BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13318
(100 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328700227|ref|XP_001951393.2| PREDICTED: ELAV-like protein 4-like isoform 1 [Acyrthosiphon
pisum]
Length = 383
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 63/73 (86%), Gaps = 4/73 (5%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPS-NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
MD++P NGS+H SS NSH ASQ S NEESKTNLIVNYLPQTMTQEE++SLFSS+GEV
Sbjct: 6 MDSLPH-NGSIHTSSTNSH--ASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEV 62
Query: 60 ESCKLIRDKTTGE 72
ESCKLIRDK TG+
Sbjct: 63 ESCKLIRDKVTGQ 75
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T
Sbjct: 114 PSSEAIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMT 159
>gi|328700229|ref|XP_003241188.1| PREDICTED: ELAV-like protein 4-like isoform 2 [Acyrthosiphon
pisum]
Length = 392
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 63/73 (86%), Gaps = 4/73 (5%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPS-NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
MD++P NGS+H SS NSH ASQ S NEESKTNLIVNYLPQTMTQEE++SLFSS+GEV
Sbjct: 6 MDSLPH-NGSIHTSSTNSH--ASQGNSLNEESKTNLIVNYLPQTMTQEEIRSLFSSIGEV 62
Query: 60 ESCKLIRDKTTGE 72
ESCKLIRDK TG+
Sbjct: 63 ESCKLIRDKVTGQ 75
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T
Sbjct: 114 PSSEAIKGANLYVSGLPKHMTQQDLENLFSPYGRIITSRILCDNMT 159
>gi|241608251|ref|XP_002406561.1| RNA binding protein ELAV, putative [Ixodes scapularis]
gi|215502675|gb|EEC12169.1| RNA binding protein ELAV, putative [Ixodes scapularis]
Length = 84
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 55/66 (83%), Gaps = 7/66 (10%)
Query: 6 QQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
QQNG+LHNS V + SA E+SKTNLIVNYLPQTMTQEE++SLFSS+GEVESCKLI
Sbjct: 13 QQNGTLHNS-VQTGTSA------EDSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLI 65
Query: 66 RDKTTG 71
RDK TG
Sbjct: 66 RDKVTG 71
>gi|242005325|ref|XP_002423520.1| protein elav, putative [Pediculus humanus corporis]
gi|212506634|gb|EEB10782.1| protein elav, putative [Pediculus humanus corporis]
Length = 373
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 62/71 (87%), Gaps = 3/71 (4%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSAS---QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVG 57
MD++PQQNG+LH +S +S NS + QT + EESKTNLIVNYLPQTMTQEE++SLFSS+G
Sbjct: 6 MDSVPQQNGALHTNSSSSTNSHNSSSQTTAPEESKTNLIVNYLPQTMTQEEIRSLFSSIG 65
Query: 58 EVESCKLIRDK 68
EVESCKLIRDK
Sbjct: 66 EVESCKLIRDK 76
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ++++SLFS G + + +++ D TG
Sbjct: 143 PSSESIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITG 189
>gi|259013331|ref|NP_001158376.1| Hu/elav protein [Saccoglossus kowalevskii]
gi|32307761|gb|AAP79277.1| Hu/elav [Saccoglossus kowalevskii]
Length = 357
Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 53/70 (75%), Gaps = 6/70 (8%)
Query: 2 DAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
DA+ QQNG + N N + E+SKTNLI+NYLPQTMTQEE+KSLFSS+GE+ES
Sbjct: 12 DAVMQQNGIMRN------NGGTSPLIPEDSKTNLIINYLPQTMTQEEIKSLFSSIGEIES 65
Query: 62 CKLIRDKTTG 71
CKLIRDK TG
Sbjct: 66 CKLIRDKVTG 75
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL V LP+TM Q++++ +F+S G + + +++ D TG
Sbjct: 130 PSSQAIKDANLYVCGLPKTMAQKDLEEMFTSCGRIITSRILCDSVTG 176
>gi|391344304|ref|XP_003746441.1| PREDICTED: ELAV-like protein 4-like [Metaseiulus occidentalis]
Length = 394
Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 8/68 (11%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
PQ NG H+ + Q + E+SKTNLIVNYLPQTMTQEE++SLFSS+GEVESCKL
Sbjct: 47 PQTNGL--------HSPSQQAGAGEDSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKL 98
Query: 65 IRDKTTGE 72
IRDK TG+
Sbjct: 99 IRDKVTGQ 106
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
PS+E K NL V+ LP++MTQ++++ LF+ G + + +++ D T LS
Sbjct: 145 PSSEAIKGANLYVSGLPKSMTQQDLEQLFAPYGGIITSRILCDNITAGLS 194
>gi|345493621|ref|XP_003427111.1| PREDICTED: ELAV-like protein 3-like isoform 3 [Nasonia
vitripennis]
gi|345493623|ref|XP_001603257.2| PREDICTED: ELAV-like protein 3-like isoform 1 [Nasonia
vitripennis]
Length = 349
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 52/72 (72%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG S S EESKTNLIVNYLPQTMTQEE++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG----------SNLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNIT 151
>gi|345493619|ref|XP_003427110.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Nasonia
vitripennis]
Length = 383
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/72 (65%), Positives = 52/72 (72%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG S S EESKTNLIVNYLPQTMTQEE++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG----------SNLGQSSQEESKTNLIVNYLPQTMTQEEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNIT 151
>gi|38047677|gb|AAR09741.1| similar to Drosophila melanogaster fne, partial [Drosophila
yakuba]
Length = 166
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVV 76
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +G L +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLP 69
Query: 77 A 77
A
Sbjct: 70 A 70
>gi|383865034|ref|XP_003707981.1| PREDICTED: ELAV-like protein 2-like [Megachile rotundata]
Length = 502
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ ASQ EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG------STLGQASQ----EESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T V + P
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPG 165
Query: 85 L 85
L
Sbjct: 166 L 166
>gi|18860091|ref|NP_572842.1| found in neurons, isoform A [Drosophila melanogaster]
gi|161077787|ref|NP_001096965.1| found in neurons, isoform B [Drosophila melanogaster]
gi|386764326|ref|NP_001245646.1| found in neurons, isoform C [Drosophila melanogaster]
gi|386764332|ref|NP_001245648.1| found in neurons, isoform E [Drosophila melanogaster]
gi|386764334|ref|NP_001245649.1| found in neurons, isoform F [Drosophila melanogaster]
gi|442616163|ref|NP_001259497.1| found in neurons, isoform G [Drosophila melanogaster]
gi|442616165|ref|NP_001259498.1| found in neurons, isoform H [Drosophila melanogaster]
gi|7230770|gb|AAF43091.1|AF239667_1 putative RNA binding protein [Drosophila melanogaster]
gi|22833123|gb|AAF48215.3| found in neurons, isoform A [Drosophila melanogaster]
gi|158031803|gb|ABW09403.1| found in neurons, isoform B [Drosophila melanogaster]
gi|289666819|gb|ADD16464.1| RT06063p1 [Drosophila melanogaster]
gi|383293359|gb|AFH07360.1| found in neurons, isoform C [Drosophila melanogaster]
gi|383293361|gb|AFH07362.1| found in neurons, isoform E [Drosophila melanogaster]
gi|383293362|gb|AFH07363.1| found in neurons, isoform F [Drosophila melanogaster]
gi|440216716|gb|AGB95339.1| found in neurons, isoform G [Drosophila melanogaster]
gi|440216717|gb|AGB95340.1| found in neurons, isoform H [Drosophila melanogaster]
Length = 356
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 50/61 (81%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVV 76
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +G L +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLP 69
Query: 77 A 77
A
Sbjct: 70 A 70
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 122 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 168
>gi|380027075|ref|XP_003697261.1| PREDICTED: ELAV-like protein 2-like [Apis florea]
Length = 362
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ ASQ EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG------STLGQASQ----EESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T V + P
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPG 165
Query: 85 L 85
L
Sbjct: 166 L 166
>gi|389612935|dbj|BAM19862.1| RNA-binding protein [Papilio xuthus]
Length = 360
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 45/53 (84%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ N + P N ESKTNLIVNYLPQTMTQEE++SLFSSVGEVESCKLIRDK T
Sbjct: 14 TQNGSKLQPCNNESKTNLIVNYLPQTMTQEEIRSLFSSVGEVESCKLIRDKVT 66
>gi|47225636|emb|CAG07979.1| unnamed protein product [Tetraodon nigroviridis]
Length = 382
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 13/102 (12%)
Query: 5 PQQNGSLHNS-SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
P G+ N + NSH S QT P+N++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 13 PSGGGTTANGPTTNSHGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 72
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 73 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 114
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 132 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 169
>gi|328792242|ref|XP_394166.4| PREDICTED: ELAV-like protein 2-like [Apis mellifera]
Length = 378
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ ASQ EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG------STLGQASQ----EESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ MTQ+++++LFS G + + +++ D T V + PE
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFSPYGRIITSRILCDNITVRQFVTGGGDYLPE 165
>gi|143346991|gb|ABO93208.1| Elav [Platynereis dumerilii]
Length = 361
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 8/65 (12%)
Query: 6 QQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
QQNG ++S V +P E+SKTNLIVNYLPQTMTQEE++SLFSS+GEVESCKLI
Sbjct: 23 QQNGGSNHSPV--------SPGAEDSKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLI 74
Query: 66 RDKTT 70
RDK T
Sbjct: 75 RDKAT 79
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++M++ E++SLFSS G + +C+++ D TTG
Sbjct: 128 PSSESIKGANLYLSGLPKSMSEPELRSLFSSCGSIINCRILCDNTTG 174
>gi|350425139|ref|XP_003494024.1| PREDICTED: ELAV-like protein 2-like [Bombus impatiens]
Length = 371
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ ASQ EESKTNLIVNYLPQ+MTQ+E++SLF+S+GEVE
Sbjct: 6 MDTVVQQNGG------STLGQASQ----EESKTNLIVNYLPQSMTQDEIRSLFASIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ MTQ+++++LF+ G + + +++ D T V + P
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPG 165
Query: 85 L 85
L
Sbjct: 166 L 166
>gi|340709266|ref|XP_003393232.1| PREDICTED: ELAV-like protein 2-like [Bombus terrestris]
Length = 533
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ ASQ EESKTNLIVNYLPQ+MTQ+E++SLF+S+GEVE
Sbjct: 6 MDTVVQQNGG------STLGQASQ----EESKTNLIVNYLPQSMTQDEIRSLFASIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK TG+
Sbjct: 56 SCKLIRDKLTGQ 67
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ MTQ+++++LF+ G + + +++ D T V + P
Sbjct: 106 PSSEAIKGANLYVSGLPKNMTQQDLENLFNPYGRIITSRILCDNITVRQFVTGGGDYLPG 165
Query: 85 L 85
L
Sbjct: 166 L 166
>gi|195566472|ref|XP_002106804.1| GD17091 [Drosophila simulans]
gi|194204196|gb|EDX17772.1| GD17091 [Drosophila simulans]
Length = 371
Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 46/51 (90%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK T L + A
Sbjct: 20 SNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVTRNLVLPA 70
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 122 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 168
>gi|363744745|ref|XP_003643117.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gallus gallus]
Length = 366
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 5 PQQNGSLHNS-SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P N + H S ++N+ +S + + E+SKTNLIVNYLPQ+MTQEE+KSLF S+GE+ESCK
Sbjct: 17 PTCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCK 76
Query: 64 LIRDKTTGE 72
L+RDK TG+
Sbjct: 77 LVRDKITGQ 85
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|157114005|ref|XP_001657938.1| RNA-binding protein, putative [Aedes aegypti]
gi|108877490|gb|EAT41715.1| AAEL006675-PA, partial [Aedes aegypti]
Length = 359
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 48/59 (81%), Gaps = 4/59 (6%)
Query: 14 SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ N N SQ E+SKTNLIVNYLPQ MTQEE++SLFSS+GEVESCKLIRDK TGE
Sbjct: 13 SADNQQNGGSQ----EDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGE 67
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q +++SLFS G + + +++ D TG
Sbjct: 123 PSSEAIKGANLYVSGLPKNMLQADLESLFSPYGRIITSRILCDNITG 169
>gi|307194503|gb|EFN76795.1| ELAV-like protein 2 [Harpegnathos saltator]
Length = 349
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ QT S EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 5 MDTVVQQNGG---------STLGQT-SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 54
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK +G+
Sbjct: 55 SCKLIRDKLSGQ 66
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q+++++LFS G + + +++ D TG
Sbjct: 105 PSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITG 151
>gi|332029758|gb|EGI69627.1| ELAV-like protein 2 [Acromyrmex echinatior]
Length = 359
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ QT S EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG---------STLGQT-SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK +G+
Sbjct: 56 SCKLIRDKLSGQ 67
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q+++++LFS G + + +++ D TG
Sbjct: 106 PSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITG 152
>gi|260821286|ref|XP_002605964.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
gi|229291301|gb|EEN61974.1| hypothetical protein BRAFLDRAFT_92208 [Branchiostoma floridae]
Length = 330
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 44/46 (95%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S E+SKTNLIVNYLPQTMTQ+E+KSLFSS+GEVESCKLIRDK TG+
Sbjct: 21 STEDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQ 66
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS++ K NL V+ LP+TMTQ++++ LF + G + + +++ D TG+
Sbjct: 105 PSSQAIKDANLYVSGLPKTMTQQDLEGLFEAHGRIITSRILFDPVTGQ 152
>gi|363744747|ref|XP_001233484.2| PREDICTED: ELAV-like protein 2 isoform 1 [Gallus gallus]
Length = 345
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 5 PQQNGSLHNS-SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P N + H S ++N+ +S + + E+SKTNLIVNYLPQ+MTQEE+KSLF S+GE+ESCK
Sbjct: 9 PTCNNTAHGSNAINNCSSPIDSGNTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCK 68
Query: 64 LIRDKTTGE 72
L+RDK TG+
Sbjct: 69 LVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 162
>gi|307168947|gb|EFN61833.1| ELAV-like protein 4 [Camponotus floridanus]
Length = 466
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ QT S EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 6 MDTVVQQNGG---------STLGQT-SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 55
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK +G+
Sbjct: 56 SCKLIRDKLSGQ 67
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL V+ LP+ M Q+++++LFS G + + +++ D T
Sbjct: 106 PSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNIT 151
>gi|410921400|ref|XP_003974171.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 4-like [Takifugu
rubripes]
Length = 414
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 13/102 (12%)
Query: 5 PQQNGSLHNS-SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
P G+ N + N+H S QT P+N++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 50 PSGGGTTANGPTTNNHGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 109
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 110 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 151
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 169 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 206
>gi|449266192|gb|EMC77278.1| ELAV-like protein 2 [Columba livia]
Length = 388
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 5 PQQNGSLHNS-SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P N + H+S ++N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCK
Sbjct: 38 PTCNNTAHSSNTINNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 97
Query: 64 LIRDKTTGE 72
L+RDK TG+
Sbjct: 98 LVRDKITGQ 106
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|322798581|gb|EFZ20185.1| hypothetical protein SINV_01390 [Solenopsis invicta]
Length = 523
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 10/72 (13%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
MD + QQNG ++ QT S EESKTNLIVNYLPQ+MTQ+E++SLFSS+GEVE
Sbjct: 5 MDTVVQQNGG---------STLGQT-SQEESKTNLIVNYLPQSMTQDEIRSLFSSIGEVE 54
Query: 61 SCKLIRDKTTGE 72
SCKLIRDK +G+
Sbjct: 55 SCKLIRDKLSGQ 66
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q+++++LFS G + + +++ D TG
Sbjct: 105 PSSEAIKGANLYVSGLPKNMAQQDLENLFSPYGRIITSRILCDNITG 151
>gi|327264130|ref|XP_003216869.1| PREDICTED: ELAV-like protein 3-like [Anolis carolinensis]
Length = 386
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 50/68 (73%), Gaps = 5/68 (7%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P N SL N + S N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL
Sbjct: 42 PTSNSSLPNGPLISANGAT-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKL 96
Query: 65 IRDKTTGE 72
+RDK TG+
Sbjct: 97 VRDKITGQ 104
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ T +S
Sbjct: 152 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTAGVS 192
>gi|189233813|ref|XP_971256.2| PREDICTED: similar to RNA-binding protein, putative [Tribolium
castaneum]
Length = 352
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/43 (90%), Positives = 42/43 (97%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
EESKTNLIVNYLPQTMTQEE++SLFSS+GEVESCKLIRDK TG
Sbjct: 26 EESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVTG 68
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ++++SLFS G + + +++ D TG
Sbjct: 122 PSSEAIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITG 168
>gi|347964852|ref|XP_309157.5| AGAP000965-PA [Anopheles gambiae str. PEST]
gi|333466508|gb|EAA04954.5| AGAP000965-PA [Anopheles gambiae str. PEST]
Length = 340
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 45/52 (86%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S E+SKTNLIVNYLPQTMTQEE+KSLFSS+G+VESCKLIRDK TG+
Sbjct: 15 SGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVTGQ 66
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL V+ L ++MTQ+++++LF++ G++ + +++ D TG
Sbjct: 105 PSSDAIKGANLYVSGLSKSMTQQDLENLFNAYGQIITSRILCDNITG 151
>gi|348504313|ref|XP_003439706.1| PREDICTED: ELAV-like protein 4-like [Oreochromis niloticus]
Length = 476
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 13/102 (12%)
Query: 5 PQQNGSLHNSSVNSHN---SASQT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
P G+ N N+ S QT P+N++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 124 PSGGGTTANGPTNNSRGCPSPMQTGPTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 183
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 184 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 225
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 243 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 280
>gi|449514035|ref|XP_002190678.2| PREDICTED: ELAV-like protein 2-like [Taeniopygia guttata]
Length = 380
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 5 PQQNGSLHNSS-VNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P N + H S+ +N+ S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCK
Sbjct: 38 PTCNNTAHGSATINNCPSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 97
Query: 64 LIRDKTTG 71
L+RDK TG
Sbjct: 98 LVRDKITG 105
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQTELEQLFSQYGHIITSRILVDQVTG 191
>gi|432856226|ref|XP_004068415.1| PREDICTED: ELAV-like protein 4-like [Oryzias latipes]
Length = 439
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 54/77 (70%), Gaps = 9/77 (11%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE 84
P+N++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 111 PTNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPK 170
Query: 85 --------LNGLHSQTE 93
LNGL QT+
Sbjct: 171 DAEKAINTLNGLRLQTK 187
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 205 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 242
>gi|157126547|ref|XP_001660922.1| hypothetical protein AaeL_AAEL010567 [Aedes aegypti]
gi|108873228|gb|EAT37453.1| AAEL010567-PA, partial [Aedes aegypti]
Length = 384
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/69 (63%), Positives = 49/69 (71%), Gaps = 10/69 (14%)
Query: 6 QQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
QQNG S S E+SKTNLIVNYLPQTMTQEE+KSLFSS+G+VESCKLI
Sbjct: 40 QQNG----------RSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLI 89
Query: 66 RDKTTGELS 74
RDK TG +
Sbjct: 90 RDKVTGNWT 98
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL V+ L ++MTQ+++++LF G++ + +++ D TG
Sbjct: 149 PSSDAIKGANLYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITG 195
>gi|89266927|emb|CAJ82281.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Xenopus (Silurana) tropicalis]
Length = 374
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
++N+ +S ++ + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 49 TINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 108
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 109 GYGFVNYIDPKDAEKAINTLNGLRLQTK 136
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|349732184|ref|NP_001025498.3| ELAV-like protein 2 [Xenopus (Silurana) tropicalis]
gi|288561906|sp|Q28GD4.2|ELAV2_XENTR RecName: Full=ELAV-like protein 2; AltName: Full=Protein ElrB
Length = 375
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
++N+ +S ++ + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 49 TINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 108
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 109 GYGFVNYIDPKDAEKAINTLNGLRLQTK 136
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|270014670|gb|EFA11118.1| hypothetical protein TcasGA2_TC004718 [Tribolium castaneum]
Length = 350
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/59 (72%), Positives = 47/59 (79%), Gaps = 5/59 (8%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELNG 87
EESKTNLIVNYLPQTMTQEE++SLFSS+GEVESCKLIRDK T V I +P L G
Sbjct: 27 EESKTNLIVNYLPQTMTQEEIRSLFSSIGEVESCKLIRDKVT-----VPGVITSPLLTG 80
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ++++SLFS G + + +++ D TG
Sbjct: 120 PSSEAIKGANLYVSGLPKNMTQQDLESLFSPYGRIITSRILCDNITG 166
>gi|327271181|ref|XP_003220366.1| PREDICTED: ELAV-like protein 4-like [Anolis carolinensis]
Length = 410
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 58/88 (65%), Gaps = 11/88 (12%)
Query: 17 NSHNSAS--QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L
Sbjct: 72 NSRNCPSPMQTAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSL 131
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 132 GYGFVNYIDPKDAEKAINTLNGLRLQTK 159
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 177 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 214
>gi|117557982|gb|AAI27339.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus (Silurana) tropicalis]
Length = 346
Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 9/88 (10%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
++N+ +S ++ + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 20 TINNCSSPVESSNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 79
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 80 GYGFVNYIDPKDAEKAINTLNGLRLQTK 107
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 162
>gi|170028363|ref|XP_001842065.1| RNA-binding protein [Culex quinquefasciatus]
gi|167874220|gb|EDS37603.1| RNA-binding protein [Culex quinquefasciatus]
Length = 365
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/46 (82%), Positives = 43/46 (93%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S E+SKTNLIVNYLPQ MTQEE++SLFSS+GEVESCKLIRDK TG+
Sbjct: 38 SQEDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTGQ 83
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
PS+E K NL V+ LP+ M Q +++SLFS G + + +++ D T A+ +P
Sbjct: 122 PSSEAIKGANLYVSGLPKNMLQSDLESLFSPYGRIITSRILCDNITARQYASASGEVSPG 181
Query: 85 L 85
L
Sbjct: 182 L 182
>gi|195133062|ref|XP_002010958.1| GI16282 [Drosophila mojavensis]
gi|193906933|gb|EDW05800.1| GI16282 [Drosophila mojavensis]
Length = 353
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +
Sbjct: 10 NGSTNGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 119 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 165
>gi|213625406|gb|AAI70539.1| Xel-1 protein [Xenopus laevis]
Length = 388
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
N+ N +S SN E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 107
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 108 GYGFVNYIDPKDAEKAINTLNGLRLQTK 135
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 153 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 190
>gi|365812510|ref|NP_001002172.2| ELAV-like protein 2 [Danio rerio]
Length = 389
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 10/91 (10%)
Query: 13 NSSVNSHNSASQTP-SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NS N+ S + P +E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG
Sbjct: 47 NSVSNTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG 106
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 107 QSLGYGFVNYMEPKDAEKAINTLNGLRLQTK 137
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTG 192
>gi|18858615|ref|NP_571524.1| ELAV-like protein 3 [Danio rerio]
gi|1683635|gb|AAB36515.1| zHuC [Danio rerio]
Length = 345
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNGAT-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ ++ TG
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVNQVTG 162
>gi|40807107|gb|AAH65343.1| Elavl3 protein [Danio rerio]
Length = 359
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNGAT-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ T +S
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGIS 165
>gi|397521309|ref|XP_003830739.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan paniscus]
gi|397521311|ref|XP_003830740.1| PREDICTED: ELAV-like protein 2 isoform 3 [Pan paniscus]
gi|397521313|ref|XP_003830741.1| PREDICTED: ELAV-like protein 2 isoform 4 [Pan paniscus]
Length = 346
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
NS +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NSCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|62739311|gb|AAH94189.1| Elavl2-a protein [Xenopus laevis]
Length = 359
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/88 (54%), Positives = 59/88 (67%), Gaps = 11/88 (12%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-L 73
N+ N +S SN E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 19 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSL 78
Query: 74 SVVANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 79 GYGFVNYIDPKDAEKAINTLNGLRLQTK 106
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 124 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 161
>gi|397521307|ref|XP_003830738.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan paniscus]
Length = 359
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
NS +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NSCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|386764328|ref|NP_001245647.1| found in neurons, isoform D [Drosophila melanogaster]
gi|194895737|ref|XP_001978329.1| GG17743 [Drosophila erecta]
gi|195045911|ref|XP_001992055.1| GH24423 [Drosophila grimshawi]
gi|195397025|ref|XP_002057129.1| GJ16518 [Drosophila virilis]
gi|195447330|ref|XP_002071166.1| GK25647 [Drosophila willistoni]
gi|195478085|ref|XP_002100403.1| fne [Drosophila yakuba]
gi|190649978|gb|EDV47256.1| GG17743 [Drosophila erecta]
gi|193892896|gb|EDV91762.1| GH24423 [Drosophila grimshawi]
gi|194146896|gb|EDW62615.1| GJ16518 [Drosophila virilis]
gi|194167251|gb|EDW82152.1| GK25647 [Drosophila willistoni]
gi|194187927|gb|EDX01511.1| fne [Drosophila yakuba]
gi|307344716|gb|ADN43900.1| RT06051p [Drosophila melanogaster]
gi|383293360|gb|AFH07361.1| found in neurons, isoform D [Drosophila melanogaster]
Length = 353
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 119 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 165
>gi|198467583|ref|XP_002134579.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
gi|198149314|gb|EDY73206.1| GA22283 [Drosophila pseudoobscura pseudoobscura]
Length = 353
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 119 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 165
>gi|194764023|ref|XP_001964131.1| GF21392 [Drosophila ananassae]
gi|190619056|gb|EDV34580.1| GF21392 [Drosophila ananassae]
Length = 353
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 119 PSSESIKGANLYVSGLPKNLSQPDLEGMFASYGKIITSRILCDNISG 165
>gi|49119672|gb|AAH72716.1| Zgc:91918 [Danio rerio]
Length = 360
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 10/91 (10%)
Query: 13 NSSVNSHNSASQTP-SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NS N+ S + P +E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG
Sbjct: 18 NSVSNTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG 77
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 78 QSLGYGFVNYMEPKDAEKAINTLNGLRLQTK 108
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTG 163
>gi|198425950|ref|XP_002126161.1| PREDICTED: similar to ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D) [Ciona intestinalis]
Length = 564
Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 44/47 (93%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS +ESKTNLI+NYLPQ MTQE++++LFSS+GE+ESCKLIRDK TG+
Sbjct: 81 PSMDESKTNLIINYLPQAMTQEDLRNLFSSIGELESCKLIRDKLTGQ 127
>gi|432919034|ref|XP_004079712.1| PREDICTED: ELAV-like protein 2-like [Oryzias latipes]
Length = 389
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 54/70 (77%), Gaps = 2/70 (2%)
Query: 5 PQQNGSLHNSSVNSHNSAS--QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
P N + + S S+N +S ++ S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESC
Sbjct: 38 PTCNNTSNGPSTMSNNCSSPVESGSIEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 97
Query: 63 KLIRDKTTGE 72
KL+RDK TG+
Sbjct: 98 KLVRDKITGQ 107
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|348525751|ref|XP_003450385.1| PREDICTED: ELAV-like protein 2-like [Oreochromis niloticus]
Length = 440
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 59/86 (68%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S ++ S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 103 NNCSSPVESGSVEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 162
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 163 GFVNYVDPKDAEKAINTLNGLRLQTK 188
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 206 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 243
>gi|195352738|ref|XP_002042868.1| GM11591 [Drosophila sechellia]
gi|194126915|gb|EDW48958.1| GM11591 [Drosophila sechellia]
Length = 379
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%), Gaps = 4/65 (6%)
Query: 6 QQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
Q++G + N S N S SN+ES+TNLIV YLPQTMTQEEM+SLFSS+GE+ESCKL+
Sbjct: 29 QRHGHVKNGSAN----GSVDGSNDESRTNLIVIYLPQTMTQEEMRSLFSSIGELESCKLV 84
Query: 66 RDKTT 70
RDK +
Sbjct: 85 RDKVS 89
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 145 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 191
>gi|195173668|ref|XP_002027609.1| GL22975 [Drosophila persimilis]
gi|194114534|gb|EDW36577.1| GL22975 [Drosophila persimilis]
Length = 385
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 46/54 (85%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N + S SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +
Sbjct: 10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ ++Q +++ +F+S G++ + +++ D +G
Sbjct: 119 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISG 165
>gi|347446713|ref|NP_571528.2| ELAV-like protein 4 isoform 3 [Danio rerio]
Length = 403
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 74 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 133
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 134 AEKAINTLNGLRLQTK 149
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 167 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 204
>gi|347446711|ref|NP_001231530.1| ELAV-like protein 4 isoform 2 [Danio rerio]
Length = 398
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 69 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 128
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 129 AEKAINTLNGLRLQTK 144
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 162 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 199
>gi|608549|gb|AAA96940.1| ribonucleoprotein [Danio rerio]
gi|68085524|gb|AAH65965.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Danio rerio]
Length = 367
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 38 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 97
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 98 AEKAINTLNGLRLQTK 113
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 131 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 168
>gi|347446708|ref|NP_001231529.1| ELAV-like protein 4 isoform 1 [Danio rerio]
Length = 411
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 82 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 141
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 142 AEKAINTLNGLRLQTK 157
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 175 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 212
>gi|13898849|gb|AAK48899.1|AF357912_1 ribonucleoprotein [Labeo rohita]
Length = 179
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 55/83 (66%), Gaps = 9/83 (10%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 69 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 128
Query: 85 -------LNGLHSQTERSRKSMF 100
LNGL QT+ + F
Sbjct: 129 AEKAINTLNGLRLQTKTIKVEAF 151
>gi|395514482|ref|XP_003761446.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Sarcophilus
harrisii]
Length = 389
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 11/100 (11%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
P N + + + ++N +S S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESC
Sbjct: 38 PTCNNTANGPTTITNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 97
Query: 63 KLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
KL+RDK TG+ L + P+ LNGL QT+
Sbjct: 98 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 137
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|348509181|ref|XP_003442130.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oreochromis
niloticus]
gi|410902663|ref|XP_003964813.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Takifugu rubripes]
gi|432868072|ref|XP_004071397.1| PREDICTED: ELAV-like protein 3-like isoform 1 [Oryzias latipes]
Length = 345
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTG 162
>gi|18463972|gb|AAL73053.1| HUC [Sphoeroides nephelus]
Length = 356
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 18 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 72
Query: 70 TGE 72
TG+
Sbjct: 73 TGQ 75
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ TG
Sbjct: 123 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTG 160
>gi|432868074|ref|XP_004071398.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oryzias latipes]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTG 162
>gi|348509183|ref|XP_003442131.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Oreochromis
niloticus]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ T +S
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGIS 165
>gi|47220048|emb|CAG12196.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 18 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 72
Query: 70 TGE 72
TG+
Sbjct: 73 TGQ 75
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ TG
Sbjct: 123 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTG 160
>gi|410902665|ref|XP_003964814.1| PREDICTED: ELAV-like protein 3-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 47/63 (74%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL N V S N S ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 20 SLPNGPVISTNG-----STDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 74
Query: 70 TGE 72
TG+
Sbjct: 75 TGQ 77
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q++M+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTG 162
>gi|301763026|ref|XP_002916933.1| PREDICTED: ELAV-like protein 2-like [Ailuropoda melanoleuca]
Length = 427
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 91 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 150
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 151 GFVNYIDPKDAEKAINTLNGLRLQTK 176
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 194 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 231
>gi|327263683|ref|XP_003216647.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Anolis carolinensis]
Length = 397
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 61 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 120
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 121 GFVNYIDPKDAEKAINTLNGLRLQTK 146
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 164 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 201
>gi|281349018|gb|EFB24602.1| hypothetical protein PANDA_005072 [Ailuropoda melanoleuca]
gi|351703220|gb|EHB06139.1| ELAV-like protein 2 [Heterocephalus glaber]
gi|355567720|gb|EHH24061.1| Hu-antigen B [Macaca mulatta]
gi|355753294|gb|EHH57340.1| Hu-antigen B [Macaca fascicularis]
gi|431914785|gb|ELK15810.1| ELAV-like protein 2 [Pteropus alecto]
Length = 387
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 51 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 110
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 111 GFVNYIDPKDAEKAINTLNGLRLQTK 136
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|348041233|ref|NP_775431.2| ELAV-like protein 2 [Rattus norvegicus]
gi|149044491|gb|EDL97750.1| rCG53485, isoform CRA_b [Rattus norvegicus]
Length = 388
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 111
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 112 GFVNYIDPKDAEKAINTLNGLRLQTK 137
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|440909067|gb|ELR59018.1| ELAV-like protein 2 [Bos grunniens mutus]
Length = 388
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 51 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 110
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 111 GFVNYIDPKDAEKAINTLNGLRLQTK 136
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|119578990|gb|EAW58586.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_e [Homo sapiens]
Length = 374
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 37 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 96
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 97 GFVNYIDPKDAEKAINTLNGLRLQTK 122
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 140 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 177
>gi|207080284|ref|NP_001128867.1| DKFZP459N111 protein [Pongo abelii]
gi|390458025|ref|XP_003732040.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897269|ref|XP_003911691.1| PREDICTED: ELAV-like protein 2 isoform 5 [Papio anubis]
gi|403272644|ref|XP_003928162.1| PREDICTED: ELAV-like protein 2 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426361469|ref|XP_004047933.1| PREDICTED: ELAV-like protein 2 isoform 5 [Gorilla gorilla gorilla]
gi|55731642|emb|CAH92527.1| hypothetical protein [Pongo abelii]
Length = 389
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 111
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 112 GFVNYIDPKDAEKAINTLNGLRLQTK 137
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|395819370|ref|XP_003783066.1| PREDICTED: ELAV-like protein 2 [Otolemur garnettii]
Length = 388
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 111
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 112 GFVNYIDPKDAEKAINTLNGLRLQTK 137
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|119578987|gb|EAW58583.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_b [Homo sapiens]
Length = 373
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 37 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 96
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 97 GFVNYIDPKDAEKAINTLNGLRLQTK 122
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 140 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 177
>gi|46592818|ref|NP_997568.1| ELAV-like protein 2 isoform 1 [Mus musculus]
gi|29294744|gb|AAH49125.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
gi|34849537|gb|AAH58393.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 373
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 37 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 96
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 97 GFVNYIDPKDAEKAINTLNGLRLQTK 122
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 140 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 177
>gi|62088168|dbj|BAD92531.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) variant [Homo sapiens]
Length = 367
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 31 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 90
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 91 GFVNYIDPKDAEKAINTLNGLRLQTK 116
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 134 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 171
>gi|295424162|ref|NP_001171354.1| ELAV-like protein 2 isoform 4 [Mus musculus]
gi|74206254|dbj|BAE24886.1| unnamed protein product [Mus musculus]
gi|149044490|gb|EDL97749.1| rCG53485, isoform CRA_a [Rattus norvegicus]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 10/90 (11%)
Query: 14 SSVNSHNSASQTPSN-EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++VN++ S+ N E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 19 TTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Query: 73 -LSVVANSIFAPE--------LNGLHSQTE 93
L + P+ LNGL QT+
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|126334000|ref|XP_001364864.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Monodelphis
domestica]
Length = 360
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|119578988|gb|EAW58584.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_c [Homo sapiens]
Length = 360
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 37 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 96
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 97 GFVNYIDPKDAEKAINTLNGLRLQTK 122
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 140 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 177
>gi|291383147|ref|XP_002708097.1| PREDICTED: ELAV-like 2-like isoform 2 [Oryctolagus cuniculus]
Length = 376
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 111
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 112 GFVNYIDPKDAEKAINTLNGLRLQTK 137
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 155 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>gi|126334002|ref|XP_001364932.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Monodelphis
domestica]
Length = 347
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|521144|gb|AAA69698.1| ELAV-like neuronal protein 1 [Homo sapiens]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|115511032|ref|NP_004423.2| ELAV-like protein 2 isoform a [Homo sapiens]
gi|197097794|ref|NP_001127414.1| ELAV-like protein 2 [Pongo abelii]
gi|149736900|ref|XP_001498035.1| PREDICTED: ELAV-like protein 2 isoform 1 [Equus caballus]
gi|291383145|ref|XP_002708096.1| PREDICTED: ELAV-like 2-like isoform 1 [Oryctolagus cuniculus]
gi|296190038|ref|XP_002743026.1| PREDICTED: ELAV-like protein 2 isoform 2 [Callithrix jacchus]
gi|311245695|ref|XP_001924617.2| PREDICTED: ELAV-like protein 2 isoform 1 [Sus scrofa]
gi|332229737|ref|XP_003264044.1| PREDICTED: ELAV-like protein 2 isoform 2 [Nomascus leucogenys]
gi|332831660|ref|XP_520515.3| PREDICTED: ELAV-like protein 2 isoform 3 [Pan troglodytes]
gi|345777488|ref|XP_865062.2| PREDICTED: ELAV-like protein 2 isoform 3 [Canis lupus familiaris]
gi|402897261|ref|XP_003911687.1| PREDICTED: ELAV-like protein 2 isoform 1 [Papio anubis]
gi|403272638|ref|XP_003928159.1| PREDICTED: ELAV-like protein 2 isoform 1 [Saimiri boliviensis
boliviensis]
gi|426220513|ref|XP_004004459.1| PREDICTED: ELAV-like protein 2 isoform 1 [Ovis aries]
gi|426361461|ref|XP_004047929.1| PREDICTED: ELAV-like protein 2 isoform 1 [Gorilla gorilla gorilla]
gi|75070704|sp|Q5R9Z6.1|ELAV2_PONAB RecName: Full=ELAV-like protein 2
gi|93141258|sp|Q12926.2|ELAV2_HUMAN RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Hel-N1
gi|55729364|emb|CAH91414.1| hypothetical protein [Pongo abelii]
gi|119578989|gb|EAW58585.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_d [Homo sapiens]
gi|261860488|dbj|BAI46766.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 2
[synthetic construct]
gi|380784355|gb|AFE64053.1| ELAV-like protein 2 isoform a [Macaca mulatta]
Length = 359
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|6754264|ref|NP_034616.1| ELAV-like protein 2 isoform 2 [Mus musculus]
gi|13124206|sp|Q60899.1|ELAV2_MOUSE RecName: Full=ELAV-like protein 2; AltName: Full=ELAV-like neuronal
protein 1; AltName: Full=Hu-antigen B; Short=HuB;
AltName: Full=Nervous system-specific RNA-binding
protein Mel-N1
gi|1144004|gb|AAC52644.1| nervous system-specific RNA binding protein Mel-N1 [Mus musculus]
gi|15020258|gb|AAK74154.1| ELAV-like neuronal protein-1 [Mus musculus]
gi|148699000|gb|EDL30947.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 360
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|348587078|ref|XP_003479295.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cavia porcellus]
Length = 347
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|348587076|ref|XP_003479294.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cavia porcellus]
Length = 360
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|46592826|ref|NP_997569.1| ELAV-like protein 2 isoform 3 [Mus musculus]
gi|49114392|gb|AAH46598.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [Mus musculus]
Length = 347
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|410978372|ref|XP_003995567.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Felis catus]
Length = 360
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|395514484|ref|XP_003761447.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Sarcophilus
harrisii]
Length = 347
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 11/100 (11%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
P N + + + ++N +S S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESC
Sbjct: 9 PTCNNTANGPTTITNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 68
Query: 63 KLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
KL+RDK TG+ L + P+ LNGL QT+
Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|15020254|gb|AAK74152.1| ELAV-like neuronal protein-3 [Mus musculus]
Length = 348
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|15020256|gb|AAK74153.1| ELAV-like neuronal protein-2 [Mus musculus]
Length = 347
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|354491613|ref|XP_003507949.1| PREDICTED: ELAV-like protein 2 isoform 2 [Cricetulus griseus]
Length = 360
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|354491611|ref|XP_003507948.1| PREDICTED: ELAV-like protein 2 isoform 1 [Cricetulus griseus]
Length = 359
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|344248615|gb|EGW04719.1| ELAV-like protein 2 [Cricetulus griseus]
Length = 347
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 52/74 (70%), Gaps = 9/74 (12%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE--- 84
E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 35 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAE 94
Query: 85 -----LNGLHSQTE 93
LNGL QT+
Sbjct: 95 KAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|432103090|gb|ELK30412.1| ELAV-like protein 2 [Myotis davidii]
Length = 416
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 80 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 139
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 140 GFVNYIDPKDAEKAINTLNGLRLQTK 165
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 183 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 220
>gi|157119097|ref|XP_001659335.1| RNA-binding protein, putative [Aedes aegypti]
gi|108875486|gb|EAT39711.1| AAEL008516-PA, partial [Aedes aegypti]
Length = 359
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 46/57 (80%), Gaps = 4/57 (7%)
Query: 14 SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S+ N N SQ E+SKTNLIVNYLPQ MTQEE++SLFSS+GEVESCKLIRDK T
Sbjct: 13 SADNQQNGGSQ----EDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVT 65
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q +++SLFS G + + +++ D TG
Sbjct: 123 PSSEAIKGANLYVSGLPKNMLQADLESLFSPYGRIITSRILCDNITG 169
>gi|359067954|ref|XP_002707879.2| PREDICTED: LOW QUALITY PROTEIN: eLAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)-like [Bos
taurus]
Length = 346
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|354491615|ref|XP_003507950.1| PREDICTED: ELAV-like protein 2 isoform 3 [Cricetulus griseus]
Length = 356
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 33 NNCSSPVDSGKTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 92
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 93 GFVNYIDPKDAEKAINTLNGLRLQTK 118
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|905387|gb|AAA70417.1| Hel-N2 [Homo sapiens]
Length = 346
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|283945529|ref|NP_001164666.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|283945537|ref|NP_001164668.1| ELAV-like protein 2 isoform b [Homo sapiens]
gi|386781798|ref|NP_001247929.1| ELAV-like protein 2 [Macaca mulatta]
gi|73971067|ref|XP_865045.1| PREDICTED: ELAV-like protein 2 isoform 2 [Canis lupus familiaris]
gi|296190040|ref|XP_002743027.1| PREDICTED: ELAV-like protein 2 isoform 3 [Callithrix jacchus]
gi|296190042|ref|XP_002743028.1| PREDICTED: ELAV-like protein 2 isoform 4 [Callithrix jacchus]
gi|311245697|ref|XP_003121925.1| PREDICTED: ELAV-like protein 2 isoform 2 [Sus scrofa]
gi|332229735|ref|XP_003264043.1| PREDICTED: ELAV-like protein 2 isoform 1 [Nomascus leucogenys]
gi|332229739|ref|XP_003264045.1| PREDICTED: ELAV-like protein 2 isoform 3 [Nomascus leucogenys]
gi|332831658|ref|XP_003312071.1| PREDICTED: ELAV-like protein 2 isoform 1 [Pan troglodytes]
gi|332831662|ref|XP_003312072.1| PREDICTED: ELAV-like protein 2 isoform 2 [Pan troglodytes]
gi|338719470|ref|XP_003364010.1| PREDICTED: ELAV-like protein 2 isoform 2 [Equus caballus]
gi|344271095|ref|XP_003407377.1| PREDICTED: ELAV-like protein 2-like [Loxodonta africana]
gi|402897263|ref|XP_003911688.1| PREDICTED: ELAV-like protein 2 isoform 2 [Papio anubis]
gi|402897265|ref|XP_003911689.1| PREDICTED: ELAV-like protein 2 isoform 3 [Papio anubis]
gi|402897267|ref|XP_003911690.1| PREDICTED: ELAV-like protein 2 isoform 4 [Papio anubis]
gi|403272640|ref|XP_003928160.1| PREDICTED: ELAV-like protein 2 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403272642|ref|XP_003928161.1| PREDICTED: ELAV-like protein 2 isoform 3 [Saimiri boliviensis
boliviensis]
gi|410042502|ref|XP_003951453.1| PREDICTED: ELAV-like protein 2 [Pan troglodytes]
gi|410978370|ref|XP_003995566.1| PREDICTED: ELAV-like protein 2-like isoform 1 [Felis catus]
gi|426220515|ref|XP_004004460.1| PREDICTED: ELAV-like protein 2 isoform 2 [Ovis aries]
gi|426220517|ref|XP_004004461.1| PREDICTED: ELAV-like protein 2 isoform 3 [Ovis aries]
gi|426361463|ref|XP_004047930.1| PREDICTED: ELAV-like protein 2 isoform 2 [Gorilla gorilla gorilla]
gi|426361465|ref|XP_004047931.1| PREDICTED: ELAV-like protein 2 isoform 3 [Gorilla gorilla gorilla]
gi|426361467|ref|XP_004047932.1| PREDICTED: ELAV-like protein 2 isoform 4 [Gorilla gorilla gorilla]
gi|441622584|ref|XP_004088846.1| PREDICTED: ELAV-like protein 2 [Nomascus leucogenys]
gi|21265137|gb|AAH30692.1| ELAVL2 protein [Homo sapiens]
gi|119578985|gb|EAW58581.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|119578986|gb|EAW58582.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B), isoform CRA_a [Homo sapiens]
gi|123981428|gb|ABM82543.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|123996267|gb|ABM85735.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|157928304|gb|ABW03448.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu
antigen B) [synthetic construct]
gi|384945702|gb|AFI36456.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|384945704|gb|AFI36457.1| ELAV-like protein 2 isoform b [Macaca mulatta]
gi|387541444|gb|AFJ71349.1| ELAV-like protein 2 isoform b [Macaca mulatta]
Length = 346
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 9/86 (10%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSV 75
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+ L
Sbjct: 23 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82
Query: 76 VANSIFAPE--------LNGLHSQTE 93
+ P+ LNGL QT+
Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|312370698|gb|EFR19033.1| hypothetical protein AND_23174 [Anopheles darlingi]
Length = 468
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/43 (86%), Positives = 41/43 (95%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E+SKTNLIVNYLPQ MTQEE++SLFSS+GEVESCKLIRDK TG
Sbjct: 209 EDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDKVTG 251
>gi|170061963|ref|XP_001866463.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167880034|gb|EDS43417.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 341
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/42 (88%), Positives = 41/42 (97%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+SKTNLIVNYLPQTMTQEE+KSLFSS+G+VESCKLIRDK T
Sbjct: 23 EDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVT 64
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL V+ L ++MTQ+++++LF G++ + +++ D TG
Sbjct: 106 PSSDAIKGANLYVSGLSKSMTQQDLEALFQPYGQIITSRILCDNITG 152
>gi|395512536|ref|XP_003775304.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Sarcophilus
harrisii]
Length = 287
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 5/63 (7%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
+L N + S N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK
Sbjct: 23 ALPNGPLVSTNGAT-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKI 77
Query: 70 TGE 72
TG+
Sbjct: 78 TGQ 80
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 128 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 165
>gi|342837655|tpg|DAA34917.1| TPA_inf: embryonic lethal abnormal vision 1-like protein [Schmidtea
mediterranea]
Length = 466
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%), Gaps = 9/70 (12%)
Query: 12 HNSSVNSHNSASQTPS---------NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
N ++ N S TPS N E+KTNLIVNYLP MTQEE+++LF+S+GEVESC
Sbjct: 73 WNGTICERNMESVTPSPTSNDSLNMNCENKTNLIVNYLPPNMTQEEVRALFTSIGEVESC 132
Query: 63 KLIRDKTTGE 72
KL+RDKTTGE
Sbjct: 133 KLVRDKTTGE 142
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL + LP+ MTQ E++ FS G++ + +++ D TG
Sbjct: 181 PSSESIKGANLYICGLPKKMTQVELEEQFSQCGKIITARILYDNKTG 227
>gi|15021899|dbj|BAB62225.1| Hu/elav class neuron-specific RNA binding protein [Branchiostoma
belcheri]
Length = 326
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/46 (82%), Positives = 44/46 (95%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S ++SKTNLIVNYLPQTMTQ+E+KSLFSS+GEVESCKLIRDK TG+
Sbjct: 17 STKDSKTNLIVNYLPQTMTQDEIKSLFSSIGEVESCKLIRDKVTGQ 62
Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS++ K NL V+ LP+TMTQ++++ LF + G + + +++ D TG+
Sbjct: 101 PSSQAIKDANLYVSGLPKTMTQQDLEGLFEAHGRIITSRILFDPVTGQ 148
>gi|390465926|ref|XP_003733492.1| PREDICTED: ELAV-like protein 4 isoform 5 [Callithrix jacchus]
gi|403258123|ref|XP_003921628.1| PREDICTED: ELAV-like protein 4 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
Query: 8 NGSLHNSSVNSHNSASQTPS-------NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
NG N+S N+ PS ++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 14 NGPTSNTSNGPSNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 73
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 74 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|390465918|ref|XP_003733489.1| PREDICTED: ELAV-like protein 4 isoform 2 [Callithrix jacchus]
gi|403258117|ref|XP_003921625.1| PREDICTED: ELAV-like protein 4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 371
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
Query: 8 NGSLHNSSVNSHNSASQTPS-------NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
NG N+S N+ PS ++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 19 NGPTSNTSNGPSNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 78
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 79 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|390465920|ref|XP_003733490.1| PREDICTED: ELAV-like protein 4 isoform 3 [Callithrix jacchus]
gi|403258119|ref|XP_003921626.1| PREDICTED: ELAV-like protein 4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 366
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
Query: 8 NGSLHNSSVNSHNSASQTPS-------NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
NG N+S N+ PS ++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 14 NGPTSNTSNGPSNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 73
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 74 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|390465924|ref|XP_002750851.2| PREDICTED: ELAV-like protein 4 isoform 1 [Callithrix jacchus]
Length = 366
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
Query: 8 NGSLHNSSVNSHNSASQTPS-------NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
NG N+S N+ PS ++SKTNLIVNYLPQ MTQEE +SLF S+GE+E
Sbjct: 14 NGPTSNTSNGPSNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIE 73
Query: 61 SCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
SCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 74 SCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|390465922|ref|XP_003733491.1| PREDICTED: ELAV-like protein 4 isoform 4 [Callithrix jacchus]
gi|403258121|ref|XP_003921627.1| PREDICTED: ELAV-like protein 4 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 402
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 17/106 (16%)
Query: 5 PQ-QNGSLHNSSVNSHNSASQTPS-------NEESKTNLIVNYLPQTMTQEEMKSLFSSV 56
PQ NG N+S N+ PS ++SKTNLIVNYLPQ MTQEE +SLF S+
Sbjct: 46 PQVSNGPTSNTSNGPSNNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 105
Query: 57 GEVESCKLIRDKTTGE-LSVVANSIFAPE--------LNGLHSQTE 93
GE+ESCKL+RDK TG+ L + P+ LNGL QT+
Sbjct: 106 GEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 151
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 169 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 206
>gi|345308310|ref|XP_003428682.1| PREDICTED: ELAV-like protein 2-like [Ornithorhynchus anatinus]
Length = 595
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
P N + + S ++N +S S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESC
Sbjct: 9 PTCNNTANGPSTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 68
Query: 63 KLIRDKTTGELS 74
KL+RDK T E S
Sbjct: 69 KLVRDKITDEPS 80
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
+GS+ +S + S ++ S NL V+ LP+TMTQ+E++ LFS G + + +++ D
Sbjct: 335 HGSVQHSVPHFAVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVD 394
Query: 68 KTTG 71
+ TG
Sbjct: 395 QVTG 398
>gi|134026264|gb|AAI36135.1| ELAV (embryonic lethal, abnormal vision)-like 3 (Hu antigen C)
[Xenopus (Silurana) tropicalis]
Length = 342
Score = 81.3 bits (199), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG +N N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RD
Sbjct: 15 NGPGSVGILNGTNGAA-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRD 69
Query: 68 KTTGE 72
K TG+
Sbjct: 70 KITGQ 74
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM Q+EM+ LFS G + + +++ D+ TG
Sbjct: 122 NLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTG 159
>gi|357617939|gb|EHJ71078.1| putative RNA-binding protein [Danaus plexippus]
Length = 397
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 44/49 (89%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
+S Q S EESKTNLI+NYLPQ+MTQEE++SLFSS+GEVESCKLIR+K
Sbjct: 5 DSEQQNGSGEESKTNLIINYLPQSMTQEEIRSLFSSIGEVESCKLIRNK 53
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+TMTQ E++ LFS G + + +++ + + G
Sbjct: 109 PSSEAIKGANLYVSGLPKTMTQIELERLFSPYGRIITSRILCENSGGR 156
>gi|71896483|ref|NP_001025497.1| ELAV-like protein 3 [Xenopus (Silurana) tropicalis]
gi|123913100|sp|Q28FX0.1|ELAV3_XENTR RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|89266725|emb|CAJ83874.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Xenopus (Silurana) tropicalis]
Length = 343
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%), Gaps = 5/65 (7%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG +N N A+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RD
Sbjct: 15 NGPGSVGILNGTNGAA-----DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRD 69
Query: 68 KTTGE 72
K TG+
Sbjct: 70 KITGQ 74
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
NL V+ LP+TM Q+EM+ LFS G + + +++ D+ TG +S
Sbjct: 122 NLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGSVS 162
>gi|148235423|ref|NP_001081035.1| ELAV-like protein 2 [Xenopus laevis]
gi|288561905|sp|Q91903.2|ELAV2_XENLA RecName: Full=ELAV-like protein 2; AltName: Full=Elav like-1;
Short=Xel-1; AltName: Full=Protein ElrB; AltName:
Full=p45
gi|608539|gb|AAA96943.1| ribonucleoprotein [Xenopus laevis]
Length = 389
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N+ N +S SN E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK T
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 103
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|148236291|ref|NP_001081613.1| ELAV (embryonic lethal, abnormal vision)-like 2 (Hu antigen B)
[Xenopus laevis]
gi|728726|emb|CAA59430.1| Xel-1 [Xenopus laevis]
Length = 389
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N+ N +S SN E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK T
Sbjct: 48 NTINCSSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 103
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 154 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>gi|17532863|ref|NP_496057.1| Protein EXC-7 [Caenorhabditis elegans]
gi|3876753|emb|CAA85327.1| Protein EXC-7 [Caenorhabditis elegans]
Length = 456
Score = 81.3 bits (199), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQ MTQEE++SLF+S+GE+ESCKL+RDK TG+
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQ 81
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PSN++ K +NL V+ +P++MT E++S+F G++ + +++ D TG
Sbjct: 120 PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTG 166
>gi|308464232|ref|XP_003094384.1| CRE-EXC-7 protein [Caenorhabditis remanei]
gi|308247806|gb|EFO91758.1| CRE-EXC-7 protein [Caenorhabditis remanei]
Length = 457
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQ MTQEE++SLF+S+GE+ESCKL+RDK TG+
Sbjct: 41 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQ 83
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PSN++ K +NL V+ +P++MT E++S+F G++ + +++ D TG
Sbjct: 122 PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTG 168
>gi|341901304|gb|EGT57239.1| CBN-EXC-7 protein [Caenorhabditis brenneri]
Length = 459
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQ MTQEE++SLF+S+GE+ESCKL+RDK TG+
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQ 81
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PSN++ K +NL V+ +P++MT E++S+F G++ + +++ D TG
Sbjct: 120 PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTG 166
>gi|268529184|ref|XP_002629718.1| C. briggsae CBR-EXC-7 protein [Caenorhabditis briggsae]
Length = 456
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQ MTQEE++SLF+S+GE+ESCKL+RDK TG+
Sbjct: 42 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQ 84
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PSN++ K +NL V+ +P++MT E++ +F G++ + +++ D TG
Sbjct: 123 PSNDQIKGSNLYVSGIPKSMTLHELEGIFRPFGQIITSRILSDNVTG 169
>gi|213623456|gb|AAI69769.1| ElrC protein [Xenopus laevis]
Length = 341
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK TG+
Sbjct: 30 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ 73
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM Q+EM+ LFS G + + +++ D+ TG
Sbjct: 121 NLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTG 158
>gi|239938028|gb|ACS36113.1| RNA-binding protein Elav1 [Capitella teleta]
Length = 143
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 43/44 (97%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++SKTNLIVNYLPQ+MTQ++++SLFSS+GEVESCKLIRDK TG+
Sbjct: 24 KDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQ 67
>gi|148224170|ref|NP_001084080.1| ELAV-like protein 3 [Xenopus laevis]
gi|82245647|sp|Q91584.1|ELAV3_XENLA RecName: Full=ELAV-like protein 3; AltName: Full=Protein ElrC
gi|608541|gb|AAA96944.1| ribonucleoprotein [Xenopus laevis]
Length = 348
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 40/44 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK TG+
Sbjct: 30 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ 73
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM Q+EM+ LFS G + + +++ D+ TG
Sbjct: 121 NLYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTG 158
>gi|443724444|gb|ELU12456.1| hypothetical protein CAPTEDRAFT_172701 [Capitella teleta]
Length = 359
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 43/44 (97%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++SKTNLIVNYLPQ+MTQ++++SLFSS+GEVESCKLIRDK TG+
Sbjct: 24 KDSKTNLIVNYLPQSMTQDDIRSLFSSIGEVESCKLIRDKATGQ 67
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+ MTQ +++++F+ G + + +++ D+ TG
Sbjct: 106 PSSESIKGANLYISGLPKNMTQVDLENMFNHCGNIITSRILCDQNTG 152
>gi|71051886|gb|AAH99348.1| ElrD protein, partial [Xenopus laevis]
Length = 360
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 19 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 78
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 79 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 109
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 127 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 164
>gi|224058156|ref|XP_002196701.1| PREDICTED: ELAV-like protein 4 [Taeniopygia guttata]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 30 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|221042398|dbj|BAH12876.1| unnamed protein product [Homo sapiens]
Length = 332
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 6 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 65
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 66 AEKAINTLNGLRLQTK 81
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 99 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 136
>gi|45382273|ref|NP_990161.1| ELAV-like protein 4 [Gallus gallus]
gi|5739519|gb|AAD50508.1|AF176675_1 RNA-binding protein HuD [Gallus gallus]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 30 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 90 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|608543|gb|AAA96945.1| ribonucleoprotein [Xenopus laevis]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 25 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 85 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|28879001|gb|AAH48159.1| Elavl4 protein [Mus musculus]
Length = 412
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|149693653|ref|XP_001492549.1| PREDICTED: ELAV-like protein 4 isoform 3 [Equus caballus]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|296484904|tpg|DAA27019.1| TPA: ELAV-like 2-like [Bos taurus]
Length = 620
Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/70 (57%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPS--NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
P N + + + ++N +S S E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESC
Sbjct: 283 PTCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESC 342
Query: 63 KLIRDKTTGE 72
KL+RDK TG+
Sbjct: 343 KLVRDKITGQ 352
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 400 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 437
>gi|326925350|ref|XP_003208879.1| PREDICTED: ELAV-like protein 4-like [Meleagris gallopavo]
Length = 379
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 59/91 (64%), Gaps = 12/91 (13%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 38 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 97
Query: 72 E-LSVVANSIFAPE--------LNGLHSQTE 93
+ L + P+ LNGL QT+
Sbjct: 98 QSLGYGFVNYIDPKDAEKAINTLNGLRLQTK 128
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 146 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 183
>gi|12851808|dbj|BAB29173.1| unnamed protein product [Mus musculus]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM Q+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMIQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|254281262|ref|NP_001156871.1| ELAV-like protein 4 isoform d [Mus musculus]
gi|73977013|ref|XP_860413.1| PREDICTED: ELAV-like protein 4 isoform 17 [Canis lupus familiaris]
gi|291398928|ref|XP_002715152.1| PREDICTED: ELAV-like 4-like isoform 3 [Oryctolagus cuniculus]
gi|354468152|ref|XP_003496531.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cricetulus griseus]
gi|426215484|ref|XP_004002002.1| PREDICTED: ELAV-like protein 4 isoform 2 [Ovis aries]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|348554579|ref|XP_003463103.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cavia porcellus]
Length = 347
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 93 AEKAINTLNGLRLQTK 108
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|338721769|ref|XP_003364429.1| PREDICTED: ELAV-like protein 4 [Equus caballus]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|324512454|gb|ADY45159.1| ELAV-like protein 1 [Ascaris suum]
Length = 477
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 42/43 (97%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQTM+QEE++SLFSS+GE++SCKL+RDK TG+
Sbjct: 100 ESKTNLIINYLPQTMSQEEVRSLFSSMGEIDSCKLVRDKITGQ 142
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP++M+Q E+++LF G++ + +++ D TG
Sbjct: 181 PSSESIKGANLYVSGLPKSMSQPELENLFRPYGQIITSRILSDNITG 227
>gi|125991914|ref|NP_001075075.1| ELAV-like protein 4 [Bos taurus]
gi|73976985|ref|XP_859918.1| PREDICTED: ELAV-like protein 4 isoform 5 [Canis lupus familiaris]
gi|291398926|ref|XP_002715151.1| PREDICTED: ELAV-like 4-like isoform 2 [Oryctolagus cuniculus]
gi|301772324|ref|XP_002921582.1| PREDICTED: ELAV-like protein 4-like [Ailuropoda melanoleuca]
gi|426215482|ref|XP_004002001.1| PREDICTED: ELAV-like protein 4 isoform 1 [Ovis aries]
gi|124829171|gb|AAI33284.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Bos taurus]
gi|296489084|tpg|DAA31197.1| TPA: ELAV-like 4 [Bos taurus]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|149693651|ref|XP_001492503.1| PREDICTED: ELAV-like protein 4 isoform 1 [Equus caballus]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|2801552|gb|AAC40080.1| RNA binding protein Elavl4 [Mus musculus]
Length = 346
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 93 AEKAINTLNGLRLQTK 108
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|194207476|ref|XP_001492529.2| PREDICTED: ELAV-like protein 4 isoform 2 [Equus caballus]
Length = 383
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|114556468|ref|XP_001135779.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 12 [Pan troglodytes]
gi|332219801|ref|XP_003259046.1| PREDICTED: ELAV-like protein 4 isoform 1 [Nomascus leucogenys]
gi|395855041|ref|XP_003799980.1| PREDICTED: ELAV-like protein 4 isoform 3 [Otolemur garnettii]
gi|397518902|ref|XP_003829614.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pan paniscus]
gi|402854503|ref|XP_003891907.1| PREDICTED: ELAV-like protein 4 isoform 1 [Papio anubis]
gi|426329573|ref|XP_004025813.1| PREDICTED: ELAV-like protein 4 isoform 1 [Gorilla gorilla gorilla]
gi|221042444|dbj|BAH12899.1| unnamed protein product [Homo sapiens]
gi|261860582|dbj|BAI46813.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like protein 4
[synthetic construct]
Length = 371
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|84662766|ref|NP_034618.2| ELAV-like protein 4 isoform a [Mus musculus]
gi|354468156|ref|XP_003496533.1| PREDICTED: ELAV-like protein 4 isoform 3 [Cricetulus griseus]
gi|2500580|sp|Q61701.1|ELAV4_MOUSE RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|603495|dbj|BAA06723.1| HuD [Mus musculus]
gi|440906869|gb|ELR57085.1| ELAV-like protein 4 [Bos grunniens mutus]
Length = 385
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|73977009|ref|XP_532585.2| PREDICTED: ELAV-like protein 4 isoform 1 [Canis lupus familiaris]
gi|291398932|ref|XP_002715154.1| PREDICTED: ELAV-like 4-like isoform 5 [Oryctolagus cuniculus]
gi|426215486|ref|XP_004002003.1| PREDICTED: ELAV-like protein 4 isoform 3 [Ovis aries]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|221316773|ref|NP_001138249.1| ELAV-like protein 4 isoform 5 [Homo sapiens]
gi|114556458|ref|XP_001135525.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 9 [Pan troglodytes]
gi|332219805|ref|XP_003259048.1| PREDICTED: ELAV-like protein 4 isoform 3 [Nomascus leucogenys]
gi|397518908|ref|XP_003829617.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pan paniscus]
gi|402854507|ref|XP_003891909.1| PREDICTED: ELAV-like protein 4 isoform 3 [Papio anubis]
gi|426329577|ref|XP_004025815.1| PREDICTED: ELAV-like protein 4 isoform 3 [Gorilla gorilla gorilla]
gi|119627250|gb|EAX06845.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_e [Homo sapiens]
gi|221041752|dbj|BAH12553.1| unnamed protein product [Homo sapiens]
Length = 369
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 43 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 103 AEKAINTLNGLRLQTK 118
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|351713507|gb|EHB16426.1| ELAV-like protein 4 [Heterocephalus glaber]
Length = 385
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|73977005|ref|XP_860272.1| PREDICTED: ELAV-like protein 4 isoform 15 [Canis lupus familiaris]
Length = 380
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|348554577|ref|XP_003463102.1| PREDICTED: ELAV-like protein 4 isoform 1 [Cavia porcellus]
gi|354468154|ref|XP_003496532.1| PREDICTED: ELAV-like protein 4 isoform 2 [Cricetulus griseus]
Length = 383
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|345780791|ref|XP_859879.2| PREDICTED: ELAV-like protein 4 isoform 4 [Canis lupus familiaris]
Length = 364
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 38 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 97
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 98 AEKAINTLNGLRLQTK 113
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 131 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 168
>gi|344241813|gb|EGV97916.1| ELAV-like protein 4 [Cricetulus griseus]
gi|431896875|gb|ELK06139.1| ELAV-like protein 4, partial [Pteropus alecto]
Length = 350
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 37 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 96
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 97 AEKAINTLNGLRLQTK 112
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 130 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 167
>gi|297664981|ref|XP_002810891.1| PREDICTED: ELAV-like protein 4 isoform 4 [Pongo abelii]
Length = 366
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|254281259|ref|NP_001156869.1| ELAV-like protein 4 isoform c [Mus musculus]
Length = 356
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 43 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 103 AEKAINTLNGLRLQTK 118
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|117647212|ref|NP_001071119.1| ELAV-like protein 4 [Rattus norvegicus]
gi|2500581|sp|O09032.1|ELAV4_RAT RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|1911579|gb|AAB50733.1| HuD [Rattus sp.]
gi|165970854|gb|AAI58559.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Rattus norvegicus]
Length = 373
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 93 AEKAINTLNGLRLQTK 108
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|297664979|ref|XP_002810890.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pongo abelii]
Length = 371
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|297664975|ref|XP_002810888.1| PREDICTED: ELAV-like protein 4 isoform 1 [Pongo abelii]
Length = 369
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 43 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 103 AEKAINTLNGLRLQTK 118
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|221316767|ref|NP_001138246.1| ELAV-like protein 4 isoform 2 [Homo sapiens]
gi|384475927|ref|NP_001245109.1| ELAV-like protein 4 [Macaca mulatta]
gi|114556464|ref|XP_001135692.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 11 [Pan troglodytes]
gi|332219803|ref|XP_003259047.1| PREDICTED: ELAV-like protein 4 isoform 2 [Nomascus leucogenys]
gi|395855037|ref|XP_003799978.1| PREDICTED: ELAV-like protein 4 isoform 1 [Otolemur garnettii]
gi|397518904|ref|XP_003829615.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pan paniscus]
gi|402854505|ref|XP_003891908.1| PREDICTED: ELAV-like protein 4 isoform 2 [Papio anubis]
gi|426329575|ref|XP_004025814.1| PREDICTED: ELAV-like protein 4 isoform 2 [Gorilla gorilla gorilla]
gi|14280327|gb|AAK57540.1| HUD1 [Homo sapiens]
gi|380810346|gb|AFE77048.1| ELAV-like protein 4 isoform 2 [Macaca mulatta]
Length = 366
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|84662764|ref|NP_001033787.1| ELAV-like protein 4 isoform b [Mus musculus]
gi|291398924|ref|XP_002715150.1| PREDICTED: ELAV-like 4-like isoform 1 [Oryctolagus cuniculus]
gi|426215488|ref|XP_004002004.1| PREDICTED: ELAV-like protein 4 isoform 4 [Ovis aries]
gi|26347767|dbj|BAC37532.1| unnamed protein product [Mus musculus]
gi|112180554|gb|AAH52451.2| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D) [Mus musculus]
Length = 380
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|149693657|ref|XP_001492578.1| PREDICTED: ELAV-like protein 4 isoform 4 [Equus caballus]
Length = 380
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|334321532|ref|XP_003340124.1| PREDICTED: ELAV-like protein 4 isoform 2 [Monodelphis domestica]
Length = 347
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 33 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 92
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 93 AEKAINTLNGLRLQTK 108
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|355557990|gb|EHH14770.1| hypothetical protein EGK_00744 [Macaca mulatta]
Length = 385
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|221316771|ref|NP_001138248.1| ELAV-like protein 4 isoform 4 [Homo sapiens]
gi|114556460|ref|XP_001135439.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 8 [Pan troglodytes]
gi|332219809|ref|XP_003259050.1| PREDICTED: ELAV-like protein 4 isoform 5 [Nomascus leucogenys]
gi|395855043|ref|XP_003799981.1| PREDICTED: ELAV-like protein 4 isoform 4 [Otolemur garnettii]
gi|397518910|ref|XP_003829618.1| PREDICTED: ELAV-like protein 4 isoform 5 [Pan paniscus]
gi|402854511|ref|XP_003891911.1| PREDICTED: ELAV-like protein 4 isoform 5 [Papio anubis]
gi|426329581|ref|XP_004025817.1| PREDICTED: ELAV-like protein 4 isoform 5 [Gorilla gorilla gorilla]
gi|14280323|gb|AAK57538.1| HUD3 [Homo sapiens]
Length = 366
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|395730528|ref|XP_003775743.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 366
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|119627249|gb|EAX06844.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_d [Homo sapiens]
Length = 365
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 39 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 98
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 99 AEKAINTLNGLRLQTK 114
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 132 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 169
>gi|23271926|gb|AAH36071.1| ELAVL4 protein [Homo sapiens]
Length = 366
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ + TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVGQVTG 170
>gi|179537|gb|AAA58396.1| brain protein [Homo sapiens]
gi|14280329|gb|AAK57541.1| HUDPRO1 [Homo sapiens]
gi|119627247|gb|EAX06842.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Homo sapiens]
Length = 380
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|297664977|ref|XP_002810889.1| PREDICTED: ELAV-like protein 4 isoform 2 [Pongo abelii]
Length = 380
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|395855039|ref|XP_003799979.1| PREDICTED: ELAV-like protein 4 isoform 2 [Otolemur garnettii]
Length = 383
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|281347138|gb|EFB22722.1| hypothetical protein PANDA_010481 [Ailuropoda melanoleuca]
Length = 377
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 37 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 96
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 97 AEKAINTLNGLRLQTK 112
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 130 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 167
>gi|119627248|gb|EAX06843.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Homo sapiens]
Length = 356
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 43 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 103 AEKAINTLNGLRLQTK 118
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|221316765|ref|NP_068771.2| ELAV-like protein 4 isoform 1 [Homo sapiens]
gi|114556466|ref|XP_001134946.1| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 2 [Pan troglodytes]
gi|332219811|ref|XP_003259051.1| PREDICTED: ELAV-like protein 4 isoform 6 [Nomascus leucogenys]
gi|395855045|ref|XP_003799982.1| PREDICTED: ELAV-like protein 4 isoform 5 [Otolemur garnettii]
gi|397518912|ref|XP_003829619.1| PREDICTED: ELAV-like protein 4 isoform 6 [Pan paniscus]
gi|402854513|ref|XP_003891912.1| PREDICTED: ELAV-like protein 4 isoform 6 [Papio anubis]
gi|426329583|ref|XP_004025818.1| PREDICTED: ELAV-like protein 4 isoform 6 [Gorilla gorilla gorilla]
gi|223590202|sp|P26378.2|ELAV4_HUMAN RecName: Full=ELAV-like protein 4; AltName: Full=Hu-antigen D;
Short=HuD; AltName: Full=Paraneoplastic
encephalomyelitis antigen HuD
gi|380810344|gb|AFE77047.1| ELAV-like protein 4 isoform 1 [Macaca mulatta]
Length = 380
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|221316769|ref|NP_001138247.1| ELAV-like protein 4 isoform 3 [Homo sapiens]
gi|14280325|gb|AAK57539.1| HUD4 [Homo sapiens]
Length = 383
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|395730526|ref|XP_003775742.1| PREDICTED: ELAV-like protein 4 [Pongo abelii]
Length = 402
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 76 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 135
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 136 AEKAINTLNGLRLQTK 151
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 169 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 206
>gi|344278909|ref|XP_003411234.1| PREDICTED: ELAV-like protein 4-like [Loxodonta africana]
Length = 419
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 93 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 152
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 153 AEKAINTLNGLRLQTK 168
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 186 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 223
>gi|291398930|ref|XP_002715153.1| PREDICTED: ELAV-like 4-like isoform 4 [Oryctolagus cuniculus]
Length = 402
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 76 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 135
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 136 AEKAINTLNGLRLQTK 151
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 169 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 206
>gi|334321530|ref|XP_001373647.2| PREDICTED: ELAV-like protein 4 isoform 1 [Monodelphis domestica]
Length = 366
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|332219807|ref|XP_003259049.1| PREDICTED: ELAV-like protein 4 isoform 4 [Nomascus leucogenys]
gi|332808951|ref|XP_001135610.2| PREDICTED: ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 isoform 10 [Pan troglodytes]
gi|397518906|ref|XP_003829616.1| PREDICTED: ELAV-like protein 4 isoform 3 [Pan paniscus]
gi|402854509|ref|XP_003891910.1| PREDICTED: ELAV-like protein 4 isoform 4 [Papio anubis]
gi|426329579|ref|XP_004025816.1| PREDICTED: ELAV-like protein 4 isoform 4 [Gorilla gorilla gorilla]
gi|119627246|gb|EAX06841.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Homo sapiens]
Length = 402
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 76 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 135
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 136 AEKAINTLNGLRLQTK 151
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 169 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 206
>gi|148698744|gb|EDL30691.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_a [Mus musculus]
gi|149035668|gb|EDL90349.1| rCG50282, isoform CRA_a [Rattus norvegicus]
Length = 173
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 43 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 102
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 103 AEKAINTLNGLRLQTK 118
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 136 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 173
>gi|148698745|gb|EDL30692.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_b [Mus musculus]
gi|149035669|gb|EDL90350.1| rCG50282, isoform CRA_b [Rattus norvegicus]
Length = 170
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 99
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 100 AEKAINTLNGLRLQTK 115
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 133 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>gi|355745275|gb|EHH49900.1| hypothetical protein EGM_00635 [Macaca fascicularis]
Length = 289
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|149035670|gb|EDL90351.1| rCG50282, isoform CRA_c [Rattus norvegicus]
Length = 175
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 104
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 105 AEKAINTLNGLRLQTK 120
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 138 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>gi|148698746|gb|EDL30693.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), isoform CRA_c [Mus musculus]
Length = 167
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 37 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 96
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 97 AEKAINTLNGLRLQTK 112
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 130 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 167
>gi|410967448|ref|XP_003990231.1| PREDICTED: ELAV-like protein 4 [Felis catus]
Length = 494
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 9/76 (11%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 57 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKD 116
Query: 85 -------LNGLHSQTE 93
LNGL QT+
Sbjct: 117 AEKAINTLNGLRLQTK 132
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 150 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 187
>gi|81914424|sp|Q8CH84.1|ELAV2_RAT RecName: Full=ELAV-like protein 2; AltName: Full=Hu-antigen B;
Short=HuB
gi|27374986|dbj|BAC53775.1| RNA binding protein HuB [Rattus norvegicus]
Length = 359
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 10/90 (11%)
Query: 14 SSVNSHNSASQTPSN-EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++VN++ S+ N E+SKTNLI NYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 19 TTVNNNCSSPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Query: 73 -LSVVANSIFAPE--------LNGLHSQTE 93
L + P+ LNGL QT+
Sbjct: 79 SLGYGFVNYIDPKDAEKAINTLNGLRLQTK 108
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>gi|345309963|ref|XP_003428909.1| PREDICTED: hypothetical protein LOC100681228 [Ornithorhynchus
anatinus]
Length = 179
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%), Gaps = 3/65 (4%)
Query: 10 SLHNSSVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+ + S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+R
Sbjct: 115 TANGPSSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVR 174
Query: 67 DKTTG 71
DK TG
Sbjct: 175 DKITG 179
>gi|327263685|ref|XP_003216648.1| PREDICTED: ELAV-like protein 2-like isoform 2 [Anolis carolinensis]
Length = 390
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK T
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 156 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 193
>gi|390458027|ref|XP_003732041.1| PREDICTED: ELAV-like protein 2 [Callithrix jacchus]
gi|402897271|ref|XP_003911692.1| PREDICTED: ELAV-like protein 2 isoform 6 [Papio anubis]
gi|426361471|ref|XP_004047934.1| PREDICTED: ELAV-like protein 2 isoform 6 [Gorilla gorilla gorilla]
Length = 390
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 45/54 (83%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N+ +S + + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK T
Sbjct: 52 NNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 105
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 156 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 193
>gi|194911931|ref|XP_001982402.1| GG12756 [Drosophila erecta]
gi|190648078|gb|EDV45371.1| GG12756 [Drosophila erecta]
Length = 466
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 6/68 (8%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG+ + S N N +S E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 123 PNTNGNAGSGSQNGSNGSS------ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 176
Query: 65 IRDKTTGE 72
IRDK+ G+
Sbjct: 177 IRDKSQGQ 184
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 223 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 265
>gi|27497553|gb|AAO13018.1| RNA-binding protein HU [Oncorhynchus mykiss]
Length = 77
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/43 (79%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK TG+
Sbjct: 1 DSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ 43
>gi|27696830|gb|AAH43735.1| ElrD protein [Xenopus laevis]
Length = 395
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 25 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 84
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 162 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 199
>gi|444726522|gb|ELW67052.1| ELAV-like protein 4 [Tupaia chinensis]
Length = 423
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 9/74 (12%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-- 84
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG V N I +
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGYGFV--NYIDPKDAE 90
Query: 85 -----LNGLHSQTE 93
LNGL QT+
Sbjct: 91 KAINTLNGLRLQTK 104
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 190 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 227
>gi|147901954|ref|NP_001080909.1| ELAV-like protein 4 [Xenopus laevis]
gi|82240321|sp|Q7SZT7.1|ELAV4_XENLA RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|33585950|gb|AAH56021.1| ElrD protein [Xenopus laevis]
Length = 400
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 30 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 167 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 204
>gi|149020435|gb|EDL78240.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Rattus norvegicus]
Length = 251
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 163
>gi|148693298|gb|EDL25245.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Mus musculus]
Length = 250
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 162
>gi|156717966|ref|NP_001096525.1| ELAV-like protein 4 [Xenopus (Silurana) tropicalis]
gi|288561889|sp|A4QNI8.1|ELAV4_XENTR RecName: Full=ELAV-like protein 4; AltName: Full=Protein ElrD
gi|138519953|gb|AAI35737.1| LOC100125165 protein [Xenopus (Silurana) tropicalis]
Length = 400
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 3/60 (5%)
Query: 15 SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG
Sbjct: 30 SSNSRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITG 89
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 167 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 204
>gi|109123517|ref|XP_001107360.1| PREDICTED: ELAV-like protein 3-like [Macaca mulatta]
gi|296232958|ref|XP_002761808.1| PREDICTED: ELAV-like protein 3 [Callithrix jacchus]
Length = 251
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|426229023|ref|XP_004008593.1| PREDICTED: ELAV-like protein 3 isoform 1 [Ovis aries]
Length = 359
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 162
>gi|355755476|gb|EHH59223.1| Hu-antigen C, partial [Macaca fascicularis]
Length = 237
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 162
>gi|354475185|ref|XP_003499810.1| PREDICTED: ELAV-like protein 3 [Cricetulus griseus]
Length = 359
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 162
>gi|27229298|ref|NP_758827.1| ELAV-like protein 3 [Rattus norvegicus]
gi|34328053|ref|NP_034617.1| ELAV-like protein 3 [Mus musculus]
gi|3913870|sp|Q60900.1|ELAV3_MOUSE RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC
gi|1146120|gb|AAC52999.1| mHuC-L [Mus musculus]
gi|26006109|dbj|BAC41352.1| HuC [Rattus norvegicus]
gi|30354162|gb|AAH52097.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C) [Mus musculus]
gi|148693297|gb|EDL25244.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Mus musculus]
gi|149020436|gb|EDL78241.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Rattus norvegicus]
Length = 367
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 163
>gi|49355765|ref|NP_115657.2| ELAV-like protein 3 isoform 2 [Homo sapiens]
gi|119604627|gb|EAW84221.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_b [Homo sapiens]
gi|261861050|dbj|BAI47047.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3
[synthetic construct]
gi|380783931|gb|AFE63841.1| ELAV-like protein 3 isoform 2 [Macaca mulatta]
Length = 360
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|440910150|gb|ELR59976.1| ELAV-like protein 3, partial [Bos grunniens mutus]
Length = 373
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 162
>gi|351694381|gb|EHA97299.1| ELAV-like protein 3, partial [Heterocephalus glaber]
Length = 344
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 30 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 75
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 122 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 160
>gi|395850849|ref|XP_003797986.1| PREDICTED: ELAV-like protein 3 isoform 2 [Otolemur garnettii]
gi|402904299|ref|XP_003914984.1| PREDICTED: ELAV-like protein 3 isoform 2 [Papio anubis]
Length = 359
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 162
>gi|344240064|gb|EGV96167.1| ELAV-like protein 3 [Cricetulus griseus]
Length = 352
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 155
>gi|311248628|ref|XP_003123218.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Sus
scrofa]
Length = 359
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 77
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 125 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 162
>gi|49355761|ref|NP_001411.2| ELAV-like protein 3 isoform 1 [Homo sapiens]
gi|21264436|sp|Q14576.3|ELAV3_HUMAN RecName: Full=ELAV-like protein 3; AltName: Full=Hu-antigen C;
Short=HuC; AltName: Full=Paraneoplastic cerebellar
degeneration-associated antigen; AltName:
Full=Paraneoplastic limbic encephalitis antigen 21
gi|119604626|gb|EAW84220.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu
antigen C), isoform CRA_a [Homo sapiens]
gi|380783929|gb|AFE63840.1| ELAV-like protein 3 isoform 1 [Macaca mulatta]
Length = 367
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|426387253|ref|XP_004060088.1| PREDICTED: ELAV-like protein 3 isoform 2 [Gorilla gorilla
gorilla]
Length = 366
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|444525484|gb|ELV14031.1| ELAV-like protein 3 [Tupaia chinensis]
Length = 332
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|410950486|ref|XP_003981936.1| PREDICTED: ELAV-like protein 3 isoform 1 [Felis catus]
gi|431918945|gb|ELK17812.1| ELAV-like protein 3 [Pteropus alecto]
Length = 352
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|281337375|gb|EFB12959.1| hypothetical protein PANDA_010283 [Ailuropoda melanoleuca]
Length = 369
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 30 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 75
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 123 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 160
>gi|426387255|ref|XP_004060089.1| PREDICTED: ELAV-like protein 3 isoform 3 [Gorilla gorilla
gorilla]
Length = 346
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|301771944|ref|XP_002921434.1| PREDICTED: ELAV-like protein 3-like [Ailuropoda melanoleuca]
Length = 350
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 36 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 81
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 129 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 166
>gi|344283287|ref|XP_003413403.1| PREDICTED: ELAV-like protein 3 [Loxodonta africana]
Length = 360
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|426387251|ref|XP_004060087.1| PREDICTED: ELAV-like protein 3 isoform 1 [Gorilla gorilla
gorilla]
gi|355703162|gb|EHH29653.1| Hu-antigen C [Macaca mulatta]
Length = 339
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|403302354|ref|XP_003941825.1| PREDICTED: ELAV-like protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 352
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 70
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 118 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 155
>gi|195347400|ref|XP_002040241.1| GM19036 [Drosophila sechellia]
gi|195564435|ref|XP_002105824.1| GD16475 [Drosophila simulans]
gi|194121669|gb|EDW43712.1| GM19036 [Drosophila sechellia]
gi|194203185|gb|EDX16761.1| GD16475 [Drosophila simulans]
Length = 466
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 51/68 (75%), Gaps = 6/68 (8%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG+ + S N N ++ E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 123 PNTNGNAGSGSQNGSNGST------ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 176
Query: 65 IRDKTTGE 72
IRDK+ G+
Sbjct: 177 IRDKSQGQ 184
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 223 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 265
>gi|158298951|ref|XP_319085.4| AGAP009952-PA [Anopheles gambiae str. PEST]
gi|157014134|gb|EAA13895.5| AGAP009952-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/40 (87%), Positives = 39/40 (97%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
E+SKTNLIVNYLPQ MTQEE++SLFSS+GEVESCKLIRDK
Sbjct: 23 EDSKTNLIVNYLPQQMTQEEIRSLFSSIGEVESCKLIRDK 62
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ M Q ++++LFS G + + +++ D TG
Sbjct: 127 PSSEAIKGANLYVSGLPKNMLQADLEALFSPYGRIITSRILCDNITG 173
>gi|13096196|pdb|1FXL|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The
C-Fos Rna
gi|13096204|pdb|1G2E|A Chain A, Crystal Structure Of Hud And Au-Rich Element Of The
Tumor Necrosis Factor Alpha Rna
Length = 167
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 9/72 (12%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE----- 84
SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+ L + P+
Sbjct: 1 SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKA 60
Query: 85 ---LNGLHSQTE 93
LNGL QT+
Sbjct: 61 INTLNGLRLQTK 72
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 90 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 127
>gi|14585790|gb|AAK67714.1| HUC [Homo sapiens]
Length = 360
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 40/46 (86%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGR 78
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|312380126|gb|EFR26210.1| hypothetical protein AND_07855 [Anopheles darlingi]
Length = 388
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/44 (79%), Positives = 42/44 (95%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
TPS+E ++TNLIVNYLPQTMT+EE++SLFSSVGEVES KL+RDK
Sbjct: 70 TPSSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDK 113
>gi|253722793|pdb|1D8Z|A Chain A, Solution Structure Of The First Rna-Binding Domain
(Rbd1) Of Hu Antigen C (Huc)
Length = 89
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 2 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 44
>gi|301508553|gb|ADK78238.1| ELAV2 [Schmidtea mediterranea]
Length = 411
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 7/64 (10%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
G L++ N NS ++KTNLIVNYLP MTQEE+++LFSS+G VESCKL+RDK
Sbjct: 36 GDLYDRKSNLSNSL-------DNKTNLIVNYLPPNMTQEEVRALFSSIGVVESCKLVRDK 88
Query: 69 TTGE 72
TTGE
Sbjct: 89 TTGE 92
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL + LP+ MTQ E+++LFS G++ + +++ D TG
Sbjct: 131 PSSEAIKGANLYICGLPKKMTQMELENLFSQCGKIITARILYDNKTG 177
>gi|47219575|emb|CAG02281.1| unnamed protein product [Tetraodon nigroviridis]
Length = 351
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/44 (79%), Positives = 41/44 (93%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 2 EDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 45
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 93 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 130
>gi|33356910|pdb|1FNX|H Chain H, Solution Structure Of The Huc Rbd1-Rbd2 Complexed With
The Au-Rich Element
Length = 174
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 2 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 44
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 92 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 129
>gi|395530250|ref|XP_003767210.1| PREDICTED: ELAV-like protein 4 [Sarcophilus harrisii]
Length = 707
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/76 (59%), Positives = 54/76 (71%), Gaps = 8/76 (10%)
Query: 5 PQ-QNGSLHNS----SVNSHNSAS--QT-PSNEESKTNLIVNYLPQTMTQEEMKSLFSSV 56
PQ NG N+ S NS N S QT + ++SKTNLIVNYLPQ MTQEE +SLF S+
Sbjct: 351 PQVSNGPTSNTTNGPSSNSRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSI 410
Query: 57 GEVESCKLIRDKTTGE 72
GE+ESCKL+RDK TG+
Sbjct: 411 GEIESCKLVRDKITGQ 426
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 474 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 511
>gi|157118056|ref|XP_001658986.1| hypothetical protein AaeL_AAEL008164 [Aedes aegypti]
gi|108875838|gb|EAT40063.1| AAEL008164-PA [Aedes aegypti]
Length = 363
Score = 77.4 bits (189), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/51 (68%), Positives = 44/51 (86%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
S N+A+ +E ++TNLIVNYLPQTMT+EE++SLFSSVGEVES KL+RDK
Sbjct: 19 SQNTAAAASGSETARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDK 69
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
PS+E K NL ++ LP+T+TQEE++++F GE+ + +++
Sbjct: 119 PSSEGIKGANLYISGLPKTITQEELETIFRPYGEIITSRVL 159
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 9/89 (10%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVAN 78
N+ + T S E+KTNLI+NYLP M+QEE+++LFSS+GEVESCKL+R+KT+GE L
Sbjct: 107 NNTAVTNSPPENKTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFV 166
Query: 79 SIFAP--------ELNGLHSQTERSRKSM 99
+ P LNGL Q + + S+
Sbjct: 167 KFYDPLDAGKAIKTLNGLRLQNKTVKVSL 195
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL + LP+ MTQ E++ LFS+ G + + +++ D TG
Sbjct: 198 PSSEAIKGANLYICGLPRKMTQPELEKLFSACGHIITARILYDTKTG 244
>gi|195161932|ref|XP_002021810.1| GL26299 [Drosophila persimilis]
gi|194103610|gb|EDW25653.1| GL26299 [Drosophila persimilis]
Length = 678
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 107 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TG
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITG 234
>gi|442625619|ref|NP_001259974.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
gi|440213243|gb|AGB92511.1| RNA-binding protein 9, isoform J [Drosophila melanogaster]
Length = 684
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 107 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TG
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITG 234
>gi|195384832|ref|XP_002051116.1| GJ13991 [Drosophila virilis]
gi|194147573|gb|EDW63271.1| GJ13991 [Drosophila virilis]
Length = 725
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 99 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 141
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 180 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 227
>gi|393909831|gb|EFO16801.2| RNA-binding protein [Loa loa]
Length = 414
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 53/76 (69%), Gaps = 9/76 (11%)
Query: 6 QQNGSLHNSSVN-SHNSASQTPSN--------EESKTNLIVNYLPQTMTQEEMKSLFSSV 56
QQ+ +L N + N + S+S PSN E TNLI+NYLPQ MTQEE+ +LFS++
Sbjct: 13 QQSQALSNGNSNQCYASSSMLPSNSPTLENDGEAKATNLIINYLPQNMTQEEVHALFSTL 72
Query: 57 GEVESCKLIRDKTTGE 72
GE++SCKL+RDK TG+
Sbjct: 73 GEIDSCKLVRDKVTGQ 88
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ L +TM+Q ++++LF G++ + +++ D TG
Sbjct: 127 PSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTG 173
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 116 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 158
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 197 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 244
>gi|195116106|ref|XP_002002597.1| GI11879 [Drosophila mojavensis]
gi|193913172|gb|EDW12039.1| GI11879 [Drosophila mojavensis]
Length = 724
Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 121 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 163
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 202 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 249
>gi|348504906|ref|XP_003440002.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oreochromis
niloticus]
Length = 335
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 4 MPQQNGSL-HNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
M Q+ G + + + + Q +E+++TNLIVNYLPQ+M+Q+E++SLFSSVGEVES
Sbjct: 1 MAQRRGHIRYLKELYDNGYGEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVESA 60
Query: 63 KLIRDKTTG 71
KLIRDK G
Sbjct: 61 KLIRDKVAG 69
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+T++Q++++ +FS G + + +++ D+ +G
Sbjct: 109 PSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASG 155
>gi|194758473|ref|XP_001961486.1| GF14992 [Drosophila ananassae]
gi|190615183|gb|EDV30707.1| GF14992 [Drosophila ananassae]
Length = 660
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 95 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 137
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 176 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 223
>gi|195051457|ref|XP_001993098.1| GH13638 [Drosophila grimshawi]
gi|193900157|gb|EDV99023.1| GH13638 [Drosophila grimshawi]
Length = 726
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 110 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 152
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TG
Sbjct: 191 PSSESIKGANLYVSGLPKNMTQSDLESLFSPFGKIITSRILCDNITG 237
>gi|7322081|gb|AAB25519.2| RRM9 [Drosophila melanogaster]
Length = 444
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 107 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TGE
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGE 235
>gi|19549690|ref|NP_599125.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|19549692|ref|NP_599126.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|62471589|ref|NP_001014462.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|221330652|ref|NP_476936.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|158227|gb|AAC13646.1| RNA-binding protein [Drosophila melanogaster]
gi|22945352|gb|AAN10402.1| RNA-binding protein 9, isoform E [Drosophila melanogaster]
gi|22945353|gb|AAN10403.1| RNA-binding protein 9, isoform F [Drosophila melanogaster]
gi|40714603|gb|AAR88559.1| GH26440p [Drosophila melanogaster]
gi|61678275|gb|AAX52651.1| RNA-binding protein 9, isoform G [Drosophila melanogaster]
gi|220901921|gb|AAN10401.3| RNA-binding protein 9, isoform H [Drosophila melanogaster]
gi|220951536|gb|ACL88311.1| Rbp9-PE [synthetic construct]
Length = 439
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 107 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TG
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITG 234
>gi|195434178|ref|XP_002065080.1| GK14865 [Drosophila willistoni]
gi|194161165|gb|EDW76066.1| GK14865 [Drosophila willistoni]
Length = 725
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 118 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 160
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 199 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 246
>gi|348504908|ref|XP_003440003.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oreochromis
niloticus]
Length = 361
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 2 DAMPQQNGSLHN-SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
DA G+ N S + + Q +E+++TNLIVNYLPQ+M+Q+E++SLFSSVGEVE
Sbjct: 25 DASLAAKGAAGNVSELYDNGYGEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVE 84
Query: 61 SCKLIRDKTTG 71
S KLIRDK G
Sbjct: 85 SAKLIRDKVAG 95
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+T++Q++++ +FS G + + +++ D+ +G
Sbjct: 135 PSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASG 181
>gi|195470919|ref|XP_002087754.1| GE18193 [Drosophila yakuba]
gi|194173855|gb|EDW87466.1| GE18193 [Drosophila yakuba]
Length = 446
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 109 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 151
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 190 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 237
>gi|19549688|ref|NP_599124.1| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|19549694|ref|NP_599127.1| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|221330653|ref|NP_476937.3| RNA-binding protein 9, isoform I [Drosophila melanogaster]
gi|158226|gb|AAC13645.1| RNA-binding protein [Drosophila melanogaster]
gi|22945349|gb|AAF51177.2| RNA-binding protein 9, isoform B [Drosophila melanogaster]
gi|22945350|gb|AAF51178.2| RNA-binding protein 9, isoform C [Drosophila melanogaster]
gi|220901922|gb|AAF51179.4| RNA-binding protein 9, isoform I [Drosophila melanogaster]
Length = 444
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 107 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 235
>gi|348504910|ref|XP_003440004.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oreochromis
niloticus]
Length = 369
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 2 DAMPQQNGSLHN-SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
DA G+ N S + + Q +E+++TNLIVNYLPQ+M+Q+E++SLFSSVGEVE
Sbjct: 25 DASLAAKGAAGNVSELYDNGYGEQMMEDEDARTNLIVNYLPQSMSQDELRSLFSSVGEVE 84
Query: 61 SCKLIRDKTTG 71
S KLIRDK G
Sbjct: 85 SAKLIRDKVAG 95
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+T++Q++++ +FS G + + +++ D+ +G
Sbjct: 143 PSSDAIKDANLYISGLPRTLSQQDVEDMFSHYGRIINSRVLVDQASG 189
>gi|194855197|ref|XP_001968493.1| GG24901 [Drosophila erecta]
gi|190660360|gb|EDV57552.1| GG24901 [Drosophila erecta]
Length = 446
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 109 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 151
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 190 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 237
>gi|195576197|ref|XP_002077963.1| GD23195 [Drosophila simulans]
gi|194189972|gb|EDX03548.1| GD23195 [Drosophila simulans]
Length = 464
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 312 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 354
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 393 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 440
>gi|124248380|gb|ABM92810.1| IP15810p [Drosophila melanogaster]
Length = 647
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 310 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 352
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 391 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 438
>gi|195342135|ref|XP_002037657.1| GM18380 [Drosophila sechellia]
gi|194132507|gb|EDW54075.1| GM18380 [Drosophila sechellia]
Length = 650
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/43 (76%), Positives = 39/43 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 313 DPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 355
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D T E
Sbjct: 394 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDE 441
>gi|62473376|ref|NP_001014713.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|221329608|ref|NP_001138142.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
gi|2961399|emb|CAA18091.1| EG:65F1.2 [Drosophila melanogaster]
gi|61677860|gb|AAX52472.1| embryonic lethal abnormal vision, isoform B [Drosophila
melanogaster]
gi|220901638|gb|ACL82875.1| embryonic lethal abnormal vision, isoform C [Drosophila
melanogaster]
Length = 479
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 6/65 (9%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG+ + S N N ++ E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 123 PNTNGNAGSGSQNGSNGST------ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 176
Query: 65 IRDKT 69
IRDK+
Sbjct: 177 IRDKS 181
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 236 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 278
>gi|195469519|ref|XP_002099685.1| GE16581 [Drosophila yakuba]
gi|194187209|gb|EDX00793.1| GE16581 [Drosophila yakuba]
Length = 478
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 6/65 (9%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG+ + S N N ++ E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 122 PNTNGNAGSGSQNGSNGST------ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 175
Query: 65 IRDKT 69
IRDK+
Sbjct: 176 IRDKS 180
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 235 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 277
>gi|194768871|ref|XP_001966534.1| GF22224 [Drosophila ananassae]
gi|190617298|gb|EDV32822.1| GF22224 [Drosophila ananassae]
Length = 490
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ASQ SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 138 NGSGGASQNGSNGSSETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 192
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 247 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 289
>gi|18079265|ref|NP_525033.1| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|386763527|ref|NP_001245447.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
gi|119264|sp|P16914.1|ELAV_DROME RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157340|gb|AAA28506.1| elav protein [Drosophila melanogaster]
gi|4455922|emb|CAB37430.1| EG:65F1.2 [Drosophila melanogaster]
gi|15291955|gb|AAK93246.1| LD33076p [Drosophila melanogaster]
gi|22831422|gb|AAF45517.2| embryonic lethal abnormal vision, isoform A [Drosophila
melanogaster]
gi|220946076|gb|ACL85581.1| elav-PA [synthetic construct]
gi|220955740|gb|ACL90413.1| elav-PA [synthetic construct]
gi|383293116|gb|AFH07163.1| embryonic lethal abnormal vision, isoform D [Drosophila
melanogaster]
Length = 483
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 6/65 (9%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG+ + S N N ++ E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 127 PNTNGNAGSGSQNGSNGST------ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 180
Query: 65 IRDKT 69
IRDK+
Sbjct: 181 IRDKS 185
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 240 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 282
>gi|358334522|dbj|GAA52985.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 217
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 14/86 (16%)
Query: 9 GSLHNS--SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
G++++S S S N SQ E++TNLIVNYLPQ MTQEE++SLF+++GEV+SCKLIR
Sbjct: 129 GNVYDSEDSSKSDNDVSQ-----ENRTNLIVNYLPQNMTQEEIRSLFATIGEVDSCKLIR 183
Query: 67 DKTTGELSVVA-------NSIFAPEL 85
DK T + S A + IF EL
Sbjct: 184 DKNTSKHSDFALCEKDDLDIIFGNEL 209
>gi|410928269|ref|XP_003977523.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Takifugu rubripes]
Length = 334
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +E+++TNLIVNYLPQ+M+QEE++SLFSSVG+VES KLIRDK G
Sbjct: 22 QLMEDEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAG 69
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+T +Q++++ +FS G + + +++ D+ +G
Sbjct: 109 PSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASG 155
>gi|410928271|ref|XP_003977524.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Takifugu rubripes]
Length = 358
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +E+++TNLIVNYLPQ+M+QEE++SLFSSVG+VES KLIRDK G
Sbjct: 46 QLMEDEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAG 93
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+T +Q++++ +FS G + + +++ D+ +G
Sbjct: 133 PSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASG 179
>gi|410928273|ref|XP_003977525.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Takifugu rubripes]
Length = 368
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +E+++TNLIVNYLPQ+M+QEE++SLFSSVG+VES KLIRDK G
Sbjct: 46 QLMEDEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAG 93
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+T +Q++++ +FS G + + +++ D+ +G
Sbjct: 143 PSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASG 189
>gi|47210814|emb|CAF92867.1| unnamed protein product [Tetraodon nigroviridis]
Length = 447
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +E+++TNLIVNYLPQ+M+QEE++SLFSSVG+VES KLIRDK G
Sbjct: 46 QLMEDEDARTNLIVNYLPQSMSQEELRSLFSSVGDVESAKLIRDKVAG 93
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+T +Q++++ +FS G + + +++ D+ +G
Sbjct: 216 PSSEMIKDANLYISGLPRTASQQDLEDMFSHYGRIINSRVLVDQASG 262
>gi|335308348|ref|XP_003361195.1| PREDICTED: ELAV-like protein 4-like [Sus scrofa]
Length = 148
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 39/44 (88%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK T
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKIT 88
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 43/46 (93%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++ +SKTNLI+NYLPQ+MT+EE++SLF+ VG+++SCKL+RD+ TG+
Sbjct: 497 TSSDSKTNLIINYLPQSMTEEELRSLFARVGKIQSCKLVRDRVTGQ 542
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL +N LP+ MTQ+E++ LFS G + + +++ DK +G
Sbjct: 590 NLYINGLPKNMTQKELEHLFSPYGHIITSRILTDKASG 627
>gi|432853220|ref|XP_004067599.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Oryzias latipes]
Length = 335
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +++++TNLIVNYLPQ+MTQ+E++SLFSSVGEVES KLIRDK G
Sbjct: 22 QMMEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAG 69
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+T+ Q++++ +F+S G + + +++ D+ +G
Sbjct: 109 PSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASG 155
>gi|432853218|ref|XP_004067598.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Oryzias latipes]
Length = 356
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +++++TNLIVNYLPQ+MTQ+E++SLFSSVGEVES KLIRDK G
Sbjct: 43 QMMEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAG 90
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+T+ Q++++ +F+S G + + +++ D+ +G
Sbjct: 130 PSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASG 176
>gi|432853222|ref|XP_004067600.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Oryzias latipes]
Length = 346
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q +++++TNLIVNYLPQ+MTQ+E++SLFSSVGEVES KLIRDK G
Sbjct: 22 QMMEDDDAQTNLIVNYLPQSMTQDELRSLFSSVGEVESAKLIRDKVAG 69
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVAN 78
PS++ K NL ++ LP+T+ Q++++ +F+S G + + +++ D+ +G + N
Sbjct: 109 PSSDTIKDANLYISGLPRTLGQQDLEDMFASFGRIINSRVLVDQASGTSGDICN 162
>gi|124388985|gb|ABN10621.1| elav [Drosophila recens]
Length = 401
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 78 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 135
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 190 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 232
>gi|124388947|gb|ABN10602.1| elav [Drosophila recens]
gi|124388971|gb|ABN10614.1| elav [Drosophila recens]
gi|124389005|gb|ABN10631.1| elav [Drosophila recens]
gi|124389007|gb|ABN10632.1| elav [Drosophila recens]
gi|124389009|gb|ABN10633.1| elav [Drosophila recens]
gi|124389011|gb|ABN10634.1| elav [Drosophila recens]
gi|124389013|gb|ABN10635.1| elav [Drosophila recens]
gi|124389015|gb|ABN10636.1| elav [Drosophila recens]
gi|124389017|gb|ABN10637.1| elav [Drosophila recens]
gi|124389019|gb|ABN10638.1| elav [Drosophila recens]
gi|124389021|gb|ABN10639.1| elav [Drosophila recens]
gi|124389023|gb|ABN10640.1| elav [Drosophila recens]
gi|124389025|gb|ABN10641.1| elav [Drosophila recens]
gi|124389027|gb|ABN10642.1| elav [Drosophila recens]
gi|124389029|gb|ABN10643.1| elav [Drosophila recens]
gi|124389031|gb|ABN10644.1| elav [Drosophila recens]
Length = 401
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 78 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 135
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 190 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 232
>gi|124388951|gb|ABN10604.1| elav [Drosophila recens]
Length = 400
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 77 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 134
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 189 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 231
>gi|124388979|gb|ABN10618.1| elav [Drosophila recens]
gi|124388981|gb|ABN10619.1| elav [Drosophila recens]
gi|124389003|gb|ABN10630.1| elav [Drosophila recens]
Length = 401
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 78 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 135
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 190 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 232
>gi|124388963|gb|ABN10610.1| elav [Drosophila recens]
Length = 400
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 77 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 134
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 189 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 231
>gi|124388957|gb|ABN10607.1| elav [Drosophila recens]
gi|124388977|gb|ABN10617.1| elav [Drosophila recens]
gi|124388991|gb|ABN10624.1| elav [Drosophila recens]
Length = 403
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 80 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 137
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 192 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 234
>gi|124388959|gb|ABN10608.1| elav [Drosophila recens]
Length = 398
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 75 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 132
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 187 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 229
>gi|124389033|gb|ABN10645.1| elav [Drosophila subquinaria]
Length = 405
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 82 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 139
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 194 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 236
>gi|124388953|gb|ABN10605.1| elav [Drosophila recens]
Length = 401
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 78 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 135
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 190 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 232
>gi|124388961|gb|ABN10609.1| elav [Drosophila recens]
Length = 400
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 77 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 134
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 189 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 231
>gi|124388983|gb|ABN10620.1| elav [Drosophila recens]
gi|124388999|gb|ABN10628.1| elav [Drosophila recens]
Length = 404
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 81 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 138
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 193 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 235
>gi|124388967|gb|ABN10612.1| elav [Drosophila recens]
gi|124388993|gb|ABN10625.1| elav [Drosophila recens]
Length = 399
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 76 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 133
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 188 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 230
>gi|124388997|gb|ABN10627.1| elav [Drosophila recens]
Length = 403
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 80 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 137
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 192 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 234
>gi|124388955|gb|ABN10606.1| elav [Drosophila recens]
gi|124388965|gb|ABN10611.1| elav [Drosophila recens]
gi|124388973|gb|ABN10615.1| elav [Drosophila recens]
Length = 397
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 74 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 131
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 186 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 228
>gi|124388987|gb|ABN10622.1| elav [Drosophila recens]
Length = 402
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 79 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 136
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 191 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 233
>gi|124388969|gb|ABN10613.1| elav [Drosophila recens]
gi|124388975|gb|ABN10616.1| elav [Drosophila recens]
gi|124388989|gb|ABN10623.1| elav [Drosophila recens]
gi|124389001|gb|ABN10629.1| elav [Drosophila recens]
Length = 402
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 79 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 136
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 191 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 233
>gi|124388949|gb|ABN10603.1| elav [Drosophila recens]
Length = 389
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 66 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 123
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 178 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 220
>gi|124388995|gb|ABN10626.1| elav [Drosophila recens]
Length = 403
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 14 SSVNSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 80 SNTNGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 137
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 192 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 234
>gi|348510833|ref|XP_003442949.1| PREDICTED: ELAV-like protein 1-like [Oreochromis niloticus]
Length = 341
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 31 KDAKTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 73
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS++ K NL ++ LP+ MTQ++++ +FS G + + +++ D+ TG VA
Sbjct: 113 PSSDTIKDANLYISGLPKNMTQKDVEDMFSRYGRIINSRVLVDQGTGSSRGVA 165
>gi|390360288|ref|XP_003729672.1| PREDICTED: ELAV-like protein 2-like [Strongylocentrotus
purpuratus]
Length = 385
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+E+SKTNLIVNYLPQ M Q+EMKSLF GE+ESCKL+RDK TG+
Sbjct: 33 DEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQ 77
>gi|170591004|ref|XP_001900261.1| RNA-binding protein [Brugia malayi]
gi|158592411|gb|EDP31011.1| RNA-binding protein, putative [Brugia malayi]
Length = 417
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 8/62 (12%)
Query: 19 HNSASQTPSN--------EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ S+S PSN E TNLI+NYLPQ MTQEE+ +LFS++GE++SCKL+RDK T
Sbjct: 27 YASSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVT 86
Query: 71 GE 72
G+
Sbjct: 87 GQ 88
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ L +TM+Q ++++LF G++ + +++ D TG
Sbjct: 127 PSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTG 173
>gi|432099588|gb|ELK28729.1| ELAV-like protein 4 [Myotis davidii]
Length = 405
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG
Sbjct: 25 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG 69
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 191 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 228
>gi|349931692|dbj|GAA40288.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 941
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 38/41 (92%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
KTNLIVNYLP M+QEE+K+LFSS+GEVESCKL+R+K TGE
Sbjct: 361 KTNLIVNYLPPFMSQEEVKALFSSIGEVESCKLVREKATGE 401
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL + LP+ MTQ E++ LF G + + +++ D TG
Sbjct: 440 PSSESIKGANLYICGLPKKMTQTELEDLFKQCGRIITARILYDNKTG 486
>gi|115666403|ref|XP_802063.2| PREDICTED: ELAV-like protein 2-like isoform 7 [Strongylocentrotus
purpuratus]
Length = 367
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+E+SKTNLIVNYLPQ M Q+EMKSLF GE+ESCKL+RDK TG+
Sbjct: 33 DEDSKTNLIVNYLPQNMAQDEMKSLFGKFGEIESCKLVRDKLTGQ 77
>gi|195402031|ref|XP_002059614.1| embryonic lethal, abnormal vision [Drosophila virilis]
gi|194147321|gb|EDW63036.1| embryonic lethal, abnormal vision [Drosophila virilis]
Length = 516
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 164 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 218
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 273 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 315
>gi|49658982|emb|CAE01482.1| HUR [Tetraodon nigroviridis]
Length = 325
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ M+QEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 KDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKVAG 57
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP++MTQ++++ +FS G + + +++ D+ TG
Sbjct: 97 PSSDTIKDANLYISGLPKSMTQKDVEDMFSQFGRIINSRVLVDQATG 143
>gi|195130285|ref|XP_002009582.1| GI15436 [Drosophila mojavensis]
gi|193908032|gb|EDW06899.1| GI15436 [Drosophila mojavensis]
Length = 475
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 123 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 177
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 232 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 274
>gi|195042014|ref|XP_001991348.1| GH12602 [Drosophila grimshawi]
gi|193901106|gb|EDV99972.1| GH12602 [Drosophila grimshawi]
Length = 511
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N + +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 159 NGNTGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 213
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 268 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 310
>gi|119265|sp|P23241.1|ELAV_DROVI RecName: Full=Protein elav; AltName: Full=Embryonic lethal abnormal
visual protein
gi|157338|gb|AAA28505.1| ELAV [Drosophila virilis]
Length = 519
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 167 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 221
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 276 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 318
>gi|410927510|ref|XP_003977185.1| PREDICTED: ELAV-like protein 1-like [Takifugu rubripes]
Length = 341
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ M+QEE++SLFSS+GEVES KLIRDK G
Sbjct: 31 KDAKTNLIVNYLPQNMSQEELRSLFSSIGEVESAKLIRDKIAG 73
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS++ K NL ++ LP++MTQ++++ +FS G + + +++ D+ TG VA
Sbjct: 113 PSSDTIKDANLYISGLPKSMTQKDVEDMFSRFGRIINSRVLVDQATGASRGVA 165
>gi|338727192|ref|XP_001916382.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3-like [Equus
caballus]
Length = 345
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 36 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 81
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 129 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 166
>gi|402587503|gb|EJW81438.1| hypothetical protein WUBG_07656, partial [Wuchereria bancrofti]
Length = 337
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 45/62 (72%), Gaps = 8/62 (12%)
Query: 19 HNSASQTPSN--------EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ S+S PSN E TNLI+NYLPQ MTQEE+ +LFS++GE++SCKL+RDK T
Sbjct: 63 YASSSMLPSNSPILESDGEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVT 122
Query: 71 GE 72
G+
Sbjct: 123 GQ 124
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ L +TM+Q ++++LF G++ + +++ D TG
Sbjct: 163 PSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTG 209
>gi|225706444|gb|ACO09068.1| ELAV-like protein 1 [Osmerus mordax]
Length = 374
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 39/44 (88%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ+MTQ+E++SLF S+GEVES KLIRDK G
Sbjct: 30 GKDAKTNLIVNYLPQSMTQDELRSLFCSIGEVESAKLIRDKVAG 73
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ++++ +F+ G + + +++ D+ +G
Sbjct: 113 PSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASG 159
>gi|156536405|gb|ABU80357.1| embryonic lethal abnormal vision [Drosophila montana]
Length = 346
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 101 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 155
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 210 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 252
>gi|156536403|gb|ABU80356.1| embryonic lethal abnormal vision [Drosophila littoralis]
Length = 334
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 89 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 143
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 198 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 240
>gi|57231478|gb|AAW47452.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 89 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 143
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 198 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 240
>gi|57231504|gb|AAW47465.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 334
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 89 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 143
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 198 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 240
>gi|57231496|gb|AAW47461.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 333
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 88 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 142
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 197 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 239
>gi|57231470|gb|AAW47448.1| embryonic lethal abnormal vision protein [Drosophila virilis]
Length = 345
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 100 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 154
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 209 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 251
>gi|57231538|gb|AAW47482.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 340
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 95 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 149
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 204 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 246
>gi|57231546|gb|AAW47486.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 326
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 81 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 135
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 190 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 232
>gi|57231572|gb|AAW47499.1| embryonic lethal abnormal vision protein [Drosophila ezoana]
Length = 343
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 98 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 152
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 207 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 249
>gi|57231474|gb|AAW47450.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231476|gb|AAW47451.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231480|gb|AAW47453.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231484|gb|AAW47455.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231486|gb|AAW47456.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231488|gb|AAW47457.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231490|gb|AAW47458.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231492|gb|AAW47459.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231494|gb|AAW47460.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231498|gb|AAW47462.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231500|gb|AAW47463.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231502|gb|AAW47464.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231506|gb|AAW47466.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231508|gb|AAW47467.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231510|gb|AAW47468.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231514|gb|AAW47470.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231516|gb|AAW47471.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231518|gb|AAW47472.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231520|gb|AAW47473.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231522|gb|AAW47474.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231524|gb|AAW47475.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231526|gb|AAW47476.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231530|gb|AAW47478.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231532|gb|AAW47479.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231534|gb|AAW47480.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231540|gb|AAW47483.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231542|gb|AAW47484.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231544|gb|AAW47485.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231548|gb|AAW47487.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231550|gb|AAW47488.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231552|gb|AAW47489.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231554|gb|AAW47490.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231556|gb|AAW47491.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231560|gb|AAW47493.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231562|gb|AAW47494.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231564|gb|AAW47495.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231568|gb|AAW47497.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 337
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 92 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 146
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 201 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 243
>gi|57231472|gb|AAW47449.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231482|gb|AAW47454.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231512|gb|AAW47469.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231528|gb|AAW47477.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231536|gb|AAW47481.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231558|gb|AAW47492.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231566|gb|AAW47496.1| embryonic lethal abnormal vision protein [Drosophila americana]
gi|57231570|gb|AAW47498.1| embryonic lethal abnormal vision protein [Drosophila americana]
Length = 338
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N ++ +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 93 NGNSGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 147
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 202 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 244
>gi|18858613|ref|NP_571527.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Danio rerio]
gi|6694223|gb|AAF25187.1|AF184244_1 ribonucleoprotein [Danio rerio]
Length = 324
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+SKTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 56
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ++++ +F G + + +++ D+ +G
Sbjct: 96 PSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASG 142
>gi|28279908|gb|AAH44184.1| Elavl1 protein [Danio rerio]
Length = 324
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+SKTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 56
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ++++ +F G + + +++ D+ +G
Sbjct: 96 PSSDSIKDANLYISGLPKTMTQKDVEEMFGRYGRIINSRVLVDQASG 142
>gi|431093|gb|AAA58677.1| huc [Homo sapiens]
Length = 359
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG 77
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 126 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
>gi|542846|pir||JC2116 hippocampal 38K autoantigen protein - human
gi|2340828|dbj|BAA21838.1| PLE21 protein [Homo sapiens]
Length = 350
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 24 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 69
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 154
>gi|296485880|tpg|DAA27995.1| TPA: ELAV-like protein 3-like [Bos taurus]
Length = 407
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 80 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 125
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 173 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 210
>gi|359067089|ref|XP_002688919.2| PREDICTED: ELAV-like protein 3 [Bos taurus]
Length = 408
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 81 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 126
Score = 39.3 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 174 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 211
>gi|209155462|gb|ACI33963.1| ELAV-like protein 1 [Salmo salar]
Length = 342
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 39/42 (92%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++KTNLIVNYLPQ+M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 33 DAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAG 74
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ++++ +F+ G + + +++ D+ +G
Sbjct: 114 PSSDTIKDANLYISGLPKTMTQKDVEDMFARYGRIINSRVLVDQASG 160
>gi|410053240|ref|XP_003316137.2| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 3 [Pan
troglodytes]
Length = 447
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/45 (71%), Positives = 40/45 (88%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG
Sbjct: 149 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITG 193
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 242 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 279
>gi|432936678|ref|XP_004082225.1| PREDICTED: ELAV-like protein 1-like [Oryzias latipes]
Length = 342
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 40/43 (93%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ+M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 32 KDAKTNLIVNYLPQSMSQDELRSLFSSIGEVESAKLIRDKVAG 74
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+ MTQ++++ +FS G + + +++ D++TG
Sbjct: 114 PSSDTIKDANLYISGLPKNMTQKDVEDMFSCYGRIINSRVLVDQSTG 160
>gi|74138233|dbj|BAE28602.1| unnamed protein product [Mus musculus]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|26344670|dbj|BAC35984.1| unnamed protein product [Mus musculus]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|26330019|dbj|BAC28748.1| unnamed protein product [Mus musculus]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|297632376|ref|NP_001172077.1| ELAV-like protein 1 [Oryctolagus cuniculus]
gi|296399062|gb|ADH10369.1| embryonic lethal abnormal vision-like 1 protein [Oryctolagus
cuniculus]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|195439330|ref|XP_002067584.1| GK16120 [Drosophila willistoni]
gi|194163669|gb|EDW78570.1| GK16120 [Drosophila willistoni]
Length = 509
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 45/55 (81%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N + +Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 157 NGNAGGAQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 211
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++S+F+ G + + +++++
Sbjct: 266 PSSDAIKGANLYVSGLPKTMTQQELESIFAPFGAIITSRILQN 308
>gi|31542602|ref|NP_034615.2| ELAV-like protein 1 [Mus musculus]
gi|157818153|ref|NP_001102318.1| ELAV-like protein 1 [Rattus norvegicus]
gi|354488231|ref|XP_003506274.1| PREDICTED: ELAV-like protein 1 [Cricetulus griseus]
gi|341940489|sp|P70372.2|ELAV1_MOUSE RecName: Full=ELAV-like protein 1; AltName: Full=Elav-like
generic protein; AltName: Full=Hu-antigen R; Short=HuR;
AltName: Full=MelG
gi|26348505|dbj|BAC37892.1| unnamed protein product [Mus musculus]
gi|83308037|emb|CAI77902.1| HuR RNA binding protein [Spalax judaei]
gi|148690049|gb|EDL21996.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|148690050|gb|EDL21997.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Mus musculus]
gi|149015619|gb|EDL75000.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149015620|gb|EDL75001.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) (predicted), isoform CRA_a [Rattus
norvegicus]
gi|197245826|gb|AAI68972.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Rattus norvegicus]
gi|208609536|dbj|BAG72208.1| HuR [Rattus norvegicus]
Length = 326
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|45382281|ref|NP_990163.1| RNA-binding protein HuC [Gallus gallus]
gi|5738251|gb|AAD50314.1|AF176674_1 RNA-binding protein HuC [Gallus gallus]
Length = 365
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/44 (68%), Positives = 41/44 (93%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++SKTNLIVNYLPQ M+Q+E++SLF S+G++ESCKL+RDK TG+
Sbjct: 46 DDSKTNLIVNYLPQNMSQDELRSLFGSLGDIESCKLVRDKVTGQ 89
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+ M Q+EM+ LFS G + + +++ D+ TG
Sbjct: 137 NLYVSGLPKAMGQKEMEQLFSQYGRIITSRILVDQVTG 174
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P + + +S +S + + + + KTNLIVNYLPQ+MTQEE +LF++VG+++SCKL
Sbjct: 157 PIETPGVAGASTSSATTEPASSGSSDPKTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKL 216
Query: 65 IRDKTTGE 72
+RD++TG+
Sbjct: 217 VRDRSTGQ 224
>gi|344247291|gb|EGW03395.1| ELAV-like protein 1 [Cricetulus griseus]
Length = 335
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 7 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 50
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 90 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 136
>gi|358412972|ref|XP_887465.4| PREDICTED: ELAV-like protein 3 isoform 8 [Bos taurus]
Length = 511
Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 184 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 229
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 277 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 314
>gi|209152513|gb|ACI33116.1| ELAV-like protein 1 [Salmo salar]
Length = 374
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 55 KDAKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 97
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ++++ +F+ G + + +++ D+ +G
Sbjct: 145 PSSDGIKDANLYISGLPKTMTQKDVEDMFTRYGRIINSRVLVDQASG 191
>gi|170044495|ref|XP_001849881.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167867621|gb|EDS31004.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 393
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
N+ + + ++ ++TNLIVNYLPQTMT+EE++SLFSSVGEVES KL+RDK
Sbjct: 56 QNTTAASSGSDNARTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDK 105
>gi|209735406|gb|ACI68572.1| ELAV-like protein 1 [Salmo salar]
gi|303665455|gb|ADM16186.1| ELAV-like protein 1 [Salmo salar]
Length = 154
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++SKTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 55 KDSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 97
>gi|195165322|ref|XP_002023488.1| GL20165 [Drosophila persimilis]
gi|194105593|gb|EDW27636.1| GL20165 [Drosophila persimilis]
Length = 496
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG N+ V + S T E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 141 PNTNG---NAGVPQNGSNGST----ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 193
Query: 65 IRDKT 69
IRDK+
Sbjct: 194 IRDKS 198
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 253 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 295
>gi|198468704|ref|XP_001354795.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
gi|198146532|gb|EAL31850.2| GA18065 [Drosophila pseudoobscura pseudoobscura]
Length = 496
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 7/65 (10%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P NG N+ V + S T E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KL
Sbjct: 141 PNTNG---NAGVPQNGSNGST----ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKL 193
Query: 65 IRDKT 69
IRDK+
Sbjct: 194 IRDKS 198
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
PS++ K NL V+ LP+TMTQ+E++++F+ G + + +++++
Sbjct: 253 PSSDAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQN 295
>gi|1655901|gb|AAB17967.1| elav G homolog [Mus musculus]
Length = 326
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/41 (78%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|347966748|ref|XP_321180.5| AGAP001883-PA [Anopheles gambiae str. PEST]
gi|333469916|gb|EAA01735.5| AGAP001883-PA [Anopheles gambiae str. PEST]
Length = 396
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/42 (78%), Positives = 39/42 (92%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
S+ S+TNLIVNYLPQTMT+EE++SLFSSVGEVES KL+RDK
Sbjct: 68 SDNNSRTNLIVNYLPQTMTEEEIRSLFSSVGEVESVKLVRDK 109
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCK-LIRD 67
PS+E K NL ++ LP+T+TQEE++++F GE+ + + LI+D
Sbjct: 159 PSSEGIKGANLYISGLPKTITQEELETIFRPYGEIITSRVLIQD 202
>gi|18858877|ref|NP_570984.1| ELAV-like protein 1 [Danio rerio]
gi|6694225|gb|AAF25188.1|AF184245_1 ribonucleoprotein [Danio rerio]
Length = 322
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++KTNLI+NYLPQ M+QEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAG 56
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS++ K NL ++ LP+TMTQ+ ++ +F+ G + + +++ D+ +G
Sbjct: 96 PSSDGIKDANLYISGLPKTMTQKNVEDMFTQYGRIINSRILVDQASG 142
>gi|355685803|gb|AER97853.1| ELAV-like protein 1 [Mustela putorius furo]
Length = 343
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 49/70 (70%), Gaps = 1/70 (1%)
Query: 3 AMPQQNGSLHNSSVNSH-NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
A P + L N+ N + + ++ ++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES
Sbjct: 7 ARPPASRFLKNTMSNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVES 66
Query: 62 CKLIRDKTTG 71
KLIRDK G
Sbjct: 67 AKLIRDKVAG 76
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 116 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 162
>gi|305855162|ref|NP_001182263.1| ELAV-like protein 1 [Sus scrofa]
gi|285818484|gb|ADC38915.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 [Sus
scrofa]
gi|456753432|gb|JAA74168.1| ELAV-like 1 (Hu antigen R) [Sus scrofa]
Length = 326
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQEE++SLFSS+GE+ES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAG 58
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTG 144
>gi|441628930|ref|XP_003275701.2| PREDICTED: ELAV-like protein 3 [Nomascus leucogenys]
Length = 364
Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 149 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 194
>gi|312092240|ref|XP_003147268.1| RNA-binding protein [Loa loa]
Length = 383
Score = 72.8 bits (177), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E TNLI+NYLPQ MTQEE+ +LFS++GE++SCKL+RDK TG+
Sbjct: 13 GEAKATNLIINYLPQNMTQEEVHALFSTLGEIDSCKLVRDKVTGQ 57
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ L +TM+Q ++++LF G++ + +++ D TG
Sbjct: 96 PSSESIKGANLYVSGLAKTMSQLDLEALFKPFGQIITSRILSDNVTG 142
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 3 AMPQQNGSLHNSSVNSH-NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
A P + L N+ N + + ++ + +TNLIVNYLPQ MTQ+E++SLFSS+GEVES
Sbjct: 108 ARPPASRFLKNTMSNGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVES 167
Query: 62 CKLIRDKTTG 71
KLIRDK G
Sbjct: 168 AKLIRDKVAG 177
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 217 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 263
>gi|301773130|ref|XP_002921959.1| PREDICTED: ELAV-like protein 1-like isoform 3 [Ailuropoda
melanoleuca]
Length = 339
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|388326834|pdb|4ED5|A Chain A, Crystal Structure Of The Two N-Terminal Rrm Domains Of
Hur Complexed With Rna
gi|388326835|pdb|4ED5|B Chain B, Crystal Structure Of The Two N-Terminal Rrm Domains Of
Hur Complexed With Rna
Length = 177
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 41
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 81 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 127
>gi|388604324|pdb|4EGL|A Chain A, Crystal Structure Of Two Tandem Rna Recognition Motifs
Of Human Antigen R
Length = 177
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 2 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 41
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 81 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 127
>gi|53749734|ref|NP_001005461.1| ELAV-like protein 1 [Xenopus (Silurana) tropicalis]
gi|82236379|sp|Q6GLB5.1|ELAV1_XENTR RecName: Full=ELAV-like protein 1; AltName: Full=Protein ElrA
gi|49250885|gb|AAH74585.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Xenopus (Silurana) tropicalis]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +F G + + +++ D+ TG
Sbjct: 98 PSSESIKDANLYISGLPRTMTQKDVEDMFLPFGRIINSRVLVDQATG 144
>gi|608537|gb|AAA96942.1| ribonucleoprotein [Xenopus laevis]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +F G + + +++ D+ TG
Sbjct: 98 PSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATG 144
>gi|431900165|gb|ELK08079.1| ELAV-like protein 1 [Pteropus alecto]
Length = 401
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 7 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 50
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TT
Sbjct: 90 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTT 135
>gi|292659621|pdb|3HI9|A Chain A, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659622|pdb|3HI9|B Chain B, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659623|pdb|3HI9|C Chain C, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
gi|292659624|pdb|3HI9|D Chain D, The X-Ray Crystal Structure Of The First Rna Recognition
Motif (Rrm1) Of The Au-Rich Element (Are) Binding
Protein Hur At 2.0 Angstrom Resolution
Length = 84
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 3 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 43
>gi|148237069|ref|NP_001084078.1| ELAV-like protein 1-A [Xenopus laevis]
gi|123909821|sp|Q1JQ73.1|ELV1A_XENLA RecName: Full=ELAV-like protein 1-A; AltName: Full=36 kDa
embryonic-type cytoplasmic polyadenylation
element-binding protein; Short=36 kDa eCPE-binding
protein; Short=36 kDa eCPEB; Short=p36; AltName:
Full=Protein ElrA-A; Short=ElrA
gi|94574290|gb|AAI16460.1| ElrA protein [Xenopus laevis]
Length = 337
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +F G + + +++ D+ TG
Sbjct: 109 PSSESIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATG 155
>gi|358253025|dbj|GAA51417.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 290
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+++TNLIVNYLPQTMTQEEM+++FS +G++ SCKLIRD+T+G+
Sbjct: 61 DNQTNLIVNYLPQTMTQEEMRTMFSKIGKLTSCKLIRDRTSGQ 103
>gi|115497832|ref|NP_001069922.1| ELAV-like protein 1 [Bos taurus]
gi|261244966|ref|NP_001159666.1| ELAV-like protein 1 [Ovis aries]
gi|73587279|gb|AAI02496.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Bos taurus]
gi|256665397|gb|ACV04844.1| ELAV-like protein 1 [Ovis aries]
gi|296485836|tpg|DAA27951.1| TPA: ELAV-like 1 (Hu antigen R) [Bos taurus]
Length = 326
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+ MTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|345787182|ref|XP_542056.3| PREDICTED: ELAV-like protein 3 [Canis lupus familiaris]
Length = 647
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 320 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 365
Score = 38.9 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 413 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 450
>gi|126323791|ref|XP_001366151.1| PREDICTED: ELAV-like protein 1 [Monodelphis domestica]
Length = 326
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|73986922|ref|XP_854218.1| PREDICTED: ELAV-like protein 1 isoform 1 [Canis lupus familiaris]
gi|301773126|ref|XP_002921957.1| PREDICTED: ELAV-like protein 1-like isoform 1 [Ailuropoda
melanoleuca]
gi|344299314|ref|XP_003421331.1| PREDICTED: ELAV-like protein 1 [Loxodonta africana]
gi|281349989|gb|EFB25573.1| hypothetical protein PANDA_010904 [Ailuropoda melanoleuca]
Length = 326
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|149716413|ref|XP_001497933.1| PREDICTED: ELAV-like protein 1 [Equus caballus]
Length = 326
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|73965401|ref|XP_537585.2| PREDICTED: ELAV-like protein 1-like [Canis lupus familiaris]
Length = 326
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ FS + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDTFSRFWRIINSRVLVDQTTG 144
>gi|238231437|ref|NP_001154136.1| ELAV-like protein 1 [Oncorhynchus mykiss]
gi|225704302|gb|ACO07997.1| ELAV-like protein 1 [Oncorhynchus mykiss]
Length = 126
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 39/43 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++KTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 55 KDAKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 97
>gi|45382283|ref|NP_990164.1| ELAV-like protein 1 [Gallus gallus]
gi|5738249|gb|AAD50313.1|AF176673_1 RNA-binding protein HuA [Gallus gallus]
Length = 326
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++MTQ+++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRSMTQKDVVDMFSRFGRIINSRVLVDQTTG 144
>gi|351701320|gb|EHB04239.1| ELAV-like protein 1, partial [Heterocephalus glaber]
Length = 329
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 61
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 101 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 147
>gi|224087249|ref|XP_002190976.1| PREDICTED: ELAV-like protein 1-like [Taeniopygia guttata]
gi|449266784|gb|EMC77794.1| ELAV-like protein 1 [Columba livia]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++MTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|440910206|gb|ELR60031.1| ELAV-like protein 1, partial [Bos grunniens mutus]
Length = 330
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 3 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 43
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+ MTQ++++ +FS G + + +++ D+TTG
Sbjct: 83 PSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTG 129
>gi|417409800|gb|JAA51391.1| Putative rna-binding protein elav/hu rrm superfamily, partial
[Desmodus rotundus]
Length = 336
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 25 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 68
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+ MTQ++++ +FS G + + +++ D+TTG
Sbjct: 108 PSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTG 154
>gi|410950299|ref|XP_003981845.1| PREDICTED: ELAV-like protein 1 [Felis catus]
Length = 336
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 25 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 68
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 108 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 154
>gi|301773128|ref|XP_002921958.1| PREDICTED: ELAV-like protein 1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 325
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|148232140|ref|NP_001088628.1| ELAV-like protein 1-B [Xenopus laevis]
gi|82232943|sp|Q5U259.1|ELV1B_XENLA RecName: Full=ELAV-like protein 1-B; AltName: Full=Protein
ElrA-B; Short=ElrA
gi|55250533|gb|AAH86269.1| LOC495680 protein [Xenopus laevis]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +F G + + +++ D+ TG
Sbjct: 98 PSSETIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATG 144
>gi|1022961|gb|AAB41913.1| HuR RNA binding protein [Homo sapiens]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|38201714|ref|NP_001410.2| ELAV-like protein 1 [Homo sapiens]
gi|114675067|ref|XP_001156643.1| PREDICTED: ELAV-like protein 1 isoform 2 [Pan troglodytes]
gi|395750352|ref|XP_002828622.2| PREDICTED: ELAV-like protein 1 [Pongo abelii]
gi|395841768|ref|XP_003793705.1| PREDICTED: ELAV-like protein 1 [Otolemur garnettii]
gi|402914021|ref|XP_003919435.1| PREDICTED: ELAV-like protein 1 [Papio anubis]
gi|403296075|ref|XP_003938946.1| PREDICTED: ELAV-like protein 1 [Saimiri boliviensis boliviensis]
gi|426386981|ref|XP_004059957.1| PREDICTED: ELAV-like protein 1 isoform 1 [Gorilla gorilla
gorilla]
gi|20981691|sp|Q15717.2|ELAV1_HUMAN RecName: Full=ELAV-like protein 1; AltName: Full=Hu-antigen R;
Short=HuR
gi|13097228|gb|AAH03376.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|32879929|gb|AAP88795.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [Homo sapiens]
gi|60654991|gb|AAX32059.1| ELAV-like 1 [synthetic construct]
gi|60654993|gb|AAX32060.1| ELAV-like 1 [synthetic construct]
gi|60654995|gb|AAX32061.1| ELAV-like 1 [synthetic construct]
gi|60654997|gb|AAX32062.1| ELAV-like 1 [synthetic construct]
gi|119589355|gb|EAW68949.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_a [Homo sapiens]
gi|157928080|gb|ABW03336.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|157928791|gb|ABW03681.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R) [synthetic construct]
gi|208966198|dbj|BAG73113.1| ELAV-like 1protein [synthetic construct]
gi|355703066|gb|EHH29557.1| hypothetical protein EGK_10021 [Macaca mulatta]
gi|355755385|gb|EHH59132.1| hypothetical protein EGM_09177 [Macaca fascicularis]
gi|380784245|gb|AFE63998.1| ELAV-like protein 1 [Macaca mulatta]
gi|383416395|gb|AFH31411.1| ELAV-like protein 1 [Macaca mulatta]
gi|384945706|gb|AFI36458.1| ELAV-like protein 1 [Macaca mulatta]
gi|410212674|gb|JAA03556.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Pan troglodytes]
gi|410265350|gb|JAA20641.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Pan troglodytes]
gi|410305890|gb|JAA31545.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Pan troglodytes]
gi|410342973|gb|JAA40433.1| ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)
[Pan troglodytes]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|332264173|ref|XP_003281121.1| PREDICTED: ELAV-like protein 1 [Nomascus leucogenys]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|395513446|ref|XP_003760935.1| PREDICTED: ELAV-like protein 1 [Sarcophilus harrisii]
Length = 374
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 63 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 106
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 146 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 192
>gi|345327136|ref|XP_001505507.2| PREDICTED: ELAV-like protein 1-like [Ornithorhynchus anatinus]
Length = 229
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 38/44 (86%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TT
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTA 144
>gi|67968717|dbj|BAE00717.1| unnamed protein product [Macaca fascicularis]
Length = 326
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|297275993|ref|XP_001092907.2| PREDICTED: ELAV-like protein 1 isoform 4 [Macaca mulatta]
Length = 387
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|332852452|ref|XP_001156587.2| PREDICTED: ELAV-like protein 1 isoform 1 [Pan troglodytes]
gi|397477357|ref|XP_003810039.1| PREDICTED: ELAV-like protein 1 [Pan paniscus]
gi|426386983|ref|XP_004059958.1| PREDICTED: ELAV-like protein 1 isoform 2 [Gorilla gorilla
gorilla]
gi|194375035|dbj|BAG62630.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 45 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 85
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 125 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 171
>gi|343959022|dbj|BAK63366.1| ELAV-like protein 1 [Pan troglodytes]
Length = 305
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 18 GRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|221112748|ref|XP_002162771.1| PREDICTED: ELAV-like protein 3-like [Hydra magnipapillata]
Length = 376
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 48/68 (70%), Gaps = 8/68 (11%)
Query: 11 LHNSSVN--SHNSASQTPSN------EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
L N +N +H + S P N +E+ TNLI+NYLPQ MT+EE+++LFSSVG +ESC
Sbjct: 15 LMNGVINGLAHVNLSGYPLNLEQDPDDENPTNLIINYLPQEMTEEELRTLFSSVGPLESC 74
Query: 63 KLIRDKTT 70
KLIRDK T
Sbjct: 75 KLIRDKVT 82
>gi|449684824|ref|XP_002156791.2| PREDICTED: ELAV-like protein 2-like, partial [Hydra
magnipapillata]
Length = 354
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 39/43 (90%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+++ +TNLIVNYLPQ M++EE+K+LFSSVG +ESCKLIRDK T
Sbjct: 10 DDDKRTNLIVNYLPQEMSEEELKTLFSSVGALESCKLIRDKVT 52
>gi|390478481|ref|XP_003735519.1| PREDICTED: uncharacterized protein LOC100896727 [Callithrix
jacchus]
Length = 354
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 3 AMPQQNGSLHNSSVNSH-NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
A P + L N+ N + + ++ + +TNLIVNYLPQ MTQ+E++SLFSS+GEVES
Sbjct: 262 ASPPASRYLKNTMSNGYEDHMAEDCRGDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVES 321
Query: 62 CKLIRDKTTGE 72
KLIRDK G+
Sbjct: 322 AKLIRDKVAGK 332
>gi|26347149|dbj|BAC37223.1| unnamed protein product [Mus musculus]
Length = 326
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 37/44 (84%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ +TNLIVNYL Q MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIGRTNLIVNYLHQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|339246059|ref|XP_003374663.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972148|gb|EFV55839.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 427
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 9/78 (11%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE-LSVVANSIFAPE---- 84
+ KTNLIVNYLPQ+MT EE + LF S+GEVE+ KL+RDK TG+ L + PE
Sbjct: 16 DRKTNLIVNYLPQSMTTEEFRMLFDSIGEVETAKLVRDKVTGQSLGYGFINYVNPESAAK 75
Query: 85 ----LNGLHSQTERSRKS 98
LNGL Q+++ + S
Sbjct: 76 AIERLNGLGLQSKKMKVS 93
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP T +E++ LFS G + + +++ D TG
Sbjct: 97 PSSESIKGANLYISGLPDAYTVKELEELFSPFGRIITSRILVDNATG 143
>gi|407943922|pdb|4FXV|A Chain A, Crystal Structure Of An Elav-Like Protein 1 (Elavl1)
From Homo Sapiens At 1.90 A Resolution
gi|407943923|pdb|4FXV|B Chain B, Crystal Structure Of An Elav-Like Protein 1 (Elavl1)
From Homo Sapiens At 1.90 A Resolution
gi|407943924|pdb|4FXV|C Chain C, Crystal Structure Of An Elav-Like Protein 1 (Elavl1)
From Homo Sapiens At 1.90 A Resolution
gi|407943925|pdb|4FXV|D Chain D, Crystal Structure Of An Elav-Like Protein 1 (Elavl1)
From Homo Sapiens At 1.90 A Resolution
Length = 99
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/39 (76%), Positives = 34/39 (87%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNLIVNYLPQ TQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 20 TNLIVNYLPQNXTQDELRSLFSSIGEVESAKLIRDKVAG 58
>gi|410907065|ref|XP_003967012.1| PREDICTED: LOW QUALITY PROTEIN: ELAV-like protein 2-like, partial
[Takifugu rubripes]
Length = 321
Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NLIVNYLPQ M QEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 1 NLIVNYLPQNMXQEELKSLFGSIGEIESCKLVRDKITGQ 39
Score = 39.3 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 87 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 124
>gi|26354232|dbj|BAC40744.1| unnamed protein product [Mus musculus]
Length = 305
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/37 (81%), Positives = 33/37 (89%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
LIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 1 LIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 37
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 77 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 123
>gi|226480808|emb|CAX73501.1| ELAV-like protein 2 [Schistosoma japonicum]
Length = 161
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
LIVNYLPQTM+Q+EM+ LFS +G++ SCKLIRDK TG+
Sbjct: 87 LIVNYLPQTMSQDEMRGLFSKIGKLTSCKLIRDKLTGQ 124
>gi|226875175|gb|ACO88935.1| Elav [Octopus bimaculoides]
Length = 283
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 33/34 (97%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
VNY+PQTMTQEE++SLF+S+GEVESCKLIRDK T
Sbjct: 1 VNYVPQTMTQEEIRSLFASIGEVESCKLIRDKPT 34
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++ TQ +++ LFS G + + +++ D TG
Sbjct: 114 PSSESIKGANLYISGLPKSFTQLDLEKLFSQCGFIITSRILYDNNTG 160
>gi|399152197|emb|CCI89169.1| elav protein, partial [Sepia officinalis]
Length = 229
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 36/43 (83%)
Query: 38 NYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSI 80
NYLPQTMTQEE++SLF+S+GEVESCKLIRDK T ++ N I
Sbjct: 1 NYLPQTMTQEEIRSLFASIGEVESCKLIRDKPTAMNTLRQNDI 43
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 9/82 (10%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-- 84
SNEE +TNLI+NYLPQ+MT++++ SLF ++G VESC++++D TG +A
Sbjct: 107 SNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAED 166
Query: 85 -------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 167 AATAINTLNGLQVQNKRLKVSF 188
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG VA
Sbjct: 191 PSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVA 243
>gi|262272|gb|AAB24630.1| RNA recognition motif-type RNA-binding protein [Drosophila
melanogaster]
Length = 44
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 33/37 (89%)
Query: 36 IVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
VNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 1 FVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 37
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
T NEE +TNLI+NYLPQ+MT++++ SLF ++G VESC++++D TG +A
Sbjct: 77 TKGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 136
Query: 85 ---------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 137 EDAATAISTLNGLQVQNKRLKVSF 160
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG VA
Sbjct: 163 PSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVA 215
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
T NEE +TNLI+NYLPQ+MT++++ SLF ++G VESC++++D TG +A
Sbjct: 77 TKGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 136
Query: 85 ---------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 137 EDAATAISTLNGLQVQNKRLKVSF 160
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG VA
Sbjct: 163 PSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVA 215
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 9/84 (10%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
T NEE +TNLI+NYLPQ+MT++++ SLF ++G VESC++++D TG +A
Sbjct: 77 TKGNEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 136
Query: 85 ---------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 137 EDAATAISTLNGLQVQNKRLKVSF 160
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG
Sbjct: 163 PSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTG 209
>gi|340383337|ref|XP_003390174.1| PREDICTED: ELAV-like protein 3-like [Amphimedon queenslandica]
Length = 392
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 2/48 (4%)
Query: 26 PSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P N E +KTNLIVNYLPQT+T+E +K LFS G V SCKLI+DK++G
Sbjct: 15 PQNPETKAKTNLIVNYLPQTLTEEGLKQLFSQFGVVLSCKLIKDKSSG 62
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 9/84 (10%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
T SNEE +TNLI+NYLPQ M ++E+ SLF ++G VESC++++D TG +A
Sbjct: 21 TKSNEEPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKA 80
Query: 85 ---------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 81 EDAATAISTLNGLQVQNKRLKVSF 104
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG
Sbjct: 107 PSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTG 153
>gi|313230196|emb|CBY07900.1| unnamed protein product [Oikopleura dioica]
Length = 423
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
H+ S +ESKTNLIVNYLPQ TQ++++ LFSS+G++E+CKL R + T
Sbjct: 106 HSRMSPFTGGQESKTNLIVNYLPQNYTQDQLRELFSSIGDIETCKLCRHRET 157
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ SN TNL V +P+++T E+K+LF +G++ S +++ DK TG VA
Sbjct: 194 SYARPSSNIIKNTNLYVAGIPRSITLAEIKNLFGRLGKIISARILHDKDTGLSKGVA 250
>gi|351701133|gb|EHB04052.1| ELAV-like protein 1 [Heterocephalus glaber]
Length = 224
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ + NLIVN LPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 15 DDIRRMNLIVNCLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKNANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 36/39 (92%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
++NLIVNYLPQ+MTQ+E++SLFSS G+V SCKL+RDK +
Sbjct: 7 QSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNS 45
>gi|256075867|ref|XP_002574237.1| threonine dehydratase [Schistosoma mansoni]
Length = 956
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 13 NSSVNSHNSASQTPSNEE-SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N + N+ N S T NE+ S+TNLI+NYLPQ+ Q +++ LF VG + CKLIRDK TG
Sbjct: 55 NLTSNNQNGNSNTLCNEDRSRTNLIINYLPQSYDQNDLQRLFERVGPIRQCKLIRDKNTG 114
>gi|350646752|emb|CCD58473.1| Serine dehydratase, putative [Schistosoma mansoni]
Length = 953
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 13 NSSVNSHNSASQTPSNEE-SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N + N+ N S T NE+ S+TNLI+NYLPQ+ Q +++ LF VG + CKLIRDK TG
Sbjct: 55 NLTSNNQNGNSNTLCNEDRSRTNLIINYLPQSYDQNDLQRLFERVGPIRQCKLIRDKNTG 114
>gi|74179923|dbj|BAE36520.1| unnamed protein product [Mus musculus]
Length = 308
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLI NYLPQ MTQEE++ + SS+GEVES KLIRDK G
Sbjct: 1 RTNLIENYLPQNMTQEELQGVLSSIGEVESAKLIRDKVAG 40
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 80 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 126
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 36/43 (83%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ +TNLI+NY+P +M+QE++K +F +VG V SCKLIRD+ TG+
Sbjct: 7 DERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQ 49
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+ E K NL ++ LP+ M +EE+++LF G++ + K+++D +GE
Sbjct: 88 PSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGE 134
>gi|332029988|gb|EGI69813.1| Sex-lethal-like protein [Acromyrmex echinatior]
Length = 365
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-- 84
NEE +TNLI+NYLPQ M ++E+ SLF ++G VESC++++D TG +A
Sbjct: 89 GNEEPRTNLIINYLPQNMNEKELYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAED 148
Query: 85 -------LNGLHSQTERSRKSM 99
LNGL Q +R + S
Sbjct: 149 AATAISTLNGLQVQNKRLKVSF 170
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+ ++ LFS G + ++RDK TG
Sbjct: 173 PSGEEIKETNLYVTNLPRNITESQIDELFSKYGNIVQKNILRDKLTG 219
>gi|239938030|gb|ACS36114.1| RNA-binding protein Elav2 [Capitella teleta]
Length = 341
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 35/41 (85%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
SKTNLI+NYLPQT+T EE +S+F ++G V++ K++RDK TG
Sbjct: 17 SKTNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTG 57
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 27 SNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIF 81
S E+ K NL V +P+TMTQ E++ +FS GE+ +++ D +G+ V +F
Sbjct: 97 SGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTDVGSGQSKGVGFILF 152
>gi|443690134|gb|ELT92349.1| hypothetical protein CAPTEDRAFT_169706 [Capitella teleta]
Length = 383
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 35/41 (85%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
SKTNLI+NYLPQT+T EE +S+F ++G V++ K++RDK TG
Sbjct: 59 SKTNLIINYLPQTLTDEEFRSMFLAIGPVKASKIVRDKMTG 99
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 17 NSHNSASQTPSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSV 75
N + + S E+ K NL V +P+TMTQ E++ +FS GE+ +++ D +G+
Sbjct: 129 NKRIKVAYSRSGEQIKGANLYVRNIPRTMTQNELEEIFSPHGEIIQSRILTDVGSGQSKG 188
Query: 76 VANSIF 81
V +F
Sbjct: 189 VGFILF 194
>gi|241752336|ref|XP_002401050.1| RNA-binding protein precursor, putative [Ixodes scapularis]
gi|215508305|gb|EEC17759.1| RNA-binding protein precursor, putative [Ixodes scapularis]
Length = 195
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 35/41 (85%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+TNLI+NYLPQT+T EE +SLF+S+G ++S K++R K TG
Sbjct: 8 SQTNLIINYLPQTLTDEEFRSLFTSIGPIKSSKIVRHKATG 48
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD-KTTG 71
S+ + TNLIVNYLPQ MT+ EM S+FS++G +ESC+L+RD K TG
Sbjct: 98 SSGTAGTNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTG 143
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ S++ +TNL + LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 179 SYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVA 235
>gi|221121672|ref|XP_002156905.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ K NLIVNYLPQT TQ+E+ +F+ +G V +CKLIR+ TTG+
Sbjct: 11 DVKRNLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQ 53
>gi|221104585|ref|XP_002169901.1| PREDICTED: ELAV-like protein 2-like [Hydra magnipapillata]
Length = 339
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ K NLIVNYLPQT TQ+E+ +F+ +G V +CKLIR+ TTG+
Sbjct: 11 DVKRNLIVNYLPQTFTQDEVSQMFARIGPVSNCKLIRNYTTGQ 53
>gi|312375028|gb|EFR22477.1| hypothetical protein AND_15210 [Anopheles darlingi]
Length = 295
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD-KTTG 71
S + TNLIVNYLPQ MT++EM S+FS++G +ESC+L+RD K TG
Sbjct: 94 SPNHAGTNLIVNYLPQDMTEQEMYSIFSNMGPIESCRLMRDLKQTG 139
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ S++ +TNL + LP+T+ ++++ +F G + ++RDK TG+ VA
Sbjct: 175 SYARPQSDDIKETNLYITNLPRTINEDQLDIIFGKYGTIVQKNILRDKLTGQPRGVA 231
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%), Gaps = 1/46 (2%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD-KTTG 71
S+ + TNLIVNYLPQ MT+ EM S+FS++G +ESC+L+RD K TG
Sbjct: 76 SSGTAGTNLIVNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTG 121
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ S++ +TNL + LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 157 SYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVA 213
>gi|358334265|dbj|GAA52697.1| serine dehydratase-like, partial [Clonorchis sinensis]
Length = 1541
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 32/43 (74%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ S+TNLI+NYLPQ+ Q +++ LF VG + CKLIRDK TG
Sbjct: 650 DRSRTNLIINYLPQSYDQNDLQRLFERVGPIRQCKLIRDKNTG 692
>gi|325296731|ref|NP_001191601.1| ELAV 2-like protein [Aplysia californica]
gi|65307079|gb|AAY42042.1| ELAV 2-like protein [Aplysia californica]
Length = 325
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 37/44 (84%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ S TNLI+NYLPQT+T EE +S+F SVG V+S K++RDK+TG
Sbjct: 13 DDSSSTNLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTG 56
>gi|399152199|emb|CCI89170.1| elav protein, partial [Sepia officinalis]
Length = 171
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 33/39 (84%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNLI+NY+PQT+T EE +S+F S+G ++S K++RDK TG
Sbjct: 1 TNLIINYIPQTLTDEEFRSMFLSIGPIKSAKIVRDKATG 39
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 3 AMPQQNG-SLHNSSVNSHNSASQTPSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
AM NG + N ++ A P EE K NL V LP+ Q +++ LF G +
Sbjct: 58 AMQTLNGLQMQNKTIKV---ALARPGGEEIKGANLYVRNLPRHYQQMDLERLFQRFGTII 114
Query: 61 SCKLIRDKTTGELSVVANSIF 81
+++ D+TTG+ V +F
Sbjct: 115 QSRVLTDQTTGQSKGVGFVLF 135
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P + S TNLI+NYLPQ MT E+ +LFSS G + +CK++RD TG
Sbjct: 105 PEDRTSATNLIINYLPQDMTDRELYNLFSSCGSINTCKIMRDFKTG 150
>gi|345479144|ref|XP_003423885.1| PREDICTED: sex-lethal homolog isoform 1 [Nasonia vitripennis]
Length = 277
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S + +TNLI+NYLPQ+MT++E+ S+F ++G VESC++++D TG
Sbjct: 32 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTG 76
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+++++ +FS G++ +++DK TG
Sbjct: 116 PSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTG 162
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 36/46 (78%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P + + TNLIVNYLPQ +T+ E+ S+FS++G +E+C+++RD TG
Sbjct: 81 PGSNNAGTNLIVNYLPQDLTERELYSMFSTMGPIETCRIMRDVKTG 126
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ S++ +TNL + LP+T+T E++ +F G + ++RDK TG VA
Sbjct: 162 SYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGFPRGVA 218
>gi|345479148|ref|XP_003423887.1| PREDICTED: sex-lethal homolog isoform 3 [Nasonia vitripennis]
Length = 376
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S + +TNLI+NYLPQ+MT++E+ S+F ++G VESC++++D TG
Sbjct: 76 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTG 120
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+++++ +FS G++ +++DK TG
Sbjct: 160 PSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTG 206
>gi|345479146|ref|XP_003423886.1| PREDICTED: sex-lethal homolog isoform 2 [Nasonia vitripennis]
Length = 393
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S + +TNLI+NYLPQ+MT++E+ S+F ++G VESC++++D TG
Sbjct: 93 SRNDDRTNLIINYLPQSMTEKELYSMFVTIGPVESCRVMKDYKTG 137
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+++++ +FS G++ +++DK TG
Sbjct: 177 PSGEEIKETNLYVTNLPRNITEKQVEEIFSKFGQIVQKNILKDKLTG 223
>gi|242025166|ref|XP_002432997.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518506|gb|EEB20259.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 211
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 16 VNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSV 75
++ N ++ + KTNLI+NYLPQ MT +E+ S+F ++G V+SC++++D TG
Sbjct: 1 MDYQNQGQGVKNDCDDKTNLIINYLPQHMTDKELYSMFVTIGPVQSCRVMKDFKTGYSYG 60
Query: 76 VANSIFAPE---------LNGLHSQTERSRKS 98
+ E LNGL Q +R + S
Sbjct: 61 FGFVKYCKEEDASRAIGTLNGLQVQNKRLKVS 92
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P+ ++ K TNL V LP+ +T++E+ ++F G + +++DK TG
Sbjct: 96 PAGDDIKDTNLYVTNLPKNITEQELDNIFGPYGFIVQKNILKDKVTG 142
>gi|195546808|ref|NP_001091837.2| Elav protein [Bombyx mori]
gi|195542256|gb|ABM21482.2| ELAV [Bombyx mori]
Length = 301
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
EES T LIVNY+P+ MTQ+ M SLFS++G++ESCKLI ++ G
Sbjct: 19 EESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYG 61
>gi|195048229|ref|XP_001992493.1| GH24172 [Drosophila grimshawi]
gi|193893334|gb|EDV92200.1| GH24172 [Drosophila grimshawi]
Length = 365
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 4 MPQQ-NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
MP N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF S+G +
Sbjct: 84 MPMASNNSLNNLCGLSIGSGGSDDLMNDPRNSNTNLIVNYLPQDMTDRELYALFRSIGTI 143
Query: 60 ESCKLIRDKTTGELSVVANSIFAPELN 86
+C+++RD TG A F E++
Sbjct: 144 NTCRIMRDYKTGYSFGYAFVDFTSEMD 170
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|427782345|gb|JAA56624.1| Putative rna-binding protein elav/hu rrm superfamily
[Rhipicephalus pulchellus]
Length = 319
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 34/41 (82%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+TNLI+NYLPQ +T EE +SLF+S+G ++S K++R K TG
Sbjct: 8 SQTNLIINYLPQGLTDEEFRSLFTSIGPIKSSKIVRHKATG 48
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-------- 84
TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A FA E
Sbjct: 110 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 169
Query: 85 -LNGLHSQTER 94
LNG+ + +R
Sbjct: 170 SLNGITVRNKR 180
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG+ VA
Sbjct: 188 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVA 240
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-------- 84
TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A FA E
Sbjct: 102 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIK 161
Query: 85 -LNGLHSQTERSRKS 98
LNG+ + +R + S
Sbjct: 162 SLNGITVRNKRLKVS 176
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG+ VA
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVA 232
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 17 NSHNSASQTPSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++ SA T ++E+ S TNLI+NYLPQ MT E+ +LFSS G + +CK++RD TG
Sbjct: 165 DTQESACPTSNSEDRTSATNLIINYLPQNMTDRELFNLFSSCGSINTCKIMRDYKTG 221
>gi|242013287|ref|XP_002427343.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511696|gb|EEB14605.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NSA+ TP++ NLIVNYLP TMTQ +++ +F S GE+ESCKLI +K +G
Sbjct: 16 NSAN-TPTDHN---NLIVNYLPDTMTQTDLQKMFESFGEIESCKLIMNKVSG 63
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
S+ S S + S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG
Sbjct: 103 SLGSGGSDDLMNDHRPSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSF 162
Query: 75 VVANSIFAPELN 86
A F E++
Sbjct: 163 GYAFVDFTSEMD 174
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 199 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 251
>gi|167523433|ref|XP_001746053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775324|gb|EDQ88948.1| predicted protein [Monosiga brevicollis MX1]
Length = 635
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 14 SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
SS S+ S Q SKTNLI+NY+P + +Q+++++LF + G ++SCKL+ D+ TG+
Sbjct: 169 SSPTSNGSNGQFNQAPVSKTNLIINYIPNSFSQDDLRALFGAYGALKSCKLMYDRATGK 227
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE-------- 84
TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A FA E
Sbjct: 105 TNLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFASETDSQRAIK 164
Query: 85 -LNGLHSQTERSRKS 98
LNG+ + +R + S
Sbjct: 165 SLNGITVRNKRLKVS 179
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG+ VA
Sbjct: 183 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVA 235
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 121 RASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 203 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 255
>gi|6524499|gb|AAF15091.1| sex-lethal homolog [Megaselia scalaris]
Length = 147
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 9 GSLHN--SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
GS+ N +S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++R
Sbjct: 54 GSVGNMANSTNSLNSGT-----NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMR 108
Query: 67 DKTTGELSVVANSIFAPELNGLHS 90
D TG F E + L +
Sbjct: 109 DYKTGYSYGYGFVDFGSEADALRA 132
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 170
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|6524500|gb|AAF15092.1| sex-lethal homolog [Megaselia scalaris]
Length = 139
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 9 GSLHN--SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
GS+ N +S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++R
Sbjct: 46 GSVGNMANSTNSLNSGT-----NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMR 100
Query: 67 DKTTGELSVVANSIFAPELNGLHS 90
D TG F E + L +
Sbjct: 101 DYKTGYSYGYGFVDFGSEADALRA 124
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 125 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 205 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 257
>gi|195133248|ref|XP_002011051.1| GI16327 [Drosophila mojavensis]
gi|193907026|gb|EDW05893.1| GI16327 [Drosophila mojavensis]
Length = 716
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ LFSS G + +CK++RD TG
Sbjct: 248 SATNLIINYLPQDMTDRELYRLFSSCGSINTCKIMRDYKTG 288
>gi|357626334|gb|EHJ76460.1| hypothetical protein KGM_20562 [Danaus plexippus]
Length = 966
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N H + P +ES T LIVNY+P+ MTQ+ M SLFS++G++ESCKLI ++ G
Sbjct: 9 NCHGNNEFGP--DESPTKLIVNYIPEVMTQDMMFSLFSTMGKLESCKLIANRGYG 61
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 123 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 203 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 255
>gi|6469493|emb|CAB61832.1| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 167
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 9 GSLHN--SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
GS+ N +S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++R
Sbjct: 43 GSVGNMANSTNSLNSGT-----NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMR 97
Query: 67 DKTTGELSVVANSIFAPELNGLHS 90
D TG F E + L +
Sbjct: 98 DYKTGYSYGYGFVDFGSEADALRA 121
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 125 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 205 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 257
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 117 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 172
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 197 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 249
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 129 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 184
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 209 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 261
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 123 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 203 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 255
>gi|357631741|gb|EHJ79210.1| sex-lethal [Danaus plexippus]
Length = 333
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 38/47 (80%)
Query: 25 TPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ + + KTNLIVNYLPQTMT++++ ++F S+G +ESC++++D TG
Sbjct: 53 SSAGDAGKTNLIVNYLPQTMTEKDLYAMFMSIGPIESCRVMKDFKTG 99
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS E+ K TNL V LP+ +T+++++++F G + ++RDK+ G VA
Sbjct: 139 PSGEDIKETNLYVTNLPRAITEDQLETIFGKYGRIVQKHILRDKSNGTPRGVA 191
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 170
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 113 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 168
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 193 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 245
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 108 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 163
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 188 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 240
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 91 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 146
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 171 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 223
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 113 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 168
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 193 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 245
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 91 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 146
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 171 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGPIVQKNILRDKLTGRPRGVA 223
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 91 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 146
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 171 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 223
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 83 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 138
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 163 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 215
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 9 GSLHN--SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
GS+ N +S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++R
Sbjct: 57 GSVGNMANSTNSLNSGT-----NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMR 111
Query: 67 DKTTGELSVVANSIFAPELNGLHS 90
D TG F E + L +
Sbjct: 112 DYKTGYSYGYGFVDFGSEADALRA 135
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E+ + TNL V L +++T E+++++F G++ ++RDK TG VA
Sbjct: 156 PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVA 208
>gi|157836373|pdb|2SXL|A Chain A, Sex-Lethal Rbd1, Nmr, Minimized Average Structure
Length = 88
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG A F E++
Sbjct: 2 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMD 57
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG
Sbjct: 115 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTG 155
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 9 GSLHN--SSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
GS+ N +S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++R
Sbjct: 43 GSVGNMANSTNSLNSGT-----NNSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMR 97
Query: 67 DKTTGELSVVANSIFAPELNGLHS 90
D TG F E + L +
Sbjct: 98 DYKTGYSYGYGFVDFGSEADALRA 121
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E+ + TNL V L +++T E+++++F G++ ++RDK TG VA
Sbjct: 142 PGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVA 194
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG
Sbjct: 2 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTG 42
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 82 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 134
>gi|6469495|emb|CAB61831.1| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 121
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
S NS NS + S TNLIVNYLPQ M E+ SLF ++G + +C+++RD TG
Sbjct: 4 STNSLNSGTN-----NSGTNLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSY 58
Query: 75 VVANSIFAPELNGLHS 90
F E + L +
Sbjct: 59 GYGFVDFGSEADALRA 74
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 111 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 151
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 131
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 131
>gi|194763555|ref|XP_001963898.1| GF21012 [Drosophila ananassae]
gi|190618823|gb|EDV34347.1| GF21012 [Drosophila ananassae]
Length = 757
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 103 DRASATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 146
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 15 SVNSHNSASQTPSNEES--KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S NS NS + + TNLIVNYLPQ MT E+ +LF + G + +C++++D TG
Sbjct: 65 STNSVNSGGGDCGDNQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGY 124
Query: 73 LSVVANSIFAPELN 86
A FA E++
Sbjct: 125 SFGYAFVDFASEID 138
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +E++ +F G + ++RDK TG+ VA
Sbjct: 163 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVA 215
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 15 SVNSHNSASQTPSNEES--KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S NS NS + + TNLIVNYLPQ MT E+ +LF + G + +C++++D TG
Sbjct: 82 STNSVNSGGGDCGDTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGY 141
Query: 73 LSVVANSIFAPELN 86
A FA E++
Sbjct: 142 SFGYAFVDFASEID 155
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +E++ +F G + ++RDK TG+ VA
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVA 232
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
S+NS + + TNLIVNYLPQ MT E+ +LF + G + +C++++D TG
Sbjct: 77 SLNSGGDGGGGDTQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSF 136
Query: 75 VVANSIFAPELN 86
A FA E++
Sbjct: 137 GYAFVDFASEID 148
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +E++ +F G + ++RDK TG VA
Sbjct: 173 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVA 225
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
SL + + H Q PSN TNLIVNYLPQ MT E+ +LF ++G + +C+++RD
Sbjct: 109 SLGSGGSDDHMLNDQRPSN----TNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYK 164
Query: 70 TG 71
TG
Sbjct: 165 TG 166
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 206 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 258
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 99 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 139
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 131
>gi|195564591|ref|XP_002105898.1| GD16553 [Drosophila simulans]
gi|194203263|gb|EDX16839.1| GD16553 [Drosophila simulans]
Length = 226
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 131
>gi|444729824|gb|ELW70227.1| ELAV-like protein 2 [Tupaia chinensis]
Length = 353
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELNGL 88
E+SKTNLIVNYLPQ MTQEE+KSLF S+G+ + + N+ LNGL
Sbjct: 42 EDSKTNLIVNYLPQNMTQEELKSLFGSIGQSLGYGFVNYIDPKDAEKAINT-----LNGL 96
Query: 89 HSQTE 93
QT+
Sbjct: 97 RLQTK 101
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 119 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 156
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
S+NS + + TNLIVNYLPQ MT E+ +LF + G + +C++++D TG
Sbjct: 84 SLNSGGDGGGGDTQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSF 143
Query: 75 VVANSIFAPELN 86
A FA E++
Sbjct: 144 GYAFVDFASEID 155
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +E++ +F G + ++RDK TG VA
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVA 232
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 90 NNSLNNLCGLSIGSGGSDDHMNDQRNSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 149
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 150 MRDYKTG 156
Score = 36.6 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 196 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 248
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG--------ELSVVANS 79
++ S+TNLI+NYLPQ +T+ E+ +F ++G V +CK++RD TG ++
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 80 IFAPE-LNGLHSQTERSRKS 98
I A + LNGL Q +R + S
Sbjct: 82 IRAIQTLNGLQIQNKRIKVS 101
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ P + +TNL V LP+ +T++E+ ++FS+ G + L++DK TG VA
Sbjct: 101 SYARPPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVA 157
>gi|195565544|ref|XP_002106359.1| Sex lethal [Drosophila simulans]
gi|194203735|gb|EDX17311.1| Sex lethal [Drosophila simulans]
Length = 301
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 89 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 148
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 149 MRDYKTG 155
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 36/45 (80%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++TNLIVNYLPQ +T++++ ++F ++G +ESC++++D TG
Sbjct: 11 GGDTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTG 55
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS ++ K TNL V LP+ +T ++++++F G + ++RDK +G VA
Sbjct: 95 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVA 147
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG--------ELSVVANS 79
++ S+TNLI+NYLPQ +T+ E+ +F ++G V +CK++RD TG ++
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 80 IFAPE-LNGLHSQTERSRKS 98
I A + LNGL Q +R + S
Sbjct: 82 IRAIQTLNGLQIQNKRIKVS 101
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 21 SASQTPSNEESKTNLIVNYLP-QTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S ++ P + +TNL V LP + +T++E+ ++FS+ G + L++DK TG
Sbjct: 101 SYARPPGEDRKETNLYVTNLPSRDVTEDELTNIFSAHGNIVQMNLLKDKITG 152
>gi|21355069|ref|NP_650473.1| CG5213 [Drosophila melanogaster]
gi|7300034|gb|AAF55205.1| CG5213 [Drosophila melanogaster]
gi|19528057|gb|AAL90143.1| AT22957p [Drosophila melanogaster]
gi|220949694|gb|ACL87390.1| CG5213-PA [synthetic construct]
gi|220958914|gb|ACL92000.1| CG5213-PA [synthetic construct]
Length = 251
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT------GELSVVANSIF 81
N KTNLI+NYLPQ MT+ E+ LFS GE+ K+IR + T G + V+
Sbjct: 36 NLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTGISCCYGFVDYVSERQA 95
Query: 82 APELNGLHSQTERSRK 97
A +NG+ R ++
Sbjct: 96 AAAVNGMDGYETRGKR 111
>gi|195132500|ref|XP_002010681.1| GI21573 [Drosophila mojavensis]
gi|193907469|gb|EDW06336.1| GI21573 [Drosophila mojavensis]
Length = 367
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 4 MPQ-QNGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
MP N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G +
Sbjct: 84 MPMASNNSLNNLCGLSIGSGGSDDLMNDQRTSNTNLIVNYLPQDMTDRELYALFRAIGPI 143
Query: 60 ESCKLIRDKTTG 71
+C+++RD TG
Sbjct: 144 NTCRIMRDYKTG 155
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ MT E+ LF++ G + +CK++RD TG
Sbjct: 118 SSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTG 158
>gi|195162221|ref|XP_002021954.1| GL14245 [Drosophila persimilis]
gi|194103852|gb|EDW25895.1| GL14245 [Drosophila persimilis]
Length = 618
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ MT E+ LF++ G + +CK++RD TG
Sbjct: 118 SSTNLIVNYLPQDMTDRELYELFANFGGINTCKIMRDFKTG 158
>gi|195570612|ref|XP_002103301.1| GD19030 [Drosophila simulans]
gi|194199228|gb|EDX12804.1| GD19030 [Drosophila simulans]
Length = 244
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 26 PSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS E +KTNLI+NYLPQ MT+ E+ LFS GE+ K+IR + TG
Sbjct: 32 PSRPEVRNKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTG 79
>gi|195328687|ref|XP_002031046.1| GM24242 [Drosophila sechellia]
gi|194119989|gb|EDW42032.1| GM24242 [Drosophila sechellia]
Length = 244
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 26 PSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS E KTNLI+NYLPQ MT+ E+ LFS GE+ K+IR + TG
Sbjct: 32 PSRTEVRDKTNLILNYLPQDMTESELHRLFSKYGEIRKAKVIRHRDTG 79
>gi|194901064|ref|XP_001980072.1| GG16933 [Drosophila erecta]
gi|190651775|gb|EDV49030.1| GG16933 [Drosophila erecta]
Length = 255
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ +TNLI+NYLPQ MT+ E++ LFS GE+ K+IR + TG
Sbjct: 37 QDQTNLILNYLPQDMTESEVRRLFSKFGEIRKAKIIRHRLTG 78
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 35/43 (81%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ S TNLI+NYLPQ+MT +++ +F+ +G++E+C++++D TG
Sbjct: 5 DTSMTNLIINYLPQSMTDKKLHQMFTQIGQIEACRVMKDVKTG 47
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P+ E+ K TNL V LP+++T+ E++ LF+ G++ +++DK +G
Sbjct: 87 PAGEDIKDTNLYVQNLPRSITERELEDLFAPYGQIVQKNILKDKYSG 133
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 89 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 148
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 149 MRDYKTG 155
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 89 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 148
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 149 MRDYKTG 155
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 57 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 116
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 117 MRDYKTG 123
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 163 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 215
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 87 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 146
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 147 MRDYKTG 153
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 193 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 245
>gi|313230477|emb|CBY18692.1| unnamed protein product [Oikopleura dioica]
Length = 227
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ KTNLIVNYLPQ+ T +E +LFS+VG V ++IR + TG
Sbjct: 68 KEKTNLIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTG 109
>gi|313246014|emb|CBY34981.1| unnamed protein product [Oikopleura dioica]
Length = 225
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ KTNLIVNYLPQ+ T +E +LFS+VG V ++IR + TG
Sbjct: 68 KEKTNLIVNYLPQSFTDQEFFNLFSTVGRVNKARIIRHRQTG 109
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 8 NGSLHNS---SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
N SL+N S+ S S S TNLIVNYLPQ MT E+ +LF ++G + +C++
Sbjct: 89 NNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRI 148
Query: 65 IRDKTTG 71
+RD TG
Sbjct: 149 MRDYKTG 155
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 195 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 247
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From
Drosophila Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From
Drosophila Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From
Drosophila Melanogaster
Length = 184
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ T E+ +LF ++G + +C++ RD TG
Sbjct: 13 SNTNLIVNYLPQDXTDRELYALFRAIGPINTCRIXRDYKTG 53
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 93 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 145
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S TNLIVNYLPQ MT E SLFS++G +ES +++RD T
Sbjct: 77 SGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKT 116
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P+ EE K TNL V LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 157 PAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVA 209
>gi|302757135|ref|XP_002961991.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
gi|302775356|ref|XP_002971095.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300161077|gb|EFJ27693.1| hypothetical protein SELMODRAFT_9010 [Selaginella moellendorffii]
gi|300170650|gb|EFJ37251.1| hypothetical protein SELMODRAFT_9008 [Selaginella moellendorffii]
Length = 80
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ TNL V YLP T E +K LFSS G++E K+I+D+TTG
Sbjct: 1 DDDTNLYVGYLPATYDDESLKRLFSSFGQIEEVKVIKDRTTG 42
>gi|357626291|gb|EHJ76427.1| putative ELAV-like protein 1 [Danaus plexippus]
Length = 370
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 33/41 (80%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S T L+VNY+P+ MT++ M +LFS++G++ESCKLI ++ G
Sbjct: 13 SPTKLMVNYIPELMTRDMMYALFSAMGKIESCKLIANRGYG 53
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S TNLIVNYLPQ MT E SLFS++G +ES +++RD T
Sbjct: 76 SGTNLIVNYLPQDMTDREFYSLFSTMGPIESSRIMRDFKT 115
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P+ EE K TNL V LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 156 PAGEEIKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVA 208
>gi|256089346|ref|XP_002580772.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
gi|353230889|emb|CCD77306.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 414
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 32/38 (84%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLI+NY+P ++T ++ +LFSSVG +++C++IRD+ +G
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGAIKTCRIIRDRNSG 45
>gi|76154205|gb|AAX25698.2| SJCHGC08696 protein [Schistosoma japonicum]
Length = 242
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 32/38 (84%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLI+NY+P ++T ++ +LFSSVG +++C++IRD+ +G
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSG 45
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++E +TNLI+NYLPQ+MT E+ S+F + G + ++IRD+ +G
Sbjct: 24 GDDEDRTNLIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSG 68
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 36/43 (83%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++TNLIVNYLPQ +T++++ ++F ++G +ESC++++D TG
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTG 101
Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS ++ K TNL V LP+ +T ++++++F G + ++RDK +G VA
Sbjct: 141 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVA 193
>gi|257215878|emb|CAX83091.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 32/38 (84%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLI+NY+P ++T ++ +LFSSVG +++C++IRD+ +G
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSG 45
>gi|321475411|gb|EFX86374.1| hypothetical protein DAPPUDRAFT_98025 [Daphnia pulex]
Length = 335
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/29 (79%), Positives = 28/29 (96%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
MTQEE++SLF+S+GEVESCKLIRDK TG+
Sbjct: 1 MTQEEIRSLFASIGEVESCKLIRDKITGQ 29
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
PS+E K NL V+ +P+TM Q E+++LF+ G + + +++ D T LS
Sbjct: 68 PSSENIKGANLYVSGIPKTMCQSELETLFAPFGRIITSRILCDSITAGLS 117
>gi|154338660|ref|XP_001565552.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062604|emb|CAM39046.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 239
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
S+ + +H++ + ++ NLIVNYLP M +E++ LF G +ES K+I DK
Sbjct: 21 SVVAAVAGAHSTFGGCAFDPDALRNLIVNYLPPLMNEEQVCELFGQFGRIESVKIIYDKI 80
Query: 70 TGE 72
TGE
Sbjct: 81 TGE 83
>gi|257215880|emb|CAX83092.1| ELAV-like protein 1 (Hu-antigen R) [Schistosoma japonicum]
Length = 301
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 32/38 (84%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLI+NY+P ++T ++ +LFSSVG +++C++IRD+ +G
Sbjct: 8 NLIINYIPTSITDADLTNLFSSVGTIKTCRIIRDRNSG 45
>gi|357619997|gb|EHJ72347.1| hypothetical protein KGM_14614 [Danaus plexippus]
Length = 320
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/27 (85%), Positives = 26/27 (96%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTT 70
M+QEE++SLFSSVGEVESCKLIRDK T
Sbjct: 1 MSQEEIRSLFSSVGEVESCKLIRDKVT 27
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 36/43 (83%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++TNLIVNYLPQ +T++++ ++F ++G +ESC++++D TG
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTG 101
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS ++ K TNL V LP+ +T ++++++F G + ++RDK +G VA
Sbjct: 141 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVA 193
>gi|426229025|ref|XP_004008594.1| PREDICTED: ELAV-like protein 3 isoform 2 [Ovis aries]
Length = 318
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQ 29
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 77 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 114
>gi|395850847|ref|XP_003797985.1| PREDICTED: ELAV-like protein 3 isoform 1 [Otolemur garnettii]
gi|397520901|ref|XP_003830546.1| PREDICTED: ELAV-like protein 3 isoform 1 [Pan paniscus]
gi|402904297|ref|XP_003914983.1| PREDICTED: ELAV-like protein 3 isoform 1 [Papio anubis]
gi|403302356|ref|XP_003941826.1| PREDICTED: ELAV-like protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|410950488|ref|XP_003981937.1| PREDICTED: ELAV-like protein 3 isoform 2 [Felis catus]
gi|14280337|gb|AAK57545.1| Hu antigen C long [Homo sapiens]
Length = 318
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQ 29
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 77 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 114
>gi|397520903|ref|XP_003830547.1| PREDICTED: ELAV-like protein 3 isoform 2 [Pan paniscus]
Length = 311
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 1 MTQDEFKSLFGSIGDIESCKLVRDKITGQ 29
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 77 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 114
>gi|391333252|ref|XP_003741033.1| PREDICTED: ELAV-like protein 2-like [Metaseiulus occidentalis]
Length = 409
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N P S +NLIVNYLPQ ++ +E LF +G +++CK++R+K TG
Sbjct: 3 NCYGTHPGEVPSSSNLIVNYLPQKLSDQEFYDLFGQIGRIKTCKIVRNKLTG 54
>gi|349963011|dbj|GAA41029.1| ELAV-like protein 2 [Clonorchis sinensis]
Length = 518
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLI+NY+P+ +T ++ +LF SVG V++C++IRD++ G
Sbjct: 8 NLIINYIPRHLTDSDLANLFGSVGAVKTCRIIRDRSNG 45
>gi|195501252|ref|XP_002097723.1| GE24318 [Drosophila yakuba]
gi|194183824|gb|EDW97435.1| GE24318 [Drosophila yakuba]
Length = 256
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLI+NYLPQ MT+ E+ LFS GE+ K+IR + TG
Sbjct: 37 RGQTNLILNYLPQDMTELEVHRLFSKFGEIRKAKIIRHRRTG 78
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S TNLIVNYLPQ MT E +LFS+ G +ES +++RD T
Sbjct: 73 SGTNLIVNYLPQDMTDREFYALFSTTGPIESSRIMRDFKT 112
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P+ EE K TNL V LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 153 PAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVA 205
>gi|194744937|ref|XP_001954949.1| GF18529 [Drosophila ananassae]
gi|190627986|gb|EDV43510.1| GF18529 [Drosophila ananassae]
Length = 417
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P ++TNLI+NYLPQ MT+ E+ +FS G + K+IRD +TG
Sbjct: 135 PVQPSNRTNLIINYLPQDMTEMELADIFSKFGHLRRHKIIRDLSTG 180
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 36/43 (83%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ ++TNLIVNYLPQ +T++++ ++F ++G +ESC++++D TG
Sbjct: 59 DTARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTG 101
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
PS ++ K TNL V LP+ +T ++++++F G + ++RDK +G VA
Sbjct: 141 PSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVA 193
>gi|221121216|ref|XP_002166224.1| PREDICTED: ELAV-like protein 4-like [Hydra magnipapillata]
Length = 346
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
KT +IVNY+PQ+M+ +E + LFS G ++ CK+IRDK T
Sbjct: 13 KTKIIVNYIPQSMSDDEFRQLFSQCGALQECKIIRDKQT 51
>gi|405963075|gb|EKC28679.1| ELAV-like protein 2 [Crassostrea gigas]
Length = 502
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ TNLIVNYLPQT++ E+ K LF +G ++S K++RDK T
Sbjct: 188 DPNTNLIVNYLPQTLSDEDFKELFEKIGPLKSYKIVRDKAT 228
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S ++ +E N+ + +P++ +EE+ + F GE+ +L+RDK+T E
Sbjct: 265 SYARKNDSESKGANIYIANIPRSFGEEELGAHFRQFGEIIQVRLLRDKSTNE 316
>gi|157870510|ref|XP_001683805.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68126872|emb|CAJ04773.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 240
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+ NLIVNYLP M + ++ LF G +ES K+I DK TGE
Sbjct: 39 DPEALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGE 83
>gi|198425734|ref|XP_002119812.1| PREDICTED: similar to HUC, partial [Ciona intestinalis]
Length = 408
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 34/42 (80%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+++TNLIVNYLPQT++ +E LF++VG V S ++IRDK +G
Sbjct: 80 QAQTNLIVNYLPQTLSDQEFYQLFNNVGAVTSARIIRDKQSG 121
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S TNLIVNYLPQ MT E +LFS+ G +ES +++RD T
Sbjct: 71 SGTNLIVNYLPQDMTDREFYALFSTSGPIESSRIMRDFKT 110
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P+ EE K TNL V LP+T+T+E++ +F G + ++RDK TG+ VA
Sbjct: 151 PAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVA 203
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E K+ LIVNY+PQ T+E++ +F+ +G VES K++RD TG
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTG 65
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S S+ P + +NL + LP+ +T++++ LFS+ GE+ +++DK TG
Sbjct: 101 SYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITG 151
>gi|281203789|gb|EFA77985.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 447
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 31/39 (79%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NL VN+LP T+T E+++S+FS+ G +ESC+++ D TG+
Sbjct: 139 NLFVNFLPSTVTTEDLRSMFSAFGAIESCRVMIDLVTGQ 177
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 12 HNSSVNSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
H + NS + P +++K NL + LP + TQE++ FS+ G + KL+ D T
Sbjct: 213 HANVENSVTTGGVAPHVDDAKATNNLYIKGLPLSFTQEQLNEFFSAYGTILESKLLLDIT 272
Query: 70 T 70
T
Sbjct: 273 T 273
>gi|401423237|ref|XP_003876105.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492346|emb|CBZ27620.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 240
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++ NLIVNYLP M + ++ LF G +ES K+I DK TGE
Sbjct: 39 DPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGE 83
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E K+ LIVNY+PQ T+E++ +F+ +G VES K++RD TG
Sbjct: 23 ECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTG 65
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S S+ P + +NL + LP+ +T++++ LFS+ GE+ +++DK TG
Sbjct: 101 SYSRPPGADMKASNLYITNLPKDVTEDDVHRLFSNYGEIIQKSVLKDKITG 151
>gi|398016390|ref|XP_003861383.1| RNA-binding protein, putative [Leishmania donovani]
gi|322499609|emb|CBZ34683.1| RNA-binding protein, putative [Leishmania donovani]
Length = 240
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++ NLIVNYLP M + ++ LF G +ES K+I DK TGE
Sbjct: 39 DPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGE 83
>gi|146088561|ref|XP_001466084.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134070186|emb|CAM68521.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 240
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++ NLIVNYLP M + ++ LF G +ES K+I DK TGE
Sbjct: 39 DPDALRNLIVNYLPPLMNEAQVYELFGQFGRIESVKIIYDKITGE 83
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 15 SVNSHNSASQTPSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S NS NS + + + TNLIVNYLPQ MT E+ +LF + G + +C++++D TG
Sbjct: 82 STNSVNSGGGDCGDTQGCNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGY 141
Query: 73 LSVVANSIFAPELNG 87
A FA E++
Sbjct: 142 SFGYAFVDFASEIDA 156
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +E++ +F G + ++RDK TG+ VA
Sbjct: 180 PGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVA 232
>gi|353232427|emb|CCD79782.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 535
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
M+QEE++ LFS+ G++ESCKLIRDK TGE
Sbjct: 1 MSQEEVRVLFSTCGQIESCKLIRDKLTGE 29
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL ++ LP+TM Q E++ LFS G + + +++ D TG
Sbjct: 77 NLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTG 114
>gi|256075727|ref|XP_002574168.1| elav (embryonic lethal abnormal vision drosophila)-like protein
[Schistosoma mansoni]
Length = 517
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
M+QEE++ LFS+ G++ESCKLIRDK TGE
Sbjct: 1 MSQEEVRVLFSTCGQIESCKLIRDKLTGE 29
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL ++ LP+TM Q E++ LFS G + + +++ D TG
Sbjct: 77 NLYISGLPKTMKQNELEQLFSQYGRIITARILYDNKTG 114
>gi|156388911|ref|XP_001634736.1| predicted protein [Nematostella vectensis]
gi|156221822|gb|EDO42673.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ESKT LIVNY+PQ MT + + +F +V + +CK++R K +G
Sbjct: 1 QESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSG 43
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 22 ASQTPSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
A P + +K NL V +P+ + + E + F + G + +C+L+RDK+TG
Sbjct: 79 AFSRPGGDNTKGANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTG 129
>gi|195395310|ref|XP_002056279.1| GJ10859 [Drosophila virilis]
gi|194142988|gb|EDW59391.1| GJ10859 [Drosophila virilis]
Length = 388
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 21 SASQTPSNEESK--TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+AS +P+ +++ TNL+VNYLP M + E+ +LF S G ++ K+IRD TG
Sbjct: 15 TASSSPAEDQTGETTNLLVNYLPFDMLEGELYALFVSFGHIKHVKIIRDAETG 67
>gi|432119731|gb|ELK38615.1| ELAV-like protein 1 [Myotis davidii]
Length = 296
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 25/28 (89%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTG 71
MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 1 MTQDELRSLFSSIGEVESAKLIRDKVAG 28
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 68 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 114
>gi|294949580|ref|XP_002786268.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900425|gb|EER18064.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 100
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++NLIVNYLP M +E + S+F + G ++S K++RD+ TG
Sbjct: 2 DRSNLIVNYLPTRMDEEALFSMFEAFGPIQSVKIVRDRHTG 42
>gi|340054733|emb|CCC49035.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 322
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E NLI+NY+P +T+ E+++LF GEVES ++I D+ T
Sbjct: 6 EPDPRNLIINYIPTPVTENELRALFEPFGEVESLRIICDRET 47
>gi|340058196|emb|CCC52550.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 172
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
G +H S + ++ E NLIVNYLP M + ++ LF+ G +ES K+I DK
Sbjct: 26 GDVHTSGAPLIAPRNNCATDPEPLRNLIVNYLPPMMDESQLYQLFAQFGPIESVKIIYDK 85
Query: 69 TTGE 72
T E
Sbjct: 86 ETKE 89
>gi|253771010|gb|ACT35655.1| elav-like protein 2 [Macrostomum lignano]
Length = 422
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+TNLI+NYLPQ + +E ++LF SV V+ K+ RDK +G
Sbjct: 5 SRTNLIINYLPQAFSDDEFRALFGSVAPVKRAKVCRDKRSG 45
>gi|261333941|emb|CBH16935.1| RBP3 [Trypanosoma brucei gambiense DAL972]
Length = 200
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E NLIVNYLP M ++ + LF+ G +ES K+I DK T E
Sbjct: 75 EPLRNLIVNYLPPMMDEDRLFQLFAQFGPIESVKIIYDKVTRE 117
>gi|71754461|ref|XP_828145.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833531|gb|EAN79033.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 200
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E NLIVNYLP M ++ + LF+ G +ES K+I DK T E
Sbjct: 75 EPLRNLIVNYLPPMMDEDRLFQLFAQFGPIESVKIIYDKVTRE 117
>gi|360043584|emb|CCD81130.1| elav (embryonic lethal, abnormal vision,drosophila)-like protein
[Schistosoma mansoni]
Length = 682
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 44 MTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
M+QEEM+ LFS +G++ SCKLIRDK TG+
Sbjct: 1 MSQEEMRILFSKIGKLASCKLIRDKLTGQ 29
>gi|342185186|emb|CCC94669.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 175
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE---LSVVANSIF-- 81
++ E NLIVNYLP M + ++ LF+ G +ES K+I DK T E V + F
Sbjct: 59 TDAEPLRNLIVNYLPPMMDETQLFQLFAQFGPIESVKIIYDKVTRESRGYGFVKYTFFFS 118
Query: 82 ----APELNGLHSQTERSRKSM 99
LNG H +R + +
Sbjct: 119 ATYAVHWLNGYHIAGKRLKVAF 140
>gi|66801427|ref|XP_629639.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
gi|60463019|gb|EAL61215.1| hypothetical protein DDB_G0292472 [Dictyostelium discoideum AX4]
Length = 550
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
++ TNLIVN +P++M E+KSLF GE+ESCK++ ++
Sbjct: 79 DALTNLIVNNIPKSMDSNELKSLFDKFGEIESCKIVFNR 117
>gi|387169546|gb|AFJ66205.1| hypothetical protein 34G24.3 [Capsella rubella]
Length = 806
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ S+ PS E +TNL + +LP + + + +LFSS GE+ K+I+D+ TG
Sbjct: 467 TPSKPPSKEYDETNLYIGFLPPMLDDDGLINLFSSFGEIVMAKVIKDRVTG 517
>gi|59713039|ref|YP_205815.1| RNA-binding protein [Vibrio fischeri ES114]
gi|59481140|gb|AAW86927.1| RNA-binding protein [Vibrio fischeri ES114]
Length = 116
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NS++SA P+++++ T L V LP + ++K LF+ G+V + +L++DK TG+
Sbjct: 55 NSNDSADTAPNSDQASTTLYVGNLPYRANESDVKELFAEFGDVFAVRLMKDKRTGK 110
>gi|225470686|ref|XP_002263312.1| PREDICTED: uncharacterized protein LOC100261746 [Vitis vinifera]
Length = 751
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 6 QQNGSLHNSS---VNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
Q + SL SS + S P+ E S +L V YLPQTM + + LF+ G++
Sbjct: 483 QGSNSLWGSSGLEIGSTPDTQSKPNKETSDADLYVGYLPQTMDENCLAELFAPFGKIAKT 542
Query: 63 KLIRDKTTG 71
K+I+D+ TG
Sbjct: 543 KVIKDRATG 551
>gi|71667203|ref|XP_820553.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885902|gb|EAN98702.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++ E+ NLIVNYLP M + ++ LF G +ES K+I DK T E
Sbjct: 70 TDPEALRNLIVNYLPPMMDETQLYGLFGQFGPIESVKIIYDKETRE 115
>gi|31074186|gb|AAO73304.1| RNA-binding protein RBP-3 [Trypanosoma cruzi]
gi|31074959|gb|AAP42137.1| RNA-binding protein RBP-3 [Trypanosoma cruzi]
Length = 198
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++ E+ NLIVNYLP M + ++ LF G +ES K+I DK T E
Sbjct: 70 TDPEALRNLIVNYLPPMMDETQLYGLFGQFGPIESVKIIYDKETRE 115
>gi|197336379|ref|YP_002157218.1| RNA-binding protein [Vibrio fischeri MJ11]
gi|423687167|ref|ZP_17661975.1| RNA-binding protein [Vibrio fischeri SR5]
gi|197317869|gb|ACH67316.1| RNA-binding protein [Vibrio fischeri MJ11]
gi|371493566|gb|EHN69167.1| RNA-binding protein [Vibrio fischeri SR5]
Length = 160
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NS++SA P+++++ T L V LP + ++K LF+ G+V + +L++DK TG+
Sbjct: 55 NSNDSADTAPNSDQASTTLYVGNLPYRANESDVKELFAEFGDVFAVRLMKDKRTGK 110
>gi|297838115|ref|XP_002886939.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
lyrata]
gi|297332780|gb|EFH63198.1| hypothetical protein ARALYDRAFT_475645 [Arabidopsis lyrata subsp.
lyrata]
Length = 782
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG+ + + S + ++ PS E +TNL + +LP + + + +LFSS GE+ K+I+D
Sbjct: 439 NGASAHPGLGS--TPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKD 496
Query: 68 KTTG 71
+ TG
Sbjct: 497 RVTG 500
>gi|297795935|ref|XP_002865852.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
lyrata]
gi|297311687|gb|EFH42111.1| hypothetical protein ARALYDRAFT_495202 [Arabidopsis lyrata subsp.
lyrata]
Length = 798
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG+ + + S + ++ PS E +TNL + +LP + + + +LFSS GE+ K+I+D
Sbjct: 452 NGASAHPGLGS--TPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKD 509
Query: 68 KTTG 71
+ TG
Sbjct: 510 RVTG 513
>gi|15241418|ref|NP_199943.1| splicing factor 1 [Arabidopsis thaliana]
gi|30696034|ref|NP_851169.1| splicing factor 1 [Arabidopsis thaliana]
gi|79330558|ref|NP_001032055.1| splicing factor 1 [Arabidopsis thaliana]
gi|8843867|dbj|BAA97393.1| unnamed protein product [Arabidopsis thaliana]
gi|23297082|gb|AAN13087.1| unknown protein [Arabidopsis thaliana]
gi|222423074|dbj|BAH19518.1| AT5G51300 [Arabidopsis thaliana]
gi|222423561|dbj|BAH19750.1| AT5G51300 [Arabidopsis thaliana]
gi|332008680|gb|AED96063.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008681|gb|AED96064.1| splicing factor 1 [Arabidopsis thaliana]
gi|332008682|gb|AED96065.1| splicing factor 1 [Arabidopsis thaliana]
Length = 804
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG+ + + S + ++ PS E +TNL + +LP + + + +LFSS GE+ K+I+D
Sbjct: 457 NGASAHPGLGS--TPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKD 514
Query: 68 KTTG 71
+ TG
Sbjct: 515 RVTG 518
>gi|302755434|ref|XP_002961141.1| hypothetical protein SELMODRAFT_9015 [Selaginella moellendorffii]
gi|302766900|ref|XP_002966870.1| hypothetical protein SELMODRAFT_9013 [Selaginella moellendorffii]
gi|300164861|gb|EFJ31469.1| hypothetical protein SELMODRAFT_9013 [Selaginella moellendorffii]
gi|300172080|gb|EFJ38680.1| hypothetical protein SELMODRAFT_9015 [Selaginella moellendorffii]
Length = 77
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNL V YLP E ++SLF G++E K+IRD+ TG
Sbjct: 1 TNLYVGYLPPNYDDESLRSLFCPFGQIEEVKVIRDRNTG 39
>gi|13877739|gb|AAK43947.1|AF370132_1 unknown protein [Arabidopsis thaliana]
Length = 804
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NG+ + + S + ++ PS E +TNL + +LP + + + +LFSS GE+ K+I+D
Sbjct: 457 NGASAHPGLGS--TPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKD 514
Query: 68 KTTG 71
+ TG
Sbjct: 515 RVTG 518
>gi|66803959|ref|XP_635793.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60464119|gb|EAL62280.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL +++LP T T + ++S+FS+ GE++SC+++ D TG
Sbjct: 100 NLFISFLPATYTSDTLRSIFSAFGEIDSCRVMVDLNTG 137
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 4 MPQQNGSLHNSSVNSHNSASQTPSNEE----SKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
MP N SL NS + S +SQ P + TNL V LP + LFS G +
Sbjct: 353 MPTMN-SLPNSMIGS---SSQPPPGGKNPGTDPTNLYVYNLPSDADDSLLYRLFSPCGAI 408
Query: 60 ESCKLIRDKTT 70
S K++RD+TT
Sbjct: 409 ASVKIVRDQTT 419
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+S++ TP E + NLI+NYLP ++T+ +++ LF G +++ K++ D+ T
Sbjct: 74 DSSADTP---EPRNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYT 121
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
NL + LP+T+T+++++++F+ GE+ S +L+ D
Sbjct: 170 ANLYIKNLPRTITEDQLRAIFNPFGEIISARLLYD 204
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 5 PQQNGSLHNSSVNSHN-------SASQTPSNE---ESKTNLIVNYLPQTMTQEEMKSLFS 54
P + GS+ + V H+ A+ PS + K L V L T ++E ++ F+
Sbjct: 16 PLKAGSIDGTDVKPHDHGVVRALEATYKPSKYIKTDPKLTLFVGRLNPTTSEERLREFFA 75
Query: 55 SVGEVESCKLIRDKTTG 71
GEV SC+L+RD TG
Sbjct: 76 HYGEVRSCRLVRDIITG 92
>gi|330794853|ref|XP_003285491.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
gi|325084582|gb|EGC38007.1| hypothetical protein DICPUDRAFT_149370 [Dictyostelium purpureum]
Length = 352
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V++LP T T E +K LFS GE++SCK++ D TG
Sbjct: 19 LFVSFLPSTYTNESLKVLFSPFGEIDSCKVMVDLNTG 55
>gi|414587608|tpg|DAA38179.1| TPA: hypothetical protein ZEAMMB73_126317 [Zea mays]
Length = 750
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+TNL + YLP TM + SLFS GE+ K+I+D+ TG+
Sbjct: 426 ETNLYIGYLPPTMDDAGLVSLFSQFGEIVMAKVIKDRNTGQ 466
>gi|195111486|ref|XP_002000309.1| GI10157 [Drosophila mojavensis]
gi|193916903|gb|EDW15770.1| GI10157 [Drosophila mojavensis]
Length = 356
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNL++NYLP M + E+ LF+S G + K+IRD TG
Sbjct: 31 TNLLINYLPSDMQENELHQLFNSFGLLRQVKIIRDPETG 69
>gi|328866616|gb|EGG14999.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 505
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L VN+LP T+T E + ++FS GE+ESC+++ D +G
Sbjct: 126 LFVNFLPNTITTETLHAMFSVFGEIESCRVMVDLVSG 162
>gi|269468289|gb|EEZ79971.1| RNA-binding protein [uncultured SUP05 cluster bacterium]
Length = 83
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+++ LP+T+++ E++ LF GEV+SC LI DK TGE
Sbjct: 3 ILIRNLPRTLSENELEELFKVYGEVQSCTLILDKATGE 40
>gi|294464552|gb|ADE77786.1| unknown [Picea sitchensis]
Length = 101
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 3 AMPQQNGSLHNSSVNSHNSASQTPSNEESKT------NLIVNYLPQTMTQEEMKSLFSSV 56
A+P +GS+ + VN++++A ++ ++ NL + ++PQ +E+ + FSS
Sbjct: 12 ALPVGHGSVGPAMVNANSAAGNVKTSSGAQVEGPPGANLFIYHIPQEFGDQELSNAFSSF 71
Query: 57 GEVESCKLIRDKTTG 71
G+V S K+ DK TG
Sbjct: 72 GKVISAKVFVDKATG 86
>gi|261330728|emb|CBH13713.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 179
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 9 GSLHNSSVNSHNSASQTP---SNEESKTNLIVNYLPQ------TMTQEEMKSLFSSVGEV 59
G LH S + A P S + ++ V LP+ T T EE+ LF+ G +
Sbjct: 72 GVLHGQVSGSTSHAPGQPHHFSKDSDGRSIFVGNLPKGDNGGPTTTPEELAHLFADCGPI 131
Query: 60 ESCKLIRDKTTGELSVVANSIFAPELNGLHSQTERSRKSMF 100
+C L+RD+TTGEL A F+ G+ + +MF
Sbjct: 132 LNCTLLRDRTTGELKGTAYVEFS-TYTGMGKAIDTKNNTMF 171
>gi|72393347|ref|XP_847474.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175134|gb|AAX69282.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70803504|gb|AAZ13408.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 184
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 9 GSLHNSSVNSHNSASQTP---SNEESKTNLIVNYLPQ------TMTQEEMKSLFSSVGEV 59
G LH S + A P S + ++ V LP+ T T EE+ LF+ G +
Sbjct: 77 GVLHGQVSGSTSHAPGQPHHFSKDSDGRSIFVGNLPKGDNGGPTTTPEELAHLFADCGPI 136
Query: 60 ESCKLIRDKTTGELSVVANSIFAPELNGLHSQTERSRKSMF 100
+C L+RD+TTGEL A F+ G+ + +MF
Sbjct: 137 LNCTLLRDRTTGELKGTAYVEFS-TYTGMGKAIDTKNNTMF 176
>gi|225461650|ref|XP_002283115.1| PREDICTED: uncharacterized protein LOC100267539 [Vitis vinifera]
Length = 794
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P E TNL + YLP T+ + + LFS G++ K+I+D+ TG
Sbjct: 488 PIKEYDDTNLYIGYLPPTLEDDALIRLFSPFGDIVMAKVIKDRVTG 533
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 14 SSVNSHNSASQTPSNEESK---TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S V + QTP NE + TNL V YLP +T +++ LF G++ K++ DK T
Sbjct: 792 SDVATFARTPQTPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAKVVVDKFT 851
Query: 71 G 71
G
Sbjct: 852 G 852
>gi|410949991|ref|XP_003981699.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Felis
catus]
Length = 472
Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS +E + L V L + TQE ++S FS GEV C +++DKTT +
Sbjct: 69 PSEQEERKKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQ 115
>gi|76152800|gb|AAX24478.2| SJCHGC08603 protein [Schistosoma japonicum]
Length = 110
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 22/24 (91%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGE 58
LIVNYLPQTM+Q+EM+ LFS +G+
Sbjct: 87 LIVNYLPQTMSQDEMRGLFSKIGK 110
>gi|449458337|ref|XP_004146904.1| PREDICTED: uncharacterized protein LOC101205455 [Cucumis sativus]
Length = 777
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P+ E TNL + YLP T + + LFS+ G++ K+I+D+ +G
Sbjct: 474 PAKEYDDTNLYIGYLPPTFDDDGLIRLFSTFGDIVMAKVIKDRVSG 519
>gi|449525351|ref|XP_004169681.1| PREDICTED: uncharacterized LOC101205455 [Cucumis sativus]
Length = 778
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P+ E TNL + YLP T + + LFS+ G++ K+I+D+ +G
Sbjct: 474 PAKEYDDTNLYIGYLPPTFDDDGLIRLFSTFGDIVMAKVIKDRVSG 519
>gi|387196968|gb|AFJ68786.1| elav-like protein 2, partial [Nannochloropsis gaditana CCMP526]
Length = 358
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
PQQ + ++ + +TNLIVNYLP + ++ LF G+VES ++
Sbjct: 88 PQQATVSAAGAGGKARGSTYSGEGATDRTNLIVNYLPNEIDDMGLRELFQDFGQVESARV 147
Query: 65 IRDKTTG 71
IR+K +G
Sbjct: 148 IREKGSG 154
>gi|154341356|ref|XP_001566631.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063954|emb|CAM40145.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 210
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 12 HNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
HN++ ++ PSN+E + LIVNYL Q +T ++ +LF+ G ++ ++I D+ T
Sbjct: 91 HNAARHNRTQMIPVPSNDERYRKQLIVNYLAQDVTSADLHTLFARFGPLDGARIIFDRQT 150
>gi|169596084|ref|XP_001791466.1| hypothetical protein SNOG_00791 [Phaeosphaeria nodorum SN15]
gi|160701225|gb|EAT92286.2| hypothetical protein SNOG_00791 [Phaeosphaeria nodorum SN15]
Length = 302
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
G + V S N P + S +NL V + ++T+EE+ LF GEVE C ++RD
Sbjct: 43 GGRDDRYVFSRNEEDDDPGSRNSGSNLFVTGIHPSLTEEEVTRLFEKYGEVEQCNIMRDP 102
Query: 69 TT 70
T
Sbjct: 103 HT 104
>gi|298710320|emb|CBJ31940.1| Xel-1 protein [Ectocarpus siliculosus]
Length = 573
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 32/42 (76%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ NLI+NYLP +T+ E++++F+ G++ K++ D++TG+
Sbjct: 106 SENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGK 147
>gi|255539831|ref|XP_002510980.1| zinc finger protein, putative [Ricinus communis]
gi|223550095|gb|EEF51582.1| zinc finger protein, putative [Ricinus communis]
Length = 798
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P E TNL + YLP + + + LFS+ G++ K+I+D+ TG
Sbjct: 490 PIKEYDDTNLYIGYLPPNLDDDGLIGLFSAFGDIVMAKVIKDRVTG 535
>gi|391341498|ref|XP_003745067.1| PREDICTED: uncharacterized protein LOC100900989 [Metaseiulus
occidentalis]
Length = 462
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVAN 78
HN A + E +NL + +LPQ +T ++ SLF+ GEV S K+ D+ T +LS
Sbjct: 345 HNPAGKQQEGPEG-SNLFIYHLPQDLTDMDLVSLFAPFGEVISAKVFVDRHT-QLSKCFG 402
Query: 79 SIFAPELNGLHSQ 91
F NGLH+Q
Sbjct: 403 --FVSYSNGLHAQ 413
>gi|123468140|ref|XP_001317333.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121900064|gb|EAY05110.1| hypothetical protein TVAG_108440 [Trichomonas vaginalis G3]
Length = 332
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSI 80
+ S+ SNEES + + L T+T++ ++ LFS+ GE++ K+ RD+ TG+ VA
Sbjct: 159 NVSEKISNEESNRTVFIGQLKPTVTEDMLRKLFSNAGEIDHVKIPRDRETGKSRYVAYVT 218
Query: 81 FAPE 84
F E
Sbjct: 219 FVDE 222
>gi|154341070|ref|XP_001566488.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063811|emb|CAM40000.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 619
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 13 NSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++S S+ + + P S+TNL V L +T+++M+ LF G + S L+RD TGE
Sbjct: 47 SASPPSYEAVALDPKGPRSQTNLFVRKLASAVTEDDMRRLFGQYGTIISFALMRDIYTGE 106
>gi|330798463|ref|XP_003287272.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
gi|325082732|gb|EGC36205.1| hypothetical protein DICPUDRAFT_151346 [Dictyostelium purpureum]
Length = 518
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 31/42 (73%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
+++++ TNLIVN +P++M E+K+ F G +E+CK++ ++
Sbjct: 110 ADQDALTNLIVNNIPRSMDSSELKNYFEKFGAIETCKVVYNR 151
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S +Q S + + NL VN L +T +K +FS+ GEV K++ D TG
Sbjct: 209 SYAQASSLQSNHANLYVNRLEPHVTNANLKEIFSNFGEVIDTKILIDPDTG 259
>gi|298528161|ref|ZP_07015565.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511813|gb|EFI35715.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNL V LP + T+ +++ LF+ GEV S K+I D+ TG
Sbjct: 2 TNLYVGNLPWSTTEAQLRDLFAEYGEVSSAKIIEDRETG 40
>gi|168028585|ref|XP_001766808.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682017|gb|EDQ68439.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 677
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N++ NL V YLP T+ E + LF+ G VE K+IRD+ TG
Sbjct: 445 NKDDDANLYVGYLPSTVDDEGLARLFAPFGAVEHAKVIRDRLTG 488
>gi|328876996|gb|EGG25359.1| hypothetical protein DFA_03608 [Dictyostelium fasciculatum]
Length = 1145
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 31/43 (72%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
P++ ++ TNLIV+ +P+ T E++K LF GE+ES K++ ++
Sbjct: 697 PADLDALTNLIVHNIPKHFTNEDLKDLFEEFGEIESYKVVANR 739
>gi|403376282|gb|EJY88118.1| RNA recognition motif (RRM)-containing protein [Oxytricha
trifallax]
Length = 1352
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ V LP ++ EE ++ F+ G++E C +++DK TG+
Sbjct: 465 IFVGGLPHNLSDEEFRAFFAKFGDIEDCAILKDKRTGK 502
>gi|389594239|ref|XP_003722366.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438864|emb|CBZ12624.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 210
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P QN HN + PSN+E + LIVNYL Q +T ++ +LF+ G ++ +
Sbjct: 89 PDQNALRHNRT-----QMVPVPSNDERYRKQLIVNYLAQDVTSADLHTLFARFGPLDGAR 143
Query: 64 LIRDKTT 70
+I D+ T
Sbjct: 144 IIFDRQT 150
>gi|436841131|ref|YP_007325509.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170037|emb|CCO23408.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 87
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V LP + T+E++++ F + GEV S KLI D+ TG
Sbjct: 4 NLYVGNLPWSATEEDVRAAFEAFGEVTSVKLIEDRETG 41
>gi|146093385|ref|XP_001466804.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398019095|ref|XP_003862712.1| hypothetical protein, conserved [Leishmania donovani]
gi|134071167|emb|CAM69853.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500942|emb|CBZ36019.1| hypothetical protein, conserved [Leishmania donovani]
Length = 210
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P QN HN + PSN+E + LIVNYL Q +T ++ +LF+ G ++ +
Sbjct: 89 PDQNALRHNRT-----QMVPVPSNDERYRKQLIVNYLAQDVTSADLHTLFARFGPLDGAR 143
Query: 64 LIRDKTT 70
+I D+ T
Sbjct: 144 IIFDRQT 150
>gi|326922683|ref|XP_003207576.1| PREDICTED: RNA-binding protein 45-like [Meleagris gallopavo]
Length = 381
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S S +E T + V +P+T T+E+++ F G++E C +I++KTTGE
Sbjct: 12 SRASGSHRDVEDEELTRIFV-MIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGE 65
>gi|410624690|ref|ZP_11335485.1| RNP-1 like RNA-binding protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410155771|dbj|GAC30859.1| RNP-1 like RNA-binding protein [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 93
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
LI+ L +T TQE + +LF+ +G V+SC L+ DK TG
Sbjct: 3 LIIRNLARTTTQESLSALFTEIGLVQSCTLVIDKVTG 39
>gi|406929348|gb|EKD64949.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 106
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V LP T+ E ++ LF SVG+V+S +I+D+ TG
Sbjct: 4 NLFVGGLPFTIAGEALEQLFGSVGQVQSVNIIKDRYTG 41
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 11 LHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+HN+S +Q NEE+K L V LP +E++K+LFS G V+S KL+ D TT
Sbjct: 591 IHNAS---GGDTAQEDVNEEAK--LYVANLPSHYEEEDLKTLFSPYGLVQSVKLVLDHTT 645
Query: 71 G 71
G
Sbjct: 646 G 646
>gi|71895175|ref|NP_001026423.1| RNA-binding protein 45 [Gallus gallus]
gi|53132019|emb|CAG31865.1| hypothetical protein RCJMB04_12j16 [Gallus gallus]
Length = 502
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S S +E T + V +P+T T+E+++ F G++E C +I++KTTGE
Sbjct: 133 SRASGSHRDVEDEELTRIFV-MIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGE 186
>gi|401415854|ref|XP_003872422.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488646|emb|CBZ23893.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 638
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ + + P S+TNL V L +T+++M+ LF G + S L+RD TGE
Sbjct: 50 SYEAVALDPKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGE 104
>gi|386816934|ref|ZP_10104152.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
gi|386421510|gb|EIJ35345.1| RNP-1 like RNA-binding protein [Thiothrix nivea DSM 5205]
Length = 127
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V LP +T+ E++ LF + GEV S +I+DK TG+
Sbjct: 2 NIYVGNLPYKITENELRDLFGAYGEVSSVSMIKDKMTGQ 40
>gi|198431449|ref|XP_002130974.1| PREDICTED: similar to HrETR-1 [Ciona intestinalis]
Length = 538
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
+ +PQ GS+ S+ +SH +TP ++ L + +P+ ++E++ +F+ GE+
Sbjct: 45 VPVLPQHCGSIM-SNTHSH-PLKETPEKDDDAVKLFIGQVPKNWEEKELRQVFAPFGEIF 102
Query: 61 SCKLIRDKTTG 71
++RDK TG
Sbjct: 103 ELSVLRDKYTG 113
>gi|389593931|ref|XP_003722214.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|321438712|emb|CBZ12472.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 639
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ + + P S+TNL V L +T+++M+ LF G + S L+RD TGE
Sbjct: 51 SYEAVALDPKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGE 105
>gi|398018793|ref|XP_003862561.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500791|emb|CBZ35868.1| RNA-binding protein, putative [Leishmania donovani]
Length = 639
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ + + P S+TNL V L +T+++M+ LF G + S L+RD TGE
Sbjct: 51 SYEAVALDPKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGE 105
>gi|146093095|ref|XP_001466659.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134071022|emb|CAM69702.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 639
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ + + P S+TNL V L +T+++M+ LF G + S L+RD TGE
Sbjct: 51 SYEAVALDPKGPRSQTNLFVRKLASAVTEDDMRKLFEQYGTIMSFALMRDIHTGE 105
>gi|224055170|ref|XP_002197058.1| PREDICTED: RNA-binding protein 45, partial [Taeniopygia guttata]
Length = 463
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S S +E T + V +P+T T+E+++ F G++E C +I++KTTGE
Sbjct: 94 SRASGSHRDLEDEELTRIFV-MIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGE 147
>gi|258405873|ref|YP_003198615.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
gi|257798100|gb|ACV69037.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
Length = 87
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E++ LF+ GEV+S KLI D+ TG
Sbjct: 3 NIYVGNLPFSSTEDEVRDLFAQYGEVQSVKLISDRDTG 40
>gi|317154439|ref|YP_004122487.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944690|gb|ADU63741.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E+++ F + GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEDEIRAAFGAYGEVTSVKLIEDRETG 41
>gi|71664678|ref|XP_819317.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884613|gb|EAN97466.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 140
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 11/88 (12%)
Query: 1 MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQ------TMTQEEMKSLFS 54
M A QQ G + +S H S + ++ V LP+ T T EE+ F+
Sbjct: 33 MAAQQQQPGVMAPTSGQPHQF-----SKDSDGRSIFVGNLPRGENGGPTTTPEELAQFFA 87
Query: 55 SVGEVESCKLIRDKTTGELSVVANSIFA 82
G++ +C ++RD+ TGEL A FA
Sbjct: 88 DCGQILNCTVLRDRGTGELKGTAYVEFA 115
>gi|452851689|ref|YP_007493373.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
gi|451895343|emb|CCH48222.1| putative RNA-binding protein rbpA [Desulfovibrio piezophilus]
Length = 87
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E+++ F++ GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEDEVRAAFAAYGEVTSVKLIEDRETG 41
>gi|358056795|dbj|GAA97145.1| hypothetical protein E5Q_03820 [Mixia osmundae IAM 14324]
Length = 2950
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 3 AMPQQNGSLHNSSVNSHNSASQTP---SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
A+P+ ++ V + P SNEE+K L V +PQ TQ+ F+ G +
Sbjct: 1879 AIPRPGAPRSSAGVRPPETRPNNPVPNSNEETK--LFVRGVPQGATQQHFYDHFAKFGPM 1936
Query: 60 ESCKLIRDKTTG 71
ESC L+ D+TTG
Sbjct: 1937 ESCVLMFDRTTG 1948
>gi|342182005|emb|CCC91484.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 324
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
E NLIVNY+P +T+ ++ +LF G ++S ++I D++
Sbjct: 2 EPDPCNLIVNYIPTPVTEADLHALFKPFGALQSVRIIFDRS 42
>gi|24215251|ref|NP_712732.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
56601]
gi|45657299|ref|YP_001385.1| glycine rich RNA-binding protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|386074547|ref|YP_005988864.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|417762541|ref|ZP_12410530.1| hypothetical protein LEP1GSC027_1944 [Leptospira interrogans str.
2002000624]
gi|417766762|ref|ZP_12414712.1| hypothetical protein LEP1GSC007_2329 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|417770705|ref|ZP_12418610.1| hypothetical protein LEP1GSC014_2469 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|417775026|ref|ZP_12422886.1| hypothetical protein LEP1GSC025_2580 [Leptospira interrogans str.
2002000621]
gi|417783557|ref|ZP_12431275.1| hypothetical protein LEP1GSC077_1172 [Leptospira interrogans str.
C10069]
gi|418670230|ref|ZP_13231602.1| hypothetical protein LEP1GSC019_2498 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|418671529|ref|ZP_13232880.1| hypothetical protein LEP1GSC026_3426 [Leptospira interrogans str.
2002000623]
gi|418682158|ref|ZP_13243378.1| hypothetical protein LEP1GSC045_3909 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|418692189|ref|ZP_13253268.1| hypothetical protein LEP1GSC080_0694 [Leptospira interrogans str.
FPW2026]
gi|418700016|ref|ZP_13260961.1| hypothetical protein LEP1GSC087_3292 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|418704417|ref|ZP_13265290.1| hypothetical protein LEP1GSC096_0473 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|418708764|ref|ZP_13269564.1| hypothetical protein LEP1GSC097_1001 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|418712011|ref|ZP_13272758.1| hypothetical protein LEP1GSC099_1828 [Leptospira interrogans str.
UI 08452]
gi|418724848|ref|ZP_13283632.1| hypothetical protein LEP1GSC104_2843 [Leptospira interrogans str.
UI 12621]
gi|418728349|ref|ZP_13286922.1| hypothetical protein LEP1GSC105_1281 [Leptospira interrogans str.
UI 12758]
gi|421083926|ref|ZP_15544795.1| hypothetical protein LEP1GSC173_2424 [Leptospira santarosai str.
HAI1594]
gi|421102189|ref|ZP_15562797.1| hypothetical protein LEP1GSC117_2761 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|421116664|ref|ZP_15577044.1| hypothetical protein LEP1GSC069_2131 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|421119300|ref|ZP_15579624.1| hypothetical protein LEP1GSC057_3236 [Leptospira interrogans str.
Brem 329]
gi|421125488|ref|ZP_15585740.1| hypothetical protein LEP1GSC020_1582 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|421133201|ref|ZP_15593351.1| hypothetical protein LEP1GSC009_2366 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|24196341|gb|AAN49750.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
56601]
gi|45600537|gb|AAS70022.1| glycine rich RNA-binding protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353458336|gb|AER02881.1| RNA-binding protein [Leptospira interrogans serovar Lai str.
IPAV]
gi|400326168|gb|EJO78437.1| hypothetical protein LEP1GSC045_3909 [Leptospira interrogans
serovar Pomona str. Kennewicki LC82-25]
gi|400350900|gb|EJP03152.1| hypothetical protein LEP1GSC007_2329 [Leptospira interrogans
serovar Bulgarica str. Mallika]
gi|400357979|gb|EJP14098.1| hypothetical protein LEP1GSC080_0694 [Leptospira interrogans str.
FPW2026]
gi|409941534|gb|EKN87162.1| hypothetical protein LEP1GSC027_1944 [Leptospira interrogans str.
2002000624]
gi|409947361|gb|EKN97360.1| hypothetical protein LEP1GSC014_2469 [Leptospira interrogans
serovar Pomona str. Pomona]
gi|409953181|gb|EKO07682.1| hypothetical protein LEP1GSC077_1172 [Leptospira interrogans str.
C10069]
gi|409961745|gb|EKO25488.1| hypothetical protein LEP1GSC104_2843 [Leptospira interrogans str.
UI 12621]
gi|410011831|gb|EKO69942.1| hypothetical protein LEP1GSC069_2131 [Leptospira interrogans
serovar Canicola str. Fiocruz LV133]
gi|410022627|gb|EKO89402.1| hypothetical protein LEP1GSC009_2366 [Leptospira interrogans
serovar Grippotyphosa str. Andaman]
gi|410347930|gb|EKO98781.1| hypothetical protein LEP1GSC057_3236 [Leptospira interrogans str.
Brem 329]
gi|410368017|gb|EKP23397.1| hypothetical protein LEP1GSC117_2761 [Leptospira interrogans
serovar Icterohaemorrhagiae str. Verdun LP]
gi|410433582|gb|EKP77924.1| hypothetical protein LEP1GSC173_2424 [Leptospira santarosai str.
HAI1594]
gi|410437066|gb|EKP86170.1| hypothetical protein LEP1GSC020_1582 [Leptospira interrogans
serovar Grippotyphosa str. 2006006986]
gi|410575123|gb|EKQ38145.1| hypothetical protein LEP1GSC025_2580 [Leptospira interrogans str.
2002000621]
gi|410581488|gb|EKQ49298.1| hypothetical protein LEP1GSC026_3426 [Leptospira interrogans str.
2002000623]
gi|410754001|gb|EKR15658.1| hypothetical protein LEP1GSC019_2498 [Leptospira interrogans
serovar Pyrogenes str. 2006006960]
gi|410760888|gb|EKR27081.1| hypothetical protein LEP1GSC087_3292 [Leptospira interrogans
serovar Bataviae str. L1111]
gi|410765813|gb|EKR36507.1| hypothetical protein LEP1GSC096_0473 [Leptospira interrogans
serovar Hebdomadis str. R499]
gi|410770694|gb|EKR45907.1| hypothetical protein LEP1GSC097_1001 [Leptospira interrogans
serovar Grippotyphosa str. UI 08368]
gi|410776866|gb|EKR56841.1| hypothetical protein LEP1GSC105_1281 [Leptospira interrogans str.
UI 12758]
gi|410791518|gb|EKR85192.1| hypothetical protein LEP1GSC099_1828 [Leptospira interrogans str.
UI 08452]
gi|455668729|gb|EMF33919.1| hypothetical protein LEP1GSC201_2116 [Leptospira interrogans
serovar Pomona str. Fox 32256]
gi|455789292|gb|EMF41221.1| hypothetical protein LEP1GSC067_0923 [Leptospira interrogans
serovar Lora str. TE 1992]
gi|456969053|gb|EMG10140.1| hypothetical protein LEP1GSC151_2726 [Leptospira interrogans
serovar Grippotyphosa str. LT2186]
gi|456986982|gb|EMG22419.1| hypothetical protein LEP1GSC150_3504 [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 131
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q S E + V LPQ +T++E+K +FS G VE + +DKTTG
Sbjct: 2 QIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTG 49
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
T L V +P++ +EE+K+LF+++ +ES LI++KTT E
Sbjct: 3 TKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNE 42
>gi|294874430|ref|XP_002766952.1| U2 snRNP component IST3, putative [Perkinsus marinus ATCC 50983]
gi|239868327|gb|EEQ99669.1| U2 snRNP component IST3, putative [Perkinsus marinus ATCC 50983]
Length = 81
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
K+NLI+NYLP + + ++ + G +S K++RDK TG
Sbjct: 3 KSNLIINYLPAHIQENDLAEMCEPFGPYQSVKIVRDKNTG 42
>gi|31074960|gb|AAP42138.1| RNA-binding protein UBP-2 [Trypanosoma cruzi]
Length = 166
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 30 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVADRET 66
>gi|71660764|ref|XP_822097.1| RNA-binding protein 6 [Trypanosoma cruzi strain CL Brener]
gi|70887490|gb|EAO00246.1| RNA-binding protein 6, putative [Trypanosoma cruzi]
Length = 250
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 2 DAMPQQNGSLHNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
+A P + +SS H + + PSN+E + LIVNYL + E+ LFS G ++
Sbjct: 123 NAAPGGYHQMGHSSTQRHQT-TPVPSNDERYRKQLIVNYLAPDVVSAELHGLFSRFGPLD 181
Query: 61 SCKLIRDKTT 70
++I D+ T
Sbjct: 182 GARIIHDRQT 191
>gi|407849925|gb|EKG04496.1| RNA-binding protein 6, putative [Trypanosoma cruzi]
Length = 246
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 2 DAMPQQNGSLHNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
+A P + +SS H + + PSN+E + LIVNYL + E+ LFS G ++
Sbjct: 119 NAAPGGYHQMGHSSTQRHQT-TPVPSNDERYRKQLIVNYLAPDVVSAELHGLFSRFGPLD 177
Query: 61 SCKLIRDKTT 70
++I D+ T
Sbjct: 178 GARIIHDRQT 187
>gi|401409201|ref|XP_003884049.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
gi|325118466|emb|CBZ54017.1| CUG-BP-and ETR-3-like factor 3, related [Neospora caninum
Liverpool]
Length = 678
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELNGLHSQ 91
+ L V +P+TM+++E++ F + G VE +++D TG A F + GLH+
Sbjct: 232 QAKLFVGSIPRTMSEDELRVFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAM 291
Query: 92 TERSRKSMF 100
+ K +F
Sbjct: 292 RNLNGKHIF 300
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
LH+ SVNS S+T N+ V ++P T+ ++ FS G + SC + DK
Sbjct: 419 GLHHGSVNSGIGGSETAG--PPGANVFVFHIPNEWTKADLIQTFSGFGNIVSCHIAVDKV 476
Query: 70 T 70
+
Sbjct: 477 S 477
>gi|395519869|ref|XP_003764064.1| PREDICTED: RNA-binding protein 45 [Sarcophilus harrisii]
Length = 380
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ +S S +E T + V +P++ T+E+++ F G++E C +I++KTTGE
Sbjct: 10 ARSSGSHRDVEDEELTRIFV-MIPKSYTEEDLRDKFKVYGDIEYCSIIKNKTTGE 63
>gi|21667634|gb|AAM74138.1|AF497746_1 U-rich RNA-binding protein UBP-2 [Trypanosoma cruzi]
Length = 166
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 30 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVADRET 66
>gi|32482127|gb|AAP84414.1| FCA protein [Triticum aestivum]
Length = 740
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ S LIV +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 119 NKSSYVKLIVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 163
>gi|71667167|ref|XP_820535.1| U-rich RNA-binding protein UBP-2 [Trypanosoma cruzi strain CL
Brener]
gi|70885884|gb|EAN98684.1| U-rich RNA-binding protein UBP-2 [Trypanosoma cruzi]
Length = 166
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 30 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVADRET 66
>gi|344338389|ref|ZP_08769321.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
gi|343801671|gb|EGV19613.1| RNP-1 like RNA-binding protein [Thiocapsa marina 5811]
Length = 90
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +TQ+E+K+ FS+ GE+ S LI DK TGE
Sbjct: 2 NIYVGNLAYGVTQDELKTAFSAYGEISSVNLITDKFTGE 40
>gi|343475984|emb|CCD12779.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 230
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+E + LIVNYL +T ++ LFS GE++ ++I DK T
Sbjct: 125 DERYRKQLIVNYLAPDVTSSDLHELFSRFGELDGARIIYDKQT 167
>gi|340055675|emb|CCC49996.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 171
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 35 LIVNYLPQ------TMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFA 82
+ V LP+ T T EE+ F+ G++ +C L+RD+TTGEL A FA
Sbjct: 93 IFVGNLPKGENGGPTSTPEELAQFFADCGQILNCTLLRDRTTGELKGTAYIEFA 146
>gi|432104153|gb|ELK30980.1| ELAV-like protein 4 [Myotis davidii]
Length = 268
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 34 ANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 72
>gi|149192518|ref|ZP_01870698.1| RNA-binding protein [Vibrio shilonii AK1]
gi|148833650|gb|EDL50707.1| RNA-binding protein [Vibrio shilonii AK1]
Length = 151
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKTN--LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
G + V ++AS TPS E +K+ L V LP + +K LF+ GEV + +L++
Sbjct: 36 GVVATFFVVKFSTASPTPSAETTKSTKTLYVGNLPYKANESHVKELFAEHGEVFAVRLMK 95
Query: 67 DKTTGE 72
DK TG+
Sbjct: 96 DKRTGK 101
>gi|340059437|emb|CCC53821.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 131
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P + N+ + LP T T EE+++LFS G++ S L++DK TG
Sbjct: 9 PLDPPYVRNVYIASLPPTYTDEELRNLFSPFGKIVSTALVKDKRTG 54
>gi|395750501|ref|XP_002828742.2| PREDICTED: ELAV-like protein 3 [Pongo abelii]
Length = 275
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 37 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 75
>gi|432951189|ref|XP_004084740.1| PREDICTED: RNA-binding protein 45-like [Oryzias latipes]
Length = 463
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E+ + I +P+T T+E++K+ F G++E C +I++K TGE
Sbjct: 108 EDEELTRIFVMIPKTFTEEDLKNTFKEYGDIEYCVIIKNKLTGE 151
>gi|408358348|gb|AFU54936.1| ELAV-like protein 4, partial [Trachemys scripta elegans]
Length = 202
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 48 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 85
>gi|344342838|ref|ZP_08773708.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343805390|gb|EGV23286.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +TQEE++++F++ GE+ S LI DK TGE
Sbjct: 2 NIYVGNLAYGVTQEELQAVFAAYGEISSVNLITDKFTGE 40
>gi|358421488|ref|XP_003584982.1| PREDICTED: eLAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)-like, partial [Bos
taurus]
Length = 224
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 15 NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 52
>gi|302835535|ref|XP_002949329.1| hypothetical protein VOLCADRAFT_36996 [Volvox carteri f.
nagariensis]
gi|300265631|gb|EFJ49822.1| hypothetical protein VOLCADRAFT_36996 [Volvox carteri f.
nagariensis]
Length = 124
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ V ++P T+ E++ LFS+ GEV C +I D+ TG
Sbjct: 1 VYVGFIPHHTTEHELRQLFSTCGEVADCSIITDRHTG 37
>gi|456825005|gb|EMF73401.1| hypothetical protein LEP1GSC148_1225 [Leptospira interrogans
serovar Canicola str. LT1962]
Length = 98
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q S E + V LPQ +T++E+K +FS G VE + +DKTTG
Sbjct: 2 QIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTG 49
>gi|381393738|ref|ZP_09919457.1| RNA-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379330632|dbj|GAB54590.1| RNA-binding protein [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 78
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++V L +T TQEE+ LF++ GEV C L+ D+ TGE
Sbjct: 3 ILVRNLARTTTQEEISVLFTAQGEVTECTLVLDQKTGE 40
>gi|1144009|gb|AAC53000.1| mHuC-S, partial [Mus musculus]
Length = 275
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 41 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 78
>gi|401415560|ref|XP_003872275.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488499|emb|CBZ23745.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 210
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCK 63
P QN HN + PSN+E + LIVNYL Q ++ ++ +LF+ G ++ +
Sbjct: 89 PDQNALRHNRT-----QMVPVPSNDERYRKQLIVNYLAQDVSSADLHTLFARFGPLDGAR 143
Query: 64 LIRDKTT 70
+I D+ T
Sbjct: 144 IIFDRQT 150
>gi|258405611|ref|YP_003198353.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
gi|257797838|gb|ACV68775.1| RNP-1 like RNA-binding protein [Desulfohalobium retbaense DSM
5692]
Length = 86
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E++S F + GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPFSATEDEVRSAFGAYGEVTSVKLIEDRETG 41
>gi|148910359|gb|ABR18258.1| unknown [Picea sitchensis]
Length = 970
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ + V YLP TM +E++ LFSS G + K+IRD G
Sbjct: 696 STVYVGYLPPTMEEEQLIKLFSSFGRIVEAKVIRDDVKG 734
>gi|398013681|ref|XP_003860032.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
gi|322498251|emb|CBZ33325.1| hypothetical protein, unknown function, partial [Leishmania
donovani]
Length = 123
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S + + S+S TPS+ TNL V YLP+ + ++ +FS+ G++ S ++RD +G+
Sbjct: 5 SQHQYKSSSFTPSS----TNLFVRYLPREVDDNRLREIFSAFGKITSSMVMRDIYSGQ 58
>gi|157870506|ref|XP_001683803.1| putative RNA-binding protein, UPB2 [Leishmania major strain
Friedlin]
gi|68126870|emb|CAJ04748.1| putative RNA-binding protein, UPB2 [Leishmania major strain
Friedlin]
Length = 167
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 26 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 66
>gi|146088553|ref|XP_001466082.1| RNA-binding protein, putative, UPB2 [Leishmania infantum JPCM5]
gi|398016386|ref|XP_003861381.1| RNA-binding protein, putative, UPB2 [Leishmania donovani]
gi|134070184|emb|CAM68519.1| RNA-binding protein, putative, UPB2 [Leishmania infantum JPCM5]
gi|322499607|emb|CBZ34681.1| RNA-binding protein, putative, UPB2 [Leishmania donovani]
Length = 167
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 26 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 66
>gi|159162195|pdb|1D9A|A Chain A, Solution Structure Of The Second Rna-Binding Domain
(Rbd2) Of Hu Antigen C (Huc)
Length = 85
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 2 ANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 40
>gi|242280537|ref|YP_002992666.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242123431|gb|ACS81127.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E+++ F + GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEDEVRAAFEAFGEVVSVKLIEDRETG 41
>gi|407847063|gb|EKG02962.1| RNA-binding protein 4, putative [Trypanosoma cruzi]
Length = 489
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEV--ESCKLIRDK 68
+ +KT LIVN+LPQ +T + + LF+ GE+ + K+I D+
Sbjct: 388 DTTKTQLIVNFLPQFLTDDGFRELFTPFGEIHTKPTKIIYDR 429
>gi|71407049|ref|XP_806018.1| RNA-binding protein 6 [Trypanosoma cruzi strain CL Brener]
gi|70869638|gb|EAN84167.1| RNA-binding protein 6, putative [Trypanosoma cruzi]
Length = 243
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 9 GSLHNSSVNS--HNSASQTPSNEES-KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
G H NS + + PSN+E + LIVNYL + E+ LFS G ++ ++I
Sbjct: 120 GGYHQMGHNSTQRHQTTPVPSNDERYRKQLIVNYLAPDVVSAELHGLFSRFGPLDGARII 179
Query: 66 RDKTT 70
D+ T
Sbjct: 180 HDRQT 184
>gi|401423233|ref|XP_003876103.1| RNA-binding protein, putative, UPB2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492344|emb|CBZ27618.1| RNA-binding protein, putative, UPB2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 167
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 26 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 66
>gi|260773862|ref|ZP_05882777.1| RNA-binding protein [Vibrio metschnikovii CIP 69.14]
gi|260610823|gb|EEX36027.1| RNA-binding protein [Vibrio metschnikovii CIP 69.14]
Length = 78
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L+V L +T T+++++ LFS+ GEV++C L+ D+ TG
Sbjct: 3 LLVRNLSRTTTEQDIRVLFSAFGEVKACNLVLDQITG 39
>gi|71667199|ref|XP_820551.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885900|gb|EAN98700.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 224
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
H +Q + NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 29 HIPPAQMNPEPDVLRNLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRET 80
>gi|71401800|ref|XP_803891.1| RNA-binding protein 4 [Trypanosoma cruzi strain CL Brener]
gi|70866543|gb|EAN82040.1| RNA-binding protein 4, putative [Trypanosoma cruzi]
Length = 489
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEV--ESCKLIRDK 68
+ +KT LIVN+LPQ +T + + LF+ GE+ + K+I D+
Sbjct: 388 DTTKTQLIVNFLPQFLTDDGFRELFTPFGEIHTKPTKIIYDR 429
>gi|401423231|ref|XP_003876102.1| RNA-binding protein, putative, UPB1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492343|emb|CBZ27617.1| RNA-binding protein, putative, UPB1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 174
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 33 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 73
>gi|157870504|ref|XP_001683802.1| putative RNA-binding protein, UPB1 [Leishmania major strain
Friedlin]
gi|68126869|emb|CAJ04738.1| putative RNA-binding protein, UPB1 [Leishmania major strain
Friedlin]
Length = 177
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 36 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 76
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
SNEE+KT + V L M + + + FS GEV S K+IR+K TG+L
Sbjct: 60 SNEEAKT-IWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQL 105
>gi|237832459|ref|XP_002365527.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|211963191|gb|EEA98386.1| RNA recognition motif domain-containing protein [Toxoplasma gondii
ME49]
gi|221487976|gb|EEE26190.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii GT1]
gi|221508501|gb|EEE34070.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 648
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELNGLHSQ 91
+ L V +P+TM+++E++ F + G VE +++D TG A F + GLH+
Sbjct: 204 QAKLFVGSIPRTMSEDELRLFFQTYGTVEEVFVMKDSATGTGKGCAFVKFKYKEEGLHAM 263
Query: 92 TERSRKSMF 100
+ K +F
Sbjct: 264 RNLNGKHVF 272
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
L V +P T+ +E ++ +F S GEV +IRDK+T
Sbjct: 104 LFVGRVPHTVDEEALRPIFESFGEVREVFVIRDKST 139
>gi|407407807|gb|EKF31477.1| RNA-binding protein 4, putative [Trypanosoma cruzi marinkellei]
Length = 490
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEV--ESCKLIRDK 68
+ +KT LIVN+LPQ +T + + LF+ GE+ + K+I D+
Sbjct: 385 DTTKTQLIVNFLPQFLTDDGFRELFTPFGEIHTKPTKIIYDR 426
>gi|395837211|ref|XP_003791534.1| PREDICTED: RNA-binding protein 45 [Otolemur garnettii]
Length = 474
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFVT-IPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|123399974|ref|XP_001301574.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121882772|gb|EAX88644.1| hypothetical protein TVAG_023270 [Trichomonas vaginalis G3]
Length = 245
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E TN+ +NY+P Q+++K+L S GE+ CK++ + TG+
Sbjct: 42 EPSTNVFINYIPPNYNQDDLKNLCSQYGEIVCCKIMINLETGQ 84
>gi|72391404|ref|XP_845996.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175909|gb|AAX70033.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70802532|gb|AAZ12437.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 340
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLIVNY+P +T+E+++ LF G + S ++I D+ G
Sbjct: 9 NLIVNYIPTPVTEEDLEELFRPFGPLVSVRIICDRENG 46
>gi|407408741|gb|EKF32062.1| RNA-binding protein 6, putative [Trypanosoma cruzi marinkellei]
Length = 224
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 44 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRET 80
>gi|261329508|emb|CBH12490.1| RNA-binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 340
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NLIVNY+P +T+E+++ LF G + S ++I D+ G
Sbjct: 9 NLIVNYIPTPVTEEDLEELFRPFGPLVSVRIICDRENG 46
>gi|145344842|ref|XP_001416933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577159|gb|ABO95226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ A+ TPS+ NL V + + + + ++ LF + GEV+SC +IRD +T
Sbjct: 4 DGQGYAATTPSSSRKHANLYVKNISERVDELTLRRLFEACGEVQSCCVIRDVST 57
>gi|14091677|gb|AAK53819.1| RNA-binding protein UBP1 [Trypanosoma cruzi]
gi|31074961|gb|AAP42139.1| RNA-binding protein UBP-1 [Trypanosoma cruzi]
Length = 224
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 44 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRET 80
>gi|374300202|ref|YP_005051841.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332553138|gb|EGJ50182.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 101
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V LP + EE+++LFS+ GEV+S LI D+ TG L
Sbjct: 5 LYVGNLPFSTYDEEIRNLFSAYGEVKSVSLITDRETGRL 43
>gi|322798651|gb|EFZ20255.1| hypothetical protein SINV_12300 [Solenopsis invicta]
Length = 178
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 5 PQQNGSLHNSSVNSHNSA--------SQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFS 54
P + GS+ + H+ A + P N ESK L V L +T+ ++K LFS
Sbjct: 16 PLKAGSIDGTDTQPHDKAISRALLMHYEPPHNLESKPERTLFVARLGPKVTKYDLKELFS 75
Query: 55 SVGEVESCKLIRDKTTG 71
GEV S K+I D TG
Sbjct: 76 KYGEVISAKVIVDVVTG 92
>gi|398336621|ref|ZP_10521326.1| RNA-binding protein [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 131
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q S E + V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 2 QIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVQEAHIKKDKTTG 49
>gi|407410492|gb|EKF32904.1| RNA-binding protein 6, putative [Trypanosoma cruzi marinkellei]
Length = 240
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 9 GSLHNSSVNS--HNSASQTPSNEE-SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI 65
G H NS + + PSN+E + LIVNYL + E+ LFS G ++ ++I
Sbjct: 117 GGYHQMGHNSTQRHQTTTVPSNDERCRKQLIVNYLAPDVVSAELHGLFSRFGPLDGARII 176
Query: 66 RDKTT 70
D+ T
Sbjct: 177 HDRQT 181
>gi|59713669|ref|YP_206444.1| hypothetical protein VF_A0486 [Vibrio fischeri ES114]
gi|197336705|ref|YP_002158085.1| RNP-1 like RNA-binding protein [Vibrio fischeri MJ11]
gi|423687803|ref|ZP_17662606.1| RNP-1 like RNA-binding protein [Vibrio fischeri SR5]
gi|59481917|gb|AAW87556.1| hypothetical protein VF_A0486 [Vibrio fischeri ES114]
gi|197313957|gb|ACH63406.1| RNP-1 like RNA-binding protein [Vibrio fischeri MJ11]
gi|371492991|gb|EHN68595.1| RNP-1 like RNA-binding protein [Vibrio fischeri SR5]
Length = 78
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L+V LP+TM++ E++ +F GE + CK++ D+ TGE
Sbjct: 2 KLLVRNLPRTMSEFELREMFKKHGEFKYCKIVLDEITGE 40
>gi|71754457|ref|XP_828143.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833529|gb|EAN79031.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261333939|emb|CBH16933.1| RNA-binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 175
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 39 NLMVNYIPTTVDEVQLRQLFERFGPIESVKIVCDRET 75
>gi|86607423|ref|YP_476186.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86555965|gb|ABD00923.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 181
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L V LP+ + ++ ++ LFSS GEV S K+IRD+ TG+
Sbjct: 3 VRLYVGNLPEEVDRQALEKLFSSAGEVISTKVIRDRRTGK 42
>gi|333983823|ref|YP_004513033.1| RNP-1 like RNA-binding protein [Methylomonas methanica MC09]
gi|333807864|gb|AEG00534.1| RNP-1 like RNA-binding protein [Methylomonas methanica MC09]
Length = 87
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L++ LP++ T+ E+++LF+ G V+SC L+ DK TG
Sbjct: 2 KLLIRNLPRSTTEAELRALFAEHGAVQSCSLVIDKETG 39
>gi|261333936|emb|CBH16930.1| RNA-binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 218
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 61 NLMVNYIPTTVDEVQLRQLFERFGAIESVKIVCDRET 97
>gi|71754455|ref|XP_828142.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833528|gb|EAN79030.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 219
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 62 NLMVNYIPTTVDEVQLRQLFERFGAIESVKIVCDRET 98
>gi|374583239|ref|ZP_09656333.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
youngiae DSM 17734]
gi|374419321|gb|EHQ91756.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
youngiae DSM 17734]
Length = 83
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG--------ELSVVANSIFAPE 84
T L V LP T EE+ FS+ G+VES ++I D+ TG E+ + + A E
Sbjct: 3 TTLYVGNLPWNTTAEELGEFFSAYGQVESSRIITDRETGRSRGFGFIEVEEMDAARMAEE 62
Query: 85 LNG 87
LNG
Sbjct: 63 LNG 65
>gi|154338656|ref|XP_001565550.1| RNA-binding protein, putative, UPB1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062602|emb|CAM39044.1| RNA-binding protein, putative, UPB1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 169
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E+ K++ D+ T
Sbjct: 26 EALRNLMVNYIPTTVDEMQLRQLFERYGPIETVKIVCDRET 66
>gi|290985168|ref|XP_002675298.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
gi|284088893|gb|EFC42554.1| hypothetical protein NAEGRDRAFT_80404 [Naegleria gruberi]
Length = 641
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
N+ V YLP + E+++ LF+ GE+ SC ++ DKT
Sbjct: 123 NVFVKYLPPHFSDEDLRELFTPFGEIVSCHVMTDKT 158
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 23 SQTPSNEESKT----NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S +P ++ SK+ NL + +LP + ++ LFS GE+ES K+IRD T
Sbjct: 462 SSSPEDKNSKSGETANLFIFHLPGDVDDSKLMELFSKFGEIESVKVIRDPKT 513
>gi|374997451|ref|YP_004972950.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
orientis DSM 765]
gi|357215817|gb|AET70435.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
orientis DSM 765]
Length = 83
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG--------ELSVVANSIFAPE 84
T L V LP T EE+ FS+ G+VES ++I D+ TG E+ + A E
Sbjct: 3 TTLYVGNLPWNTTAEELGEFFSAYGQVESSRIITDRETGRSRGFGFIEVEDADAARMAEE 62
Query: 85 LNG 87
LNG
Sbjct: 63 LNG 65
>gi|71419814|ref|XP_811281.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70875928|gb|EAN89430.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 340
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
PS + + NLIVNY+P ++ E ++ +F G + S ++IRDK
Sbjct: 2 PSGGDPR-NLIVNYIPTPVSDESLREMFEKFGTLVSARVIRDK 43
>gi|154338654|ref|XP_001565549.1| RNA-binding protein, putative, UPB2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062601|emb|CAM39043.1| RNA-binding protein, putative, UPB2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 168
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E+ K++ D+ T
Sbjct: 25 EALRNLMVNYIPTTVDEMQLRQLFERYGPIETVKIVCDRET 65
>gi|71657779|ref|XP_817399.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70882589|gb|EAN95548.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 340
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
PS + + NLIVNY+P ++ E ++ +F G + S ++IRDK
Sbjct: 2 PSGGDPR-NLIVNYIPTPVSDESLREMFEKFGTLVSARVIRDK 43
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
S ++ S++ +TNL + LP+T+T E++ +F G + ++RDK TG VA
Sbjct: 140 SYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGHPRGVA 196
>gi|18399023|ref|NP_565450.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|20197017|gb|AAC16468.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|330251780|gb|AEC06874.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELNGLHS 90
++ N+ V TQE +K+ F S GE+E C ++ DK TG +F G
Sbjct: 406 AQRNIFVRGFGWDTTQENLKTAFESYGEIEECSVVMDKDTGRGKGYGFVMFKTR-KGARE 464
Query: 91 QTERSRKSMF 100
+R K M+
Sbjct: 465 ALKRPEKRMY 474
>gi|293332827|ref|NP_001169335.1| uncharacterized protein LOC100383202 [Zea mays]
gi|224028769|gb|ACN33460.1| unknown [Zea mays]
gi|413918115|gb|AFW58047.1| hypothetical protein ZEAMMB73_457780 [Zea mays]
Length = 714
Score = 40.8 bits (94), Expect = 0.095, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+TNL + YLP TM + + SLFS G++ K+I+D+ TG+
Sbjct: 419 ETNLYIGYLPPTMDDDGLVSLFSQFGDIVMAKVIKDRNTGQ 459
>gi|406597827|ref|YP_006748957.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
gi|406375148|gb|AFS38403.1| hypothetical protein MASE_14495 [Alteromonas macleodii ATCC
27126]
Length = 117
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++V LP+T TQE ++ LF G + SC L+ D+ TG
Sbjct: 3 ILVRNLPKTFTQENLEDLFFEFGTIASCDLVMDEATG 39
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
SNEE+KT + V L M + + + FS GEV S K+IR+K TG+L
Sbjct: 75 SNEEAKT-VWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQL 120
>gi|308456493|ref|XP_003090683.1| CRE-ETR-1 protein [Caenorhabditis remanei]
gi|308261154|gb|EFP05107.1| CRE-ETR-1 protein [Caenorhabditis remanei]
Length = 612
Score = 40.8 bits (94), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + ++E ++ +FS G
Sbjct: 71 DAIEAQ-GALHNIKVIDGMHHPVQMKPADTENRNERKLFIGQLSKKHSEENLREIFSKFG 129
Query: 58 EVESCKLIRD 67
++E C ++RD
Sbjct: 130 QIEDCSVLRD 139
>gi|342185184|emb|CCC94667.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 210
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 56 NLMVNYIPTTVDEVQLRQLFERFGPIESVKIVCDRET 92
>gi|339898461|ref|XP_003392595.1| RNA-binding protein, putative, UPB1 [Leishmania infantum JPCM5]
gi|321398349|emb|CBZ08764.1| RNA-binding protein, putative, UPB1 [Leishmania infantum JPCM5]
Length = 233
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
E+ NL+VNY+P T+ + +++ LF G +E K++ D+ T
Sbjct: 92 EALRNLMVNYIPTTVDEVQLRQLFERFGPIEGVKIVCDRET 132
>gi|241608253|ref|XP_002406562.1| conserved hypothetical protein [Ixodes scapularis]
gi|215502676|gb|EEC12170.1| conserved hypothetical protein [Ixodes scapularis]
Length = 270
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL V+ LP++MTQ++++ LFS G + + +++ D TG
Sbjct: 40 PSSEAIKGANLYVSGLPKSMTQQDLEGLFSPYGRIITSRILCDNITG 86
>gi|60593585|pdb|1U6F|A Chain A, Nmr Solution Structure Of Tcubp1, A Single Rbd-Unit From
Trypanosoma Cruzi
Length = 139
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 44 NLMVNYIPTTVDEVQLRQLFERYGPIESVKIVCDRET 80
>gi|300120548|emb|CBK20102.2| unnamed protein product [Blastocystis hominis]
Length = 534
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V + QT+T E ++ +F + G +ESC + RDK T EL
Sbjct: 275 LYVGFGDQTITLERLREIFQAYGNIESCSIARDKNTKEL 313
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
K NL V LP MT +E+ FS+ G + SCK+ DK TG+
Sbjct: 76 KGNLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGK 116
>gi|407833107|gb|EKF98686.1| RNA-binding protein 6, putative, partial [Trypanosoma cruzi]
Length = 199
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
PS + + NLIVNY+P ++ E ++ +F G + S ++IRDK
Sbjct: 2 PSGGDPR-NLIVNYIPTPVSDESLREMFEKFGTLVSARVIRDK 43
>gi|426220800|ref|XP_004004600.1| PREDICTED: RNA-binding protein 45 [Ovis aries]
Length = 469
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 101 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGE 154
>gi|32489985|emb|CAE05015.1| OSJNBa0044M19.2 [Oryza sativa Japonica Group]
Length = 650
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E +TNL + YLP T+ + LFS GE+ K+IRD+ TG+
Sbjct: 303 EYDETNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQ 346
>gi|351714400|gb|EHB17319.1| RNA-binding protein 45, partial [Heterocephalus glaber]
Length = 449
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 81 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 134
>gi|195539519|ref|NP_001124225.1| RNA-binding protein 45 [Bos taurus]
gi|158455010|gb|AAI05263.2| RBM45 protein [Bos taurus]
gi|296490712|tpg|DAA32825.1| TPA: RNA binding motif protein 45 [Bos taurus]
Length = 474
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGE 159
>gi|343471891|emb|CCD15797.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 163
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL+VNY+P T+ + +++ LF G +ES K++ D+ T
Sbjct: 29 NLMVNYIPTTVDEVQLRQLFERFGPIESVKIVCDRET 65
>gi|125548044|gb|EAY93866.1| hypothetical protein OsI_15642 [Oryza sativa Indica Group]
Length = 684
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E +TNL + YLP T+ + LFS GE+ K+IRD+ TG+
Sbjct: 335 EYDETNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQ 378
>gi|348585642|ref|XP_003478580.1| PREDICTED: RNA-binding protein 45-like [Cavia porcellus]
Length = 480
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 110 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 163
>gi|328875992|gb|EGG24356.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 770
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
N S+ PSN NL V LP T+T +++ LF GE+ CK++ DK
Sbjct: 168 NHNSKYPSN-----NLFVKPLPATLTDGQLRDLFQGFGEIVECKVMVDK 211
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
TNL V +LP + + LFS G ++S ++I DK TGE
Sbjct: 628 TNLFVFHLPSFVDDVYLYKLFSQYGPLQSVRVIMDKETGE 667
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
E+ +TN+ V YLP E+ +LF+ G+V S K++ D
Sbjct: 84 EKDQTNVFVKYLPNEFGDSELHNLFTQFGKVMSAKVMVD 122
>gi|93277070|ref|NP_694453.2| RNA-binding protein 45 [Homo sapiens]
gi|197102268|ref|NP_001125039.1| RNA-binding protein 45 [Pongo abelii]
gi|114581944|ref|XP_515938.2| PREDICTED: RNA-binding protein 45 [Pan troglodytes]
gi|397489084|ref|XP_003815567.1| PREDICTED: RNA-binding protein 45 [Pan paniscus]
gi|46362414|gb|AAH66549.1| RNA binding motif protein 45 [Homo sapiens]
gi|55726771|emb|CAH90147.1| hypothetical protein [Pongo abelii]
gi|119631451|gb|EAX11046.1| developmentally regulated RNA-binding protein 1, isoform CRA_c
[Homo sapiens]
gi|312150926|gb|ADQ31975.1| developmentally regulated RNA-binding protein 1 [synthetic
construct]
gi|410218046|gb|JAA06242.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410261936|gb|JAA18934.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410291320|gb|JAA24260.1| RNA binding motif protein 45 [Pan troglodytes]
gi|410354099|gb|JAA43653.1| RNA binding motif protein 45 [Pan troglodytes]
Length = 474
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|407396775|gb|EKF27539.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 341
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
PS + + NLIVNY+P ++ E ++ +F G + S ++IRDK
Sbjct: 2 PSGGDPR-NLIVNYIPTPVSDETLREMFEKFGTLVSARVIRDK 43
>gi|22001377|gb|AAM88417.1|AF526533_1 putative RNA binding protein RB-1 [Homo sapiens]
Length = 328
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|355750658|gb|EHH54985.1| hypothetical protein EGM_04104 [Macaca fascicularis]
Length = 475
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 105 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 158
>gi|2204093|emb|CAB05390.1| FCA beta [Arabidopsis thaliana]
gi|2204097|emb|CAB05393.1| FCA alpha and FCA beta [Arabidopsis thaliana]
gi|2204099|emb|CAB05394.1| FCA alpha 1 [Arabidopsis thaliana]
gi|5302787|emb|CAB46036.1| FCA alpha and beta protein [Arabidopsis thaliana]
gi|7268379|emb|CAB78672.1| FCA alpha and beta protein [Arabidopsis thaliana]
Length = 260
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 94 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 153
Query: 67 DKTTGE 72
DK TG+
Sbjct: 154 DKRTGQ 159
>gi|59797947|sp|Q8IUH3.1|RBM45_HUMAN RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
Short=RB-1; AltName: Full=RNA-binding motif protein 45
gi|22831322|dbj|BAC16207.1| developmentally regulated RNA-binding protein 1 [Homo sapiens]
Length = 476
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|398338873|ref|ZP_10523576.1| RNA-binding protein [Leptospira kirschneri serovar Bim str. 1051]
gi|418676923|ref|ZP_13238201.1| hypothetical protein LEP1GSC044_1926 [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|418687871|ref|ZP_13249028.1| hypothetical protein LEP1GSC064_4054 [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|418695099|ref|ZP_13256125.1| hypothetical protein LEP1GSC081_3619 [Leptospira kirschneri str.
H1]
gi|418742675|ref|ZP_13299045.1| hypothetical protein LEP1GSC122_3581 [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
gi|421130710|ref|ZP_15590902.1| hypothetical protein LEP1GSC018_2687 [Leptospira kirschneri str.
2008720114]
gi|400322823|gb|EJO70679.1| hypothetical protein LEP1GSC044_1926 [Leptospira kirschneri
serovar Grippotyphosa str. RM52]
gi|409957258|gb|EKO16173.1| hypothetical protein LEP1GSC081_3619 [Leptospira kirschneri str.
H1]
gi|410357813|gb|EKP05018.1| hypothetical protein LEP1GSC018_2687 [Leptospira kirschneri str.
2008720114]
gi|410737295|gb|EKQ82036.1| hypothetical protein LEP1GSC064_4054 [Leptospira kirschneri
serovar Grippotyphosa str. Moskva]
gi|410750050|gb|EKR07033.1| hypothetical protein LEP1GSC122_3581 [Leptospira kirschneri
serovar Valbuzzi str. 200702274]
Length = 131
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q S E + V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 2 QIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 49
>gi|291391816|ref|XP_002712356.1| PREDICTED: RNA binding motif protein 45 isoform 2 [Oryctolagus
cuniculus]
Length = 483
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|194222346|ref|XP_001917559.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 45 [Equus
caballus]
Length = 452
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 84 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 137
>gi|403258671|ref|XP_003921876.1| PREDICTED: RNA-binding protein 45 [Saimiri boliviensis boliviensis]
Length = 474
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|332209442|ref|XP_003253821.1| PREDICTED: uncharacterized protein LOC100594857 [Nomascus
leucogenys]
Length = 474
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|297264420|ref|XP_001097905.2| PREDICTED: RNA-binding protein 45-like [Macaca mulatta]
Length = 476
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|402888753|ref|XP_003907713.1| PREDICTED: RNA-binding protein 45 [Papio anubis]
gi|380785205|gb|AFE64478.1| RNA-binding protein 45 [Macaca mulatta]
Length = 474
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|444723102|gb|ELW63766.1| RNA-binding protein 45 [Tupaia chinensis]
Length = 414
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|291391814|ref|XP_002712355.1| PREDICTED: RNA binding motif protein 45 isoform 1 [Oryctolagus
cuniculus]
Length = 474
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|417401553|gb|JAA47659.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 474
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|390464344|ref|XP_002749320.2| PREDICTED: RNA-binding protein 45-like [Callithrix jacchus]
Length = 473
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|381157372|ref|ZP_09866606.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp.
970]
gi|380881235|gb|EIC23325.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp.
970]
Length = 94
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +TQ+E++ F++ G+VES LI DK TG+
Sbjct: 2 NIYVGNLAYGVTQDELRDAFAAYGDVESANLITDKFTGQ 40
>gi|157959996|ref|YP_001500030.1| RNP-1 like RNA-binding protein [Shewanella pealeana ATCC 700345]
gi|157844996|gb|ABV85495.1| RNP-1 like RNA-binding protein [Shewanella pealeana ATCC 700345]
Length = 151
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 15 SVNSHNSASQTPSNEESK---TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+ S AS T SNE L V LP + + E+K+LF G V S +L+RD+ TG
Sbjct: 44 SLQSKTPASTTNSNEPYSGPTMTLYVGNLPYRVHEGEVKALFGEFGPVNSVRLVRDRKTG 103
Query: 72 E 72
Sbjct: 104 R 104
>gi|410940631|ref|ZP_11372434.1| hypothetical protein LEP1GSC041_4407 [Leptospira noguchii str.
2006001870]
gi|410784258|gb|EKR73246.1| hypothetical protein LEP1GSC041_4407 [Leptospira noguchii str.
2006001870]
Length = 131
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
Q S E + V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 2 QIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 49
>gi|327398778|ref|YP_004339647.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
gi|327181407|gb|AEA33588.1| RNP-1 like RNA-binding protein [Hippea maritima DSM 10411]
Length = 86
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LP + T++E+K LF GEV S K+I D+ TG
Sbjct: 5 LYVGNLPYSTTEDELKELFGEYGEVSSTKIITDRETG 41
>gi|345797183|ref|XP_535977.3| PREDICTED: RNA-binding protein 45 [Canis lupus familiaris]
Length = 476
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|345869335|ref|ZP_08821293.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343923258|gb|EGV33950.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 82
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
LIV L ++ T++E+K+LF G V+ C L+ DK TG
Sbjct: 3 LIVRNLDRSTTEDELKTLFQEYGAVQYCDLVLDKATG 39
>gi|126640516|ref|YP_001083500.1| RNA-binding protein [Acinetobacter baumannii ATCC 17978]
gi|184156772|ref|YP_001845111.1| RNA-binding protein [Acinetobacter baumannii ACICU]
gi|260556194|ref|ZP_05828413.1| RNA-binding protein [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|332852995|ref|ZP_08434505.1| hypothetical protein HMPREF0021_02087 [Acinetobacter baumannii
6013150]
gi|332866445|ref|ZP_08437014.1| hypothetical protein HMPREF0020_00620 [Acinetobacter baumannii
6013113]
gi|332873184|ref|ZP_08441141.1| hypothetical protein HMPREF0022_00746 [Acinetobacter baumannii
6014059]
gi|384130444|ref|YP_005513056.1| RNA-binding protein [Acinetobacter baumannii 1656-2]
gi|384141729|ref|YP_005524439.1| putative RNA-binding protein [Acinetobacter baumannii MDR-ZJ06]
gi|385236042|ref|YP_005797381.1| RNA-binding protein [Acinetobacter baumannii TCDC-AB0715]
gi|416150846|ref|ZP_11603493.1| RNA-binding protein [Acinetobacter baumannii AB210]
gi|417575282|ref|ZP_12226135.1| hypothetical protein ACINBC5_A0717 [Acinetobacter baumannii
Canada BC-5]
gi|421651040|ref|ZP_16091412.1| hypothetical protein ACIN5162_0430 [Acinetobacter baumannii
OIFC0162]
gi|445446735|ref|ZP_21443366.1| hypothetical protein ACINWCA92_0516 [Acinetobacter baumannii
WC-A-92]
gi|183208366|gb|ACC55764.1| RNA-binding protein (RRM domain) [Acinetobacter baumannii ACICU]
gi|260410249|gb|EEX03548.1| RNA-binding protein [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|322506664|gb|ADX02118.1| RNA-binding protein [Acinetobacter baumannii 1656-2]
gi|323516539|gb|ADX90920.1| RNA-binding protein [Acinetobacter baumannii TCDC-AB0715]
gi|332728931|gb|EGJ60286.1| hypothetical protein HMPREF0021_02087 [Acinetobacter baumannii
6013150]
gi|332734602|gb|EGJ65709.1| hypothetical protein HMPREF0020_00620 [Acinetobacter baumannii
6013113]
gi|332738696|gb|EGJ69566.1| hypothetical protein HMPREF0022_00746 [Acinetobacter baumannii
6014059]
gi|333363821|gb|EGK45835.1| RNA-binding protein [Acinetobacter baumannii AB210]
gi|347592222|gb|AEP04943.1| putative RNA-binding protein [Acinetobacter baumannii MDR-ZJ06]
gi|400206015|gb|EJO36995.1| hypothetical protein ACINBC5_A0717 [Acinetobacter baumannii
Canada BC-5]
gi|408509052|gb|EKK10728.1| hypothetical protein ACIN5162_0430 [Acinetobacter baumannii
OIFC0162]
gi|444759677|gb|ELW84139.1| hypothetical protein ACINWCA92_0516 [Acinetobacter baumannii
WC-A-92]
Length = 86
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NE K ++V L +++T+ E+ LF + G+VESC ++ DK TG+
Sbjct: 3 NEGWKMKILVRNLDRSVTEAEVLELFKAYGKVESCVVVTDKDTGK 47
>gi|125590156|gb|EAZ30506.1| hypothetical protein OsJ_14553 [Oryza sativa Japonica Group]
Length = 684
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E +TNL + YLP T+ + LFS GE+ K+IRD+ TG+
Sbjct: 335 EYDETNLYIGYLPPTLDDSGLIGLFSQFGEIVMAKVIRDRITGQ 378
>gi|431894949|gb|ELK04742.1| RNA-binding protein 45 [Pteropus alecto]
Length = 474
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|410968924|ref|XP_003990949.1| PREDICTED: RNA-binding protein 45 [Felis catus]
Length = 474
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|374298432|ref|YP_005050071.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332551368|gb|EGJ48412.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 104
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V LP T T++++++LF++ G V S KLI D+ TG
Sbjct: 4 NLYVGNLPFTATEDDIRNLFATHGNVNSVKLISDRETG 41
>gi|87082528|gb|ABD18761.1| sex-lethal [Drosophila simulans]
gi|87082530|gb|ABD18762.1| sex-lethal [Drosophila simulans]
gi|87082532|gb|ABD18763.1| sex-lethal [Drosophila simulans]
gi|87082534|gb|ABD18764.1| sex-lethal [Drosophila simulans]
gi|87082536|gb|ABD18765.1| sex-lethal [Drosophila simulans]
gi|87082538|gb|ABD18766.1| sex-lethal [Drosophila simulans]
gi|87082540|gb|ABD18767.1| sex-lethal [Drosophila simulans]
gi|87082542|gb|ABD18768.1| sex-lethal [Drosophila simulans]
gi|87082544|gb|ABD18769.1| sex-lethal [Drosophila simulans]
gi|87082546|gb|ABD18770.1| sex-lethal [Drosophila simulans]
gi|87082548|gb|ABD18771.1| sex-lethal [Drosophila simulans]
gi|87082550|gb|ABD18772.1| sex-lethal [Drosophila simulans]
gi|87082552|gb|ABD18773.1| sex-lethal [Drosophila simulans]
gi|87082554|gb|ABD18774.1| sex-lethal [Drosophila simulans]
gi|87082556|gb|ABD18775.1| sex-lethal [Drosophila simulans]
gi|87082558|gb|ABD18776.1| sex-lethal [Drosophila simulans]
gi|87082560|gb|ABD18777.1| sex-lethal [Drosophila simulans]
gi|87082562|gb|ABD18778.1| sex-lethal [Drosophila simulans]
gi|87082564|gb|ABD18779.1| sex-lethal [Drosophila simulans]
gi|87082566|gb|ABD18780.1| sex-lethal [Drosophila simulans]
gi|87082568|gb|ABD18781.1| sex-lethal [Drosophila simulans]
gi|87082570|gb|ABD18782.1| sex-lethal [Drosophila simulans]
gi|87082572|gb|ABD18783.1| sex-lethal [Drosophila simulans]
gi|87082574|gb|ABD18784.1| sex-lethal [Drosophila simulans]
gi|87082576|gb|ABD18785.1| sex-lethal [Drosophila simulans]
gi|87082578|gb|ABD18786.1| sex-lethal [Drosophila simulans]
gi|87082580|gb|ABD18787.1| sex-lethal [Drosophila simulans]
gi|87082582|gb|ABD18788.1| sex-lethal [Drosophila simulans]
gi|87082584|gb|ABD18789.1| sex-lethal [Drosophila simulans]
gi|87082586|gb|ABD18790.1| sex-lethal [Drosophila simulans]
gi|87082588|gb|ABD18791.1| sex-lethal [Drosophila simulans]
gi|87082590|gb|ABD18792.1| sex-lethal [Drosophila simulans]
gi|87082592|gb|ABD18793.1| sex-lethal [Drosophila simulans]
gi|87082594|gb|ABD18794.1| sex-lethal [Drosophila simulans]
gi|87082596|gb|ABD18795.1| sex-lethal [Drosophila simulans]
gi|87082598|gb|ABD18796.1| sex-lethal [Drosophila simulans]
gi|87082600|gb|ABD18797.1| sex-lethal [Drosophila simulans]
gi|87082602|gb|ABD18798.1| sex-lethal [Drosophila simulans]
gi|87082604|gb|ABD18799.1| sex-lethal [Drosophila simulans]
gi|87082606|gb|ABD18800.1| sex-lethal [Drosophila simulans]
gi|87082608|gb|ABD18801.1| sex-lethal [Drosophila simulans]
gi|87082610|gb|ABD18802.1| sex-lethal [Drosophila simulans]
gi|87082612|gb|ABD18803.1| sex-lethal [Drosophila simulans]
gi|87082614|gb|ABD18804.1| sex-lethal [Drosophila simulans]
gi|87082616|gb|ABD18805.1| sex-lethal [Drosophila simulans]
gi|87082618|gb|ABD18806.1| sex-lethal [Drosophila simulans]
gi|87082620|gb|ABD18807.1| sex-lethal [Drosophila simulans]
gi|87082622|gb|ABD18808.1| sex-lethal [Drosophila simulans]
gi|87082624|gb|ABD18809.1| sex-lethal [Drosophila simulans]
gi|87082626|gb|ABD18810.1| sex-lethal [Drosophila simulans]
gi|87082628|gb|ABD18811.1| sex-lethal [Drosophila simulans]
gi|87082630|gb|ABD18812.1| sex-lethal [Drosophila simulans]
gi|87082632|gb|ABD18813.1| sex-lethal [Drosophila simulans]
gi|87082634|gb|ABD18814.1| sex-lethal [Drosophila simulans]
gi|87082636|gb|ABD18815.1| sex-lethal [Drosophila simulans]
gi|87082638|gb|ABD18816.1| sex-lethal [Drosophila simulans]
gi|87082640|gb|ABD18817.1| sex-lethal [Drosophila simulans]
gi|87082642|gb|ABD18818.1| sex-lethal [Drosophila simulans]
gi|87082644|gb|ABD18819.1| sex-lethal [Drosophila simulans]
gi|87082646|gb|ABD18820.1| sex-lethal [Drosophila simulans]
gi|87082648|gb|ABD18821.1| sex-lethal [Drosophila simulans]
gi|87082650|gb|ABD18822.1| sex-lethal [Drosophila simulans]
gi|87082652|gb|ABD18823.1| sex-lethal [Drosophila simulans]
gi|87082654|gb|ABD18824.1| sex-lethal [Drosophila simulans]
gi|87082656|gb|ABD18825.1| sex-lethal [Drosophila simulans]
gi|87082658|gb|ABD18826.1| sex-lethal [Drosophila simulans]
gi|87082660|gb|ABD18827.1| sex-lethal [Drosophila simulans]
gi|87082662|gb|ABD18828.1| sex-lethal [Drosophila simulans]
gi|87082664|gb|ABD18829.1| sex-lethal [Drosophila simulans]
gi|87082666|gb|ABD18830.1| sex-lethal [Drosophila simulans]
gi|87082668|gb|ABD18831.1| sex-lethal [Drosophila simulans]
gi|87082670|gb|ABD18832.1| sex-lethal [Drosophila simulans]
gi|87082672|gb|ABD18833.1| sex-lethal [Drosophila simulans]
gi|87082674|gb|ABD18834.1| sex-lethal [Drosophila simulans]
gi|87082676|gb|ABD18835.1| sex-lethal [Drosophila simulans]
gi|87082678|gb|ABD18836.1| sex-lethal [Drosophila simulans]
gi|87082680|gb|ABD18837.1| sex-lethal [Drosophila simulans]
gi|87082682|gb|ABD18838.1| sex-lethal [Drosophila simulans]
gi|87082684|gb|ABD18839.1| sex-lethal [Drosophila simulans]
gi|87082686|gb|ABD18840.1| sex-lethal [Drosophila simulans]
gi|87082688|gb|ABD18841.1| sex-lethal [Drosophila simulans]
gi|87082690|gb|ABD18842.1| sex-lethal [Drosophila simulans]
gi|87082692|gb|ABD18843.1| sex-lethal [Drosophila simulans]
gi|87082694|gb|ABD18844.1| sex-lethal [Drosophila simulans]
gi|87082696|gb|ABD18845.1| sex-lethal [Drosophila simulans]
gi|87082698|gb|ABD18846.1| sex-lethal [Drosophila simulans]
gi|87082700|gb|ABD18847.1| sex-lethal [Drosophila simulans]
gi|87082702|gb|ABD18848.1| sex-lethal [Drosophila simulans]
gi|87082704|gb|ABD18849.1| sex-lethal [Drosophila simulans]
gi|87082706|gb|ABD18850.1| sex-lethal [Drosophila simulans]
gi|87082708|gb|ABD18851.1| sex-lethal [Drosophila simulans]
gi|87082710|gb|ABD18852.1| sex-lethal [Drosophila simulans]
gi|87082712|gb|ABD18853.1| sex-lethal [Drosophila simulans]
gi|87082714|gb|ABD18854.1| sex-lethal [Drosophila simulans]
gi|87082716|gb|ABD18855.1| sex-lethal [Drosophila simulans]
gi|87082718|gb|ABD18856.1| sex-lethal [Drosophila simulans]
gi|87082720|gb|ABD18857.1| sex-lethal [Drosophila simulans]
gi|87082722|gb|ABD18858.1| sex-lethal [Drosophila simulans]
gi|87082724|gb|ABD18859.1| sex-lethal [Drosophila simulans]
gi|87082726|gb|ABD18860.1| sex-lethal [Drosophila simulans]
gi|87082728|gb|ABD18861.1| sex-lethal [Drosophila simulans]
gi|87082730|gb|ABD18862.1| sex-lethal [Drosophila simulans]
gi|87082732|gb|ABD18863.1| sex-lethal [Drosophila simulans]
gi|87082734|gb|ABD18864.1| sex-lethal [Drosophila simulans]
gi|87082736|gb|ABD18865.1| sex-lethal [Drosophila simulans]
gi|87082738|gb|ABD18866.1| sex-lethal [Drosophila simulans]
gi|87082740|gb|ABD18867.1| sex-lethal [Drosophila simulans]
gi|87082742|gb|ABD18868.1| sex-lethal [Drosophila simulans]
gi|87082744|gb|ABD18869.1| sex-lethal [Drosophila simulans]
gi|87082746|gb|ABD18870.1| sex-lethal [Drosophila simulans]
gi|87082748|gb|ABD18871.1| sex-lethal [Drosophila simulans]
gi|87082750|gb|ABD18872.1| sex-lethal [Drosophila simulans]
gi|87082752|gb|ABD18873.1| sex-lethal [Drosophila simulans]
gi|87082754|gb|ABD18874.1| sex-lethal [Drosophila simulans]
gi|87082756|gb|ABD18875.1| sex-lethal [Drosophila simulans]
gi|87082758|gb|ABD18876.1| sex-lethal [Drosophila simulans]
gi|87082760|gb|ABD18877.1| sex-lethal [Drosophila simulans]
gi|87082762|gb|ABD18878.1| sex-lethal [Drosophila simulans]
gi|87082764|gb|ABD18879.1| sex-lethal [Drosophila simulans]
gi|87082766|gb|ABD18880.1| sex-lethal [Drosophila simulans]
gi|87082768|gb|ABD18881.1| sex-lethal [Drosophila simulans]
gi|87082770|gb|ABD18882.1| sex-lethal [Drosophila simulans]
gi|87082772|gb|ABD18883.1| sex-lethal [Drosophila simulans]
gi|87082774|gb|ABD18884.1| sex-lethal [Drosophila simulans]
gi|87082776|gb|ABD18885.1| sex-lethal [Drosophila simulans]
gi|87082778|gb|ABD18886.1| sex-lethal [Drosophila simulans]
gi|87082780|gb|ABD18887.1| sex-lethal [Drosophila simulans]
gi|87082782|gb|ABD18888.1| sex-lethal [Drosophila simulans]
gi|87082784|gb|ABD18889.1| sex-lethal [Drosophila simulans]
gi|87082786|gb|ABD18890.1| sex-lethal [Drosophila simulans]
gi|87082788|gb|ABD18891.1| sex-lethal [Drosophila simulans]
Length = 61
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 6 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 58
>gi|417399025|gb|JAA46545.1| Putative rna-binding protein elav/hu rrm superfamily [Desmodus
rotundus]
Length = 328
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|355565007|gb|EHH21496.1| hypothetical protein EGK_04578 [Macaca mulatta]
Length = 476
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHQDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|311272711|ref|XP_003133555.1| PREDICTED: RNA-binding protein 45 [Sus scrofa]
Length = 474
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|301766904|ref|XP_002918872.1| PREDICTED: RNA-binding protein 45-like [Ailuropoda melanoleuca]
gi|281352312|gb|EFB27896.1| hypothetical protein PANDA_007405 [Ailuropoda melanoleuca]
Length = 474
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|242279034|ref|YP_002991163.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
gi|242121928|gb|ACS79624.1| RNP-1 like RNA-binding protein [Desulfovibrio salexigens DSM
2638]
Length = 87
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T+E++++ F + GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEEDVRASFEAYGEVVSVKLIEDRETG 41
>gi|42415867|gb|AAS15801.1| sex lethal [Drosophila melanogaster]
gi|42415869|gb|AAS15802.1| sex lethal [Drosophila melanogaster]
gi|42415871|gb|AAS15803.1| sex lethal [Drosophila melanogaster]
gi|42415873|gb|AAS15804.1| sex lethal [Drosophila melanogaster]
gi|42415875|gb|AAS15805.1| sex lethal [Drosophila melanogaster]
gi|42415877|gb|AAS15806.1| sex lethal [Drosophila melanogaster]
gi|42415879|gb|AAS15807.1| sex lethal [Drosophila melanogaster]
gi|42415881|gb|AAS15808.1| sex lethal [Drosophila melanogaster]
gi|42415883|gb|AAS15809.1| sex lethal [Drosophila melanogaster]
gi|42415885|gb|AAS15810.1| sex lethal [Drosophila melanogaster]
gi|42415887|gb|AAS15811.1| sex lethal [Drosophila melanogaster]
gi|42415889|gb|AAS15812.1| sex lethal [Drosophila melanogaster]
gi|42415891|gb|AAS15813.1| sex lethal [Drosophila melanogaster]
gi|42415893|gb|AAS15814.1| sex lethal [Drosophila melanogaster]
gi|42415895|gb|AAS15815.1| sex lethal [Drosophila melanogaster]
gi|42415897|gb|AAS15816.1| sex lethal [Drosophila melanogaster]
gi|42415899|gb|AAS15817.1| sex lethal [Drosophila melanogaster]
gi|42415901|gb|AAS15818.1| sex lethal [Drosophila melanogaster]
gi|42415903|gb|AAS15819.1| sex lethal [Drosophila melanogaster]
gi|42415905|gb|AAS15820.1| sex lethal [Drosophila melanogaster]
gi|42415907|gb|AAS15821.1| sex lethal [Drosophila melanogaster]
gi|42415909|gb|AAS15822.1| sex lethal [Drosophila melanogaster]
gi|42415911|gb|AAS15823.1| sex lethal [Drosophila melanogaster]
gi|42415913|gb|AAS15824.1| sex lethal [Drosophila melanogaster]
gi|42415915|gb|AAS15825.1| sex lethal [Drosophila melanogaster]
gi|42415917|gb|AAS15826.1| sex lethal [Drosophila melanogaster]
gi|42415919|gb|AAS15827.1| sex lethal [Drosophila melanogaster]
gi|42415921|gb|AAS15828.1| sex lethal [Drosophila melanogaster]
gi|42415923|gb|AAS15829.1| sex lethal [Drosophila melanogaster]
gi|42415925|gb|AAS15830.1| sex lethal [Drosophila melanogaster]
gi|42415927|gb|AAS15831.1| sex lethal [Drosophila melanogaster]
gi|42415929|gb|AAS15832.1| sex lethal [Drosophila melanogaster]
gi|42415931|gb|AAS15833.1| sex lethal [Drosophila melanogaster]
gi|42415933|gb|AAS15834.1| sex lethal [Drosophila melanogaster]
gi|42415935|gb|AAS15835.1| sex lethal [Drosophila melanogaster]
gi|42415937|gb|AAS15836.1| sex lethal [Drosophila melanogaster]
gi|42415939|gb|AAS15837.1| sex lethal [Drosophila melanogaster]
gi|42415941|gb|AAS15838.1| sex lethal [Drosophila melanogaster]
gi|42415943|gb|AAS15839.1| sex lethal [Drosophila melanogaster]
gi|42415945|gb|AAS15840.1| sex lethal [Drosophila melanogaster]
gi|42415947|gb|AAS15841.1| sex lethal [Drosophila melanogaster]
gi|42415949|gb|AAS15842.1| sex lethal [Drosophila melanogaster]
gi|42415951|gb|AAS15843.1| sex lethal [Drosophila melanogaster]
gi|42415953|gb|AAS15844.1| sex lethal [Drosophila melanogaster]
gi|42415955|gb|AAS15845.1| sex lethal [Drosophila melanogaster]
gi|42415957|gb|AAS15846.1| sex lethal [Drosophila melanogaster]
gi|42415959|gb|AAS15847.1| sex lethal [Drosophila melanogaster]
gi|42415961|gb|AAS15848.1| sex lethal [Drosophila melanogaster]
gi|42415963|gb|AAS15849.1| sex lethal [Drosophila melanogaster]
gi|42415965|gb|AAS15850.1| sex lethal [Drosophila melanogaster]
gi|42415967|gb|AAS15851.1| sex lethal [Drosophila melanogaster]
gi|42415969|gb|AAS15852.1| sex lethal [Drosophila melanogaster]
gi|42415971|gb|AAS15853.1| sex lethal [Drosophila melanogaster]
gi|42415973|gb|AAS15854.1| sex lethal [Drosophila melanogaster]
gi|42415975|gb|AAS15855.1| sex lethal [Drosophila melanogaster]
gi|42415977|gb|AAS15856.1| sex lethal [Drosophila melanogaster]
gi|42415979|gb|AAS15857.1| sex lethal [Drosophila melanogaster]
gi|42415981|gb|AAS15858.1| sex lethal [Drosophila melanogaster]
gi|42415983|gb|AAS15859.1| sex lethal [Drosophila melanogaster]
gi|42415985|gb|AAS15860.1| sex lethal [Drosophila melanogaster]
gi|42415987|gb|AAS15861.1| sex lethal [Drosophila melanogaster]
gi|42415989|gb|AAS15862.1| sex lethal [Drosophila melanogaster]
gi|42415991|gb|AAS15863.1| sex lethal [Drosophila melanogaster]
gi|42415993|gb|AAS15864.1| sex lethal [Drosophila melanogaster]
gi|42415995|gb|AAS15865.1| sex lethal [Drosophila melanogaster]
gi|42415997|gb|AAS15866.1| sex lethal [Drosophila melanogaster]
gi|42415999|gb|AAS15867.1| sex lethal [Drosophila melanogaster]
gi|42416001|gb|AAS15868.1| sex lethal [Drosophila melanogaster]
gi|42416003|gb|AAS15869.1| sex lethal [Drosophila melanogaster]
gi|42416005|gb|AAS15870.1| sex lethal [Drosophila melanogaster]
gi|42416007|gb|AAS15871.1| sex lethal [Drosophila melanogaster]
gi|42416009|gb|AAS15872.1| sex lethal [Drosophila melanogaster]
gi|42416011|gb|AAS15873.1| sex lethal [Drosophila melanogaster]
gi|42416013|gb|AAS15874.1| sex lethal [Drosophila melanogaster]
gi|42416015|gb|AAS15875.1| sex lethal [Drosophila melanogaster]
gi|42416017|gb|AAS15876.1| sex lethal [Drosophila melanogaster]
gi|42416019|gb|AAS15877.1| sex lethal [Drosophila melanogaster]
gi|42416021|gb|AAS15878.1| sex lethal [Drosophila melanogaster]
gi|42416023|gb|AAS15879.1| sex lethal [Drosophila melanogaster]
gi|42416025|gb|AAS15880.1| sex lethal [Drosophila melanogaster]
gi|42416027|gb|AAS15881.1| sex lethal [Drosophila melanogaster]
gi|42416029|gb|AAS15882.1| sex lethal [Drosophila melanogaster]
gi|42416031|gb|AAS15883.1| sex lethal [Drosophila melanogaster]
gi|42416033|gb|AAS15884.1| sex lethal [Drosophila melanogaster]
gi|42416035|gb|AAS15885.1| sex lethal [Drosophila melanogaster]
gi|42416037|gb|AAS15886.1| sex lethal [Drosophila melanogaster]
gi|42416039|gb|AAS15887.1| sex lethal [Drosophila melanogaster]
gi|42416041|gb|AAS15888.1| sex lethal [Drosophila melanogaster]
gi|42416043|gb|AAS15889.1| sex lethal [Drosophila melanogaster]
gi|42416045|gb|AAS15890.1| sex lethal [Drosophila melanogaster]
gi|42416047|gb|AAS15891.1| sex lethal [Drosophila melanogaster]
gi|42416049|gb|AAS15892.1| sex lethal [Drosophila melanogaster]
gi|42416051|gb|AAS15893.1| sex lethal [Drosophila melanogaster]
gi|42416053|gb|AAS15894.1| sex lethal [Drosophila melanogaster]
gi|42416055|gb|AAS15895.1| sex lethal [Drosophila melanogaster]
gi|42416057|gb|AAS15896.1| sex lethal [Drosophila melanogaster]
gi|42416059|gb|AAS15897.1| sex lethal [Drosophila melanogaster]
gi|42416061|gb|AAS15898.1| sex lethal [Drosophila melanogaster]
gi|42416063|gb|AAS15899.1| sex lethal [Drosophila melanogaster]
gi|42416065|gb|AAS15900.1| sex lethal [Drosophila melanogaster]
gi|42416067|gb|AAS15901.1| sex lethal [Drosophila melanogaster]
gi|42416069|gb|AAS15902.1| sex lethal [Drosophila melanogaster]
gi|42416071|gb|AAS15903.1| sex lethal [Drosophila melanogaster]
gi|42416073|gb|AAS15904.1| sex lethal [Drosophila melanogaster]
gi|42416075|gb|AAS15905.1| sex lethal [Drosophila melanogaster]
gi|42416077|gb|AAS15906.1| sex lethal [Drosophila melanogaster]
gi|42416079|gb|AAS15907.1| sex lethal [Drosophila melanogaster]
gi|42416081|gb|AAS15908.1| sex lethal [Drosophila melanogaster]
gi|42416083|gb|AAS15909.1| sex lethal [Drosophila melanogaster]
gi|42416085|gb|AAS15910.1| sex lethal [Drosophila melanogaster]
gi|42416087|gb|AAS15911.1| sex lethal [Drosophila melanogaster]
gi|42416089|gb|AAS15912.1| sex lethal [Drosophila melanogaster]
gi|42416091|gb|AAS15913.1| sex lethal [Drosophila melanogaster]
gi|42416093|gb|AAS15914.1| sex lethal [Drosophila melanogaster]
gi|42416095|gb|AAS15915.1| sex lethal [Drosophila melanogaster]
gi|42416097|gb|AAS15916.1| sex lethal [Drosophila melanogaster]
gi|42416099|gb|AAS15917.1| sex lethal [Drosophila melanogaster]
gi|42416101|gb|AAS15918.1| sex lethal [Drosophila melanogaster]
gi|42416103|gb|AAS15919.1| sex lethal [Drosophila melanogaster]
gi|42416105|gb|AAS15920.1| sex lethal [Drosophila melanogaster]
gi|42416107|gb|AAS15921.1| sex lethal [Drosophila melanogaster]
gi|42416109|gb|AAS15922.1| sex lethal [Drosophila melanogaster]
gi|42416111|gb|AAS15923.1| sex lethal [Drosophila melanogaster]
gi|42416113|gb|AAS15924.1| sex lethal [Drosophila melanogaster]
gi|42416115|gb|AAS15925.1| sex lethal [Drosophila melanogaster]
gi|42416117|gb|AAS15926.1| sex lethal [Drosophila melanogaster]
gi|42416119|gb|AAS15927.1| sex lethal [Drosophila melanogaster]
gi|42416121|gb|AAS15928.1| sex lethal [Drosophila melanogaster]
gi|42416123|gb|AAS15929.1| sex lethal [Drosophila melanogaster]
gi|42416125|gb|AAS15930.1| sex lethal [Drosophila melanogaster]
gi|42416127|gb|AAS15931.1| sex lethal [Drosophila melanogaster]
gi|42416129|gb|AAS15932.1| sex lethal [Drosophila melanogaster]
gi|42416131|gb|AAS15933.1| sex lethal [Drosophila melanogaster]
gi|42416133|gb|AAS15934.1| sex lethal [Drosophila melanogaster]
gi|42416135|gb|AAS15935.1| sex lethal [Drosophila melanogaster]
gi|42416137|gb|AAS15936.1| sex lethal [Drosophila melanogaster]
gi|42416139|gb|AAS15937.1| sex lethal [Drosophila melanogaster]
gi|42416141|gb|AAS15938.1| sex lethal [Drosophila melanogaster]
gi|42416143|gb|AAS15939.1| sex lethal [Drosophila melanogaster]
gi|42416145|gb|AAS15940.1| sex lethal [Drosophila melanogaster]
gi|42416147|gb|AAS15941.1| sex lethal [Drosophila melanogaster]
gi|42416149|gb|AAS15942.1| sex lethal [Drosophila melanogaster]
gi|42416151|gb|AAS15943.1| sex lethal [Drosophila melanogaster]
gi|42416153|gb|AAS15944.1| sex lethal [Drosophila melanogaster]
gi|42416155|gb|AAS15945.1| sex lethal [Drosophila melanogaster]
gi|42416157|gb|AAS15946.1| sex lethal [Drosophila melanogaster]
gi|42416159|gb|AAS15947.1| sex lethal [Drosophila melanogaster]
gi|42416161|gb|AAS15948.1| sex lethal [Drosophila melanogaster]
gi|42416163|gb|AAS15949.1| sex lethal [Drosophila melanogaster]
gi|42416165|gb|AAS15950.1| sex lethal [Drosophila melanogaster]
gi|42416167|gb|AAS15951.1| sex lethal [Drosophila melanogaster]
gi|42416169|gb|AAS15952.1| sex lethal [Drosophila melanogaster]
gi|42416171|gb|AAS15953.1| sex lethal [Drosophila melanogaster]
gi|42416173|gb|AAS15954.1| sex lethal [Drosophila simulans]
Length = 59
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 6 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 58
>gi|440901905|gb|ELR52766.1| RNA-binding protein 45, partial [Bos grunniens mutus]
Length = 509
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 141 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVFGDIEYCSIIKNKVTGE 194
>gi|355715813|gb|AES05410.1| RNA binding motif protein 45 [Mustela putorius furo]
Length = 455
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 88 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 141
>gi|303248437|ref|ZP_07334696.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302490148|gb|EFL50067.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 96
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPE 84
L V LP + ++E+++LF++ G+VES LI D+ TG L +PE
Sbjct: 5 LYVGNLPFSTNEDEIRNLFAAYGDVESVNLIVDRETGRLRGFGFVEMSPE 54
>gi|301612447|ref|XP_002935726.1| PREDICTED: RNA-binding protein 45 isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 459
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S S +E T + V +P++ T+E++K F G++E C +I++K TGE
Sbjct: 99 SRGSTSHRDVEDEELTRIFV-MIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGE 152
>gi|193586991|ref|XP_001951686.1| PREDICTED: RNA-binding protein 28-like [Acyrthosiphon pisum]
Length = 625
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
+ N AS+ P+N + LI+ LP T +E++K FS GE+ KL+R K G+L
Sbjct: 8 AKNKASKCPNNRRGR--LIIRNLPFTTDEEQLKEHFSKFGEINDIKLLR-KPDGKL 60
>gi|301612449|ref|XP_002935727.1| PREDICTED: RNA-binding protein 45 isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 475
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S S S +E T + V +P++ T+E++K F G++E C +I++K TGE
Sbjct: 99 SRGSTSHRDVEDEELTRIFV-MIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGE 152
>gi|23510273|ref|NP_700454.1| RNA-binding protein 45 [Mus musculus]
gi|59797944|sp|Q8BHN5.1|RBM45_MOUSE RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
Short=RB-1; AltName: Full=RNA-binding motif protein 45
gi|22831324|dbj|BAC16208.1| developmentally regulated RNA-binding protein 1 [Mus musculus]
gi|24209917|gb|AAN41644.1| putative RNA binding protein RB-1 [Mus musculus]
gi|34784330|gb|AAH57890.1| Rbm45 protein [Mus musculus]
gi|148695258|gb|EDL27205.1| mCG68005 [Mus musculus]
Length = 476
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|74183839|dbj|BAE24499.1| unnamed protein product [Mus musculus]
Length = 426
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|354477712|ref|XP_003501063.1| PREDICTED: RNA-binding protein 45-like [Cricetulus griseus]
gi|344252496|gb|EGW08600.1| RNA-binding protein 45 [Cricetulus griseus]
Length = 477
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|426337850|ref|XP_004032907.1| PREDICTED: RNA-binding protein 45 [Gorilla gorilla gorilla]
Length = 474
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKITGE 159
>gi|449681386|ref|XP_002157256.2| PREDICTED: RNA-binding protein 34-like [Hydra magnipapillata]
Length = 360
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ K L V LP +++ EE++S F G +E ++IRDK TG
Sbjct: 201 DQKLCLFVGNLPFSLSDEELRSHFKDCGWIEDIRIIRDKATG 242
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
TNL V LP + T+ +++ F+ GEV S K+I D+ TG
Sbjct: 2 TNLYVGNLPWSTTEAQLRDSFAEFGEVSSAKIIEDRETG 40
>gi|146093105|ref|XP_001466664.1| putative RNA binding protein [Leishmania infantum JPCM5]
gi|134071027|emb|CAM69707.1| putative RNA binding protein [Leishmania infantum JPCM5]
Length = 920
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E S TNLI+ + MT+ + +LF GEV SC ++RD TG
Sbjct: 215 EHSSTNLILYNIGPHMTEAALHTLFDPFGEVVSCAVMRDIHTG 257
>gi|152995564|ref|YP_001340399.1| RNP-1 like RNA-binding protein [Marinomonas sp. MWYL1]
gi|150836488|gb|ABR70464.1| RNP-1 like RNA-binding protein [Marinomonas sp. MWYL1]
Length = 104
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+E L+V L + T++E++SLF+ G ++SC L+ DK TGE
Sbjct: 12 KEKNMKLLVRNLARNTTEDELRSLFAVHGTLQSCTLVMDKETGE 55
>gi|336450816|ref|ZP_08621262.1| RRM domain-containing RNA-binding protein [Idiomarina sp. A28L]
gi|336282072|gb|EGN75310.1| RRM domain-containing RNA-binding protein [Idiomarina sp. A28L]
Length = 163
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 22 ASQTPSNEESK----TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
AS+ P+ SK L V LP +++EE+++LF GEV +L++D+ TG
Sbjct: 66 ASRPPAKRTSKGTDGRTLYVGNLPFKISEEEVENLFGRYGEVTDVRLVKDRRTGR 120
>gi|398018801|ref|XP_003862565.1| RNA binding protein, putative [Leishmania donovani]
gi|322500795|emb|CBZ35872.1| RNA binding protein, putative [Leishmania donovani]
Length = 920
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E S TNLI+ + MT+ + +LF GEV SC ++RD TG
Sbjct: 215 EHSSTNLILYNIGPHMTEAALHTLFDPFGEVVSCAVMRDIHTG 257
>gi|119631449|gb|EAX11044.1| developmentally regulated RNA-binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 617
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 249 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 302
>gi|261326987|emb|CBH09962.1| RNA-binding protein RBP6, putative [Trypanosoma brucei gambiense
DAL972]
Length = 241
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
++ + LIVNYL +T ++ LFS GE++ ++I DK T
Sbjct: 136 DDRYRKQLIVNYLAPDVTSTDLHELFSRFGELDGARIIYDKQT 178
>gi|237844787|ref|XP_002371691.1| CELF family protein, putative [Toxoplasma gondii ME49]
gi|211969355|gb|EEB04551.1| CELF family protein, putative [Toxoplasma gondii ME49]
Length = 475
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 3 AMPQQNGSLHNSSVNSHNSASQTPSNEES---KTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
A+PQ + ++V + S P+ + + L V +PQ+M ++ +F GEV
Sbjct: 4 AIPQAGEMENGATVGAPVSGVPRPAGHMAPRVEIKLFVGRVPQSMEDAALRPIFEEFGEV 63
Query: 60 ESCKLIRDKTTGE 72
+ +IRDK TG+
Sbjct: 64 KEAVIIRDKATGK 76
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD--KTTGELSVVANSIFAP 83
P +++K L + +P+TMT++E++ FS+ G VE +++D + TG+ F
Sbjct: 132 PGQDQAK--LFIGSIPRTMTEDEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKE 189
Query: 84 ELNGLHSQTERSRKSMF 100
E LH+ S K F
Sbjct: 190 EA--LHAVRTLSGKHTF 204
>gi|72386923|ref|XP_843886.1| RNA-binding protein RBP6 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359014|gb|AAX79463.1| RNA-binding protein RBP6, putative [Trypanosoma brucei]
gi|70800418|gb|AAZ10327.1| RNA-binding protein RBP6, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 239
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
++ + LIVNYL +T ++ LFS GE++ ++I DK T
Sbjct: 134 DDRYRKQLIVNYLAPDVTSTDLHELFSRFGELDGARIIYDKQT 176
>gi|452851769|ref|YP_007493453.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
gi|451895423|emb|CCH48302.1| putative RNA-binding protein rbpE [Desulfovibrio piezophilus]
Length = 87
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T+E++++ F + GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSSTEEDVRATFEAYGEVYSVKLINDRETG 41
>gi|402574395|ref|YP_006623738.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
gi|402255592|gb|AFQ45867.1| RRM domain-containing RNA-binding protein [Desulfosporosinus
meridiei DSM 13257]
Length = 83
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG--------ELSVVANSIFAPE 84
T L V LP T EE+ FS G+VES ++I D+ TG E+ + + A E
Sbjct: 3 TTLYVGNLPWNTTAEELGQFFSEYGQVESSRIITDRETGRSRGFGFIEVEDMDAARMAEE 62
Query: 85 LNG 87
LNG
Sbjct: 63 LNG 65
>gi|90085597|dbj|BAE91539.1| unnamed protein product [Macaca fascicularis]
Length = 295
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|95007487|emb|CAJ20709.1| RNA binding protein, putative [Toxoplasma gondii RH]
gi|221480877|gb|EEE19298.1| conserved hypothetical protein [Toxoplasma gondii GT1]
gi|221501598|gb|EEE27368.1| RNA recognition motif domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 475
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 3 AMPQQNGSLHNSSVNSHNSASQTPSNEES---KTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
A+PQ + ++V + S P+ + + L V +PQ+M ++ +F GEV
Sbjct: 4 AIPQAGEMENGATVGAPVSGVPRPAGHMAPRVEIKLFVGRVPQSMEDAALRPIFEEFGEV 63
Query: 60 ESCKLIRDKTTGE 72
+ +IRDK TG+
Sbjct: 64 KEAVIIRDKATGK 76
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD--KTTGELSVVANSIFAP 83
P +++K L + +P+TMT+EE++ FS+ G VE +++D + TG+ F
Sbjct: 132 PGQDQAK--LFIGSIPRTMTEEEVRQFFSTYGTVEEVFVMKDNVQNTGKGCCFVKFAFKE 189
Query: 84 ELNGLHSQTERSRKSMF 100
E LH+ S K F
Sbjct: 190 EA--LHAVRTLSGKHTF 204
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The
Second Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 6 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 58
>gi|37522494|ref|NP_925871.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
gi|35213495|dbj|BAC90866.1| RNA-binding protein [Gloeobacter violaceus PCC 7421]
Length = 195
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L V LP+ +T++E++++F+ GEV S K+I D+ TG+
Sbjct: 4 RLYVGNLPEEVTRQELEAIFAPAGEVVSLKVITDRKTGK 42
>gi|23463293|ref|NP_695218.1| RNA-binding protein 45 [Rattus norvegicus]
gi|59797634|sp|Q8CFD1.1|RBM45_RAT RecName: Full=RNA-binding protein 45; AltName:
Full=Developmentally-regulated RNA-binding protein 1;
AltName: Full=RNA-binding motif protein 45
gi|22831320|dbj|BAC16206.1| developmentally regulated RNA-binding protein 1 [Rattus norvegicus]
Length = 476
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGE 159
>gi|149022330|gb|EDL79224.1| developmentally regulated RNA-binding protein 1 [Rattus norvegicus]
Length = 476
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGE 159
>gi|2204091|emb|CAB05389.1| FCA delta [Arabidopsis thaliana]
Length = 533
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 94 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 153
Query: 67 DKTTGE 72
DK TG+
Sbjct: 154 DKRTGQ 159
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
P ES T + N LP + EE+ + F+ G+V S +LIRDK TG
Sbjct: 331 PQASESHTVFVGN-LPHEVQDEELWTFFADCGDVTSVRLIRDKGTG 375
>gi|401397143|ref|XP_003879991.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
gi|325114399|emb|CBZ49956.1| hypothetical protein NCLIV_004400 [Neospora caninum Liverpool]
Length = 475
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 MDAMPQQNGSLHN-SSVNSHNSASQTPSNEES---KTNLIVNYLPQTMTQEEMKSLFSSV 56
M+ Q G + N ++V + S P+ + + L V +PQ+M ++ +F
Sbjct: 1 MEGGVAQTGEMENGAAVGAPLGGSSRPTGHMAPHVEIKLFVGRVPQSMEDAALRPIFEEF 60
Query: 57 GEVESCKLIRDKTTGE 72
GEV+ +IRDK TG+
Sbjct: 61 GEVKEAVIIRDKATGK 76
>gi|239908108|ref|YP_002954849.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|239797974|dbj|BAH76963.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
Length = 97
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V LP + ++E++ LF++ G+V S KLI D+ TG L
Sbjct: 5 LYVGNLPFSTNEDEIRDLFAAYGDVSSVKLIVDRETGRL 43
>gi|186511881|ref|NP_193363.4| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658326|gb|AEE83726.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 533
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 94 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 153
Query: 67 DKTTGE 72
DK TG+
Sbjct: 154 DKRTGQ 159
>gi|146083786|ref|XP_001464835.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
gi|134068930|emb|CAM67071.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
Length = 348
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 15 SVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S + + S+S TPS+ TNL V YLP+ + ++ +FS+ G++ S ++RD +G+
Sbjct: 5 SQHQYKSSSFTPSS----TNLFVRYLPREVDDNRLREIFSAFGKITSSMVMRDIYSGQ 58
>gi|2204096|emb|CAB05392.1| FCA delta [Arabidopsis thaliana]
gi|5302786|emb|CAB46035.1| FCA delta protein [Arabidopsis thaliana]
gi|7268378|emb|CAB78671.1| FCA delta protein [Arabidopsis thaliana]
Length = 533
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 94 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 153
Query: 67 DKTTGE 72
DK TG+
Sbjct: 154 DKRTGQ 159
>gi|303246975|ref|ZP_07333251.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302491682|gb|EFL51565.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 92
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V LP T+E ++ LF+ GEV+S KLI D+ TG+
Sbjct: 4 NIYVGNLPFRTTEESVRDLFAQYGEVQSVKLISDRETGK 42
>gi|357155243|ref|XP_003577055.1| PREDICTED: flowering time control protein FCA-like [Brachypodium
distachyon]
Length = 749
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF+ G+V LIRD+ TGE
Sbjct: 122 NKSGYVKLFVGSVPRTANEDDVRPLFADHGDVLEVALIRDRKTGE 166
>gi|406954527|gb|EKD83359.1| RNP-1 like protein RNA-binding protein, partial [uncultured
bacterium]
Length = 95
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T+E++K++F GEV + +I+D+ TG
Sbjct: 2 NIYVGNLPYSATEEQLKTMFGVYGEVTTASIIKDRDTG 39
>gi|426223062|ref|XP_004005698.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ovis aries]
Length = 607
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|407850128|gb|EKG04639.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ +S+TNL ++ +P M Q E+++LF+ G++ S ++R+ TG+
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGK 154
>gi|400621719|gb|AFP87475.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu
antigen D), partial [Mus musculus]
Length = 55
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEM 49
++SKTNLIVNYLPQ MTQEE
Sbjct: 35 DDSKTNLIVNYLPQNMTQEEF 55
>gi|401415852|ref|XP_003872421.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488645|emb|CBZ23892.1| putative RNA binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 923
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 21 SASQTP--SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S++ TP E S TNLI+ + MT+ + +LF GEV SC ++RD TG
Sbjct: 207 SSAPTPVTPTEHSSTNLILYNIGPHMTEVALHTLFDPFGEVVSCAVMRDIHTG 259
>gi|336088638|ref|NP_001229511.1| cleavage stimulation factor subunit 2 tau variant [Bos taurus]
gi|296472872|tpg|DAA14987.1| TPA: CSTF2 protein-like [Bos taurus]
Length = 642
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|71652518|ref|XP_814914.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70879928|gb|EAN93063.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 477
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 32/46 (69%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ +S+TNL ++ +P M Q E+++LF+ G++ S ++R+ TG+
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTGK 154
>gi|436842523|ref|YP_007326901.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171429|emb|CCO24802.1| putative RNA-binding protein rbpE [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 88
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + ++E++K LF GEV S KLI D+ TG
Sbjct: 4 NIYVGNLPWSASEEDVKVLFEEFGEVISVKLITDRETG 41
>gi|426252723|ref|XP_004020052.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 1 [Ovis aries]
Length = 572
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|88682979|gb|AAI05553.1| CSTF2 protein [Bos taurus]
Length = 632
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|50510589|dbj|BAD32280.1| mKIAA0689 protein [Mus musculus]
Length = 643
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 16 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 66
>gi|186511879|ref|NP_849543.2| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
gi|332658325|gb|AEE83725.1| RNA binding / abscisic acid binding protein [Arabidopsis thaliana]
Length = 747
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 94 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 153
Query: 67 DKTTGE 72
DK TG+
Sbjct: 154 DKRTGQ 159
>gi|209696282|ref|YP_002264213.1| RNA binding protein [Aliivibrio salmonicida LFI1238]
gi|208010236|emb|CAQ80567.1| putative RNA binding protein [Aliivibrio salmonicida LFI1238]
Length = 161
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++ S +++++ T L V LP + ++K LFS G+V + +L++DK TG+
Sbjct: 59 DTISSADTSDQASTTLYVGNLPYRANESDVKDLFSEFGDVFAVRLMKDKRTGK 111
>gi|148709763|gb|EDL41709.1| cleavage stimulation factor, 3' pre-RNA subunit 2, tau [Mus
musculus]
Length = 644
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 17 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 67
>gi|426252727|ref|XP_004020054.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 3 [Ovis aries]
Length = 623
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|410043862|ref|XP_003951699.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant [Pan
troglodytes]
Length = 576
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|2204089|emb|CAB05388.1| FCA gamma [Arabidopsis thaliana]
gi|57169178|gb|AAW38964.1| FCA [Arabidopsis thaliana]
Length = 747
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+D
Sbjct: 95 GQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKD 154
Query: 68 KTTGE 72
K TG+
Sbjct: 155 KRTGQ 159
>gi|2204095|emb|CAB05391.1| FCA gamma [Arabidopsis thaliana]
Length = 747
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+D
Sbjct: 95 GQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKD 154
Query: 68 KTTGE 72
K TG+
Sbjct: 155 KRTGQ 159
>gi|334302803|sp|O04425.2|FCA_ARATH RecName: Full=Flowering time control protein FCA
gi|2244986|emb|CAB10407.1| FCA gamma protein [Arabidopsis thaliana]
gi|7268377|emb|CAB78670.1| FCA gamma protein [Arabidopsis thaliana]
Length = 747
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 9 GSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+D
Sbjct: 95 GQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKD 154
Query: 68 KTTGE 72
K TG+
Sbjct: 155 KRTGQ 159
>gi|71419592|ref|XP_811217.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875855|gb|EAN89366.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 185
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 27 SNEESKTNLIVNYLPQ------TMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSI 80
S + ++ V LP+ T T EE+ F+ G++ +C ++RD+ TGEL A
Sbjct: 99 SKDSDGRSIFVGNLPRGENGGPTTTPEELAQFFADCGQILNCTVLRDRGTGELKGTAYVE 158
Query: 81 FA 82
FA
Sbjct: 159 FA 160
>gi|148277061|ref|NP_112539.2| cleavage stimulation factor subunit 2 tau variant [Mus musculus]
gi|71153235|sp|Q8C7E9.2|CSTFT_MOUSE RecName: Full=Cleavage stimulation factor subunit 2 tau variant;
AltName: Full=CF-1 64 kDa subunit tau variant; AltName:
Full=Cleavage stimulation factor 64 kDa subunit tau
variant; Short=CSTF 64 kDa subunit tau variant;
AltName: Full=TauCstF-64
gi|26330250|dbj|BAC28855.1| unnamed protein product [Mus musculus]
gi|26350087|dbj|BAC38683.1| unnamed protein product [Mus musculus]
Length = 632
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|26341156|dbj|BAC34240.1| unnamed protein product [Mus musculus]
Length = 632
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|381160580|ref|ZP_09869812.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp.
970]
gi|380878644|gb|EIC20736.1| RRM domain-containing RNA-binding protein [Thiorhodovibrio sp.
970]
Length = 94
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +TQ+E++ F++ G+VES LI DK TG+
Sbjct: 2 NIYVGNLAYGVTQDELRDTFAAYGQVESANLITDKFTGD 40
>gi|340368182|ref|XP_003382631.1| PREDICTED: RNA-binding protein 45-like [Amphimedon queenslandica]
Length = 541
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 17 NSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+S N+A + N+ES + P+ +++++K+ F G+ + C +IRDK TGE
Sbjct: 146 SSKNTAIKADYNDESARTRLFVVCPKEYSEQDLKAKFEHFGDFDFCNIIRDKHTGE 201
>gi|345328005|ref|XP_001515360.2| PREDICTED: RNA-binding protein 45-like [Ornithorhynchus anatinus]
Length = 514
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P+ T+E+++ F G++E C +I++K TGE
Sbjct: 144 SRSSGSHRDVEDEELTRIFV-MIPKAYTEEDLRDKFKVYGDIEYCSIIKNKNTGE 197
>gi|221126097|ref|XP_002166019.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Hydra magnipapillata]
Length = 218
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 10/99 (10%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEESKTN----------LIVNYLPQTMTQEEMKSLFS 54
P GS+ + H+ A S K N ++V +L T + +K +F
Sbjct: 30 PLMAGSIDGTDTVPHDKAVIRASKSVYKPNKKVTGDPRKTIMVRHLSLTTNESTIKQIFQ 89
Query: 55 SVGEVESCKLIRDKTTGELSVVANSIFAPELNGLHSQTE 93
GE+ C+L+RD TG A ++ E + H+ E
Sbjct: 90 RFGEIRKCRLVRDIITGNSRCYAFIEYSHERDARHASRE 128
>gi|188528716|ref|NP_001120874.1| RNA-binding protein 45 [Danio rerio]
Length = 467
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P+T T++++K F G++E +IR+KTTG+
Sbjct: 96 SRSSGSHRDVEDEELTRIFV-MIPKTFTEDDLKETFKVYGDIEYAIIIRNKTTGD 149
>gi|74025412|ref|XP_829272.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834658|gb|EAN80160.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261335241|emb|CBH18235.1| RNA-binding protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 130
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N S+ P N+ + LP T+EE+++LF+ G++ S L+RDK T
Sbjct: 3 NQFSKMPLEPPYIRNVYIASLPPNYTEEELRALFAPFGKIVSTALVRDKET 53
>gi|20072518|gb|AAH26995.1| Cstf2t protein [Mus musculus]
Length = 637
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|421092926|ref|ZP_15553654.1| hypothetical protein LEP1GSC128_2009 [Leptospira borgpetersenii
str. 200801926]
gi|410364302|gb|EKP15327.1| hypothetical protein LEP1GSC128_2009 [Leptospira borgpetersenii
str. 200801926]
gi|456890197|gb|EMG01047.1| hypothetical protein LEP1GSC123_3660 [Leptospira borgpetersenii
str. 200701203]
Length = 129
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 29 EESKTNLI-VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
EE K I V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 4 EEGKIMKISVGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 47
>gi|376297960|ref|YP_005169190.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323460522|gb|EGB16387.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
Length = 87
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T+E++++ F + GEV S KL+ D+ TG
Sbjct: 4 NIYVGNLPWSATEEDVRAAFETFGEVISVKLVNDRETG 41
>gi|426252729|ref|XP_004020055.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 4 [Ovis aries]
Length = 646
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|356542092|ref|XP_003539505.1| PREDICTED: uncharacterized protein LOC100800982 isoform 1 [Glycine
max]
gi|356542094|ref|XP_003539506.1| PREDICTED: uncharacterized protein LOC100800982 isoform 2 [Glycine
max]
Length = 780
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG-----------ELSVVA 77
E TNL + YLP T+ + + LF GE+ K+I+D+ +G ++++
Sbjct: 461 EIDDTNLYIGYLPPTLDDDGLIQLFQQFGEIVMAKVIKDRMSGLSKGYGFVKYADITMAN 520
Query: 78 NSIFAPELNGLH 89
N+I A +NG
Sbjct: 521 NAILA--MNGYR 530
>gi|90421364|gb|ABD93920.1| RNA-binding protein HUD splice variant [Mus musculus]
Length = 69
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEM 49
++SKTNLIVNYLPQ MTQEE
Sbjct: 49 DDSKTNLIVNYLPQNMTQEEF 69
>gi|426252725|ref|XP_004020053.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
isoform 2 [Ovis aries]
Length = 612
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|301788792|ref|XP_002929813.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Ailuropoda melanoleuca]
Length = 552
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A + P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 5 AVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|317485939|ref|ZP_07944796.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|316922807|gb|EFV44036.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
Length = 90
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LP + T+++++ LF+ GEV S KL+ D+ TG
Sbjct: 5 LYVGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETG 41
>gi|260549134|ref|ZP_05823355.1| RNA-binding protein [Acinetobacter sp. RUH2624]
gi|260407862|gb|EEX01334.1| RNA-binding protein [Acinetobacter sp. RUH2624]
Length = 87
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+N+ K ++V L +++T+ E+ LF + G+VESC ++ DK TG+
Sbjct: 3 ANQGWKMKILVRNLDRSVTEAEVLELFKAYGKVESCVVVTDKDTGK 48
>gi|348550983|ref|XP_003461310.1| PREDICTED: ELAV-like protein 3-like [Cavia porcellus]
Length = 379
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP++M+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 145 NLYVSGLPKSMSQKEMEQLFSQYGRIITSRILVDQVTG 182
>gi|326934269|ref|XP_003213214.1| PREDICTED: ELAV-like protein 1-like [Meleagris gallopavo]
Length = 298
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++MTQ++++ +FS G + + +++ D+TTG
Sbjct: 70 PSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTG 116
>gi|126326367|ref|XP_001368766.1| PREDICTED: RNA-binding protein 45 [Monodelphis domestica]
Length = 474
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 ARSSGSHRDVEDEELTRIFV-MIPKSYTEEDLRDKFKVYGDIEYCSIIKNKATGE 159
>gi|410465997|ref|ZP_11319150.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409980981|gb|EKO37622.1| RRM domain-containing RNA-binding protein [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 97
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V LP + ++E++ LF++ G+V S KLI D+ TG L
Sbjct: 5 LYVGNLPFSTNEDEIRDLFAAYGDVTSVKLIVDRETGRL 43
>gi|209809358|ref|YP_002264896.1| putative RNA binding protein [Aliivibrio salmonicida LFI1238]
gi|208010920|emb|CAQ81325.1| putative RNA binding protein [Aliivibrio salmonicida LFI1238]
Length = 78
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L+V LP+TMT+ E++ +F + G + C L+ D+ TGE
Sbjct: 3 LLVRNLPRTMTEYELREMFKAHGSLGYCTLVLDEATGE 40
>gi|322780877|gb|EFZ10106.1| hypothetical protein SINV_16601 [Solenopsis invicta]
Length = 270
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 16 VNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
V S + S +NEE + + LP+TMT E++ FS G +E +++D++T E
Sbjct: 2 VCSRDQGSVRETNEEERWVRLFCVLPKTMTDSELQQEFSKFGAIEYATVVKDRSTNE 58
>gi|151936113|gb|ABS18833.1| ELAV-type RNA binding protein variant B [Caenorhabditis elegans]
Length = 193
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 108 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 58 EVESCKLIRD---KTTGELSVVANSI 80
+E C ++RD K+ G LS +
Sbjct: 167 HIEDCSVLRDQDGKSRGMLSAACCKV 192
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 15 SVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S + N S +PS ++ + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 36 STAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>gi|326524682|dbj|BAK04277.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 657
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+TNL + YLP + +LFS GE+ K+I+D+ TG+
Sbjct: 335 ETNLYIGYLPPMFDDSGLINLFSQFGEIVMAKVIKDRNTGQ 375
>gi|260790683|ref|XP_002590371.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
gi|229275563|gb|EEN46382.1| hypothetical protein BRAFLDRAFT_216236 [Branchiostoma floridae]
Length = 222
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 11 PAQDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVISFRLVYDRETGK 57
>gi|396467513|ref|XP_003837957.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
gi|312214522|emb|CBX94513.1| hypothetical protein LEMA_P120040.1 [Leptosphaeria maculans JN3]
Length = 1476
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEE-------SKTNLIVNYLPQTMTQEEMKSLFSSVGEVE 60
N ++S N+ +S P + S +NL V + ++T+EE+ LF GEVE
Sbjct: 1215 NARARSASPNNRDSRGPPPERRDDDDESRNSGSNLFVTGIHPSLTEEEVTRLFEKYGEVE 1274
Query: 61 SCKLIRDKTTGE 72
C ++RD T E
Sbjct: 1275 QCNIMRDPHTKE 1286
>gi|242046266|ref|XP_002461004.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
gi|241924381|gb|EER97525.1| hypothetical protein SORBIDRAFT_02g039025 [Sorghum bicolor]
Length = 83
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
T + V+ L T+EE K +FSS G VE +L+RD+ TG +
Sbjct: 6 TEIFVSRLSFYTTEEEFKDVFSSFGTVEEARLMRDQQTGRI 46
>gi|91223027|ref|ZP_01258293.1| hypothetical protein V12G01_04271 [Vibrio alginolyticus 12G01]
gi|91191840|gb|EAS78103.1| hypothetical protein V12G01_04271 [Vibrio alginolyticus 12G01]
Length = 79
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L+V L + MT+++++ LFS+ G+VE C L+ D+ TG
Sbjct: 2 KLLVRNLARHMTEQDIRKLFSAYGKVELCSLVLDQDTG 39
>gi|293333224|ref|NP_001169298.1| uncharacterized protein LOC100383162 [Zea mays]
gi|224028499|gb|ACN33325.1| unknown [Zea mays]
gi|414588978|tpg|DAA39549.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 735
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 28 NEESKTN---LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ +S++N L V +P+T T+E+++ LF G+V LI+D+ TGE
Sbjct: 114 DHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGE 161
>gi|31074953|gb|AAP42140.1| RNA-binding protein 4 [Trypanosoma cruzi]
Length = 143
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVES--CKLIRDK 68
+KT LIVN+LPQ +T + + LF+ GE+ + K+I D+
Sbjct: 44 TKTQLIVNFLPQFLTDDGFRELFTPFGEIHTKPTKIIYDR 83
>gi|332658328|gb|AEE83728.1| RNA binding / abscisic acid binding protein [Arabidopsis
thaliana]
Length = 672
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIR 66
+G ++ H S + T ++ S T L V +P+T T+EE++ F G V LI+
Sbjct: 19 SGQKRGYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIK 78
Query: 67 DKTTGE 72
DK TG+
Sbjct: 79 DKRTGQ 84
>gi|414588979|tpg|DAA39550.1| TPA: hypothetical protein ZEAMMB73_959869 [Zea mays]
Length = 708
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 28 NEESKTN---LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ +S++N L V +P+T T+E+++ LF G+V LI+D+ TGE
Sbjct: 114 DHDSRSNYVKLFVGSVPRTATEEDVRPLFEEHGDVLEVALIKDRKTGE 161
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +MT+EE+K +F+ GE+ + LI DK TG+
Sbjct: 2 NIYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQ 40
>gi|357635300|ref|ZP_09133178.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|357583854|gb|EHJ49187.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
Length = 92
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V LP T++ ++ LF+ GEV+S KLI D+ TG+
Sbjct: 4 NIYVGNLPFRTTEDSVRDLFARYGEVQSVKLISDRETGK 42
>gi|440293224|gb|ELP86367.1| polyadenylate-binding protein, putative [Entamoeba invadens IP1]
Length = 519
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 3 AMPQQNGSL-HNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
A+ NG+L +VN S E++TNL V + +T++Q+EM+ +F + GE+ S
Sbjct: 72 AIETMNGALIDGKTVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEIIS 131
Query: 62 CKL 64
KL
Sbjct: 132 VKL 134
>gi|341896837|gb|EGT52772.1| CBN-ETR-1 protein [Caenorhabditis brenneri]
Length = 585
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +FS G
Sbjct: 101 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFSKYG 159
Query: 58 EVESCKLIRDK 68
++E C ++RD+
Sbjct: 160 QIEDCSVLRDQ 170
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 20 NSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
N S +PS +S T + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 34 NDVSPSPSEPDSDTIKMFVGQIPRNWNEVDCRRLFEQYGPVFSCNILRDKST 85
>gi|92429389|gb|ABE77152.1| RNA-binding protein HUD3, partial [Mus musculus]
Length = 62
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/21 (80%), Positives = 19/21 (90%)
Query: 29 EESKTNLIVNYLPQTMTQEEM 49
++SKTNLIVNYLPQ MTQEE
Sbjct: 42 DDSKTNLIVNYLPQNMTQEEF 62
>gi|342180347|emb|CCC89824.1| putative RNA-binding protein [Trypanosoma congolense IL3000]
Length = 534
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+TNL V+ +P+TM + + +LF GE+ S ++R+ TGE
Sbjct: 108 RSRTNLFVSNIPRTMGKSGLTTLFEPYGEIVSAAVMRNIHTGE 150
>gi|357129324|ref|XP_003566314.1| PREDICTED: CUGBP Elav-like family member 2-like [Brachypodium
distachyon]
Length = 459
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
EES L V +P+ MT+ E+ ++F V V+ +IRDK T
Sbjct: 35 EESSVKLFVGQVPKQMTEAELAAMFRDVAIVDEVTVIRDKAT 76
>gi|397466676|ref|XP_003805076.1| PREDICTED: LOW QUALITY PROTEIN: DAZ-associated protein 1 [Pan
paniscus]
Length = 460
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 3 AMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESC 62
+ PQ+ SL + + + P L V L + TQE ++S FS GEV C
Sbjct: 33 STPQETWSLGATCSGTLVAVQLLPWESTPGRKLFVGGLDWSTTQETLRSYFSQYGEVVDC 92
Query: 63 KLIRDKTTGE 72
+++DKTT +
Sbjct: 93 VIMKDKTTNQ 102
>gi|149055454|gb|EDM07038.1| rCG38164 [Rattus norvegicus]
Length = 363
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|330925215|ref|XP_003300959.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
gi|311324663|gb|EFQ90950.1| hypothetical protein PTT_12345 [Pyrenophora teres f. teres 0-1]
Length = 275
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +NL V + T+++EE+ LF GEVE C ++RD T E
Sbjct: 63 SGSNLFVTGIHPTLSEEEVTRLFEKYGEVEQCNIMRDPHTKE 104
>gi|86608306|ref|YP_477068.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556848|gb|ABD01805.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 175
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L V LP+ + ++ ++ LF S GEV S K+IRD+ TG+
Sbjct: 5 LYVGNLPEEVDRQALEKLFRSAGEVISTKVIRDRKTGK 42
>gi|345887600|ref|ZP_08838771.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
gi|345041635|gb|EGW45774.1| hypothetical protein HMPREF0178_01545 [Bilophila sp. 4_1_30]
Length = 106
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+L V LP + T+++++ LF+ GEV S KL+ D+ TG
Sbjct: 20 SLYVGNLPWSATEDDVRDLFAPYGEVTSVKLVSDRETGR 58
>gi|47224740|emb|CAG00334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 413
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S +E T + V +P++ ++E++K F G++E C ++++KTTGE
Sbjct: 89 SRSSTRHRDVEDEELTRIFVT-IPKSYSEEDLKETFKEYGDIEYCVILKNKTTGE 142
>gi|323498758|ref|ZP_08103745.1| RNA-binding protein [Vibrio sinaloensis DSM 21326]
gi|323316186|gb|EGA69210.1| RNA-binding protein [Vibrio sinaloensis DSM 21326]
Length = 149
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S+ + P N+ S L V LP + +K LFS GEV + +L++DK TG+
Sbjct: 46 SNTTPIDAPQNDPSTNTLYVGNLPYKANESNVKELFSKHGEVFAVRLMKDKRTGK 100
>gi|224124176|ref|XP_002319264.1| predicted protein [Populus trichocarpa]
gi|118487492|gb|ABK95573.1| unknown [Populus trichocarpa]
gi|222857640|gb|EEE95187.1| predicted protein [Populus trichocarpa]
Length = 149
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 24 QTPSNE--ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
QTP+ E E TNL V+ L + T E ++ FS GEV K++ D+T+G
Sbjct: 43 QTPAREQAEPNTNLFVSGLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSG 92
>gi|148688462|gb|EDL20409.1| cleavage stimulation factor, 3' pre-RNA subunit 2 [Mus musculus]
Length = 363
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|392404677|ref|YP_006441289.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
gi|390612631|gb|AFM13783.1| RNP-1 like RNA-binding protein [Turneriella parva DSM 21527]
Length = 141
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V L T EE++S F + G+V S K++RD+ TG
Sbjct: 2 NIYVGNLAYNATDEELRSAFEAFGQVTSVKIVRDRDTG 39
>gi|168037994|ref|XP_001771487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677214|gb|EDQ63687.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 774
Score = 39.7 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ NL V YLP ++ E + LF+ G VE K+IRD+ TG
Sbjct: 461 DDDANLYVGYLPSSVDDEGLARLFAPFGAVEHAKVIRDRLTG 502
>gi|348667006|gb|EGZ06832.1| hypothetical protein PHYSODRAFT_353005 [Phytophthora sojae]
Length = 507
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 11 LHNSSVNSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
L V + AS+T S E T NL + +LP +T ++ + F+ G V S K+ DK
Sbjct: 327 LQGQGVEAAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDK 386
Query: 69 TTGE 72
TGE
Sbjct: 387 ITGE 390
>gi|28901577|ref|NP_801232.1| hypothetical protein VPA1722 [Vibrio parahaemolyticus RIMD
2210633]
gi|153840184|ref|ZP_01992851.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|153840186|ref|ZP_01992853.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|260880413|ref|ZP_05892768.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
gi|308095069|ref|ZP_05903277.2| conserved domain protein [Vibrio parahaemolyticus Peru-466]
gi|308125551|ref|ZP_05775997.2| conserved domain protein [Vibrio parahaemolyticus K5030]
gi|308126193|ref|ZP_05908525.2| conserved domain protein [Vibrio parahaemolyticus AQ4037]
gi|417323309|ref|ZP_12109839.1| hypothetical protein VP10329_11491 [Vibrio parahaemolyticus
10329]
gi|28810124|dbj|BAC63065.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149746148|gb|EDM57276.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|149746162|gb|EDM57288.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|308089421|gb|EFO39116.1| conserved domain protein [Vibrio parahaemolyticus Peru-466]
gi|308092192|gb|EFO41887.1| conserved domain protein [Vibrio parahaemolyticus AN-5034]
gi|308109988|gb|EFO47528.1| conserved domain protein [Vibrio parahaemolyticus AQ4037]
gi|308112279|gb|EFO49819.1| conserved domain protein [Vibrio parahaemolyticus K5030]
gi|328469505|gb|EGF40451.1| hypothetical protein VP10329_11491 [Vibrio parahaemolyticus
10329]
Length = 79
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 27/38 (71%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L+V L + MT+++++ LFS+ G+VE C L+ D+ TG
Sbjct: 2 KLLVRNLARHMTEQDIRKLFSAYGKVELCSLVLDQETG 39
>gi|357635456|ref|ZP_09133334.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|386393392|ref|ZP_10078173.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|357584010|gb|EHJ49343.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|385734270|gb|EIG54468.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 98
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V LP + ++E++ +FS+ GEV+S LI D+ TG L
Sbjct: 5 LYVGNLPFSTNEDEIRDMFSAYGEVQSVNLIVDRETGRL 43
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 31/45 (68%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+ +S+TNL ++ +P M Q E+++LF+ G++ S ++R+ TG
Sbjct: 109 SDNQSRTNLFISNIPHKMEQRELENLFAPYGQILSAAVMRNIHTG 153
>gi|206900968|ref|YP_002250013.1| RNA-binding protein [Dictyoglomus thermophilum H-6-12]
gi|206740071|gb|ACI19129.1| RNA-binding protein [Dictyoglomus thermophilum H-6-12]
Length = 92
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
SKT L V LP + T+EE+K++F+S G V S ++I D+ TG
Sbjct: 2 SKT-LYVGNLPWSTTEEELKNIFASHGTVYSARIISDRNTG 41
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +T+EE++ FSS GEV S LI D+ TG+
Sbjct: 2 NIYVGNLAYGVTEEELREAFSSFGEVTSANLIIDRNTGQ 40
>gi|440901693|gb|ELR52585.1| Cleavage stimulation factor subunit 2 [Bos grunniens mutus]
Length = 619
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|242036065|ref|XP_002465427.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
gi|241919281|gb|EER92425.1| hypothetical protein SORBIDRAFT_01g038690 [Sorghum bicolor]
Length = 727
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+TNL + YLP TM + SLFS G++ K+I+D+ TG+
Sbjct: 427 ETNLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQ 467
>gi|311276614|ref|XP_003135279.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Sus scrofa]
Length = 572
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|375012528|ref|YP_004989516.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
gi|359348452|gb|AEV32871.1| RRM domain-containing RNA-binding protein [Owenweeksia
hongkongensis DSM 17368]
Length = 111
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP +E+++ F + GEV+S ++I DK TG
Sbjct: 2 NIFVGSLPWATEEEDLRGAFEAYGEVDSVRIITDKFTG 39
>gi|402549499|ref|XP_001566634.2| RNA binding protein, putative [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|356482940|emb|CAM40148.2| RNA binding protein, putative [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 922
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E S TNLI+ + MT+ ++ LF GEV SC ++RD TG
Sbjct: 213 EHSSTNLILYNIGSHMTEVALQKLFDPFGEVVSCAVMRDIHTG 255
>gi|335306285|ref|XP_003360436.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Sus scrofa]
Length = 592
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|34810648|pdb|1P1T|A Chain A, Nmr Structure Of The N-Terminal Rrm Domain Of Cleavage
Stimulation Factor 64 Kda Subunit
Length = 104
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 2 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 48
>gi|403298766|ref|XP_003940178.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3
[Saimiri boliviensis boliviensis]
Length = 597
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|421091647|ref|ZP_15552412.1| hypothetical protein LEP1GSC131_2854 [Leptospira kirschneri str.
200802841]
gi|421108364|ref|ZP_15568904.1| hypothetical protein LEP1GSC082_3169 [Leptospira kirschneri str.
H2]
gi|409999392|gb|EKO50083.1| hypothetical protein LEP1GSC131_2854 [Leptospira kirschneri str.
200802841]
gi|410006630|gb|EKO60381.1| hypothetical protein LEP1GSC082_3169 [Leptospira kirschneri str.
H2]
Length = 121
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|297792921|ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310180|gb|EFH40604.1| RNA recognition motif-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 156
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 18 SHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S + SQTP+ E TNL V+ L + T E +++ F+ GEV K++ D+ +G
Sbjct: 39 SPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSG 94
>gi|148238299|ref|NP_001080090.1| RNA binding motif protein 45 [Xenopus laevis]
gi|27924225|gb|AAH45039.1| Drbp1-pending-prov protein [Xenopus laevis]
Length = 476
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E+ + I +P++ T+E++K F G++E C +I++K TGE
Sbjct: 109 EDEELTRIFVMIPKSYTEEDVKQKFKEYGQIEYCSIIKNKNTGE 152
>gi|70939105|ref|XP_740139.1| RNA binding protein [Plasmodium chabaudi chabaudi]
gi|56517645|emb|CAH76403.1| RNA binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 248
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 4 MPQQNGSLHNSSVNSHNSASQTPSNEESKTN---LIVNYLPQTMTQEEMKSLFSSVGEVE 60
+ QQ GSL + P N ES + L + LP+ +T+E +K +FS G VE
Sbjct: 152 LDQQLGSLQVKYASGEVMKLGFPQNVESGVDQAKLFIGSLPKNITEESIKDMFSVYGSVE 211
Query: 61 SCKLIRDKTTG 71
+++D +TG
Sbjct: 212 EVFIMKDNSTG 222
>gi|344296752|ref|XP_003420068.1| PREDICTED: cleavage stimulation factor subunit 2-like [Loxodonta
africana]
Length = 582
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|297304342|ref|XP_001089558.2| PREDICTED: cleavage stimulation factor subunit 2-like [Macaca
mulatta]
gi|402910777|ref|XP_003918028.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 3 [Papio
anubis]
gi|355704983|gb|EHH30908.1| hypothetical protein EGK_20728 [Macaca mulatta]
gi|355757534|gb|EHH61059.1| hypothetical protein EGM_18986 [Macaca fascicularis]
Length = 597
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|119224067|gb|AAI26544.1| CSTF2 protein [Bos taurus]
Length = 592
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|403298762|ref|XP_003940176.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Saimiri boliviensis boliviensis]
gi|403298764|ref|XP_003940177.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 577
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|395850633|ref|XP_003797884.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 2
[Otolemur garnettii]
Length = 596
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|395850631|ref|XP_003797883.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform 1
[Otolemur garnettii]
Length = 576
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|217966813|ref|YP_002352319.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
gi|217335912|gb|ACK41705.1| RNP-1 like RNA-binding protein [Dictyoglomus turgidum DSM 6724]
Length = 92
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
SKT L V LP + T+EE+K++F+S G V S ++I D+ TG
Sbjct: 2 SKT-LYVGNLPWSTTEEELKNIFASHGTVYSARIISDRNTG 41
>gi|116328543|ref|YP_798263.1| RNA binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116331283|ref|YP_801001.1| RNA binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121287|gb|ABJ79330.1| RNA binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124972|gb|ABJ76243.1| RNA binding protein [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 121
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|15239676|ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
gi|18175762|gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gi|21553374|gb|AAM62467.1| unknown [Arabidopsis thaliana]
gi|332009129|gb|AED96512.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 156
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 18 SHNSASQTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S + SQTP+ E TNL V+ L + T E +++ F+ GEV K++ D+ +G
Sbjct: 39 SPQAESQTPARPQAEPSTNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSG 94
>gi|296235968|ref|XP_002763125.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1
[Callithrix jacchus]
Length = 597
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|192764310|gb|ACF05699.1| betaCstF-64 variant 2 [Homo sapiens]
Length = 597
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|390480015|ref|XP_003735829.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|27807239|ref|NP_777110.1| cleavage stimulation factor subunit 2 [Bos taurus]
gi|71153228|sp|Q8HXM1.1|CSTF2_BOVIN RecName: Full=Cleavage stimulation factor subunit 2; AltName:
Full=CF-1 64 kDa subunit; AltName: Full=Cleavage
stimulation factor 64 kDa subunit; Short=CSTF 64 kDa
subunit; Short=CstF-64
gi|24416593|gb|AAN05427.1| CstF-64 [Bos taurus]
gi|296470997|tpg|DAA13112.1| TPA: cleavage stimulation factor 64 kDa subunit [Bos taurus]
Length = 572
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|426257829|ref|XP_004022524.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 1 [Ovis
aries]
Length = 572
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|268533976|ref|XP_002632118.1| C. briggsae CBR-ETR-1 protein [Caenorhabditis briggsae]
Length = 574
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 1 MD-AMPQQNG--SLHNSSVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSV 56
MD A+P +G + + ++N AS +PS +S + V +P+ + + + LF
Sbjct: 16 MDPAVPDIDGKDDVKDVPSTANNDASPSPSEPDSDAIKMFVGQIPRQWNEVDCRRLFEQY 75
Query: 57 GEVESCKLIRDKTT 70
G V SC ++RDK+T
Sbjct: 76 GSVYSCNILRDKST 89
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 105 DAIEAQ-GALHNIKVIDGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 163
Query: 58 EVESCKLIRD 67
+E C ++RD
Sbjct: 164 LIEDCSVLRD 173
>gi|421097656|ref|ZP_15558336.1| hypothetical protein LEP1GSC125_0543 [Leptospira borgpetersenii
str. 200901122]
gi|410799206|gb|EKS01286.1| hypothetical protein LEP1GSC125_0543 [Leptospira borgpetersenii
str. 200901122]
Length = 121
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|380798899|gb|AFE71325.1| cleavage stimulation factor subunit 2, partial [Macaca mulatta]
Length = 575
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 7 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 53
>gi|390949102|ref|YP_006412861.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
gi|390425671|gb|AFL72736.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
Length = 90
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +TQEE++ F + GE+ S LI DK TG+
Sbjct: 2 NIYVGNLAYGVTQEELRDAFGAYGEISSVNLITDKFTGD 40
>gi|256830132|ref|YP_003158860.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
gi|256579308|gb|ACU90444.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
Length = 89
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++++++LF++ G+V + KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEQDVETLFATYGQVANVKLISDRETG 41
>gi|393912218|gb|EFO22141.2| RNA binding protein [Loa loa]
Length = 483
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 2 DAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
D +NG L +S +++ +++ +P S TN+ + L Q T ++++ + + G + S
Sbjct: 55 DGTQSRNG-LRSSGISTRRNSTGSPVPSLSLTNVYIRGLEQNTTDDDLRDMCAKFGRIAS 113
Query: 62 CKLIRDKTTGE 72
K I DKTTG+
Sbjct: 114 TKAIMDKTTGQ 124
>gi|426257831|ref|XP_004022525.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Ovis
aries]
Length = 592
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|212554597|gb|ACJ27051.1| RNA-binding region RNP-1 (RNA recognition motif) [Shewanella
piezotolerans WP3]
Length = 153
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 15 SVNSHNSASQTPSNEESKTN----LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S+ S + S S+ E T L V LP + + E+K+LF G V S +L+RD+ T
Sbjct: 44 SIQSKSGTSAAASSNEPYTGPTMTLYVGNLPYRVHEGEVKALFGEYGPVNSVRLVRDRKT 103
Query: 71 G 71
G
Sbjct: 104 G 104
>gi|317050466|ref|YP_004111582.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945550|gb|ADU65026.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 82
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
+ V LP + T++E+ +LF+ G+V S KLI D+ TG+L A
Sbjct: 4 IYVGNLPFSTTEDELGNLFAEYGDVYSIKLIADRETGKLRGFA 46
>gi|242076850|ref|XP_002448361.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
gi|241939544|gb|EES12689.1| hypothetical protein SORBIDRAFT_06g025810 [Sorghum bicolor]
Length = 727
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+TNL + YLP TM + SLFS G++ K+I+D+ TG+
Sbjct: 428 ETNLYIGYLPPTMDDPGLISLFSQFGDIVMAKVIKDRNTGQ 468
>gi|456865289|gb|EMF83649.1| hypothetical protein LEP1GSC188_1261 [Leptospira weilii serovar
Topaz str. LT2116]
Length = 121
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|418719335|ref|ZP_13278535.1| hypothetical protein LEP1GSC101_3911 [Leptospira borgpetersenii
str. UI 09149]
gi|418738917|ref|ZP_13295310.1| hypothetical protein LEP1GSC121_3439 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410744488|gb|EKQ93229.1| hypothetical protein LEP1GSC101_3911 [Leptospira borgpetersenii
str. UI 09149]
gi|410745615|gb|EKQ98525.1| hypothetical protein LEP1GSC121_3439 [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 129
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 13 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 47
>gi|359727804|ref|ZP_09266500.1| RNA binding protein [Leptospira weilii str. 2006001855]
gi|417779907|ref|ZP_12427683.1| hypothetical protein LEP1GSC036_2755 [Leptospira weilii str.
2006001853]
gi|410779876|gb|EKR64479.1| hypothetical protein LEP1GSC036_2755 [Leptospira weilii str.
2006001853]
Length = 121
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|345326434|ref|XP_001510704.2| PREDICTED: hypothetical protein LOC100079778 [Ornithorhynchus
anatinus]
Length = 620
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 321 NLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 358
>gi|332861156|ref|XP_529072.3| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
troglodytes]
gi|397478198|ref|XP_003810440.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2 [Pan
paniscus]
gi|426396655|ref|XP_004064547.1| PREDICTED: cleavage stimulation factor subunit 2 isoform 2
[Gorilla gorilla gorilla]
Length = 597
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|358421036|ref|XP_001254105.2| PREDICTED: cleavage stimulation factor subunit 2-like [Bos
taurus]
Length = 331
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|317152646|ref|YP_004120694.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
gi|316942897|gb|ADU61948.1| RNP-1 like RNA-binding protein [Desulfovibrio aespoeensis Aspo-2]
Length = 87
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
NL V LP T+EE+++ F + GEV S KL+ D T
Sbjct: 4 NLYVGNLPWNCTEEELRAAFEAYGEVRSVKLVNDHET 40
>gi|410900730|ref|XP_003963849.1| PREDICTED: RNA-binding protein 45-like [Takifugu rubripes]
Length = 464
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S +E T + V +P++ T+E++K F G++E C ++++K TGE
Sbjct: 97 SRSSTRHRDVEDEELTRIFVT-IPKSYTEEDLKETFKEYGDIEYCVILKNKATGE 150
>gi|46579668|ref|YP_010476.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602850|ref|YP_967250.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153021|ref|YP_005701957.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46449083|gb|AAS95735.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120563079|gb|ABM28823.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311233465|gb|ADP86319.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 90
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
SKT L V LP T QE+++ LF++ GEV S KL+ D+ TG
Sbjct: 2 SKT-LYVGNLPFTAEQEDVRDLFAAHGEVVSVKLMFDRETG 41
>gi|410450276|ref|ZP_11304317.1| hypothetical protein LEP1GSC068_0704 [Leptospira sp. Fiocruz
LV3954]
gi|410015789|gb|EKO77880.1| hypothetical protein LEP1GSC068_0704 [Leptospira sp. Fiocruz
LV3954]
gi|456874657|gb|EMF89929.1| hypothetical protein LEP1GSC005_0936 [Leptospira santarosai str.
ST188]
Length = 121
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGAVREVHIKKDKTTG 39
>gi|312078882|ref|XP_003141933.1| RNA binding protein [Loa loa]
Length = 481
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 2 DAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVES 61
D +NG L +S +++ +++ +P S TN+ + L Q T ++++ + + G + S
Sbjct: 53 DGTQSRNG-LRSSGISTRRNSTGSPVPSLSLTNVYIRGLEQNTTDDDLRDMCAKFGRIAS 111
Query: 62 CKLIRDKTTGE 72
K I DKTTG+
Sbjct: 112 TKAIMDKTTGQ 122
>gi|347965530|ref|XP_003435781.1| AGAP013048-PA [Anopheles gambiae str. PEST]
gi|333470469|gb|EGK97632.1| AGAP013048-PA [Anopheles gambiae str. PEST]
Length = 93
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LP T++ +E+K+ FS G V S +I DK+TG
Sbjct: 18 LFVGNLPWTVSTKELKTYFSKYGHVHSTNVIYDKSTG 54
>gi|375148329|ref|YP_005010770.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361062375|gb|AEW01367.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 122
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V L MT E++++LF G V S K+++DKT+G
Sbjct: 2 NIYVGNLSWQMTDEDLRTLFEQYGSVTSAKIVKDKTSG 39
>gi|326510015|dbj|BAJ87224.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 153 DNKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 198
>gi|226503733|ref|NP_001142011.1| uncharacterized protein LOC100274164 [Zea mays]
gi|194706784|gb|ACF87476.1| unknown [Zea mays]
Length = 212
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 23/49 (46%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIF 81
NL + ++PQ ++ S F S G V S K+ DK TG N F
Sbjct: 147 ANLFIYHIPQEFGDHDLASAFHSFGRVLSAKVFVDKATGVSKCFGNRFF 195
>gi|91083715|ref|XP_970185.1| PREDICTED: similar to AGAP005505-PA [Tribolium castaneum]
gi|270007883|gb|EFA04331.1| hypothetical protein TcasGA2_TC014625 [Tribolium castaneum]
Length = 464
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 8 NGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
N S+ S + S+ SNEE +T + +P++MT E+ F GE++ ++RD
Sbjct: 90 NRSIRVMIAASRDQGSKRDSNEEERTLRLFVVVPKSMTDSELYDTFKEFGEIDYATIMRD 149
Query: 68 KTTGE 72
K + E
Sbjct: 150 KESRE 154
>gi|398332580|ref|ZP_10517285.1| RNA binding protein [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 121
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V+ + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGTVQEVHIKKDKTTG 39
>gi|359686352|ref|ZP_09256353.1| RNA binding protein [Leptospira santarosai str. 2000030832]
gi|421114349|ref|ZP_15574771.1| hypothetical protein LEP1GSC071_1424 [Leptospira santarosai str.
JET]
gi|422004173|ref|ZP_16351395.1| RNA binding protein [Leptospira santarosai serovar Shermani str.
LT 821]
gi|410800308|gb|EKS06504.1| hypothetical protein LEP1GSC071_1424 [Leptospira santarosai str.
JET]
gi|417257151|gb|EKT86557.1| RNA binding protein [Leptospira santarosai serovar Shermani str.
LT 821]
Length = 121
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGAVREVHIKKDKTTG 39
>gi|390464354|ref|XP_002749325.2| PREDICTED: RNA-binding protein 45-like [Callithrix jacchus]
Length = 417
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E++ F G++E C +I++K TGE
Sbjct: 50 SRSSGSHQDVEDEELTRIFV-MIPKSYTEEDLWEKFKVYGDIEYCSIIKNKVTGE 103
>gi|344275007|ref|XP_003409305.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant
[Loxodonta africana]
Length = 609
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGK 55
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+ V LP T+T++E K FS G+VE ++IRD T
Sbjct: 109 IFVGGLPSTVTEDEFKDFFSKYGKVEEHQIIRDHET 144
>gi|418744200|ref|ZP_13300556.1| hypothetical protein LEP1GSC163_2155 [Leptospira santarosai str.
CBC379]
gi|418752017|ref|ZP_13308289.1| hypothetical protein LEP1GSC179_1293 [Leptospira santarosai str.
MOR084]
gi|409967746|gb|EKO35571.1| hypothetical protein LEP1GSC179_1293 [Leptospira santarosai str.
MOR084]
gi|410794651|gb|EKR92551.1| hypothetical protein LEP1GSC163_2155 [Leptospira santarosai str.
CBC379]
Length = 121
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 37 VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
V LPQ +T++E+K +FS G V + +DKTTG
Sbjct: 5 VGNLPQELTEDELKKIFSEFGAVREVHIKKDKTTG 39
>gi|145219698|ref|YP_001130407.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM
265]
gi|145205862|gb|ABP36905.1| RNP-1 like RNA-binding protein [Chlorobium phaeovibrioides DSM
265]
Length = 90
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP T+++++++ FS G+VES +I DK +G
Sbjct: 2 NIYVGNLPYTVSEDDLRDAFSEFGQVESANIIMDKFSG 39
>gi|50555992|ref|XP_505404.1| YALI0F14245p [Yarrowia lipolytica]
gi|49651274|emb|CAG78213.1| YALI0F14245p [Yarrowia lipolytica CLIB122]
Length = 275
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 16 VNSHNSASQTPSNEESKTNLI-VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S+ +A+ T ++++S T +I + +P +E+M S FS G++ +L R+KTTG
Sbjct: 85 AKSNRAAATTKASKKSGTGVIYLGRIPHGFYEEQMHSYFSQFGDISRLRLSRNKTTG 141
>gi|317050314|ref|YP_004111430.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
gi|316945398|gb|ADU64874.1| RNP-1 like RNA-binding protein [Desulfurispirillum indicum S5]
Length = 84
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 40 LPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
LP T T++E+ +LF+ G+V S KLI D+ TG L
Sbjct: 11 LPFTTTEDELGNLFAQYGDVYSVKLISDRETGRL 44
>gi|57530169|ref|NP_001006433.1| cleavage stimulation factor subunit 2 [Gallus gallus]
gi|53128673|emb|CAG31323.1| hypothetical protein RCJMB04_5b8 [Gallus gallus]
Length = 475
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P+ + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 9 PAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 55
>gi|32482130|gb|AAP84415.1| FCA protein, partial [Triticum aestivum]
Length = 743
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 121 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 165
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum
IAM 14863]
Length = 86
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ V LP + T E++++LF GEVE+ ++I D+ TG
Sbjct: 5 IYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETG 41
>gi|412986499|emb|CCO14925.1| RNA-binding protein [Bathycoccus prasinos]
Length = 716
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFA-PEL 85
+ V LP+T T+EE+ FS G V +LI DK TG FA PE+
Sbjct: 456 VFVGGLPKTATEEEVGWFFSQYGPVARVRLIYDKETGASKRYGFVEFAHPEI 507
>gi|291228918|ref|XP_002734426.1| PREDICTED: cleavage stimulation factor subunit 2-like
[Saccoglossus kowalevskii]
Length = 220
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 20 NSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
++ Q+ + + S ++ V +P T+E++K +FS VG V S +L+ D+ TG+
Sbjct: 2 SAVGQSAATDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGK 54
>gi|302818861|ref|XP_002991103.1| hypothetical protein SELMODRAFT_450105 [Selaginella
moellendorffii]
gi|300141197|gb|EFJ07911.1| hypothetical protein SELMODRAFT_450105 [Selaginella
moellendorffii]
Length = 509
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ + L V +P+T+T+++++S+F GEV +I+D+ TG
Sbjct: 37 GQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
>gi|119631450|gb|EAX11045.1| developmentally regulated RNA-binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 554
Score = 38.9 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 249 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 302
>gi|349603947|gb|AEP99634.1| RNA-binding protein 45-like protein, partial [Equus caballus]
Length = 273
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E+ + I +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 2 EDEELTRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 45
>gi|222142946|gb|ACI16484.2| flowering time control protein [Hordeum vulgare]
Length = 743
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 119 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 163
>gi|376295896|ref|YP_005167126.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
gi|323458457|gb|EGB14322.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans
ND132]
Length = 88
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V LP + T++E+++ F + G+V S KLI D+ TG
Sbjct: 4 NIYVGNLPWSATEDEVRAAFEAHGQVSSVKLIEDRETG 41
>gi|50604140|gb|AAH77252.1| LOC398218 protein [Xenopus laevis]
Length = 405
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
L V L + TQE ++S FS GEV C +++DKTT
Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTT 47
>gi|32482094|gb|AAP84400.1| FCA protein [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 114 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 158
>gi|32482112|gb|AAP84408.1| FCA protein [Triticum aestivum]
Length = 741
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 118 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 162
>gi|46580620|ref|YP_011428.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602071|ref|YP_966471.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|387153909|ref|YP_005702845.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
gi|46450039|gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120562300|gb|ABM28044.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris DP4]
gi|311234353|gb|ADP87207.1| RNP-1 like RNA-binding protein [Desulfovibrio vulgaris RCH1]
Length = 89
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LP + ++++++SLF++ GEV S KLI D+ TG
Sbjct: 5 LYVGNLPFSASEDDVRSLFTNYGEVVSVKLIMDRETG 41
>gi|281206149|gb|EFA80338.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 640
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDK 68
N+ NL + LP T++ +++K LFS GE+ CK++ D+
Sbjct: 152 NKYPSNNLFLKPLPATLSDDQLKELFSPFGEILECKVMIDQ 192
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
E+ +TN+ V YLP E+ +LFS G+V S K++ D
Sbjct: 65 EKDQTNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVD 103
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L V +LP + + LFS G ++S ++I DK TGE
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGE 545
>gi|32482147|gb|AAP84419.1| FCA-B2 [Triticum aestivum]
Length = 740
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 117 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 161
>gi|307176221|gb|EFN65860.1| Sex-lethal-like protein [Camponotus floridanus]
Length = 272
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS EE K TNL V LP+ +T+ ++ +FS G + +++DK TG
Sbjct: 68 PSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTG 114
>gi|373459913|ref|ZP_09551680.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
gi|371721577|gb|EHO43348.1| RNP-1 like RNA-binding protein [Caldithrix abyssi DSM 13497]
Length = 99
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
N+ V +P++ ++ ++ LF G V KL+RD+ TGEL
Sbjct: 2 NIYVGNIPKSTDEQTIRDLFEEYGSVSEVKLLRDRYTGEL 41
>gi|344268339|ref|XP_003406018.1| PREDICTED: RNA-binding protein 45 [Loxodonta africana]
Length = 450
Score = 38.9 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S S +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 82 SRSSGSHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 135
>gi|146083784|ref|XP_001464834.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
gi|134068929|emb|CAM67070.1| hypothetical protein, unknown function [Leishmania infantum
JPCM5]
Length = 347
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S TNL V YLP+ + ++ +FS+ G++ S ++RD +G+
Sbjct: 24 SSTNLFVRYLPREVDDNRLREIFSAFGKITSSMVMRDIYSGQ 65
>gi|32482381|gb|AAP84380.1| FCA protein [Triticum aestivum]
Length = 721
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 99 NKSGYVKLFVGSVPRTANEDDVRPLFEGHGDVLEVALIRDRKTGE 143
>gi|451997220|gb|EMD89685.1| hypothetical protein COCHEDRAFT_1177492 [Cochliobolus
heterostrophus C5]
Length = 276
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +NL V + T+T++E+ LF G+VE C ++RD T E
Sbjct: 63 SGSNLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHTKE 104
>gi|451852456|gb|EMD65751.1| hypothetical protein COCSADRAFT_170220 [Cochliobolus sativus
ND90Pr]
Length = 276
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +NL V + T+T++E+ LF G+VE C ++RD T E
Sbjct: 63 SGSNLFVTGIHPTLTEDEVTRLFEKYGDVEQCNIMRDPHTKE 104
>gi|32482079|gb|AAP84395.1| FCA protein [Triticum aestivum]
Length = 734
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 112 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 156
>gi|32482081|gb|AAP84396.1| FCA protein [Triticum aestivum]
Length = 719
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 111 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 155
>gi|32482140|gb|AAP84416.1| FCA protein, partial [Triticum aestivum]
Length = 740
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|390941633|ref|YP_006405370.1| RRM domain-containing RNA-binding protein [Sulfurospirillum
barnesii SES-3]
gi|390194740|gb|AFL69795.1| RRM domain-containing RNA-binding protein [Sulfurospirillum
barnesii SES-3]
Length = 91
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V + MT +E+K +FS+ GEV S ++I D+ TG
Sbjct: 2 NIYVGNVKYEMTGDELKEMFSAYGEVSSARIISDRDTG 39
>gi|344345229|ref|ZP_08776084.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
gi|343803180|gb|EGV21091.1| RNP-1 like RNA-binding protein [Marichromatium purpuratum 984]
Length = 90
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ V LP ++T +E++ +FS GE+ S ++I+DK +G+
Sbjct: 3 IYVGNLPYSVTDDELRDIFSGFGELASAEVIKDKFSGQ 40
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
+ S N+ NL V L T+T E+++ LF+ G + SCK++RD
Sbjct: 309 YEQGSSDAGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD 357
>gi|32482106|gb|AAP84405.1| FCA protein [Triticum aestivum]
Length = 735
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|32482059|gb|AAP84387.1| FCA protein [Triticum aestivum]
Length = 728
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 106 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 150
>gi|32482394|gb|AAP84386.1| FCA protein [Triticum aestivum]
Length = 735
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|32482061|gb|AAP84388.1| FCA protein [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|261327113|emb|CBH10089.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 601
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A+ + + +S+TNL V+ +P + + E+ LFS GE+ S ++R+ TG+
Sbjct: 119 AADSRAESQSRTNLFVSNIPHLLGKNELVDLFSPYGEILSAAVMRNIHTGD 169
>gi|32482114|gb|AAP84409.1| FCA protein [Triticum aestivum]
Length = 736
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 114 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 158
>gi|32482092|gb|AAP84399.1| FCA protein [Triticum aestivum]
Length = 740
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 119 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 163
>gi|32482142|gb|AAP84417.1| FCA-A1 [Triticum aestivum]
gi|32482144|gb|AAP84418.1| FCA-A2 [Triticum aestivum]
Length = 741
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 119 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 163
>gi|32482076|gb|AAP84394.1| FCA protein [Triticum aestivum]
Length = 734
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 112 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 156
>gi|32482390|gb|AAP84384.1| FCA protein [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|32482096|gb|AAP84401.1| FCA protein [Triticum aestivum]
Length = 735
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|32482367|gb|AAP84376.1| FCA protein [Triticum aestivum]
Length = 735
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|357126722|ref|XP_003565036.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 1
[Brachypodium distachyon]
Length = 450
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S N QT + NL + ++PQ +E+ F G V S K+ DK TG
Sbjct: 349 SSNGGGQTQTEGPPGANLFIYHIPQEFGDQELSDAFQRFGRVVSAKVFVDKATG 402
>gi|302819965|ref|XP_002991651.1| hypothetical protein SELMODRAFT_451447 [Selaginella
moellendorffii]
gi|300140500|gb|EFJ07222.1| hypothetical protein SELMODRAFT_451447 [Selaginella
moellendorffii]
Length = 480
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ + L V +P+T+T+++++S+F GEV +I+D+ TG
Sbjct: 37 GQHTYVKLFVGSVPRTITEQQVRSMFEEYGEVLEVAIIKDRRTG 80
>gi|151936117|gb|ABS18835.1| ELAV-type RNA binding protein variant D [Caenorhabditis elegans]
Length = 327
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 108 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 58 EVESCKLIRDK 68
+E C ++RD+
Sbjct: 167 HIEDCSVLRDQ 177
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 15 SVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S + N S +PS ++ + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 36 STAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>gi|32482369|gb|AAP84377.1| FCA protein [Triticum aestivum]
Length = 727
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 109 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 153
>gi|32482110|gb|AAP84407.1| FCA protein [Triticum aestivum]
Length = 736
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|381197035|ref|ZP_09904376.1| RNA-binding protein [Acinetobacter lwoffii WJ10621]
Length = 109
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
P E K ++V L +T+T+ E+ LF G V SC LI D TG+
Sbjct: 17 PIFEGCKMKILVRNLERTVTEAELLELFKQYGTVASCNLILDAATGK 63
>gi|32482373|gb|AAP84379.1| FCA protein [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|32482072|gb|AAP84392.1| FCA protein [Triticum aestivum]
Length = 736
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 114 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 158
>gi|32482085|gb|AAP84397.1| FCA protein [Triticum aestivum]
Length = 740
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 118 NKSGYAKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 162
>gi|427704117|ref|YP_007047339.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
gi|427347285|gb|AFY29998.1| RRM domain-containing RNA-binding protein [Cyanobium gracile PCC
6307]
Length = 142
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LPQT +E+ +LFSSVGE K + D+ TG
Sbjct: 3 VRLYVGNLPQTFDAKELDALFSSVGEGVRFKAVNDRETG 41
>gi|32482065|gb|AAP84389.1| FCA protein [Triticum aestivum]
Length = 739
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 118 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 162
>gi|32482125|gb|AAP84413.1| FCA protein, partial [Triticum aestivum]
Length = 722
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 109 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 153
>gi|26354795|dbj|BAC41024.1| unnamed protein product [Mus musculus]
Length = 436
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
E+ + + I +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 116 EDEELSRIFVMIPKSYTEEDLREKFKVYGDIEYCSIIKNKVTGE 159
>gi|32482123|gb|AAP84412.1| FCA protein, partial [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|357126724|ref|XP_003565037.1| PREDICTED: CUGBP Elav-like family member 2-like isoform 2
[Brachypodium distachyon]
Length = 459
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S N QT + NL + ++PQ +E+ F G V S K+ DK TG
Sbjct: 358 SSNGGGQTQTEGPPGANLFIYHIPQEFGDQELSDAFQRFGRVVSAKVFVDKATG 411
>gi|32482090|gb|AAP84398.1| FCA protein [Triticum aestivum]
Length = 719
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 99 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 143
>gi|32482383|gb|AAP84381.1| FCA protein [Triticum aestivum]
Length = 737
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 115 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 159
>gi|32482371|gb|AAP84378.1| FCA protein [Triticum aestivum]
Length = 736
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 114 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRNTGE 158
>gi|32482100|gb|AAP84402.1| FCA protein [Triticum aestivum]
Length = 736
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF + G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFENHGDVLEVALIRDRKTGE 157
>gi|34555648|gb|AAQ74972.1| flowering time control protein isoform OsFCA-2 [Oryza sativa Indica
Group]
Length = 649
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N + L + +P+T T+++++ LF G+V LI+D+ TGE
Sbjct: 117 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGE 161
>gi|406994417|gb|EKE13409.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 155
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LP + TQ+E++ LF+SVG V S +I D+ TG
Sbjct: 26 LFVAGLPFSSTQDELRDLFASVGNVVSTSIITDRETG 62
>gi|325189112|emb|CCA23638.1| CUGBP and ETR3like factor putative [Albugo laibachii Nc14]
Length = 550
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFA-PE 84
L + +P+TMT+ E+ + + GEV +IRDK TG A + FA PE
Sbjct: 78 LFIGQVPRTMTETELLPILEAFGEVVDLTIIRDKLTGSHRGCAFASFASPE 128
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
NL + +LP +T ++ + F+ G V S K+ DK TGE
Sbjct: 404 ANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKLTGE 443
>gi|158288351|ref|XP_559774.3| AGAP009474-PA [Anopheles gambiae str. PEST]
gi|157019209|gb|EAL41386.3| AGAP009474-PA [Anopheles gambiae str. PEST]
Length = 104
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 5 PQQNGSLHNSSVNSHNSASQTPSNEE--------SKTNLIVNYLPQTMTQEEMKSLFSSV 56
PQ +G N + H + P +EE + V +P++M ++++K +F
Sbjct: 21 PQSDGK--NLICDMHLNMHHQPGDEEVVGDQPDPDYIKMFVGQVPRSMDEQQLKEMFEEF 78
Query: 57 GEVESCKLIRDKTTGE 72
G V ++RDKT+G+
Sbjct: 79 GRVHQINVLRDKTSGQ 94
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 5 PQQNGSL-------HNSSVNSHNSASQTPSNE---ESKTNLIVNYLPQTMTQEEMKSLFS 54
P Q GS+ H+++V A P+ + ++ L + L + E + FS
Sbjct: 16 PLQAGSIDGTDQVPHDNAVWRAMQAKYKPNKQVAGDAGCTLFIGRLSKETRAETLVEAFS 75
Query: 55 SVGEVESCKLIRDKTTG 71
GEVE+C+L+RD TG
Sbjct: 76 KYGEVENCRLVRDFVTG 92
>gi|32482102|gb|AAP84403.1| FCA protein [Triticum aestivum]
Length = 730
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 108 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 152
>gi|345870843|ref|ZP_08822793.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
gi|343921312|gb|EGV32033.1| RNP-1 like RNA-binding protein [Thiorhodococcus drewsii AZ1]
Length = 90
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N+ V L ++T+E++++ FS+ GE+ S LI DK TG
Sbjct: 2 NIYVGNLAYSVTEEDLRAAFSTYGEISSASLITDKFTG 39
>gi|317968103|ref|ZP_07969493.1| RNA-binding protein [Synechococcus sp. CB0205]
Length = 142
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
L V LPQ+ +E+++LFSSVGE K ++D+ TG
Sbjct: 5 LYVGNLPQSFDNKELEALFSSVGEGVRFKAVQDRETG 41
>gi|304311883|ref|YP_003811481.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
gi|301797616|emb|CBL45837.1| RNA-binding region RNP-1 (RNA recognition motif) [gamma
proteobacterium HdN1]
Length = 92
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L +++EE+K F + GEV S LI+DK TG+
Sbjct: 2 NIYVGNLAYGVSEEELKEAFGAFGEVASVSLIKDKFTGQ 40
>gi|72387123|ref|XP_843986.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175980|gb|AAX70103.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|70800518|gb|AAZ10427.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 593
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 22 ASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
A+ + + +S+TNL V+ +P + + E+ LFS GE+ S ++R+ TG+
Sbjct: 119 AADSRAESQSRTNLFVSNIPHLLGKNELVDLFSPYGEILSAAVMRNIHTGD 169
>gi|32482074|gb|AAP84393.1| FCA protein [Triticum aestivum]
Length = 724
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 102 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 146
>gi|32482067|gb|AAP84390.1| FCA protein [Triticum aestivum]
Length = 735
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 113 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 157
>gi|32482104|gb|AAP84404.1| FCA protein [Triticum aestivum]
Length = 738
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 116 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 160
>gi|32482116|gb|AAP84410.1| FCA protein [Triticum aestivum]
Length = 707
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 97 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 141
>gi|428185217|gb|EKX54070.1| hypothetical protein GUITHDRAFT_53822, partial [Guillardia theta
CCMP2712]
Length = 80
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TN+ V LP + ++++LF GE+ +C +++DK TG
Sbjct: 3 SDTNVYVGGLPPSYDDLDLRNLFKQFGEIVNCNVLKDKNTG 43
>gi|32482108|gb|AAP84406.1| FCA protein [Triticum aestivum]
Length = 724
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 102 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 146
>gi|256823076|ref|YP_003147039.1| RNP-1 like RNA-binding protein [Kangiella koreensis DSM 16069]
gi|256796615|gb|ACV27271.1| RNP-1 like RNA-binding protein [Kangiella koreensis DSM 16069]
Length = 84
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
L+V L + T+E++K+LF G V+ C LI DK TG+
Sbjct: 3 LLVRNLDRGTTEEQVKALFEEYGTVQWCNLIMDKATGK 40
>gi|33390912|gb|AAQ17123.1| flowering time control protein isoform OsFCA-1 [Oryza sativa Indica
Group]
gi|47496990|dbj|BAD20100.1| Flowering time control protein FCA gamma-like [Oryza sativa
Japonica Group]
gi|50261763|gb|AAT72462.1| FCA gamma protein [Oryza sativa Japonica Group]
gi|58003966|gb|AAW62371.1| FCA [Oryza sativa Japonica Group]
Length = 738
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N + L + +P+T T+++++ LF G+V LI+D+ TGE
Sbjct: 117 NRNNYVKLFIGSVPRTATEDDVRPLFEEHGDVVEVALIKDRKTGE 161
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 23 SQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
SQTP + + L V L + +TQ+E++ FS G + C+++ K TGE
Sbjct: 98 SQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGNIVDCEIVTWKETGE 147
>gi|193204854|ref|NP_001122632.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
gi|151936119|gb|ABS18836.1| ELAV-type RNA binding protein variant E [Caenorhabditis elegans]
gi|351063348|emb|CCD71503.1| Protein ETR-1, isoform g [Caenorhabditis elegans]
Length = 513
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 108 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 58 EVESCKLIRDK 68
+E C ++RD+
Sbjct: 167 HIEDCSVLRDQ 177
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 15 SVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S + N S +PS ++ + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 36 STAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +Q S+ E + + L Q M + + S FS GEV S K+IR+K TG+
Sbjct: 72 SPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQ 123
>gi|374299435|ref|YP_005051074.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
gi|332552371|gb|EGJ49415.1| RNP-1 like RNA-binding protein [Desulfovibrio africanus str.
Walvis Bay]
Length = 100
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 35 LIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGEL 73
L V LP + ++++++ LFS+ GEV S LI D+ TG L
Sbjct: 5 LYVGNLPFSASEDDIRDLFSTYGEVNSVSLITDRETGRL 43
>gi|32482057|gb|AAP84375.1| mutant FCA-D1 [Triticum aestivum]
Length = 284
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 120 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 164
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
TN+ V + Q +T EE +SLF GE+ S L RD TG+
Sbjct: 239 TNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGK 278
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
+ S N+ NL V L T+T E+++ LF+ G + SCK++RD
Sbjct: 314 YEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD 362
>gi|151936115|gb|ABS18834.1| ELAV-type RNA binding protein variant C [Caenorhabditis elegans]
Length = 378
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 108 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 58 EVESCKLIRDK 68
+E C ++RD+
Sbjct: 167 HIEDCSVLRDQ 177
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 15 SVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S + N S +PS ++ + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 36 STAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>gi|32482149|gb|AAP84420.1| FCA-D1 [Triticum aestivum]
Length = 659
Score = 38.5 bits (88), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ L V +P+T +++++ LF G+V LIRD+ TGE
Sbjct: 34 NKSGYVKLFVGSVPRTANEDDVRPLFEDHGDVLEVALIRDRKTGE 78
>gi|17532857|ref|NP_493673.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
gi|1289522|gb|AAA98566.1| elav-type ribonucleoprotein [Caenorhabditis elegans]
gi|151936111|gb|ABS18832.1| ELAV-type RNA binding protein variant A [Caenorhabditis elegans]
gi|351063336|emb|CCD71491.1| Protein ETR-1, isoform a [Caenorhabditis elegans]
Length = 584
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 2 DAMPQQNGSLHNSSV--NSHNSASQTPSNEESKT--NLIVNYLPQTMTQEEMKSLFSSVG 57
DA+ Q G+LHN V H+ P++ E++ L + L + +E ++ +F+ G
Sbjct: 108 DAIEAQ-GALHNIKVIEGMHHPVQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFG 166
Query: 58 EVESCKLIRDK 68
+E C ++RD+
Sbjct: 167 HIEDCSVLRDQ 177
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 15 SVNSHNSASQTPSNEESKT-NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
S + N S +PS ++ + V +P+ + + + LF G V SC ++RDK+T
Sbjct: 36 STAADNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKST 92
>gi|330801309|ref|XP_003288671.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
gi|325081293|gb|EGC34814.1| hypothetical protein DICPUDRAFT_152921 [Dictyostelium purpureum]
Length = 348
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 22/37 (59%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
+L + YLP T EE+K LFS G V S K+ DK T
Sbjct: 268 DLFIYYLPFTYGDEELKQLFSPYGNVVSSKVFIDKNT 304
>gi|432107294|gb|ELK32708.1| RNA-binding protein 45 [Myotis davidii]
Length = 474
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 18 SHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +S + +E T + V +P++ T+E+++ F G++E C +I++K TGE
Sbjct: 106 SRSSGNHRDVEDEELTRIFV-MIPKSYTEEDLREKFKVYGDIEYCSIIKNKMTGE 159
>gi|225706204|gb|ACO08948.1| RNA-binding motif, single-stranded-interacting protein 1 [Osmerus
mordax]
Length = 377
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 10 SLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
+L +S V + + Q E+ TNL ++ LP +M ++E++++ G+V S +++RD
Sbjct: 112 ALKSSGVQAQMAKQQ----EQDPTNLYISNLPLSMDEQELEAMLKPFGQVISTRVLRDSN 167
Query: 70 TGELSVVANSIFAPE 84
G V + +PE
Sbjct: 168 GGSRGVGFARMESPE 182
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 19 HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRD 67
+ S N+ NL V L T+T E+++ LF+ G + SCK++RD
Sbjct: 314 YEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRD 362
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 21 SASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
S +Q S+ E + + L Q M + + S FS GEV S K+IR+K TG+
Sbjct: 72 SPTQIQSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQ 123
>gi|198437014|ref|XP_002120739.1| PREDICTED: similar to paraspeckle component 1 [Ciona intestinalis]
Length = 531
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 10 SLHNSSVNSHNSASQTPSNEE--SKTNLIVNYLPQTMTQEEMKSLFSSVGEV 59
S N S +SH +AS P+ + ++ L + LP ++T+EE K+LF GEV
Sbjct: 96 SSRNESNDSHQNASNRPTERKFTQRSRLFIGNLPTSITEEEFKNLFRPFGEV 147
>gi|403221237|dbj|BAM39370.1| uncharacterized protein TOT_010000827 [Theileria orientalis
strain Shintoku]
Length = 326
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 12 HNSSVNS-------HNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
+NSSV S H+ AS N+ + L +T T E+++S F S G+V ++
Sbjct: 28 YNSSVKSSNPGSGNHDPASLLSENDYESNKIFAGGLCRTTTAEQLRSYFESFGKVTETEV 87
Query: 65 IRDKTTG 71
++DK TG
Sbjct: 88 VKDKITG 94
>gi|340386096|ref|XP_003391544.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like, partial [Amphimedon queenslandica]
Length = 132
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 29 EESKTNLI-VNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
EE K I ++++P + EMKS F+ GEV + KLIR K TG
Sbjct: 27 EELKPGAIYLSHIPHGFYEREMKSYFTQFGEVTNLKLIRSKRTG 70
>gi|288942469|ref|YP_003444709.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288897841|gb|ADC63677.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 94
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 34 NLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
N+ V L ++TQ++++ F + G VES LI DK TG+
Sbjct: 2 NIYVGNLAYSVTQDDLREAFGAYGNVESANLITDKFTGD 40
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.305 0.118 0.311
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,347,495,431
Number of Sequences: 23463169
Number of extensions: 43538770
Number of successful extensions: 162735
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2458
Number of HSP's successfully gapped in prelim test: 551
Number of HSP's that attempted gapping in prelim test: 158592
Number of HSP's gapped (non-prelim): 4697
length of query: 100
length of database: 8,064,228,071
effective HSP length: 69
effective length of query: 31
effective length of database: 6,445,269,410
effective search space: 199803351710
effective search space used: 199803351710
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 69 (31.2 bits)