BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13314
(161 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P91645|CAC1A_DROME Voltage-dependent calcium channel type A subunit alpha-1
OS=Drosophila melanogaster GN=cac PE=2 SV=3
Length = 1851
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 133/144 (92%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHY E +ML+N+
Sbjct: 1326 FLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNM 1385
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG+KCP+RLA KKLIRMNMPLD++ VQFTTT+FALIRENLSIKMR +EMDQAD
Sbjct: 1386 DPPLGFGNKCPNRLAYKKLIRMNMPLDDELRVQFTTTLFALIRENLSIKMRAPEEMDQAD 1445
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
ELR+TI +IWP+++KKMLNLL+P
Sbjct: 1446 MELRETITNIWPLQAKKMLNLLVP 1469
>sp|C9D7C2|CAC1A_APIME Voltage-dependent calcium channel type A subunit alpha-1 OS=Apis
mellifera GN=CAC PE=2 SV=1
Length = 1904
Score = 248 bits (634), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 132/144 (91%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHY E +ML+N+
Sbjct: 1449 FLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYTEMYDMLKNM 1508
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG+KCP+RLA KKLIRMNMP+D D V FTTT+FALIRENL+IK+R A E +QA+
Sbjct: 1509 DPPLGFGNKCPNRLAYKKLIRMNMPVDVDLKVNFTTTLFALIRENLNIKVRRASERNQAN 1568
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELRDTIRSIWP+++KKML+LL+P
Sbjct: 1569 EELRDTIRSIWPLQAKKMLDLLIP 1592
>sp|P56698|CAC1B_DIPOM Probable voltage-dependent N-type calcium channel subunit alpha-1B
OS=Diplobatis ommata PE=2 SV=1
Length = 2326
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 109/144 (75%), Gaps = 1/144 (0%)
Query: 14 LMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNIE 73
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEF+R+WAEYDP A G+I Y + EMLR++
Sbjct: 1695 LMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPGARGRITYNDMYEMLRHMC 1754
Query: 74 PPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE-MDQAD 132
PPLG G KCP R+A K+L+RMNMP+ ED SV FT+T+ ALIR L +K+ Q D
Sbjct: 1755 PPLGLGKKCPARVAYKRLVRMNMPIAEDGSVHFTSTLMALIRTALDVKISPGGAYQQQCD 1814
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
ELR I ++WP S+K L++L+P
Sbjct: 1815 AELRKEITAVWPNLSQKFLDILVP 1838
>sp|P56699|CAC1E_DIPOM Probable voltage-dependent R-type calcium channel subunit alpha-1E
OS=Diplobatis ommata PE=2 SV=1
Length = 2223
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEFVR+WAEYD A G+IHY + +ML +
Sbjct: 1652 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTDMYQMLTLM 1711
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G KCP ++A K+L+ MNMP+ ED++V FT+T+ LIR L IK+ R + Q
Sbjct: 1712 SPPLGLGKKCPSKVAYKRLVLMNMPVTEDKTVHFTSTLMGLIRTALQIKLARGGADKQQL 1771
Query: 132 DEELRDTIRSIWPIESKKMLNLLLP 156
D ELR I +IWP S+K L+LL+P
Sbjct: 1772 DAELRKEIMTIWPHLSQKTLDLLVP 1796
>sp|Q02294|CAC1B_RAT Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus
norvegicus GN=Cacna1b PE=1 SV=1
Length = 2336
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEF+R+WAEYDP A G+I Y + EML+++
Sbjct: 1697 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHM 1756
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPL-DEDQSVQFTTTMFALIRENLSIKMRCAD-EMDQ 130
PPLG G KCP R+A K+L+RMNMP+ +ED +V FT+T+ ALIR L IK+ A + Q
Sbjct: 1757 SPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQ 1816
Query: 131 ADEELRDTIRSIWPIESKKMLNLLLP 156
D ELR I S+W +K L+LL+P
Sbjct: 1817 CDAELRKEISSVWANLPQKTLDLLVP 1842
>sp|O55017|CAC1B_MOUSE Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus
musculus GN=Cacna1b PE=1 SV=1
Length = 2327
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/146 (60%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEF+R+WAEYDP A G+I Y + EML+++
Sbjct: 1688 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHM 1747
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPL-DEDQSVQFTTTMFALIRENLSIKMRCAD-EMDQ 130
PPLG G KCP R+A K+L+RMNMP+ +ED +V FT+T+ ALIR L IK+ A + Q
Sbjct: 1748 SPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQ 1807
Query: 131 ADEELRDTIRSIWPIESKKMLNLLLP 156
D ELR I S+W +K L+LL+P
Sbjct: 1808 CDAELRKEISSVWANLPQKTLDLLVP 1833
>sp|P54282|CAC1A_RAT Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Rattus
norvegicus GN=Cacna1a PE=1 SV=1
Length = 2212
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDE+VR+WAEYDP A G+IHYK+ +LR I
Sbjct: 1751 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKDMYSLLRVI 1810
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G KCP R+A K+L+RM++P+ +D +V F +T+ ALIR L IK+ + + Q
Sbjct: 1811 SPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQM 1870
Query: 132 DEELRDTIRSIWPIESKKMLNLLL-PNKS 159
D ELR + +IWP S+K L+LL+ P+KS
Sbjct: 1871 DAELRKEMMAIWPNLSQKTLDLLVTPHKS 1899
>sp|P97445|CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Mus
musculus GN=Cacna1a PE=1 SV=2
Length = 2368
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDE+VR+WAEYDP A G+IHYK+ +LR I
Sbjct: 1751 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAACGRIHYKDMYSLLRVI 1810
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G KCP R+A K+L+RM++P+ +D +V F +T+ ALIR L IK+ + + Q
Sbjct: 1811 SPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQM 1870
Query: 132 DEELRDTIRSIWPIESKKMLNLLL-PNKS 159
D ELR + +IWP S+K L+LL+ P+KS
Sbjct: 1871 DAELRKEMMAIWPNLSQKTLDLLVTPHKS 1899
>sp|Q15878|CAC1E_HUMAN Voltage-dependent R-type calcium channel subunit alpha-1E OS=Homo
sapiens GN=CACNA1E PE=1 SV=3
Length = 2313
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEFVR+WAEYD A G+IHY E EML +
Sbjct: 1712 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLM 1771
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G +CP ++A K+L+ MNMP+ ED +V FT+T+ ALIR L IK+ + + Q
Sbjct: 1772 SPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQL 1831
Query: 132 DEELRDTIRSIWPIESKKMLNLLLP 156
D EL+ +IWP S+KML+LL+P
Sbjct: 1832 DSELQKETLAIWPHLSQKMLDLLVP 1856
>sp|Q02343|CAC1E_RABIT Voltage-dependent R-type calcium channel subunit alpha-1E
OS=Oryctolagus cuniculus GN=CACNA1E PE=2 SV=1
Length = 2259
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEFVR+WAEYD A G+IHY E EML +
Sbjct: 1702 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLM 1761
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G +CP ++A K+L+ MNMP+ ED +V FT+T+ ALIR L IK+ + + Q
Sbjct: 1762 SPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQL 1821
Query: 132 DEELRDTIRSIWPIESKKMLNLLLP 156
D EL+ +IWP S+KML+LL+P
Sbjct: 1822 DSELQKETLAIWPHLSQKMLDLLVP 1846
>sp|Q07652|CAC1E_RAT Voltage-dependent R-type calcium channel subunit alpha-1E OS=Rattus
norvegicus GN=Cacna1e PE=1 SV=1
Length = 2222
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEFVR+WAEYD A G+IHY E EML +
Sbjct: 1664 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLM 1723
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G +CP ++A K+L+ MNMP+ ED +V FT+T+ ALIR L IK+ + + Q
Sbjct: 1724 SPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQL 1783
Query: 132 DEELRDTIRSIWPIESKKMLNLLLP 156
D EL+ +IWP S+KML+LL+P
Sbjct: 1784 DSELQKETLAIWPHLSQKMLDLLVP 1808
>sp|Q61290|CAC1E_MOUSE Voltage-dependent R-type calcium channel subunit alpha-1E OS=Mus
musculus GN=Cacna1e PE=1 SV=1
Length = 2272
Score = 182 bits (463), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 108/145 (74%), Gaps = 1/145 (0%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEFVR+WAEYD A G+IHY E EML +
Sbjct: 1715 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEMLTLM 1774
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G +CP ++A K+L+ MNMP+ ED +V FT+T+ ALIR L IK+ + + Q
Sbjct: 1775 SPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQL 1834
Query: 132 DEELRDTIRSIWPIESKKMLNLLLP 156
D EL+ +IWP S+KML+LL+P
Sbjct: 1835 DSELQKETLAIWPHLSQKMLDLLVP 1859
>sp|Q05152|CAC1B_RABIT Voltage-dependent N-type calcium channel subunit alpha-1B
OS=Oryctolagus cuniculus GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEF+R+WAEYDP A G+I Y + EML+++
Sbjct: 1700 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYSDMFEMLKHM 1759
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPL-DEDQSVQFTTTMFALIRENLSIKMRCAD-EMDQ 130
PPLG G KCP R+A K+L+RMNMP+ ED +V FT+T+ ALIR L IK+ A + Q
Sbjct: 1760 SPPLGLGKKCPARVAYKRLVRMNMPISSEDMTVHFTSTLMALIRTALDIKLAPAGTKQHQ 1819
Query: 131 ADEELRDTIRSIWPIESKKMLNLLLP 156
D ELR I +W +K L+LL+P
Sbjct: 1820 CDAELRKEISCVWANLPQKTLDLLVP 1845
>sp|Q00975|CAC1B_HUMAN Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo
sapiens GN=CACNA1B PE=1 SV=1
Length = 2339
Score = 182 bits (461), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/146 (59%), Positives = 109/146 (74%), Gaps = 2/146 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDEF+R+WAEYDP A G+I Y + EML+++
Sbjct: 1697 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYNDMFEMLKHM 1756
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPL-DEDQSVQFTTTMFALIRENLSIKMRCAD-EMDQ 130
PPLG G KCP R+A K+L+RMNMP+ +ED +V FT+T+ ALIR L IK+ A + Q
Sbjct: 1757 SPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKLAPAGTKQHQ 1816
Query: 131 ADEELRDTIRSIWPIESKKMLNLLLP 156
D ELR I +W +K L+LL+P
Sbjct: 1817 CDAELRKEISVVWANLPQKTLDLLVP 1842
>sp|Q99244|CAC1D_MESAU Voltage-dependent L-type calcium channel subunit alpha-1D
OS=Mesocricetus auratus GN=CACNA1D PE=2 SV=2
Length = 1610
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 108/149 (72%), Gaps = 2/149 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1451 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRI 1510
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1511 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTE--GNLEQAN 1568
Query: 133 EELRDTIRSIWPIESKKMLNLLLPNKSGK 161
EELR I+ IW S K+L+ ++P G+
Sbjct: 1569 EELRAVIKKIWKKTSMKLLDQVVPPAGGQ 1597
>sp|P22002|CAC1C_RAT Voltage-dependent L-type calcium channel subunit alpha-1C OS=Rattus
norvegicus GN=Cacna1c PE=1 SV=1
Length = 2169
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIWAEYDP A G+I + + V +LR I
Sbjct: 1494 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI 1553
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1554 QPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTE--GNLEQAN 1611
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1612 EELRAIIKKIWKRTSMKLLDQVVP 1635
>sp|P15381|CAC1C_RABIT Voltage-dependent L-type calcium channel subunit alpha-1C
OS=Oryctolagus cuniculus GN=CACNA1C PE=1 SV=1
Length = 2171
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIWAEYDP A G+I + + V +LR I
Sbjct: 1495 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI 1554
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1555 QPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTE--GNLEQAN 1612
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1613 EELRAIIKKIWKRTSMKLLDQVVP 1636
>sp|Q13936|CAC1C_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1C OS=Homo
sapiens GN=CACNA1C PE=1 SV=4
Length = 2221
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIWAEYDP A G+I + + V +LR I
Sbjct: 1513 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI 1572
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1573 QPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTE--GNLEQAN 1630
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1631 EELRAIIKKIWKRTSMKLLDQVVP 1654
>sp|Q01815|CAC1C_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1C OS=Mus
musculus GN=Cacna1c PE=1 SV=1
Length = 2139
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIWAEYDP A G+I + + V +LR I
Sbjct: 1465 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI 1524
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1525 QPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTE--GNLEQAN 1582
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1583 EELRAIIKKIWKRTSMKLLDQVVP 1606
>sp|O73700|CAC1D_CHICK Voltage-dependent L-type calcium channel subunit alpha-1D OS=Gallus
gallus GN=CACNA1D PE=2 SV=1
Length = 2190
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1482 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRI 1541
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1542 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTE--GNLEQAN 1599
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1600 EELRAVIKKIWKKTSMKLLDQVVP 1623
>sp|Q99246|CAC1D_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1D OS=Mus
musculus GN=Cacna1d PE=1 SV=3
Length = 2179
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1473 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRI 1532
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1533 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTE--GNLEQAN 1590
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1591 EELRAVIKKIWKKTSMKLLDQVVP 1614
>sp|Q24270|CAC1D_DROME Voltage-dependent calcium channel type D subunit alpha-1
OS=Drosophila melanogaster GN=Ca-alpha1D PE=1 SV=2
Length = 2516
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 108/144 (75%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF+R+W+EYDP+A G+I + + V +LR I
Sbjct: 1915 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI 1974
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FA++R +LSIK +D A+
Sbjct: 1975 SPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRTSLSIKTD--GNIDDAN 2032
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
ELR TI+ IW + K+L+ ++P
Sbjct: 2033 SELRATIKQIWKRTNPKLLDQVVP 2056
>sp|Q01668|CAC1D_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1D OS=Homo
sapiens GN=CACNA1D PE=1 SV=2
Length = 2161
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1453 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRI 1512
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1513 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTE--GNLEQAN 1570
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1571 EELRAVIKKIWKKTSMKLLDQVVP 1594
>sp|P27732|CAC1D_RAT Voltage-dependent L-type calcium channel subunit alpha-1D OS=Rattus
norvegicus GN=Cacna1d PE=1 SV=2
Length = 2203
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 106/144 (73%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1497 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRI 1556
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK ++QA+
Sbjct: 1557 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTE--GNLEQAN 1614
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1615 EELRAVIKKIWKKTSMKLLDQVVP 1638
>sp|P22316|CAC1S_CYPCA Dihydropyridine-sensitive L-type skeletal muscle calcium channel
subunit alpha-1 OS=Cyprinus carpio PE=2 SV=1
Length = 1852
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVA+IMDN DYLTRD SILG HHLDEF +IWAEYDP ATG+I + + V +LR I
Sbjct: 1391 FLIINLFVAIIMDNVDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLDVVTLLRRI 1450
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R A K+LI MNMPL+ D +V F T+FAL+R L IK +QA+
Sbjct: 1451 QPPLGFGKFCPHRSACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTE--GNFEQAN 1508
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+SIW S K+L+ ++P
Sbjct: 1509 EELRAIIKSIWKRTSMKLLDQVIP 1532
>sp|O60840|CAC1F_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1F OS=Homo
sapiens GN=CACNA1F PE=1 SV=2
Length = 1977
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1430 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRI 1489
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R +L IK ++QA+
Sbjct: 1490 QPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTSLKIKTE--GNLEQAN 1547
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
+ELR I+ IW +K+L+ ++P
Sbjct: 1548 QELRIVIKKIWKRMKQKLLDEVIP 1571
>sp|O00555|CAC1A_HUMAN Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Homo
sapiens GN=CACNA1A PE=1 SV=2
Length = 2505
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/149 (57%), Positives = 113/149 (75%), Gaps = 2/149 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDE+VR+WAEYDP A G++ Y + +MLR++
Sbjct: 1800 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMPYLDMYQMLRHM 1859
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G KCP R+A K+L+RM++P+ +D +V F +T+ ALIR L IK+ + + Q
Sbjct: 1860 SPPLGLGKKCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQM 1919
Query: 132 DEELRDTIRSIWPIESKKMLNLLL-PNKS 159
D ELR + +IWP S+K L+LL+ P+KS
Sbjct: 1920 DAELRKEMMAIWPNLSQKTLDLLVTPHKS 1948
>sp|Q9JIS7|CAC1F_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1F OS=Mus
musculus GN=Cacna1f PE=1 SV=1
Length = 1985
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIW+EYDP A G+I + + V +LR I
Sbjct: 1435 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPGAKGRIKHLDVVALLRRI 1494
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MN+PL+ D +V F T+FAL+R +L IK +DQA+
Sbjct: 1495 QPPLGFGKLCPHRVACKRLVAMNVPLNSDGTVTFNATLFALVRTSLKIKTE--GNLDQAN 1552
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
+ELR I+ IW +K+L+ ++P
Sbjct: 1553 QELRMVIKKIWKRIKQKLLDEVIP 1576
>sp|O57483|CAC1S_LITCT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Lithobates catesbeiana PE=2 SV=1
Length = 1688
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF RIWAEYDP A G+I + + V +LR I
Sbjct: 1357 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRI 1416
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+F+L+R L IK +Q++
Sbjct: 1417 QPPLGFGKFCPHRVACKRLVSMNMPLNSDGTVTFNATLFSLVRTALKIKTE--GNFEQSN 1474
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1475 EELRMIIKKIWKRTSMKLLDQVIP 1498
>sp|P07293|CAC1S_RABIT Voltage-dependent L-type calcium channel subunit alpha-1S
OS=Oryctolagus cuniculus GN=CACNA1S PE=1 SV=1
Length = 1873
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF IWAEYDP A G+I + + V +LR I
Sbjct: 1370 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRI 1429
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK +QA+
Sbjct: 1430 QPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTE--GNFEQAN 1487
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1488 EELRAIIKKIWKRTSMKLLDQVIP 1511
>sp|Q13698|CAC1S_HUMAN Voltage-dependent L-type calcium channel subunit alpha-1S OS=Homo
sapiens GN=CACNA1S PE=1 SV=4
Length = 1873
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF IWAEYDP A G+I + + V +LR I
Sbjct: 1370 FLVINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRI 1429
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK +QA+
Sbjct: 1430 QPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTE--GNFEQAN 1487
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1488 EELRAIIKKIWKRTSMKLLDQVIP 1511
>sp|Q02789|CAC1S_MOUSE Voltage-dependent L-type calcium channel subunit alpha-1S OS=Mus
musculus GN=Cacna1s PE=1 SV=2
Length = 1880
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF IWAEYDP A G+I + + V +LR I
Sbjct: 1370 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRI 1429
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK +QA+
Sbjct: 1430 QPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTE--GNFEQAN 1487
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 1488 EELRAIIKKIWKRTSMKLLDQVIP 1511
>sp|Q02485|CAC1S_RAT Voltage-dependent L-type calcium channel subunit alpha-1S
(Fragment) OS=Rattus norvegicus GN=Cacna1s PE=1 SV=1
Length = 1146
Score = 176 bits (445), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 104/144 (72%), Gaps = 2/144 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF IWAEYDP A G+I + + V +LR I
Sbjct: 657 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKAIWAEYDPEAKGRIKHLDVVTLLRRI 716
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
+PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FAL+R L IK +QA+
Sbjct: 717 QPPLGFGKFCPHRVACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTE--GNFEQAN 774
Query: 133 EELRDTIRSIWPIESKKMLNLLLP 156
EELR I+ IW S K+L+ ++P
Sbjct: 775 EELRAIIKKIWKRTSMKLLDQVIP 798
>sp|P27884|CAC1A_RABIT Voltage-dependent P/Q-type calcium channel subunit alpha-1A
OS=Oryctolagus cuniculus GN=CACNA1A PE=1 SV=1
Length = 2424
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 112/149 (75%), Gaps = 2/149 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
LMLNLFVAVIMDNF+YLTRDSSILG HHLDE+VR+WAEYDP A G++ Y++ MLR++
Sbjct: 1809 FLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMLYRDMYAMLRHM 1868
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKM-RCADEMDQA 131
PPLG G CP R+A K+L+RM++P+ +D +V F +T+ ALIR L IK+ + + Q
Sbjct: 1869 PPPLGLGKNCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQM 1928
Query: 132 DEELRDTIRSIWPIESKKMLNLLL-PNKS 159
D ELR + +IWP S+K L+LL+ P+KS
Sbjct: 1929 DAELRKEMMAIWPNLSQKTLDLLVTPHKS 1957
>sp|Q25452|CAC1M_MUSDO Muscle calcium channel subunit alpha-1 OS=Musca domestica PE=2 SV=1
Length = 1687
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 105/140 (75%), Gaps = 2/140 (1%)
Query: 13 MLMLNLFVAVIMDNFDYLTRDSSILGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLRNI 72
L++NLFVAVIMDNFDYLTRD SILG HHLDEF+R+W+EYDP+A G+I + + V +LR I
Sbjct: 1356 FLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFIRLWSEYDPDAKGRIKHLDVVTLLRKI 1415
Query: 73 EPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQAD 132
PPLGFG CP R+A K+L+ MNMPL+ D +V F T+FA++R L+IK +D+A+
Sbjct: 1416 SPPLGFGKLCPHRMACKRLVSMNMPLNSDGTVLFNATLFAVVRLPLAIKTD--GNIDEAN 1473
Query: 133 EELRDTIRSIWPIESKKMLN 152
ELR TI+ IW + ++L+
Sbjct: 1474 AELRATIKQIWKRTNPRLLD 1493
>sp|Q9W0Y8|SCN60_DROME Sodium channel protein 60E OS=Drosophila melanogaster GN=NaCP60E PE=2
SV=5
Length = 2821
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 5 TGEALANIMLMLNLFVAVIMDNFDYLTRDSSI-LGAHHLDEFVRIWAEYDPNATGKIHYK 63
T + + M+++N+++A+I++NF+ ++ I + L+ F W++YDP+AT IH+
Sbjct: 2267 TSFIIISYMIVINMYIAIILENFNQAHQEEEIGIVEDDLEMFYIRWSKYDPHATQFIHFS 2326
Query: 64 EAVEMLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMR 123
+ + + +++PPLG P+ +A L+ N+P+ + + + AL++ L +
Sbjct: 2327 QLSDFIASLDPPLGISK--PNNVA---LVSFNLPISKGNKIHCLDILHALVKHVLG-HVE 2380
Query: 124 CADEMDQADEELRDTIRSIWP 144
D Q E++ + +P
Sbjct: 2381 ETDNFKQLQEQMDVKFKKQFP 2401
>sp|P35499|SCN4A_HUMAN Sodium channel protein type 4 subunit alpha OS=Homo sapiens GN=SCN4A
PE=1 SV=4
Length = 1836
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++A+I++NF+ T +SS LG + F W ++DP+AT I Y +
Sbjct: 1583 IISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDPDATQFIAYSRLSD 1642
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
+ ++ PL P+++ KLI +++P+ + +FAL +E L
Sbjct: 1643 FVDTLQEPLRIAK--PNKI---KLITLDLPMVPGDKIHCLDILFALTKEVLG 1689
>sp|P15390|SCN4A_RAT Sodium channel protein type 4 subunit alpha OS=Rattus norvegicus
GN=Scn4a PE=2 SV=1
Length = 1840
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++A+I++NF+ T +SS L + F W ++DP+AT I Y +
Sbjct: 1576 IISFLIVVNMYIAIILENFNVATEESSEPLSEDDFEMFYETWEKFDPDATQFIDYSRLSD 1635
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
+ ++ PL P+++ KLI +++P+ + +FAL +E L
Sbjct: 1636 FVDTLQEPLKIAK--PNKI---KLITLDLPMVPGDKIHCLDILFALTKEVLG 1682
>sp|Q9ER60|SCN4A_MOUSE Sodium channel protein type 4 subunit alpha OS=Mus musculus GN=Scn4a
PE=2 SV=1
Length = 1841
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++A+I++NF+ T +SS L + F W ++DP+AT I Y +
Sbjct: 1577 IISFLIVVNMYIAIILENFNVATEESSEPLCEDDFEMFYETWEKFDPDATQFIDYSRLSD 1636
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
+ ++ PL P+++ KLI +++P+ + +FAL +E L
Sbjct: 1637 FVDTLQEPLKIAK--PNKI---KLITLDLPMVPGDKIHCLDILFALTKEVLG 1683
>sp|Q28644|SCN9A_RABIT Sodium channel protein type 9 subunit alpha OS=Oryctolagus cuniculus
GN=SCN9A PE=2 SV=1
Length = 1984
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I Y + +
Sbjct: 1742 IISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSD 1801
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
++PPL P+++ +LI M++P+ + +FA + L + E
Sbjct: 1802 FAAALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLGE----SGE 1852
Query: 128 MDQADEELRDTIRSIWP 144
MD ++ + S P
Sbjct: 1853 MDSLRSQMEERFMSANP 1869
>sp|Q28371|SCN4A_HORSE Sodium channel protein type 4 subunit alpha OS=Equus caballus
GN=SCN4A PE=1 SV=1
Length = 1834
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++A+I++NF+ T +SS LG + F W ++ P+AT I Y +
Sbjct: 1580 IISFLIVVNMYIAIILENFNVATEESSDPLGEDDFEIFFEKWEKFGPDATQFIDYSRLSD 1639
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
+ ++ PL P+++ KLI +++P+ + +FAL +E L + E
Sbjct: 1640 FVDTLQEPLRIAK--PNKI---KLITLDLPMVPGDKIHCLDILFALTKEVLGD----SGE 1690
Query: 128 MDQADEELRD 137
MD E + +
Sbjct: 1691 MDALKETMEE 1700
>sp|P04774|SCN1A_RAT Sodium channel protein type 1 subunit alpha OS=Rattus norvegicus
GN=Scn1a PE=2 SV=1
Length = 2009
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT + +++ +
Sbjct: 1771 IISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSQ 1830
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
+EPPL P++L +LI M++P+ + +FA + L
Sbjct: 1831 FAAALEPPLNLPQ--PNKL---QLIAMDLPMVSGDRIHCLDILFAFTKRVLG 1877
>sp|P35498|SCN1A_HUMAN Sodium channel protein type 1 subunit alpha OS=Homo sapiens GN=SCN1A
PE=1 SV=2
Length = 2009
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT + +++ +
Sbjct: 1771 IISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFMEFEKLSQ 1830
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
+EPPL P++L +LI M++P+ + +FA + L
Sbjct: 1831 FAAALEPPLNLPQ--PNKL---QLIAMDLPMVSGDRIHCLDILFAFTKRVLG 1877
>sp|Q15858|SCN9A_HUMAN Sodium channel protein type 9 subunit alpha OS=Homo sapiens GN=SCN9A
PE=1 SV=3
Length = 1988
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I + + +
Sbjct: 1745 IISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSD 1804
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
++PPL P+++ +LI M++P+ + +FA + L + E
Sbjct: 1805 FAAALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLGE----SGE 1855
Query: 128 MDQADEELRDTIRSIWP 144
MD ++ + S P
Sbjct: 1856 MDSLRSQMEERFMSANP 1872
>sp|Q62205|SCN9A_MOUSE Sodium channel protein type 9 subunit alpha OS=Mus musculus GN=Scn9a
PE=1 SV=2
Length = 1984
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I + + +
Sbjct: 1743 IISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLSD 1802
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
++PPL P+++ +LI M++P+ + +FA + L + E
Sbjct: 1803 FAAALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLGE----SGE 1853
Query: 128 MDQADEELRDTIRSIWP 144
MD ++ + S P
Sbjct: 1854 MDSLRSQMEERFMSANP 1870
>sp|Q9NY46|SCN3A_HUMAN Sodium channel protein type 3 subunit alpha OS=Homo sapiens GN=SCN3A
PE=1 SV=2
Length = 2000
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I + + +
Sbjct: 1756 IISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFSKLSD 1815
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
++PPL P+++ +LI M++P+ + +FA + L
Sbjct: 1816 FAAALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLG 1862
>sp|O08562|SCN9A_RAT Sodium channel protein type 9 subunit alpha OS=Rattus norvegicus
GN=Scn9a PE=1 SV=1
Length = 1984
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I + + +
Sbjct: 1743 IISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLSD 1802
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
++PPL P+++ +LI M++P+ + +FA + L E
Sbjct: 1803 FAAALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLGE----GGE 1853
Query: 128 MDQADEELRDTIRSIWP 144
MD ++ + S P
Sbjct: 1854 MDSLRSQMEERFMSANP 1870
>sp|Q05973|SCN1_LOLBL Sodium channel protein 1 brain OS=Loligo bleekeri PE=2 SV=1
Length = 1522
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 12 IMLMLNLFVAVIMDNFDYLTRDSSI-LGAHHLDEFVRIWAEYDPNATGKIHYKEAVEMLR 70
M++ N+++AVI++NF+ + + LD F +W +YDP AT I +++ + ++
Sbjct: 1339 FMIVFNMYIAVILENFNQAHAQEEVGITEDDLDMFYGVWEQYDPLATQFIKHEQLSDFIQ 1398
Query: 71 NIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADEMDQ 130
+++PPL K P+ +A + ++P+ + + + AL++ L + + +
Sbjct: 1399 DLDPPL--KVKKPNNVA---IATFDLPIVKGGHIHCLDILLALVKFALGGNLEETEAFKR 1453
Query: 131 ADEELRDTIRSIWPIESK 148
++ I+P K
Sbjct: 1454 VRTQMEARFDEIFPTREK 1471
>sp|Q99250|SCN2A_HUMAN Sodium channel protein type 2 subunit alpha OS=Homo sapiens GN=SCN2A
PE=1 SV=3
Length = 2005
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++AVI++NF T +S+ L + F +W ++DP+AT I + + +
Sbjct: 1761 IISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEFAKLSD 1820
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLS 119
++PPL P+++ +LI M++P+ + +FA + L
Sbjct: 1821 FADALDPPLLIAK--PNKV---QLIAMDLPMVSGDRIHCLDILFAFTKRVLG 1867
>sp|Q2XVR4|SC4AB_TETNG Sodium channel protein type 4 subunit alpha B OS=Tetraodon
nigroviridis GN=scn4ab PE=3 SV=1
Length = 1715
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Query: 9 LANIMLMLNLFVAVIMDNFDYLTRDSS-ILGAHHLDEFVRIWAEYDPNATGKIHYKEAVE 67
+ + ++++N+++A+I++NF+ T +SS L D F W ++DP+AT I Y + +
Sbjct: 1467 IMSFLVVVNMYIAIILENFNVATEESSDPLCEDDFDMFYETWEKFDPDATQFIQYSKLSD 1526
Query: 68 MLRNIEPPLGFGSKCPDRLAAKKLIRMNMPLDEDQSVQFTTTMFALIRENLSIKMRCADE 127
++ PL P+ + KLI +++PL + + AL E L +DE
Sbjct: 1527 FCDTLKEPLRIPK--PNTI---KLISLDLPLVPGDKIHCMDILLALTAEVLGD----SDE 1577
Query: 128 MD 129
MD
Sbjct: 1578 MD 1579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,219,219
Number of Sequences: 539616
Number of extensions: 2107236
Number of successful extensions: 5425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 5198
Number of HSP's gapped (non-prelim): 199
length of query: 161
length of database: 191,569,459
effective HSP length: 108
effective length of query: 53
effective length of database: 133,290,931
effective search space: 7064419343
effective search space used: 7064419343
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)