Your job contains 1 sequence.
>psy13318
MDAMPQQNGSLHNSSVNSHNSASQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVE
SCKLIRDKTTGELSVVANSIFAPELNGLHSQTERSRKSMF
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13318
(100 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0086675 - symbol:fne "found in neurons" species:72... 208 1.5e-16 1
ZFIN|ZDB-GENE-980526-76 - symbol:elavl3 "ELAV (embryonic ... 189 8.8e-16 2
UNIPROTKB|F1SNK9 - symbol:ELAVL2 "Uncharacterized protein... 192 1.0e-15 2
UNIPROTKB|B1AM48 - symbol:ELAVL2 "ELAV-like protein 2" sp... 194 2.0e-15 1
MGI|MGI:109157 - symbol:Elavl3 "ELAV (embryonic lethal, a... 183 4.9e-15 2
RGD|628892 - symbol:Elavl3 "ELAV (embryonic lethal, abnor... 183 4.9e-15 2
UNIPROTKB|F1PVV1 - symbol:ELAVL3 "Uncharacterized protein... 183 4.9e-15 2
UNIPROTKB|Q14576 - symbol:ELAVL3 "ELAV-like protein 3" sp... 183 4.9e-15 2
UNIPROTKB|F1SA16 - symbol:ELAVL3 "Uncharacterized protein... 183 4.9e-15 2
UNIPROTKB|F1N4V6 - symbol:ELAVL3 "Uncharacterized protein... 183 5.0e-15 2
UNIPROTKB|D4A7H6 - symbol:Elavl2 "ELAV-like protein 2" sp... 194 5.1e-15 1
UNIPROTKB|Q12926 - symbol:ELAVL2 "ELAV-like protein 2" sp... 194 5.9e-15 1
UNIPROTKB|E1C240 - symbol:ELAVL2 "Uncharacterized protein... 195 5.9e-15 1
MGI|MGI:1100887 - symbol:Elavl2 "ELAV (embryonic lethal, ... 194 5.9e-15 1
ZFIN|ZDB-GENE-990415-246 - symbol:elavl4 "ELAV (embryonic... 195 6.9e-15 1
UNIPROTKB|B1AM49 - symbol:ELAVL2 "ELAV-like protein 2" sp... 194 7.6e-15 1
UNIPROTKB|G3N063 - symbol:ELAVL2 "Uncharacterized protein... 194 7.7e-15 1
UNIPROTKB|E2RI94 - symbol:ELAVL2 "Uncharacterized protein... 194 7.7e-15 1
ZFIN|ZDB-GENE-040704-9 - symbol:elavl2 "ELAV (embryonic l... 194 7.7e-15 1
RGD|628611 - symbol:Elavl2 "ELAV (embryonic lethal, abnor... 187 3.5e-14 1
UNIPROTKB|Q8CH84 - symbol:Elavl2 "ELAV-like protein 2" sp... 187 3.5e-14 1
UNIPROTKB|D4AAT0 - symbol:Elavl4 "ELAV-like protein 4" sp... 186 4.2e-14 1
UNIPROTKB|Q91903 - symbol:elavl2 "ELAV-like protein 2" sp... 187 4.6e-14 1
UNIPROTKB|A2VDK5 - symbol:ELAVL4 "Uncharacterized protein... 186 4.9e-14 1
UNIPROTKB|J9PAL3 - symbol:ELAVL4 "Uncharacterized protein... 186 4.9e-14 1
UNIPROTKB|F1NLH0 - symbol:ELAVL4 "Uncharacterized protein... 186 5.1e-14 1
UNIPROTKB|B1APY9 - symbol:ELAVL4 "cDNA FLJ50619, highly s... 186 5.1e-14 1
RGD|1560027 - symbol:Elavl4 "ELAV (embryonic lethal, abno... 186 5.2e-14 1
UNIPROTKB|O09032 - symbol:Elavl4 "ELAV-like protein 4" sp... 186 5.2e-14 1
UNIPROTKB|P26378 - symbol:ELAVL4 "ELAV-like protein 4" sp... 186 5.5e-14 1
UNIPROTKB|F1LRX3 - symbol:Elavl4 "ELAV-like protein 4" sp... 186 5.5e-14 1
UNIPROTKB|F1P856 - symbol:ELAVL4 "Uncharacterized protein... 186 5.6e-14 1
UNIPROTKB|F1LRL1 - symbol:Elavl4 "ELAV-like protein 4" sp... 186 5.7e-14 1
UNIPROTKB|B1APY8 - symbol:ELAVL4 "ELAV-like protein 4" sp... 186 5.7e-14 1
MGI|MGI:107427 - symbol:Elavl4 "ELAV (embryonic lethal, a... 186 5.7e-14 1
UNIPROTKB|K7EPB5 - symbol:ELAVL3 "ELAV-like protein 3" sp... 179 7.9e-14 1
WB|WBGene00001368 - symbol:exc-7 species:6239 "Caenorhabd... 186 8.8e-14 1
FB|FBgn0010263 - symbol:Rbp9 "RNA-binding protein 9" spec... 177 7.9e-13 1
ZFIN|ZDB-GENE-990415-245 - symbol:elavl1 "ELAV (embryonic... 169 3.0e-12 1
MGI|MGI:1100851 - symbol:Elavl1 "ELAV (embryonic lethal, ... 167 4.4e-12 1
RGD|1308649 - symbol:Elavl1 "ELAV (embryonic lethal, abno... 167 4.4e-12 1
UNIPROTKB|D3K5N7 - symbol:ELAVL1 "ELAV (Embryonic lethal,... 166 5.7e-12 1
ZFIN|ZDB-GENE-000210-17 - symbol:hug "HuG" species:7955 "... 167 6.3e-12 1
UNIPROTKB|Q15717 - symbol:ELAVL1 "ELAV-like protein 1" sp... 164 9.5e-12 1
UNIPROTKB|F1N9I5 - symbol:ELAVL1 "Uncharacterized protein... 164 9.5e-12 1
UNIPROTKB|Q3ZCE2 - symbol:ELAVL1 "ELAV (Embryonic lethal,... 164 9.5e-12 1
UNIPROTKB|Q5U259 - symbol:elavl1-b "ELAV-like protein 1-B... 164 9.5e-12 1
UNIPROTKB|Q6GLB5 - symbol:elavl1 "ELAV-like protein 1" sp... 164 9.5e-12 1
UNIPROTKB|F1PSC4 - symbol:ELAVL1 "Uncharacterized protein... 164 1.0e-11 1
UNIPROTKB|Q1JQ73 - symbol:elavl1-a "ELAV-like protein 1-A... 164 1.1e-11 1
UNIPROTKB|B4DVB8 - symbol:ELAVL1 "ELAV-like protein 1" sp... 164 1.2e-11 1
FB|FBgn0260400 - symbol:elav "embryonic lethal abnormal v... 166 1.5e-11 1
FB|FBgn0038345 - symbol:CG5213 species:7227 "Drosophila m... 126 7.9e-08 1
FB|FBgn0264270 - symbol:Sxl "Sex lethal" species:7227 "Dr... 126 1.8e-07 1
FB|FBgn0024987 - symbol:ssx "sister-of-Sex-lethal" specie... 126 3.1e-07 1
DICTYBASE|DDB_G0290307 - symbol:DDB_G0290307 "ELAVL1-like... 115 4.4e-06 1
DICTYBASE|DDB_G0292472 - symbol:DDB_G0292472 species:4468... 112 1.2e-05 1
TAIR|locus:2176222 - symbol:AT5G51300 species:3702 "Arabi... 104 0.00014 1
DICTYBASE|DDB_G0291486 - symbol:DDB_G0291486 "putative sp... 99 0.00025 1
UNIPROTKB|F1NEX8 - symbol:RBM45 "Uncharacterized protein"... 98 0.00034 1
RGD|1304813 - symbol:Rbms2 "RNA binding motif, single str... 84 0.00037 2
UNIPROTKB|H0YCP8 - symbol:PUF60 "Poly(U)-binding-splicing... 92 0.00058 1
MGI|MGI:1861776 - symbol:Rbms2 "RNA binding motif, single... 80 0.00080 2
>FB|FBgn0086675 [details] [associations]
symbol:fne "found in neurons" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0051252 "regulation of
RNA metabolic process" evidence=IMP] [GO:0008266 "poly(U) RNA
binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008049 "male courtship behavior" evidence=IMP]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 eggNOG:COG0724
TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 KO:K13208
OMA:SNSRNCP HSSP:Q60900 GO:GO:0051252 EMBL:AF239667 EMBL:BT120384
RefSeq:NP_001096965.1 RefSeq:NP_001245646.1 RefSeq:NP_001245648.1
RefSeq:NP_001245649.1 RefSeq:NP_572842.1 UniGene:Dm.3314 SMR:Q9VYI0
IntAct:Q9VYI0 MINT:MINT-1646975 STRING:Q9VYI0
EnsemblMetazoa:FBtr0073712 EnsemblMetazoa:FBtr0113493
EnsemblMetazoa:FBtr0306738 EnsemblMetazoa:FBtr0308694
EnsemblMetazoa:FBtr0308695 EnsemblMetazoa:FBtr0333319
EnsemblMetazoa:FBtr0333320 GeneID:32245 KEGG:dme:Dmel_CG4396
UCSC:CG4396-RA CTD:32245 FlyBase:FBgn0086675 InParanoid:Q9VYI0
OrthoDB:EOG44B8HT GenomeRNAi:32245 NextBio:777561 Uniprot:Q9VYI0
Length = 356
Score = 208 (78.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 39/52 (75%), Positives = 48/52 (92%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVAN 78
SN+ES+TNLIVNYLPQTMTQEEM+SLFSS+GE+ESCKL+RDK +G L + A+
Sbjct: 20 SNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPAS 71
>ZFIN|ZDB-GENE-980526-76 [details] [associations]
symbol:elavl3 "ELAV (embryonic lethal, abnormal
vision, Drosophila)-like 3 (Hu antigen C)" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-980526-76 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 HSSP:P19339 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:ARRYTGP OrthoDB:EOG43R3N0
EMBL:CR385086 EMBL:BC065343 IPI:IPI00512421 UniGene:Dr.75060
SMR:Q6P105 STRING:Q6P105 Ensembl:ENSDART00000028610
InParanoid:Q6P105 Uniprot:Q6P105
Length = 359
Score = 189 (71.6 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE KSLF S+GE+ESCKL+RDK TG+
Sbjct: 32 ATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQ 77
Score = 88 (36.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELS 74
PS+ + NL V+ LP+TM+Q++M+ LFS G + + +++ D+ T +S
Sbjct: 116 PSSASIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGIS 165
Score = 31 (16.0 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|F1SNK9 [details] [associations]
symbol:ELAVL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AEMK01195641
EMBL:CU407236 Ensembl:ENSSSCT00000005656 Uniprot:F1SNK9
Length = 400
Score = 192 (72.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 35/45 (77%), Positives = 41/45 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG
Sbjct: 43 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITG 87
Score = 94 (38.1 bits), Expect = 0.00066, P = 0.00066
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 157 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 203
Score = 30 (15.6 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 85 LNGLHSQTERSRKS 98
LNGL QT+ + S
Sbjct: 140 LNGLRLQTKTIKVS 153
>UNIPROTKB|B1AM48 [details] [associations]
symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623 UniGene:Hs.166109
HGNC:HGNC:3313 OrthoDB:EOG4JHCFV IPI:IPI00184721 SMR:B1AM48
Ensembl:ENST00000440102 Uniprot:B1AM48
Length = 189
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00015, P = 0.00015
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>MGI|MGI:109157 [details] [associations]
symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 3 (Hu antigen C)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0017091
"AU-rich element binding" evidence=ISO;IDA] [GO:0030154 "cell
differentiation" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
MGI:MGI:109157 GO:GO:0007399 GO:GO:0030154 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OMA:ARRYTGP
ChiTaRS:ELAVL3 EMBL:U29148 EMBL:U29149 EMBL:BC052097
IPI:IPI00122451 IPI:IPI00222990 RefSeq:NP_034617.1
UniGene:Mm.390167 PDB:1D8Z PDB:1D9A PDB:1FNX PDBsum:1D8Z
PDBsum:1D9A PDBsum:1FNX ProteinModelPortal:Q60900 SMR:Q60900
STRING:Q60900 PhosphoSite:Q60900 PaxDb:Q60900 PRIDE:Q60900
Ensembl:ENSMUST00000003501 GeneID:15571 KEGG:mmu:15571
UCSC:uc009onl.2 UCSC:uc009onn.1 InParanoid:Q60900 OrthoDB:EOG43R3N0
EvolutionaryTrace:Q60900 NextBio:288556 Bgee:Q60900
Genevestigator:Q60900 GermOnline:ENSMUSG00000003410 Uniprot:Q60900
Length = 367
Score = 183 (69.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 163
Score = 31 (16.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>RGD|628892 [details] [associations]
symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 3 (Hu antigen C)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA;ISO]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:628892 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 HSSP:P19339 eggNOG:COG0724 EMBL:CH473993
HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OrthoDB:EOG43R3N0
EMBL:AB097198 IPI:IPI00192527 RefSeq:NP_758827.1 UniGene:Rn.22586
SMR:Q76IJ9 STRING:Q76IJ9 Ensembl:ENSRNOT00000018416 GeneID:282824
KEGG:rno:282824 UCSC:RGD:628892 InParanoid:Q76IJ9 NextBio:624869
Genevestigator:Q76IJ9 Uniprot:Q76IJ9
Length = 367
Score = 183 (69.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATG 163
Score = 31 (16.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|F1PVV1 [details] [associations]
symbol:ELAVL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:AAEX03012413
Ensembl:ENSCAFT00000027494 Uniprot:F1PVV1
Length = 367
Score = 183 (69.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 93 (37.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
Score = 31 (16.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|Q14576 [details] [associations]
symbol:ELAVL3 "ELAV-like protein 3" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0017091 "AU-rich element
binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0007399 GO:GO:0030154
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
KO:K13208 EMBL:L26405 EMBL:AY036909 EMBL:AC008481 EMBL:BC014144
EMBL:D26158 IPI:IPI00031552 IPI:IPI00140449 RefSeq:NP_001411.2
RefSeq:NP_115657.2 UniGene:Hs.1701 ProteinModelPortal:Q14576
SMR:Q14576 IntAct:Q14576 MINT:MINT-1471958 STRING:Q14576
PhosphoSite:Q14576 DMDM:21264436 PaxDb:Q14576 PRIDE:Q14576
Ensembl:ENST00000359227 Ensembl:ENST00000438662 GeneID:1995
KEGG:hsa:1995 UCSC:uc002mrx.1 UCSC:uc002mry.1 CTD:1995
GeneCards:GC19M011562 HGNC:HGNC:3314 HPA:CAB013066 MIM:603458
neXtProt:NX_Q14576 PharmGKB:PA27742 InParanoid:Q14576 OMA:ARRYTGP
PhylomeDB:Q14576 ChiTaRS:ELAVL3 GenomeRNAi:1995 NextBio:8067
ArrayExpress:Q14576 Bgee:Q14576 CleanEx:HS_ELAVL3
Genevestigator:Q14576 GermOnline:ENSG00000196361 Uniprot:Q14576
Length = 367
Score = 183 (69.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 93 (37.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
Score = 31 (16.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|F1SA16 [details] [associations]
symbol:ELAVL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017091 "AU-rich element binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:CU855518
Ensembl:ENSSSCT00000014872 Uniprot:F1SA16
Length = 367
Score = 183 (69.5 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 93 (37.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
Score = 31 (16.0 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|F1N4V6 [details] [associations]
symbol:ELAVL3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:DAAA02019487
IPI:IPI00710891 Ensembl:ENSBTAT00000019169 Uniprot:F1N4V6
Length = 368
Score = 183 (69.5 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 32/46 (69%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQ 78
Score = 93 (37.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TM+Q+EM+ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTG 163
Score = 31 (16.0 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 88 LHSQTERSR 96
LH QT+R R
Sbjct: 230 LHHQTQRFR 238
>UNIPROTKB|D4A7H6 [details] [associations]
symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01661 IPI:IPI00192584 ProteinModelPortal:D4A7H6
SMR:D4A7H6 Ensembl:ENSRNOT00000009035 ArrayExpress:D4A7H6
Uniprot:D4A7H6
Length = 346
Score = 194 (73.4 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00053, P = 0.00053
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|Q12926 [details] [associations]
symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003730 "mRNA 3'-UTR binding"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0006355 GO:GO:0000166
Gene3D:3.30.70.330 EMBL:CH471071 GO:GO:0003730 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
EMBL:U12431 EMBL:U29943 EMBL:AB209294 EMBL:AL161628 EMBL:AL445623
EMBL:BC030692 IPI:IPI00030250 IPI:IPI00219967 PIR:I38726 PIR:I39077
RefSeq:NP_001164666.1 RefSeq:NP_001164668.1 RefSeq:NP_004423.2
UniGene:Hs.166109 ProteinModelPortal:Q12926 SMR:Q12926
STRING:Q12926 PhosphoSite:Q12926 DMDM:93141258 PaxDb:Q12926
PRIDE:Q12926 DNASU:1993 Ensembl:ENST00000223951
Ensembl:ENST00000380110 Ensembl:ENST00000380117
Ensembl:ENST00000397312 Ensembl:ENST00000544538 GeneID:1993
KEGG:hsa:1993 UCSC:uc003zps.3 UCSC:uc003zpu.3 CTD:1993
GeneCards:GC09M023690 HGNC:HGNC:3313 HPA:CAB022222 MIM:601673
neXtProt:NX_Q12926 PharmGKB:PA27741 InParanoid:Q12926 KO:K13208
OrthoDB:EOG4JHCFV PhylomeDB:Q12926 GenomeRNAi:1993 NextBio:8059
ArrayExpress:Q12926 Bgee:Q12926 CleanEx:HS_ELAVL2
Genevestigator:Q12926 GermOnline:ENSG00000107105 Uniprot:Q12926
Length = 359
Score = 194 (73.4 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|E1C240 [details] [associations]
symbol:ELAVL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AADN02057847
EMBL:AADN02057848 EMBL:AADN02057849 EMBL:AADN02057850
IPI:IPI00584568 ProteinModelPortal:E1C240
Ensembl:ENSGALT00000025475 Uniprot:E1C240
Length = 388
Score = 195 (73.7 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 35/46 (76%), Positives = 43/46 (93%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ+MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 61 NTEDSKTNLIVNYLPQSMTQEELKSLFGSIGEIESCKLVRDKITGQ 106
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 145 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>MGI|MGI:1100887 [details] [associations]
symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1100887 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 CTD:1993 KO:K13208 EMBL:U29088
IPI:IPI00121676 PIR:JC6057 RefSeq:NP_034616.1 UniGene:Mm.318042
ProteinModelPortal:Q60899 SMR:Q60899 STRING:Q60899
PhosphoSite:Q60899 PaxDb:Q60899 PRIDE:Q60899
Ensembl:ENSMUST00000008633 GeneID:15569 KEGG:mmu:15569
InParanoid:Q60899 NextBio:288546 Bgee:Q60899 Genevestigator:Q60899
GermOnline:ENSMUSG00000008489 Uniprot:Q60899
Length = 360
Score = 194 (73.4 bits), Expect = 5.9e-15, P = 5.9e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>ZFIN|ZDB-GENE-990415-246 [details] [associations]
symbol:elavl4 "ELAV (embryonic lethal, abnormal
vision, Drosophila)-like 4 (Hu antigen D)" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-990415-246 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 EMBL:CR931780 EMBL:CU467068
EMBL:CU929301 IPI:IPI00920316 ProteinModelPortal:F1R133
Ensembl:ENSDART00000134787 ArrayExpress:F1R133 Bgee:F1R133
Uniprot:F1R133
Length = 408
Score = 195 (73.7 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
SN++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 82 SNDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 127
Score = 94 (38.1 bits), Expect = 0.00068, P = 0.00068
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 166 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 212
>UNIPROTKB|B1AM49 [details] [associations]
symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623
UniGene:Hs.166109 HGNC:HGNC:3313 OMA:RAVENGP SMR:B1AM49
Ensembl:ENST00000359598 Uniprot:B1AM49
Length = 387
Score = 194 (73.4 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 61 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 106
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 145 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>UNIPROTKB|G3N063 [details] [associations]
symbol:ELAVL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:DAAA02022184
EMBL:DAAA02022185 Ensembl:ENSBTAT00000065940 Uniprot:G3N063
Length = 388
Score = 194 (73.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 107
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 146 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>UNIPROTKB|E2RI94 [details] [associations]
symbol:ELAVL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AAEX03007909
EMBL:AAEX03007910 EMBL:AAEX03007911 EMBL:AAEX03007912
Ensembl:ENSCAFT00000002645 Uniprot:E2RI94
Length = 388
Score = 194 (73.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 35/46 (76%), Positives = 42/46 (91%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 62 NTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 107
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 146 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 192
>ZFIN|ZDB-GENE-040704-9 [details] [associations]
symbol:elavl2 "ELAV (embryonic lethal, abnormal
vision, Drosophila)-like 2 (Hu antigen B)" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-040704-9 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OrthoDB:EOG4JHCFV EMBL:AL954145
IPI:IPI00482002 UniGene:Dr.84858 SMR:Q1MT19
Ensembl:ENSDART00000139420 InParanoid:Q1MT19 Uniprot:Q1MT19
Length = 388
Score = 194 (73.4 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 35/45 (77%), Positives = 42/45 (93%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 63 SEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 107
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 146 PSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTG 192
>RGD|628611 [details] [associations]
symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 2 (Hu antigen B)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
ArrayExpress:Q8CH84 Genevestigator:Q8CH84
GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
Length = 359
Score = 187 (70.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLI NYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|Q8CH84 [details] [associations]
symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
ArrayExpress:Q8CH84 Genevestigator:Q8CH84
GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
Length = 359
Score = 187 (70.9 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 34/46 (73%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ E+SKTNLI NYLPQ MTQEE+KSLF S+GE+ESCKL+RDK TG+
Sbjct: 33 NTEDSKTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00056, P = 0.00056
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|D4AAT0 [details] [associations]
symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
TIGRFAMs:TIGR01661 IPI:IPI00392493 ProteinModelPortal:D4AAT0
Ensembl:ENSRNOT00000035262 ArrayExpress:D4AAT0 Uniprot:D4AAT0
Length = 351
Score = 186 (70.5 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 38 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 83
Score = 94 (38.1 bits), Expect = 0.00054, P = 0.00054
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 122 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 168
>UNIPROTKB|Q91903 [details] [associations]
symbol:elavl2 "ELAV-like protein 2" species:8355 "Xenopus
laevis" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008298 "intracellular mRNA
localization" evidence=IMP] [GO:0017131 "uridine-rich cytoplasmic
polyadenylylation element binding" evidence=IDA] [GO:0030529
"ribonucleoprotein complex" evidence=IDA;IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IDA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0005938 GO:GO:0007399 GO:GO:0000166
GO:GO:0051260 Gene3D:3.30.70.330 GO:GO:0000122 GO:GO:0003730
GO:GO:0030529 GO:GO:0008298 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
HSSP:P26378 KO:K13208 EMBL:X85111 EMBL:U17597 EMBL:BC170539
EMBL:BC094189 PIR:I51676 RefSeq:NP_001081035.1
RefSeq:NP_001081613.1 UniGene:Xl.1648 UniGene:Xl.34955
ProteinModelPortal:Q91903 SMR:Q91903 MINT:MINT-2880431
GeneID:394342 GeneID:397952 KEGG:xla:394342 KEGG:xla:397952
CTD:394342 CTD:397952 Xenbase:XB-GENE-6254447
Xenbase:XB-GENE-866091 GO:GO:0017131 Uniprot:Q91903
Length = 389
Score = 187 (70.9 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 34/47 (72%), Positives = 42/47 (89%)
Query: 24 QTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTT 70
++ + E+SKTNLIVNYLPQ MTQEE+KSLF S+GE+ESCKL+RDK T
Sbjct: 57 ESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 103
Score = 94 (38.1 bits), Expect = 0.00063, P = 0.00063
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 145 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 191
>UNIPROTKB|A2VDK5 [details] [associations]
symbol:ELAVL4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
OMA:SNSRNCP EMBL:DAAA02008922 EMBL:DAAA02008923 EMBL:BC133283
IPI:IPI00729244 RefSeq:NP_001075075.1 UniGene:Bt.26853 SMR:A2VDK5
STRING:A2VDK5 Ensembl:ENSBTAT00000028031 GeneID:535408
KEGG:bta:535408 InParanoid:A2VDK5 NextBio:20876736 Uniprot:A2VDK5
Length = 366
Score = 186 (70.5 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 85
Score = 94 (38.1 bits), Expect = 0.00058, P = 0.00058
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 124 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>UNIPROTKB|J9PAL3 [details] [associations]
symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 CTD:1996 EMBL:AAEX03009733
RefSeq:XP_859918.1 ProteinModelPortal:J9PAL3
Ensembl:ENSCAFT00000045412 GeneID:475361 KEGG:cfa:475361
Uniprot:J9PAL3
Length = 366
Score = 186 (70.5 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 85
Score = 94 (38.1 bits), Expect = 0.00058, P = 0.00058
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 124 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>UNIPROTKB|F1NLH0 [details] [associations]
symbol:ELAVL4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:SNSRNCP
EMBL:AADN02012596 IPI:IPI00594347 ProteinModelPortal:F1NLH0
Ensembl:ENSGALT00000017146 Uniprot:F1NLH0
Length = 371
Score = 186 (70.5 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 90
Score = 94 (38.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 129 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>UNIPROTKB|B1APY9 [details] [associations]
symbol:ELAVL4 "cDNA FLJ50619, highly similar to ELAV-like
protein 4" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
UniGene:Hs.213050 HGNC:HGNC:3315 EMBL:AK298902 IPI:IPI00643012
SMR:B1APY9 STRING:B1APY9 Ensembl:ENST00000371819 UCSC:uc009vyu.3
Uniprot:B1APY9
Length = 371
Score = 186 (70.5 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 45 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 90
Score = 94 (38.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 129 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>RGD|1560027 [details] [associations]
symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017091 "AU-rich element
binding" evidence=IEA;ISO;ISS] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996 OMA:SNSRNCP
EMBL:S83320 IPI:IPI00560167 RefSeq:NP_001071119.1 UniGene:Rn.134702
ProteinModelPortal:O09032 SMR:O09032 STRING:O09032
PhosphoSite:O09032 GeneID:432358 KEGG:rno:432358 UCSC:RGD:1560027
InParanoid:O09032 NextBio:696819 ArrayExpress:O09032
Genevestigator:O09032 GermOnline:ENSRNOG00000023601 Uniprot:O09032
Length = 373
Score = 186 (70.5 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|O09032 [details] [associations]
symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV
CTD:1996 OMA:SNSRNCP EMBL:S83320 IPI:IPI00560167
RefSeq:NP_001071119.1 UniGene:Rn.134702 ProteinModelPortal:O09032
SMR:O09032 STRING:O09032 PhosphoSite:O09032 GeneID:432358
KEGG:rno:432358 UCSC:RGD:1560027 InParanoid:O09032 NextBio:696819
ArrayExpress:O09032 Genevestigator:O09032
GermOnline:ENSRNOG00000023601 Uniprot:O09032
Length = 373
Score = 186 (70.5 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 78
Score = 94 (38.1 bits), Expect = 0.00059, P = 0.00059
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 117 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 163
>UNIPROTKB|P26378 [details] [associations]
symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 EMBL:CH471059
GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0003730
eggNOG:COG0724 EMBL:AL645730 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 EMBL:M62843
EMBL:AY033995 EMBL:AY033996 EMBL:AY033997 EMBL:AY033998
EMBL:AK297338 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
EMBL:BC036071 IPI:IPI00395507 IPI:IPI00479625 IPI:IPI00607677
IPI:IPI00644588 IPI:IPI00978372 PIR:A40348 RefSeq:NP_001138246.1
RefSeq:NP_001138247.1 RefSeq:NP_001138248.1 RefSeq:NP_001138249.1
RefSeq:NP_068771.2 UniGene:Hs.213050 PDB:1FXL PDB:1G2E PDBsum:1FXL
PDBsum:1G2E ProteinModelPortal:P26378 SMR:P26378 IntAct:P26378
MINT:MINT-1471928 STRING:P26378 PhosphoSite:P26378 DMDM:223590202
PaxDb:P26378 PRIDE:P26378 Ensembl:ENST00000357083
Ensembl:ENST00000371823 Ensembl:ENST00000371824
Ensembl:ENST00000371827 Ensembl:ENST00000448907 GeneID:1996
KEGG:hsa:1996 UCSC:uc001crz.3 UCSC:uc001csa.3 UCSC:uc001csb.2
UCSC:uc001csc.3 CTD:1996 GeneCards:GC01P050513 HGNC:HGNC:3315
HPA:CAB004442 MIM:168360 neXtProt:NX_P26378 PharmGKB:PA27743
EvolutionaryTrace:P26378 GenomeRNAi:1996 NextBio:8073
ArrayExpress:P26378 Bgee:P26378 CleanEx:HS_ELAVL4
Genevestigator:P26378 GermOnline:ENSG00000162374 Uniprot:P26378
Length = 380
Score = 186 (70.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 40 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 85
Score = 94 (38.1 bits), Expect = 0.00061, P = 0.00061
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 124 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>UNIPROTKB|F1LRX3 [details] [associations]
symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 TIGRFAMs:TIGR01661 IPI:IPI00808644
Ensembl:ENSRNOT00000067007 ArrayExpress:F1LRX3 Uniprot:F1LRX3
Length = 380
Score = 186 (70.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 40 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 85
Score = 94 (38.1 bits), Expect = 0.00061, P = 0.00061
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 124 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 170
>UNIPROTKB|F1P856 [details] [associations]
symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:SNSRNCP EMBL:AAEX03009733
Ensembl:ENSCAFT00000006315 Uniprot:F1P856
Length = 382
Score = 186 (70.5 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 56 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 101
Score = 94 (38.1 bits), Expect = 0.00061, P = 0.00061
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 140 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 186
>UNIPROTKB|F1LRL1 [details] [associations]
symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 TIGRFAMs:TIGR01661 IPI:IPI00763452
Ensembl:ENSRNOT00000064277 ArrayExpress:F1LRL1 Uniprot:F1LRL1
Length = 384
Score = 186 (70.5 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 44 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 89
Score = 94 (38.1 bits), Expect = 0.00062, P = 0.00062
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 128 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 174
>UNIPROTKB|B1APY8 [details] [associations]
symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AL583843 EMBL:AL592182
EMBL:AL731870 UniGene:Hs.213050 HGNC:HGNC:3315 OMA:SNSRNCP
IPI:IPI00513758 SMR:B1APY8 STRING:B1APY8 Ensembl:ENST00000371821
Uniprot:B1APY8
Length = 385
Score = 186 (70.5 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 45 TTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 90
Score = 94 (38.1 bits), Expect = 0.00062, P = 0.00062
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 129 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>MGI|MGI:107427 [details] [associations]
symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 4 (Hu antigen D)" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0017091 "AU-rich element binding" evidence=ISO]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 MGI:MGI:107427 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 eggNOG:COG0724 EMBL:AL627425 HOVERGEN:HBG002295
HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
EMBL:D31953 EMBL:AF041341 IPI:IPI00229977 IPI:IPI00466120
PIR:JC2298 RefSeq:NP_034618.2 UniGene:Mm.3970
ProteinModelPortal:Q61701 SMR:Q61701 STRING:Q61701
PhosphoSite:Q61701 PaxDb:Q61701 PRIDE:Q61701
Ensembl:ENSMUST00000106597 GeneID:15572 KEGG:mmu:15572
InParanoid:A2A9R7 OMA:SNSRNCP NextBio:288560 Bgee:Q61701
Genevestigator:Q61701 GermOnline:ENSMUSG00000028546 Uniprot:Q61701
Length = 385
Score = 186 (70.5 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+ ++SKTNLIVNYLPQ MTQEE +SLF S+GE+ESCKL+RDK TG+
Sbjct: 45 ATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQ 90
Score = 94 (38.1 bits), Expect = 0.00062, P = 0.00062
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+ + NL V+ LP+TMTQ+E++ LFS G + + +++ D+ TG
Sbjct: 129 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTG 175
>UNIPROTKB|K7EPB5 [details] [associations]
symbol:ELAVL3 "ELAV-like protein 3" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 SMART:SM00360 Gene3D:3.30.70.330
EMBL:AC008481 HGNC:HGNC:3314 Ensembl:ENST00000588853 Uniprot:K7EPB5
Length = 92
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 27 SNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVANSIFAPELN 86
+ ++SKTNLIVNYLPQ MTQ+E KSLF S+G++ESCKL+RDK T + N+ LN
Sbjct: 33 ATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITDK---AINT-----LN 84
Query: 87 GLHSQTE 93
GL QT+
Sbjct: 85 GLKLQTK 91
>WB|WBGene00001368 [details] [associations]
symbol:exc-7 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0035150 "regulation of tube size" evidence=IMP]
[GO:0016607 "nuclear speck" evidence=IDA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0003723
GO:GO:0002064 eggNOG:COG0724 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 HSSP:P26378 GeneTree:ENSGT00560000077064
OMA:DIGESKT GO:GO:0035150 EMBL:Z36752 PIR:T21822 RefSeq:NP_496057.1
ProteinModelPortal:Q20084 SMR:Q20084 DIP:DIP-27011N IntAct:Q20084
MINT:MINT-1038844 STRING:Q20084 PaxDb:Q20084 EnsemblMetazoa:F35H8.5
GeneID:174506 KEGG:cel:CELE_F35H8.5 CTD:174506 WormBase:F35H8.5
InParanoid:Q20084 NextBio:884320 Uniprot:Q20084
Length = 456
Score = 186 (70.5 bits), Expect = 8.8e-14, P = 8.8e-14
Identities = 33/43 (76%), Positives = 41/43 (95%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
ESKTNLI+NYLPQ MTQEE++SLF+S+GE+ESCKL+RDK TG+
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQ 81
>FB|FBgn0010263 [details] [associations]
symbol:Rbp9 "RNA-binding protein 9" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0007293
"germarium-derived egg chamber formation" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0048477
"oogenesis" evidence=IMP] [GO:0036093 "germ cell proliferation"
evidence=IMP] [GO:0060856 "establishment of blood-brain barrier"
evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0007293 TIGRFAMs:TIGR01661
HSSP:P26378 GO:GO:0060856 FlyBase:FBgn0010263 EMBL:S55886
ProteinModelPortal:Q26293 SMR:Q26293 STRING:Q26293 PRIDE:Q26293
InParanoid:Q26293 ArrayExpress:Q26293 Bgee:Q26293 Uniprot:Q26293
Length = 444
Score = 177 (67.4 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 35/47 (74%), Positives = 42/47 (89%)
Query: 27 SNE-ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+NE + KTNLIVNYLPQTM+Q+E++SLF S GEVESCKLIRDK TG+
Sbjct: 103 NNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQ 149
Score = 101 (40.6 bits), Expect = 0.00013, P = 0.00013
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
PS+E K NL V+ LP+ MTQ +++SLFS G++ + +++ D TGE
Sbjct: 188 PSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITGE 235
>ZFIN|ZDB-GENE-990415-245 [details] [associations]
symbol:elavl1 "ELAV (embryonic lethal, abnormal
vision, Drosophila)-like 1 (Hu antigen R)" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-990415-245 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 EMBL:BX649372 IPI:IPI00817195
PRIDE:F1QM02 Ensembl:ENSDART00000146123 ArrayExpress:F1QM02
Bgee:F1QM02 Uniprot:F1QM02
Length = 340
Score = 169 (64.5 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 32/42 (76%), Positives = 38/42 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+SKTNLIVNYLPQ M+Q+E++SLFSS+GEVES KLIRDK G
Sbjct: 31 DSKTNLIVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAG 72
>MGI|MGI:1100851 [details] [associations]
symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision)-like
1 (Hu antigen R)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006417 "regulation of translation" evidence=ISO] [GO:0017091
"AU-rich element binding" evidence=ISO] [GO:0019901 "protein kinase
binding" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
binding" evidence=ISO] [GO:0045727 "positive regulation of
translation" evidence=ISO;IMP;IDA] [GO:0048255 "mRNA stabilization"
evidence=ISO;IMP] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 MGI:MGI:1100851 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
GO:GO:0045727 EMBL:CH466566 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:U65735 EMBL:AK080365
EMBL:U17595 IPI:IPI00108271 PIR:I49144 RefSeq:NP_034615.2
UniGene:Mm.119162 HSSP:P26378 ProteinModelPortal:P70372 SMR:P70372
DIP:DIP-46480N MINT:MINT-4094207 STRING:P70372 PhosphoSite:P70372
PaxDb:P70372 PRIDE:P70372 Ensembl:ENSMUST00000098950 GeneID:15568
KEGG:mmu:15568 GeneTree:ENSGT00560000077064 InParanoid:P70372
OMA:YANRACA ChiTaRS:ELAVL1 NextBio:288542 Bgee:P70372
Genevestigator:P70372 GermOnline:ENSMUSG00000040028 Uniprot:P70372
Length = 326
Score = 167 (63.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 32/40 (80%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>RGD|1308649 [details] [associations]
symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision,
Drosophila)-like 1 (Hu antigen R)" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006417 "regulation of
translation" evidence=ISO] [GO:0017091 "AU-rich element binding"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
[GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=ISO]
[GO:0045727 "positive regulation of translation" evidence=IEA;ISO]
[GO:0048255 "mRNA stabilization" evidence=ISO] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=ISO]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:1308649 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003730 eggNOG:COG0724 HOVERGEN:HBG002295 CTD:1994
HOGENOM:HOG000231162 KO:K13088 OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:CH474084
EMBL:BC168972 EMBL:AB212679 IPI:IPI00869767 RefSeq:NP_001102318.1
UniGene:Rn.216517 SMR:B5DF91 STRING:B5DF91
Ensembl:ENSRNOT00000001415 GeneID:363854 KEGG:rno:363854
UCSC:RGD:1308649 NextBio:684342 Genevestigator:B5DF91
Uniprot:B5DF91
Length = 326
Score = 167 (63.8 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 32/40 (80%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQEE++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAG 58
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>UNIPROTKB|D3K5N7 [details] [associations]
symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
Drosophila)-like 1" species:9823 "Sus scrofa" [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0017091 "AU-rich element
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727
GO:GO:0070935 CTD:1994 KO:K13088 OrthoDB:EOG4Z8XWZ
TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
EMBL:CU929699 EMBL:GU373715 RefSeq:NP_001182263.1 UniGene:Ssc.4516
ProteinModelPortal:D3K5N7 Ensembl:ENSSSCT00000014844
GeneID:100337681 KEGG:ssc:100337681 Uniprot:D3K5N7
Length = 326
Score = 166 (63.5 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQEE++SLFSS+GE+ES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQEELRSLFSSIGEIESAKLIRDKVAG 58
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSPFGRIINSRVLVDQTTG 144
>ZFIN|ZDB-GENE-000210-17 [details] [associations]
symbol:hug "HuG" species:7955 "Danio rerio"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-000210-17 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 EMBL:CR550302 IPI:IPI00998450
ProteinModelPortal:F1QUX1 Ensembl:ENSDART00000122728
ArrayExpress:F1QUX1 Bgee:F1QUX1 Uniprot:F1QUX1
Length = 368
Score = 167 (63.8 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 31/42 (73%), Positives = 38/42 (90%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
++KTNLI+NYLPQ M+QEE++SLFSS+GEVES KLIRDK G
Sbjct: 53 DAKTNLIINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAG 94
>UNIPROTKB|Q15717 [details] [associations]
symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IDA;IMP] [GO:0048255
"mRNA stabilization" evidence=IDA;IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0017091
"AU-rich element binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0035925
"mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0007275 "multicellular organismal
development" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0007275 GO:GO:0005829 GO:GO:0010467 GO:GO:0016071
GO:GO:0005654 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
GO:GO:0017091 EMBL:CH471139 GO:GO:0045727 eggNOG:COG0724
GO:GO:0070935 HOVERGEN:HBG002295 EMBL:U38175 EMBL:BT009793
EMBL:BC003376 IPI:IPI00940851 RefSeq:NP_001410.2 UniGene:Hs.184492
UniGene:Hs.713744 PDB:3HI9 PDB:4ED5 PDB:4EGL PDB:4FXV PDBsum:3HI9
PDBsum:4ED5 PDBsum:4EGL PDBsum:4FXV ProteinModelPortal:Q15717
SMR:Q15717 IntAct:Q15717 MINT:MINT-5001300 STRING:Q15717
PhosphoSite:Q15717 DMDM:20981691 PaxDb:Q15717 PeptideAtlas:Q15717
PRIDE:Q15717 DNASU:1994 Ensembl:ENST00000407627 GeneID:1994
KEGG:hsa:1994 UCSC:uc002mjb.3 CTD:1994 GeneCards:GC19M008023
HGNC:HGNC:3312 HPA:CAB005256 MIM:603466 neXtProt:NX_Q15717
PharmGKB:PA27740 HOGENOM:HOG000231162 InParanoid:Q15717 KO:K13088
OrthoDB:EOG4Z8XWZ PhylomeDB:Q15717 BindingDB:Q15717
ChEMBL:CHEMBL1250379 EvolutionaryTrace:Q15717 GenomeRNAi:1994
NextBio:8063 ArrayExpress:Q15717 Bgee:Q15717 CleanEx:HS_ELAVL1
Genevestigator:Q15717 GermOnline:ENSG00000066044 TIGRFAMs:TIGR01661
Uniprot:Q15717
Length = 326
Score = 164 (62.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 97 (39.2 bits), Expect = 0.00023, P = 0.00023
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>UNIPROTKB|F1N9I5 [details] [associations]
symbol:ELAVL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0070935
"3'-UTR-mediated mRNA stabilization" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727 GO:GO:0070935
TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
EMBL:AADN02063542 IPI:IPI00590347 ProteinModelPortal:F1N9I5
Ensembl:ENSGALT00000001029 Uniprot:F1N9I5
Length = 326
Score = 164 (62.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 93 (37.8 bits), Expect = 0.00061, P = 0.00061
Identities = 18/47 (38%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP++MTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>UNIPROTKB|Q3ZCE2 [details] [associations]
symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
Drosophila)-like 1 (Hu antigen R)" species:9913 "Bos taurus"
[GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0017091
"AU-rich element binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0017091 GO:GO:0045727 eggNOG:COG0724 GO:GO:0070935
HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064
OMA:RFGGPLH EMBL:DAAA02019508 EMBL:DAAA02019509 EMBL:BC102495
IPI:IPI00703347 RefSeq:NP_001069922.1 UniGene:Bt.49576 SMR:Q3ZCE2
STRING:Q3ZCE2 Ensembl:ENSBTAT00000000805 GeneID:617316
KEGG:bta:617316 InParanoid:Q3ZCE2 NextBio:20900599 Uniprot:Q3ZCE2
Length = 326
Score = 164 (62.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
Score = 92 (37.4 bits), Expect = 0.00079, P = 0.00079
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+ MTQ++++ +FS G + + +++ D+TTG
Sbjct: 98 PSSEVIKDANLYISGLPRNMTQKDVEDMFSRFGRIINSRVLVDQTTG 144
>UNIPROTKB|Q5U259 [details] [associations]
symbol:elavl1-b "ELAV-like protein 1-B" species:8355
"Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007369
"gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA binding"
evidence=ISS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0051259 "protein
oligomerization" evidence=ISS] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 KO:K13088
TIGRFAMs:TIGR01661 EMBL:BC086269 RefSeq:NP_001088628.1
UniGene:Xl.22886 ProteinModelPortal:Q5U259 SMR:Q5U259 PRIDE:Q5U259
GeneID:495680 KEGG:xla:495680 CTD:495680 Xenbase:XB-GENE-865489
Uniprot:Q5U259
Length = 326
Score = 164 (62.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
>UNIPROTKB|Q6GLB5 [details] [associations]
symbol:elavl1 "ELAV-like protein 1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0003730 "mRNA 3'-UTR binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005938 "cell cortex" evidence=ISS]
[GO:0007369 "gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA
binding" evidence=ISS] [GO:0008298 "intracellular mRNA
localization" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
[GO:0051259 "protein oligomerization" evidence=ISS]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0005938 GO:GO:0005634 GO:GO:0008266
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
GO:GO:0030529 GO:GO:0008298 GO:GO:0007369 eggNOG:COG0724
HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:BC074585
RefSeq:NP_001005461.1 UniGene:Str.2596 ProteinModelPortal:Q6GLB5
SMR:Q6GLB5 STRING:Q6GLB5 PRIDE:Q6GLB5 GeneID:448062 KEGG:xtr:448062
Xenbase:XB-GENE-481800 InParanoid:Q6GLB5 Uniprot:Q6GLB5
Length = 326
Score = 164 (62.8 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
>UNIPROTKB|F1PSC4 [details] [associations]
symbol:ELAVL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:AAEX03012469
Ensembl:ENSCAFT00000029161 Uniprot:F1PSC4
Length = 334
Score = 164 (62.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 27 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 66
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 106 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 152
>UNIPROTKB|Q1JQ73 [details] [associations]
symbol:elavl1-a "ELAV-like protein 1-A" species:8355
"Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0008298 "intracellular mRNA localization" evidence=IMP]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA;IPI]
[GO:0031440 "regulation of mRNA 3'-end processing" evidence=IC]
[GO:0048255 "mRNA stabilization" evidence=IC;IGI] [GO:0051259
"protein oligomerization" evidence=IDA] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
KO:K13208 EMBL:U17596 EMBL:BC116459 PIR:I51675
RefSeq:NP_001084078.1 UniGene:Xl.49136 ProteinModelPortal:Q1JQ73
SMR:Q1JQ73 MINT:MINT-274235 PRIDE:Q1JQ73 GeneID:399292
KEGG:xla:399292 CTD:399292 Xenbase:XB-GENE-6254178 GO:GO:0031440
Uniprot:Q1JQ73
Length = 337
Score = 164 (62.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 19 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 58
>UNIPROTKB|B4DVB8 [details] [associations]
symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 HOVERGEN:HBG002295 UniGene:Hs.184492
UniGene:Hs.713744 HGNC:HGNC:3312 HOGENOM:HOG000231162
TIGRFAMs:TIGR01661 EMBL:AC010336 EMBL:AC008975 EMBL:AK301013
IPI:IPI00301936 ProteinModelPortal:B4DVB8 SMR:B4DVB8 IntAct:B4DVB8
STRING:B4DVB8 PRIDE:B4DVB8 Ensembl:ENST00000351593 OMA:RFGGPLH
ArrayExpress:B4DVB8 Bgee:B4DVB8 Uniprot:B4DVB8
Length = 353
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 31/40 (77%), Positives = 36/40 (90%)
Query: 32 KTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
+TNLIVNYLPQ MTQ+E++SLFSS+GEVES KLIRDK G
Sbjct: 46 RTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAG 85
Score = 97 (39.2 bits), Expect = 0.00026, P = 0.00026
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS+E K NL ++ LP+TMTQ++++ +FS G + + +++ D+TTG
Sbjct: 125 PSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTG 171
>FB|FBgn0260400 [details] [associations]
symbol:elav "embryonic lethal abnormal vision" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0015030 "Cajal body" evidence=IDA] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0016070 "RNA metabolic
process" evidence=NAS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0008266
"poly(U) RNA binding" evidence=IDA] [GO:0031441 "negative
regulation of mRNA 3'-end processing" evidence=IDA] [GO:0003723
"RNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 GO:GO:0008266 GO:GO:0000166
EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 EMBL:AL022139
GO:GO:0007417 GO:GO:0009790 GO:GO:0007281 GO:GO:0015030
GO:GO:0000900 GO:GO:0031441 GO:GO:0007319 TIGRFAMs:TIGR01661
GeneTree:ENSGT00560000077064 KO:K13208 EMBL:M21152 EMBL:AY051822
PIR:A33130 RefSeq:NP_001014713.1 RefSeq:NP_001138142.1
RefSeq:NP_001245447.1 RefSeq:NP_525033.1 UniGene:Dm.4473
ProteinModelPortal:P16914 SMR:P16914 DIP:DIP-23700N IntAct:P16914
MINT:MINT-1597597 STRING:P16914 PaxDb:P16914 PRIDE:P16914
EnsemblMetazoa:FBtr0070091 EnsemblMetazoa:FBtr0307173 GeneID:31000
KEGG:dme:Dmel_CG4262 CTD:31000 FlyBase:FBgn0260400 eggNOG:NOG256997
InParanoid:Q7K7L9 OMA:DIGESKT PhylomeDB:P16914 GenomeRNAi:31000
NextBio:771397 Bgee:P16914 GermOnline:CG4262 Uniprot:P16914
Length = 483
Score = 166 (63.5 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 34/48 (70%), Positives = 42/48 (87%)
Query: 24 QTPSN--EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKT 69
Q SN E++TNLIVNYLPQTMT++E++SLFSSVGE+ES KLIRDK+
Sbjct: 138 QNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKS 185
>FB|FBgn0038345 [details] [associations]
symbol:CG5213 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000504
InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0022008
GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P19339
GeneTree:ENSGT00560000077064 EMBL:AY089405 RefSeq:NP_650473.1
UniGene:Dm.5039 SMR:Q9VF55 STRING:Q9VF55 EnsemblMetazoa:FBtr0083148
GeneID:41892 KEGG:dme:Dmel_CG5213 UCSC:CG5213-RA
FlyBase:FBgn0038345 eggNOG:NOG294033 InParanoid:Q9VF55 OMA:RRERTND
OrthoDB:EOG4DNCM8 GenomeRNAi:41892 NextBio:826136 Uniprot:Q9VF55
Length = 251
Score = 126 (49.4 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 28 NEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
N KTNLI+NYLPQ MT+ E+ LFS GE+ K+IR + TG
Sbjct: 36 NLRMKTNLILNYLPQDMTESELHRLFSKFGEIRKAKIIRHRRTG 79
>FB|FBgn0264270 [details] [associations]
symbol:Sxl "Sex lethal" species:7227 "Drosophila
melanogaster" [GO:0048024 "regulation of mRNA splicing, via
spliceosome" evidence=NAS;TAS] [GO:0019099 "female germ-line sex
determination" evidence=TAS] [GO:0007549 "dosage compensation"
evidence=NAS;TAS] [GO:0019101 "female somatic sex determination"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008187 "poly-pyrimidine tract binding" evidence=IDA]
[GO:0048025 "negative regulation of mRNA splicing, via spliceosome"
evidence=TAS] [GO:0007541 "sex determination, primary response to
X:A ratio" evidence=NAS;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0030237 "female sex determination" evidence=NAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0018993
"somatic sex determination" evidence=NAS;TAS] [GO:0003729 "mRNA
binding" evidence=ISS;TAS] [GO:0007530 "sex determination"
evidence=NAS;TAS] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
[GO:0007281 "germ cell development" evidence=TAS] [GO:0007548 "sex
differentiation" evidence=NAS;TAS] [GO:0017148 "negative regulation
of translation" evidence=IMP;IDA;NAS;TAS] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA;TAS] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=TAS] [GO:0000380
"alternative mRNA splicing, via spliceosome" evidence=TAS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0007224 "smoothened signaling pathway"
evidence=IDA] [GO:0008083 "growth factor activity" evidence=IDA]
[GO:0007446 "imaginal disc growth" evidence=IMP] [GO:0009994
"oocyte differentiation" evidence=IDA] [GO:0043234 "protein
complex" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006546
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0005737 GO:GO:0043234 GO:GO:0008266
GO:GO:0006355 GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330
GO:GO:0006351 GO:GO:0048027 GO:GO:0003730 GO:GO:0007281
GO:GO:0008083 GO:GO:0007548 GO:GO:0007224 GO:GO:0007131
GO:GO:0009994 GO:GO:0000900 GO:GO:0048025 GO:GO:0019099
GO:GO:0000380 GO:GO:0007541 GO:GO:0007446 GO:GO:0007549
GO:GO:0019101 GeneTree:ENSGT00560000077064 EMBL:M23635 EMBL:M23636
EMBL:M59447 EMBL:M59448 EMBL:BT003583 EMBL:BT099922 EMBL:BT100240
EMBL:BT120392 EMBL:S88324 EMBL:D84425 PIR:A31639 PIR:A39725
RefSeq:NP_001027062.1 RefSeq:NP_001027063.1 RefSeq:NP_001027064.1
RefSeq:NP_001027065.1 RefSeq:NP_001027066.1 RefSeq:NP_001162686.1
RefSeq:NP_001162687.1 RefSeq:NP_001162688.1 RefSeq:NP_001162689.1
RefSeq:NP_001162690.1 RefSeq:NP_001162691.1 RefSeq:NP_001245559.1
RefSeq:NP_524791.3 RefSeq:NP_727160.2 RefSeq:NP_727161.2
RefSeq:NP_727162.2 RefSeq:NP_727163.2 RefSeq:NP_727164.2
RefSeq:NP_727165.2 RefSeq:NP_727166.2 RefSeq:NP_727167.2
RefSeq:NP_727168.1 UniGene:Dm.4502 PDB:1B7F PDB:1SXL PDB:2SXL
PDB:3SXL PDBsum:1B7F PDBsum:1SXL PDBsum:2SXL PDBsum:3SXL
ProteinModelPortal:P19339 SMR:P19339 IntAct:P19339 MINT:MINT-276991
STRING:P19339 PaxDb:P19339 PRIDE:P19339 EnsemblMetazoa:FBtr0331255
EnsemblMetazoa:FBtr0331262 EnsemblMetazoa:FBtr0331268
GeneID:3772180 KEGG:dme:Dmel_CG18350 CTD:3772180
FlyBase:FBgn0003659 eggNOG:NOG249299 InParanoid:P19339 OMA:HRDGAME
OrthoDB:EOG4F4QSS EvolutionaryTrace:P19339 NextBio:852740
Bgee:P19339 GermOnline:CG18350 TIGRFAMs:TIGR01659 Uniprot:P19339
Length = 354
Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLIVNYLPQ MT E+ +LF ++G + +C+++RD TG
Sbjct: 123 SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTG 163
Score = 93 (37.8 bits), Expect = 0.00070, P = 0.00070
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 26 PSNEESK-TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGELSVVA 77
P E K TNL V LP+T+T +++ ++F G + ++RDK TG VA
Sbjct: 203 PGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVA 255
>FB|FBgn0024987 [details] [associations]
symbol:ssx "sister-of-Sex-lethal" species:7227 "Drosophila
melanogaster" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042742 "defense response to bacterium"
evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 EMBL:AE014298 GO:GO:0042742
GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P19339 EMBL:AL023893
SMR:O76876 IntAct:O76876 MINT:MINT-315293 STRING:O76876
UCSC:CG3056-RA FlyBase:FBgn0024987 eggNOG:NOG321849
InParanoid:O76876 OrthoDB:EOG4M37RG NextBio:771866 Uniprot:O76876
Length = 485
Score = 126 (49.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 31 SKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
S TNLI+NYLPQ MT E+ +LFS G + +CK++RD TG
Sbjct: 91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTG 131
>DICTYBASE|DDB_G0290307 [details] [associations]
symbol:DDB_G0290307 "ELAVL1-like protein"
species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0290307 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000162 eggNOG:NOG256997 RefSeq:XP_635793.1
ProteinModelPortal:Q54G90 EnsemblProtists:DDB0233651 GeneID:8627598
KEGG:ddi:DDB_G0290307 InParanoid:Q54G90 OMA:SATNQCK Uniprot:Q54G90
Length = 459
Score = 115 (45.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 5 PQQXXXXXXXXXXXXXXXXQTPSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKL 64
P T SN + NL +++LP T T + ++S+FS+ GE++SC++
Sbjct: 71 PPPPTTTTTTTTTMTQTSTSTSSNSANSGNLFISFLPATYTSDTLRSIFSAFGEIDSCRV 130
Query: 65 IRDKTTG 71
+ D TG
Sbjct: 131 MVDLNTG 137
>DICTYBASE|DDB_G0292472 [details] [associations]
symbol:DDB_G0292472 species:44689 "Dictyostelium
discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0292472 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 EMBL:AAFI02000190 eggNOG:NOG321849 RefSeq:XP_629639.1
ProteinModelPortal:Q54D57 EnsemblProtists:DDB0184418 GeneID:8628703
KEGG:ddi:DDB_G0292472 InParanoid:Q54D57 OMA:ANINFAF Uniprot:Q54D57
Length = 550
Score = 112 (44.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 30 ESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLI--RDKT-TGELSVVANS 79
++ TNLIVN +P++M E+KSLF GE+ESCK++ R K G ++ NS
Sbjct: 79 DALTNLIVNNIPKSMDSNELKSLFDKFGEIESCKIVFNRKKDGNGNSNININS 131
>TAIR|locus:2176222 [details] [associations]
symbol:AT5G51300 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=RCA] InterPro:IPR000504
InterPro:IPR001878 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
PROSITE:PS50102 PROSITE:PS50158 SMART:SM00322 SMART:SM00343
SMART:SM00360 EMBL:CP002688 GO:GO:0008380 GO:GO:0000166
GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:4.10.60.10
SUPFAM:SSF57756 HSSP:Q9BW01 KO:K13095 EMBL:AB023044 OMA:GDGPSHE
EMBL:AY142629 EMBL:AK316802 EMBL:AK317057 IPI:IPI00537668
RefSeq:NP_001032055.1 RefSeq:NP_199943.1 RefSeq:NP_851169.1
UniGene:At.22924 ProteinModelPortal:Q9LU44 SMR:Q9LU44 IntAct:Q9LU44
STRING:Q9LU44 PRIDE:Q9LU44 EnsemblPlants:AT5G51300.1
EnsemblPlants:AT5G51300.2 EnsemblPlants:AT5G51300.3 GeneID:835204
KEGG:ath:AT5G51300 TAIR:At5g51300 InParanoid:Q9LU44
PhylomeDB:Q9LU44 ProtClustDB:CLSN2687224 Genevestigator:Q9LU44
Uniprot:Q9LU44
Length = 804
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 26 PSNEESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
PS E +TNL + +LP + + + +LFSS GE+ K+I+D+ TG
Sbjct: 473 PSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTG 518
>DICTYBASE|DDB_G0291486 [details] [associations]
symbol:DDB_G0291486 "putative splicing regulator"
species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0291486 EMBL:AAFI02000177
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG251494
RefSeq:XP_635247.1 ProteinModelPortal:Q54EJ3
EnsemblProtists:DDB0233674 GeneID:8628193 KEGG:ddi:DDB_G0291486
InParanoid:Q54EJ3 OMA:PMGNGMN Uniprot:Q54EJ3
Length = 489
Score = 99 (39.9 bits), Expect = 0.00025, P = 0.00025
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 33 TNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
T L V +P++ +EE+K+LF+++ +ES LI++KTT E
Sbjct: 3 TKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNE 42
>UNIPROTKB|F1NEX8 [details] [associations]
symbol:RBM45 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 OMA:DIWVVKD GeneTree:ENSGT00680000100059
EMBL:AADN02020000 IPI:IPI00596036 ProteinModelPortal:F1NEX8
Ensembl:ENSGALT00000014983 Uniprot:F1NEX8
Length = 502
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
+E T + V +P+T T+E+++ F G++E C +I++KTTGE
Sbjct: 144 DEELTRIFV-MIPKTYTEEDLREKFKMYGDIEYCSIIKNKTTGE 186
>RGD|1304813 [details] [associations]
symbol:Rbms2 "RNA binding motif, single stranded interacting
protein 2" species:10116 "Rattus norvegicus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 RGD:1304813 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003723 EMBL:CH474104 GeneTree:ENSGT00630000089747
eggNOG:NOG320163 HOGENOM:HOG000008467 HOVERGEN:HBG053108 CTD:5939
OMA:SQQMAPP EMBL:BC097377 IPI:IPI00371268 RefSeq:NP_001020574.1
UniGene:Rn.162925 SMR:Q4QR81 Ensembl:ENSRNOT00000048848
GeneID:288771 KEGG:rno:288771 UCSC:RGD:1304813 InParanoid:Q4QR81
NextBio:628683 Genevestigator:Q4QR81 Uniprot:Q4QR81
Length = 379
Score = 84 (34.6 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E+ TNL ++ LP +M ++E++ + G+V S +++RD TTG
Sbjct: 129 EQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TTG 170
Score = 31 (16.0 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 74 SVVANSIFAPELNGLHSQ 91
+V ++S+ E NG SQ
Sbjct: 344 AVPSSSVSVEESNGQQSQ 361
>UNIPROTKB|H0YCP8 [details] [associations]
symbol:PUF60 "Poly(U)-binding-splicing factor PUF60"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
EMBL:AC105219 EMBL:AC105049 HGNC:HGNC:17042 Ensembl:ENST00000532884
Uniprot:H0YCP8
Length = 273
Score = 92 (37.4 bits), Expect = 0.00058, P = 0.00058
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 40 LPQTMTQEEMKSLFSSVGEVESCKLIRDKTTGE 72
LPQ ++ +++KS+F + G+++SC L RD TTG+
Sbjct: 103 LPQDLSDDDIKSVFEAFGKIKSCTLARDPTTGK 135
>MGI|MGI:1861776 [details] [associations]
symbol:Rbms2 "RNA binding motif, single stranded interacting
protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
SMART:SM00360 MGI:MGI:1861776 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003723 GeneTree:ENSGT00630000089747
eggNOG:NOG320163 HOGENOM:HOG000008467 HOVERGEN:HBG053108
OrthoDB:EOG469QV2 CTD:5939 OMA:SQQMAPP EMBL:BC021627 EMBL:AK054482
IPI:IPI00121520 RefSeq:NP_001034169.1 RefSeq:NP_062685.2
UniGene:Mm.42247 ProteinModelPortal:Q8VC70 SMR:Q8VC70 STRING:Q8VC70
PhosphoSite:Q8VC70 PRIDE:Q8VC70 Ensembl:ENSMUST00000092033
GeneID:56516 KEGG:mmu:56516 UCSC:uc007hlm.1 InParanoid:Q8VC70
ChiTaRS:RBMS2 NextBio:312832 Bgee:Q8VC70 Genevestigator:Q8VC70
GermOnline:ENSMUSG00000040043 Uniprot:Q8VC70
Length = 383
Score = 80 (33.2 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 15/43 (34%), Positives = 29/43 (67%)
Query: 29 EESKTNLIVNYLPQTMTQEEMKSLFSSVGEVESCKLIRDKTTG 71
E+ TNL ++ LP +M ++E++ + G+V S +++RD T+G
Sbjct: 133 EQDPTNLYISNLPLSMDEQELEGMLKPFGQVISTRILRD-TSG 174
Score = 32 (16.3 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 74 SVVANSIFAPELNGLHSQ 91
+V ++S+ A E NG +Q
Sbjct: 348 AVPSSSVSAEESNGQQNQ 365
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.122 0.321 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 100 84 0.00091 102 3 10 23 0.49 29
29 0.45 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 63
No. of states in DFA: 559 (59 KB)
Total size of DFA: 120 KB (2078 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.97u 0.08s 15.05t Elapsed: 00:00:11
Total cpu time: 14.97u 0.08s 15.05t Elapsed: 00:00:11
Start: Thu Aug 15 12:01:52 2013 End: Thu Aug 15 12:02:03 2013