57)
T smart00472 1 GGFVRWGDVVRLRHVTTGRYLHSHENKLPPWGDGQQEVTGYGNPAGDANTLWLIEP 56 (57)
T ss_pred CCccccCCEEEEEEhhhCcEeecCCCCCCCCCCCcceEEEECCCCCCCCCcEEEEe
Confidence 678999999999999999999976443 57888873 4577899864
No 35
>KOG1477|consensus
Probab=93.37 E-value=0.042 Score=68.83 Aligned_cols=106 Identities=10% Similarity=0.069 Sum_probs=81.4
Q ss_pred eeEeCCcccc----c-cCCCCCCCCCCceEE-----------EEeCCccccccCCCccccccccCCccceeeeecCCcEE
Q psy13309 1049 WAFDGFNRHI----K-INLFQQDKKDYSISG-----------FSLNGELLMDALGGETTFADVQGEGFVPACTLGVGQRA 1112 (1568)
Q Consensus 1049 y~fdG~~~h~----~-~~~yG~~w~~GDVvG-----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~~q~~ 1112 (1568)
|+|+|.++|. + ++.||+.+.+||||| |++||..+ |+||.+.....+.++.+...+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~i~~~~~~~~~~~~~~~~~~~~------gi~f~~~~~~~~~dvg~~~~~~~~ 74 (469)
T KOG1477|consen 1 YGYHGDDGNFFLKSGDGQLYGPVFTTGDVIPCEVNTINGSDFFTKNGPDM------GIAFYTPPALLYHDVGVVQAGEPL 74 (469)
T ss_pred CCCcccchhhhhhcccccccCCcCCccccccceEeccCCceeEEEEcCCc------ceeeecCccccCCCcceeeCCCCC
Confidence 4678888864 3 789999999999999 88899887 799998877788888889999999
Q ss_pred EEEeCCCccccccccccCCCCCcccccccccccchhhhcccccceeecCCC-CC--ceEEEEeCCCCC
Q psy13309 1113 KLTFGQDVNQLKYFSMCGLQEGYEPFCVNMKRAVTYWYTRDQPIFENTDDY-PS--VIDVTRIPAGSD 1177 (1568)
Q Consensus 1113 ~~NfG~~~~~~ky~~~~~~qeg~~p~~~~~~~~~~~w~~~~~~~f~~~~~~-~~--~~~v~r~~~~~~ 1177 (1568)
..|||. .||.+.+...+..|..+..-.-+..+.. ++ ..+|.+-.|+..
T Consensus 75 ~~N~~~-----------------~~Fe~~i~d~g~~~~i~i~~~~~~~~~~~~~g~~~~s~~y~g~~g 125 (469)
T KOG1477|consen 75 PANFGI-----------------YYFEFDILDYGIEGRIKIGFLIDSFSIIESEGYTMNSLGYHGNSG 125 (469)
T ss_pred Cccccc-----------------ceeeeeHHHhhhhhceEEEEEecccccccccchhhhhhcccCCch
Confidence 999998 4778888899999998866655544322 22 223555555444
No 36
>KOG2242|consensus
Probab=92.38 E-value=0.15 Score=65.17 Aligned_cols=154 Identities=14% Similarity=-0.015 Sum_probs=101.2
Q ss_pred hhhhCCCCccceeecceeec-------ccccccccCCceeEeecCCCccccccceecccccccccCCCCccccccccccC
Q psy13309 543 LEKHGRDPKVLDVLCSLCVG-------NGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGGGEKWGGNGVGDD 615 (1568)
Q Consensus 543 lek~gr~p~vl~vlcslcv~-------~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~g~~~gg~gvGdd 615 (1568)
.......|.++++.|++--. .+..+...++|.....+ ...+.++. .++.--+.+.+..+.++||+
T Consensus 349 ~~~~~~~p~~~~~~~d~~s~~~v~~~~~~~d~~~~~~~e~~~~~------~~~~~~~~--~~~~~~~~~~~~e~~~~~~~ 420 (558)
T KOG2242|consen 349 SQFSRKAPVVCPAFEDLKSRTIVRTEVEGKDVGETAVLEMNANF------TLPGVMDY--MDETGDSELLKEEAYGIGDQ 420 (558)
T ss_pred ccccccCCCcCCchhhhccccceEeeeecccCCcceEEEEeeee------ccCchhhh--hhhccccccchhhccccccc
Confidence 44555677777666653222 23334444444333333 22222333 34445556678889999999
Q ss_pred CccccccCCc--cccCCccccccCCCCCCCcccCCEEEEeeeCCCCeEEEeeCCccccccccc--cc---CCCcceeeee
Q psy13309 616 LYSFGFDGAH--LWTGGRRTEVIPGTLEPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRD--FN---LDGMFFPVIS 688 (1568)
Q Consensus 616 ~~S~gfDG~~--~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~--~~---~dg~~fpavS 688 (1568)
..+.++++.. +|...+.. ....+-++.+|++|-.++...+...|..||..+|.--.. ++ -+-..+++.+
T Consensus 421 ~~~~~~~~~~~~~~~~~r~~----~~~~~~~~~~~~~g~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (558)
T KOG2242|consen 421 YSEEARKALPPQKKPNDRRK----SNINETDTQQQRRGGTANGSQKRGGFNMSGGQLGAPGNRGGNNRRDDNEPSRWGSS 496 (558)
T ss_pred HhHHhhhccCcccccccccc----cCcCcccchhhhccccccCCccceeeecccCCCCCCccccccccCCCCCCCccCCC
Confidence 9999999994 45444322 245677999999999999999999999999865532111 11 1246778888
Q ss_pred ccCCcceEEeecCCcCCcccCC
Q psy13309 689 CSSKLSCRFLFGGDHGRLKYIP 710 (1568)
Q Consensus 689 ~~~~~~~~fnfGg~~~~fk~~P 710 (1568)
.+..+.|+++|++. +|.|+|
T Consensus 497 ~~~~~~~~~~~~~~--~~~~~~ 516 (558)
T KOG2242|consen 497 DMSFQQCPPPFQAG--PFQPPP 516 (558)
T ss_pred CcccccCccccCCC--CCCCCC
Confidence 88889999999988 888753
No 37
>KOG3359|consensus
Probab=88.68 E-value=2.7 Score=54.93 Aligned_cols=129 Identities=18% Similarity=0.089 Sum_probs=83.2
Q ss_pred ceEEEeeCCCCceeEEEEEcccccccC------CCceecCCEEEEEEccCCCcccccCC-----CCceEEEe-------e
Q psy13309 16 FDVGLQEHSQGEACWWTVHPASKQRSE------GEKVRVGDDLILVSVATERYLHTTKE-----NDLSVVNA-------S 77 (1568)
Q Consensus 16 f~V~L~e~~~~E~cwF~I~P~~K~Rse------Ge~VrvgD~ViLvsv~s~~yLH~S~~-----~~~~EVna-------S 77 (1568)
-.|++=+ ..+++-||-|.| ....++ =++|+-||.|.|+.+.|++.||.... ++.+||-+ .
T Consensus 347 QQVT~Y~-~~D~NN~Wli~~-~~~~~d~~~~~~~~~v~~G~~vrL~H~~T~r~LhsHdv~apvs~~~~EvS~yg~~~~~g 424 (723)
T KOG3359|consen 347 QQVTGYP-HKDANNEWLIEL-NPHPSDPVNATQIEPVRHGDIVRLRHKMTGRNLHSHDVAAPVSPQQYEVSCYGDSGFEG 424 (723)
T ss_pred ceEEeec-ccCCCceEEEec-CCCCcccccCCcceeccCCcEEEEEecccCcccccCCCCCCCCCCceEEEEEecccccc
Confidence 3566654 678888999995 333333 45677899999999999999997643 35788865 2
Q ss_pred eceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCccCccc---------cceeEEEEecCccccCCc
Q psy13309 78 FHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICPDRSK---------YLFHIVVYEGGSVMSQAR 148 (1568)
Q Consensus 78 ~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~~~~~---------~~~~v~~~e~g~~~tsa~ 148 (1568)
..++.|+|.+.-.. .+..+.+++-- -..+||.|..++|+--+. .|+.|+=-+. ...-+
T Consensus 425 d~~d~w~veIv~~~------~~~~~~~i~tl----~t~fRl~h~~t~c~L~ss~~~LP~WGf~Q~EV~c~~~---~~~~~ 491 (723)
T KOG3359|consen 425 DANDLWRVEIVKKK------PNEDQERIKTL----TTEFRLIHVLTGCYLKSSGKKLPEWGFEQQEVVCAKN---PRDKS 491 (723)
T ss_pred CccccEEEEEecCC------CCCCCceEEEe----eeEEEEEEcccceEEccCCCcCCcccccceEEecccC---CcCCC
Confidence 24589999987221 11112333332 358999999988764322 1333321111 45678
Q ss_pred ceEEEeecccc
Q psy13309 149 SLWRLELARTK 159 (1568)
Q Consensus 149 sLWeIE~~~~~ 159 (1568)
+.|-||-.+.+
T Consensus 492 T~WnVEe~~n~ 502 (723)
T KOG3359|consen 492 TTWNVEEHENP 502 (723)
T ss_pred ceEEEecccCC
Confidence 89999986653
No 38
>COG1928 PMT1 Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
Probab=88.48 E-value=1.8 Score=56.28 Aligned_cols=131 Identities=18% Similarity=0.140 Sum_probs=73.0
Q ss_pred CcEEEEccCCCC---------ccCccccceeEEEEecCccccCCcceEEEeecccccCCc--cceecCceEEEEcCCCce
Q psy13309 113 TNVSLYLHPGLI---------CPDRSKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGG--FINWYHPMRIRHLTTGRY 181 (1568)
Q Consensus 113 GDVVRLfH~E~~---------~~~~~~~~~~v~~~e~g~~~tsa~sLWeIE~~~~~~~GG--~v~Wgq~fRLRHLtTG~Y 181 (1568)
|++|.+-|.... .+-.+.+||+|-.|.- -.+|-.|.||..+. ..+. .++=|+.+||+|..||++
T Consensus 305 ~S~itirh~~t~g~~LHSh~~~YP~gs~qqqvt~y~~----~d~NN~W~~e~~~~-~~~~~~~l~~G~~vrL~H~~T~~~ 379 (699)
T COG1928 305 SSTITIRHAGTGGGYLHSHNQLYPEGSEQQQVTGYGH----KDANNEWLIELSDE-NATQIEPLKDGQSVRLRHKYTGKN 379 (699)
T ss_pred eeEEEEeccCCccchhhcccCCCCCCcccceeecccc----cccccceeeeeccc-ccccceeccCCcEEEEEEeeccce
Confidence 489999886532 1111334666666654 35889999996552 2332 577889999999999999
Q ss_pred eeeeecCccccccccccCCCCcceEeeccccccc-c-ccccccccccCCcceeeCCcEEEEEEcccCeeeEee
Q psy13309 182 LSTNENNELYLVTRDEATTASSTFCLRQEKDDQK-I-VLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTYK 252 (1568)
Q Consensus 182 Lav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~-~-v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~~ 252 (1568)
|-.-+-... + ++.+.+-|........|..+ . +..-++...-+...|+.-+|-+||.|+.+|..|-..
T Consensus 380 Lh~H~~~~p--v--S~~~~EvS~yg~~~~gd~~d~w~i~i~~~~~~~~~~~i~pl~t~fRl~h~~~~cyL~s~ 448 (699)
T COG1928 380 LHFHDVKPP--V--SGNQYEVSGYGDSFEGDEKDDWIIEIVKDEANEDQERIHPLETKFRLYHVLTGCYLASH 448 (699)
T ss_pred eecCCCCCC--C--CCCceeeeeccccccCCcccceeeEeeeccCCCccceeeecccceeeeecccceeeccC
Confidence 988654311 0 00011111111111111000 0 000000011133446666899999999999888655
No 39
>PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins. Some family members contain two copies of the region.
Probab=74.05 E-value=23 Score=38.02 Aligned_cols=63 Identities=14% Similarity=0.115 Sum_probs=42.2
Q ss_pred CcEEEEccCCCCccCc-cccceeEEEEecCccccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecC
Q psy13309 113 TNVSLYLHPGLICPDR-SKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENN 188 (1568)
Q Consensus 113 GDVVRLfH~E~~~~~~-~~~~~~v~~~e~g~~~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~ 188 (1568)
|-.|||--.+.. +.+ .+|...|.+...+ .+-++.|.||.+.. + .+.+|||- +=|+||++....
T Consensus 7 ~~~VRLRS~~~k-YL~ADeDg~~Vs~~~~~---~s~na~W~Ve~v~~----~----~~~v~L~s-aYGrYL~as~~~ 70 (142)
T PF04601_consen 7 GKHVRLRSHHGK-YLHADEDGEGVSQDRRG---ASLNAAWTVERVPG----S----PNYVRLRS-AYGRYLAASDEP 70 (142)
T ss_pred CCEEEEEecCCC-EEEEcCCCCeEEECCCC---CCCcceEEEEEecC----C----CCEEEEee-ccCceEeccCCc
Confidence 578888773322 211 2344556665554 36789999999753 1 35699985 899999998654
No 40
>cd00058 FGF Acidic and basic fibroblast growth factor family; FGFs are mitogens, which stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family plays essential roles in patterning and differentiation during vertebrate embryogenesis, and has neurotrophic activities. FGFs have a high affinity for heparan sulfate proteoglycans and require heparan sulfate to activate one of four cell surface FGF receptors. Upon binding to FGF, the receptors dimerize and their intracellular tyrosine kinase domains become active. FGFs have internal pseudo-threefold symmetry (beta-trefoil topology).
Probab=73.53 E-value=8.4 Score=40.26 Aligned_cols=59 Identities=20% Similarity=0.278 Sum_probs=39.6
Q ss_pred EEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceE
Q psy13309 135 IVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFC 206 (1568)
Q Consensus 135 v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~ 206 (1568)
+.+..+|.+ ..+..+.|+|+.+.. ..++||++.|++||+++....++... ...+++.|.
T Consensus 11 L~I~~dG~V~Gt~~~~~~~s~l~~~s~~~----------g~v~i~~v~s~~YLCmn~~G~ly~s~---~~~~dC~F~ 74 (123)
T cd00058 11 LQILPDGTVDGTRDDSSSYTILERIAVAV----------GVVSIKGVASCRYLCMNKCGKLYGSK---GFTEECLFR 74 (123)
T ss_pred EEEcCCCcEecccCCCCCCceEEEEECCC----------CEEEEEEcccceEEEECCCCCEEECC---CCCCCCEEE
Confidence 444445544 245789999999752 36899999999999999765443322 344555653
No 41
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=71.62 E-value=6.6 Score=38.74 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=72.4
Q ss_pred hhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccc
Q psy13309 369 FQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQA 448 (1568)
Q Consensus 369 lREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q 448 (1568)
+-++|++..++++|+..+ | .+.......|..++.++..+...+.....++.|.+.+....
T Consensus 3 ~~~~~~i~~l~~~l~~~~-------------------~-~~~~~a~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~l~~~~ 62 (120)
T cd00020 3 VIQAGGLPALVSLLSSSD-------------------E-NVQREAAWALSNLSAGNNDNIQAVVEAGGLPALVQLLKSED 62 (120)
T ss_pred HHHcCChHHHHHHHHcCC-------------------H-HHHHHHHHHHHHHhcCCHHHHHHHHHCCChHHHHHHHhCCC
Confidence 457889999999994321 1 24456667788888877677766666567888888777533
Q ss_pred cccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHcCCCc----hhhhhhcccc
Q psy13309 449 SSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKHGRDP----KVLDVLCSLC 502 (1568)
Q Consensus 449 ~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~~r~~----k~Ld~LssLC 502 (1568)
...-....-+|..+..+.++....+ +.+-|..++.+|... +. ..+.+|+.||
T Consensus 63 ~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~l~~l~~~l~~~--~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 63 EEVVKAALWALRNLAAGPEDNKLIVLEAGGVPKLVNLLDSS--NEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHCCChHHHHHHHhcC--CHHHHHHHHHHHHHhh
Confidence 3333234578888888887666533 334578888888752 22 3455566555
No 42
>smart00442 FGF Acidic and basic fibroblast growth factor family. Mitogens that stimulate growth or differentiation of cells of mesodermal or neuroectodermal origin. The family play essential roles in patterning and differentiation during vertebrate embryogenesis, and have neurotrophic activities.
Probab=67.34 E-value=13 Score=39.08 Aligned_cols=37 Identities=22% Similarity=0.364 Sum_probs=30.2
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELY 191 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~ 191 (1568)
.++.++|++..+.. ..++||++.|++||+++....++
T Consensus 30 ~~~~~ile~~s~~~----------g~V~ik~~~s~~YLCmn~~G~ly 66 (126)
T smart00442 30 SSSFTILEIIAVAV----------GVVAIKGVASCRYLCMNKCGKLY 66 (126)
T ss_pred CCcceEEEEEeccC----------CEEEEEEcccceEEEECCCCCEE
Confidence 57789999998753 25899999999999999876543
No 43
>PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures. Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A ....
Probab=61.18 E-value=20 Score=37.02 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=29.9
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
.+..+.|+|+.+.. ..++||++.|++||+++....+
T Consensus 28 ~~~~s~~~i~~~~~----------g~V~i~~~~s~~YLcmn~~G~l 63 (122)
T PF00167_consen 28 NSPYSVFEIHSVGF----------GVVRIRGVKSCRYLCMNKCGRL 63 (122)
T ss_dssp TSTTGEEEEEEEET----------TEEEEEETTTTEEEEEBTTSBE
T ss_pred CcceeEEEEEeccc----------eEEEEEEecceEEEEECCCCeE
Confidence 57889999999853 2689999999999999976543
No 44
>PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A ....
Probab=55.18 E-value=51 Score=32.80 Aligned_cols=75 Identities=15% Similarity=0.304 Sum_probs=46.6
Q ss_pred cceEEEeecccccCCccceecCceEEEEcCCCceeeeeecC---ccccccccccCCCCcceEeecccccccccccccccc
Q psy13309 148 RSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENN---ELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLE 224 (1568)
Q Consensus 148 ~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~---~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~ 224 (1568)
+-.|+|..+.. .+| .|+|++..||+||.+.... +..+...+....++..|.+.+
T Consensus 2 nQ~W~~~~~~~--~~g------~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~--------------- 58 (105)
T PF14200_consen 2 NQQWTFTPVGD--SDG------YYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEP--------------- 58 (105)
T ss_dssp GGEEEEEEEET--TTT------EEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEE---------------
T ss_pred CCEEEEEEecC--CCC------EEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEE---------------
Confidence 34699988753 233 3999999999999997643 111111111123333444432
Q ss_pred ccCCcceeeCCcEEEEEEcccCeeeEeee
Q psy13309 225 VIGAPIIKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 225 ~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
.+|.+++|+...+++-|.+..
T Consensus 59 --------~~~g~y~I~n~~s~~~Ldv~~ 79 (105)
T PF14200_consen 59 --------VGDGYYRIRNKNSGKVLDVAG 79 (105)
T ss_dssp --------STTSEEEEEETSTTEEEEEGG
T ss_pred --------ecCCeEEEEECCCCcEEEECC
Confidence 225678999999999998764
No 45
>KOG0946|consensus
Probab=41.72 E-value=2.4e+02 Score=37.96 Aligned_cols=100 Identities=18% Similarity=0.185 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHH
Q psy13309 329 LNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDI 408 (1568)
Q Consensus 329 l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~ 408 (1568)
+..++..|.|-++=+.+...- .=+.--+.+..-|||.-=+++.+-||.||.. .|.. .| --
T Consensus 168 IS~lmdlL~DsrE~IRNe~iL----lL~eL~k~n~~IQKlVAFENaFerLfsIIee------EGg~---dG-------gI 227 (970)
T KOG0946|consen 168 ISKLMDLLRDSREPIRNEAIL----LLSELVKDNSSIQKLVAFENAFERLFSIIEE------EGGL---DG-------GI 227 (970)
T ss_pred HHHHHHHHhhhhhhhchhHHH----HHHHHHccCchHHHHHHHHHHHHHHHHHHHh------cCCC---CC-------cc
Confidence 556677777766555542111 1111227778889999999999999999942 1110 00 11
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccc
Q psy13309 409 ISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQA 448 (1568)
Q Consensus 409 I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q 448 (1568)
++..|..||..++|.|.+|+.+|..-.||+-|.+.+...+
T Consensus 228 VveDCL~ll~NLLK~N~SNQ~~FrE~~~i~rL~klL~~f~ 267 (970)
T KOG0946|consen 228 VVEDCLILLNNLLKNNISNQNFFREGSYIPRLLKLLSVFE 267 (970)
T ss_pred hHHHHHHHHHHHHhhCcchhhHHhccccHHHHHhhcCccc
Confidence 6788889999999999999999988778988886665443
No 46
>cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF)
Probab=34.57 E-value=1.7e+02 Score=29.70 Aligned_cols=47 Identities=23% Similarity=0.424 Sum_probs=30.3
Q ss_pred cceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEee
Q psy13309 148 RSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLR 208 (1568)
Q Consensus 148 ~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~ 208 (1568)
...|++|... +..+.||. .+|+||++.++..+.. ..+ ......|.+.
T Consensus 33 ~e~F~l~~~~----------~g~v~Lrs-~~G~yls~~~~g~l~~-~~~--~~~~e~F~~e 79 (119)
T cd00257 33 DETFTLEFDN----------TGKYALRS-HDGKYLSADSDGGVQL-EGH--PNADCRFTLE 79 (119)
T ss_pred ceEEEEEECC----------CCeEEEEE-CCCcEEEEECCCCEEe-cCC--CCCCcEEEEE
Confidence 5678888632 34578897 7999999987653322 222 3455667665
No 47
>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism. The ability of this widely distributed heterotrimeric enzyme to act on a diverse array of substrates is largely controlled by the nature of its regulatory B subunit. There are multiple families of B subunits, this family is called the B56 family [].; GO: 0008601 protein phosphatase type 2A regulator activity, 0007165 signal transduction, 0000159 protein phosphatase type 2A complex; PDB: 2NYM_B 2NYL_B 2IAE_E 2NPP_B 3FGA_B 2JAK_A.
Probab=33.61 E-value=1.4e+02 Score=37.55 Aligned_cols=108 Identities=18% Similarity=0.294 Sum_probs=64.4
Q ss_pred chHHHHHHHHHHHHHHHHhhccchh-hhhhhhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHHhhccHHHHHHHH
Q psy13309 404 QSWDIISGYLYQLLAAIIKGNHTNC-AQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMRDEHIKVII 482 (1568)
Q Consensus 404 ~~~~~I~~~iY~LL~~lirgN~~N~-~~fa~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elLn~I~e~hI~~fI 482 (1568)
.+|.. .+.+|++|.+++.....+- ..|.++.++--|+..+++....+.--+.++|+.++...+.....|...-.+.|+
T Consensus 102 ~~WpH-L~~vY~il~~~i~~~~~~~~~~~i~~~fi~~Ll~l~~S~D~rER~~lk~~l~~iy~k~~~~r~~Ir~~i~~~~~ 180 (409)
T PF01603_consen 102 PSWPH-LQLVYEILLRFIESPPFDPAKKYIDQKFIKKLLELFDSPDPRERDYLKTILHRIYGKFPNLRSFIRKSINNIFY 180 (409)
T ss_dssp TTHHH-HHHHHHHHHHHHTSTT--CCTTTS-HHHHHHHHHTTTSSTHHHHHHHHHHHHHHHHH-TTTHHHHHHHHHHHHH
T ss_pred cccHh-HHHHHHHHHHHHHCccccHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 45875 6799999999999753322 113333355556666654433333234488888888777777777776677777
Q ss_pred HHHHHcC---CCchhhhhhccccccCCcccccchH
Q psy13309 483 SLLEKHG---RDPKVLDVLCSLCVGNGVAVRSSQN 514 (1568)
Q Consensus 483 sLL~k~~---r~~k~Ld~LssLCvcnG~AI~~NQe 514 (1568)
+.+.+.. .=...|++|+++- ||-+++..++
T Consensus 181 ~fi~e~~~~~gI~elLeil~sii--~gf~~plk~e 213 (409)
T PF01603_consen 181 RFIYETERHNGIAELLEILGSII--NGFAVPLKEE 213 (409)
T ss_dssp HHHHTTS--STHHHHHHHHHHHH--TT--SS--HH
T ss_pred HHhcCcccccCHHHHHHHHHHHH--hccCCCCcHH
Confidence 7777532 2236899999854 5666665554
No 48
>KOG1788|consensus
Probab=30.99 E-value=60 Score=43.97 Aligned_cols=69 Identities=16% Similarity=0.410 Sum_probs=42.5
Q ss_pred HHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHHhhccHHHHHHHHHHHHH
Q psy13309 414 YQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMRDEHIKVIISLLEK 487 (1568)
Q Consensus 414 Y~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elLn~I~e~hI~~fIsLL~k 487 (1568)
..+|-.++|+|..|+..|....-...|+..+-+.+...+ +|..+.|++...|+ ++..++|-.++++|+.
T Consensus 663 wDcLisllKnnteNqklFreanGvklilpflindehRSs--lLrivscLitvdpk---qvhhqelmalVdtLks 731 (2799)
T KOG1788|consen 663 WDCLISLLKNNTENQKLFREANGVKLILPFLINDEHRSS--LLRIVSCLITVDPK---QVHHQELMALVDTLKS 731 (2799)
T ss_pred HHHHHHHHhccchhhHHHHhhcCceEEEEeeechHHHHH--HHHHHHHHhccCcc---cccHHHHHHHHHHHHh
Confidence 678899999999999888542112222222223333334 99999999998886 3344444444444443
No 49
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=25.43 E-value=1.9e+02 Score=28.06 Aligned_cols=56 Identities=18% Similarity=0.317 Sum_probs=39.7
Q ss_pred CCCCCcEEEEccCCCCccCcccc--ceeEEEEecCccccCCcceEEEeecccccCCccceec
Q psy13309 109 STEVTNVSLYLHPGLICPDRSKY--LFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWY 168 (1568)
Q Consensus 109 ~lr~GDVVRLfH~E~~~~~~~~~--~~~v~~~e~g~~~tsa~sLWeIE~~~~~~~GG~v~Wg 168 (1568)
.+|+||.|-.-+.+......+++ .-.|+..++|+..-.+.+|+||=-+++ |.++|=
T Consensus 5 ~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~Vi~~~ggaR~P~~~tlFQVadVDt----G~I~wV 62 (75)
T PF11302_consen 5 SVKPGDTVIVQDEQEVGQKQDKDWWMGQVIHCEGGARDPKVPTLFQVADVDT----GVIRWV 62 (75)
T ss_pred ccCCCCEEEEecCccccccCCCCcEEEEEEEEeccccCCCCCceEEEEEccC----CeEEEE
Confidence 35789999998887322111111 234888999988889999999988765 777773
No 50
>PF13764 E3_UbLigase_R4: E3 ubiquitin-protein ligase UBR4
Probab=23.82 E-value=3.1e+02 Score=37.51 Aligned_cols=135 Identities=21% Similarity=0.378 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHHH--HHHHHHHhhhhhcccccccccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchh
Q psy13309 287 QEEESRTARVIRKCSSL--FTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRN 364 (1568)
Q Consensus 287 ~~eEvrd~~~i~s~~~~--l~~Fi~~L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~ 364 (1568)
++++.+-+.++..|-.+ +-..+..+......+ .+...|-.|..||. +.-.|
T Consensus 103 ~e~~~~~~~v~~~~gGL~~ll~~l~~~~~~~~~~------------~ll~~llkLL~~c~---------------Kv~~N 155 (802)
T PF13764_consen 103 PEQEFKIASVLAECGGLEVLLSRLDSIRDFSRGR------------ELLQVLLKLLRYCC---------------KVKVN 155 (802)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHhhccccCcH------------HHHHHHHHHHHHHH---------------hhHHH
Q ss_pred hhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhh------------
Q psy13309 365 RQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFA------------ 432 (1568)
Q Consensus 365 RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa------------ 432 (1568)
||.|++ .|.|+.+++.|.+.... +....--.+...++.++..++. ..|.....
T Consensus 156 R~~Ll~-~~al~~LL~~L~~~l~~------------~~~~~~~~i~E~LL~IiE~ll~--ea~~~~~~~~~~~~~~~~~~ 220 (802)
T PF13764_consen 156 RRALLE-LNALNRLLSVLNRALQA------------NQNSSQAEIAEQLLEIIESLLS--EANSSSSSESKSSSSLSGSE 220 (802)
T ss_pred HHHHHH-cCCHHHHHHHHHHHHhC------------ccccccchHHHHHHHHHHHHHH--HHhhhhhhhccccccccccc
Q ss_pred --hhhhHHHHHHHhcccccccCCCHHHHHHHHH
Q psy13309 433 --NTNRLNWLFSRLGSQASSEGTGMLDVLHCVL 463 (1568)
Q Consensus 433 --~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL 463 (1568)
..+++++|.+++...-....-.+++.|+.||
T Consensus 221 ~~~~~~v~~lL~~l~s~~~r~~~~i~~~l~RiL 253 (802)
T PF13764_consen 221 EQDKEQVEMLLERLNSPFVRSNPQILQALARIL 253 (802)
T ss_pred cccHHHHHHHHHHhcCccccCCHHHHHHHHHHh
No 51
>PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins. The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A.
Probab=22.12 E-value=1.2e+02 Score=30.92 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=34.8
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeec
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQ 209 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~ 209 (1568)
.+...+|+||..+. ...+.|| -..|+||++..+..+ ....+..++.+.|.+..
T Consensus 21 ~~~~e~f~le~~~~---------~~~v~lr-s~~GkYls~~~~G~v--~~~~~~~~~~~~F~i~~ 73 (111)
T PF06268_consen 21 LSDWETFQLEFDDG---------SYKVALR-SHNGKYLSVDSDGSV--VADSETPGPDEFFEIEW 73 (111)
T ss_dssp SSCGGSEEEEEETT---------EEEEEEE-CTTSEEEEEETTSEE--EEEESSSSGGGCBEEEE
T ss_pred CcccEEEEEEEECC---------CCEEEEE-cCCCCEEEEcCCCeE--EecCCCCCCCcEEEEEE
Confidence 34568999997654 2234577 579999999887643 33333456667777663
No 52
>PF08454 RIH_assoc: RyR and IP3R Homology associated; InterPro: IPR013662 This eukaryotic domain is found in ryanodine receptors (RyR) and inositol 1, 4, 5-trisphosphate receptors (IP3R) which together form a superfamily of homotetrameric ligand-gated intracellular Ca2+ channels []. There seems to be no known function for this domain []. Also see the IP3-binding domain IPR000699 from INTERPRO and IPR003608 from INTERPRO.
Probab=20.72 E-value=1.8e+02 Score=30.03 Aligned_cols=82 Identities=16% Similarity=0.333 Sum_probs=55.0
Q ss_pred ccccccccceeccchHHHHHHHHHHHHHHHHHHH---HHHhhhhhcccccccccccccHHHHHHHHHHHHhHccCCCcch
Q psy13309 274 EGKMDDGLDFSRSQEEESRTARVIRKCSSLFTQF---ISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDM 350 (1568)
Q Consensus 274 ~g~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~F---i~~L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~~~~~ 350 (1568)
|||--+--.+-|.+.+-.+..++|..++.+|..+ .+.+.. -+++-+.++++-|++|+..|.
T Consensus 22 Eghn~~lQnylR~Q~~~~~s~nlV~~~~~ll~~l~~~~~~~~~-------------~~~~~~~q~~~tL~E~iQGPC--- 85 (109)
T PF08454_consen 22 EGHNLDLQNYLRQQPNNKNSYNLVSETVDLLDSLQEFGKDINS-------------DNIELIIQCFDTLTEFIQGPC--- 85 (109)
T ss_pred CcCCHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHhhH-------------HHHHHHHHHHHHHHHHHcCCC---
Confidence 4444333333445555557788888888888876 333221 134568899999999998763
Q ss_pred hhHHHhhhhccchhhhhhhhhhhhHHHHHHHHh
Q psy13309 351 EHEEKQNRLRALRNRQDLFQEEGILNLILEAID 383 (1568)
Q Consensus 351 ~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd 383 (1568)
...|..+-+-.+++.+..+|.
T Consensus 86 ------------~eNQ~~l~~s~~~~~i~~lL~ 106 (109)
T PF08454_consen 86 ------------IENQIALANSKFLDIINDLLS 106 (109)
T ss_pred ------------HHhHHHHHHccHHHHHHHHHh
Confidence 334777778899999988883
No 53
>PF08569 Mo25: Mo25-like; InterPro: IPR013878 Mo25-like proteins are involved in both polarised growth and cytokinesis. In fission yeast Mo25 is localised alternately to the spindle pole body and to the site of cell division in a cell cycle dependent manner [, ]. ; PDB: 2WTK_A 1UPK_A 3GNI_A 1UPL_A.
Probab=20.32 E-value=3.9e+02 Score=32.92 Aligned_cols=152 Identities=12% Similarity=0.173 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccc----cccCCcccc
Q psy13309 329 LNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLV----NLAGDESGQ 404 (1568)
Q Consensus 329 l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~----~l~~ee~~~ 404 (1568)
.+++-+.|..+-..+....+....+++ ...-.|.++++ +.+.+|+..|..+.+.+. .+.. .+.......
T Consensus 38 ~eeisK~L~~mK~IL~G~~e~ep~~e~-----v~qLa~Ei~~~-dll~~Li~~L~~L~fEsr-Kdv~~if~~llr~~~~~ 110 (335)
T PF08569_consen 38 QEEISKYLQQMKEILYGDGEPEPNPEQ-----VAQLAQEIYRS-DLLYLLIRNLPKLDFESR-KDVAQIFSNLLRRQIGS 110 (335)
T ss_dssp HHHHHHHHHHHHHHHHS-SS----HHH-----HHHHHHHHHHH-THHHHHHHTGGGS-HHHH-HHHHHHHHHHHT--BTT
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCHHH-----HHHHHHHHHHh-CHHHHHHHHhhhCCCccc-ccHHHHHHHHHhhccCC
Confidence 456777888877777765443322221 33445667765 777777777766644311 1111 111111111
Q ss_pred ----hHHHHHHHHHHHHHHHHhhccchh-hhhhh------------------hhhHHHHHHHhcccccccCCCHHHHHHH
Q psy13309 405 ----SWDIISGYLYQLLAAIIKGNHTNC-AQFAN------------------TNRLNWLFSRLGSQASSEGTGMLDVLHC 461 (1568)
Q Consensus 405 ----~~~~I~~~iY~LL~~lirgN~~N~-~~fa~------------------~~~Ld~L~s~l~~~q~~iG~gildvL~~ 461 (1568)
.-..+.+..-.+|..+++|..... +...+ .+.+.-|+..++.--=.+..|.+.++.+
T Consensus 111 ~~~p~v~yl~~~~peil~~L~~gy~~~dial~~g~mlRec~k~e~l~~~iL~~~~f~~ff~~~~~~~Fdiasdaf~t~~~ 190 (335)
T PF08569_consen 111 RSPPTVDYLERHRPEILDILLRGYENPDIALNCGDMLRECIKHESLAKIILYSECFWKFFKYVQLPNFDIASDAFSTFKE 190 (335)
T ss_dssp B--HHHHHHHT--THHHHHHHHGGGSTTTHHHHHHHHHHHTTSHHHHHHHHTSGGGGGHHHHTTSSSHHHHHHHHHHHHH
T ss_pred CCCchHHHHHhCCHHHHHHHHHHhcCccccchHHHHHHHHHhhHHHHHHHhCcHHHHHHHHHhcCCccHhHHHHHHHHHH
Confidence 122233333444555555532111 01111 1112234444442111233355699999
Q ss_pred HHhCCHHHHhhccHHHHHHHHHHHHH
Q psy13309 462 VLIDSPEALNMMRDEHIKVIISLLEK 487 (1568)
Q Consensus 462 lL~nN~elLn~I~e~hI~~fIsLL~k 487 (1568)
+|..++++....-+.+.+.|+....+
T Consensus 191 llt~hk~~~a~fl~~n~d~ff~~~~~ 216 (335)
T PF08569_consen 191 LLTRHKKLVAEFLSNNYDRFFQKYNK 216 (335)
T ss_dssp HHHSSHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998875557777777776655
No 54
>KOG0946|consensus
Probab=20.03 E-value=1.1e+03 Score=32.11 Aligned_cols=114 Identities=14% Similarity=0.231 Sum_probs=66.4
Q ss_pred HhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhcc--chhhhhh
Q psy13309 355 KQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNH--TNCAQFA 432 (1568)
Q Consensus 355 kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~--~N~~~fa 432 (1568)
+|......+.---+.+.++.|.+|+..++.++++ +-.+.-+||.++++.-. -..+...
T Consensus 104 ~qsdd~g~~iae~fik~qd~I~lll~~~e~~DF~--------------------VR~~aIqLlsalls~r~~e~q~~ll~ 163 (970)
T KOG0946|consen 104 TQSDDLGLWIAEQFIKNQDNITLLLQSLEEFDFH--------------------VRLYAIQLLSALLSCRPTELQDALLV 163 (970)
T ss_pred hhhhHHHHHHHHHHHcCchhHHHHHHHHHhhchh--------------------hhhHHHHHHHHHHhcCCHHHHHHHHH
Confidence 3444455556667889999999999999876554 23455577777765321 1111222
Q ss_pred hhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHc
Q psy13309 433 NTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKH 488 (1568)
Q Consensus 433 ~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~ 488 (1568)
.+--|.-|...+..+..-|..+.+-.|.++..+|+.+-..+ -|+-.+.+.++++.-
T Consensus 164 ~P~gIS~lmdlL~DsrE~IRNe~iLlL~eL~k~n~~IQKlVAFENaFerLfsIIeeE 220 (970)
T KOG0946|consen 164 SPMGISKLMDLLRDSREPIRNEAILLLSELVKDNSSIQKLVAFENAFERLFSIIEEE 220 (970)
T ss_pred CchhHHHHHHHHhhhhhhhchhHHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHhc
Confidence 22223344444444444455556677788888888766533 355556666666553
Done!