Query psy13309
Match_columns 1568
No_of_seqs 484 out of 674
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 16:13:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13309.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13309hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xoa_A Ryanodine receptor 1; m 100.0 5.9E-78 2E-82 747.2 34.1 435 1-452 117-559 (559)
2 3uj4_A Inositol 1,4,5-trisphos 100.0 3E-60 1E-64 590.2 29.7 417 1-468 131-604 (604)
3 4esu_A Ryanodine receptor 1; p 100.0 8.9E-51 3E-55 444.0 16.4 201 752-978 2-209 (210)
4 4etv_A Ryanodine receptor 2; p 100.0 1.2E-50 4E-55 442.8 16.7 200 752-977 2-208 (209)
5 4erv_A Ryanodine receptor 3; m 100.0 2.2E-50 7.4E-55 440.5 15.8 199 752-977 2-206 (207)
6 1n4k_A Inositol 1,4,5-trisphos 100.0 4.1E-49 1.4E-53 469.8 25.5 340 95-468 1-381 (381)
7 3nrt_A Putative ryanodine rece 100.0 3.7E-30 1.3E-34 251.7 7.5 94 885-978 8-101 (103)
8 4etv_A Ryanodine receptor 2; p 99.9 2.9E-25 1E-29 242.8 9.7 96 886-981 3-98 (209)
9 4erv_A Ryanodine receptor 3; m 99.9 2.9E-25 9.8E-30 242.8 9.6 96 886-981 3-98 (207)
10 4esu_A Ryanodine receptor 1; p 99.9 1.1E-24 3.7E-29 238.5 9.0 95 886-980 3-97 (210)
11 3toj_A SET1/ASH2 histone methy 99.9 7.9E-24 2.7E-28 234.3 14.2 135 998-1147 38-199 (213)
12 3im6_A Cardiac Ca2+ release ch 99.9 3.3E-24 1.1E-28 229.1 8.2 88 1-88 129-217 (217)
13 2yyo_A SPRY domain-containing 99.9 9.5E-23 3.2E-27 218.3 12.6 118 998-1126 26-168 (171)
14 3nrt_A Putative ryanodine rece 99.9 6.9E-23 2.4E-27 200.5 7.0 94 753-866 9-102 (103)
15 1xzz_A Inositol 1,4,5-trisphos 99.8 2.4E-21 8.3E-26 217.6 7.7 87 1-88 146-238 (246)
16 3toj_A SET1/ASH2 histone methy 99.7 1.4E-17 4.9E-22 184.2 11.7 143 554-721 41-194 (213)
17 2yyo_A SPRY domain-containing 99.6 5.4E-16 1.9E-20 166.0 10.5 144 545-713 20-171 (171)
18 1t9f_A Protein 1D10; structura 99.5 4.4E-14 1.5E-18 153.2 14.8 130 41-187 2-148 (187)
19 2jk9_A SPRY domain-containing 99.4 1.7E-12 5.8E-17 143.4 13.3 110 999-1116 63-205 (212)
20 3emw_A SPRY domain-containing 99.3 3.1E-12 1.1E-16 141.9 13.0 110 999-1116 73-214 (217)
21 2afj_A Gene rich cluster, C9 g 99.1 3.6E-11 1.2E-15 134.2 7.3 108 1001-1116 72-211 (226)
22 3mal_A Stromal cell-derived fa 98.9 4.3E-09 1.5E-13 115.1 12.7 133 40-187 12-160 (199)
23 2jk9_A SPRY domain-containing 98.8 1.9E-08 6.4E-13 111.1 10.9 134 553-699 64-205 (212)
24 3emw_A SPRY domain-containing 98.7 2.8E-08 9.7E-13 110.2 10.1 129 554-698 75-213 (217)
25 3uj4_A Inositol 1,4,5-trisphos 98.5 9.2E-07 3.1E-11 111.0 17.8 185 42-254 111-319 (604)
26 2xoa_A Ryanodine receptor 1; m 98.5 1.5E-06 5.1E-11 108.6 17.9 199 26-253 62-295 (559)
27 2afj_A Gene rich cluster, C9 g 98.3 6.6E-07 2.3E-11 99.8 8.4 132 554-701 72-213 (226)
28 1t9f_A Protein 1D10; structura 97.6 0.00024 8.2E-09 77.1 11.5 121 14-156 36-177 (187)
29 3mal_A Stromal cell-derived fa 97.4 0.00057 2E-08 74.8 11.3 123 14-156 47-189 (199)
30 1n4k_A Inositol 1,4,5-trisphos 96.6 0.0033 1.1E-07 75.3 8.8 133 43-187 8-181 (381)
31 2e63_A KIAA1787 protein; struc 92.5 0.39 1.3E-05 51.3 9.4 96 1016-1113 51-166 (170)
32 3grl_A General vesicular trans 89.1 0.22 7.4E-06 63.0 4.1 175 360-563 195-389 (651)
33 1xzz_A Inositol 1,4,5-trisphos 88.5 0.85 2.9E-05 51.4 8.0 84 159-254 124-213 (246)
34 3uv9_A TRIM5alpha, tripartite 87.3 0.95 3.2E-05 48.8 7.2 100 1009-1108 46-174 (186)
35 2vok_A 52 kDa RO protein; poly 85.9 1.6 5.3E-05 47.3 8.0 100 1007-1107 56-170 (188)
36 3grl_A General vesicular trans 85.1 2.1 7.2E-05 54.2 9.7 170 328-521 75-255 (651)
37 1q1u_A FGF-12, fibrobast growt 82.1 2.6 9E-05 43.7 7.4 59 114-191 11-74 (144)
38 2wl1_A Pyrin, marenostrin; amy 81.0 2.9 9.9E-05 45.2 7.6 100 1008-1108 61-175 (191)
39 3im6_A Cardiac Ca2+ release ch 79.5 6.2 0.00021 43.2 9.3 101 37-155 104-216 (217)
40 2fbe_A Predicted: similar to R 75.9 6.9 0.00024 42.6 8.7 99 1008-1107 58-171 (201)
41 3uv9_A TRIM5alpha, tripartite 74.3 9.7 0.00033 40.9 9.2 44 645-689 126-172 (186)
42 2p39_A Fibroblast growth facto 67.8 11 0.00039 39.5 7.6 62 113-190 13-78 (155)
43 3q7x_A De novo designed beta-t 64.1 21 0.00071 36.4 8.6 85 134-253 18-107 (132)
44 3hbw_A Fibroblast growth facto 60.9 10 0.00034 41.2 5.8 64 103-191 12-80 (193)
45 4hxt_A De novo protein OR329; 60.5 26 0.00088 37.3 9.2 117 366-504 37-158 (252)
46 2e63_A KIAA1787 protein; struc 59.7 8.4 0.00029 41.0 4.9 65 617-687 91-158 (170)
47 3p6i_A De novo designed beta-t 58.7 33 0.0011 35.4 9.0 81 135-251 54-140 (142)
48 1bfg_A Basic fibroblast growth 58.3 13 0.00045 38.6 6.0 60 113-190 18-82 (146)
49 3llp_A Fascin; beta-trefoil, a 55.1 57 0.0019 40.2 11.8 111 51-208 141-257 (493)
50 2wl1_A Pyrin, marenostrin; amy 54.4 34 0.0012 36.8 8.7 44 646-690 129-174 (191)
51 3snv_A Symfoil-4T/permutation 53.9 52 0.0018 33.9 9.6 85 134-253 21-110 (143)
52 2vok_A 52 kDa RO protein; poly 53.8 28 0.00096 37.4 7.9 45 646-690 124-170 (188)
53 4db8_A Armadillo-repeat protei 53.3 14 0.00048 39.8 5.6 119 362-502 127-250 (252)
54 2fdb_M FGF8B, fibroblast growt 51.0 19 0.00063 38.2 5.8 47 135-190 43-94 (164)
55 4db6_A Armadillo repeat protei 49.9 19 0.00065 37.6 5.8 117 365-503 88-209 (210)
56 1nun_A Fibroblast growth facto 49.6 22 0.00076 36.8 6.0 47 135-191 27-78 (145)
57 1rg8_A Heparin-binding growth 49.4 21 0.00072 37.0 5.8 48 134-191 28-80 (146)
58 4hxt_A De novo protein OR329; 48.2 25 0.00084 37.5 6.5 120 363-504 76-200 (252)
59 1ijt_A FGF4, fibroblast growth 47.9 24 0.00083 35.7 5.9 34 147-190 34-67 (128)
60 3kb5_A Tripartite motif-contai 46.7 13 0.00044 40.1 3.9 45 1008-1052 61-107 (193)
61 1qql_A Fibroblast growth facto 46.2 23 0.0008 36.4 5.5 47 134-190 22-73 (140)
62 1ihk_A GLIA-activating factor; 45.9 24 0.00081 37.7 5.7 47 135-191 40-91 (174)
63 3f1r_A FGF-20, fibroblast grow 40.8 34 0.0012 37.6 6.0 37 145-191 92-128 (211)
64 3p6j_A De novo designed beta-t 38.4 89 0.003 32.2 8.4 73 145-252 59-131 (142)
65 1pwa_A FGF-19, fibroblast grow 38.2 30 0.001 36.6 4.9 36 145-190 40-75 (162)
66 2yue_A Protein neuralized; str 38.1 61 0.0021 34.3 7.3 89 1017-1114 51-159 (168)
67 4db6_A Armadillo repeat protei 37.8 45 0.0015 34.7 6.4 117 366-504 47-168 (210)
68 1xqr_A HSPBP1 protein; armadil 36.9 51 0.0018 37.7 7.1 121 363-504 114-239 (296)
69 2p23_A FGF-19, fibroblast grow 34.5 37 0.0013 36.9 5.0 36 145-190 52-87 (194)
70 4b3n_A Maltose-binding peripla 34.1 52 0.0018 41.2 7.2 44 1009-1052 466-516 (602)
71 1xqr_A HSPBP1 protein; armadil 31.8 1.4E+02 0.0047 34.1 9.6 89 363-471 157-245 (296)
72 2yue_A Protein neuralized; str 30.5 49 0.0017 35.1 5.1 44 645-689 107-150 (168)
73 4db8_A Armadillo-repeat protei 30.3 62 0.0021 34.6 6.1 117 367-505 48-169 (252)
74 1ups_A Glcnac-alpha-1,4-GAL-re 28.2 90 0.0031 37.6 7.5 71 148-253 324-395 (420)
75 2fbe_A Predicted: similar to R 25.6 68 0.0023 34.8 5.3 45 646-690 126-171 (201)
76 2yug_A Protein FRG1; spliceoso 23.4 1.7E+02 0.006 30.3 7.7 70 146-253 59-128 (155)
77 2z6g_A B-catenin; FULL-length, 22.8 1.4E+02 0.0046 38.7 8.3 118 368-506 229-351 (780)
78 2z6h_A Catenin beta-1, beta-ca 21.1 1.6E+02 0.0054 36.9 8.1 120 365-506 91-215 (644)
79 1jdh_A Beta-catenin; beta-cate 20.7 1.7E+02 0.006 34.7 8.2 119 365-505 94-217 (529)
No 1
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=100.00 E-value=5.9e-78 Score=747.22 Aligned_cols=435 Identities=48% Similarity=0.833 Sum_probs=331.3
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccCCCCceEEEeeec
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTKENDLSVVNASFH 79 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~~~~EVnaS~~ 79 (1568)
||+|++++ |+.||+||+|+|+++.++++|||+|+|+||+|++||+|++||+|+|+++++++|||+|..+++.||+++++
T Consensus 117 ~L~~~~~~~s~~ek~a~~V~L~~~~~~~~s~f~I~p~~k~r~~G~~V~~Gd~V~L~~~~t~~~LH~S~~~gs~eVt~~d~ 196 (559)
T 2xoa_A 117 YLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASKQRSEGEKVRVGDDLILVSVSSERYLHLSTASGELQVDASFM 196 (559)
T ss_dssp EEEECSCCC----CCCEEEEEESSCCSSTTEEEEEESSTTSCTTSBCBTTCEEEEEETTTCCEEEEEC----CEEEEESS
T ss_pred EEEEcCcCcccccccceEEEEEecCCCCCcEEEEEcCccccCCCCccccCCEEEEEECCCCCcccccCCCCCeEEEeccC
Confidence 79999999 99999999999996699999999999999999999999999999999999999999999889999999999
Q ss_pred eeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCc----cCc-cccceeEEEEecCccccCCcceEEEe
Q psy13309 80 VTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLIC----PDR-SKYLFHIVVYEGGSVMSQARSLWRLE 154 (1568)
Q Consensus 80 ~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~----~~~-~~~~~~v~~~e~g~~~tsa~sLWeIE 154 (1568)
+|.|+|.+|+++. + .++|+| ||||||||++.+. ... ++.+.+++.|.++...++++++|+||
T Consensus 197 nt~W~I~~~~~~~------~--~~~l~~-----GDvIRL~H~~t~~~L~~~~~~s~~~~ev~~y~~~~~~~d~~~~W~VE 263 (559)
T 2xoa_A 197 QTLWNMNPICSCC------E--EGYVTG-----GHVLRLFHGHMDECLTISAADSDDQRRLVYYEGGAVCTHARSLWRLE 263 (559)
T ss_dssp CCCEEEEEEECCC------C--TTBCBT-----TCEEEEECC---CEEEECCTTCTTTTCBEEEECGGGGGSGGGCEEEE
T ss_pred CCeEEEEEcccCC------c--cccccC-----CCEEEEEecCCCceeeccCCCcccceEEEeecCCCcCCCCCceEEEE
Confidence 9999999995532 2 567777 8999999999641 111 23456799999998889999999999
Q ss_pred ecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeeccccccccccccccccccCCcceeeC
Q psy13309 155 LARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYG 234 (1568)
Q Consensus 155 ~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~~~~I~~g 234 (1568)
+++.+|+||.+.|++.|||||++||+||++.++.++++++.+++++..++|||++++++.+. ..++|.++|++++|.++
T Consensus 264 ~v~~~~~G~~~~~~~~fRLrH~~TG~YL~~~~~~~~~~~~~~~~~~~~s~F~f~~~~~~~~~-~~~~d~~~~~~~~i~~~ 342 (559)
T 2xoa_A 264 PLRISWSGSHLRWGQPLRIRHVTTGRYLALTEDQGLVVVDACKAHTKATSFCFRVSKEKLDT-APKRDVEGMGPPEIKYG 342 (559)
T ss_dssp ESCSTTTTSBCCTTCCEEEEETTTCCEEEEETTTEEEEECGGGCCHHHHCEEEESSSSCC-----CCCCSSSCCCCCBTT
T ss_pred EeccccCCCceEeCCeEEEEECCcCCeeeEcCCCCcccccccccCCCccEEEEeecCCcccc-ccccccccccCceEeec
Confidence 99999999999999999999999999999998877777777778888999999998776543 24666688999999999
Q ss_pred CcEEEEEEcccCeeeEeeecccccccCChhhhhceEeccccccccccceeccchHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy13309 235 DSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEGKMDDGLDFSRSQEEESRTARVIRKCSSLFTQFISGLEAL 314 (1568)
Q Consensus 235 dSyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~Fi~~L~~~ 314 (1568)
||||||||++||+|||+++.+.+...+|.. +++|+++++|+|+|+|+|++|+.+|+|+++||++|+++|++|+++|+..
T Consensus 343 ds~vrl~H~~T~~WL~~~~~~~~~~~i~~~-~~~~vl~~~g~~~d~F~i~~~~~~e~~e~~~i~~~~~~l~~fi~~L~~~ 421 (559)
T 2xoa_A 343 ESLCFVQHVASGLWLTYAAPDPKALRLGVL-KKKAILHQEGHMDDALFLTRCQQEESQAARMIHSTAGLYNQFIKGLDSF 421 (559)
T ss_dssp TCCBEEEETTTCCEEEECC---------CC-EEEEEEESSCCTTCCBEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecCCCeEeeccccccccccCcc-ceeeeeeeccccccceEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999876665566665 6789999999999999999999999999999999999999999999976
Q ss_pred h-cccccc-cccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCcc
Q psy13309 315 Q-VNRRHS-LFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQG 392 (1568)
Q Consensus 315 ~-~~~~~~-~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~ 392 (1568)
+ +++... .-+...+++.++++|+|||+||.++.++++|++||+.++|+|+|||||||||||++|++||++++.+++..
T Consensus 422 ~~~~~~~~~~~~~~~~~~~v~~~L~dLi~F~~~~~~~~~~~~~q~~~~~~r~RQkLlrEq~il~ll~~il~~l~~~~~~~ 501 (559)
T 2xoa_A 422 SGKPRGSGPPAGPALPIEAVILSLQDLIGYFEPPSEELQHEEKQSKLRSLRNRQSLFQEEGMLSLVLNCIDRLNVYTTAA 501 (559)
T ss_dssp SSCCC---------CCHHHHHHHHHHHHHHTCCC---------CCHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTSCC--
T ss_pred ccccccccccccccccHHHHHHHHHHHHHHhcCccccccchhccccccccHHHHHHHhhhchHHHHHHHHHHhhccCchh
Confidence 3 322211 00235679999999999999999988778889999999999999999999999999999999999888888
Q ss_pred ccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccC
Q psy13309 393 FLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEG 452 (1568)
Q Consensus 393 ~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG 452 (1568)
+++++++++..+.|++|++++|+||+++||||+.||+|++. +|+||++++++++++.|
T Consensus 502 ~~~~~~~~~~~~~~~~i~~~~Y~LL~~~i~~N~~N~~y~~~--~l~~l~~~l~~~~~~~~ 559 (559)
T 2xoa_A 502 HFAEYAGEEAAESWKEIVNLLYELLASLIRGNRANCALFST--NLDWVVSKLDRLEASSG 559 (559)
T ss_dssp ----CCCSTGGGTHHHHHHHHHHHHHHHHCC-----------------------------
T ss_pred hHHHhhcchhHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH--HHHHHHHHhccccccCC
Confidence 99999999988999999999999999999999999998885 59999999999988765
No 2
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=100.00 E-value=3e-60 Score=590.16 Aligned_cols=417 Identities=21% Similarity=0.305 Sum_probs=277.7
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccC-----CCCceEE
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTK-----ENDLSVV 74 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~-----~~~~~EV 74 (1568)
||+|++++ |++||+||+|+|++ .++++|||+|+|+||+|++||+|++||.|+|+++++|.|||.+. .++..||
T Consensus 131 yL~~~~~~~a~~e~~~~~V~L~~-~~~e~s~F~I~P~~k~~~eGe~V~~Gd~V~L~~~~tg~~LHSh~~~yp~gS~qQqV 209 (604)
T 3uj4_A 131 YLTVNKRLPALLEKNAMRVTLDE-AGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGANEV 209 (604)
T ss_dssp EEEEEEEEECSSSTTCEEEEEES-SCCGGGCEEEEESSTTSCTTSBCBTTCEEEEEESSSCSCEEEEEEECSSSTTCEEE
T ss_pred EEEEcCCCcccccCCceEEEEEe-cCCCCeEEEEecCcccccCCCeEeeCCEEEEEEcCCCCcEEeecccCCCCCCceEE
Confidence 79999877 99999999999997 99999999999999999999999999999999999999999764 3579999
Q ss_pred EeeeceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCccCccc---cceeEEEEecCc----cccCC
Q psy13309 75 NASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICPDRSK---YLFHIVVYEGGS----VMSQA 147 (1568)
Q Consensus 75 naS~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~~~~~---~~~~v~~~e~g~----~~tsa 147 (1568)
++++.+|.|+|.++.++. +...++|++ ||||||+|.+....-.+. ...+...+.+|. ...++
T Consensus 210 t~~D~Nn~W~I~~~~~~~------~~~~~~Vk~-----GDvIRL~H~~T~~~LhSH~~~~P~~~~~eVs~yg~~~~~gd~ 278 (604)
T 3uj4_A 210 NSVNANTSWKIVLFMKWS------DNKDDILKG-----GDVVRLFHAEQEKFLTADEHRKKQHVFLRTTGRQSATSATSS 278 (604)
T ss_dssp EESSCCCEEEEEEEECGG------GCCTTBCBT-----TCEEEEEETTTTEEEEEEEETTEEEEEEECCC--CTTCCCCG
T ss_pred EEEcCCCeEEEEecCCCC------cccCccccc-----CCEEEEEECCCCCCeecCCCCCCCcceEEEeecccccCCCCC
Confidence 999999999999995532 223445555 999999999975322111 123445555553 35789
Q ss_pred cceEEEeecccc-cCCccceecCceEEEEcCCCceeeeeecCccc-------------------------------cccc
Q psy13309 148 RSLWRLELARTK-WAGGFINWYHPMRIRHLTTGRYLSTNENNELY-------------------------------LVTR 195 (1568)
Q Consensus 148 ~sLWeIE~~~~~-~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~-------------------------------l~~~ 195 (1568)
+++|+||+++.. |+|+.+.|++.|||||++||.||++.++..+. ++..
T Consensus 279 ndlW~IEi~~~~~~~G~~~~~~s~fRLrH~~Tg~YL~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Lv~~ 358 (604)
T 3uj4_A 279 KALWEVEVVQHDPARGGAGYWNSLFRFKHLATGHYLAAEVDPDFEEEALEFQPSVDPDQDASRSRLRNAQEKMVYSLVSV 358 (604)
T ss_dssp GGEEEEEECCSSTTCCCBCBTTCEEEEEETTTCCEEEEEEC--------------------------------CEEEEEE
T ss_pred CCeEEEEEecCCcCCCCeEEecCeEEEEEcccCceeeeccCcccccccccccccccccccccccccccCCCceeEEEEec
Confidence 999999999864 89999999999999999999999998763110 0011
Q ss_pred cccCCCCcceEeeccccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEeeecccccccCChhhhhceEecccc
Q psy13309 196 DEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEG 275 (1568)
Q Consensus 196 ~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g 275 (1568)
....+.++.|.|.++. ..........||||||+|++||+|||+++++. +.. +.+|+|++.|
T Consensus 359 ~~~~~~~slF~l~~~~-------------~~~~~~~v~~~Syvrl~h~~t~~Wv~~~~~~~-----~~~-~~~p~~~~~~ 419 (604)
T 3uj4_A 359 PEGNDISSIFELDPTT-------------LRGGDSLVPRNSYVRLRHLATNTWVHSTNIPI-----DKE-EEKPVMLKIG 419 (604)
T ss_dssp SCSCSGGGCEEEEESS-------------CCSSCSBCBTTCEEEEEETTTTEEEEEEEEES-----CSS-SSSCCEEEEE
T ss_pred cCCCCcccEEEEeccc-------------cccccccccCCCEEEEEEcccCceEccccccc-----ccc-ccchhHhhhc
Confidence 1111112333332211 00111233448999999999999999987653 333 3478888544
Q ss_pred -----ccccccceeccchHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccccccccHHHHHHHHHHHHhHccCC-Ccc
Q psy13309 276 -----KMDDGLDFSRSQEEESRTARVIRKCSSLFTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQP-EED 349 (1568)
Q Consensus 276 -----~~dD~f~~~~v~~eEvrd~~~i~s~~~~l~~Fi~~L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~-~~~ 349 (1568)
.++|+|+|..|+.+|||+++|+.+|+++|..|++.|+.+.... . ....++++|+||+.||.+. +..
T Consensus 420 ~~~~k~d~~aF~i~~v~~~ev~d~~f~~~~~~~L~~~~~~l~~~~i~~-~-------~~~~~~~~L~dl~~F~~~~~n~~ 491 (604)
T 3uj4_A 420 TSPLKEDKEAFAIVPVSPAEVRDLDFANDASKVLGSIAGKLEKGTITQ-N-------ERRSVTKLLEDLVYFVTGGTNSG 491 (604)
T ss_dssp EESSCC--CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCH-H-------HHHHHHHHHHHHHHHCC------
T ss_pred cccccchhheEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHhhcCcccH-H-------HHHHHHHHHHHHHHHHhCcCcCc
Confidence 5689999999999999999999999999999999998752211 0 1234899999999999973 223
Q ss_pred hhhHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCccc----chHHHHHHHHHHHHHHHHhhcc
Q psy13309 350 MEHEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESG----QSWDIISGYLYQLLAAIIKGNH 425 (1568)
Q Consensus 350 ~~he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~----~~~~~I~~~iY~LL~~lirgN~ 425 (1568)
.+ ...+..++|+|+||||||||+||++|++||..++... +..+.+..++.. ..++.||++||+||+.++.+|+
T Consensus 492 ~~-~l~~~~g~pnr~RQKLlREQ~il~~l~~iL~~~f~~~--~~~~~~~l~~l~~~~~~~~~~i~~l~Y~~L~~~~~~~r 568 (604)
T 3uj4_A 492 QD-VLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTDA--GDGPMLRLEELGDQRHAPFRHIARLAYRVLRHSQQDYR 568 (604)
T ss_dssp ----------CCCHHHHHHHHHTTHHHHHHHHTC----------------------------CHHHHHHHHHHHTTTTCH
T ss_pred cc-hhhcccCCcCHHHHHHHHhhhHHHHHHHHHhcccCCc--CccchhhHHhhhcccchHHHHHHHHHHHHHHHHHHHhH
Confidence 22 3345689999999999999999999999997765332 222223333332 3466699999999999999999
Q ss_pred chhhhhhhhhhHHHHHHHhcccccccCCCHH--HHHHHHHhCCHH
Q psy13309 426 TNCAQFANTNRLNWLFSRLGSQASSEGTGML--DVLHCVLIDSPE 468 (1568)
Q Consensus 426 ~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gil--dvL~~lL~nN~e 468 (1568)
.|++|.+ ++++.||.||||+++ |+|++||+||++
T Consensus 569 kNQeyia---------k~~~~~q~qigy~~~a~dtit~ll~nN~k 604 (604)
T 3uj4_A 569 KNQEYIA---------KQFGFMQKQIGYDVLAEDTITALLHNNRK 604 (604)
T ss_dssp HHHHHHH---------CC---------------------------
T ss_pred HhHHHHH---------HHHHHHHHHhCccchHHHHHHHHHhcCCC
Confidence 9997433 445566666777755 999999999985
No 3
>4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A
Probab=100.00 E-value=8.9e-51 Score=444.01 Aligned_cols=201 Identities=29% Similarity=0.528 Sum_probs=173.0
Q ss_pred CCCcccccccccccccchhhhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhcc
Q psy13309 752 DTAFVPTPVDTSMITLPHYVENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSR 831 (1568)
Q Consensus 752 ~~~f~P~PVdTs~v~Lp~~l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~ 831 (1568)
++.|+|.||||++|+||+.|++|+|+||||+||+|+++|+++||+||+++||..|+||||+||+.||+ .+|++
T Consensus 2 ~~~f~P~PVdt~~v~lp~~l~~l~eklAe~~He~W~~~k~~~GW~yG~~~dd~~k~HP~L~p~~~L~e----~eK~~--- 74 (210)
T 4esu_A 2 NANFDPRPVETLNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWMYGENVDEELKTHPMLRPYKTFSE----KDKEI--- 74 (210)
T ss_dssp --CCCCCCCCCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCEECSSCBTTTTEETTCSCGGGCCH----HHHHH---
T ss_pred CCCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCcccccccccCcccCChhhCCH----HHHHH---
Confidence 56899999999999999999999999999999999999999999999999999999999999999998 33332
Q ss_pred ccccccccccCCcchhhhhhhhhHHHhccceeecCCCCCcc--c---cccCC--CCCCCCCCCCccccccCcccccChhh
Q psy13309 832 IRSETSILFYHPPRVKFHAKVLPTILAIGYHISMDKPPSRI--K---TVRLP--NEPFMQPNGYKPAPLDLSAIALTPKM 904 (1568)
Q Consensus 832 ~~~e~~~~~Y~~~~~~~~~e~LktllalG~~i~~~~~~~~~--~---~~~lp--~~~~~~~~~y~P~PvD~s~v~L~~~~ 904 (1568)
++..+.++||+|+|+||+|+.++++++. + ..+|| .+.|+++++|+|+|+|+|+|+|++++
T Consensus 75 -------------~r~~~~e~lk~llalG~~I~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~y~P~P~d~s~v~L~~~~ 141 (210)
T 4esu_A 75 -------------YRWPIKESLKAMIAWEWTIEKAREGEEERTEKKKTRKISQTAQTYDPREGYNPQPPDLSGVTLSREL 141 (210)
T ss_dssp -------------HHHHHHHHHHHHHHTTCEEEECSCCCC-----------------------CCCCCCCCTTCCCCHHH
T ss_pred -------------HHHHHHHHHHHHHHccceeeecCcchhhhhhccccccccccccccccccCCCCCCccccccccCHHH
Confidence 3556888899999999999999887652 2 22454 23578899999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHccceecC
Q psy13309 905 EELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNLDP 978 (1568)
Q Consensus 905 ~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i~~ 978 (1568)
++++|+||||.||+||++|+.+||++| .|+||+||||+.||+.+|++||++++|++|+|+.+||+|..
T Consensus 142 ~~~ve~LAen~H~vWA~~r~~~~~~~g------~~~hP~LVPy~~L~e~eK~~dR~~~~e~~k~l~~~Gy~i~r 209 (210)
T 4esu_A 142 QAMAEQLAENYHNTWGRKKKQELEAKG------GGTHPLLVPYDTLTAKEKARDREKAQELLKFLQMNGYAVTR 209 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT------CCCCTTCSCGGGSCHHHHHHHHHHHHHHHHHHHHTTEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCCccChHhcCHHHHHHhHHHHHHHHHHHHHcCeeeec
Confidence 999999999999999999999999998 69999999999999999999999999999999999999853
No 4
>4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus}
Probab=100.00 E-value=1.2e-50 Score=442.78 Aligned_cols=200 Identities=31% Similarity=0.551 Sum_probs=175.6
Q ss_pred CCCcccccccccccccchhhhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhcc
Q psy13309 752 DTAFVPTPVDTSMITLPHYVENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSR 831 (1568)
Q Consensus 752 ~~~f~P~PVdTs~v~Lp~~l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~ 831 (1568)
++.|+|.||||++|+||+.|+.++|+||||+||+|+++|+++||+||+++||..|+||||+||+.||+ .+|++
T Consensus 2 ~~~~~P~Pvdts~v~Lp~~l~~l~eklAe~~He~Wa~~k~~~GW~yG~~~dd~~k~HP~Lvp~~~L~e----~eK~~--- 74 (209)
T 4etv_A 2 NANFNPQPVDTSNITIPEKLEYFINKYAEHSHDKWSMDKLANGWIYGEIYSDSSKIQPLMKPYKLLSE----KEKEI--- 74 (209)
T ss_dssp ---CCCCCCCCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCBCCSSCBTTTTBCTTCSCGGGSCH----HHHHH---
T ss_pred CCCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCccccccccCCcccCChhhCCH----HHHHH---
Confidence 57899999999999999999999999999999999999999999999999999999999999999998 43332
Q ss_pred ccccccccccCCcchhhhhhhhhHHHhccceeecCCCCCc----cccccCCCCC---CCCCCCCccccccCcccccChhh
Q psy13309 832 IRSETSILFYHPPRVKFHAKVLPTILAIGYHISMDKPPSR----IKTVRLPNEP---FMQPNGYKPAPLDLSAIALTPKM 904 (1568)
Q Consensus 832 ~~~e~~~~~Y~~~~~~~~~e~LktllalG~~i~~~~~~~~----~~~~~lp~~~---~~~~~~y~P~PvD~s~v~L~~~~ 904 (1568)
++..+.++||+|+|+||+|+..+++++ .++.+|+... +.++++|+|+|+|+|+|+|++++
T Consensus 75 -------------~r~~~~e~lk~llalG~~I~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~y~P~P~dls~v~l~~~~ 141 (209)
T 4etv_A 75 -------------YRWPIKESLKTMLAWGWRIERTREGDSMALYNRTRRISQTSQVSIDAAHGYSPRAIDMSNVTLSRDL 141 (209)
T ss_dssp -------------HHHHHHHHHHHHHHTTCEEEECSSCCGGGGCC--------------CGGGCCCCCCCGGGCCCCHHH
T ss_pred -------------HHHHHHHHHHHHHHcCceeeecCCcchhhhhcccccccccccccccccCCCCCCCccccccccCHHH
Confidence 456788889999999999999887664 4566777652 23689999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHccceec
Q psy13309 905 EELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNLD 977 (1568)
Q Consensus 905 ~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i~ 977 (1568)
++++|+||||.||+||++|+.+||+|| .|+||+||||+.||+.+|++||++++|++|+|+.+||+|.
T Consensus 142 ~~~ve~LAen~H~vWa~~r~~~~~~~g------~~~hP~LVPy~~L~~~eK~~dR~~a~e~~k~l~~~Gy~i~ 208 (209)
T 4etv_A 142 HAMAEMMAENYHNIWAKKKKLELESKG------GGNHPLLVPYDTLTAAEKAKDREKAQDIFKFLQISGYVVS 208 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT------CCCCTTCSCGGGSCHHHHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC------CCCCCCccChHhcCHHHHHHhHHHHHHHHHHHHHccceee
Confidence 999999999999999999999999999 6899999999999999999999999999999999999984
No 5
>4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=440.51 Aligned_cols=199 Identities=32% Similarity=0.530 Sum_probs=172.9
Q ss_pred CCCcccccccccccccchhhhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhcc
Q psy13309 752 DTAFVPTPVDTSMITLPHYVENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSR 831 (1568)
Q Consensus 752 ~~~f~P~PVdTs~v~Lp~~l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~ 831 (1568)
++.|+|.||||++|+||+.|+.|+|+||||+||+|+++|+++||+||+++||.+|+||||+||+.||+ .+|++
T Consensus 2 ~~~~~P~Pvdts~v~lp~~l~~l~eklAe~~He~Wa~~k~~~GW~yG~~~dd~~k~HP~Lvp~~~L~e----~eK~~--- 74 (207)
T 4erv_A 2 NANFDPKPINTMNFSLPEKLEYIVTKYAEHSHDKWACDKSQSGWKYGISLDENVKTHPLIRPFKTLTE----KEKEI--- 74 (207)
T ss_dssp ---CCCCCCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCSSCBTTTTBCTTCSCGGGSCH----HHHHH---
T ss_pred CCCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCcccccccccCcccCChhhCCH----HHHHH---
Confidence 56999999999999999999999999999999999999999999999999999999999999999998 43332
Q ss_pred ccccccccccCCcchhhhhhhhhHHHhccceeecCCCCCcc------ccccCCCCCCCCCCCCccccccCcccccChhhH
Q psy13309 832 IRSETSILFYHPPRVKFHAKVLPTILAIGYHISMDKPPSRI------KTVRLPNEPFMQPNGYKPAPLDLSAIALTPKME 905 (1568)
Q Consensus 832 ~~~e~~~~~Y~~~~~~~~~e~LktllalG~~i~~~~~~~~~------~~~~lp~~~~~~~~~y~P~PvD~s~v~L~~~~~ 905 (1568)
++..+.++||+|+|+||+|+..+++++. ++++.+..+ .++++|+|+|+|+|+|+|+++++
T Consensus 75 -------------~r~~~~e~lk~lla~G~~I~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~P~P~Dls~v~Ls~~~~ 140 (207)
T 4erv_A 75 -------------YRWPARESLKTMLAVGWTVERTKEGEALVQQRENEKLRSVSQA-NQGNSYSPAPLDLSNVVLSRELQ 140 (207)
T ss_dssp -------------HHHHHHHHHHHHHHTTCEEEECC-CTTHHHHHHHHHHCCC---------CCCCCCCGGGCCCCHHHH
T ss_pred -------------HHHHHHHHHHHHHHcCceEeecCCcchhhhccchhhccccccc-ccccCCCCCCccccccccCHHHH
Confidence 3556888899999999999999887531 234433332 37899999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHHHHHHHHccceec
Q psy13309 906 ELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASETVRTLLVYGYNLD 977 (1568)
Q Consensus 906 ~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~lk~ll~~Gy~i~ 977 (1568)
+++|+||||.||+||++|+.+||+|| .|+||+||||+.||+.+|++||+++++++|+|+.+||+|.
T Consensus 141 ~lve~LAen~H~vWa~~r~~~~~~~g------~~~hP~LVPy~~L~~~eK~~dR~~a~e~~k~L~~~Gy~i~ 206 (207)
T 4erv_A 141 GMVEVVAENYHNIWAKKKKLELESKG------GGSHPLLVPYDTLTAAEKFKDREKAQDLFKFLQVNGIIVS 206 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT------CCCCTTCSCGGGSCHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc------CCCCCCccChHhcCHHHHHHhHHHHHHHHHHHHHhcceee
Confidence 99999999999999999999999998 6999999999999999999999999999999999999984
No 6
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=100.00 E-value=4.1e-49 Score=469.82 Aligned_cols=340 Identities=18% Similarity=0.275 Sum_probs=216.0
Q ss_pred ccccccccccccCCCCCCCcEEEEccCCCCcc----CccccceeEEEEecCc----cccCCcceEEEeeccc-ccCCccc
Q psy13309 95 MKYVMCLEVMSCGSSTEVTNVSLYLHPGLICP----DRSKYLFHIVVYEGGS----VMSQARSLWRLELART-KWAGGFI 165 (1568)
Q Consensus 95 ~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~----~~~~~~~~v~~~e~g~----~~tsa~sLWeIE~~~~-~~~GG~v 165 (1568)
|+|.++..++|+| ||||||||++.+.. .+.. ...+.+..+|. ..++++++|+||.++. +|+||++
T Consensus 1 ~~~~~~~~~~v~~-----GdvIRL~H~~t~~~Lhs~~~~~-~~~v~~~~s~~~s~~~~~d~~s~W~IE~~~~~~~~G~~~ 74 (381)
T 1n4k_A 1 MKWSDNKDDILKG-----GDVVRLFHAEQEKFLTCDEHRK-KQHVFLRTTGRQSATSATSSKALWEVEVVQHDPCRGGAG 74 (381)
T ss_dssp ------------C-----CCEEEEEETTTTEEEEEEECSS-SEEEEEECCCSSSGGGCCCGGGCEEEEECC---------
T ss_pred CCcccccCCcccC-----CcEEEEEEcccCCeeecCCCCC-ccceeeeccCccCCCCCCCCCCeEEEEEeccCCCCCCce
Confidence 4567777788888 89999999997522 2222 22333334553 2468999999999984 7999999
Q ss_pred eecCceEEEEcCCCceeeeeecCcccccccc-c----cC-----------CCCcceEeeccccccccccccccccccCCc
Q psy13309 166 NWYHPMRIRHLTTGRYLSTNENNELYLVTRD-E----AT-----------TASSTFCLRQEKDDQKIVLEDKDLEVIGAP 229 (1568)
Q Consensus 166 ~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~-~----a~-----------~~~T~F~f~~~ke~~~~v~~~~di~~m~~~ 229 (1568)
+|++.|||||++||+||++.++.++...+.+ . ++ ..++.|||++++++.+. ..+-.||++
T Consensus 75 ~~~~~fRLrH~~Tg~yL~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~l~~~~~~~d~----~s~f~l~~~ 150 (381)
T 1n4k_A 75 YWNSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDI----SSIFELDPT 150 (381)
T ss_dssp ----CEEEEETTTCCEEEEEEC-------------------------------CCEEEEEESCSCSG----GGCEEEEC-
T ss_pred eeCCeEEEEECCCCceeeEEecCcccccccccccccccccccccccccCCCcCceEEEEecCccCCc----hhhhccCcc
Confidence 9999999999999999999987754332221 0 11 23788999987643221 111227888
Q ss_pred ceeeCC------cEEEEEEcccCeeeEeeecccccccCChhhhhceEecccc-----ccccccceeccchHHHHHHHHHH
Q psy13309 230 IIKYGD------STVLVQHSENGLWLTYKSYETKKKGLGKVEEKQAVLHEEG-----KMDDGLDFSRSQEEESRTARVIR 298 (1568)
Q Consensus 230 ~I~~gd------SyvrIqH~~Tg~WL~~~~~~~~~~~~~~~e~~k~il~~~g-----~~dD~f~~~~v~~eEvrd~~~i~ 298 (1568)
+|+++| |||||||++||+|||+++.. ++.. +++|+|++.+ .++|+|+|..|+.+|+||++|+.
T Consensus 151 ~~~~~d~~v~~~Sy~rl~H~~t~~Wl~~~~~~-----~~~~-~~~~~l~~l~~~~~~e~~~aF~I~~v~~~ev~d~~f~~ 224 (381)
T 1n4k_A 151 TLRGGDSLVPRNSYVRLRHLCTNTWVHSTNIP-----IDKE-EEKPVMLKIGTSPLKEDKEAFAIVPVSPAEVRDLDFAN 224 (381)
T ss_dssp -------------CBEEEEGGGTEEEEEEEEE-----SCCS-SSSCCEEEEEEESSCCSSCCEEEEECCHHHHHHHHHHH
T ss_pred cccccccccccCceEEEEEcccCceEEeeccc-----cCcc-cccceeeeeeeccceeeccceEEEEcCHHHHHHHHHHH
Confidence 888776 55599999999999999754 2444 4578877654 46889999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccccHHHHHHHHHHHHhHccCCCcchhhHHHhhhhccchhhhhhhhhhhhHHHH
Q psy13309 299 KCSSLFTQFISGLEALQVNRRHSLFCASVNLNEMVMCLEDLINYFAQPEEDMEHEEKQNRLRALRNRQDLFQEEGILNLI 378 (1568)
Q Consensus 299 s~~~~l~~Fi~~L~~~~~~~~~~~~~~~~~l~~v~~~L~dLI~F~~~~~~~~~he~kq~~l~p~r~RQkLlREqgvI~ll 378 (1568)
+|+++|++|+++|+.+... ....+.++++|+|||.||.++.++..+...+..++|+|+|||||||||||++|
T Consensus 225 ~~~~~l~~f~~~l~~~~i~--------~~~~~~v~~~L~dLi~F~~~~~~~~~~~l~~~~g~p~r~RQkLlrEq~il~ll 296 (381)
T 1n4k_A 225 DASKVLGSIAGKLEKGTIT--------QNERRSVTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQI 296 (381)
T ss_dssp HHHHHHHHHHHHHHTSCCC--------HHHHHHHHHHHHHHHHHHTTTSCCSSCSGGGGGCCCCHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHhhccccc--------HHHHHHHHHHHHHHHHHhcCcchhcccchhhhcCCccHHHHHHHHhhChHHHH
Confidence 9999999999998742110 11246799999999999998654322233466779999999999999999999
Q ss_pred HHHHhhcccc---cCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcccccccCCCH
Q psy13309 379 LEAIDKINVI---TSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQASSEGTGM 455 (1568)
Q Consensus 379 l~iLd~l~~~---~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~q~~iG~gi 455 (1568)
++||++++.. .+...+.+ .+++..+.|+.|++++|+||+++|+.|+.|++|. ++ |++++.+++ |+++
T Consensus 297 ~~iL~~~f~~~~~~~~~~~~~-l~~~~~~~~~~i~~l~Y~LL~~~~~~~r~Nq~y~-ak-~~~~~q~qi-------g~~~ 366 (381)
T 1n4k_A 297 FKLLQAPFTDCGDGPMLRLEE-LGDQRHAPFRHICRLCYRVLRHSQQDYRKNQEYI-AK-QFGFMQKQI-------GYDV 366 (381)
T ss_dssp HHHHHGGGC------------------CHHHHHHHHHHHHHHHHHHTTCHHHHHHH-HH-HHHHHHHHH-------CTTH
T ss_pred HHHHHhhccccCccchhhHHH-hcchhhhHHHHHHHHHHHHHHHHHHHhHHHHHHH-HH-HHHHHHHHh-------Cccc
Confidence 9999988532 22223332 3455677899999999999999999999999743 33 566555554 5554
Q ss_pred --HHHHHHHHhCCHH
Q psy13309 456 --LDVLHCVLIDSPE 468 (1568)
Q Consensus 456 --ldvL~~lL~nN~e 468 (1568)
.|+|++||+||++
T Consensus 367 ~a~d~i~~ll~nN~k 381 (381)
T 1n4k_A 367 LAEDTITALLHNNRK 381 (381)
T ss_dssp HHHHHHHHHHTTC--
T ss_pred cHHHHHHHHHhcCCC
Confidence 4999999999984
No 7
>3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=3.7e-30 Score=251.70 Aligned_cols=94 Identities=36% Similarity=0.726 Sum_probs=90.8
Q ss_pred CCCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHH
Q psy13309 885 PNGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASE 964 (1568)
Q Consensus 885 ~~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e 964 (1568)
-.+|+|+|||+|+|+||++++.++|+||||+|++||++|+++||+||+++|+.+|+|||||||++||+.+|++||+++++
T Consensus 8 ~~~y~P~Pvd~s~v~L~~~le~lvE~LAen~H~~Wa~~r~~~GW~yG~~rD~~~k~HP~Lvpy~~L~e~~K~~dr~~~~e 87 (103)
T 3nrt_A 8 KLDYIPEPMDLSLVDLPESLIQLSERIAENVHEVWAKARIDEGWTYGEKRDDIHKKHPCLVPYDELPEEEKEYDRNTAMN 87 (103)
T ss_dssp --CCCCCCCCCTTCCCCHHHHTTHHHHHHHHHHHHHHHHHHTTCEECSSCBTTTTEETTCSCGGGSCHHHHHHHHHHHHH
T ss_pred ccCCCCCCccccceeCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCchhccccCCCCcccchhhCCHHHHHHhHHHHHH
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccceecC
Q psy13309 965 TVRTLLVYGYNLDP 978 (1568)
Q Consensus 965 ~lk~ll~~Gy~i~~ 978 (1568)
++|+|+++||+|++
T Consensus 88 ~lk~L~~~Gy~I~r 101 (103)
T 3nrt_A 88 TIKMVKKLGFRIEK 101 (103)
T ss_dssp HHHHHHHTTEEEEE
T ss_pred HHHHHHHcCCeeec
Confidence 99999999999975
No 8
>4etv_A Ryanodine receptor 2; phosphorylation, cardiac, metal transport; 1.65A {Mus musculus}
Probab=99.91 E-value=2.9e-25 Score=242.78 Aligned_cols=96 Identities=25% Similarity=0.593 Sum_probs=91.7
Q ss_pred CCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHH
Q psy13309 886 NGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASET 965 (1568)
Q Consensus 886 ~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~ 965 (1568)
..|+|+|||||+|+||++++.++|+||||+|++||++|+++||+||+++|+..|+|||||||+.|||.+|++||.+++|+
T Consensus 3 ~~~~P~Pvdts~v~Lp~~l~~l~eklAe~~He~Wa~~k~~~GW~yG~~~dd~~k~HP~Lvp~~~L~e~eK~~~r~~~~e~ 82 (209)
T 4etv_A 3 ANFNPQPVDTSNITIPEKLEYFINKYAEHSHDKWSMDKLANGWIYGEIYSDSSKIQPLMKPYKLLSEKEKEIYRWPIKES 82 (209)
T ss_dssp --CCCCCCCCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCBCCSSCBTTTTBCTTCSCGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCccccccccCCcccCChhhCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccceecCCCc
Q psy13309 966 VRTLLVYGYNLDPPTG 981 (1568)
Q Consensus 966 lk~ll~~Gy~i~~p~~ 981 (1568)
||+|+++||+|++...
T Consensus 83 lk~llalG~~I~~~~~ 98 (209)
T 4etv_A 83 LKTMLAWGWRIERTRE 98 (209)
T ss_dssp HHHHHHTTCEEEECSS
T ss_pred HHHHHHcCceeeecCC
Confidence 9999999999977543
No 9
>4erv_A Ryanodine receptor 3; metal transport; 1.75A {Homo sapiens}
Probab=99.91 E-value=2.9e-25 Score=242.78 Aligned_cols=96 Identities=27% Similarity=0.615 Sum_probs=91.4
Q ss_pred CCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHH
Q psy13309 886 NGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASET 965 (1568)
Q Consensus 886 ~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~ 965 (1568)
..|+|+|||||+|+||++++.++|+||||+|++||++|+++||+||+++|+..|+|||||||+.||+.+|++||.+++|+
T Consensus 3 ~~~~P~Pvdts~v~lp~~l~~l~eklAe~~He~Wa~~k~~~GW~yG~~~dd~~k~HP~Lvp~~~L~e~eK~~~r~~~~e~ 82 (207)
T 4erv_A 3 ANFDPKPINTMNFSLPEKLEYIVTKYAEHSHDKWACDKSQSGWKYGISLDENVKTHPLIRPFKTLTEKEKEIYRWPARES 82 (207)
T ss_dssp --CCCCCCCCTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCBCCSSCBTTTTBCTTCSCGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCcccccccccCcccCChhhCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccceecCCCc
Q psy13309 966 VRTLLVYGYNLDPPTG 981 (1568)
Q Consensus 966 lk~ll~~Gy~i~~p~~ 981 (1568)
||+|+++||+|++...
T Consensus 83 lk~lla~G~~I~~~~~ 98 (207)
T 4erv_A 83 LKTMLAVGWTVERTKE 98 (207)
T ss_dssp HHHHHHTTCEEEECC-
T ss_pred HHHHHHcCceEeecCC
Confidence 9999999999977553
No 10
>4esu_A Ryanodine receptor 1; phosphorylation, skeletal, metal transport; 1.59A {Oryctolagus cuniculus} PDB: 4ert_A 4ett_A 4etu_A 3rqr_A
Probab=99.90 E-value=1.1e-24 Score=238.52 Aligned_cols=95 Identities=24% Similarity=0.603 Sum_probs=91.7
Q ss_pred CCCccccccCcccccChhhHHHHHHHHHHHhHHHHHHHHHcCcccccccCCCCCCCCCccCCCCCCHHHHHhhhhhhHHH
Q psy13309 886 NGYKPAPLDLSAIALTPKMEELVDQLAENTHNLWAKERIQQGWTYGLNEDPDMARSPHLVPYGKVDDAIKKANRDTASET 965 (1568)
Q Consensus 886 ~~y~P~PvD~s~v~L~~~~~~~~e~LAen~H~~Wa~~ri~~GWtyG~~rd~~~k~hP~Lvpy~~L~e~eK~~dr~~~~e~ 965 (1568)
..|.|+||||++|+||++++.++|+||||+|++||++|+++||+||+++|+..|+|||||||+.|||.+|++||.++.|+
T Consensus 3 ~~f~P~PVdt~~v~lp~~l~~l~eklAe~~He~W~~~k~~~GW~yG~~~dd~~k~HP~L~p~~~L~e~eK~~~r~~~~e~ 82 (210)
T 4esu_A 3 ANFDPRPVETLNVIIPEKLDSFINKFAEYTHEKWAFDKIQNNWMYGENVDEELKTHPMLRPYKTFSEKDKEIYRWPIKES 82 (210)
T ss_dssp -CCCCCCCCCTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCEECSSCBTTTTEETTCSCGGGCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCceeccHHHHHHHHHHHHHhHHHHHHHHHHcCCccCcccccccccCcccCChhhCCHHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccceecCCC
Q psy13309 966 VRTLLVYGYNLDPPT 980 (1568)
Q Consensus 966 lk~ll~~Gy~i~~p~ 980 (1568)
||+|+++||+|++.+
T Consensus 83 lk~llalG~~I~~~~ 97 (210)
T 4esu_A 83 LKAMIAWEWTIEKAR 97 (210)
T ss_dssp HHHHHHTTCEEEECS
T ss_pred HHHHHHccceeeecC
Confidence 999999999997644
No 11
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.90 E-value=7.9e-24 Score=234.26 Aligned_cols=135 Identities=24% Similarity=0.387 Sum_probs=118.3
Q ss_pred ceeEEeeccceeeecceeEEEEEEee---CCceEEeeccCCCCCCCCCCCCCCceeEeCCcc---ccc-cCCCCCCCCCC
Q psy13309 998 SFRTYRAEKNYAVSSGKWYFEFEILT---AGPMRVGWARVDCAPGAQLGSDENSWAFDGFNR---HIK-INLFQQDKKDY 1070 (1568)
Q Consensus 998 ~~R~~R~e~ty~v~~GkwYfEv~v~t---~G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~---h~~-~~~yG~~w~~G 1070 (1568)
..+.+|+ ++++.+|+|||||+|.+ .|.++||||+..+..+..+|+|++||+|+|.++ |++ .++||++|++|
T Consensus 38 ~~~~vra--~~~v~~G~~YfEV~v~~~~~~~~~~iG~a~~~~~~~~~~G~d~~S~gy~~~~G~~~h~~~~~~yg~~~~~G 115 (213)
T 3toj_A 38 GYSMVRA--SHGVRKGAWYFEITVDEMPPDTAARLGWSQPLGNLQAPLGYDKFSYSWRSKKGTKFHQSIGKHYSSGYGQG 115 (213)
T ss_dssp SCEEEEE--SCCBSSEEEEEEEEEEECCTTCEEEEEEECTTSCTTSCTTSSTTEEEEETTTTCEEETTEEECCSCCCCTT
T ss_pred ceeEEEe--CCCccCCeEEEEEEEeecCCCceEEEEeccCCcccccCCCCCCCcEEEECCCCeEEeCCcCcccCCCCCCC
Confidence 4677888 89999999999999998 789999999999999999999999999987776 554 67999999999
Q ss_pred ceEE-------------------EEeCCccccccCCCccccccccCCccceeeeecCCcEEEEEeCCCccccccccccCC
Q psy13309 1071 SISG-------------------FSLNGELLMDALGGETTFADVQGEGFVPACTLGVGQRAKLTFGQDVNQLKYFSMCGL 1131 (1568)
Q Consensus 1071 DVvG-------------------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~~q~~~~NfG~~~~~~ky~~~~~~ 1131 (1568)
|||| |++||+.| |+||+++..+.|||||||..|+.|++|||+ + |+|+ +
T Consensus 116 DvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~l------g~aF~~~~~~~lyPavsl~~~~~v~~NFG~-~--F~~~----p 182 (213)
T 3toj_A 116 DVLGFYINLPEDTISGRGSSEIIFYKNGVNQ------GVAYKDIFEGVYFPAISLYKSCTVSINFGP-C--FKYP----P 182 (213)
T ss_dssp CEEEEEEEECCC-----CCCEEEEEETTEEE------EEEEESCCSSCBEEEEEEESSCEEEEECSS-S--CSSC----C
T ss_pred CEEEEEEEcCCCccccCCccEEEEEeCCeee------eeeEEcCCCCcEEEEEEcCCCCEEEEECCC-C--CccC----C
Confidence 9999 66677666 799999987789999999999999999999 5 9995 3
Q ss_pred CC-Ccccccccccccch
Q psy13309 1132 QE-GYEPFCVNMKRAVT 1147 (1568)
Q Consensus 1132 qe-g~~p~~~~~~~~~~ 1147 (1568)
++ ||+|++..+...+.
T Consensus 183 ~~~~~~~~~~~~~~~~~ 199 (213)
T 3toj_A 183 KDLTYRPMSDMGWGAVV 199 (213)
T ss_dssp SSCCCEEGGGGGEEEEC
T ss_pred CCCceEcHHHhcccccc
Confidence 44 79999988876654
No 12
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=99.89 E-value=3.3e-24 Score=229.09 Aligned_cols=88 Identities=72% Similarity=1.154 Sum_probs=79.3
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccCCCCceEEEeeec
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTKENDLSVVNASFH 79 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~~~~EVnaS~~ 79 (1568)
||+|++++ |+.|+++++|+|++++++|+|||+|+|+||+|+|||+|++||+|||+++++++|||+|...+++|||+||+
T Consensus 129 yLtv~~~~~sek~~lrv~LgL~d~~~se~swF~I~P~yK~RseGd~V~~GD~ViL~sv~s~~yLH~S~~~g~~eVn~s~~ 208 (217)
T 3im6_A 129 YLCCLSTSRSSTDKLAFDVGLQEDTTGEACWWTIHPASKQRSEGEKVRVGDDLILVSMSSERYLHLSYGNSSWHVDAAFQ 208 (217)
T ss_dssp EEEECSCC------CCEEEEEESCCSSSTTEEEEEESSSCCCTTCBCBTTCEEEEEETTTCCEEEEEECSSSEEEEEESS
T ss_pred EEEEcCCCcccccCcEEEEEeccCCCCcceEEEEEccEeeccCCCceeeCCEEEEEECCCCceEEeecCCCceEEeeecC
Confidence 89999998 77777777778887799999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEe
Q psy13309 80 VTHWSVQPY 88 (1568)
Q Consensus 80 ~T~WkI~lf 88 (1568)
+|.|+|.|+
T Consensus 209 ~T~W~i~p~ 217 (217)
T 3im6_A 209 QTLWSVAPI 217 (217)
T ss_dssp CCCEEEEEC
T ss_pred CceeEEeeC
Confidence 999999985
No 13
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.88 E-value=9.5e-23 Score=218.34 Aligned_cols=118 Identities=22% Similarity=0.296 Sum_probs=104.7
Q ss_pred ceeEEeeccceeeecceeEEEEEEeeC---CceEEeeccCCCCCCCCCCCCCCceeEeCCcc---cc--ccCCCCCCCCC
Q psy13309 998 SFRTYRAEKNYAVSSGKWYFEFEILTA---GPMRVGWARVDCAPGAQLGSDENSWAFDGFNR---HI--KINLFQQDKKD 1069 (1568)
Q Consensus 998 ~~R~~R~e~ty~v~~GkwYfEv~v~t~---G~mrvGWa~~~~~~~~~vG~D~~Sy~fdG~~~---h~--~~~~yG~~w~~ 1069 (1568)
..+.+|+ ++++.+|+|||||+|.+. |.|+||||+..+..+..+|+|++||||+|+++ |+ ..++||++|++
T Consensus 26 ~~~~vra--~~p~~~g~~YfEv~i~~~~~~~~~~IG~a~~~~~~~~~~G~d~~S~gy~~~dG~~~~~~~~~~~yg~~f~~ 103 (171)
T 2yyo_A 26 EVGCYVA--SRPLTKDSNYFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKCNS 103 (171)
T ss_dssp CCEEEEC--SSCCCSSSCEEEEEEEEETTTCCCEEEEECTTCCTTSCTTSSTTCEEEETTTCCEESSSSCCBCCSCCCCT
T ss_pred ceeEEEE--CCCCCCCCEEEEEEEEECCCCcEEEEEecCCCCCCccCCCccCCEEEEEcCCCeEEeCCCCCCcCCCCCCC
Confidence 5677887 899999999999999986 89999999999999999999999999999877 43 36899999999
Q ss_pred CceEE----------------EEeCCccccccCCCccccccccCCccceeeeecC-CcEEEEEeCCCccccccc
Q psy13309 1070 YSISG----------------FSLNGELLMDALGGETTFADVQGEGFVPACTLGV-GQRAKLTFGQDVNQLKYF 1126 (1568)
Q Consensus 1070 GDVvG----------------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~-~q~~~~NfG~~~~~~ky~ 1126 (1568)
||||| ||+||+.| |+||.++....|||||||.. |++|++|||+. |+|+
T Consensus 104 GDvIGc~id~~~~~~~~~~i~Ft~NG~~l------g~af~~~~~~~lyPaV~l~~~g~~v~vNFG~~---~~~p 168 (171)
T 2yyo_A 104 GDRIGCGIEPVSFDVQTAQIFFTKNGKRV------GSTIMPMSPDGLFPAVGMHSLGEEVRLHLNAE---LSGP 168 (171)
T ss_dssp TCEEEEEECGGGGSSSCEEEEEEETTEEE------EEEEESSCSSSCEEEEEECSTTEEEEEETTCC---C---
T ss_pred CCEEEEEEEeccCCCCcEEEEEEECCEEc------CceecCCcCCCEEEEEEEecCCCEEEEECCCC---CcCC
Confidence 99999 88999998 79999998779999999987 99999999994 6664
No 14
>3nrt_A Putative ryanodine receptor; PSI-2, protein structure initiative, structural genomics, MI center for structural genomics (MCSG); 2.54A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=6.9e-23 Score=200.48 Aligned_cols=94 Identities=31% Similarity=0.750 Sum_probs=85.4
Q ss_pred CCcccccccccccccchhhhHHHHHHHHHHHHHHHHhHhHhcccccccccCccccCCcchhhhhhhHHHhhhhhhhhccc
Q psy13309 753 TAFVPTPVDTSMITLPHYVENIRDKLAENIHEMWAMNKIEAGWMYGERRDDVRKIHPCLIQFERRIWRLCSRISRLCSRI 832 (1568)
Q Consensus 753 ~~f~P~PVdTs~v~Lp~~l~~~~eklAen~He~Wa~~ki~~GW~yG~~rdd~~k~HPcLvp~e~Lpe~l~~~~~~~~~~~ 832 (1568)
..|.|.||||++|.||+.++.++|+||||.|++|++.|+.+||+||+++|+..|+||||+||++||+ .++++
T Consensus 9 ~~y~P~Pvd~s~v~L~~~le~lvE~LAen~H~~Wa~~r~~~GW~yG~~rD~~~k~HP~Lvpy~~L~e----~~K~~---- 80 (103)
T 3nrt_A 9 LDYIPEPMDLSLVDLPESLIQLSERIAENVHEVWAKARIDEGWTYGEKRDDIHKKHPCLVPYDELPE----EEKEY---- 80 (103)
T ss_dssp -CCCCCCCCCTTCCCCHHHHTTHHHHHHHHHHHHHHHHHHTTCEECSSCBTTTTEETTCSCGGGSCH----HHHHH----
T ss_pred cCCCCCCccccceeCCHHHHHHHHHHHHHHHHHHHHHHHHhccccCchhccccCCCCcccchhhCCH----HHHHH----
Confidence 4799999999999999999999999999999999999999999999999999999999999999998 44433
Q ss_pred cccccccccCCcchhhhhhhhhHHHhccceeecC
Q psy13309 833 RSETSILFYHPPRVKFHAKVLPTILAIGYHISMD 866 (1568)
Q Consensus 833 ~~e~~~~~Y~~~~~~~~~e~LktllalG~~i~~~ 866 (1568)
++.++.+++++|+++||+|+..
T Consensus 81 ------------dr~~~~e~lk~L~~~Gy~I~r~ 102 (103)
T 3nrt_A 81 ------------DRNTAMNTIKMVKKLGFRIEKE 102 (103)
T ss_dssp ------------HHHHHHHHHHHHHHTTEEEEEC
T ss_pred ------------hHHHHHHHHHHHHHcCCeeecC
Confidence 4556788899999999999754
No 15
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=99.83 E-value=2.4e-21 Score=217.61 Aligned_cols=87 Identities=28% Similarity=0.457 Sum_probs=83.5
Q ss_pred CccccCcC-cccccccceEEEeeCCCCceeEEEEEcccccccCCCceecCCEEEEEEccCCCcccccC-----CCCceEE
Q psy13309 1 YLACLSTS-SSNDKLSFDVGLQEHSQGEACWWTVHPASKQRSEGEKVRVGDDLILVSVATERYLHTTK-----ENDLSVV 74 (1568)
Q Consensus 1 YL~cl~~s-S~~eK~af~V~L~e~~~~E~cwF~I~P~~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~-----~~~~~EV 74 (1568)
||+|++++ |+.||+||+|+|++ +++|+|||+|+|+||+|+|||+|++||+|+|+|+++++|||+|. ..+++||
T Consensus 146 yLt~~~~~~a~~ek~a~~v~L~~-~~se~s~F~I~P~~k~r~eGd~V~~gD~V~l~~~~~~~~Lh~S~~~l~d~~~~~eV 224 (246)
T 1xzz_A 146 YLTVNKRLPALLEKNAMRVTLDE-AGNEGSWFYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEV 224 (246)
T ss_dssp EEEEEEEEECSSSTTSEEEEEES-SCCGGGCEEEEESSTTSCTTSBCBTTCEEEEEESSSCSCEEEEEEECSSSSSCEEE
T ss_pred EEEEcCcCchhhcccceEEEEec-CCCCceEEEEeeceeecccCCceEECCEEEEEECCCCCcccccccccCCCCCCcEE
Confidence 89999998 99999999999975 99999999999999999999999999999999999999999994 3689999
Q ss_pred EeeeceeeEEEEEe
Q psy13309 75 NASFHVTHWSVQPY 88 (1568)
Q Consensus 75 naS~~~T~WkI~lf 88 (1568)
|+++++|.|+|+||
T Consensus 225 n~~~~~T~Wki~l~ 238 (246)
T 1xzz_A 225 NSVNCNTSWKIVLF 238 (246)
T ss_dssp EESSCCCEEEEEEE
T ss_pred EeecCCceeEEeeh
Confidence 99999999999999
No 16
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.71 E-value=1.4e-17 Score=184.25 Aligned_cols=143 Identities=21% Similarity=0.303 Sum_probs=108.0
Q ss_pred eeecceeecccccccccCCceeEeecCCCccccccceecccccccccCCCCccccccccccCCccccccCC--ccccCCc
Q psy13309 554 DVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGGGEKWGGNGVGDDLYSFGFDGA--HLWTGGR 631 (1568)
Q Consensus 554 ~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~g~~~gg~gvGdd~~S~gfDG~--~~w~~~~ 631 (1568)
.|||+.++..| .+|||+++.... ..+.+.. ||+.....- ...+|.|.+||||++. ++||++.
T Consensus 41 ~vra~~~v~~G-------~~YfEV~v~~~~---~~~~~~i--G~a~~~~~~----~~~~G~d~~S~gy~~~~G~~~h~~~ 104 (213)
T 3toj_A 41 MVRASHGVRKG-------AWYFEITVDEMP---PDTAARL--GWSQPLGNL----QAPLGYDKFSYSWRSKKGTKFHQSI 104 (213)
T ss_dssp EEEESCCBSSE-------EEEEEEEEEECC---TTCEEEE--EEECTTSCT----TSCTTSSTTEEEEETTTTCEEETTE
T ss_pred EEEeCCCccCC-------eEEEEEEEeecC---CCceEEE--EeccCCccc----ccCCCCCCCcEEEECCCCeEEeCCc
Confidence 56777666655 466666662110 0122222 566543211 2369999999999754 7888764
Q ss_pred cccccCCCCCCCcccCCEEEEeeeCCC--------CeEEEeeCCcccccccccccCCCcceeeeeccCCcceEEeecCCc
Q psy13309 632 RTEVIPGTLEPYIKKGDVIGVALDLSI--------PIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSKLSCRFLFGGDH 703 (1568)
Q Consensus 632 ~~~~~~~~~~~~~~~GDviGc~lDl~~--------g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~~~~~fnfGg~~ 703 (1568)
. ..|++.|+.||||||+||++. ++|+|++||+.+|.||.++. .|.+|||||+..++++++|||.
T Consensus 105 ~-----~~yg~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF~~~~-~~~lyPavsl~~~~~v~~NFG~-- 176 (213)
T 3toj_A 105 G-----KHYSSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAYKDIF-EGVYFPAISLYKSCTVSINFGP-- 176 (213)
T ss_dssp E-----ECCSCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEEESCC-SSCBEEEEEEESSCEEEEECSS--
T ss_pred C-----cccCCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeEEcCC-CCcEEEEEEcCCCCEEEEECCC--
Confidence 3 278999999999999999998 79999999999999999753 4789999999999999999995
Q ss_pred CCcccCCCC-CChhhhhcc
Q psy13309 704 GRLKYIPPE-EFSPLVESL 721 (1568)
Q Consensus 704 ~~fk~~Pp~-g~~p~~~a~ 721 (1568)
+|+|+||+ ||+|+.+..
T Consensus 177 -~F~~~p~~~~~~~~~~~~ 194 (213)
T 3toj_A 177 -CFKYPPKDLTYRPMSDMG 194 (213)
T ss_dssp -SCSSCCSSCCCEEGGGGG
T ss_pred -CCccCCCCCceEcHHHhc
Confidence 79998887 899987743
No 17
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.63 E-value=5.4e-16 Score=166.04 Aligned_cols=144 Identities=18% Similarity=0.189 Sum_probs=101.2
Q ss_pred hhCCCCccceeecceeecccccccccCCceeEeecCCCccccccceecccccccccCCCCccccccccccCCccccccCC
Q psy13309 545 KHGRDPKVLDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGGGEKWGGNGVGDDLYSFGFDGA 624 (1568)
Q Consensus 545 k~gr~p~vl~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~g~~~gg~gvGdd~~S~gfDG~ 624 (1568)
.||...+.-.|||+.++-.| .+|||+++-... ..+.+.. ||++....- ...+|.|.+||||+|.
T Consensus 20 ~~~~~~~~~~vra~~p~~~g-------~~YfEv~i~~~~---~~~~~~I--G~a~~~~~~----~~~~G~d~~S~gy~~~ 83 (171)
T 2yyo_A 20 YHGNSGEVGCYVASRPLTKD-------SNYFEVSIVDSG---VRGTIAV--GLVPQYYSL----DHQPGWLPDSVAYHAD 83 (171)
T ss_dssp ECCCSSCCEEEECSSCCCSS-------SCEEEEEEEEET---TTCCCEE--EEECTTCCT----TSCTTSSTTCEEEETT
T ss_pred EeCCCCceeEEEECCCCCCC-------CEEEEEEEEECC---CCcEEEE--EecCCCCCC----ccCCCccCCEEEEEcC
Confidence 45543355667888777665 466666661100 0122222 677643322 1358999999999985
Q ss_pred --ccccCCccccccCCCCCCCcccCCEEEEeeeCC-----CCeEEEeeCCcccccccccccCCCcceeeeeccC-CcceE
Q psy13309 625 --HLWTGGRRTEVIPGTLEPYIKKGDVIGVALDLS-----IPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSS-KLSCR 696 (1568)
Q Consensus 625 --~~w~~~~~~~~~~~~~~~~~~~GDviGc~lDl~-----~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~-~~~~~ 696 (1568)
++|++.... ..|++.|+.||||||+||++ .++|.|++||+.+|.||..+. .+.+|||||+.. +++++
T Consensus 84 dG~~~~~~~~~----~~yg~~f~~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~~~-~~~lyPaV~l~~~g~~v~ 158 (171)
T 2yyo_A 84 DGKLYNGRAKG----RQFGSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMS-PDGLFPAVGMHSLGEEVR 158 (171)
T ss_dssp TCCEESSSSCC----BCCSCCCCTTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEESSC-SSSCEEEEEECSTTEEEE
T ss_pred CCeEEeCCCCC----CcCCCCCCCCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecCCc-CCCEEEEEEEecCCCEEE
Confidence 788864322 37899999999999999998 499999999999999999764 379999999988 79999
Q ss_pred EeecCCcCCcccCCCCC
Q psy13309 697 FLFGGDHGRLKYIPPEE 713 (1568)
Q Consensus 697 fnfGg~~~~fk~~Pp~g 713 (1568)
+|||. +|++| |+|
T Consensus 159 vNFG~---~~~~p-p~~ 171 (171)
T 2yyo_A 159 LHLNA---ELSGP-SSG 171 (171)
T ss_dssp EETTC---CC-------
T ss_pred EECCC---CCcCC-CCC
Confidence 99996 68774 444
No 18
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=99.54 E-value=4.4e-14 Score=153.22 Aligned_cols=130 Identities=19% Similarity=0.180 Sum_probs=97.4
Q ss_pred cCCCceecCCEEEEEEccCCCccccc-----CCCCceEEEee----eceeeEEEEEeecccccccccccccccccCCCCC
Q psy13309 41 SEGEKVRVGDDLILVSVATERYLHTT-----KENDLSVVNAS----FHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTE 111 (1568)
Q Consensus 41 seGe~VrvgD~ViLvsv~s~~yLH~S-----~~~~~~EVnaS----~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr 111 (1568)
|+|+.|.+||.|+|.+++|+.|||.. ..++.-||.+. ..++.|.|.++... ... .|..|+
T Consensus 2 s~~~~V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~------~~~-----~~~~v~ 70 (187)
T 1t9f_A 2 SDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNA------KCN-----RGDAIK 70 (187)
T ss_dssp CTTCBCBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTC------CCC-----TTCBCC
T ss_pred CCCCEEEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCC------ccC-----CCCEec
Confidence 78999999999999999999999953 23567789985 44789999998432 111 133555
Q ss_pred CCcEEEEccCCCCccC----c----cccceeEEEEecCccccCCcceEEEeecccccCCccceecCceEEEEcCCCceee
Q psy13309 112 VTNVSLYLHPGLICPD----R----SKYLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLS 183 (1568)
Q Consensus 112 ~GDVVRLfH~E~~~~~----~----~~~~~~v~~~e~g~~~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLa 183 (1568)
.||+|||+|.+..... + +..++.|.-| ++....+++.+|+||.+ |+.++|++.|||||+.||.||+
T Consensus 71 ~Gd~IRL~H~~T~~~Lhsh~~~~p~s~~~~EVs~~-g~~~~gd~~d~W~vei~-----~~~~~~~~~fRL~H~~tg~yL~ 144 (187)
T 1t9f_A 71 CGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAF-GSEAESDTGDDWTVICN-----GDEWLESEQFKLRHAVTGSYLS 144 (187)
T ss_dssp TTCEEEEEETTTCCEEEEEEEECSSCTTSEEEEEE-CCTTTCCGGGCEEEECS-----SSSCBTTSEEEEEETTTCCEEE
T ss_pred cCCEEEEEECCCCCCEeECCcCCCCCCCceEEEEe-cccCCCCCCCeEEEEEc-----CCEEecCCeEEEEECCcCeEEe
Confidence 5999999999965211 1 2224455555 33345688999999986 5567899999999999999999
Q ss_pred eeec
Q psy13309 184 TNEN 187 (1568)
Q Consensus 184 v~~d 187 (1568)
+...
T Consensus 145 ~~~~ 148 (187)
T 1t9f_A 145 LSGQ 148 (187)
T ss_dssp EEEE
T ss_pred cCCc
Confidence 9864
No 19
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=99.38 E-value=1.7e-12 Score=143.39 Aligned_cols=110 Identities=15% Similarity=0.211 Sum_probs=90.2
Q ss_pred eeEEeeccceeeecceeEEEEEEee---CCceEEeeccCCCCC-----CCCCCCCCCceeEeCCcc---ccccC----C-
Q psy13309 999 FRTYRAEKNYAVSSGKWYFEFEILT---AGPMRVGWARVDCAP-----GAQLGSDENSWAFDGFNR---HIKIN----L- 1062 (1568)
Q Consensus 999 ~R~~R~e~ty~v~~GkwYfEv~v~t---~G~mrvGWa~~~~~~-----~~~vG~D~~Sy~fdG~~~---h~~~~----~- 1062 (1568)
...++. +.++++|+|||||+|.+ .+.++||||+..+.. ...+|.|+.||+|++.++ |++.. .
T Consensus 63 ~~~Vlg--~~~f~sGrhYWEV~v~~~~~~~~w~vGV~~~~~~r~~~g~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~ 140 (212)
T 2jk9_A 63 TDAIRG--KVGYTRGLHVWQITWAMRQRGTHAVVGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTY 140 (212)
T ss_dssp EEEEEE--SCCBCSSEEEEEEECCGGGCTTCCEEEEECTTSCCEEESSCCCTTSSTTEEEEETTTTEEEESTTTSCCEES
T ss_pred cceEEc--CCCccCCeEEEEEEEecccCCCcEEEEEEcCCccccccCcccccccCCCcEeeECCCCcEEECCcccCcccc
Confidence 455566 77889999999999985 578999999998874 456899999999998665 44311 1
Q ss_pred -----CCCCCCCCceEE-----------EEeCCccccccCCCccccccccCCccceeeeec-CCcEEEEEe
Q psy13309 1063 -----FQQDKKDYSISG-----------FSLNGELLMDALGGETTFADVQGEGFVPACTLG-VGQRAKLTF 1116 (1568)
Q Consensus 1063 -----yG~~w~~GDVvG-----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~-~~q~~~~Nf 1116 (1568)
||+.|++||+|| |++||+.+ +.||+++.+..+|||+|+. .+..|++||
T Consensus 141 ~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l------~~aF~~~~~~~l~P~f~l~~g~~~v~l~~ 205 (212)
T 2jk9_A 141 PAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYM------GVAFRGLKGKKLYPVVSAVWGHCEIRMRY 205 (212)
T ss_dssp STTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEE------EEEECCCTTCCBEEEEEECCTTCEEEEEE
T ss_pred CcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEe------EEEeccCCCCEEeeEEEEEcCCcEEEEEE
Confidence 578899999999 88999887 5899998888999999995 455788888
No 20
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=99.35 E-value=3.1e-12 Score=141.95 Aligned_cols=110 Identities=19% Similarity=0.228 Sum_probs=90.3
Q ss_pred eeEEeeccceeeecceeEEEEEEeeC---CceEEeeccCCCC-----CCCCCCCCCCceeEeCCcc---cccc----CCC
Q psy13309 999 FRTYRAEKNYAVSSGKWYFEFEILTA---GPMRVGWARVDCA-----PGAQLGSDENSWAFDGFNR---HIKI----NLF 1063 (1568)
Q Consensus 999 ~R~~R~e~ty~v~~GkwYfEv~v~t~---G~mrvGWa~~~~~-----~~~~vG~D~~Sy~fdG~~~---h~~~----~~y 1063 (1568)
+..+++ +.++++|+|||||+|.+. +.++||||+..+. .+..+|.|+.||+|++.++ |++. ..|
T Consensus 73 ~~~Vl~--~~~~~sGrhYWEV~v~~~~~g~~~~vGv~~~~~~r~~~g~~~~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~ 150 (217)
T 3emw_A 73 TDGARG--KRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQTDHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQY 150 (217)
T ss_dssp EEEEEE--SCCBSSSEEEEEEECCGGGCTTCCEEEEECTTSCCEESSSCCCTTSSTTEEEEETTTCBEESSCCSSCCCBS
T ss_pred CCEEEe--CCCccCccEEEEEEEcccCCCCceeEEEEcCccccccCCccccccCCCCEEEEEeCCCcEEeCCcccCCccc
Confidence 445566 677889999999999874 5899999999886 4567999999999997655 5432 357
Q ss_pred C-----CCCCCCceEE-----------EEeCCccccccCCCccccccccCCccceeeee-cCCcEEEEEe
Q psy13309 1064 Q-----QDKKDYSISG-----------FSLNGELLMDALGGETTFADVQGEGFVPACTL-GVGQRAKLTF 1116 (1568)
Q Consensus 1064 G-----~~w~~GDVvG-----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL-~~~q~~~~Nf 1116 (1568)
+ ..|..||+|| |++||+.+ +.||+++.++.+|||+|+ ..+..|+++|
T Consensus 151 ~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~l------g~aF~~~~~~~LyP~~sl~~g~~~v~l~~ 214 (217)
T 3emw_A 151 PAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYL------GPAFRGLKGRTLYPAVSAVWGQCQVRIRY 214 (217)
T ss_dssp SSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEE------EEEECCCTTCCBEEEEEECSTTCEEEEEE
T ss_pred cccccccCCCCCCEEEEEEEcCCCEEEEEECCeEe------EEEEECCCCCEEEEEEEeccCCcEEEEEe
Confidence 6 5699999999 99999988 689999988889999998 4667788776
No 21
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=99.14 E-value=3.6e-11 Score=134.22 Aligned_cols=108 Identities=19% Similarity=0.237 Sum_probs=85.0
Q ss_pred EEeeccceeeecceeEEEEEEee---CCceEEeeccCCCC-----CCCCCCCCCCceeEeCCcc---cccc----CCC--
Q psy13309 1001 TYRAEKNYAVSSGKWYFEFEILT---AGPMRVGWARVDCA-----PGAQLGSDENSWAFDGFNR---HIKI----NLF-- 1063 (1568)
Q Consensus 1001 ~~R~e~ty~v~~GkwYfEv~v~t---~G~mrvGWa~~~~~-----~~~~vG~D~~Sy~fdG~~~---h~~~----~~y-- 1063 (1568)
.++. +.++++|+|||||+|.+ .+.++||||+..+. ....+|.|..||+|+..++ |++. ..|
T Consensus 72 ~Vlg--~~~f~sGrhYWEV~V~~~~~~~~w~vGV~~~s~~~~r~~~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~ 149 (226)
T 2afj_A 72 GVRG--KRGYSRGLHAWEISWPLEQRGTHAVVGVATALAPLQADHYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPA 149 (226)
T ss_dssp SEEE--CCCCCCSEEEEEEECCCCSSSCCCEEEEEESSCCCSSCSSSCCCCCSCEEEEEEGGGTSTTSSSSCCSCSSSSC
T ss_pred eEEE--CCCccCCEEEEEEEEeccCCCCCEEEEecCCccccccccccccccCCCCcEEEEcCCCeEEECccccCcccccc
Confidence 3455 67788999999999987 67899999999884 3456899999999987554 4432 235
Q ss_pred ---CCCCCCCceEE-----------EEeCCccccccCCCccccccccCCccceeeeecC-CcEEEEEe
Q psy13309 1064 ---QQDKKDYSISG-----------FSLNGELLMDALGGETTFADVQGEGFVPACTLGV-GQRAKLTF 1116 (1568)
Q Consensus 1064 ---G~~w~~GDVvG-----------F~lNG~~l~~~~g~g~AF~di~~~~~~Pa~SL~~-~q~~~~Nf 1116 (1568)
+..|++||+|| |+.||+.+ +.||+++.++.+||++++.. +..|.+||
T Consensus 150 ~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l------~~aF~~~~~~~L~P~f~l~~g~~~v~l~~ 211 (226)
T 2afj_A 150 GPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYL------GPAFRGLKGRTLYPSVSAVWGQCQVRIRY 211 (226)
T ss_dssp CSGGGGSCCSSCEEEEEETTTTEEEEESTTCSC------STTHHHHHHHCCEEEEEECCTTSCCEEEE
T ss_pred cccCCcCCCCCEEEEEEECCCCEEEEEECCeEe------EEEEEcCCCCEEEEEEEcccCCCEEEEEE
Confidence 34689999999 88888876 58999987778999999964 44677777
No 22
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=98.93 E-value=4.3e-09 Score=115.13 Aligned_cols=133 Identities=17% Similarity=0.225 Sum_probs=92.8
Q ss_pred ccCCCceecCCEEEEEEccCCCcccccC-----CCCceEEEeee----ceeeEEEEEeecccccccccccccccccCCCC
Q psy13309 40 RSEGEKVRVGDDLILVSVATERYLHTTK-----ENDLSVVNASF----HVTHWSVQPYGTGISRMKYVMCLEVMSCGSST 110 (1568)
Q Consensus 40 RseGe~VrvgD~ViLvsv~s~~yLH~S~-----~~~~~EVnaS~----~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~l 110 (1568)
..+|+.|.+||.|.|.++.|+.|||... .++.-||.+-. .+..|.|.++.. ... -.|..|
T Consensus 12 ~~~~~~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~------~~~-----~~~~~v 80 (199)
T 3mal_A 12 GKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPG------TTE-----KQGDAV 80 (199)
T ss_dssp ----CBCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTT------SSC-----CTTSBC
T ss_pred CCCCCEEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCc------CCc-----CCCcEe
Confidence 4579999999999999999999999432 24577888732 357899987722 111 124456
Q ss_pred CCCcEEEEccCCCCccCccc-------cceeEEEEecCccccCCcceEEEeecccccCCccceecCceEEEEcCCCceee
Q psy13309 111 EVTNVSLYLHPGLICPDRSK-------YLFHIVVYEGGSVMSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLS 183 (1568)
Q Consensus 111 r~GDVVRLfH~E~~~~~~~~-------~~~~v~~~e~g~~~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLa 183 (1568)
+.||+|||.|....+...+. .++.|.-|... ....++.+|+||.++ .|....++..|||||+.||.||.
T Consensus 81 ~~gd~IRL~H~~T~~~LhSH~~~~P~s~~~EVs~~~~~-~~~D~~d~W~Vei~~---~~~~~~~~~~fRL~H~~T~~yL~ 156 (199)
T 3mal_A 81 KSGATIRLQHMKTRKWLHSHLHASPISGNLEVSCFGDD-TNSDTGDHWKLIIEG---SGKTWKQDQRVRLQHIDTSGYLH 156 (199)
T ss_dssp BTTCEEEEEETTTCCEEEEEEEECTTTCSEEEEEECBT-TBCCGGGCEEEEESS---SCCBCBTTCEEEEEETTTCCEEE
T ss_pred ecCCEEEEEECCCCCCEeECCcCCCCCCCeEEEEeccC-CCCCCCCeEEEEEcC---CCCEEEcCCeEEEEECCCCeEEe
Confidence 66999999999876433211 13334434321 135789999999975 36678889999999999999999
Q ss_pred eeec
Q psy13309 184 TNEN 187 (1568)
Q Consensus 184 v~~d 187 (1568)
....
T Consensus 157 sh~~ 160 (199)
T 3mal_A 157 SHDK 160 (199)
T ss_dssp EEEE
T ss_pred eCCC
Confidence 8653
No 23
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=98.76 E-value=1.9e-08 Score=111.07 Aligned_cols=134 Identities=18% Similarity=0.190 Sum_probs=88.0
Q ss_pred ceeecceeecccccccccCCceeEeecCCCccccccceecccccccccCCCCccc-cccccccCCccccccCC--ccccC
Q psy13309 553 LDVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGGGEKW-GGNGVGDDLYSFGFDGA--HLWTG 629 (1568)
Q Consensus 553 l~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~g~~~-gg~gvGdd~~S~gfDG~--~~w~~ 629 (1568)
..|||+..+..| ..|||+++.++. ..|.+. -|++.......+. ....+|.+..||+|++. .+|++
T Consensus 64 ~~Vlg~~~f~sG-------rhYWEV~v~~~~--~~~~w~---vGV~~~~~~r~~~g~~~~~G~~~~sw~~~~~~~~~~h~ 131 (212)
T 2jk9_A 64 DAIRGKVGYTRG-------LHVWQITWAMRQ--RGTHAV---VGVATADAPLHSVGYTTLVGNNHESWGWDLGRNRLYHD 131 (212)
T ss_dssp EEEEESCCBCSS-------EEEEEEECCGGG--CTTCCE---EEEECTTSCCEEESSCCCTTSSTTEEEEETTTTEEEES
T ss_pred ceEEcCCCccCC-------eEEEEEEEeccc--CCCcEE---EEEEcCCccccccCcccccccCCCcEeeECCCCcEEEC
Confidence 356676666666 578888883210 011111 1444321110001 12357999999999874 67876
Q ss_pred Ccccc---cc-CCCCCCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccC-CcceEEee
Q psy13309 630 GRRTE---VI-PGTLEPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSS-KLSCRFLF 699 (1568)
Q Consensus 630 ~~~~~---~~-~~~~~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~-~~~~~fnf 699 (1568)
+.... .. ...+++.+..||+|||+||.+.|+|+|+.||..++.+|... +.+.+||++|+.. +.+++++|
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~-~~~~l~P~f~l~~g~~~v~l~~ 205 (212)
T 2jk9_A 132 GKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGL-KGKKLYPVVSAVWGHCEIRMRY 205 (212)
T ss_dssp TTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCC-TTCCBEEEEEECCTTCEEEEEE
T ss_pred CcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccC-CCCEEeeEEEEEcCCcEEEEEE
Confidence 65421 10 01256778999999999999999999999999999999865 3459999999864 35677775
No 24
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=98.71 E-value=2.8e-08 Score=110.22 Aligned_cols=129 Identities=14% Similarity=0.186 Sum_probs=84.0
Q ss_pred eeecceeecccccccccCCceeEeecCCCccccccceecccccccccCCC--CccccccccccCCccccccCC--ccccC
Q psy13309 554 DVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPGG--GEKWGGNGVGDDLYSFGFDGA--HLWTG 629 (1568)
Q Consensus 554 ~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~~--g~~~gg~gvGdd~~S~gfDG~--~~w~~ 629 (1568)
.|||+..+..| ..|||+++-+++- -+.+ . -|++..... +.+ ....+|.+..||+|++. .+|++
T Consensus 75 ~Vl~~~~~~sG-------rhYWEV~v~~~~~--g~~~-~--vGv~~~~~~r~~~g-~~~~lG~~~~SW~l~~~~g~~~h~ 141 (217)
T 3emw_A 75 GARGKRGYSRG-------LHAWEISWPLEQR--GTHA-V--VGVATALAPLQTDH-YAALLGSNSESWGWDIGRGKLYHQ 141 (217)
T ss_dssp EEEESCCBSSS-------EEEEEEECCGGGC--TTCC-E--EEEECTTSCCEESS-SCCCTTSSTTEEEEETTTCBEESS
T ss_pred EEEeCCCccCc-------cEEEEEEEcccCC--CCce-e--EEEEcCccccccCC-ccccccCCCCEEEEEeCCCcEEeC
Confidence 57777666666 5788888832200 0111 1 133321110 101 12358999999998753 67887
Q ss_pred CccccccCCCCC-----CCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccCC-cceEEe
Q psy13309 630 GRRTEVIPGTLE-----PYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSSK-LSCRFL 698 (1568)
Q Consensus 630 ~~~~~~~~~~~~-----~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~~-~~~~fn 698 (1568)
+..... ..|+ +.+..+|+|||+||++.|+++|++||..+|.+|.... .+.+||++|+..+ .++++.
T Consensus 142 ~~~~~~--~~~~~~~~~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~~~-~~~LyP~~sl~~g~~~v~l~ 213 (217)
T 3emw_A 142 SKGPGA--PQYPAGTQGEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLK-GRTLYPAVSAVWGQCQVRIR 213 (217)
T ss_dssp CCSSCC--CBSSSSSTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCT-TCCBEEEEEECSTTCEEEEE
T ss_pred CcccCC--ccccccccccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEECCC-CCEEEEEEEeccCCcEEEEE
Confidence 653221 1232 4678999999999999999999999999999999743 4689999998543 555544
No 25
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=98.54 E-value=9.2e-07 Score=111.05 Aligned_cols=185 Identities=16% Similarity=0.191 Sum_probs=118.9
Q ss_pred CCCceecCCEEEEEEccCCCcccccC------CCCceEEEee---eceeeEEEEEeecccccccccccccccccCCCCCC
Q psy13309 42 EGEKVRVGDDLILVSVATERYLHTTK------ENDLSVVNAS---FHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEV 112 (1568)
Q Consensus 42 eGe~VrvgD~ViLvsv~s~~yLH~S~------~~~~~EVnaS---~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~ 112 (1568)
.|..|.+|..|.|..++|+.||++.. +++.+.|... ...|.|+|.|... +.. -|..++.
T Consensus 111 ~g~~V~YGs~IqL~H~~S~kyL~~~~~~~a~~e~~~~~V~L~~~~~e~s~F~I~P~~k------~~~------eGe~V~~ 178 (604)
T 3uj4_A 111 LGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYK------LRS------IGDSVVI 178 (604)
T ss_dssp TTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTCEEEEEESSCCGGGCEEEEESST------TSC------TTSBCBT
T ss_pred cCCeEEeCCeEEEEEcccCcEEEEcCCCcccccCCceEEEEEecCCCCeEEEEecCcc------ccc------CCCeEee
Confidence 46789999999999999999998743 3567777653 3678999999832 221 1345666
Q ss_pred CcEEEEccCCCCccCccccceeEEEEecCcc-----ccCCcceEEEeeccc--ccCCccceecCceEEEEcCCCceeeee
Q psy13309 113 TNVSLYLHPGLICPDRSKYLFHIVVYEGGSV-----MSQARSLWRLELART--KWAGGFINWYHPMRIRHLTTGRYLSTN 185 (1568)
Q Consensus 113 GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~~-----~tsa~sLWeIE~~~~--~~~GG~v~Wgq~fRLRHLtTG~YLav~ 185 (1568)
||.|.|-|...+..-++. ...|.+|+. ....++.|+|++... .-.|+.++-|+.+||+|..||+||..-
T Consensus 179 Gd~V~L~~~~tg~~LHSh----~~~yp~gS~qQqVt~~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H~~T~~~LhSH 254 (604)
T 3uj4_A 179 GDKVVLNPVNAGQPLHAS----SHQLVDNPGANEVNSVNANTSWKIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTAD 254 (604)
T ss_dssp TCEEEEEESSSCSCEEEE----EEECSSSTTCEEEEESSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEcCCCCcEEee----cccCCCCCCceEEEEEcCCCeEEEEecCCCCcccCcccccCCEEEEEECCCCCCeecC
Confidence 899999998754322211 122222221 247889999997544 235788999999999999999999987
Q ss_pred ecCcc-c---cccc----cccCCCCcceEeeccccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEeeec
Q psy13309 186 ENNEL-Y---LVTR----DEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTYKSY 254 (1568)
Q Consensus 186 ~d~~l-~---l~~~----~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~~ 254 (1568)
+...- . .+.. ....+..+.|.....+.+. . ...+..-++-+||+|+.||.+|++...
T Consensus 255 ~~~~P~~~~~eVs~yg~~~~~gd~ndlW~IEi~~~~~-----------~-~G~~~~~~s~fRLrH~~Tg~YL~s~~~ 319 (604)
T 3uj4_A 255 EHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQHDP-----------A-RGGAGYWNSLFRFKHLATGHYLAAEVD 319 (604)
T ss_dssp EETTEEEEEEECCC--CTTCCCCGGGEEEEEECCSST-----------T-CCCBCBTTCEEEEEETTTCCEEEEEEC
T ss_pred CCCCCCcceEEEeecccccCCCCCCCeEEEEEecCCc-----------C-CCCeEEecCeEEEEEcccCceeeeccC
Confidence 64310 0 0000 0112223344443221100 0 011333379999999999999988753
No 26
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=98.49 E-value=1.5e-06 Score=108.64 Aligned_cols=199 Identities=14% Similarity=0.187 Sum_probs=118.6
Q ss_pred CceeEEEEEccc-------------------ccccCCCceecCCEEEEEEccCCCcccccCCC------CceEEEe----
Q psy13309 26 GEACWWTVHPAS-------------------KQRSEGEKVRVGDDLILVSVATERYLHTTKEN------DLSVVNA---- 76 (1568)
Q Consensus 26 ~E~cwF~I~P~~-------------------K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~~------~~~EVna---- 76 (1568)
-..|.|+|.|+. .+...|..|.+|.-|.|.+++|+.|||++... ..+.|-+
T Consensus 62 ~~~clF~i~~~~s~~~l~e~l~~e~~~~~~~~~~~~~~~v~yG~~iqL~H~~S~~~L~~~~~~~s~~ek~a~~V~L~~~~ 141 (559)
T 2xoa_A 62 LAICCFTLEQSLSVRALQEMLANTVEAGVESSQGGGHRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDA 141 (559)
T ss_dssp CGGGCEEEEEEECHHHHHHHHTC------------CCCBCBTTCEEEEEETTTCCEEEECSCCC----CCCEEEEEESSC
T ss_pred ccceEEEEEehhhHHHHHHHHHHHHHhhhhhhhccCCCcEEEeeEEEEeecccCeEEEEcCcCcccccccceEEEEEecC
Confidence 367999999932 23455889999999999999999999975432 2345543
Q ss_pred eeceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCccCccccceeEEEEecCc-c-ccCCcceEEEe
Q psy13309 77 SFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICPDRSKYLFHIVVYEGGS-V-MSQARSLWRLE 154 (1568)
Q Consensus 77 S~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~-~-~tsa~sLWeIE 154 (1568)
....+.|+|.|... +.. .|.+++.||.|+|-|...+..-+ .-.|.+.. + +...++.|.|+
T Consensus 142 ~~~~s~f~I~p~~k------~r~------~G~~V~~Gd~V~L~~~~t~~~LH------~S~~~gs~eVt~~d~nt~W~I~ 203 (559)
T 2xoa_A 142 TGEACWWTMHPASK------QRS------EGEKVRVGDDLILVSVSSERYLH------LSTASGELQVDASFMQTLWNMN 203 (559)
T ss_dssp CSSTTEEEEEESST------TSC------TTSBCBTTCEEEEEETTTCCEEE------EEC----CEEEEESSCCCEEEE
T ss_pred CCCCcEEEEEcCcc------ccC------CCCccccCCEEEEEECCCCCccc------ccCCCCCeEEEeccCCCeEEEE
Confidence 34578999999842 221 24577779999999987432211 11122111 1 34678999999
Q ss_pred ecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeecccc---cc-ccccccccccccCCcc
Q psy13309 155 LARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKD---DQ-KIVLEDKDLEVIGAPI 230 (1568)
Q Consensus 155 ~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke---~~-~~v~~~~di~~m~~~~ 230 (1568)
+-......+.+.=|+.+||.|..||+||.+..... ......++...... .. .+..+--+.. .....
T Consensus 204 ~~~~~~~~~~l~~GDvIRL~H~~t~~~L~~~~~~s---------~~~~ev~~y~~~~~~~d~~~~W~VE~v~~~-~~G~~ 273 (559)
T 2xoa_A 204 PICSCCEEGYVTGGHVLRLFHGHMDECLTISAADS---------DDQRRLVYYEGGAVCTHARSLWRLEPLRIS-WSGSH 273 (559)
T ss_dssp EEECCCCTTBCBTTCEEEEECC---CEEEECCTTC---------TTTTCBEEEECGGGGGSGGGCEEEEESCST-TTTSB
T ss_pred EcccCCccccccCCCEEEEEecCCCceeeccCCCc---------ccceEEEeecCCCcCCCCCceEEEEEeccc-cCCCc
Confidence 86543347788999999999999999999754310 00111222221100 00 0000000000 11123
Q ss_pred eeeCCcEEEEEEcccCeeeEeee
Q psy13309 231 IKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 231 I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
++. ++-+||+|+.||.||++..
T Consensus 274 ~~~-~~~fRLrH~~TG~YL~~~~ 295 (559)
T 2xoa_A 274 LRW-GQPLRIRHVTTGRYLALTE 295 (559)
T ss_dssp CCT-TCCEEEEETTTCCEEEEET
T ss_pred eEe-CCeEEEEECCcCCeeeEcC
Confidence 444 6899999999999999874
No 27
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=98.33 E-value=6.6e-07 Score=99.78 Aligned_cols=132 Identities=17% Similarity=0.258 Sum_probs=84.5
Q ss_pred eeecceeecccccccccCCceeEeecCCCccccccceecccccccccCC--CCccccccccccCCccccccCC--ccccC
Q psy13309 554 DVLCSLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLVDHVASYVPYPG--GGEKWGGNGVGDDLYSFGFDGA--HLWTG 629 (1568)
Q Consensus 554 ~vlcslcv~~G~a~~s~q~~~~~~~lp~~~lllqT~~v~~~~~~~p~~~--~g~~~gg~gvGdd~~S~gfDG~--~~w~~ 629 (1568)
.|||+..+..| ..|||++|-+++- .+.+. -|++.... .+.+. ...+|.+..||+|+.. .+|++
T Consensus 72 ~Vlg~~~f~sG-------rhYWEV~V~~~~~--~~~w~---vGV~~~s~~~~r~~~-~~~~G~~~~sw~~~~~~~~~~h~ 138 (226)
T 2afj_A 72 GVRGKRGYSRG-------LHAWEISWPLEQR--GTHAV---VGVATALAPLQADHY-AALLGSNSESWGWDIGRGKLYHQ 138 (226)
T ss_dssp SEEECCCCCCS-------EEEEEEECCCCSS--SCCCE---EEEEESSCCCSSCSS-SCCCCCSCEEEEEEGGGTSTTSS
T ss_pred eEEECCCccCC-------EEEEEEEEeccCC--CCCEE---EEecCCccccccccc-cccccCCCCcEEEEcCCCeEEEC
Confidence 57777776667 5789988833110 01111 13322111 01111 1236888999998753 57887
Q ss_pred CccccccCCCC-----CCCcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeeccC-CcceEEeecC
Q psy13309 630 GRRTEVIPGTL-----EPYIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISCSS-KLSCRFLFGG 701 (1568)
Q Consensus 630 ~~~~~~~~~~~-----~~~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~~~-~~~~~fnfGg 701 (1568)
+..... ..| ++.+..+|+|||+||.+.|+|+|+.||..++.+|..+. .+.+||++|+.. +.++.+++-|
T Consensus 139 ~~~~~~--~~~~~~~~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~~~-~~~L~P~f~l~~g~~~v~l~~~~ 213 (226)
T 2afj_A 139 SKGLEA--PQYPAGPQGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLK-GRTLYPSVSAVWGQCQVRIRYMG 213 (226)
T ss_dssp SSCCSC--SSSSCCSGGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHHHH-HHCCEEEEEECCTTSCCEEEEES
T ss_pred ccccCc--ccccccccCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEcCC-CCEEEEEEEcccCCCEEEEEEcC
Confidence 653221 123 33468899999999999999999999999998998642 359999999864 3566666433
No 28
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=97.62 E-value=0.00024 Score=77.07 Aligned_cols=121 Identities=17% Similarity=0.191 Sum_probs=83.6
Q ss_pred ccceEEEeeCCCCceeEEEEEccccc-ccCCCceecCCEEEEEEccCCCcccccC----CC-CceEEEee------ecee
Q psy13309 14 LSFDVGLQEHSQGEACWWTVHPASKQ-RSEGEKVRVGDDLILVSVATERYLHTTK----EN-DLSVVNAS------FHVT 81 (1568)
Q Consensus 14 ~af~V~L~e~~~~E~cwF~I~P~~K~-RseGe~VrvgD~ViLvsv~s~~yLH~S~----~~-~~~EVnaS------~~~T 81 (1568)
..--|++-.+..+++.||.|.|..+. ...|+.|+-||.|.|..+.|++|||.+. .+ +..||.|- ...+
T Consensus 36 ~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d 115 (187)
T 1t9f_A 36 GQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGD 115 (187)
T ss_dssp CCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETTTCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGG
T ss_pred CceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECCCCCCEeECCcCCCCCCCceEEEEecccCCCCCCC
Confidence 44568886533378999999998864 4459999999999999999999999743 23 57898762 2356
Q ss_pred eEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCccCcc------c---cceeEEEEecCccccCCcceEE
Q psy13309 82 HWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICPDRS------K---YLFHIVVYEGGSVMSQARSLWR 152 (1568)
Q Consensus 82 ~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~~~~------~---~~~~v~~~e~g~~~tsa~sLWe 152 (1568)
.|+|-.. |+.++-++.+||.|....|+... + .|+.|.-.+. ...+++|.
T Consensus 116 ~W~vei~------------------~~~~~~~~~fRL~H~~tg~yL~~~~~~lp~w~~~Q~EV~~~~~----~~~~~~W~ 173 (187)
T 1t9f_A 116 DWTVICN------------------GDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDS----ITGGSAWK 173 (187)
T ss_dssp CEEEECS------------------SSSCBTTSEEEEEETTTCCEEEEEEEECCTTSTTCEEEEEESS----CCTTCCEE
T ss_pred eEEEEEc------------------CCEEecCCeEEEEECCcCeEEecCCcccCCCCCCceEEEEecC----CCCCCEEE
Confidence 7999743 11233379999999997765321 1 2333332221 25789999
Q ss_pred Eeec
Q psy13309 153 LELA 156 (1568)
Q Consensus 153 IE~~ 156 (1568)
||-.
T Consensus 174 vee~ 177 (187)
T 1t9f_A 174 VAEG 177 (187)
T ss_dssp EECC
T ss_pred ECcc
Confidence 9853
No 29
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=97.42 E-value=0.00057 Score=74.79 Aligned_cols=123 Identities=16% Similarity=0.179 Sum_probs=85.1
Q ss_pred ccceEEEeeCCCCceeEEEEEccccc-ccCCCceecCCEEEEEEccCCCccccc----CCCCceEEEee------eceee
Q psy13309 14 LSFDVGLQEHSQGEACWWTVHPASKQ-RSEGEKVRVGDDLILVSVATERYLHTT----KENDLSVVNAS------FHVTH 82 (1568)
Q Consensus 14 ~af~V~L~e~~~~E~cwF~I~P~~K~-RseGe~VrvgD~ViLvsv~s~~yLH~S----~~~~~~EVnaS------~~~T~ 82 (1568)
..--|++-.+..+++.||.|.|.... ...|+.|+.||.|.|..+.|++|||.. ..++..||.|- .....
T Consensus 47 ~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H~~T~~~LhSH~~~~P~s~~~EVs~~~~~~~~D~~d~ 126 (199)
T 3mal_A 47 GQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPISGNLEVSCFGDDTNSDTGDH 126 (199)
T ss_dssp CCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEETTTCCEEEEEEEECTTTCSEEEEEECBTTBCCGGGC
T ss_pred CCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEECCCCCCEeECCcCCCCCCCeEEEEeccCCCCCCCCe
Confidence 34568886533577899999997653 355999999999999999999999964 23578999762 34678
Q ss_pred EEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCccCcc---------ccceeEEEEecCccccCCcceEEE
Q psy13309 83 WSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICPDRS---------KYLFHIVVYEGGSVMSQARSLWRL 153 (1568)
Q Consensus 83 WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~~~~---------~~~~~v~~~e~g~~~tsa~sLWeI 153 (1568)
|+|-.... |...+.++.|||.|....|+... -.|+.|+-.. ....+++|.|
T Consensus 127 W~Vei~~~----------------~~~~~~~~~fRL~H~~T~~yL~sh~~~lp~wg~~Q~EV~~~~----~~~~~~~W~v 186 (199)
T 3mal_A 127 WKLIIEGS----------------GKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIR----EKKADNIWLA 186 (199)
T ss_dssp EEEEESSS----------------CCBCBTTCEEEEEETTTCCEEEEEEEECCSSSTTCEEEEEES----SCCGGGCEEE
T ss_pred EEEEEcCC----------------CCEEEcCCeEEEEECCCCeEEeeCCCCCCCCCCcceEEEeeC----CCCCCCeEEe
Confidence 99976411 11223379999999997764321 1233343322 2467899999
Q ss_pred eec
Q psy13309 154 ELA 156 (1568)
Q Consensus 154 E~~ 156 (1568)
|-.
T Consensus 187 ee~ 189 (199)
T 3mal_A 187 AEG 189 (199)
T ss_dssp EEE
T ss_pred Ccc
Confidence 864
No 30
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=96.62 E-value=0.0033 Score=75.26 Aligned_cols=133 Identities=13% Similarity=0.129 Sum_probs=59.9
Q ss_pred CCceecCCEEEEEEccCCCcccccCCCC----ceEEE-------eeeceeeEEEEEeecccccccccccccccccCCCCC
Q psy13309 43 GEKVRVGDDLILVSVATERYLHTTKEND----LSVVN-------ASFHVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTE 111 (1568)
Q Consensus 43 Ge~VrvgD~ViLvsv~s~~yLH~S~~~~----~~EVn-------aS~~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr 111 (1568)
++.|..||-|.|....++.+||+..... .+++. +....+.|+|-.... +.-.|+.++
T Consensus 8 ~~~v~~GdvIRL~H~~t~~~Lhs~~~~~~~~v~~~~s~~~s~~~~~d~~s~W~IE~~~~------------~~~~G~~~~ 75 (381)
T 1n4k_A 8 DDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVEVVQH------------DPCRGGAGY 75 (381)
T ss_dssp -----CCCEEEEEETTTTEEEEEEECSSSEEEEEECCCSSSGGGCCCGGGCEEEEECC----------------------
T ss_pred CCcccCCcEEEEEEcccCCeeecCCCCCccceeeeccCccCCCCCCCCCCeEEEEEecc------------CCCCCCcee
Confidence 6789999999999999999999632221 12221 223457899976510 112456777
Q ss_pred CCcEEEEccCCCCccCccccceeEEEEe------------cC---------c---------cccCCcceEEEeecccccC
Q psy13309 112 VTNVSLYLHPGLICPDRSKYLFHIVVYE------------GG---------S---------VMSQARSLWRLELARTKWA 161 (1568)
Q Consensus 112 ~GDVVRLfH~E~~~~~~~~~~~~v~~~e------------~g---------~---------~~tsa~sLWeIE~~~~~~~ 161 (1568)
-|+.+||.|-...|+-...+....+.-. +. . ...+..+++++.+...+..
T Consensus 76 ~~~~fRLrH~~Tg~yL~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~l~~~~~~~d~~s~f~l~~~~~~~~ 155 (381)
T 1n4k_A 76 WNSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDPTTLRGG 155 (381)
T ss_dssp ---CEEEEETTTCCEEEEEEC-------------------------------CCEEEEEESCSCSGGGCEEEEC------
T ss_pred eCCeEEEEECCCCceeeEEecCcccccccccccccccccccccccccCCCcCceEEEEecCccCCchhhhccCccccccc
Confidence 8999999999876543211111000000 00 0 0112334444333322222
Q ss_pred CccceecCceEEEEcCCCceeeeeec
Q psy13309 162 GGFINWYHPMRIRHLTTGRYLSTNEN 187 (1568)
Q Consensus 162 GG~v~Wgq~fRLRHLtTG~YLav~~d 187 (1568)
-..+.-++-+||||+.||.||.....
T Consensus 156 d~~v~~~Sy~rl~H~~t~~Wl~~~~~ 181 (381)
T 1n4k_A 156 DSLVPRNSYVRLRHLCTNTWVHSTNI 181 (381)
T ss_dssp --------CBEEEEGGGTEEEEEEEE
T ss_pred ccccccCceEEEEEcccCceEEeecc
Confidence 23577778889999999999999754
No 31
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.46 E-value=0.39 Score=51.26 Aligned_cols=96 Identities=18% Similarity=0.261 Sum_probs=58.5
Q ss_pred EEEEEEee-----CCceEEeeccCCCC----CCCCCCCCCCceeEeCCcc-ccc---cCCCCC---CCCCCceEEEEeC-
Q psy13309 1016 YFEFEILT-----AGPMRVGWARVDCA----PGAQLGSDENSWAFDGFNR-HIK---INLFQQ---DKKDYSISGFSLN- 1078 (1568)
Q Consensus 1016 YfEv~v~t-----~G~mrvGWa~~~~~----~~~~vG~D~~Sy~fdG~~~-h~~---~~~yG~---~w~~GDVvGF~lN- 1078 (1568)
.|+++|.. .|.||+|..+-.-. |.....-...+|++.|+.. +++ .+.||. +.+.||+|||.++
T Consensus 51 ~~~v~I~~~~~~wsG~l~~GvT~~dP~~l~lP~~~~~L~~~~Wv~~~~~v~~ng~~~~e~~~~~l~~l~~Gd~ig~~~~~ 130 (170)
T 2e63_A 51 VFTVRIDRKVNSWSGSIEIGVTALDPSVLDFPSSATGLKGGSWVVSGCSVLRDGRSVLEEYGQDLDQLGEGDRVGVERTV 130 (170)
T ss_dssp EEEEEEEEECCSSCCCCEEEEESSCTTSCCCCSSGGGCCSSEEEESSSEEEESSCEEEESCSSCGGGCCSSCCEEEEECT
T ss_pred EEEEEEEeecCCcceeEEEEEEccChhhccCCCChhhCCCCeEEEeccccccCCcccchhccccccccCCCCEEEEEEcC
Confidence 35666543 48999999765321 2222233457899988654 332 678886 5679999994432
Q ss_pred -Ccccccc--CCCccccccccCCccceeeeecCCcEEE
Q psy13309 1079 -GELLMDA--LGGETTFADVQGEGFVPACTLGVGQRAK 1113 (1568)
Q Consensus 1079 -G~~l~~~--~g~g~AF~di~~~~~~Pa~SL~~~q~~~ 1113 (1568)
|++...- ...|+++.+++ ..+++.+-++ |+...
T Consensus 131 ~G~l~~~iNg~~~g~~~~~ip-~~LwavvDvy-G~t~~ 166 (170)
T 2e63_A 131 AGELRLWVNGRDCGVAATGLP-PRVWAVVDLY-GKCTQ 166 (170)
T ss_dssp TSCEEEEESSCEEEEEECCCC-SCEEEEEECC-TTEEE
T ss_pred CcEEEEEECCccceeeEcCCC-CcEEEEEEcc-CCEEE
Confidence 3332211 12478888886 4678888886 54433
No 32
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=89.10 E-value=0.22 Score=62.97 Aligned_cols=175 Identities=15% Similarity=0.211 Sum_probs=107.1
Q ss_pred ccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHH
Q psy13309 360 RALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNW 439 (1568)
Q Consensus 360 ~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~ 439 (1568)
+.+.+-||++--+|.++.|++||+. ++. +.| -.+.+.|..||..++|.|.+||.+|....+++.
T Consensus 195 ~~n~~iQklVAFEnaFe~Lf~Ii~~------Eg~---~~G-------givv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~ 258 (651)
T 3grl_A 195 RSNGAIQKIVAFENAFERLLDIITE------EGN---SDG-------GIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQR 258 (651)
T ss_dssp TTCHHHHHHHHHTTHHHHHHHHHHH------HTG---GGS-------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGG
T ss_pred cCCHHHHHHHHHhccHHHHHHHHHh------cCC---Ccc-------chhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHH
Confidence 7788899999999999999999943 111 111 237889999999999999999999987667777
Q ss_pred HHHHhcccccccCC---------CHHHHHHHHHhCCHHH----Hh--hc-cHHHHHHHHHHHHHcCCCc----hhhhhhc
Q psy13309 440 LFSRLGSQASSEGT---------GMLDVLHCVLIDSPEA----LN--MM-RDEHIKVIISLLEKHGRDP----KVLDVLC 499 (1568)
Q Consensus 440 L~s~l~~~q~~iG~---------gildvL~~lL~nN~el----Ln--~I-~e~hI~~fIsLL~k~~r~~----k~Ld~Ls 499 (1568)
|...+..-+....| ++++++.-++..+.+. .| .+ +.+-+..+++++...+-.. .-|..++
T Consensus 259 L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla 338 (651)
T 3grl_A 259 MKPWFEVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVS 338 (651)
T ss_dssp GGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred HHHHhCCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHH
Confidence 77666521111111 1445555555542211 11 11 1223566777776532222 2456666
Q ss_pred cccccCCcccccchHHHHhhhcCCCCcceeeecccceehhhhhhhhhCCCCccceeecceeecc
Q psy13309 500 SLCVGNGVAVRSSQNNICDYLLPGKNLLLQTQLDEHIKVIISLLEKHGRDPKVLDVLCSLCVGN 563 (1568)
Q Consensus 500 sLCvcnG~AI~~NQelIc~~LL~~~~lll~T~~v~hi~s~i~~lek~gr~p~vl~vlcslcv~~ 563 (1568)
+++..| +.||+.+.+.-.+... ....++.+|-..=.+...+++||..|-|-
T Consensus 339 ~~irgN----~~~Q~~fa~~~vp~~~---------~~p~li~lL~~~~~~~~~~~lR~Aa~~cl 389 (651)
T 3grl_A 339 EVIRGC----QVNQDYFASVNAPSNP---------PRPAIVVLLMSMVNERQPFVLRCAVLYCF 389 (651)
T ss_dssp HHHTTC----HHHHHHHHHCEESSSS---------CEEHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred HHHhCC----HHHHHHHhhccCCCCC---------CcChHHHHHHHHhcccccHHHHHHHHHHH
Confidence 655544 6899999988765421 12233333222223455688888877774
No 33
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=88.49 E-value=0.85 Score=51.39 Aligned_cols=84 Identities=23% Similarity=0.243 Sum_probs=56.6
Q ss_pred ccCCccceecCceEEEEcCCCceeeeeecC-c-----cccccccccCCCCcceEeeccccccccccccccccccCCccee
Q psy13309 159 KWAGGFINWYHPMRIRHLTTGRYLSTNENN-E-----LYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIGAPIIK 232 (1568)
Q Consensus 159 ~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~-~-----l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~~~~I~ 232 (1568)
+..|-.+.||+.+.|+|+.|++||++..+. . -..+..+....+.+.|.+.|.-. .+.+ ...+.
T Consensus 124 k~~g~~v~YG~~iqLlHv~S~kyLt~~~~~~a~~ek~a~~v~L~~~~se~s~F~I~P~~k------~r~e-----Gd~V~ 192 (246)
T 1xzz_A 124 KLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSWFYIQPFYK------LRSI-----GDSVV 192 (246)
T ss_dssp HTTTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTSEEEEEESSCCGGGCEEEEESST------TSCT-----TSBCB
T ss_pred hcCCCeEEeccEEEEEEcCCCcEEEEcCcCchhhcccceEEEEecCCCCceEEEEeecee------eccc-----CCceE
Confidence 345778999999999999999999996532 0 01122244566678888876521 0111 12355
Q ss_pred eCCcEEEEEEcccCeeeEeeec
Q psy13309 233 YGDSTVLVQHSENGLWLTYKSY 254 (1568)
Q Consensus 233 ~gdSyvrIqH~~Tg~WL~~~~~ 254 (1568)
+ +.-|.|.++.++.+||....
T Consensus 193 ~-gD~V~l~~~~~~~~Lh~S~~ 213 (246)
T 1xzz_A 193 I-GDKVVLNPVNAGQPLHASSH 213 (246)
T ss_dssp T-TCEEEEEESSSCSCEEEEEE
T ss_pred E-CCEEEEEECCCCCccccccc
Confidence 6 45688999999999997643
No 34
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=87.31 E-value=0.95 Score=48.82 Aligned_cols=100 Identities=13% Similarity=0.130 Sum_probs=60.4
Q ss_pred eeecceeEEEEEEeeCCceEEeeccCCCCC-------CCCCCCCCCceeEe---CCcc---ccc--cCCCCCC------C
Q psy13309 1009 AVSSGKWYFEFEILTAGPMRVGWARVDCAP-------GAQLGSDENSWAFD---GFNR---HIK--INLFQQD------K 1067 (1568)
Q Consensus 1009 ~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~-------~~~vG~D~~Sy~fd---G~~~---h~~--~~~yG~~------w 1067 (1568)
+.++|+.|+||++-..+...||-|.....- +..+|.++.+|+.. |..- |++ ..+.+.. -
T Consensus 46 ~ftsGrHYWEVeV~~~~~W~vGV~~~~~~r~~~~~~~~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~~~~~~~~~l~~~ 125 (186)
T 3uv9_A 46 SITSGKHYWEVDVSKKSAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIGLQEGVKYSVFQDGSSHTPFAPFIVPLSVI 125 (186)
T ss_dssp CBCSSEEEEEEECTTCSCEEEEEESCSTTTTTTTHHHHTCCCGGGTEEEEEEETTTEEEEEECCCTTSTTSCEEEECCCS
T ss_pred CCCCCCEEEEEEEcCCCcEEEEEEEEEecccccccCCCcccCCCCCEEEEEECCCCEEEEEeCCCccccCCCccCccccc
Confidence 347999999999998888999998765432 23588899999864 3221 332 1222322 2
Q ss_pred CCCceEEEEeC---CccccccC---CC-cccccccc-CCccceeeeecC
Q psy13309 1068 KDYSISGFSLN---GELLMDAL---GG-ETTFADVQ-GEGFVPACTLGV 1108 (1568)
Q Consensus 1068 ~~GDVvGF~lN---G~~l~~~~---g~-g~AF~di~-~~~~~Pa~SL~~ 1108 (1568)
.....||.+|+ |++-..+. +. =-.|.... .+.+||+.+++.
T Consensus 126 ~~p~rVGVfLDye~G~lSFYnv~d~~~lI~tF~~~~Fs~pL~P~F~~~~ 174 (186)
T 3uv9_A 126 ICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCSFSKPVFPYLNPRK 174 (186)
T ss_dssp SCCSEEEEEEETTTTEEEEEETTTTTEEEEEECSCCCSSCBEEEEECTT
T ss_pred ccCCEEEEEeecCCCEEEEEeCCCCceEEEEeCCcCCCCCEEeEEECCC
Confidence 34567886664 44433221 11 12454432 566889888754
No 35
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=85.85 E-value=1.6 Score=47.27 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=59.6
Q ss_pred ceeeecceeEEEEEEeeCCceEEeeccCCCCCC--CCCCCCCCceeEeCCcc-----ccccCCCCCCCCCCceEEEEeC-
Q psy13309 1007 NYAVSSGKWYFEFEILTAGPMRVGWARVDCAPG--AQLGSDENSWAFDGFNR-----HIKINLFQQDKKDYSISGFSLN- 1078 (1568)
Q Consensus 1007 ty~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~--~~vG~D~~Sy~fdG~~~-----h~~~~~yG~~w~~GDVvGF~lN- 1078 (1568)
+-+.++|+.|+||++-..+...||-|.....-. ..+|.++.+|+..-.++ |+..... ..-.+...||.+|+
T Consensus 56 ~~~fsSGrHYWEVev~~~~~w~vGV~~~si~Rkg~~~~~~~~~~W~l~~~~~~y~~~~~~~~~l-~~~~~~~rVGVfLDy 134 (188)
T 2vok_A 56 AQRFSSGKMYWEVDVTQKEAWDLGVCRDSVQRKGQFSLSPENGFWTIWLWQDSYEAGTSPQTTL-HIQVPPCQIGIFVDY 134 (188)
T ss_dssp SCCBSSSEEEEEEECTTCSCEEEEEEETTCCCSSCCCCSTTTTEEEEEEETTEEEECSSSCEEE-CCSSCCSEEEEEEET
T ss_pred cCcccCCCeEEEEEecCCceEEEEEeeCCcCCCCccccCCCCCEEEEEEECCEEEEEeCCccCE-ecCCCCCEEEEEEEc
Confidence 344579999999999888889999998876543 35799999999753221 2211000 01124567885553
Q ss_pred --CccccccCCCc----cccccc-cCCccceeeeec
Q psy13309 1079 --GELLMDALGGE----TTFADV-QGEGFVPACTLG 1107 (1568)
Q Consensus 1079 --G~~l~~~~g~g----~AF~di-~~~~~~Pa~SL~ 1107 (1568)
|.+-......+ -+|... -.+.++|+.++.
T Consensus 135 e~G~lSFY~v~~~~~~I~tF~~~~Fs~pL~P~F~~~ 170 (188)
T 2vok_A 135 EAGVVSFYNITDHGSLIYTFSECVFAGPLRPFFNVG 170 (188)
T ss_dssp TTTEEEEEETTTTTEEEEEECSCCCCSCEEEEEECC
T ss_pred CCCEEEEEECCCCCeeeEEecCCCCCCCEEeEEEec
Confidence 33322111111 245442 255688888775
No 36
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=85.11 E-value=2.1 Score=54.20 Aligned_cols=170 Identities=14% Similarity=0.165 Sum_probs=107.7
Q ss_pred cHHHHHHHHHHHHhHccC-CCcchh-hHHHhhhhccchhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccch
Q psy13309 328 NLNEMVMCLEDLINYFAQ-PEEDME-HEEKQNRLRALRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQS 405 (1568)
Q Consensus 328 ~l~~v~~~L~dLI~F~~~-~~~~~~-he~kq~~l~p~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~ 405 (1568)
|.+-+..+|+=|..-+.. .+++.+ ....|.......+---+++++.-|.+|+++|+.-.+|
T Consensus 75 D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~lL~~~df~----------------- 137 (651)
T 3grl_A 75 DSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSLLEEFDFH----------------- 137 (651)
T ss_dssp CHHHHHHHHHHHHHHHCCC--------------CHHHHHHHHHHHSTHHHHHHHHHTTCCCHH-----------------
T ss_pred cHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHHHHcCCccHHHHHHHhcCccHH-----------------
Confidence 445566777777543333 211100 0011222234556667889999999999999543222
Q ss_pred HHHHHHHHHHHHHHHHhhccc-hhhhhh-hhhhHHHHHHHhcccccccCCCHHHHHHHHHhCCHHHHhhcc-HHHHHHHH
Q psy13309 406 WDIISGYLYQLLAAIIKGNHT-NCAQFA-NTNRLNWLFSRLGSQASSEGTGMLDVLHCVLIDSPEALNMMR-DEHIKVII 482 (1568)
Q Consensus 406 ~~~I~~~iY~LL~~lirgN~~-N~~~fa-~~~~Ld~L~s~l~~~q~~iG~gildvL~~lL~nN~elLn~I~-e~hI~~fI 482 (1568)
+--+.-+||..++.++.. +++... .+.-|..|...++.....+....+-.|.+|-.+|+++-+.+. |+-++.++
T Consensus 138 ---vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf 214 (651)
T 3grl_A 138 ---VRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLL 214 (651)
T ss_dssp ---HHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHH
T ss_pred ---HHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHH
Confidence 234556889999988766 555444 445678888877743333333455888999999999888555 58899999
Q ss_pred HHHHHcCC------CchhhhhhccccccCCcccccchHHHHhhhc
Q psy13309 483 SLLEKHGR------DPKVLDVLCSLCVGNGVAVRSSQNNICDYLL 521 (1568)
Q Consensus 483 sLL~k~~r------~~k~Ld~LssLCvcnG~AI~~NQelIc~~LL 521 (1568)
++++..|. -.+-|.+|.+|...| ++||+++.+.=.
T Consensus 215 ~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N----~sNQ~~FrEt~~ 255 (651)
T 3grl_A 215 DIITEEGNSDGGIVVEDCLILLQNLLKNN----NSNQNFFKEGSY 255 (651)
T ss_dssp HHHHHHTGGGSHHHHHHHHHHHHHHHTTC----HHHHHHHHHTTC
T ss_pred HHHHhcCCCccchhHHHHHHHHHHHHhcC----HHHHHHHHHcCC
Confidence 99998553 124567777777653 579999887543
No 37
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=82.05 E-value=2.6 Score=43.70 Aligned_cols=59 Identities=15% Similarity=0.250 Sum_probs=43.7
Q ss_pred cEEEEccCCCCccCccccceeEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecC
Q psy13309 114 NVSLYLHPGLICPDRSKYLFHIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENN 188 (1568)
Q Consensus 114 DVVRLfH~E~~~~~~~~~~~~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~ 188 (1568)
++.|||-.. ..++.+..+|++ ..+..++|+|+.+.. ...+||.+.||+||+++...
T Consensus 11 ~~~~Ly~r~---------g~~LqI~~dG~V~Gt~~~~~~~sile~~sv~~----------g~V~I~gv~s~~YLcMn~~G 71 (144)
T 1q1u_A 11 IVTRLFSQQ---------GYFLQMHPDGTIDGTKDENSDYTLFNLIPVGL----------RVVAIQGVKASLYVAMNGEG 71 (144)
T ss_dssp EEEEEEETT---------TEEEEECTTSCEEEESCTTSGGGCEEEEEEET----------TEEEEEETTTCCEEEECTTS
T ss_pred ceEEEEEcC---------CeEEEECCCCcEeeecCCCCCceeEEEEeccC----------CEEEEEEcccCcEEEEcCCC
Confidence 899998763 234555556655 245689999998754 36899999999999999876
Q ss_pred ccc
Q psy13309 189 ELY 191 (1568)
Q Consensus 189 ~l~ 191 (1568)
.++
T Consensus 72 ~Ly 74 (144)
T 1q1u_A 72 YLY 74 (144)
T ss_dssp CEE
T ss_pred CEE
Confidence 543
No 38
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=81.01 E-value=2.9 Score=45.22 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=58.2
Q ss_pred eeeecceeEEEEEEeeCCceEEeeccCCCCCC--CCCCCCCCceeEe---CCcc---ccccCCCCCCCCCCceEEEEeC-
Q psy13309 1008 YAVSSGKWYFEFEILTAGPMRVGWARVDCAPG--AQLGSDENSWAFD---GFNR---HIKINLFQQDKKDYSISGFSLN- 1078 (1568)
Q Consensus 1008 y~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~--~~vG~D~~Sy~fd---G~~~---h~~~~~yG~~w~~GDVvGF~lN- 1078 (1568)
-+.++|+.|+||++...+...||-|.....-. ..+|.+..+|+.. |.+- |...... ..-.+...||.+|+
T Consensus 61 ~~fssGrHYWEVev~~~~~w~vGV~~~s~~Rkg~~~~~~~~~~W~l~~~~~~~y~~~~~~~~~l-~~~~~~~rVGVfLDy 139 (191)
T 2wl1_A 61 PSFLSGRRYWEVEVGDKTAWILGACKTSISRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRL-LIKEPPKRVGIFVDY 139 (191)
T ss_dssp CCBCSSEEEEEEECTTCSCEEEEEEETTCCSSSCCCCCGGGTEEEEEEEETTEEEECCSSCEEC-CCSSCCSEEEEEEET
T ss_pred ccccCCCEEEEEEeCCCCEEEEEEeeCCcCCCCccccCCCCCEEEEEEeCCCEEEEEcCCCccC-ccccCCcEEEEEEEc
Confidence 34579999999999888889999998876543 2478888889864 3221 2211110 01134568885553
Q ss_pred --CccccccCC---Cccccccc-cCCccceeeeecC
Q psy13309 1079 --GELLMDALG---GETTFADV-QGEGFVPACTLGV 1108 (1568)
Q Consensus 1079 --G~~l~~~~g---~g~AF~di-~~~~~~Pa~SL~~ 1108 (1568)
|.+-..... .=-+|... -.+.++|+.++..
T Consensus 140 e~G~lSFY~v~~~~~i~tF~~~~Fs~pl~P~F~~~~ 175 (191)
T 2wl1_A 140 RVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGT 175 (191)
T ss_dssp TTTEEEEEETTTTEEEEEECCCCCCSCEEEEEECCC
T ss_pred CCCEEEEEECCCCcceEEeCCCCCCCCEEeEEEccc
Confidence 332211110 01234442 2556888887753
No 39
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=79.53 E-value=6.2 Score=43.15 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=59.9
Q ss_pred cccccCCCceecCCEEEEEEccCCCcccccCC----CC--ceEE---E-eeeceeeEEEEEeeccccccccccccccccc
Q psy13309 37 SKQRSEGEKVRVGDDLILVSVATERYLHTTKE----ND--LSVV---N-ASFHVTHWSVQPYGTGISRMKYVMCLEVMSC 106 (1568)
Q Consensus 37 ~K~RseGe~VrvgD~ViLvsv~s~~yLH~S~~----~~--~~EV---n-aS~~~T~WkI~lf~s~~~~~~~~~~~~~yLk 106 (1568)
..+..-.-.|.+|--|-|..++|.+||-+... ++ +..| + .....+-|+|.|++ ++..+
T Consensus 104 ~~~~~~~r~v~YGq~IQLlH~~SnkyLtv~~~~~sek~~lrv~LgL~d~~~se~swF~I~P~y------K~Rse------ 171 (217)
T 3im6_A 104 TAQGGGHRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDVGLQEDTTGEACWWTIHPAS------KQRSE------ 171 (217)
T ss_dssp ------CCBCBTTCEEEEEETTTCCEEEECSCC------CCEEEEEESCCSSSTTEEEEEESS------SCCCT------
T ss_pred cccCCCCceEEeccEEEeeecccCcEEEEcCCCcccccCcEEEEEeccCCCCcceEEEEEccE------eeccC------
Confidence 44444467788999999999999999855332 22 3344 2 23467899999993 33222
Q ss_pred CCCCCCCcEEEEccCCCCccCccccceeEEEEecCc-c-ccCCcceEEEee
Q psy13309 107 GSSTEVTNVSLYLHPGLICPDRSKYLFHIVVYEGGS-V-MSQARSLWRLEL 155 (1568)
Q Consensus 107 G~~lr~GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~-~-~tsa~sLWeIE~ 155 (1568)
|.+++.||-|.|.+...+ .-.|.-.+.+.. + .+..+++|.|=+
T Consensus 172 Gd~V~~GD~ViL~sv~s~------~yLH~S~~~g~~eVn~s~~~T~W~i~p 216 (217)
T 3im6_A 172 GEKVRVGDDLILVSMSSE------RYLHLSYGNSSWHVDAAFQQTLWSVAP 216 (217)
T ss_dssp TCBCBTTCEEEEEETTTC------CEEEEEECSSSEEEEEESSCCCEEEEE
T ss_pred CCceeeCCEEEEEECCCC------ceEEeecCCCceEEeeecCCceeEEee
Confidence 456777999999987532 112222222211 1 467788898854
No 40
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=75.87 E-value=6.9 Score=42.64 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=57.6
Q ss_pred eeeecceeEEEEEEeeCCceEEeeccCCCCCC--CCCCCCCCceeEeCCcc------ccccCCCCCCCCCCceEEEEeC-
Q psy13309 1008 YAVSSGKWYFEFEILTAGPMRVGWARVDCAPG--AQLGSDENSWAFDGFNR------HIKINLFQQDKKDYSISGFSLN- 1078 (1568)
Q Consensus 1008 y~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~--~~vG~D~~Sy~fdG~~~------h~~~~~yG~~w~~GDVvGF~lN- 1078 (1568)
-+.++|+.|+||++...+...||-|.....-. ..+|.+..+|+..-.++ |...... ..-.....||.+|+
T Consensus 58 ~~fsSGrHYWEVev~~~~~w~vGV~~~si~Rkg~~~~~~~~g~W~l~~~~~~~y~~~~~~~~~l-~~~~~~~rVGVfLDy 136 (201)
T 2fbe_A 58 PRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIELSSEHGFLTVGCREGKVFAASTVPMTPL-WVSPQLHRVGIFLDV 136 (201)
T ss_dssp CCBSSSEEEEEEECTTCSEEEEEEEETTSCCSSCCCCCTTTTEEEEEEETTTEEEECSSSCEEE-CCCTTCCEEEEEEET
T ss_pred ccccCCceEEEEEeCCCCEEEEEEeeCccCCCCcccccCCCCEEEEEEeCCCEEEEEcCCcccC-ccCCCCCEEEEEEEc
Confidence 34579999999999888889999999876543 33678888998742211 1100000 01134567885553
Q ss_pred --CccccccCC---Cccccccc-cCCccceeeeec
Q psy13309 1079 --GELLMDALG---GETTFADV-QGEGFVPACTLG 1107 (1568)
Q Consensus 1079 --G~~l~~~~g---~g~AF~di-~~~~~~Pa~SL~ 1107 (1568)
|.+...... .=-+|... -.+.++|+.++.
T Consensus 137 e~G~lSFY~v~~~~~i~tF~~~~Fs~pL~P~F~~~ 171 (201)
T 2fbe_A 137 GMRSIAFYNVSDGCHIYTFIEIPVCEPWRPFFAHK 171 (201)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCCSSCEEEEEEEE
T ss_pred CCCEEEEEeCCCCceeEEEcCCCCCCCEEeEEEec
Confidence 332211110 01245542 256789998875
No 41
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=74.27 E-value=9.7 Score=40.91 Aligned_cols=44 Identities=20% Similarity=0.239 Sum_probs=30.0
Q ss_pred ccCCEEEEeeeCCCCeEEEeeCCcccc---cccccccCCCcceeeeec
Q psy13309 645 KKGDVIGVALDLSIPIITFTFNGSLVS---GAFRDFNLDGMFFPVISC 689 (1568)
Q Consensus 645 ~~GDviGc~lDl~~g~isF~~NG~~vg---~~f~~~~~dg~~fpavS~ 689 (1568)
.....||+.||.+.|.++|+ |-..-+ -.|....|.+..||+.+.
T Consensus 126 ~~p~rVGVfLDye~G~lSFY-nv~d~~~lI~tF~~~~Fs~pL~P~F~~ 172 (186)
T 3uv9_A 126 ICPDRVGVFVDYEACTVSFF-NITNHGFLIYKFSQCSFSKPVFPYLNP 172 (186)
T ss_dssp SCCSEEEEEEETTTTEEEEE-ETTTTTEEEEEECSCCCSSCBEEEEEC
T ss_pred ccCCEEEEEeecCCCEEEEE-eCCCCceEEEEeCCcCCCCCEEeEEEC
Confidence 34678999999999999999 322211 234333456888997644
No 42
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=67.84 E-value=11 Score=39.46 Aligned_cols=62 Identities=13% Similarity=0.177 Sum_probs=42.2
Q ss_pred CcEEEEccCCCCccCccccceeEEEEecCcc----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecC
Q psy13309 113 TNVSLYLHPGLICPDRSKYLFHIVVYEGGSV----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENN 188 (1568)
Q Consensus 113 GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~~----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~ 188 (1568)
|.+++||-.-. ....++.+..+|++ ..+..++|+|+.+.. ...+||.+.||+|||++...
T Consensus 13 ~~~~~LY~~~~------rtg~~LqI~~dG~V~Gt~d~~~~s~Lei~sv~~----------g~V~Ikgv~s~~YLcMn~~G 76 (155)
T 2p39_A 13 GGLIHLYTATA------RNSYHLQIHKNGHVDGAPHQTIYSALMIRSEDA----------GFVVITGVMSRRYLCMDFRG 76 (155)
T ss_dssp TTCEEEECTTS------SSCCEEEECTTSCEEEESSCCTTTCEEEEECGG----------GEEEEEETTTTEEEEECTTS
T ss_pred CCEEEEEEccC------CCceEEEECCCCcEeCccCCCCcEEEEEEeecC----------CEEEEEEeccCcEEEECCCC
Confidence 56888886420 01223444444544 246789999998753 26899999999999999876
Q ss_pred cc
Q psy13309 189 EL 190 (1568)
Q Consensus 189 ~l 190 (1568)
.+
T Consensus 77 ~L 78 (155)
T 2p39_A 77 NI 78 (155)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 43
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=64.10 E-value=21 Score=36.35 Aligned_cols=85 Identities=16% Similarity=0.271 Sum_probs=54.1
Q ss_pred eEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEee
Q psy13309 134 HIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLR 208 (1568)
Q Consensus 134 ~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~ 208 (1568)
++-+..+|++ ..+..|+|+|..+.. ...+||-+.||.||++..+..+. .. ...++.+.|.-.
T Consensus 18 ~L~I~~dG~V~Gt~~~~~~~s~l~~~~v~~----------G~V~I~g~~sg~yL~m~~~G~v~--Gs-~~~s~ec~flE~ 84 (132)
T 3q7x_A 18 FLRINPDGTVDGTRDRSDPGIQFQISPEGN----------GEVLLRSTETGQFLRINPDGTVD--GT-RDRSDPGIQFQI 84 (132)
T ss_dssp EEEECTTSBEEEECCTTCGGGCEEEEEEET----------TEEEEEETTTCCEEEECTTSBEE--EE-CC-CCGGGCEEE
T ss_pred EEEECCCCcEEeecCCCCCCcEEEEEeccc----------CEEEEEEEcccEEEEECCCCCEe--ec-cCCCCCceeEEE
Confidence 4455556655 246889999999864 15899999999999998875432 11 111222222111
Q ss_pred ccccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEeee
Q psy13309 209 QEKDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 209 ~~ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
+.....++.|+.+.||.+|-.+.
T Consensus 85 ----------------------~~~~~g~v~ikg~~sg~YLamnk 107 (132)
T 3q7x_A 85 ----------------------SPEGNGEVLLRSTETGQFLRINP 107 (132)
T ss_dssp ----------------------EEEETTEEEEEETTTCCEEEECT
T ss_pred ----------------------EeecCcEEEEEeccCCeEEEECC
Confidence 11114689999999999887653
No 44
>3hbw_A Fibroblast growth factor 13; beta-trefoil fold, alternative splicing, polymorphism, hormone; 1.90A {Homo sapiens} PDB: 4dck_C
Probab=60.91 E-value=10 Score=41.18 Aligned_cols=64 Identities=20% Similarity=0.270 Sum_probs=45.8
Q ss_pred ccccCCCCCCCcEEEEccCCCCccCccccceeEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcC
Q psy13309 103 VMSCGSSTEVTNVSLYLHPGLICPDRSKYLFHIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLT 177 (1568)
Q Consensus 103 ~yLkG~~lr~GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLt 177 (1568)
.+|+| +|-|||-.- ..++.+..+|.+ ..+..++|+|..+.. ...+||.+.
T Consensus 12 p~l~g------~~rqLYcr~---------G~hLqI~~dG~V~GT~~~~s~~slLei~sv~~----------GvV~IkGv~ 66 (193)
T 3hbw_A 12 PQLKG------IVTKLYSRQ---------GYHLQLQADGTIDGTKDEDSTYTLFNLIPVGL----------RVVAIQGVQ 66 (193)
T ss_dssp CCEEE------EEEEEEETT---------SCEEEECTTSCEEEESCTTCGGGCEEEEEEET----------TEEEEEETT
T ss_pred ccccc------eeeEEEEcC---------CeEEEEcCCCcEEcccCCCCCceEEEEEeccC----------CEEEEEEee
Confidence 45666 788888763 223455556655 246789999998754 248999999
Q ss_pred CCceeeeeecCccc
Q psy13309 178 TGRYLSTNENNELY 191 (1568)
Q Consensus 178 TG~YLav~~d~~l~ 191 (1568)
||+||+++....++
T Consensus 67 S~~YLcMn~~G~Ly 80 (193)
T 3hbw_A 67 TKLYLAMNSEGYLY 80 (193)
T ss_dssp TCCEEEECTTSCEE
T ss_pred ceeEEEEcCCCCCc
Confidence 99999999876543
No 45
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=60.48 E-value=26 Score=37.33 Aligned_cols=117 Identities=15% Similarity=0.231 Sum_probs=78.1
Q ss_pred hhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhc
Q psy13309 366 QDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLG 445 (1568)
Q Consensus 366 QkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~ 445 (1568)
.+.+.+.|++..++++|..-+ ..+.......|..+..++..+.........++.|...+.
T Consensus 37 ~~~~~~~g~i~~L~~ll~~~~--------------------~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~ 96 (252)
T 4hxt_A 37 IKAIVDAGGVEVLVKLLTSTD--------------------SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLT 96 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTCSC--------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHHhCCC--------------------HHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHc
Confidence 455667899999999994210 234566667788888877777777666667888888887
Q ss_pred ccccccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHcCCCc----hhhhhhcccccc
Q psy13309 446 SQASSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKHGRDP----KVLDVLCSLCVG 504 (1568)
Q Consensus 446 ~~q~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~~r~~----k~Ld~LssLCvc 504 (1568)
......-..+..+|..+...+++....+ ...-|..++.+|+. .++ ..+..|+.||..
T Consensus 97 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~--~~~~~~~~a~~~L~~l~~~ 158 (252)
T 4hxt_A 97 STDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS--TDSEVQKEAARALANIASG 158 (252)
T ss_dssp CSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcC--CCHHHHHHHHHHHHHHHcC
Confidence 5333322234477777777788776643 34567888888874 333 356677777764
No 46
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.71 E-value=8.4 Score=41.01 Aligned_cols=65 Identities=18% Similarity=0.217 Sum_probs=44.2
Q ss_pred ccccccCCccccCCccccccCCCCCC---CcccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeee
Q psy13309 617 YSFGFDGAHLWTGGRRTEVIPGTLEP---YIKKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVI 687 (1568)
Q Consensus 617 ~S~gfDG~~~w~~~~~~~~~~~~~~~---~~~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpav 687 (1568)
.+|++-|+..-.++... +..|++ .+..||++|..+| ..|.+.|.+||..-|.++.... ...++++
T Consensus 91 ~~Wv~~~~~v~~ng~~~---~e~~~~~l~~l~~Gd~ig~~~~-~~G~l~~~iNg~~~g~~~~~ip--~~Lwavv 158 (170)
T 2e63_A 91 GSWVVSGCSVLRDGRSV---LEEYGQDLDQLGEGDRVGVERT-VAGELRLWVNGRDCGVAATGLP--PRVWAVV 158 (170)
T ss_dssp SEEEESSSEEEESSCEE---EESCSSCGGGCCSSCCEEEEEC-TTSCEEEEESSCEEEEEECCCC--SCEEEEE
T ss_pred CeEEEeccccccCCccc---chhccccccccCCCCEEEEEEc-CCcEEEEEECCccceeeEcCCC--CcEEEEE
Confidence 44666665444444332 235665 3579999999887 7799999999999998887443 4555554
No 47
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=58.71 E-value=33 Score=35.44 Aligned_cols=81 Identities=17% Similarity=0.325 Sum_probs=51.5
Q ss_pred EEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcce-Eee
Q psy13309 135 IVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTF-CLR 208 (1568)
Q Consensus 135 v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F-~f~ 208 (1568)
+-+..+|++ ..+..|+|+|+.+.. ...||+-+.||.||++..+..+. .. ...++.+.| ..+
T Consensus 54 LqI~~dG~V~Gt~~~~s~~s~Lei~sv~~----------GvV~I~Gv~tg~yL~Mn~dG~l~--Gs-~~~s~ec~flEi~ 120 (142)
T 3p6i_A 54 LRINPDGTVDGTRDRSDTHIQFQISPEGN----------GEVLLKSTETGQYLRINPDGTVD--GT-RDRSDTHIQFQIS 120 (142)
T ss_dssp EEECTTSBEEEECCTTCTTCCEEEEEEET----------TEEEEEETTTCCEEEECTTSBEE--EE-CCTTCTTCCEEEE
T ss_pred EEECCCCcCcCcCCCCCCceEEEEEeccC----------CEEEEEEecCceEEeECCCCCCc--cc-cCCCCCeEEEEEE
Confidence 444445554 246789999998764 24799999999999998876432 11 112222332 122
Q ss_pred ccccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEe
Q psy13309 209 QEKDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTY 251 (1568)
Q Consensus 209 ~~ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~ 251 (1568)
+ -...+|.|+.++||.+|-.
T Consensus 121 ~-----------------------v~~G~V~Ikgv~Sg~YLaM 140 (142)
T 3p6i_A 121 P-----------------------EGNGEVLLKSTETGQYLRI 140 (142)
T ss_dssp E-----------------------CSSSCEEEEETTTTEEEEE
T ss_pred E-----------------------EeCCEEEEEEEecceEEEE
Confidence 1 1136899999999998753
No 48
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=58.32 E-value=13 Score=38.55 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=41.5
Q ss_pred CcEEEEccCCCCccCccccceeEEEEecCccc-----cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeec
Q psy13309 113 TNVSLYLHPGLICPDRSKYLFHIVVYEGGSVM-----SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNEN 187 (1568)
Q Consensus 113 GDVVRLfH~E~~~~~~~~~~~~v~~~e~g~~~-----tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d 187 (1568)
+.++|||..-. ..++.+..+|++. .+..++|+|+.+.. ..++||.+.||+||++++.
T Consensus 18 ~r~~rLY~r~~--------g~~LqI~~dG~V~Gt~~~~~~~s~l~i~sv~~----------G~V~I~gv~s~~YLcMn~~ 79 (146)
T 1bfg_A 18 KDPKRLYCKNG--------GFFLRIHPDGRVDGVREKSDPHIKLQLQAEER----------GVVSIKGVSANRYLAMKED 79 (146)
T ss_dssp -CCEEEEETTT--------TEEEEECTTSCEEEECCTTCGGGCEEEEECST----------TEEEEEETTTTEEEEECTT
T ss_pred CccEEEEEcCC--------CEEEEECCCCeEEeecCCCCCceEEEEEeccC----------CEEEEEEcccCcEEEEcCC
Confidence 46777776520 2334455556552 36789999998753 2689999999999999977
Q ss_pred Ccc
Q psy13309 188 NEL 190 (1568)
Q Consensus 188 ~~l 190 (1568)
..+
T Consensus 80 G~L 82 (146)
T 1bfg_A 80 GRL 82 (146)
T ss_dssp SCE
T ss_pred CCE
Confidence 654
No 49
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=55.11 E-value=57 Score=40.24 Aligned_cols=111 Identities=16% Similarity=0.260 Sum_probs=59.3
Q ss_pred EEEEEEccCCCcccccCC-CCceEEEeee---ceeeEEEEEeecccccccccccccccccCCCCCCCcEEEEccCCCCcc
Q psy13309 51 DLILVSVATERYLHTTKE-NDLSVVNASF---HVTHWSVQPYGTGISRMKYVMCLEVMSCGSSTEVTNVSLYLHPGLICP 126 (1568)
Q Consensus 51 ~ViLvsv~s~~yLH~S~~-~~~~EVnaS~---~~T~WkI~lf~s~~~~~~~~~~~~~yLkG~~lr~GDVVRLfH~E~~~~ 126 (1568)
||.|-|+..++|.|+|.. .++.-||+-. ..+...+. |..|....+ -....
T Consensus 141 qv~l~s~~r~~y~~l~~~~~~~~~~d~~~pwg~d~~~~l~-f~~g~y~l~--t~~~~----------------------- 194 (493)
T 3llp_A 141 QVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA-FQDQRYSVQ--TADHR----------------------- 194 (493)
T ss_dssp EEEEEETTTTEEEEEEC--CCEEEEEESSCCSGGGCEEEE-ECSSSEEEE--CTTSC-----------------------
T ss_pred EEEEeecccceeEEcCCCCCCeEEECCCCCCCCCeeEEEE-ECCCcEEEE--ECCCc-----------------------
Confidence 688999999999999988 7777777621 12333322 222111000 00001
Q ss_pred CccccceeEEEEecCcc--ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcc
Q psy13309 127 DRSKYLFHIVVYEGGSV--MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASST 204 (1568)
Q Consensus 127 ~~~~~~~~v~~~e~g~~--~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~ 204 (1568)
++.-.|+. .-+..+.|.+|+.. | .+-||- ..|+||++....+........+..+...
T Consensus 195 ---------fL~~dg~L~~~p~~~~~ftl~~~~-----g------~vAlks-~~GkYL~~~g~~g~L~~~~~~~~g~~E~ 253 (493)
T 3llp_A 195 ---------FLRHDGRLVARPEPATGYTLEFRS-----G------KVAFRD-CEGRYLAPSGPSGTLKAGKATKVGKDEL 253 (493)
T ss_dssp ---------EECTTSCEESSCCGGGCBEEEEC-------------CEEEEC-TTSCBEEEETTTTEEEECC---CCGGGC
T ss_pred ---------eECCCCccccCCCcccEEEEEEeC-----C------EEEEEe-CCCCEEeEECCCCeEEeccCCCCCCceE
Confidence 22222221 23678889999842 2 377888 9999999976333322222223344456
Q ss_pred eEee
Q psy13309 205 FCLR 208 (1568)
Q Consensus 205 F~f~ 208 (1568)
|.+.
T Consensus 254 F~L~ 257 (493)
T 3llp_A 254 FALE 257 (493)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6655
No 50
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=54.44 E-value=34 Score=36.83 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=31.0
Q ss_pred cCCEEEEeeeCCCCeEEEeeC--CcccccccccccCCCcceeeeecc
Q psy13309 646 KGDVIGVALDLSIPIITFTFN--GSLVSGAFRDFNLDGMFFPVISCS 690 (1568)
Q Consensus 646 ~GDviGc~lDl~~g~isF~~N--G~~vg~~f~~~~~dg~~fpavS~~ 690 (1568)
....||+.||.+.|.++|+-- +..+ -.|....|.+..||+.++.
T Consensus 129 ~~~rVGVfLDye~G~lSFY~v~~~~~i-~tF~~~~Fs~pl~P~F~~~ 174 (191)
T 2wl1_A 129 PPKRVGIFVDYRVGSISFYNVTARSHI-YTFASCSFSGPLQPIFSPG 174 (191)
T ss_dssp CCSEEEEEEETTTTEEEEEETTTTEEE-EEECCCCCCSCEEEEEECC
T ss_pred CCcEEEEEEEcCCCEEEEEECCCCcce-EEeCCCCCCCCEEeEEEcc
Confidence 457999999999999999942 2211 2344445678899987654
No 51
>3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens}
Probab=53.88 E-value=52 Score=33.89 Aligned_cols=85 Identities=18% Similarity=0.296 Sum_probs=53.8
Q ss_pred eEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEee
Q psy13309 134 HIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLR 208 (1568)
Q Consensus 134 ~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~ 208 (1568)
++.+..+|++ ..+..++|+|+.+.. | ..|||-+.||+||++..+..+.- . ....+...|.=+
T Consensus 21 ~LqI~~dG~V~Gt~~~~~~~s~l~~~sv~~----G------~V~I~gv~sg~yL~m~~~G~v~G--s-~~~~~ec~flE~ 87 (143)
T 3snv_A 21 YLRINPDGTVDGTRDRSDTHIQFQISPEGN----G------EVLLKSTETGQYLRINPDGTVDG--T-RDRSDTHIQFQI 87 (143)
T ss_dssp EEEECTTSBEEEESCTTCTTSEEEEEEEET----T------EEEEEETTTTEEEEECTTSBEEE--E-CCTTCTTSEEEE
T ss_pred EEEECCCCCEeeecCCCCCceEEEEEeccC----C------eEEEEEEcccEEEeECCCCCEee--c-ccCCCcceEEEE
Confidence 3444555554 346789999999753 2 57899999999999988764321 1 112223333211
Q ss_pred ccccccccccccccccccCCcceeeCCcEEEEEEcccCeeeEeee
Q psy13309 209 QEKDDQKIVLEDKDLEVIGAPIIKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 209 ~~ke~~~~v~~~~di~~m~~~~I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
+.....+|.|+.+.+|.+|-.+.
T Consensus 88 ----------------------~~e~~g~v~i~~~~sg~Ylamnk 110 (143)
T 3snv_A 88 ----------------------SPEGNGEVLLKSTETGQYLRINP 110 (143)
T ss_dssp ----------------------EECSTTEEEEEETTTCCEEEECT
T ss_pred ----------------------EecCCcEEEEEEeeCCEEEEEcC
Confidence 11124678999999998887654
No 52
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=53.84 E-value=28 Score=37.43 Aligned_cols=45 Identities=16% Similarity=0.230 Sum_probs=31.5
Q ss_pred cCCEEEEeeeCCCCeEEEeeCCc--ccccccccccCCCcceeeeecc
Q psy13309 646 KGDVIGVALDLSIPIITFTFNGS--LVSGAFRDFNLDGMFFPVISCS 690 (1568)
Q Consensus 646 ~GDviGc~lDl~~g~isF~~NG~--~vg~~f~~~~~dg~~fpavS~~ 690 (1568)
....||+.||.+.|.++|+-... .+--.|....|.+.+||+.++.
T Consensus 124 ~~~rVGVfLDye~G~lSFY~v~~~~~~I~tF~~~~Fs~pL~P~F~~~ 170 (188)
T 2vok_A 124 PPCQIGIFVDYEAGVVSFYNITDHGSLIYTFSECVFAGPLRPFFNVG 170 (188)
T ss_dssp CCSEEEEEEETTTTEEEEEETTTTTEEEEEECSCCCCSCEEEEEECC
T ss_pred CCCEEEEEEEcCCCEEEEEECCCCCeeeEEecCCCCCCCEEeEEEec
Confidence 45789999999999999995322 1112444445678899987553
No 53
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=53.26 E-value=14 Score=39.81 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=74.1
Q ss_pred chhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHH
Q psy13309 362 LRNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLF 441 (1568)
Q Consensus 362 ~r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~ 441 (1568)
...++..+.+.|+|..|+++|+.- + ..+.......|..++.++..+.........++.|.
T Consensus 127 ~~~~~~~~~~~~~i~~L~~lL~~~----~----------------~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~ 186 (252)
T 4db8_A 127 GNEQIQAVIDAGALPALVQLLSSP----N----------------EQILQEALWALSNIASGGNEQIQAVIDAGALPALV 186 (252)
T ss_dssp CHHHHHHHHHTTHHHHHHHGGGCS----C----------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHH
T ss_pred CchHHHHHHHCCCHHHHHHHHhCC----C----------------HHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHH
Confidence 344657788899999999998421 0 12445666777778887766665555455678888
Q ss_pred HHhcccccccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHcCCCch----hhhhhcccc
Q psy13309 442 SRLGSQASSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKHGRDPK----VLDVLCSLC 502 (1568)
Q Consensus 442 s~l~~~q~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~~r~~k----~Ld~LssLC 502 (1568)
+.+.......-..++.+|..+...+++....+ ...-|..++.++.. .+++ -+..|+.||
T Consensus 187 ~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~--~~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 187 QLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH--ENEKIQKEAQEALEKLQ 250 (252)
T ss_dssp HGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTTC--SSSHHHHTHHHHHHTTC
T ss_pred HHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCC--CCHHHHHHHHHHHHHHh
Confidence 88775332222234578888887888766643 33456777777754 3333 344555554
No 54
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=51.02 E-value=19 Score=38.17 Aligned_cols=47 Identities=21% Similarity=0.328 Sum_probs=33.9
Q ss_pred EEEEecCccc-----cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 135 IVVYEGGSVM-----SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 135 v~~~e~g~~~-----tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
+-+..+|++. .+..++|++|.+.. | ...+||.+.||+||+++....+
T Consensus 43 LqI~~dG~V~Gt~~~~~~~s~L~~~s~~~---g------~~V~I~gv~s~~YLcMn~~G~L 94 (164)
T 2fdb_M 43 VQVLANKRINAMAEDGDPFAKLIVETDTF---G------SRVRVRGAETGLYICMNKKGKL 94 (164)
T ss_dssp EEECTTSCEEEEECTTCGGGCEEEEEEET---T------TEEEEEETTTCCEEEECTTSCE
T ss_pred EEECCCCcEEeeccCCCcceEEEEEEecc---c------eEEEEEEeccCcEEEEcCCCCE
Confidence 4444455542 35678999997543 2 3699999999999999987654
No 55
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=49.88 E-value=19 Score=37.64 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=71.5
Q ss_pred hhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHh
Q psy13309 365 RQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRL 444 (1568)
Q Consensus 365 RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l 444 (1568)
..+.+.+.|.|..|+++|+..+ ..+.......|..++.++..+.........++.|...+
T Consensus 88 ~~~~i~~~g~i~~L~~lL~~~~--------------------~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll 147 (210)
T 4db6_A 88 QIQAVIDAGALPALVQLLSSPN--------------------EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 147 (210)
T ss_dssp HHHHHHHTTCHHHHHHHTTCSC--------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHCCCHHHHHHHHcCCc--------------------HHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHH
Confidence 3455668899999999994321 12445566677777777766655454455678888887
Q ss_pred cccccccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHcCCCch----hhhhhccccc
Q psy13309 445 GSQASSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKHGRDPK----VLDVLCSLCV 503 (1568)
Q Consensus 445 ~~~q~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCv 503 (1568)
.......-..+..+|..+..++++....+ ...-|..++.++.. .+++ -+..|..||.
T Consensus 148 ~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~--~~~~v~~~a~~aL~~l~~ 209 (210)
T 4db6_A 148 SSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH--ENEKIQKEAQEALEKLQS 209 (210)
T ss_dssp TCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGC--SCHHHHHHHHHHHHHHCC
T ss_pred cCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhC--CCHHHHHHHHHHHHHHhc
Confidence 64322222234477888888877766544 33456777777763 3332 3455555543
No 56
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=49.65 E-value=22 Score=36.81 Aligned_cols=47 Identities=17% Similarity=0.364 Sum_probs=35.1
Q ss_pred EEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccc
Q psy13309 135 IVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELY 191 (1568)
Q Consensus 135 v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~ 191 (1568)
+-+..+|++ ..+..++|+|+.+.. ...+||.+.||+||+++....++
T Consensus 27 LqI~~dG~V~Gt~~~~~~~s~l~~~sv~~----------g~V~I~gv~s~~YLcmn~~G~Ly 78 (145)
T 1nun_A 27 LKIEKNGKVSGTKKENCPYSILEITSVEI----------GVVAVKAINSNYYLAMNKKGKLY 78 (145)
T ss_dssp EEECTTSCEEEECCSCCTTSCEEEEEEET----------TEEEEEETTTTEEEEECTTSBEE
T ss_pred EEECCCCcEeeecCCCCCceeEEEEEecC----------CeEEEEEcccCcEEEEcCCCCEe
Confidence 444444554 246789999999754 26899999999999999876543
No 57
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=49.38 E-value=21 Score=37.04 Aligned_cols=48 Identities=23% Similarity=0.394 Sum_probs=35.7
Q ss_pred eEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccc
Q psy13309 134 HIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELY 191 (1568)
Q Consensus 134 ~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~ 191 (1568)
++.+..+|++ ..+..++|+|+.+.. ..++||.+.||+||++++...++
T Consensus 28 ~LqI~~dG~V~Gt~~~~~~~s~l~i~sv~~----------G~V~I~gv~s~~YLcMn~~G~Ly 80 (146)
T 1rg8_A 28 FLRILPDGTVDGTRDRSDQHIQLQLSAESV----------GEVYIKSTETGQYLAMDTDGLLY 80 (146)
T ss_dssp EEEECTTSCEEEECCTTCTTCCEEEEEEET----------TEEEEEETTTCCEEEECTTSCEE
T ss_pred EEEECCCCcEeeeccCCCCceEEEEEeecC----------CeEEEEEcccCcEEEECCCCCEe
Confidence 3444445554 246789999999754 26899999999999999876543
No 58
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=48.19 E-value=25 Score=37.47 Aligned_cols=120 Identities=15% Similarity=0.227 Sum_probs=81.0
Q ss_pred hhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHH
Q psy13309 363 RNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFS 442 (1568)
Q Consensus 363 r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s 442 (1568)
...++.+.+.|++..++++|+.- + ..+.......|..++.++..++........++.|.+
T Consensus 76 ~~~~~~~~~~~~i~~l~~ll~~~----~----------------~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ 135 (252)
T 4hxt_A 76 DEAIKAIVDAGGVEVLVKLLTST----D----------------SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVK 135 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCS----S----------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred hHHHHHHHHCCCHHHHHHHHcCC----C----------------HHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHH
Confidence 34455667889999999999421 0 235566777888888777777766665556788888
Q ss_pred HhcccccccCCCHHHHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCc----hhhhhhcccccc
Q psy13309 443 RLGSQASSEGTGMLDVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDP----KVLDVLCSLCVG 504 (1568)
Q Consensus 443 ~l~~~q~~iG~gildvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~----k~Ld~LssLCvc 504 (1568)
.+.......-.....+|..+..+++.... .+...-|..++.+|.. .++ ..+..|+.||.+
T Consensus 136 ~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~--~~~~v~~~a~~~L~~l~~~ 200 (252)
T 4hxt_A 136 LLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS--TDSEVQKEAARALANIASG 200 (252)
T ss_dssp HTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHTTS
T ss_pred HHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCC--CCHHHHHHHHHHHHHHHcC
Confidence 88754333333355778888877877655 4445667889999874 344 356778888763
No 59
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=47.91 E-value=24 Score=35.74 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=28.6
Q ss_pred CcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 147 ARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 147 a~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
..++|+|+.+.. ...+||.+.||+||++++...+
T Consensus 34 ~~s~l~~~sv~~----------g~V~I~gv~s~~YLcmn~~G~L 67 (128)
T 1ijt_A 34 RDSLLELSPVER----------GVVSIFGVASRFFVAMSSKGKL 67 (128)
T ss_dssp GGGCEEEEEEET----------TEEEEEETTTTEEEEECTTCCE
T ss_pred ccceEEEEeccC----------CEEEEEEcccCcEEEEcCCCCE
Confidence 489999999753 2689999999999999987654
No 60
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=46.73 E-value=13 Score=40.13 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=34.7
Q ss_pred eeeecceeEEEEEEeeCCceEEeeccCCCCCC--CCCCCCCCceeEe
Q psy13309 1008 YAVSSGKWYFEFEILTAGPMRVGWARVDCAPG--AQLGSDENSWAFD 1052 (1568)
Q Consensus 1008 y~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~~--~~vG~D~~Sy~fd 1052 (1568)
=+.++|+.|+||++-..+...||-|.....-. ..++.++.+|+..
T Consensus 61 ~~fssGrhYWEVev~~~~~W~lGV~~~s~~Rkg~~~~~~~~~~W~l~ 107 (193)
T 3kb5_A 61 QQLSEGEHYWEVDVGDKPRWALGVIAAEAPRRGRLHAVPSQGLWLLG 107 (193)
T ss_dssp CCBCSSEEEEEEECTTCSSEEEEEEETTSCCSSSCCCSGGGTEEEEE
T ss_pred CcccCCCEEEEEEeCcCceEEEEEeeCCcCcCCCcCCCCCCCEEEEE
Confidence 34579999999999988889999998876542 2355667788863
No 61
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=46.16 E-value=23 Score=36.44 Aligned_cols=47 Identities=17% Similarity=0.317 Sum_probs=35.4
Q ss_pred eEEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 134 HIVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 134 ~v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
++-+..+|++ ..+..++|+|+.+.. ...+||.+.||+||+++....+
T Consensus 22 ~L~I~~dG~V~Gt~~~~~~~s~l~~~sv~~----------g~V~I~gv~s~~YLcmn~~G~L 73 (140)
T 1qql_A 22 YLRIDKRGKVKGTQEMRNSYNIMEIRTVAV----------GIVAIKGVESEYYLAMNKEGKL 73 (140)
T ss_dssp EEEECTTCCEEEESCTTCSTTCEEEEEEET----------TEEEEEETTTCCCCEECTTSCE
T ss_pred EEEECCCCeEEeecCCCCCceEEEEEeecC----------CEEEEEEcccCcEEEEcCCCCE
Confidence 4445555555 246789999999754 2689999999999999987654
No 62
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=45.90 E-value=24 Score=37.74 Aligned_cols=47 Identities=23% Similarity=0.429 Sum_probs=34.7
Q ss_pred EEEEecCcc-----ccCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccc
Q psy13309 135 IVVYEGGSV-----MSQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELY 191 (1568)
Q Consensus 135 v~~~e~g~~-----~tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~ 191 (1568)
+-+..+|++ ..+..++|+|+.+.. ..++||.+.||+|||++....++
T Consensus 40 LqI~~dG~V~Gt~~~~s~~silei~sv~~----------g~V~I~gv~s~~YLcMn~~G~Ly 91 (174)
T 1ihk_A 40 LEIFPNGTIQGTRKDHSRFGILEFISIAV----------GLVSIRGVDSGLYLGMNEKGELY 91 (174)
T ss_dssp EEECTTSCEEEESSTTCGGGCEEEEEEET----------TEEEEEETTTCCEEEECTTCCEE
T ss_pred EEECCCCcEEeecCCCCCcceEEEEeccC----------ceEEEEEcccCcEEEEcCCCCEe
Confidence 444445554 246789999999753 26899999999999999876543
No 63
>3f1r_A FGF-20, fibroblast growth factor 20; beta-trefoil fold, polymorphism, secreted, hormone; 2.50A {Homo sapiens}
Probab=40.83 E-value=34 Score=37.59 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=30.3
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELY 191 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~ 191 (1568)
.+..|+|+|+.+.. ...+||.+.||+|||++....++
T Consensus 92 ~s~yslLei~sv~~----------G~V~IkGv~S~~YLcMn~~G~LY 128 (211)
T 3f1r_A 92 HSLFGILEFISVAV----------GLVSIRGVDSGLYLGMNDKGELY 128 (211)
T ss_dssp TCSSSEEEEEEEET----------TEEEEEETTTCCEEEECTTSCEE
T ss_pred CCCcceeeEEeccC----------CEEEEEEeecceEEEECCCCCCc
Confidence 46789999999753 25899999999999999876543
No 64
>3p6j_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; 1.35A {Synthetic}
Probab=38.36 E-value=89 Score=32.20 Aligned_cols=73 Identities=16% Similarity=0.262 Sum_probs=46.8
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeecccccccccccccccc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLE 224 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~ 224 (1568)
.+..++|+|..+.. ...||+-..||.||++..+..+.- +...++.+.|.-.
T Consensus 59 ~~~~s~lei~sv~~----------G~V~L~g~~sg~yL~mn~~G~l~G---s~~~t~ecsflEi---------------- 109 (142)
T 3p6j_A 59 SDTHIQFQISPEGN----------GEVLLKSTETGQYLRINPDGTVDG---TRDRSDTHIQFQI---------------- 109 (142)
T ss_dssp TCGGGCEEEEEEET----------TEEEEEETTTTEEEEECTTSBEEE---ECCTTCGGGCEEE----------------
T ss_pred CCCceEEEEEEccC----------CEEEEEEecCCEEEeECCCCCEee---cccCCCCceEEEE----------------
Confidence 46789999988754 247999999999999988764321 1112222333211
Q ss_pred ccCCcceeeCCcEEEEEEcccCeeeEee
Q psy13309 225 VIGAPIIKYGDSTVLVQHSENGLWLTYK 252 (1568)
Q Consensus 225 ~m~~~~I~~gdSyvrIqH~~Tg~WL~~~ 252 (1568)
+......|+|+.+.||.+|-.+
T Consensus 110 ------~~en~y~v~i~g~~sg~YLamn 131 (142)
T 3p6j_A 110 ------SPEGNGEVLLKSTETGQYLRIN 131 (142)
T ss_dssp ------EECSTTCEEEEETTTCCEEEEC
T ss_pred ------EeecCcEEEEEEecCCEEEEEC
Confidence 0111356789999999877755
No 65
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=38.16 E-value=30 Score=36.57 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=29.9
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
.+..++|+|+.+.. ...+||.+.||+|||++....+
T Consensus 40 ~~~~siLei~sv~~----------g~V~I~gv~s~~YLcMn~~G~L 75 (162)
T 1pwa_A 40 QSAHSLLEIKAVAL----------RTVAIKGVHSVRYLCMGADGKM 75 (162)
T ss_dssp CCGGGCEEEEEEET----------TEEEEEETTTCCEEEECGGGCE
T ss_pred CCCccEEEEEeecC----------CEEEEEEcccCcEEEEcCCCCE
Confidence 36789999999754 3689999999999999987654
No 66
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=38.07 E-value=61 Score=34.30 Aligned_cols=89 Identities=11% Similarity=0.141 Sum_probs=47.4
Q ss_pred EEEEEee-----CCceEEeeccCCCC-CC--CC------CCCCCCceeEeCCccccccCCCCCCCCCCceEEEEeC--Cc
Q psy13309 1017 FEFEILT-----AGPMRVGWARVDCA-PG--AQ------LGSDENSWAFDGFNRHIKINLFQQDKKDYSISGFSLN--GE 1080 (1568)
Q Consensus 1017 fEv~v~t-----~G~mrvGWa~~~~~-~~--~~------vG~D~~Sy~fdG~~~h~~~~~yG~~w~~GDVvGF~lN--G~ 1080 (1568)
|+++|.. .|.||||..+-.-. .+ .+ |-.-...|++. -.+.|+ ..||++||.++ |+
T Consensus 51 ~~v~I~~~~~~wsG~l~~GvT~~dP~~l~~~lP~~a~~dL~~~~~~W~~~------l~~~~~---~~g~~l~f~v~~~G~ 121 (168)
T 2yue_A 51 ICVKFAEISNNWNGGIRFGFTSNDPVTLEGTLPKYACPDLTNRPGFWAKA------LHEQYC---EKDNILYYYVNGAGD 121 (168)
T ss_dssp EEEEEEECCSSSSSCCEEEEESSCGGGTTTCCCSSSSSHHHHSTTBCCEE------CCSTTC---CSSCEEEEEECTTSE
T ss_pred EEEEEEeecCCcceeEEEeeeecCHHHcCCCCCCcCchHHhcCCCEEEEE------eccccc---cCCCEEEEEEcCCCE
Confidence 6666653 48999999765421 11 00 11112333321 123343 56899994432 33
Q ss_pred cccccC--CCcccccccc-CCccceeeeec-CCcEEEE
Q psy13309 1081 LLMDAL--GGETTFADVQ-GEGFVPACTLG-VGQRAKL 1114 (1568)
Q Consensus 1081 ~l~~~~--g~g~AF~di~-~~~~~Pa~SL~-~~q~~~~ 1114 (1568)
+...-+ ..|+++++++ +..+++.+-|+ .-++|++
T Consensus 122 l~~~iNg~~~g~~~~~V~~~~pLwavvDvyG~t~~V~i 159 (168)
T 2yue_A 122 VIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEF 159 (168)
T ss_dssp EEEEESSCEEEEEEECCCCSSCCEEEEECCSSCSEEEE
T ss_pred EEEEECCCccEEEEcCCCCCCceEEEEEccCCeEEEEE
Confidence 322212 1367888886 56688988884 4445554
No 67
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=37.82 E-value=45 Score=34.69 Aligned_cols=117 Identities=16% Similarity=0.196 Sum_probs=78.2
Q ss_pred hhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhc
Q psy13309 366 QDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLG 445 (1568)
Q Consensus 366 QkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~ 445 (1568)
+..+.+.|.|..|+++|...+ ..+.......|..++.+|..+.........|+.|...+.
T Consensus 47 ~~~i~~~g~i~~L~~lL~~~~--------------------~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~ 106 (210)
T 4db6_A 47 IQAVIDAGALPALVQLLSSPN--------------------EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 106 (210)
T ss_dssp HHHHHHTTHHHHHHHHTTCSC--------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHcCCHHHHHHHHcCCC--------------------HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHc
Confidence 456777899999999994210 124455667788888887777766665567888888887
Q ss_pred ccccccCCCHHHHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCch----hhhhhcccccc
Q psy13309 446 SQASSEGTGMLDVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDPK----VLDVLCSLCVG 504 (1568)
Q Consensus 446 ~~q~~iG~gildvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCvc 504 (1568)
......-.....+|..+..++++... .+...-|..++.+|+. .+++ .+..|+.||..
T Consensus 107 ~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~--~~~~v~~~a~~aL~~l~~~ 168 (210)
T 4db6_A 107 SPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS--PNEQILQEALWALSNIASG 168 (210)
T ss_dssp CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHHTS
T ss_pred CCcHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcC--CCHHHHHHHHHHHHHHHcC
Confidence 54333322344777778777877665 3445668888888875 3443 45667777764
No 68
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=36.90 E-value=51 Score=37.70 Aligned_cols=121 Identities=17% Similarity=0.267 Sum_probs=78.0
Q ss_pred hhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHH
Q psy13309 363 RNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFS 442 (1568)
Q Consensus 363 r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s 442 (1568)
..-|+.+.+.|.|..|+.+|+.-. + ..+.......|..++++|..+...|....-|+.|..
T Consensus 114 ~~~~~~vv~~g~l~~Ll~LL~~~~---~----------------~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~ 174 (296)
T 1xqr_A 114 AAIQEQVLGLGALRKLLRLLDRDA---C----------------DTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMR 174 (296)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHCS---C----------------HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHccCC---C----------------HHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHH
Confidence 445667778899999999995310 0 123445556677889988877666765556888887
Q ss_pred HhcccccccCCCHHHHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCch----hhhhhcccccc
Q psy13309 443 RLGSQASSEGTGMLDVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDPK----VLDVLCSLCVG 504 (1568)
Q Consensus 443 ~l~~~q~~iG~gildvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCvc 504 (1568)
.+.......-..+.-+|..+..++++... .+...-|..++.||.. .+++ .|..|++|...
T Consensus 175 lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL~~--~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 175 AMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALVRT--EHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHHTS--CCSTHHHHHHHHHHHHHTT
T ss_pred HHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHHcC--CChhHHHHHHHHHHHHHhC
Confidence 77643222211233667777777777666 4455778999999975 3543 55666666544
No 69
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=34.49 E-value=37 Score=36.85 Aligned_cols=36 Identities=19% Similarity=0.372 Sum_probs=29.7
Q ss_pred cCCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCcc
Q psy13309 145 SQARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNEL 190 (1568)
Q Consensus 145 tsa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l 190 (1568)
.+..++|+|+.+.. ...+||.+.||+|||++....+
T Consensus 52 ~s~~siLei~sv~~----------G~V~IkGv~S~~YLcMn~~G~L 87 (194)
T 2p23_A 52 QSAHSLLEIKAVAL----------RTVAIKGVHSVRYLCMGADGKM 87 (194)
T ss_dssp CCTTTCEEEEEEET----------TEEEEEETTTCCEEEECGGGCE
T ss_pred CCcccEEEEEeccC----------CEEEEEEcccCcEEEECCCCCE
Confidence 36789999999753 2689999999999999987654
No 70
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=34.10 E-value=52 Score=41.23 Aligned_cols=44 Identities=16% Similarity=0.311 Sum_probs=31.7
Q ss_pred eeecceeEEEEEEeeCCceEEeeccCCCCC-------CCCCCCCCCceeEe
Q psy13309 1009 AVSSGKWYFEFEILTAGPMRVGWARVDCAP-------GAQLGSDENSWAFD 1052 (1568)
Q Consensus 1009 ~v~~GkwYfEv~v~t~G~mrvGWa~~~~~~-------~~~vG~D~~Sy~fd 1052 (1568)
..++|+.|+||+|-....-.||-|.....- ...++.+..+|+..
T Consensus 466 ~f~sGrhyWEV~v~~~~~w~~Gv~~~~~~~~~~~~~~~~~~~~~~g~w~~~ 516 (602)
T 4b3n_A 466 SITSGKHYWEVDVSKKSAWILGVCAGFQSDAMYNIEQNENYQPKYGYWVIG 516 (602)
T ss_dssp CBSSSEEEEEEECTTCSCEEEEEECCCCTTTSSTHHHHCCCCGGGTEEEEE
T ss_pred CCCCEEEEEEEEECCCeeEEEEEeeccccccccccCCCcccCCCCcEEEEE
Confidence 347999999999988888889987643221 22366677788864
No 71
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=31.84 E-value=1.4e+02 Score=34.12 Aligned_cols=89 Identities=12% Similarity=0.158 Sum_probs=61.2
Q ss_pred hhhhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHH
Q psy13309 363 RNRQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFS 442 (1568)
Q Consensus 363 r~RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s 442 (1568)
...+..|.+.|.|..|+.+|..- + .++-.....+|..++.++..++..+.....++.|+.
T Consensus 157 ~~~~~~~~~~ggi~~L~~lL~~~-------d-------------~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~ 216 (296)
T 1xqr_A 157 EAGLLQFLRLDGFSVLMRAMQQQ-------V-------------QKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVA 216 (296)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHSS-------C-------------HHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHH
T ss_pred cHHHHHHHHCCCHHHHHHHHcCC-------C-------------HHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHH
Confidence 34456677789999999999421 1 123445556777777777777777777777889998
Q ss_pred HhcccccccCCCHHHHHHHHHhCCHHHHh
Q psy13309 443 RLGSQASSEGTGMLDVLHCVLIDSPEALN 471 (1568)
Q Consensus 443 ~l~~~q~~iG~gildvL~~lL~nN~elLn 471 (1568)
.+......+-..++.+|..|+.++++...
T Consensus 217 LL~~~d~~v~~~al~aL~~l~~~~~~~~~ 245 (296)
T 1xqr_A 217 LVRTEHSPFHEHVLGALCSLVTDFPQGVR 245 (296)
T ss_dssp HHTSCCSTHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHcCCChhHHHHHHHHHHHHHhCChhHHH
Confidence 88765433333355888888998887655
No 72
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=30.53 E-value=49 Score=35.07 Aligned_cols=44 Identities=9% Similarity=0.202 Sum_probs=35.6
Q ss_pred ccCCEEEEeeeCCCCeEEEeeCCcccccccccccCCCcceeeeec
Q psy13309 645 KKGDVIGVALDLSIPIITFTFNGSLVSGAFRDFNLDGMFFPVISC 689 (1568)
Q Consensus 645 ~~GDviGc~lDl~~g~isF~~NG~~vg~~f~~~~~dg~~fpavS~ 689 (1568)
..||++|..+| ..|.+.|.+||...|..+.........++++-+
T Consensus 107 ~~g~~l~f~v~-~~G~l~~~iNg~~~g~~~~~V~~~~pLwavvDv 150 (168)
T 2yue_A 107 EKDNILYYYVN-GAGDVIYGINNEEKGVILTGIDTRSLLWTVIDI 150 (168)
T ss_dssp CSSCEEEEEEC-TTSEEEEEESSCEEEEEEECCCCSSCCEEEEEC
T ss_pred cCCCEEEEEEc-CCCEEEEEECCCccEEEEcCCCCCCceEEEEEc
Confidence 67999999887 899999999999999988777665556655533
No 73
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=30.26 E-value=62 Score=34.65 Aligned_cols=117 Identities=16% Similarity=0.202 Sum_probs=76.2
Q ss_pred hhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhcc
Q psy13309 367 DLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGS 446 (1568)
Q Consensus 367 kLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~ 446 (1568)
+.+.+.|+|..++++|...+ ..+.......|..++.++..++........++.|...+..
T Consensus 48 ~~~~~~g~i~~L~~lL~~~~--------------------~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~ 107 (252)
T 4db8_A 48 QAVIDAGALPALVQLLSSPN--------------------EQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS 107 (252)
T ss_dssp HHHHHTTHHHHHHHGGGCSC--------------------HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC
T ss_pred HHHHHcCcHHHHHHHHcCCC--------------------HHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcC
Confidence 34667799999999994311 1245666778888888888887776665568888888875
Q ss_pred cccccCCCHHHHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCc----hhhhhhccccccC
Q psy13309 447 QASSEGTGMLDVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDP----KVLDVLCSLCVGN 505 (1568)
Q Consensus 447 ~q~~iG~gildvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~----k~Ld~LssLCvcn 505 (1568)
.....-.....+|..+..+++.... .+...-|..++.+|+. .++ ..+..|+.||..+
T Consensus 108 ~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~--~~~~v~~~a~~~L~~l~~~~ 169 (252)
T 4db8_A 108 PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS--PNEQILQEALWALSNIASGG 169 (252)
T ss_dssp SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC--SCHHHHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhC--CCHHHHHHHHHHHHHHHcCC
Confidence 3322222234667767666665533 4444567888888864 344 3566777777644
No 74
>1ups_A Glcnac-alpha-1,4-GAL-releasing endo-beta- galactosidase; endo-galactosidase, glycosyl hydrolase, PSI, protein structure initiative; 1.82A {Clostridium perfringens} SCOP: b.29.1.2 b.42.2.3
Probab=28.16 E-value=90 Score=37.58 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=43.1
Q ss_pred cceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeeccccccccccccccccccC
Q psy13309 148 RSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEVIG 227 (1568)
Q Consensus 148 ~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~m~ 227 (1568)
+.-|++|..+ ...|||+..||.||.+....+. .....++..-....+.
T Consensus 324 ~~~W~~~~~~-----------g~~~ikn~~tg~y~~~~~~~~~--~~~~~~~~~w~~~~w~------------------- 371 (420)
T 1ups_A 324 NAKWSKEYRD-----------GYTLLKNNETGEYLNIENQTGY--IEHGKVPKTWWSAQWS------------------- 371 (420)
T ss_dssp GGCEEEEEET-----------TEEEEEETTTCCEEECTTCCSB--CEEECCCTTCGGGCEE-------------------
T ss_pred CceeEEEecC-----------CcEEEeeccccceEccccCCCc--cccccCCCCcccceEE-------------------
Confidence 3578877643 2379999999999999764332 1111111111111111
Q ss_pred CcceeeCCcEEEEEEccc-CeeeEeee
Q psy13309 228 APIIKYGDSTVLVQHSEN-GLWLTYKS 253 (1568)
Q Consensus 228 ~~~I~~gdSyvrIqH~~T-g~WL~~~~ 253 (1568)
+.+++.|+||+..-+ +.+|++++
T Consensus 372 ---~~~~~G~~~i~~~~~~~~~l~~e~ 395 (420)
T 1ups_A 372 ---EVPVDGYTRFVNRWKPNMSIHTES 395 (420)
T ss_dssp ---EEEETTEEEEEESSSTTCEEECTT
T ss_pred ---EecCCCeEEEEEeccCCceEEEec
Confidence 334478999999877 78888765
No 75
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=25.59 E-value=68 Score=34.78 Aligned_cols=45 Identities=16% Similarity=0.188 Sum_probs=31.0
Q ss_pred cCCEEEEeeeCCCCeEEEeeCCc-ccccccccccCCCcceeeeecc
Q psy13309 646 KGDVIGVALDLSIPIITFTFNGS-LVSGAFRDFNLDGMFFPVISCS 690 (1568)
Q Consensus 646 ~GDviGc~lDl~~g~isF~~NG~-~vg~~f~~~~~dg~~fpavS~~ 690 (1568)
....||+.||.+.|+++|+-... .+--.|....|.+.+||+.++.
T Consensus 126 ~~~rVGVfLDye~G~lSFY~v~~~~~i~tF~~~~Fs~pL~P~F~~~ 171 (201)
T 2fbe_A 126 QLHRVGIFLDVGMRSIAFYNVSDGCHIYTFIEIPVCEPWRPFFAHK 171 (201)
T ss_dssp TCCEEEEEEETTTTEEEEEETTTTEEEEEECSCCCSSCEEEEEEEE
T ss_pred CCCEEEEEEEcCCCEEEEEeCCCCceeEEEcCCCCCCCEEeEEEec
Confidence 45789999999999999995321 1112344334668899987553
No 76
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=23.41 E-value=1.7e+02 Score=30.27 Aligned_cols=70 Identities=13% Similarity=0.224 Sum_probs=44.6
Q ss_pred CCcceEEEeecccccCCccceecCceEEEEcCCCceeeeeecCccccccccccCCCCcceEeeccccccccccccccccc
Q psy13309 146 QARSLWRLELARTKWAGGFINWYHPMRIRHLTTGRYLSTNENNELYLVTRDEATTASSTFCLRQEKDDQKIVLEDKDLEV 225 (1568)
Q Consensus 146 sa~sLWeIE~~~~~~~GG~v~Wgq~fRLRHLtTG~YLav~~d~~l~l~~~~~a~~~~T~F~f~~~ke~~~~v~~~~di~~ 225 (1568)
+....|++|.. .+ ..++||-- .|+||++..+. .+.....+......|.+...
T Consensus 59 ~~~E~f~l~~~----~~------~~v~LRs~-~GkYLs~~~~G--~v~a~a~~~g~~E~F~l~~~--------------- 110 (155)
T 2yug_A 59 SPPEQFTAVKL----SD------SRIALKSG-YGKYLGINSDG--LVVGRSDAIGPREQWEPVFQ--------------- 110 (155)
T ss_dssp CTTTCEEEEEC----SS------SCEEEEET-TSCBEEECSSS--BEEECCSSCCTTTBEEEECS---------------
T ss_pred CCcceEEEEEC----CC------CEEEEEeC-CCCEEEecCCC--cEEeccCCCCCCCEEEEEEE---------------
Confidence 45667888773 21 26789874 59999998764 23333344456677766532
Q ss_pred cCCcceeeCCcEEEEEEcccCeeeEeee
Q psy13309 226 IGAPIIKYGDSTVLVQHSENGLWLTYKS 253 (1568)
Q Consensus 226 m~~~~I~~gdSyvrIqH~~Tg~WL~~~~ 253 (1568)
|.-+.||+ .+|.+|+++.
T Consensus 111 ---------~G~~aLra-~nG~yl~~~~ 128 (155)
T 2yug_A 111 ---------DGKMALLA-SNSCFIRCNE 128 (155)
T ss_dssp ---------TTCCEEEE-TTSCBEEECS
T ss_pred ---------CCEEEEEe-CCCCEEEEcC
Confidence 22245788 6899999764
No 77
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=22.83 E-value=1.4e+02 Score=38.71 Aligned_cols=118 Identities=11% Similarity=0.050 Sum_probs=69.8
Q ss_pred hhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHhccc
Q psy13309 368 LFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRLGSQ 447 (1568)
Q Consensus 368 LlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l~~~ 447 (1568)
.+-+.|.|..|+++|...+ ..+.......|..++..+..+........-++-|.+.+...
T Consensus 229 ~i~~~g~I~~Lv~lL~~~~--------------------~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~ 288 (780)
T 2z6g_A 229 AIFKSGGIPALVNMLGSPV--------------------DSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT 288 (780)
T ss_dssp HHHHTTHHHHHHHHTTCSC--------------------HHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCC
T ss_pred HHHHcCCHHHHHHHHcCCC--------------------HHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcC
Confidence 3445699999999984210 12455666777777777655554444344577788777642
Q ss_pred ccccCCCHHHHHHHHHhCCHHHHh-hccHHHHHHHHHHHHHcCCCch----hhhhhccccccCC
Q psy13309 448 ASSEGTGMLDVLHCVLIDSPEALN-MMRDEHIKVIISLLEKHGRDPK----VLDVLCSLCVGNG 506 (1568)
Q Consensus 448 q~~iG~gildvL~~lL~nN~elLn-~I~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCvcnG 506 (1568)
....-.-+.++|..+-..|++... .+...-|..++.+|+.. .... .+..|..||.|..
T Consensus 289 ~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~-~~~~~~~~a~~aL~~Ls~~~~ 351 (780)
T 2z6g_A 289 NVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-TYEKLLWTTSRVLKVLSVCSS 351 (780)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHTSTT
T ss_pred CHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcC-CHHHHHHHHHHHHHHhhcChH
Confidence 111000122455555556766655 34456688999999862 2222 3667888887753
No 78
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=21.07 E-value=1.6e+02 Score=36.85 Aligned_cols=120 Identities=12% Similarity=0.075 Sum_probs=72.3
Q ss_pred hhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHh
Q psy13309 365 RQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRL 444 (1568)
Q Consensus 365 RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l 444 (1568)
|+.+ .+.|.|..|+++|...+ ..+.......|..++.++..+...+.....|+.|.+.+
T Consensus 91 ~~~i-~~~g~i~~Lv~lL~~~~--------------------~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL 149 (644)
T 2z6h_A 91 LLAI-FKSGGIPALVKMLGSPV--------------------DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL 149 (644)
T ss_dssp HHHH-HTTTHHHHHHHHTTCSS--------------------HHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGG
T ss_pred HHHH-HHcCCHHHHHHHHhCCC--------------------HHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHH
Confidence 4444 45599999999984210 23456667778888877655554444445688888888
Q ss_pred cccccccCCCHHHHHHHHHhCCHHHHhh-ccHHHHHHHHHHHHHcCCCch----hhhhhccccccCC
Q psy13309 445 GSQASSEGTGMLDVLHCVLIDSPEALNM-MRDEHIKVIISLLEKHGRDPK----VLDVLCSLCVGNG 506 (1568)
Q Consensus 445 ~~~q~~iG~gildvL~~lL~nN~elLn~-I~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCvcnG 506 (1568)
..-....-.-..++|..+-..+++.-.. +...-|..++.+|+.. ...+ .+..|..||.|..
T Consensus 150 ~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~-~~~~~~~~a~~~L~nLs~~~~ 215 (644)
T 2z6h_A 150 NKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-TYEKLLWTTSRVLKVLSVCSS 215 (644)
T ss_dssp GCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTC-CCHHHHHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcC-ChHHHHHHHHHHHHHHhcCcc
Confidence 7432111001124566666567765553 3446688999999863 2222 4567777887643
No 79
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=20.72 E-value=1.7e+02 Score=34.73 Aligned_cols=119 Identities=12% Similarity=0.077 Sum_probs=71.5
Q ss_pred hhhhhhhhhhHHHHHHHHhhcccccCccccccccCCcccchHHHHHHHHHHHHHHHHhhccchhhhhhhhhhHHHHHHHh
Q psy13309 365 RQDLFQEEGILNLILEAIDKINVITSQGFLVNLAGDESGQSWDIISGYLYQLLAAIIKGNHTNCAQFANTNRLNWLFSRL 444 (1568)
Q Consensus 365 RQkLlREqgvI~lll~iLd~l~~~~~~~~~~~l~~ee~~~~~~~I~~~iY~LL~~lirgN~~N~~~fa~~~~Ld~L~s~l 444 (1568)
|+.+ .+.|.|..++++|... + ..+.......|..++..+..+.........++-|.+.+
T Consensus 94 ~~~i-~~~g~i~~L~~lL~~~----~----------------~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll 152 (529)
T 1jdh_A 94 LLAI-FKSGGIPALVKMLGSP----V----------------DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALL 152 (529)
T ss_dssp HHHH-HHTTHHHHHHHHTTCS----C----------------HHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGG
T ss_pred HHHH-HHcCCHHHHHHHHcCC----C----------------HHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHH
Confidence 4444 4569999999998421 0 12455666777777777655555454445678888887
Q ss_pred cccccccCCCHHHHHHHHHhCCHHHHhhc-cHHHHHHHHHHHHHcCCCch----hhhhhccccccC
Q psy13309 445 GSQASSEGTGMLDVLHCVLIDSPEALNMM-RDEHIKVIISLLEKHGRDPK----VLDVLCSLCVGN 505 (1568)
Q Consensus 445 ~~~q~~iG~gildvL~~lL~nN~elLn~I-~e~hI~~fIsLL~k~~r~~k----~Ld~LssLCvcn 505 (1568)
.........-...+|..+-.+|++....| ...-|..++.+|+.. .... .+..|..||.|.
T Consensus 153 ~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~-~~~~~~~~a~~~L~~l~~~~ 217 (529)
T 1jdh_A 153 NKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTY-TYEKLLWTTSRVLKVLSVCS 217 (529)
T ss_dssp GCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTTST
T ss_pred hcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhC-ChHHHHHHHHHHHHHHhcCc
Confidence 74221111112246666666777766533 345688999999873 2222 345677777654
Done!