AmiGO: BLAST Results


BLAST match view associations BLAST with fne fne fne found in neurons	protein from Drosophila melanogaster	4.1e-49
BLAST match view associations BLAST with Rbp9 Rbp9 Rbp9 RNA-binding protein 9	protein from Drosophila melanogaster	1.5e-44
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Bos taurus	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with elavl4 elavl4 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	gene_product from Danio rerio	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	9.9e-39
BLAST match view associations BLAST with elavl2 elavl2 elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	gene_product from Danio rerio	1.6e-38
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	protein from Mus musculus	5.5e-38
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4	gene from Rattus norvegicus	5.5e-38
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-37
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 ELAV-like protein 2	protein from Homo sapiens	1.1e-37
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 ELAV-like protein 2	protein from Homo sapiens	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	gene from Rattus norvegicus	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV-like protein 2	protein from Rattus norvegicus	1.1e-37
BLAST match view associations BLAST with elavl3 elavl3 elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	gene_product from Danio rerio	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	protein from Mus musculus	1.0e-36
BLAST match view associations BLAST with F1SNK9 F1SNK9 F1SNK9 Uncharacterized protein	protein from Sus scrofa	1.0e-36
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	2.7e-36
BLAST match view associations BLAST with elav elav elav embryonic lethal abnormal vision	protein from Drosophila melanogaster	2.7e-36
BLAST match view associations BLAST with elavl2 elavl2 elavl2 ELAV-like protein 2	protein from Xenopus laevis	1.5e-35
BLAST match view associations BLAST with LOC100515074 LOC100515074 LOC100515074 Uncharacterized protein	protein from Sus scrofa	1.9e-35
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 ELAV-like protein 3	protein from Homo sapiens	2.4e-35
BLAST match view associations BLAST with Elavl3 Elavl3 Elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	protein from Mus musculus	2.4e-35
BLAST match view associations BLAST with Elavl3 Elavl3 Elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	gene from Rattus norvegicus	2.4e-35
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein from Mus musculus	9.5e-34
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene from Rattus norvegicus	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Gallus gallus	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Bos taurus	9.5e-34
BLAST match view associations BLAST with LOC480466 LOC480466 LOC480466 Uncharacterized protein	protein from Canis lupus familiaris	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 cDNA FLJ60076, highly similar to ELAV-like protein 1	protein from Homo sapiens	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like protein 1	protein from Homo sapiens	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Sus scrofa	1.5e-33
BLAST match view associations BLAST with hug hug hug HuG	gene_product from Danio rerio	2.0e-33
BLAST match view associations BLAST with elavl1-a elavl1-a elavl1-a ELAV-like protein 1-A	protein from Xenopus laevis	3.2e-33
BLAST match view associations BLAST with elavl1-b elavl1-b elavl1-b ELAV-like protein 1-B	protein from Xenopus laevis	4.1e-33
BLAST match view associations BLAST with elavl1 elavl1 elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene_product from Danio rerio	4.1e-33
BLAST match view associations BLAST with elavl1 elavl1 elavl1 ELAV-like protein 1	protein from Xenopus (Silurana) tropicalis	2.3e-32
BLAST match view associations BLAST with F1PPC3 F1PPC3 F1PPC3 Uncharacterized protein	protein from Canis lupus familiaris	3.5e-27
BLAST match view associations BLAST with exc-7 exc-7 exc-7	gene from Caenorhabditis elegans	3.0e-20
BLAST match view associations BLAST with DDB_G0290307 DDB_G0290307 DDB_G0290307 ELAVL1-like protein	gene from Dictyostelium discoideum	3.3e-14
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-12
BLAST match view associations BLAST with DDB_G0274523 DDB_G0274523 DDB_G0274523 RNA recognition motif-containing protein RRM	gene from Dictyostelium discoideum	1.6e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 cDNA FLJ42868 fis, clone BRHIP2021615, highly similar to Homo sapiens bruno-like 6, RNA binding protein, mRNA	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with Celf6 Celf6 Celf6 CUGBP, Elav-like family member 6	protein from Mus musculus	4.9e-12
BLAST match view associations BLAST with Celf6 Celf6 Celf6 CUGBP, Elav-like family member 6	gene from Rattus norvegicus	4.9e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 CUGBP Elav-like family member 6	protein from Homo sapiens	5.3e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Bos taurus	5.4e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Sus scrofa	5.4e-12
BLAST match view associations BLAST with CELF3 CELF3 CELF3 cDNA FLJ51939, highly similar to Homo sapiens trinucleotide repeat containing 4 (TNRC4), mRNA	protein from Homo sapiens	7.9e-12
BLAST match view associations BLAST with celf4 celf4 celf4 CUGBP, Elav-like family member 4	gene_product from Danio rerio	1.3e-11
BLAST match view associations BLAST with LOC100737017 LOC100737017 LOC100737017 Uncharacterized protein	protein from Sus scrofa	1.7e-11
BLAST match view associations BLAST with CELF4 CELF4 CELF4 Uncharacterized protein	protein from Gallus gallus	2.7e-11
BLAST match view associations BLAST with SF3B4 SF3B4 SF3B4 Splicing factor 3B subunit 4	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with tnrc4-b tnrc4-b tnrc4-b CUGBP Elav-like family member 3-B	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with bru-3 bru-3 bru-3 bruno-3	protein from Drosophila melanogaster	3.0e-11
BLAST match view associations BLAST with celf3b celf3b celf3b cugbp, Elav-like family member 3b	gene_product from Danio rerio	3.3e-11
BLAST match view associations BLAST with LOC100851458 LOC100851458 LOC100851458 Uncharacterized protein	protein from Bos taurus	4.4e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 cDNA FLJ51739, highly similar to Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript variant 2, mRNA	protein from Homo sapiens	4.6e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Bos taurus	4.7e-11
BLAST match view associations BLAST with tiar-1 tiar-1 tiar-1	gene from Caenorhabditis elegans	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Homo sapiens	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 Uncharacterized protein	protein from Sus scrofa	4.7e-11
BLAST match view associations BLAST with Celf3 Celf3 Celf3 CUGBP, Elav-like family member 3	protein from Mus musculus	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Homo sapiens	4.8e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Gallus gallus	5.1e-11
BLAST match view associations BLAST with CUGBP1 CUGBP1 CUGBP1 Uncharacterized protein	protein from Bos taurus	5.1e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Homo sapiens	5.1e-11
BLAST match view associations BLAST with Celf1 Celf1 Celf1 CUGBP, Elav-like family member 1	protein from Mus musculus	5.1e-11
BLAST match view associations BLAST with Celf1 Celf1 Celf1 CUGBP, Elav-like family member 1	gene from Rattus norvegicus	5.2e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Gallus gallus	5.2e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 Uncharacterized protein	protein from Canis lupus familiaris	5.7e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Pongo abelii	5.7e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUG triplet repeat, RNA binding protein 1, isoform CRA_c	protein from Homo sapiens	5.7e-11
BLAST match view associations BLAST with tnrc4-a tnrc4-a tnrc4-a CUGBP Elav-like family member 3-A	protein from Xenopus laevis	6.0e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 Uncharacterized protein	protein from Canis lupus familiaris	6.2e-11
BLAST match view associations BLAST with Rox8 Rox8 Rox8	protein from Drosophila melanogaster	6.2e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.6e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.6e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.7e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-11
BLAST match view associations BLAST with Celf3 Celf3 Celf3 CUGBP, Elav-like family member 3	gene from Rattus norvegicus	6.8e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Homo sapiens	6.9e-11
BLAST match view associations BLAST with celf2 celf2 celf2 cugbp, Elav-like family member 2	gene_product from Danio rerio	7.0e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Homo sapiens	7.1e-11
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy13319
        (117 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0086675 - symbol:fne "found in neurons" species:72...   512  4.1e-49   1
FB|FBgn0010263 - symbol:Rbp9 "RNA-binding protein 9" spec...   469  1.5e-44   1
UNIPROTKB|A2VDK5 - symbol:ELAVL4 "Uncharacterized protein...   416  6.1e-39   1
UNIPROTKB|F1P856 - symbol:ELAVL4 "Uncharacterized protein...   416  6.1e-39   1
UNIPROTKB|J9PAL3 - symbol:ELAVL4 "Uncharacterized protein...   416  6.1e-39   1
UNIPROTKB|B1APY9 - symbol:ELAVL4 "cDNA FLJ50619, highly s...   416  6.1e-39   1
ZFIN|ZDB-GENE-990415-246 - symbol:elavl4 "ELAV (embryonic...   416  6.1e-39   1
UNIPROTKB|F1NLH0 - symbol:ELAVL4 "Uncharacterized protein...   414  9.9e-39   1
ZFIN|ZDB-GENE-040704-9 - symbol:elavl2 "ELAV (embryonic l...   412  1.6e-38   1
UNIPROTKB|B1APY8 - symbol:ELAVL4 "ELAV-like protein 4" sp...   407  5.5e-38   1
UNIPROTKB|P26378 - symbol:ELAVL4 "ELAV-like protein 4" sp...   407  5.5e-38   1
MGI|MGI:107427 - symbol:Elavl4 "ELAV (embryonic lethal, a...   407  5.5e-38   1
RGD|1560027 - symbol:Elavl4 "ELAV (embryonic lethal, abno...   407  5.5e-38   1
UNIPROTKB|D4AAT0 - symbol:Elavl4 "ELAV-like protein 4" sp...   407  5.5e-38   1
UNIPROTKB|F1LRL1 - symbol:Elavl4 "ELAV-like protein 4" sp...   407  5.5e-38   1
UNIPROTKB|F1LRX3 - symbol:Elavl4 "ELAV-like protein 4" sp...   407  5.5e-38   1
UNIPROTKB|O09032 - symbol:Elavl4 "ELAV-like protein 4" sp...   407  5.5e-38   1
UNIPROTKB|E2RI94 - symbol:ELAVL2 "Uncharacterized protein...   404  1.1e-37   1
UNIPROTKB|B1AM49 - symbol:ELAVL2 "ELAV-like protein 2" sp...   404  1.1e-37   1
UNIPROTKB|Q12926 - symbol:ELAVL2 "ELAV-like protein 2" sp...   404  1.1e-37   1
RGD|628611 - symbol:Elavl2 "ELAV (embryonic lethal, abnor...   404  1.1e-37   1
UNIPROTKB|Q8CH84 - symbol:Elavl2 "ELAV-like protein 2" sp...   404  1.1e-37   1
ZFIN|ZDB-GENE-980526-76 - symbol:elavl3 "ELAV (embryonic ...   404  1.1e-37   1
MGI|MGI:1100887 - symbol:Elavl2 "ELAV (embryonic lethal, ...   395  1.0e-36   1
UNIPROTKB|D4A7H6 - symbol:Elavl2 "ELAV-like protein 2" sp...   395  1.0e-36   1
UNIPROTKB|F1SNK9 - symbol:ELAVL2 "Uncharacterized protein...   395  1.0e-36   1
UNIPROTKB|E1C240 - symbol:ELAVL2 "Uncharacterized protein...   391  2.7e-36   1
FB|FBgn0260400 - symbol:elav "embryonic lethal abnormal v...   391  2.7e-36   1
UNIPROTKB|Q91903 - symbol:elavl2 "ELAV-like protein 2" sp...   384  1.5e-35   1
UNIPROTKB|F1SA16 - symbol:ELAVL3 "Uncharacterized protein...   383  1.9e-35   1
UNIPROTKB|G3N063 - symbol:ELAVL2 "Uncharacterized protein...   382  2.4e-35   1
UNIPROTKB|F1N4V6 - symbol:ELAVL3 "Uncharacterized protein...   382  2.4e-35   1
UNIPROTKB|F1PVV1 - symbol:ELAVL3 "Uncharacterized protein...   382  2.4e-35   1
UNIPROTKB|Q14576 - symbol:ELAVL3 "ELAV-like protein 3" sp...   382  2.4e-35   1
MGI|MGI:109157 - symbol:Elavl3 "ELAV (embryonic lethal, a...   382  2.4e-35   1
RGD|628892 - symbol:Elavl3 "ELAV (embryonic lethal, abnor...   382  2.4e-35   1
MGI|MGI:1100851 - symbol:Elavl1 "ELAV (embryonic lethal, ...   367  9.5e-34   1
RGD|1308649 - symbol:Elavl1 "ELAV (embryonic lethal, abno...   367  9.5e-34   1
UNIPROTKB|F1N9I5 - symbol:ELAVL1 "Uncharacterized protein...   367  9.5e-34   1
UNIPROTKB|Q3ZCE2 - symbol:ELAVL1 "ELAV (Embryonic lethal,...   367  9.5e-34   1
UNIPROTKB|F1PSC4 - symbol:ELAVL1 "Uncharacterized protein...   367  9.5e-34   1
UNIPROTKB|B4DVB8 - symbol:ELAVL1 "ELAV-like protein 1" sp...   367  9.5e-34   1
UNIPROTKB|Q15717 - symbol:ELAVL1 "ELAV-like protein 1" sp...   367  9.5e-34   1
UNIPROTKB|D3K5N7 - symbol:ELAVL1 "ELAV (Embryonic lethal,...   365  1.5e-33   1
ZFIN|ZDB-GENE-000210-17 - symbol:hug "HuG" species:7955 "...   364  2.0e-33   1
UNIPROTKB|Q1JQ73 - symbol:elavl1-a "ELAV-like protein 1-A...   362  3.2e-33   1
UNIPROTKB|Q5U259 - symbol:elavl1-b "ELAV-like protein 1-B...   361  4.1e-33   1
ZFIN|ZDB-GENE-990415-245 - symbol:elavl1 "ELAV (embryonic...   361  4.1e-33   1
UNIPROTKB|Q6GLB5 - symbol:elavl1 "ELAV-like protein 1" sp...   354  2.3e-32   1
UNIPROTKB|F1PPC3 - symbol:F1PPC3 "Uncharacterized protein...   305  3.5e-27   1
WB|WBGene00001368 - symbol:exc-7 species:6239 "Caenorhabd...   245  3.0e-20   1
DICTYBASE|DDB_G0290307 - symbol:DDB_G0290307 "ELAVL1-like...   190  3.3e-14   1
UNIPROTKB|E2RJG5 - symbol:CELF6 "Uncharacterized protein"...   174  1.5e-12   1
DICTYBASE|DDB_G0274523 - symbol:DDB_G0274523 "RNA recogni...   179  1.6e-12   1
UNIPROTKB|B3KWE6 - symbol:BRUNOL6 "cDNA FLJ42868 fis, clo...   170  2.4e-12   1
MGI|MGI:1923433 - symbol:Celf6 "CUGBP, Elav-like family m...   170  4.9e-12   1
RGD|1310451 - symbol:Celf6 "CUGBP, Elav-like family membe...   170  4.9e-12   1
UNIPROTKB|Q96J87 - symbol:CELF6 "CUGBP Elav-like family m...   170  5.3e-12   1
UNIPROTKB|E1B8K2 - symbol:CELF6 "Uncharacterized protein"...   170  5.4e-12   1
UNIPROTKB|F1SHM1 - symbol:CELF6 "Uncharacterized protein"...   170  5.4e-12   1
UNIPROTKB|F1P5J4 - symbol:BRUNOL6 "Uncharacterized protei...   166  7.3e-12   1
UNIPROTKB|B4DQL3 - symbol:CELF3 "CUGBP Elav-like family m...   161  7.9e-12   1
ZFIN|ZDB-GENE-040718-300 - symbol:celf4 "CUGBP, Elav-like...   167  1.3e-11   1
UNIPROTKB|F1RUN0 - symbol:CELF2 "Uncharacterized protein"...   157  1.7e-11   1
UNIPROTKB|F1NYP4 - symbol:CELF4 "Uncharacterized protein"...   161  2.7e-11   1
UNIPROTKB|Q5SZ64 - symbol:SF3B4 "Splicing factor 3B subun...   155  2.8e-11   1
UNIPROTKB|Q7ZWM3 - symbol:tnrc4-b "CUGBP Elav-like family...   163  2.8e-11   1
FB|FBgn0264001 - symbol:bru-3 "bruno-3" species:7227 "Dro...   162  3.0e-11   1
ZFIN|ZDB-GENE-110408-50 - symbol:celf3b "cugbp, Elav-like...   162  3.3e-11   1
UNIPROTKB|Q5SZQ7 - symbol:CELF3 "CUGBP Elav-like family m...   161  3.8e-11   1
UNIPROTKB|E1BIM7 - symbol:LOC100851458 "Uncharacterized p...   160  4.4e-11   1
UNIPROTKB|B4DIB6 - symbol:CELF2 "cDNA FLJ51739, highly si...   160  4.6e-11   1
UNIPROTKB|Q08E07 - symbol:CELF3 "CUGBP Elav-like family m...   161  4.7e-11   1
WB|WBGene00015943 - symbol:tiar-1 species:6239 "Caenorhab...   160  4.7e-11   1
UNIPROTKB|Q5SZQ8 - symbol:CELF3 "CUGBP Elav-like family m...   161  4.7e-11   1
UNIPROTKB|F1ST15 - symbol:CELF3 "Uncharacterized protein"...   161  4.7e-11   1
MGI|MGI:1926034 - symbol:Celf3 "CUGBP, Elav-like family m...   161  4.7e-11   1
UNIPROTKB|H0Y623 - symbol:CELF3 "CUGBP Elav-like family m...   161  4.8e-11   1
UNIPROTKB|F1ND14 - symbol:CELF1 "CUGBP Elav-like family m...   161  5.1e-11   1
UNIPROTKB|A7MB95 - symbol:CUGBP1 "Uncharacterized protein...   161  5.1e-11   1
UNIPROTKB|Q92879 - symbol:CELF1 "CUGBP Elav-like family m...   161  5.1e-11   1
MGI|MGI:1342295 - symbol:Celf1 "CUGBP, Elav-like family m...   161  5.1e-11   1
RGD|1307721 - symbol:Celf1 "CUGBP, Elav-like family membe...   161  5.2e-11   1
UNIPROTKB|Q4QQT3 - symbol:Celf1 "CUGBP Elav-like family m...   161  5.2e-11   1
UNIPROTKB|Q5F3T7 - symbol:CELF1 "CUGBP Elav-like family m...   161  5.2e-11   1
UNIPROTKB|E2R8F6 - symbol:CELF1 "Uncharacterized protein"...   161  5.7e-11   1
UNIPROTKB|Q5R995 - symbol:CELF1 "CUGBP Elav-like family m...   161  5.7e-11   1
UNIPROTKB|G5EA30 - symbol:CELF1 "CUG triplet repeat, RNA ...   161  5.7e-11   1
UNIPROTKB|Q91579 - symbol:tnrc4-a "CUGBP Elav-like family...   160  6.0e-11   1
UNIPROTKB|E2RGA8 - symbol:CELF3 "Uncharacterized protein"...   161  6.2e-11   1
FB|FBgn0005649 - symbol:Rox8 "Rox8" species:7227 "Drosoph...   160  6.2e-11   1
UNIPROTKB|F1NZY6 - symbol:CELF2 "CUGBP Elav-like family m...   160  6.6e-11   1
UNIPROTKB|Q7T2T1 - symbol:CELF2 "CUGBP Elav-like family m...   160  6.6e-11   1
UNIPROTKB|E1C045 - symbol:CELF2 "CUGBP Elav-like family m...   160  6.7e-11   1
UNIPROTKB|F1P674 - symbol:CELF2 "Uncharacterized protein"...   160  6.7e-11   1
UNIPROTKB|F1P017 - symbol:CELF2 "CUGBP Elav-like family m...   160  6.8e-11   1
RGD|1563168 - symbol:Celf3 "CUGBP, Elav-like family membe...   160  6.8e-11   1
UNIPROTKB|Q5VZZ6 - symbol:CELF2 "CUGBP Elav-like family m...   160  6.9e-11   1
ZFIN|ZDB-GENE-030826-35 - symbol:celf2 "cugbp, Elav-like ...   161  7.0e-11   1
UNIPROTKB|O95319 - symbol:CELF2 "CUGBP Elav-like family m...   160  7.1e-11   1

WARNING:  Descriptions of 1036 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0086675 [details] [associations]
            symbol:fne "found in neurons" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0051252 "regulation of
            RNA metabolic process" evidence=IMP] [GO:0008266 "poly(U) RNA
            binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008049 "male courtship behavior" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166
            EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 eggNOG:COG0724
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 KO:K13208
            OMA:SNSRNCP HSSP:Q60900 GO:GO:0051252 EMBL:AF239667 EMBL:BT120384
            RefSeq:NP_001096965.1 RefSeq:NP_001245646.1 RefSeq:NP_001245648.1
            RefSeq:NP_001245649.1 RefSeq:NP_572842.1 UniGene:Dm.3314 SMR:Q9VYI0
            IntAct:Q9VYI0 MINT:MINT-1646975 STRING:Q9VYI0
            EnsemblMetazoa:FBtr0073712 EnsemblMetazoa:FBtr0113493
            EnsemblMetazoa:FBtr0306738 EnsemblMetazoa:FBtr0308694
            EnsemblMetazoa:FBtr0308695 EnsemblMetazoa:FBtr0333319
            EnsemblMetazoa:FBtr0333320 GeneID:32245 KEGG:dme:Dmel_CG4396
            UCSC:CG4396-RA CTD:32245 FlyBase:FBgn0086675 InParanoid:Q9VYI0
            OrthoDB:EOG44B8HT GenomeRNAi:32245 NextBio:777561 Uniprot:Q9VYI0
        Length = 356

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 97/111 (87%), Positives = 103/111 (92%)

Query:     7 GLQRFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             G  R+SPL GDLLA+SILP N M GSGWCIFVYNLAPETEE+VLWQLFGPFGAVQSVKVI
Sbjct:   246 GRIRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVI 305

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RDLQT+KCKGFGFVTMTNYDEAVVAIQSLNGY LGNR+LQVSFKTNK KT+
Sbjct:   306 RDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKTKTT 356


>FB|FBgn0010263 [details] [associations]
            symbol:Rbp9 "RNA-binding protein 9" species:7227 "Drosophila
            melanogaster" [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0007293
            "germarium-derived egg chamber formation" evidence=TAS] [GO:0005634
            "nucleus" evidence=TAS] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0048477
            "oogenesis" evidence=IMP] [GO:0036093 "germ cell proliferation"
            evidence=IMP] [GO:0060856 "establishment of blood-brain barrier"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003730 GO:GO:0007293 TIGRFAMs:TIGR01661
            HSSP:P26378 GO:GO:0060856 FlyBase:FBgn0010263 EMBL:S55886
            ProteinModelPortal:Q26293 SMR:Q26293 STRING:Q26293 PRIDE:Q26293
            InParanoid:Q26293 ArrayExpress:Q26293 Bgee:Q26293 Uniprot:Q26293
        Length = 444

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 85/108 (78%), Positives = 98/108 (90%)

Query:     8 LQRFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIR 67
             + R+SPLT DL+ + ++  NT+  SGWCIFVYNLAP+TEE+VLWQLFGPFGAVQSVKVIR
Sbjct:   335 ISRYSPLTSDLITNGMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIR 394

Query:    68 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGK 115
             DLQ+NKCKGFGFVTMTNY+EAV+AIQSLNGY LGNR+LQVSFKTNK K
Sbjct:   395 DLQSNKCKGFGFVTMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNKNK 442

 Score = 126 (49.4 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+T  +  +  LF  FG V+S K+IRD  T +  G+GFV     ++A  AI +LN
Sbjct:   113 IVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINALN 172

Query:    97 GYALGNRILQVS 108
             G  L N+ ++VS
Sbjct:   173 GLRLQNKTIKVS 184


>UNIPROTKB|A2VDK5 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            OMA:SNSRNCP EMBL:DAAA02008922 EMBL:DAAA02008923 EMBL:BC133283
            IPI:IPI00729244 RefSeq:NP_001075075.1 UniGene:Bt.26853 SMR:A2VDK5
            STRING:A2VDK5 Ensembl:ENSBTAT00000028031 GeneID:535408
            KEGG:bta:535408 InParanoid:A2VDK5 NextBio:20876736 Uniprot:A2VDK5
        Length = 366

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 80/120 (66%), Positives = 98/120 (81%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   249 LLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 306

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   307 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 366

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    49 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   108 NGLRLQTKTIKVSY 121


>UNIPROTKB|F1P856 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:SNSRNCP EMBL:AAEX03009733
            Ensembl:ENSCAFT00000006315 Uniprot:F1P856
        Length = 382

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 80/120 (66%), Positives = 98/120 (81%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   265 LLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 322

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   323 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 382

 Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    65 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 123

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   124 NGLRLQTKTIKVSY 137


>UNIPROTKB|J9PAL3 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1996 EMBL:AAEX03009733
            RefSeq:XP_859918.1 ProteinModelPortal:J9PAL3
            Ensembl:ENSCAFT00000045412 GeneID:475361 KEGG:cfa:475361
            Uniprot:J9PAL3
        Length = 366

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 80/120 (66%), Positives = 98/120 (81%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   249 LLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 306

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   307 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 366

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    49 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   108 NGLRLQTKTIKVSY 121


>UNIPROTKB|B1APY9 [details] [associations]
            symbol:ELAVL4 "cDNA FLJ50619, highly similar to ELAV-like
            protein 4" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            UniGene:Hs.213050 HGNC:HGNC:3315 EMBL:AK298902 IPI:IPI00643012
            SMR:B1APY9 STRING:B1APY9 Ensembl:ENST00000371819 UCSC:uc009vyu.3
            Uniprot:B1APY9
        Length = 371

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 80/120 (66%), Positives = 98/120 (81%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   254 LLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 311

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   312 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 371

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    54 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   113 NGLRLQTKTIKVSY 126


>ZFIN|ZDB-GENE-990415-246 [details] [associations]
            symbol:elavl4 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 4 (Hu antigen D)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-246 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:CR931780 EMBL:CU467068
            EMBL:CU929301 IPI:IPI00920316 ProteinModelPortal:F1R133
            Ensembl:ENSDART00000134787 ArrayExpress:F1R133 Bgee:F1R133
            Uniprot:F1R133
        Length = 408

 Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
 Identities = 79/116 (68%), Positives = 97/116 (83%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   291 LLNMAYGVKRFSPITIDSMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 348

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   349 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 404

 Score = 112 (44.5 bits), Expect = 7.7e-06, P = 7.7e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    91 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 149

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   150 NGLRLQTKTIKVSY 163


>UNIPROTKB|F1NLH0 [details] [associations]
            symbol:ELAVL4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:SNSRNCP
            EMBL:AADN02012596 IPI:IPI00594347 ProteinModelPortal:F1NLH0
            Ensembl:ENSGALT00000017146 Uniprot:F1NLH0
        Length = 371

 Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
 Identities = 79/116 (68%), Positives = 97/116 (83%)

Query:     1 MLAINKGLQRFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPF
Sbjct:   254 LLNMAYGVKRFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPF 311

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   312 GAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 367

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    54 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   113 NGLRLQTKTIKVSY 126


>ZFIN|ZDB-GENE-040704-9 [details] [associations]
            symbol:elavl2 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 2 (Hu antigen B)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-040704-9 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OrthoDB:EOG4JHCFV EMBL:AL954145
            IPI:IPI00482002 UniGene:Dr.84858 SMR:Q1MT19
            Ensembl:ENSDART00000139420 InParanoid:Q1MT19 Uniprot:Q1MT19
        Length = 388

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 81/116 (69%), Positives = 95/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   LPA+   G+GWCIFVYNLAP+ +E+VLWQ+FGPF
Sbjct:   271 LLNMAYGVKRFSPMTIDGVTSLAGINLPAHA--GTGWCIFVYNLAPDADENVLWQMFGPF 328

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA VAI SLNGY LG+R+LQVSFKTNK
Sbjct:   329 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNK 384

 Score = 117 (46.2 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%)

Query:    25 PANTMNGS--GWCIFVYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             P    NGS       + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV
Sbjct:    56 PVEMPNGSEDSKTNLIVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFV 114

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSF 109
                   +A  AI +LNG  L  + ++VS+
Sbjct:   115 NYMEPKDAEKAINTLNGLRLQTKTIKVSY 143


>UNIPROTKB|B1APY8 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AL645730 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AL583843 EMBL:AL592182
            EMBL:AL731870 UniGene:Hs.213050 HGNC:HGNC:3315 OMA:SNSRNCP
            IPI:IPI00513758 SMR:B1APY8 STRING:B1APY8 Ensembl:ENST00000371821
            Uniprot:B1APY8
        Length = 385

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   277 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 334

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   335 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 385

 Score = 112 (44.5 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    54 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   113 NGLRLQTKTIKVSY 126


>UNIPROTKB|P26378 [details] [associations]
            symbol:ELAVL4 "ELAV-like protein 4" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=TAS] [GO:0003723 "RNA binding" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=TAS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 EMBL:CH471059
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0003730
            eggNOG:COG0724 EMBL:AL645730 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 EMBL:M62843
            EMBL:AY033995 EMBL:AY033996 EMBL:AY033997 EMBL:AY033998
            EMBL:AK297338 EMBL:AL583843 EMBL:AL592182 EMBL:AL731870
            EMBL:BC036071 IPI:IPI00395507 IPI:IPI00479625 IPI:IPI00607677
            IPI:IPI00644588 IPI:IPI00978372 PIR:A40348 RefSeq:NP_001138246.1
            RefSeq:NP_001138247.1 RefSeq:NP_001138248.1 RefSeq:NP_001138249.1
            RefSeq:NP_068771.2 UniGene:Hs.213050 PDB:1FXL PDB:1G2E PDBsum:1FXL
            PDBsum:1G2E ProteinModelPortal:P26378 SMR:P26378 IntAct:P26378
            MINT:MINT-1471928 STRING:P26378 PhosphoSite:P26378 DMDM:223590202
            PaxDb:P26378 PRIDE:P26378 Ensembl:ENST00000357083
            Ensembl:ENST00000371823 Ensembl:ENST00000371824
            Ensembl:ENST00000371827 Ensembl:ENST00000448907 GeneID:1996
            KEGG:hsa:1996 UCSC:uc001crz.3 UCSC:uc001csa.3 UCSC:uc001csb.2
            UCSC:uc001csc.3 CTD:1996 GeneCards:GC01P050513 HGNC:HGNC:3315
            HPA:CAB004442 MIM:168360 neXtProt:NX_P26378 PharmGKB:PA27743
            EvolutionaryTrace:P26378 GenomeRNAi:1996 NextBio:8073
            ArrayExpress:P26378 Bgee:P26378 CleanEx:HS_ELAVL4
            Genevestigator:P26378 GermOnline:ENSG00000162374 Uniprot:P26378
        Length = 380

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   272 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 329

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   330 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 380

 Score = 112 (44.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    49 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   108 NGLRLQTKTIKVSY 121


>MGI|MGI:107427 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4 (Hu antigen D)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:107427 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 EMBL:AL627425 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996
            EMBL:D31953 EMBL:AF041341 IPI:IPI00229977 IPI:IPI00466120
            PIR:JC2298 RefSeq:NP_034618.2 UniGene:Mm.3970
            ProteinModelPortal:Q61701 SMR:Q61701 STRING:Q61701
            PhosphoSite:Q61701 PaxDb:Q61701 PRIDE:Q61701
            Ensembl:ENSMUST00000106597 GeneID:15572 KEGG:mmu:15572
            InParanoid:A2A9R7 OMA:SNSRNCP NextBio:288560 Bgee:Q61701
            Genevestigator:Q61701 GermOnline:ENSMUSG00000028546 Uniprot:Q61701
        Length = 385

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   277 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 334

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   335 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 385

 Score = 112 (44.5 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    54 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 112

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   113 NGLRLQTKTIKVSY 126


>RGD|1560027 [details] [associations]
            symbol:Elavl4 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 4" species:10116 "Rattus norvegicus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO;ISS] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV CTD:1996 OMA:SNSRNCP
            EMBL:S83320 IPI:IPI00560167 RefSeq:NP_001071119.1 UniGene:Rn.134702
            ProteinModelPortal:O09032 SMR:O09032 STRING:O09032
            PhosphoSite:O09032 GeneID:432358 KEGG:rno:432358 UCSC:RGD:1560027
            InParanoid:O09032 NextBio:696819 ArrayExpress:O09032
            Genevestigator:O09032 GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   265 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 322

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   323 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 373

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    42 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   101 NGLRLQTKTIKVSY 114


>UNIPROTKB|D4AAT0 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00392493 ProteinModelPortal:D4AAT0
            Ensembl:ENSRNOT00000035262 ArrayExpress:D4AAT0 Uniprot:D4AAT0
        Length = 351

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   243 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 300

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   301 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 351

 Score = 112 (44.5 bits), Expect = 6.0e-06, P = 6.0e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    47 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 105

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   106 NGLRLQTKTIKVSY 119


>UNIPROTKB|F1LRL1 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 TIGRFAMs:TIGR01661 IPI:IPI00763452
            Ensembl:ENSRNOT00000064277 ArrayExpress:F1LRL1 Uniprot:F1LRL1
        Length = 384

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   276 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 333

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   334 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 384

 Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    53 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 111

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   112 NGLRLQTKTIKVSY 125


>UNIPROTKB|F1LRX3 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 IPI:IPI00808644
            Ensembl:ENSRNOT00000067007 ArrayExpress:F1LRX3 Uniprot:F1LRX3
        Length = 380

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   272 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 329

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   330 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 380

 Score = 112 (44.5 bits), Expect = 6.8e-06, P = 6.8e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    49 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 107

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   108 NGLRLQTKTIKVSY 121


>UNIPROTKB|O09032 [details] [associations]
            symbol:Elavl4 "ELAV-like protein 4" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1560027 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661 KO:K13208 OrthoDB:EOG4JHCFV
            CTD:1996 OMA:SNSRNCP EMBL:S83320 IPI:IPI00560167
            RefSeq:NP_001071119.1 UniGene:Rn.134702 ProteinModelPortal:O09032
            SMR:O09032 STRING:O09032 PhosphoSite:O09032 GeneID:432358
            KEGG:rno:432358 UCSC:RGD:1560027 InParanoid:O09032 NextBio:696819
            ArrayExpress:O09032 Genevestigator:O09032
            GermOnline:ENSRNOG00000023601 Uniprot:O09032
        Length = 373

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 78/111 (70%), Positives = 92/111 (82%)

Query:    10 RFSPLTGDLLASSI---LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D + S +   +P +T  G+GWCIFVYNL+P+++ESVLWQLFGPFGAV +VKVI
Sbjct:   265 RFSPITIDGMTSLVGMNIPGHT--GTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVI 322

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK   S
Sbjct:   323 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKAHKS 373

 Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    42 IVNYLPQNMTQEEFR-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   101 NGLRLQTKTIKVSY 114


>UNIPROTKB|E2RI94 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AAEX03007909
            EMBL:AAEX03007910 EMBL:AAEX03007911 EMBL:AAEX03007912
            Ensembl:ENSCAFT00000002645 Uniprot:E2RI94
        Length = 388

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPF
Sbjct:   271 LLNMAYGVKRFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPF 328

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   329 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    71 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   130 NGLRLQTKTIKVSY 143


>UNIPROTKB|B1AM49 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 TIGRFAMs:TIGR01661 EMBL:AL161628 EMBL:AL445623
            UniGene:Hs.166109 HGNC:HGNC:3313 OMA:RAVENGP SMR:B1AM49
            Ensembl:ENST00000359598 Uniprot:B1AM49
        Length = 387

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPF
Sbjct:   270 LLNMAYGVKRFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPF 327

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   328 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 383

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    70 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 128

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   129 NGLRLQTKTIKVSY 142


>UNIPROTKB|Q12926 [details] [associations]
            symbol:ELAVL2 "ELAV-like protein 2" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0006355 GO:GO:0000166
            Gene3D:3.30.70.330 EMBL:CH471071 GO:GO:0003730 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            EMBL:U12431 EMBL:U29943 EMBL:AB209294 EMBL:AL161628 EMBL:AL445623
            EMBL:BC030692 IPI:IPI00030250 IPI:IPI00219967 PIR:I38726 PIR:I39077
            RefSeq:NP_001164666.1 RefSeq:NP_001164668.1 RefSeq:NP_004423.2
            UniGene:Hs.166109 ProteinModelPortal:Q12926 SMR:Q12926
            STRING:Q12926 PhosphoSite:Q12926 DMDM:93141258 PaxDb:Q12926
            PRIDE:Q12926 DNASU:1993 Ensembl:ENST00000223951
            Ensembl:ENST00000380110 Ensembl:ENST00000380117
            Ensembl:ENST00000397312 Ensembl:ENST00000544538 GeneID:1993
            KEGG:hsa:1993 UCSC:uc003zps.3 UCSC:uc003zpu.3 CTD:1993
            GeneCards:GC09M023690 HGNC:HGNC:3313 HPA:CAB022222 MIM:601673
            neXtProt:NX_Q12926 PharmGKB:PA27741 InParanoid:Q12926 KO:K13208
            OrthoDB:EOG4JHCFV PhylomeDB:Q12926 GenomeRNAi:1993 NextBio:8059
            ArrayExpress:Q12926 Bgee:Q12926 CleanEx:HS_ELAVL2
            Genevestigator:Q12926 GermOnline:ENSG00000107105 Uniprot:Q12926
        Length = 359

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPF
Sbjct:   242 LLNMAYGVKRFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPF 299

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   300 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355

 Score = 116 (45.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    42 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   101 NGLRLQTKTIKVSY 114


>RGD|628611 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPF
Sbjct:   242 LLNMAYGVKRFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPF 299

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   300 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query:    40 NLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNG 97
             N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +LNG
Sbjct:    44 NYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102

Query:    98 YALGNRILQVSF 109
               L  + ++VS+
Sbjct:   103 LRLQTKTIKVSY 114


>UNIPROTKB|Q8CH84 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            eggNOG:COG0724 HOVERGEN:HBG002295 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 OrthoDB:EOG4JHCFV EMBL:AB098713 IPI:IPI00782044
            UniGene:Rn.12662 ProteinModelPortal:Q8CH84 SMR:Q8CH84 STRING:Q8CH84
            PhosphoSite:Q8CH84 UCSC:RGD:628611 InParanoid:Q8CH84 NextBio:625201
            ArrayExpress:Q8CH84 Genevestigator:Q8CH84
            GermOnline:ENSRNOG00000006853 Uniprot:Q8CH84
        Length = 359

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/116 (67%), Positives = 94/116 (81%)

Query:     1 MLAINKGLQRFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPF 57
             +L +  G++RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPF
Sbjct:   242 LLNMAYGVKRFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPF 299

Query:    58 GAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             GAV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   300 GAVTNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 355

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 27/72 (37%), Positives = 42/72 (58%)

Query:    40 NLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNG 97
             N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +LNG
Sbjct:    44 NYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNG 102

Query:    98 YALGNRILQVSF 109
               L  + ++VS+
Sbjct:   103 LRLQTKTIKVSY 114


>ZFIN|ZDB-GENE-980526-76 [details] [associations]
            symbol:elavl3 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 3 (Hu antigen C)" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-980526-76 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:P19339 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP OrthoDB:EOG43R3N0
            EMBL:CR385086 EMBL:BC065343 IPI:IPI00512421 UniGene:Dr.75060
            SMR:Q6P105 STRING:Q6P105 Ensembl:ENSDART00000028610
            InParanoid:Q6P105 Uniprot:Q6P105
        Length = 359

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 78/115 (67%), Positives = 94/115 (81%)

Query:     1 MLAINKGLQRFSPLTGDLLASSILPANTMN--GSGWCIFVYNLAPETEESVLWQLFGPFG 58
             +L  + G++RFSP+T D + +S+   N     G+GWCIFVYNL+PE +ESVLWQLFGPFG
Sbjct:   242 LLNASYGVKRFSPITIDSM-TSLAGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPFG 300

Query:    59 AVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             AV +VKVIRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKT+K
Sbjct:   301 AVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 355

 Score = 114 (45.2 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E     LFG  G ++S K++RD  T +  G+GFV   + ++A  AI +L
Sbjct:    41 IVNYLPQNMTQEEFK-SLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTL 99

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   100 NGLKLQTKTIKVSY 113


>MGI|MGI:1100887 [details] [associations]
            symbol:Elavl2 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 2 (Hu antigen B)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1100887 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 CTD:1993 KO:K13208 EMBL:U29088
            IPI:IPI00121676 PIR:JC6057 RefSeq:NP_034616.1 UniGene:Mm.318042
            ProteinModelPortal:Q60899 SMR:Q60899 STRING:Q60899
            PhosphoSite:Q60899 PaxDb:Q60899 PRIDE:Q60899
            Ensembl:ENSMUST00000008633 GeneID:15569 KEGG:mmu:15569
            InParanoid:Q60899 NextBio:288546 Bgee:Q60899 Genevestigator:Q60899
            GermOnline:ENSMUSG00000008489 Uniprot:Q60899
        Length = 360

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 76/107 (71%), Positives = 88/107 (82%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   252 RFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   310 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 356

 Score = 116 (45.9 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    42 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   101 NGLRLQTKTIKVSY 114


>UNIPROTKB|D4A7H6 [details] [associations]
            symbol:Elavl2 "ELAV-like protein 2" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            RGD:628611 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            TIGRFAMs:TIGR01661 IPI:IPI00192584 ProteinModelPortal:D4A7H6
            SMR:D4A7H6 Ensembl:ENSRNOT00000009035 ArrayExpress:D4A7H6
            Uniprot:D4A7H6
        Length = 346

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 76/107 (71%), Positives = 88/107 (82%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   238 RFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 295

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   296 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 342

 Score = 116 (45.9 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    42 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 100

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   101 NGLRLQTKTIKVSY 114


>UNIPROTKB|F1SNK9 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AEMK01195641
            EMBL:CU407236 Ensembl:ENSSSCT00000005656 Uniprot:F1SNK9
        Length = 400

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 76/107 (71%), Positives = 88/107 (82%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   292 RFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 349

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   350 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 396


>UNIPROTKB|E1C240 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:AADN02057847
            EMBL:AADN02057848 EMBL:AADN02057849 EMBL:AADN02057850
            IPI:IPI00584568 ProteinModelPortal:E1C240
            Ensembl:ENSGALT00000025475 Uniprot:E1C240
        Length = 388

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 75/107 (70%), Positives = 87/107 (81%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RF P+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   280 RFPPMTIDGMTSLAGINIPGHA--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 337

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKTNK
Sbjct:   338 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 384

 Score = 117 (46.2 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    70 IVNYLPQSMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPKDAEKAINTL 128

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   129 NGLRLQTKTIKVSY 142


>FB|FBgn0260400 [details] [associations]
            symbol:elav "embryonic lethal abnormal vision" species:7227
            "Drosophila melanogaster" [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0015030 "Cajal body" evidence=IDA] [GO:0007417 "central nervous
            system development" evidence=IMP] [GO:0016070 "RNA metabolic
            process" evidence=NAS] [GO:0003729 "mRNA binding" evidence=ISS;NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0008266
            "poly(U) RNA binding" evidence=IDA] [GO:0031441 "negative
            regulation of mRNA 3'-end processing" evidence=IDA] [GO:0003723
            "RNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0008266 GO:GO:0000166
            EMBL:AE014298 GO:GO:0003729 Gene3D:3.30.70.330 EMBL:AL022139
            GO:GO:0007417 GO:GO:0009790 GO:GO:0007281 GO:GO:0015030
            GO:GO:0000900 GO:GO:0031441 GO:GO:0007319 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 EMBL:M21152 EMBL:AY051822
            PIR:A33130 RefSeq:NP_001014713.1 RefSeq:NP_001138142.1
            RefSeq:NP_001245447.1 RefSeq:NP_525033.1 UniGene:Dm.4473
            ProteinModelPortal:P16914 SMR:P16914 DIP:DIP-23700N IntAct:P16914
            MINT:MINT-1597597 STRING:P16914 PaxDb:P16914 PRIDE:P16914
            EnsemblMetazoa:FBtr0070091 EnsemblMetazoa:FBtr0307173 GeneID:31000
            KEGG:dme:Dmel_CG4262 CTD:31000 FlyBase:FBgn0260400 eggNOG:NOG256997
            InParanoid:Q7K7L9 OMA:DIGESKT PhylomeDB:P16914 GenomeRNAi:31000
            NextBio:771397 Bgee:P16914 GermOnline:CG4262 Uniprot:P16914
        Length = 483

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 78/124 (62%), Positives = 98/124 (79%)

Query:     4 INKGLQRFSPLTGDLLASSILP---------ANTM-NGSG--WCIFVYNLAPETEESVLW 51
             +NKGL RFSP+ GD+L   +LP         A T+ +G G  + IF+YNLAPETEE+ LW
Sbjct:   361 VNKGLARFSPMAGDML-DVMLPNGLGAAAAAATTLASGPGGAYPIFIYNLAPETEEAALW 419

Query:    52 QLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKT 111
             QLFGPFGAVQSVK+++D  TN+CKG+GFV+MTNYDEA +AI++LNGY +GNR+LQVSFKT
Sbjct:   420 QLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKT 479

Query:   112 NKGK 115
             NK K
Sbjct:   480 NKAK 483


>UNIPROTKB|Q91903 [details] [associations]
            symbol:elavl2 "ELAV-like protein 2" species:8355 "Xenopus
            laevis" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005938 "cell cortex" evidence=IDA] [GO:0007399 "nervous system
            development" evidence=IMP] [GO:0008298 "intracellular mRNA
            localization" evidence=IMP] [GO:0017131 "uridine-rich cytoplasmic
            polyadenylylation element binding" evidence=IDA] [GO:0030529
            "ribonucleoprotein complex" evidence=IDA;IPI] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0051260 "protein homooligomerization" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005938 GO:GO:0007399 GO:GO:0000166
            GO:GO:0051260 Gene3D:3.30.70.330 GO:GO:0000122 GO:GO:0003730
            GO:GO:0030529 GO:GO:0008298 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
            HSSP:P26378 KO:K13208 EMBL:X85111 EMBL:U17597 EMBL:BC170539
            EMBL:BC094189 PIR:I51676 RefSeq:NP_001081035.1
            RefSeq:NP_001081613.1 UniGene:Xl.1648 UniGene:Xl.34955
            ProteinModelPortal:Q91903 SMR:Q91903 MINT:MINT-2880431
            GeneID:394342 GeneID:397952 KEGG:xla:394342 KEGG:xla:397952
            CTD:394342 CTD:397952 Xenbase:XB-GENE-6254447
            Xenbase:XB-GENE-866091 GO:GO:0017131 Uniprot:Q91903
        Length = 389

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 74/107 (69%), Positives = 86/107 (80%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D    LA    P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   281 RFSPMAIDGMTSLAGINFPGHA--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 338

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQVSFKT+K
Sbjct:   339 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 385

 Score = 109 (43.4 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 29/90 (32%), Positives = 46/90 (51%)

Query:    21 SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTN-KCKGFGF 79
             SS + +N    S   + V  L     +  L  LFG  G ++S K++RD  T  +  G+GF
Sbjct:    53 SSPVESNNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGF 112

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSF 109
             V   +  +A  AI +LNG  L  + ++VS+
Sbjct:   113 VNYIDPKDAEKAINTLNGLRLQTKTIKVSY 142


>UNIPROTKB|F1SA16 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:CU855518
            Ensembl:ENSSSCT00000014872 Uniprot:F1SA16
        Length = 367

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 74/108 (68%), Positives = 86/108 (79%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + + P     G GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   257 IARFSPIAIDGMSGLAGVGPVRGCGG-GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   316 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>UNIPROTKB|G3N063 [details] [associations]
            symbol:ELAVL2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RAVENGP EMBL:DAAA02022184
            EMBL:DAAA02022185 Ensembl:ENSBTAT00000065940 Uniprot:G3N063
        Length = 388

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 75/107 (70%), Positives = 87/107 (81%)

Query:    10 RFSPLTGD---LLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+T D    LA   +P +   G+GWCIFVYNLAP+ +ES+LWQ+FGPFGAV +VKVI
Sbjct:   281 RFSPMTIDGMTSLAGINIPGHP--GTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 338

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG+R+LQV FKTNK
Sbjct:   339 RDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQV-FKTNK 384

 Score = 116 (45.9 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LFG  G ++S K++RD  T +  G+GFV   +  +A  AI +L
Sbjct:    71 IVNYLPQNMTQEE-LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTL 129

Query:    96 NGYALGNRILQVSF 109
             NG  L  + ++VS+
Sbjct:   130 NGLRLQTKTIKVSY 143


>UNIPROTKB|F1N4V6 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:DAAA02019487
            IPI:IPI00710891 Ensembl:ENSBTAT00000019169 Uniprot:F1N4V6
        Length = 368

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + +  +    G+GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   257 IARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 316

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   317 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 364

 Score = 112 (44.5 bits), Expect = 6.5e-06, P = 6.5e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>UNIPROTKB|F1PVV1 [details] [associations]
            symbol:ELAVL3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:ARRYTGP EMBL:AAEX03012413
            Ensembl:ENSCAFT00000027494 Uniprot:F1PVV1
        Length = 367

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + +  +    G+GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   256 IARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   316 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>UNIPROTKB|Q14576 [details] [associations]
            symbol:ELAVL3 "ELAV-like protein 3" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IDA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007399 GO:GO:0030154
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            KO:K13208 EMBL:L26405 EMBL:AY036909 EMBL:AC008481 EMBL:BC014144
            EMBL:D26158 IPI:IPI00031552 IPI:IPI00140449 RefSeq:NP_001411.2
            RefSeq:NP_115657.2 UniGene:Hs.1701 ProteinModelPortal:Q14576
            SMR:Q14576 IntAct:Q14576 MINT:MINT-1471958 STRING:Q14576
            PhosphoSite:Q14576 DMDM:21264436 PaxDb:Q14576 PRIDE:Q14576
            Ensembl:ENST00000359227 Ensembl:ENST00000438662 GeneID:1995
            KEGG:hsa:1995 UCSC:uc002mrx.1 UCSC:uc002mry.1 CTD:1995
            GeneCards:GC19M011562 HGNC:HGNC:3314 HPA:CAB013066 MIM:603458
            neXtProt:NX_Q14576 PharmGKB:PA27742 InParanoid:Q14576 OMA:ARRYTGP
            PhylomeDB:Q14576 ChiTaRS:ELAVL3 GenomeRNAi:1995 NextBio:8067
            ArrayExpress:Q14576 Bgee:Q14576 CleanEx:HS_ELAVL3
            Genevestigator:Q14576 GermOnline:ENSG00000196361 Uniprot:Q14576
        Length = 367

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + +  +    G+GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   256 IARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   316 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>MGI|MGI:109157 [details] [associations]
            symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 3 (Hu antigen C)" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=ISO;IDA] [GO:0030154 "cell
            differentiation" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:109157 GO:GO:0007399 GO:GO:0030154 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 eggNOG:COG0724 HOVERGEN:HBG002295
            HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OMA:ARRYTGP
            ChiTaRS:ELAVL3 EMBL:U29148 EMBL:U29149 EMBL:BC052097
            IPI:IPI00122451 IPI:IPI00222990 RefSeq:NP_034617.1
            UniGene:Mm.390167 PDB:1D8Z PDB:1D9A PDB:1FNX PDBsum:1D8Z
            PDBsum:1D9A PDBsum:1FNX ProteinModelPortal:Q60900 SMR:Q60900
            STRING:Q60900 PhosphoSite:Q60900 PaxDb:Q60900 PRIDE:Q60900
            Ensembl:ENSMUST00000003501 GeneID:15571 KEGG:mmu:15571
            UCSC:uc009onl.2 UCSC:uc009onn.1 InParanoid:Q60900 OrthoDB:EOG43R3N0
            EvolutionaryTrace:Q60900 NextBio:288556 Bgee:Q60900
            Genevestigator:Q60900 GermOnline:ENSMUSG00000003410 Uniprot:Q60900
        Length = 367

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + +  +    G+GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   256 IARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   316 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>RGD|628892 [details] [associations]
            symbol:Elavl3 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 3 (Hu antigen C)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:628892 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 HSSP:P19339 eggNOG:COG0724 EMBL:CH473993
            HOVERGEN:HBG002295 HOGENOM:HOG000231162 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 KO:K13208 CTD:1995 OrthoDB:EOG43R3N0
            EMBL:AB097198 IPI:IPI00192527 RefSeq:NP_758827.1 UniGene:Rn.22586
            SMR:Q76IJ9 STRING:Q76IJ9 Ensembl:ENSRNOT00000018416 GeneID:282824
            KEGG:rno:282824 UCSC:RGD:628892 InParanoid:Q76IJ9 NextBio:624869
            Genevestigator:Q76IJ9 Uniprot:Q76IJ9
        Length = 367

 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 73/108 (67%), Positives = 87/108 (80%)

Query:     8 LQRFSPLTGDLLA--SSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKV 65
             + RFSP+  D ++  + +  +    G+GWCIFVYNL+PE +ESVLWQLFGPFGAV +VKV
Sbjct:   256 IARFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKV 315

Query:    66 IRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             IRD  TNKCKGFGFVTMTNYDEA +AI SLNGY LG R+LQVSFKT+K
Sbjct:   316 IRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

 Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
 Identities = 24/73 (32%), Positives = 42/73 (57%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +     LFG  G ++S K++RD  T +  G+GFV  ++ ++A  AI +LN
Sbjct:    42 IVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101

Query:    97 GYALGNRILQVSF 109
             G  L  + ++VS+
Sbjct:   102 GLKLQTKTIKVSY 114


>MGI|MGI:1100851 [details] [associations]
            symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision)-like
            1 (Hu antigen R)" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006417 "regulation of translation" evidence=ISO] [GO:0017091
            "AU-rich element binding" evidence=ISO] [GO:0019901 "protein kinase
            binding" evidence=ISO] [GO:0035925 "mRNA 3'-UTR AU-rich region
            binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=ISO;IMP;IDA] [GO:0048255 "mRNA stabilization"
            evidence=ISO;IMP] [GO:0070935 "3'-UTR-mediated mRNA stabilization"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1100851 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091
            GO:GO:0045727 EMBL:CH466566 eggNOG:COG0724 GO:GO:0070935
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:U65735 EMBL:AK080365
            EMBL:U17595 IPI:IPI00108271 PIR:I49144 RefSeq:NP_034615.2
            UniGene:Mm.119162 HSSP:P26378 ProteinModelPortal:P70372 SMR:P70372
            DIP:DIP-46480N MINT:MINT-4094207 STRING:P70372 PhosphoSite:P70372
            PaxDb:P70372 PRIDE:P70372 Ensembl:ENSMUST00000098950 GeneID:15568
            KEGG:mmu:15568 GeneTree:ENSGT00560000077064 InParanoid:P70372
            OMA:YANRACA ChiTaRS:ELAVL1 NextBio:288542 Bgee:P70372
            Genevestigator:P70372 GermOnline:ENSMUSG00000040028 Uniprot:P70372
        Length = 326

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGISGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 108 (43.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 27/74 (36%), Positives = 40/74 (54%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LF   G V+S K+IRD       G+GFV      +A  AI +L
Sbjct:    23 IVNYLPQNMTQEE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81

Query:    96 NGYALGNRILQVSF 109
             NG  L ++ ++VS+
Sbjct:    82 NGLRLQSKTIKVSY 95


>RGD|1308649 [details] [associations]
            symbol:Elavl1 "ELAV (embryonic lethal, abnormal vision,
            Drosophila)-like 1 (Hu antigen R)" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006417 "regulation of
            translation" evidence=ISO] [GO:0017091 "AU-rich element binding"
            evidence=ISO] [GO:0019901 "protein kinase binding" evidence=ISO]
            [GO:0035925 "mRNA 3'-UTR AU-rich region binding" evidence=ISO]
            [GO:0045727 "positive regulation of translation" evidence=IEA;ISO]
            [GO:0048255 "mRNA stabilization" evidence=ISO] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 RGD:1308649 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003730 eggNOG:COG0724 HOVERGEN:HBG002295 CTD:1994
            HOGENOM:HOG000231162 KO:K13088 OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:CH474084
            EMBL:BC168972 EMBL:AB212679 IPI:IPI00869767 RefSeq:NP_001102318.1
            UniGene:Rn.216517 SMR:B5DF91 STRING:B5DF91
            Ensembl:ENSRNOT00000001415 GeneID:363854 KEGG:rno:363854
            UCSC:RGD:1308649 NextBio:684342 Genevestigator:B5DF91
            Uniprot:B5DF91
        Length = 326

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGISGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 108 (43.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 27/74 (36%), Positives = 40/74 (54%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LF   G V+S K+IRD       G+GFV      +A  AI +L
Sbjct:    23 IVNYLPQNMTQEE-LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAISTL 81

Query:    96 NGYALGNRILQVSF 109
             NG  L ++ ++VS+
Sbjct:    82 NGLRLQSKTIKVSY 95


>UNIPROTKB|F1N9I5 [details] [associations]
            symbol:ELAVL1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727 GO:GO:0070935
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
            EMBL:AADN02063542 IPI:IPI00590347 ProteinModelPortal:F1N9I5
            Ensembl:ENSGALT00000001029 Uniprot:F1N9I5
        Length = 326

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 106 (42.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV      +A  AI +LN
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLN 82

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:    83 GLRLQSKTIKVSY 95


>UNIPROTKB|Q3ZCE2 [details] [associations]
            symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
            Drosophila)-like 1 (Hu antigen R)" species:9913 "Bos taurus"
            [GO:0070935 "3'-UTR-mediated mRNA stabilization" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0019901 "protein kinase binding" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0045727 eggNOG:COG0724 GO:GO:0070935
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064
            OMA:RFGGPLH EMBL:DAAA02019508 EMBL:DAAA02019509 EMBL:BC102495
            IPI:IPI00703347 RefSeq:NP_001069922.1 UniGene:Bt.49576 SMR:Q3ZCE2
            STRING:Q3ZCE2 Ensembl:ENSBTAT00000000805 GeneID:617316
            KEGG:bta:617316 InParanoid:Q3ZCE2 NextBio:20900599 Uniprot:Q3ZCE2
        Length = 326

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 106 (42.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV      +A  AI +LN
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLN 82

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:    83 GLRLQSKTIKVSY 95


>UNIPROTKB|F1PSC4 [details] [associations]
            symbol:ELAVL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 OMA:RFGGPLH EMBL:AAEX03012469
            Ensembl:ENSCAFT00000029161 Uniprot:F1PSC4
        Length = 334

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   227 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 284

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   285 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 331

 Score = 106 (42.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV      +A  AI +LN
Sbjct:    31 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLN 90

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:    91 GLRLQSKTIKVSY 103


>UNIPROTKB|B4DVB8 [details] [associations]
            symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006417 "regulation of translation"
            evidence=IMP] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 HOVERGEN:HBG002295 UniGene:Hs.184492
            UniGene:Hs.713744 HGNC:HGNC:3312 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 EMBL:AC010336 EMBL:AC008975 EMBL:AK301013
            IPI:IPI00301936 ProteinModelPortal:B4DVB8 SMR:B4DVB8 IntAct:B4DVB8
            STRING:B4DVB8 PRIDE:B4DVB8 Ensembl:ENST00000351593 OMA:RFGGPLH
            ArrayExpress:B4DVB8 Bgee:B4DVB8 Uniprot:B4DVB8
        Length = 353

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   246 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 303

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   304 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 350

 Score = 106 (42.4 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV      +A  AI +LN
Sbjct:    50 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLN 109

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:   110 GLRLQSKTIKVSY 122


>UNIPROTKB|Q15717 [details] [associations]
            symbol:ELAVL1 "ELAV-like protein 1" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IDA;IMP] [GO:0048255
            "mRNA stabilization" evidence=IDA;IMP] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0035925
            "mRNA 3'-UTR AU-rich region binding" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0003729
            "mRNA binding" evidence=TAS] [GO:0007275 "multicellular organismal
            development" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
            [GO:0016071 "mRNA metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0007275 GO:GO:0005829 GO:GO:0010467 GO:GO:0016071
            GO:GO:0005654 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0017091 EMBL:CH471139 GO:GO:0045727 eggNOG:COG0724
            GO:GO:0070935 HOVERGEN:HBG002295 EMBL:U38175 EMBL:BT009793
            EMBL:BC003376 IPI:IPI00940851 RefSeq:NP_001410.2 UniGene:Hs.184492
            UniGene:Hs.713744 PDB:3HI9 PDB:4ED5 PDB:4EGL PDB:4FXV PDBsum:3HI9
            PDBsum:4ED5 PDBsum:4EGL PDBsum:4FXV ProteinModelPortal:Q15717
            SMR:Q15717 IntAct:Q15717 MINT:MINT-5001300 STRING:Q15717
            PhosphoSite:Q15717 DMDM:20981691 PaxDb:Q15717 PeptideAtlas:Q15717
            PRIDE:Q15717 DNASU:1994 Ensembl:ENST00000407627 GeneID:1994
            KEGG:hsa:1994 UCSC:uc002mjb.3 CTD:1994 GeneCards:GC19M008023
            HGNC:HGNC:3312 HPA:CAB005256 MIM:603466 neXtProt:NX_Q15717
            PharmGKB:PA27740 HOGENOM:HOG000231162 InParanoid:Q15717 KO:K13088
            OrthoDB:EOG4Z8XWZ PhylomeDB:Q15717 BindingDB:Q15717
            ChEMBL:CHEMBL1250379 EvolutionaryTrace:Q15717 GenomeRNAi:1994
            NextBio:8063 ArrayExpress:Q15717 Bgee:Q15717 CleanEx:HS_ELAVL1
            Genevestigator:Q15717 GermOnline:ENSG00000066044 TIGRFAMs:TIGR01661
            Uniprot:Q15717
        Length = 326

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 106 (42.4 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 25/73 (34%), Positives = 38/73 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV      +A  AI +LN
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLN 82

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:    83 GLRLQSKTIKVSY 95


>UNIPROTKB|D3K5N7 [details] [associations]
            symbol:ELAVL1 "ELAV (Embryonic lethal, abnormal vision,
            Drosophila)-like 1" species:9823 "Sus scrofa" [GO:0070935
            "3'-UTR-mediated mRNA stabilization" evidence=IEA] [GO:0045727
            "positive regulation of translation" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0017091 "AU-rich element
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR006548 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0045727
            GO:GO:0070935 CTD:1994 KO:K13088 OrthoDB:EOG4Z8XWZ
            TIGRFAMs:TIGR01661 GeneTree:ENSGT00560000077064 OMA:RFGGPLH
            EMBL:CU929699 EMBL:GU373715 RefSeq:NP_001182263.1 UniGene:Ssc.4516
            ProteinModelPortal:D3K5N7 Ensembl:ENSSSCT00000014844
            GeneID:100337681 KEGG:ssc:100337681 Uniprot:D3K5N7
        Length = 326

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 70/107 (65%), Positives = 85/107 (79%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP+  D ++  S + +P N    SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   219 RFSPMGVDHMSGLSGVNVPGNA--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 276

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ILQVSFKTNK
Sbjct:   277 RDFNTNKCKGFGFVTMTNYEEASMAIASLNGYRLGDKILQVSFKTNK 323

 Score = 107 (42.7 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 26/74 (35%), Positives = 40/74 (54%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E  L  LF   G ++S K+IRD       G+GFV      +A  AI +L
Sbjct:    23 IVNYLPQNMTQEE-LRSLFSSIGEIESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 81

Query:    96 NGYALGNRILQVSF 109
             NG  L ++ ++VS+
Sbjct:    82 NGLRLQSKTIKVSY 95


>ZFIN|ZDB-GENE-000210-17 [details] [associations]
            symbol:hug "HuG" species:7955 "Danio rerio"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-000210-17 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:CR550302 IPI:IPI00998450
            ProteinModelPortal:F1QUX1 Ensembl:ENSDART00000122728
            ArrayExpress:F1QUX1 Bgee:F1QUX1 Uniprot:F1QUX1
        Length = 368

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 67/104 (64%), Positives = 86/104 (82%)

Query:    10 RFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDL 69
             RFSP++ D   SS+  A++ + SGWCIFVYNL  + +E +LWQ+FGPFGAV +VKVIRD 
Sbjct:   263 RFSPMSVDHSVSSMNVASS-SSSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDF 321

Query:    70 QTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
              T+KCKGFGFVTMTNY+EA +AI SLNGY LG+++LQVSFK++K
Sbjct:   322 NTSKCKGFGFVTMTNYEEAAMAISSLNGYRLGDKVLQVSFKSSK 365

 Score = 93 (37.8 bits), Expect = 0.00074, P = 0.00074
 Identities = 26/81 (32%), Positives = 39/81 (48%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCK--------GFGFVTMTNYDEA 88
             + N  P+   +  L  LF   G V+S K+IRD               G+GFV   N  +A
Sbjct:    59 IINYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGMSAHHTLGHSLGYGFVNYVNPSDA 118

Query:    89 VVAIQSLNGYALGNRILQVSF 109
               AI +LNG  L ++ ++VS+
Sbjct:   119 ERAINTLNGLRLQSKTIKVSY 139


>UNIPROTKB|Q1JQ73 [details] [associations]
            symbol:elavl1-a "ELAV-like protein 1-A" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
            "cell cortex" evidence=IDA] [GO:0007369 "gastrulation"
            evidence=IMP] [GO:0008266 "poly(U) RNA binding" evidence=IDA]
            [GO:0008298 "intracellular mRNA localization" evidence=IMP]
            [GO:0030529 "ribonucleoprotein complex" evidence=IDA;IPI]
            [GO:0031440 "regulation of mRNA 3'-end processing" evidence=IC]
            [GO:0048255 "mRNA stabilization" evidence=IC;IGI] [GO:0051259
            "protein oligomerization" evidence=IDA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
            GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 TIGRFAMs:TIGR01661
            KO:K13208 EMBL:U17596 EMBL:BC116459 PIR:I51675
            RefSeq:NP_001084078.1 UniGene:Xl.49136 ProteinModelPortal:Q1JQ73
            SMR:Q1JQ73 MINT:MINT-274235 PRIDE:Q1JQ73 GeneID:399292
            KEGG:xla:399292 CTD:399292 Xenbase:XB-GENE-6254178 GO:GO:0031440
            Uniprot:Q1JQ73
        Length = 337

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 70/106 (66%), Positives = 83/106 (78%)

Query:    10 RFSPLTGDLLASSILPANTMNG--SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIR 67
             RFSP+  D + SSI   N  +   SGWCIFVYNL  + +E +LWQ+FGPFGAV +VKVIR
Sbjct:   230 RFSPMGVDHM-SSISSVNVASSATSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIR 288

Query:    68 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             D  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ LQVSFKT+K
Sbjct:   289 DFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSFKTSK 334

 Score = 92 (37.4 bits), Expect = 0.00084, P = 0.00084
 Identities = 28/84 (33%), Positives = 40/84 (47%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRD-----------LQTNKCKGFGFVTMTNY 85
             + N  P+   +  L  LF   G V+S K+IRD           L      G+GFV   N 
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGFEMRSSSLSKGHSLGYGFVNYLNA 82

Query:    86 DEAVVAIQSLNGYALGNRILQVSF 109
              +A  AI +LNG  L ++ ++VSF
Sbjct:    83 KDAERAINTLNGLRLQSKTIKVSF 106


>UNIPROTKB|Q5U259 [details] [associations]
            symbol:elavl1-b "ELAV-like protein 1-B" species:8355
            "Xenopus laevis" [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007369
            "gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA binding"
            evidence=ISS] [GO:0008298 "intracellular mRNA localization"
            evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0051259 "protein
            oligomerization" evidence=ISS] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005938 GO:GO:0005634 GO:GO:0008266 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0030529
            GO:GO:0008298 GO:GO:0007369 HOVERGEN:HBG002295 KO:K13088
            TIGRFAMs:TIGR01661 EMBL:BC086269 RefSeq:NP_001088628.1
            UniGene:Xl.22886 ProteinModelPortal:Q5U259 SMR:Q5U259 PRIDE:Q5U259
            GeneID:495680 KEGG:xla:495680 CTD:495680 Xenbase:XB-GENE-865489
            Uniprot:Q5U259
        Length = 326

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 69/106 (65%), Positives = 83/106 (78%)

Query:    10 RFSPLTGDLLASSILPANTMNG--SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIR 67
             RFSP+  D + SSI   N  +   SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVIR
Sbjct:   219 RFSPMGVDHM-SSISSVNVASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277

Query:    68 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             D  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ LQVSFKT+K
Sbjct:   278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSFKTSK 323

 Score = 116 (45.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 28/80 (35%), Positives = 41/80 (51%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV   N  +A  AI +LN
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLN 82

Query:    97 GYALGNRILQVSFKTNKGKT 116
             G  L ++ ++VSF     +T
Sbjct:    83 GLRLQSKTIKVSFARPSSET 102


>ZFIN|ZDB-GENE-990415-245 [details] [associations]
            symbol:elavl1 "ELAV (embryonic lethal, abnormal
            vision, Drosophila)-like 1 (Hu antigen R)" species:7955 "Danio
            rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-990415-245 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01661
            GeneTree:ENSGT00560000077064 EMBL:BX649372 IPI:IPI00817195
            PRIDE:F1QM02 Ensembl:ENSDART00000146123 ArrayExpress:F1QM02
            Bgee:F1QM02 Uniprot:F1QM02
        Length = 340

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 68/107 (63%), Positives = 87/107 (81%)

Query:    10 RFSPLTGDLLA--SSI-LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             RFSP++ D ++  S + +P N+   SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVI
Sbjct:   233 RFSPMSVDHMSGMSGVNVPGNS--SSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVI 290

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             RD  TNKCKGFGFVTMT+Y+EA +AI SLNGY LG++ILQVSFKT+K
Sbjct:   291 RDFNTNKCKGFGFVTMTHYEEAAMAIASLNGYRLGDKILQVSFKTSK 337

 Score = 113 (44.8 bits), Expect = 4.4e-06, P = 4.4e-06
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV   N ++A  AI +LN
Sbjct:    37 IVNYLPQNMSQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNPNDAERAISTLN 96

Query:    97 GYALGNRILQVSF 109
             G  L ++ ++VS+
Sbjct:    97 GLRLQSKTIKVSY 109


>UNIPROTKB|Q6GLB5 [details] [associations]
            symbol:elavl1 "ELAV-like protein 1" species:8364 "Xenopus
            (Silurana) tropicalis" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005938 "cell cortex" evidence=ISS]
            [GO:0007369 "gastrulation" evidence=ISS] [GO:0008266 "poly(U) RNA
            binding" evidence=ISS] [GO:0008298 "intracellular mRNA
            localization" evidence=ISS] [GO:0030529 "ribonucleoprotein complex"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0051259 "protein oligomerization" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR006548
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005938 GO:GO:0005634 GO:GO:0008266
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0030529 GO:GO:0008298 GO:GO:0007369 eggNOG:COG0724
            HOVERGEN:HBG002295 CTD:1994 HOGENOM:HOG000231162 KO:K13088
            OrthoDB:EOG4Z8XWZ TIGRFAMs:TIGR01661 EMBL:BC074585
            RefSeq:NP_001005461.1 UniGene:Str.2596 ProteinModelPortal:Q6GLB5
            SMR:Q6GLB5 STRING:Q6GLB5 PRIDE:Q6GLB5 GeneID:448062 KEGG:xtr:448062
            Xenbase:XB-GENE-481800 InParanoid:Q6GLB5 Uniprot:Q6GLB5
        Length = 326

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 68/106 (64%), Positives = 82/106 (77%)

Query:    10 RFSPLTGDLLASSILPANTMNG--SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIR 67
             RFSP+  D + SSI   N  +   SGWCIF+YNL  + +E +LWQ+FGPFGAV +VKVIR
Sbjct:   219 RFSPMGVDHM-SSISGVNVASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIR 277

Query:    68 DLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             D  TNKCKGFGFVTMTNY+EA +AI SLNGY LG++ LQV FKT+K
Sbjct:   278 DFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVFFKTSK 323

 Score = 108 (43.1 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 26/72 (36%), Positives = 38/72 (52%)

Query:    38 VYNLAPET-EESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             + N  P+   +  L  LF   G V+S K+IRD       G+GFV   N  +A  AI +LN
Sbjct:    23 IVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLN 82

Query:    97 GYALGNRILQVS 108
             G  L ++ ++VS
Sbjct:    83 GLRLQSKTIKVS 94


>UNIPROTKB|F1PPC3 [details] [associations]
            symbol:F1PPC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GeneTree:ENSGT00560000077064 EMBL:AAEX03002929
            ProteinModelPortal:F1PPC3 Ensembl:ENSCAFT00000037406 Uniprot:F1PPC3
        Length = 335

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 59/101 (58%), Positives = 73/101 (72%)

Query:    10 RFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDL 69
             RFSP+  D    S +       SGWCIF+YNL  +T E +LWQ+FGPFGAV +VKVIRD 
Sbjct:   228 RFSPVGVDTSGLSGVSVLGDASSGWCIFIYNLGRDTHEGILWQMFGPFGAVTNVKVIRDF 287

Query:    70 QTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFK 110
              TNK KGFGFVTMTN++EA +A+ SLN   LG++IL +SFK
Sbjct:   288 STNKHKGFGFVTMTNHEEAAMAVASLNSSRLGDKILFISFK 328


>WB|WBGene00001368 [details] [associations]
            symbol:exc-7 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0002064 "epithelial cell development"
            evidence=IMP] [GO:0035150 "regulation of tube size" evidence=IMP]
            [GO:0016607 "nuclear speck" evidence=IDA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR006548 InterPro:IPR012677
            Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330 GO:GO:0003723
            GO:GO:0002064 eggNOG:COG0724 HOGENOM:HOG000231162
            TIGRFAMs:TIGR01661 HSSP:P26378 GeneTree:ENSGT00560000077064
            OMA:DIGESKT GO:GO:0035150 EMBL:Z36752 PIR:T21822 RefSeq:NP_496057.1
            ProteinModelPortal:Q20084 SMR:Q20084 DIP:DIP-27011N IntAct:Q20084
            MINT:MINT-1038844 STRING:Q20084 PaxDb:Q20084 EnsemblMetazoa:F35H8.5
            GeneID:174506 KEGG:cel:CELE_F35H8.5 CTD:174506 WormBase:F35H8.5
            InParanoid:Q20084 NextBio:884320 Uniprot:Q20084
        Length = 456

 Score = 245 (91.3 bits), Expect = 3.0e-20, P = 3.0e-20
 Identities = 46/94 (48%), Positives = 73/94 (77%)

Query:    19 LASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFG 78
             +A+++ P++T   +G+C+FVYNL+ +T++++LWQLF  FGA+ +VK++RDL T +CKG+ 
Sbjct:   362 VAATLPPSDT---AGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDL-TQQCKGYA 417

Query:    79 FVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTN 112
             FV+M+NY EA  A+ SLNG  L  + LQV FK++
Sbjct:   418 FVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451

 Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 26/74 (35%), Positives = 43/74 (58%)

Query:    38 VYNLAPE--TEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + N  P+  T+E V   LF   G ++S K++RD  T +  G+GFV     ++A+ A+ S 
Sbjct:    45 IINYLPQGMTQEEVR-SLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103

Query:    96 NGYALGNRILQVSF 109
             NG  L N+ ++VS+
Sbjct:   104 NGLRLQNKTIKVSY 117

 Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
 Identities = 26/74 (35%), Positives = 39/74 (52%)

Query:    25 PANT-MNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMT 83
             P+N  + GS   ++V  +        L  +F PFG + + +++ D  T   KG GFV   
Sbjct:   120 PSNDQIKGSN--LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFD 177

Query:    84 NYDEAVVAIQSLNG 97
               DEA VAI++LNG
Sbjct:   178 KKDEADVAIKTLNG 191


>DICTYBASE|DDB_G0290307 [details] [associations]
            symbol:DDB_G0290307 "ELAVL1-like protein"
            species:44689 "Dictyostelium discoideum" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0290307 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AAFI02000162 eggNOG:NOG256997 RefSeq:XP_635793.1
            ProteinModelPortal:Q54G90 EnsemblProtists:DDB0233651 GeneID:8627598
            KEGG:ddi:DDB_G0290307 InParanoid:Q54G90 OMA:SATNQCK Uniprot:Q54G90
        Length = 459

 Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 33/75 (44%), Positives = 53/75 (70%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++VYNL  + ++S+L++LF P GA+ SVK++RD  T  C+G+GFV M +  ++  AI S+
Sbjct:   384 LYVYNLPSDADDSLLYRLFSPCGAIASVKIVRDQTTQVCRGYGFVRMVSLADSYSAINSI 443

Query:    96 NGYALGNRILQVSFK 110
             NG  +G + + VSFK
Sbjct:   444 NGVQVGGKTISVSFK 458

 Score = 116 (45.9 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 31/90 (34%), Positives = 46/90 (51%)

Query:    21 SSILPANTMNGSGWCIFVYNLAPETEES-VLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             S+   +N+ N     +F+ +  P T  S  L  +F  FG + S +V+ DL T   +GFGF
Sbjct:    88 STSTSSNSANSGN--LFI-SFLPATYTSDTLRSIFSAFGEIDSCRVMVDLNTGLSRGFGF 144

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSF 109
             V   +   A  AI S+NG  + N+ L V F
Sbjct:   145 VKFKDVASAQYAINSMNGAKVENKTLLVRF 174

 Score = 107 (42.7 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 26/80 (32%), Positives = 45/80 (56%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L  E +++ L +LF  +G V   K++ D+ TN  +G G V   +   A+ A++SL
Sbjct:   221 VFIRGLPIEFDKNQLSELFSAYGEVVESKLLIDITTNASRGQGLVRYIDTQSAINAVKSL 280

Query:    96 NGYALGN--RILQVSFKTNK 113
             NG+ L +  + L V F  N+
Sbjct:   281 NGFILQDPEKPLIVRFADNE 300


>UNIPROTKB|E2RJG5 [details] [associations]
            symbol:CELF6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 OMA:MQHVAAF EMBL:AAEX03016277
            EMBL:AAEX03016278 Ensembl:ENSCAFT00000028069 Uniprot:E2RJG5
        Length = 427

 Score = 174 (66.3 bits), Expect = 1.5e-12, P = 1.5e-12
 Identities = 41/94 (43%), Positives = 54/94 (57%)

Query:    21 SSILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             SS LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGF
Sbjct:   328 SSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGF 387

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   388 VSFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 421


>DICTYBASE|DDB_G0274523 [details] [associations]
            symbol:DDB_G0274523 "RNA recognition motif-containing
            protein RRM" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0274523 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AAFI02000012 eggNOG:COG0724
            RefSeq:XP_644081.1 ProteinModelPortal:Q86HL7 PRIDE:Q86HL7
            EnsemblProtists:DDB0233759 GeneID:8619510 KEGG:ddi:DDB_G0274523
            InParanoid:Q86HL7 OMA:QNNHHDP Uniprot:Q86HL7
        Length = 904

 Score = 179 (68.1 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 40/109 (36%), Positives = 66/109 (60%)

Query:     8 LQRFSPLTGDLLASSILPANTMNG---SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVK 64
             L+  +PL+    +SS + +N+  G   +   +FV++L P  ++S L+QLF  FG +QSV+
Sbjct:   743 LESLNPLSA---SSSSITSNSGGGKHTNDTNLFVFHLPPFVDDSYLFQLFSQFGKLQSVR 799

Query:    65 VIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             VI D  T + KG+GFV     DEA+   + +NG+ +G++ L+V  K  K
Sbjct:   800 VITDKDTGENKGYGFVKFYQTDEALKCQKEMNGFRIGSKFLKVKLKNEK 848

 Score = 102 (41.0 bits), Expect = 0.00026, P = 0.00026
 Identities = 26/70 (37%), Positives = 39/70 (55%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L  E  +  L  LF  +G V S KV+ D + N   G+GFV  ++  E+  AI+ L
Sbjct:   111 VFVKHLPYEFNDEDLENLFSKYGKVLSSKVMIDPKGNSY-GYGFVRFSSPQESAAAIEEL 169

Query:    96 NGYALGNRIL 105
             +GY   N+ L
Sbjct:   170 DGYQYQNKKL 179


>UNIPROTKB|B3KWE6 [details] [associations]
            symbol:BRUNOL6 "cDNA FLJ42868 fis, clone BRHIP2021615,
            highly similar to Homo sapiens bruno-like 6, RNA binding protein,
            mRNA" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471082 HOVERGEN:HBG107646 HOGENOM:HOG000004754 EMBL:AC009690
            UniGene:Hs.348342 HGNC:HGNC:14059 EMBL:AK124858 IPI:IPI01012509
            SMR:B3KWE6 STRING:B3KWE6 Ensembl:ENST00000539635 Uniprot:B3KWE6
        Length = 342

 Score = 170 (64.9 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   244 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 303

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   304 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 336


>MGI|MGI:1923433 [details] [associations]
            symbol:Celf6 "CUGBP, Elav-like family member 6"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:1923433 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
            HOVERGEN:HBG107646 KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754
            GeneTree:ENSGT00560000076837 GO:GO:0000381 OrthoDB:EOG4RJG30
            CTD:60677 EMBL:AK034216 EMBL:BC052406 EMBL:BC057083 IPI:IPI00222250
            IPI:IPI00853853 RefSeq:NP_780444.2 UniGene:Mm.265415
            ProteinModelPortal:Q7TN33 SMR:Q7TN33 PhosphoSite:Q7TN33
            PRIDE:Q7TN33 Ensembl:ENSMUST00000034840 Ensembl:ENSMUST00000121266
            GeneID:76183 KEGG:mmu:76183 UCSC:uc009pxx.1 UCSC:uc009pxy.1
            NextBio:344727 Bgee:Q7TN33 CleanEx:MM_BRUNOL6 Genevestigator:Q7TN33
            Uniprot:Q7TN33
        Length = 460

 Score = 170 (64.9 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   362 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 421

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   422 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 454


>RGD|1310451 [details] [associations]
            symbol:Celf6 "CUGBP, Elav-like family member 6" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA;ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1310451 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 GO:GO:0000381 OrthoDB:EOG4RJG30
            OMA:MQHVAAF IPI:IPI00369994 Ensembl:ENSRNOT00000014450
            UCSC:RGD:1310451 Uniprot:D4ABS9
        Length = 460

 Score = 170 (64.9 bits), Expect = 4.9e-12, P = 4.9e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   362 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 421

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   422 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 454


>UNIPROTKB|Q96J87 [details] [associations]
            symbol:CELF6 "CUGBP Elav-like family member 6" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
            evidence=NAS] [GO:0005737 "cytoplasm" evidence=NAS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HOVERGEN:HBG107646
            KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754 GO:GO:0000381
            OrthoDB:EOG4RJG30 EMBL:AF401233 EMBL:AF425606 EMBL:AK131098
            EMBL:AK294382 EMBL:AK296004 EMBL:AC009690 EMBL:BC030835
            EMBL:BC033838 IPI:IPI00171103 IPI:IPI00793692 IPI:IPI00909307
            IPI:IPI00922660 RefSeq:NP_001166155.1 RefSeq:NP_001166156.1
            RefSeq:NP_443072.3 UniGene:Hs.348342 PDB:2DGQ PDBsum:2DGQ
            ProteinModelPortal:Q96J87 SMR:Q96J87 STRING:Q96J87
            PhosphoSite:Q96J87 DMDM:74760888 PRIDE:Q96J87
            Ensembl:ENST00000287202 Ensembl:ENST00000395258
            Ensembl:ENST00000543764 Ensembl:ENST00000567083
            Ensembl:ENST00000569547 GeneID:60677 KEGG:hsa:60677 UCSC:uc002auh.2
            UCSC:uc002auj.2 CTD:60677 GeneCards:GC15M072577 H-InvDB:HIX0012406
            HGNC:HGNC:14059 MIM:612681 neXtProt:NX_Q96J87 PharmGKB:PA25430
            InParanoid:Q96J87 OMA:MQHVAAF PhylomeDB:Q96J87
            EvolutionaryTrace:Q96J87 GenomeRNAi:60677 NextBio:65492
            ArrayExpress:Q96J87 Bgee:Q96J87 CleanEx:HS_BRUNOL6
            Genevestigator:Q96J87 Uniprot:Q96J87
        Length = 481

 Score = 170 (64.9 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   383 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 442

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   443 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 475


>UNIPROTKB|E1B8K2 [details] [associations]
            symbol:CELF6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 GO:GO:0000381 OMA:MQHVAAF
            EMBL:DAAA02027998 IPI:IPI00694457 ProteinModelPortal:E1B8K2
            Ensembl:ENSBTAT00000018735 Uniprot:E1B8K2
        Length = 482

 Score = 170 (64.9 bits), Expect = 5.4e-12, P = 5.4e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   384 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 443

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   444 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 476


>UNIPROTKB|F1SHM1 [details] [associations]
            symbol:CELF6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 GO:GO:0000381 OMA:MQHVAAF
            EMBL:CU012037 Ensembl:ENSSSCT00000002157 Uniprot:F1SHM1
        Length = 482

 Score = 170 (64.9 bits), Expect = 5.4e-12, P = 5.4e-12
 Identities = 40/93 (43%), Positives = 53/93 (56%)

Query:    22 SILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFV 80
             S LP     G   C +F+Y+L  E  ++ L Q F PFGAV S KV  D  TN+ K FGFV
Sbjct:   384 SALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFV 443

Query:    81 TMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             +  N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   444 SFDNPTSAQTAIQAMNGFQIGMKRLKVQLKRPK 476


>UNIPROTKB|F1P5J4 [details] [associations]
            symbol:BRUNOL6 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 EMBL:AADN02051058 EMBL:AADN02051059
            IPI:IPI00591656 Ensembl:ENSGALT00000003051 Uniprot:F1P5J4
        Length = 354

 Score = 166 (63.5 bits), Expect = 7.3e-12, P = 7.3e-12
 Identities = 38/92 (41%), Positives = 53/92 (57%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             I+P     G   C +F+Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   257 IIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVS 316

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   317 FDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPK 348


>UNIPROTKB|B4DQL3 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107646
            HOGENOM:HOG000004754 EMBL:AL589765 UniGene:Hs.26047 HGNC:HGNC:11967
            EMBL:AK298852 IPI:IPI00909704 SMR:B4DQL3 STRING:B4DQL3
            Ensembl:ENST00000392706 UCSC:uc010pdh.2 Uniprot:B4DQL3
        Length = 260

 Score = 161 (61.7 bits), Expect = 7.9e-12, P = 7.9e-12
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   171 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 230

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   231 AAIQAMNGFQIGMKRLKVQLKRPK 254


>ZFIN|ZDB-GENE-040718-300 [details] [associations]
            symbol:celf4 "CUGBP, Elav-like family member 4"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040718-300 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
            HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026 eggNOG:NOG251494
            HOGENOM:HOG000004754 OrthoDB:EOG4RJG30 EMBL:BC076238
            IPI:IPI00491989 RefSeq:NP_001002562.1 UniGene:Dr.81398
            ProteinModelPortal:Q6DGV1 SMR:Q6DGV1 GeneID:436835 KEGG:dre:436835
            CTD:56853 InParanoid:Q6DGV1 NextBio:20831267 ArrayExpress:Q6DGV1
            Bgee:Q6DGV1 Uniprot:Q6DGV1
        Length = 520

 Score = 167 (63.8 bits), Expect = 1.3e-11, P = 1.3e-11
 Identities = 39/92 (42%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             I+P     G   C +F+Y+L  E  +  L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   423 IIPQQQREGPEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSKCFGFVS 482

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQS+NG+ +G + L+V  K  K
Sbjct:   483 FDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPK 514


>UNIPROTKB|F1RUN0 [details] [associations]
            symbol:CELF2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006376 "mRNA splice site selection" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0006376
            GeneTree:ENSGT00560000076837 EMBL:CU896684
            Ensembl:ENSSSCT00000012171 OMA:PANNENR Uniprot:F1RUN0
        Length = 236

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 42/114 (36%), Positives = 62/114 (54%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L      GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   117 GIQQYAAAALPTLYSQSLLQQQGAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 176

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   177 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 230


>UNIPROTKB|F1NYP4 [details] [associations]
            symbol:CELF4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 OMA:EDSEKNG EMBL:AADN02067588
            EMBL:AADN02067589 EMBL:AADN02067590 EMBL:AADN02067591
            EMBL:AADN02067592 EMBL:AADN02067593 EMBL:AADN02067594
            EMBL:AADN02067595 EMBL:AADN02067596 IPI:IPI00590965
            Ensembl:ENSGALT00000003800 Uniprot:F1NYP4
        Length = 361

 Score = 161 (61.7 bits), Expect = 2.7e-11, P = 2.7e-11
 Identities = 37/92 (40%), Positives = 53/92 (57%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             ++P     G   C +F+Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   264 MIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVS 323

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   324 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 355


>UNIPROTKB|Q5SZ64 [details] [associations]
            symbol:SF3B4 "Splicing factor 3B subunit 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL591493
            HOVERGEN:HBG002295 HOGENOM:HOG000200535 EMBL:AL590487
            UniGene:Hs.516160 HGNC:HGNC:10771 IPI:IPI00644485 SMR:Q5SZ64
            MINT:MINT-1440537 STRING:Q5SZ64 Ensembl:ENST00000457312
            Uniprot:Q5SZ64
        Length = 190

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:    59 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 118

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   119 MNGQYLCNRPITVSYAFKKDSKGE 142


>UNIPROTKB|Q7ZWM3 [details] [associations]
            symbol:tnrc4-b "CUGBP Elav-like family member 3-B"
            species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
            mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646
            KO:K13207 GO:GO:0048026 EMBL:BC046942 RefSeq:NP_001080695.1
            UniGene:Xl.12160 ProteinModelPortal:Q7ZWM3 SMR:Q7ZWM3 GeneID:380387
            KEGG:xla:380387 CTD:380387 Xenbase:XB-GENE-5796640 Uniprot:Q7ZWM3
        Length = 462

 Score = 163 (62.4 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 37/81 (45%), Positives = 49/81 (60%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G  IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A  AI
Sbjct:   376 GCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAI 435

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             QS+NG+ +G + L+V  K  K
Sbjct:   436 QSMNGFQIGMKRLKVQLKRPK 456


>FB|FBgn0264001 [details] [associations]
            symbol:bru-3 "bruno-3" species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0017148 "negative regulation of translation" evidence=ISA]
            [GO:0043234 "protein complex" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0043234 GO:GO:0042803 EMBL:AE014296 GO:GO:0017148
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 HSSP:P19339
            KO:K13207 GeneTree:ENSGT00560000076837 FlyBase:FBgn0264001
            UniGene:Dm.13624 GeneID:39527 KEGG:dme:Dmel_CG12478 CTD:39527
            GenomeRNAi:39527 NextBio:814113 EMBL:AY060398 RefSeq:NP_729923.1
            SMR:Q9VU91 IntAct:Q9VU91 MINT:MINT-899406 STRING:Q9VU91
            EnsemblMetazoa:FBtr0330343 UCSC:CG12478-RA InParanoid:Q9VU91
            OMA:HALNGEY Uniprot:Q9VU91
        Length = 422

 Score = 162 (62.1 bits), Expect = 3.0e-11, P = 3.0e-11
 Identities = 37/92 (40%), Positives = 55/92 (59%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             + P  +++G   C +F+Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   325 MFPGCSISGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVS 384

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   385 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 416


>ZFIN|ZDB-GENE-110408-50 [details] [associations]
            symbol:celf3b "cugbp, Elav-like family member 3b"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-110408-50 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00560000076837
            EMBL:BX005277 EMBL:CABZ01052818 EMBL:CABZ01052819 EMBL:CABZ01052820
            EMBL:CABZ01052821 EMBL:CABZ01052822 IPI:IPI00506596
            Ensembl:ENSDART00000024206 Uniprot:E7F293
        Length = 442

 Score = 162 (62.1 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 39/89 (43%), Positives = 53/89 (59%)

Query:    26 ANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 84
             ANT  G   C +F+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N
Sbjct:   350 ANT--GPEGCNVFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDN 407

Query:    85 YDEAVVAIQSLNGYALGNRILQVSFKTNK 113
                A  AIQ++NG+ +G + L+V  K  K
Sbjct:   408 PASAQTAIQAMNGFQIGMKRLKVQLKRPK 436


>UNIPROTKB|Q5SZQ7 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CH471121
            HOVERGEN:HBG107646 KO:K13207 HOGENOM:HOG000004754 CTD:11189
            EMBL:AL589765 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO GeneID:11189
            KEGG:hsa:11189 HGNC:HGNC:11967 PharmGKB:PA36654 GenomeRNAi:11189
            NextBio:42591 IPI:IPI00386736 RefSeq:NP_001166120.1 SMR:Q5SZQ7
            STRING:Q5SZQ7 Ensembl:ENST00000290585 UCSC:uc009wmy.3
            EvolutionaryTrace:Q5SZQ7 Uniprot:Q5SZQ7
        Length = 415

 Score = 161 (61.7 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   326 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 385

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   386 AAIQAMNGFQIGMKRLKVQLKRPK 409


>UNIPROTKB|E1BIM7 [details] [associations]
            symbol:LOC100851458 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0006376 "mRNA splice site selection" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0006376
            GeneTree:ENSGT00560000076837 OMA:TMRNEEL EMBL:DAAA02035244
            IPI:IPI00924044 ProteinModelPortal:E1BIM7
            Ensembl:ENSBTAT00000011768 ArrayExpress:E1BIM7 Uniprot:E1BIM7
        Length = 397

 Score = 160 (61.4 bits), Expect = 4.4e-11, P = 4.4e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   278 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 337

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   338 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 391


>UNIPROTKB|B4DIB6 [details] [associations]
            symbol:CELF2 "cDNA FLJ51739, highly similar to Homo sapiens
            CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript
            variant 2, mRNA" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006376
            "mRNA splice site selection" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AC026887 HOVERGEN:HBG107646 HOGENOM:HOG000004754
            OrthoDB:EOG4N8R4X GO:GO:0006376 EMBL:AL157704 EMBL:AL136320
            UniGene:Hs.309288 HGNC:HGNC:2550 ChiTaRS:CELF2 EMBL:AL136369
            EMBL:AL138769 EMBL:AL162408 EMBL:AK295511 IPI:IPI01011300
            SMR:B4DIB6 STRING:B4DIB6 Ensembl:ENST00000537122 UCSC:uc010qbo.1
            Uniprot:B4DIB6
        Length = 403

 Score = 160 (61.4 bits), Expect = 4.6e-11, P = 4.6e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   284 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 343

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   344 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 397


>UNIPROTKB|Q08E07 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9913
            "Bos taurus" [GO:0048026 "positive regulation of mRNA splicing, via
            spliceosome" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0003723 GO:GO:0030317 HOVERGEN:HBG107646 KO:K13207
            GO:GO:0048026 eggNOG:NOG251494 HOGENOM:HOG000004754
            GeneTree:ENSGT00560000076837 EMBL:BC123480 IPI:IPI00690976
            RefSeq:NP_001070313.1 UniGene:Bt.18201 ProteinModelPortal:Q08E07
            SMR:Q08E07 PRIDE:Q08E07 Ensembl:ENSBTAT00000033848 GeneID:513347
            KEGG:bta:513347 CTD:11189 InParanoid:Q08E07 OMA:HSAYLNP
            NextBio:20870823 ArrayExpress:Q08E07 GO:GO:0000381 Uniprot:Q08E07
        Length = 461

 Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   372 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 431

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   432 AAIQAMNGFQIGMKRLKVQLKRPK 455


>WB|WBGene00015943 [details] [associations]
            symbol:tiar-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0002009
            "morphogenesis of an epithelium" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0010171 "body morphogenesis"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0009792
            GO:GO:0002009 GO:GO:0040007 GO:GO:0002119 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011 GO:GO:0000003
            GO:GO:0003676 EMBL:FO080599 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            GeneID:173967 KEGG:cel:CELE_C18A3.5 UCSC:C18A3.5f.1 CTD:173967
            NextBio:881893 RefSeq:NP_495121.1 ProteinModelPortal:Q95QV8
            SMR:Q95QV8 IntAct:Q95QV8 STRING:Q95QV8 PRIDE:Q95QV8
            EnsemblMetazoa:C18A3.5a WormBase:C18A3.5a InParanoid:Q95QV8
            OMA:WAVEPGQ ArrayExpress:Q95QV8 Uniprot:Q95QV8
        Length = 408

 Score = 160 (61.4 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 33/78 (42%), Positives = 47/78 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+ E +   L + F PFG V   KVIRD  T K KG+GFV+    +EA  AI+ +
Sbjct:   137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  LG R ++ ++ T K
Sbjct:   197 NGQWLGRRTIRTNWATRK 214

 Score = 104 (41.7 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 29/92 (31%), Positives = 48/92 (52%)

Query:    27 NTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYD 86
             N  +G    ++V N+A  TE+ +  Q F  FG +  V++       K +G+ FV   N D
Sbjct:   234 NQTSGDNTSVYVGNIASLTEDEIR-QGFASFGRITEVRIF------KMQGYAFVKFDNKD 286

Query:    87 EAVVAIQSLNGYALGNRILQVSF-KT-NKGKT 116
              A  AI  +N   +G ++++ S+ KT + GKT
Sbjct:   287 AAAKAIVQMNNQDVGGQLVRCSWGKTGDTGKT 318


>UNIPROTKB|Q5SZQ8 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030317 "sperm
            motility" evidence=IEA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0003723 "RNA binding"
            evidence=IMP] [GO:0008380 "RNA splicing" evidence=IMP] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0048026
            "positive regulation of mRNA splicing, via spliceosome"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0007283
            GO:GO:0030317 GO:GO:0000398 HOVERGEN:HBG107646 KO:K13207
            GO:GO:0048026 eggNOG:NOG251494 CTD:11189 GO:GO:0000381
            OrthoDB:EOG4RJG30 EMBL:AF329264 EMBL:AY165003 EMBL:AL589765
            EMBL:BC052491 EMBL:BC068008 EMBL:BC104758 EMBL:BC143226 EMBL:U80746
            EMBL:AF284423 IPI:IPI00852836 IPI:IPI00852895 IPI:IPI00852999
            RefSeq:NP_009116.3 UniGene:Hs.26047 PDB:2DNO PDBsum:2DNO
            ProteinModelPortal:Q5SZQ8 SMR:Q5SZQ8 IntAct:Q5SZQ8
            MINT:MINT-4866187 STRING:Q5SZQ8 PhosphoSite:Q5SZQ8 DMDM:74756184
            PRIDE:Q5SZQ8 Ensembl:ENST00000290583 GeneID:11189 KEGG:hsa:11189
            UCSC:uc001eyr.3 UCSC:uc001eys.2 UCSC:uc009wmx.2
            GeneCards:GC01M151674 HGNC:HGNC:11967 HPA:HPA006292 MIM:612678
            neXtProt:NX_Q5SZQ8 PharmGKB:PA36654 PhylomeDB:Q5SZQ8
            EvolutionaryTrace:Q5SZQ8 GenomeRNAi:11189 NextBio:42591
            ArrayExpress:Q5SZQ8 Bgee:Q5SZQ8 CleanEx:HS_TNRC4
            Genevestigator:Q5SZQ8 Uniprot:Q5SZQ8
        Length = 465

 Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   436 AAIQAMNGFQIGMKRLKVQLKRPK 459


>UNIPROTKB|F1ST15 [details] [associations]
            symbol:CELF3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048026 "positive regulation of mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0030317 "sperm motility"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0007283
            "spermatogenesis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0007283 GO:GO:0003723 GO:GO:0030317 GO:GO:0048026
            GeneTree:ENSGT00560000076837 OMA:HSAYLNP GO:GO:0000381
            EMBL:CU457723 Ensembl:ENSSSCT00000007252 Uniprot:F1ST15
        Length = 465

 Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   436 AAIQAMNGFQIGMKRLKVQLKRPK 459


>MGI|MGI:1926034 [details] [associations]
            symbol:Celf3 "CUGBP, Elav-like family member 3"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008380 "RNA
            splicing" evidence=ISO] [GO:0030317 "sperm motility" evidence=IMP]
            [GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
            evidence=ISO] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 MGI:MGI:1926034 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
            HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
            eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
            CTD:11189 OMA:HSAYLNP GO:GO:0000381 OrthoDB:EOG4RJG30 EMBL:AY165052
            EMBL:BC057553 IPI:IPI00461847 IPI:IPI00854025 RefSeq:NP_766022.1
            UniGene:Mm.44292 ProteinModelPortal:Q8CIN6 SMR:Q8CIN6 STRING:Q8CIN6
            PhosphoSite:Q8CIN6 PaxDb:Q8CIN6 PRIDE:Q8CIN6
            Ensembl:ENSMUST00000029784 GeneID:78784 KEGG:mmu:78784
            UCSC:uc008qgl.1 UCSC:uc008qgm.1 InParanoid:Q8CIN6 NextBio:349492
            Bgee:Q8CIN6 CleanEx:MM_TNRC4 Genevestigator:Q8CIN6 Uniprot:Q8CIN6
        Length = 465

 Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   376 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 435

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   436 AAIQAMNGFQIGMKRLKVQLKRPK 459


>UNIPROTKB|H0Y623 [details] [associations]
            symbol:CELF3 "CUGBP Elav-like family member 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 OMA:HSAYLNP
            EMBL:AL589765 HGNC:HGNC:11967 ProteinModelPortal:H0Y623
            PRIDE:H0Y623 Ensembl:ENST00000420342 Bgee:H0Y623 Uniprot:H0Y623
        Length = 466

 Score = 161 (61.7 bits), Expect = 4.8e-11, P = 4.8e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   377 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 436

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   437 AAIQAMNGFQIGMKRLKVQLKRPK 460


>UNIPROTKB|F1ND14 [details] [associations]
            symbol:CELF1 "CUGBP Elav-like family member 1" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0040018 "positive regulation of multicellular organism growth"
            evidence=IEA] [GO:0042835 "BRE binding" evidence=IEA] [GO:0043484
            "regulation of RNA splicing" evidence=IEA] [GO:0003729 "mRNA
            binding" evidence=IEA] [GO:0006376 "mRNA splice site selection"
            evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
            [GO:0031369 "translation initiation factor binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0040018 GO:GO:0043484 IPI:IPI00854332 GO:GO:0042835
            GO:GO:0006376 GeneTree:ENSGT00560000076837 OMA:PTLYNQS
            EMBL:AADN02033464 Ensembl:ENSGALT00000013143
            Ensembl:ENSGALT00000038511 Uniprot:F1ND14
        Length = 485

 Score = 161 (61.7 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   402 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 461

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   462 NGFQIGMKRLKVQLKRSK 479


>UNIPROTKB|A7MB95 [details] [associations]
            symbol:CUGBP1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
            [GO:0042835 "BRE binding" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0031369 "translation initiation factor binding" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IEA] [GO:0006376 "mRNA
            splice site selection" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0007286 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0040018 GO:GO:0043484 HOVERGEN:HBG107646
            KO:K13207 CTD:10658 eggNOG:NOG251494 HOGENOM:HOG000004754
            OrthoDB:EOG4N8R4X GO:GO:0042835 GO:GO:0006376
            GeneTree:ENSGT00560000076837 OMA:PTLYNQS EMBL:DAAA02041602
            EMBL:DAAA02041603 EMBL:DAAA02041604 EMBL:BC151433 IPI:IPI00824850
            RefSeq:NP_001094682.1 UniGene:Bt.16531 SMR:A7MB95 STRING:A7MB95
            Ensembl:ENSBTAT00000003274 GeneID:540475 KEGG:bta:540475
            InParanoid:A7MB95 NextBio:20878658 Uniprot:A7MB95
        Length = 486

 Score = 161 (61.7 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 462

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   463 NGFQIGMKRLKVQLKRSK 480


>UNIPROTKB|Q92879 [details] [associations]
            symbol:CELF1 "CUGBP Elav-like family member 1" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IEA] [GO:0031369
            "translation initiation factor binding" evidence=IEA] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006376
            "mRNA splice site selection" evidence=ISS] [GO:0005634 "nucleus"
            evidence=NAS] [GO:0042835 "BRE binding" evidence=IDA] [GO:0016246
            "RNA interference" evidence=NAS] [GO:0007281 "germ cell
            development" evidence=NAS] [GO:0009790 "embryo development"
            evidence=NAS] [GO:0030529 "ribonucleoprotein complex" evidence=NAS]
            [GO:0000900 "translation repressor activity, nucleic acid binding"
            evidence=NAS] [GO:0003723 "RNA binding" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0043484 "regulation of RNA
            splicing" evidence=IDA] [GO:0006397 "mRNA processing" evidence=TAS]
            [GO:0003729 "mRNA binding" evidence=IDA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 EMBL:CH471064 GO:GO:0016246
            GO:GO:0007286 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0040018 GO:GO:0003676 GO:GO:0009790 GO:GO:0030529
            GO:GO:0007281 GO:GO:0043484 GO:GO:0000900 HOVERGEN:HBG107646
            KO:K13207 CTD:10658 eggNOG:NOG251494 HOGENOM:HOG000004754
            OrthoDB:EOG4N8R4X EMBL:U63289 EMBL:AF248648 EMBL:AF267533
            EMBL:AF267534 EMBL:AJ007988 EMBL:AK304430 EMBL:AB210019
            EMBL:AC090559 EMBL:BC031079 IPI:IPI00034015 IPI:IPI00218388
            IPI:IPI00218389 IPI:IPI00853009 IPI:IPI00956101
            RefSeq:NP_001020767.1 RefSeq:NP_001166110.1 RefSeq:NP_001166111.1
            RefSeq:NP_006551.1 RefSeq:NP_941989.1 UniGene:Hs.595333 PDB:2CPZ
            PDB:2DHS PDB:2RQ4 PDB:2RQC PDB:3NMR PDB:3NNA PDB:3NNC PDB:3NNH
            PDBsum:2CPZ PDBsum:2DHS PDBsum:2RQ4 PDBsum:2RQC PDBsum:3NMR
            PDBsum:3NNA PDBsum:3NNC PDBsum:3NNH ProteinModelPortal:Q92879
            SMR:Q92879 IntAct:Q92879 MINT:MINT-1382906 STRING:Q92879
            PhosphoSite:Q92879 DMDM:17374605 PaxDb:Q92879 PRIDE:Q92879
            DNASU:10658 Ensembl:ENST00000310513 Ensembl:ENST00000358597
            Ensembl:ENST00000361904 Ensembl:ENST00000395290
            Ensembl:ENST00000395292 Ensembl:ENST00000532048 GeneID:10658
            KEGG:hsa:10658 UCSC:uc001nfk.2 UCSC:uc001nfl.3 UCSC:uc001nfm.3
            UCSC:uc001nfn.3 GeneCards:GC11M047602 HGNC:HGNC:2549 HPA:CAB016114
            MIM:601074 neXtProt:NX_Q92879 PharmGKB:PA27045 InParanoid:Q92879
            PhylomeDB:Q92879 ChiTaRS:CELF1 EvolutionaryTrace:Q92879
            GenomeRNAi:10658 NextBio:40521 ArrayExpress:Q92879 Bgee:Q92879
            CleanEx:HS_CUGBP1 Genevestigator:Q92879 GermOnline:ENSG00000149187
            GO:GO:0042835 GO:GO:0006376 Uniprot:Q92879
        Length = 486

 Score = 161 (61.7 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 462

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   463 NGFQIGMKRLKVQLKRSK 480


>MGI|MGI:1342295 [details] [associations]
            symbol:Celf1 "CUGBP, Elav-like family member 1"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0003729 "mRNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
            "cytoplasm" evidence=IDA;TAS] [GO:0006376 "mRNA splice site
            selection" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0007286 "spermatid development" evidence=IMP]
            [GO:0008380 "RNA splicing" evidence=IEA] [GO:0031369 "translation
            initiation factor binding" evidence=IDA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IMP]
            [GO:0042835 "BRE binding" evidence=ISO] [GO:0043484 "regulation of
            RNA splicing" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1342295
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007286 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0040018 GO:GO:0043484
            EMBL:AL672241 HOVERGEN:HBG107646 KO:K13207 CTD:10658
            eggNOG:NOG251494 ChiTaRS:CELF1 GO:GO:0042835 GO:GO:0006376
            EMBL:AJ007987 EMBL:AF267535 EMBL:AK135030 EMBL:AK143698
            EMBL:AK014492 EMBL:AK156725 EMBL:BC021393 EMBL:AF314172
            EMBL:AB050499 EMBL:X61451 IPI:IPI00123205 IPI:IPI00229237
            IPI:IPI00229238 IPI:IPI00395213 PIR:S16865 RefSeq:NP_001231820.1
            RefSeq:NP_001231832.1 RefSeq:NP_059064.2 RefSeq:NP_941955.1
            UniGene:Mm.29495 UniGene:Mm.490161 ProteinModelPortal:P28659
            SMR:P28659 STRING:P28659 PhosphoSite:P28659 PaxDb:P28659
            PRIDE:P28659 Ensembl:ENSMUST00000005643 Ensembl:ENSMUST00000068726
            Ensembl:ENSMUST00000068747 Ensembl:ENSMUST00000111448
            Ensembl:ENSMUST00000111449 Ensembl:ENSMUST00000111451
            Ensembl:ENSMUST00000111452 Ensembl:ENSMUST00000111455
            Ensembl:ENSMUST00000177642 GeneID:13046 KEGG:mmu:13046
            UCSC:uc008ktx.1 GeneTree:ENSGT00560000076837 InParanoid:P28659
            OMA:PTLYNQS NextBio:282946 Bgee:P28659 CleanEx:MM_CUGBP1
            Genevestigator:P28659 GermOnline:ENSMUSG00000005506 GO:GO:0031369
            Uniprot:P28659
        Length = 486

 Score = 161 (61.7 bits), Expect = 5.1e-11, P = 5.1e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   403 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 462

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   463 NGFQIGMKRLKVQLKRSK 480


>RGD|1307721 [details] [associations]
            symbol:Celf1 "CUGBP, Elav-like family member 1" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=ISO;ISS] [GO:0003729 "mRNA binding"
            evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006376 "mRNA splice
            site selection" evidence=IEA;ISO] [GO:0007286 "spermatid
            development" evidence=IEA;ISO] [GO:0031369 "translation initiation
            factor binding" evidence=IEA;ISO] [GO:0040018 "positive regulation
            of multicellular organism growth" evidence=IEA;ISO] [GO:0042835
            "BRE binding" evidence=IEA;ISO] [GO:0043484 "regulation of RNA
            splicing" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1307721
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007286 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0040018 GO:GO:0003723
            GO:GO:0043484 HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 CTD:10658
            eggNOG:NOG251494 HOGENOM:HOG000004754 OrthoDB:EOG4N8R4X
            GO:GO:0042835 GO:GO:0006376 EMBL:BC098012 IPI:IPI00373642
            RefSeq:NP_001020592.1 UniGene:Rn.22432 ProteinModelPortal:Q4QQT3
            SMR:Q4QQT3 STRING:Q4QQT3 PhosphoSite:Q4QQT3 PRIDE:Q4QQT3
            GeneID:362160 KEGG:rno:362160 UCSC:RGD:1307721 InParanoid:Q4QQT3
            NextBio:678844 Genevestigator:Q4QQT3 Uniprot:Q4QQT3
        Length = 487

 Score = 161 (61.7 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   404 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 463

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   464 NGFQIGMKRLKVQLKRSK 481


>UNIPROTKB|Q4QQT3 [details] [associations]
            symbol:Celf1 "CUGBP Elav-like family member 1"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 RGD:1307721 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007286 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0040018 GO:GO:0003723 GO:GO:0043484
            HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 CTD:10658 eggNOG:NOG251494
            HOGENOM:HOG000004754 OrthoDB:EOG4N8R4X GO:GO:0042835 GO:GO:0006376
            EMBL:BC098012 IPI:IPI00373642 RefSeq:NP_001020592.1
            UniGene:Rn.22432 ProteinModelPortal:Q4QQT3 SMR:Q4QQT3 STRING:Q4QQT3
            PhosphoSite:Q4QQT3 PRIDE:Q4QQT3 GeneID:362160 KEGG:rno:362160
            UCSC:RGD:1307721 InParanoid:Q4QQT3 NextBio:678844
            Genevestigator:Q4QQT3 Uniprot:Q4QQT3
        Length = 487

 Score = 161 (61.7 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   404 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 463

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   464 NGFQIGMKRLKVQLKRSK 481


>UNIPROTKB|Q5F3T7 [details] [associations]
            symbol:CELF1 "CUGBP Elav-like family member 1" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0005737
            GO:GO:0008380 GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330
            GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207
            EMBL:AJ851563 EMBL:AB050497 IPI:IPI00581213 IPI:IPI00854332
            RefSeq:NP_001012539.1 UniGene:Gga.14943 UniGene:Gga.56092
            ProteinModelPortal:Q5F3T7 SMR:Q5F3T7 STRING:Q5F3T7 PRIDE:Q5F3T7
            GeneID:373923 KEGG:gga:373923 CTD:10658 eggNOG:NOG251494
            HOGENOM:HOG000004754 InParanoid:Q5F3T7 OrthoDB:EOG4N8R4X
            NextBio:20813455 Uniprot:Q5F3T7
        Length = 489

 Score = 161 (61.7 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   406 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 465

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   466 NGFQIGMKRLKVQLKRSK 483


>UNIPROTKB|E2R8F6 [details] [associations]
            symbol:CELF1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043484 "regulation of RNA splicing"
            evidence=IEA] [GO:0042835 "BRE binding" evidence=IEA] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IEA] [GO:0031369 "translation initiation factor binding"
            evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
            [GO:0006376 "mRNA splice site selection" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0007286 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0040018 GO:GO:0043484
            GO:GO:0042835 GO:GO:0006376 GeneTree:ENSGT00560000076837
            OMA:PTLYNQS EMBL:AAEX03011483 ProteinModelPortal:E2R8F6
            Ensembl:ENSCAFT00000013438 Uniprot:E2R8F6
        Length = 513

 Score = 161 (61.7 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   430 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 489

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   490 NGFQIGMKRLKVQLKRSK 507


>UNIPROTKB|Q5R995 [details] [associations]
            symbol:CELF1 "CUGBP Elav-like family member 1" species:9601
            "Pongo abelii" [GO:0003723 "RNA binding" evidence=ISS] [GO:0043484
            "regulation of RNA splicing" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0043484
            HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 CTD:10658 EMBL:CR859496
            RefSeq:NP_001125976.1 UniGene:Pab.4290 ProteinModelPortal:Q5R995
            SMR:Q5R995 PRIDE:Q5R995 GeneID:100172914 KEGG:pon:100172914
            InParanoid:Q5R995 Uniprot:Q5R995
        Length = 513

 Score = 161 (61.7 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   430 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 489

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   490 NGFQIGMKRLKVQLKRSK 507


>UNIPROTKB|G5EA30 [details] [associations]
            symbol:CELF1 "CUG triplet repeat, RNA binding protein 1,
            isoform CRA_c" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CH471064 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC090559 UniGene:Hs.595333
            HGNC:HGNC:2549 ChiTaRS:CELF1 OMA:PTLYNQS ProteinModelPortal:G5EA30
            SMR:G5EA30 PRIDE:G5EA30 Ensembl:ENST00000531165 ArrayExpress:G5EA30
            Bgee:G5EA30 Uniprot:G5EA30
        Length = 514

 Score = 161 (61.7 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 36/78 (46%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   A  AIQS+
Sbjct:   431 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSM 490

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   491 NGFQIGMKRLKVQLKRSK 508


>UNIPROTKB|Q91579 [details] [associations]
            symbol:tnrc4-a "CUGBP Elav-like family member 3-A"
            species:8355 "Xenopus laevis" [GO:0048026 "positive regulation of
            mRNA splicing, via spliceosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:U16800 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:BC057704 EMBL:BC072134
            RefSeq:NP_001079936.1 UniGene:Xl.986 HSSP:Q92879
            ProteinModelPortal:Q91579 SMR:Q91579 GeneID:379627 KEGG:xla:379627
            CTD:379627 Xenbase:XB-GENE-6255196 HOVERGEN:HBG107646 KO:K13207
            GO:GO:0048026 Uniprot:Q91579
        Length = 462

 Score = 160 (61.4 bits), Expect = 6.0e-11, P = 6.0e-11
 Identities = 36/81 (44%), Positives = 49/81 (60%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G  IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A  AI
Sbjct:   376 GCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAI 435

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             Q++NG+ +G + L+V  K  K
Sbjct:   436 QAMNGFQIGMKRLKVQLKRPK 456


>UNIPROTKB|E2RGA8 [details] [associations]
            symbol:CELF3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 OMA:HSAYLNP EMBL:AAEX03011056
            Ensembl:ENSCAFT00000020318 Uniprot:E2RGA8
        Length = 539

 Score = 161 (61.7 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 37/84 (44%), Positives = 50/84 (59%)

Query:    31 GSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G   C IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A 
Sbjct:   450 GPDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQ 509

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              AIQ++NG+ +G + L+V  K  K
Sbjct:   510 AAIQAMNGFQIGMKRLKVQLKRPK 533


>FB|FBgn0005649 [details] [associations]
            symbol:Rox8 "Rox8" species:7227 "Drosophila melanogaster"
            [GO:0008143 "poly(A) RNA binding" evidence=NAS] [GO:0003729 "mRNA
            binding" evidence=ISS;NAS] [GO:0005685 "U1 snRNP" evidence=ISS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014297
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000398
            GO:GO:0000381 HSSP:P11940 GO:GO:0005685
            GeneTree:ENSGT00680000099967 KO:K13201 OMA:EEVYNQS
            FlyBase:FBgn0005649 EMBL:BT050464 RefSeq:NP_732945.1
            UniGene:Dm.6352 SMR:Q8IMX4 IntAct:Q8IMX4 MINT:MINT-303158
            STRING:Q8IMX4 EnsemblMetazoa:FBtr0084591 EnsemblMetazoa:FBtr0333200
            EnsemblMetazoa:FBtr0333201 EnsemblMetazoa:FBtr0333202 GeneID:42848
            KEGG:dme:Dmel_CG5422 UCSC:CG5422-RD CTD:42848 InParanoid:Q8IMX4
            GenomeRNAi:42848 NextBio:830893 Uniprot:Q8IMX4
        Length = 470

 Score = 160 (61.4 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 31/78 (39%), Positives = 49/78 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+PE E   L + F PFG + + +++RD  T K KG+ FV+     EA  AIQ++
Sbjct:    97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAM 156

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  +G+R ++ ++ T K
Sbjct:   157 NGQWIGSRSIRTNWSTRK 174


>UNIPROTKB|F1NZY6 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 GeneTree:ENSGT00560000076837 EMBL:AADN02039408
            EMBL:AADN02039409 EMBL:AADN02039410 EMBL:AADN02039411
            EMBL:AADN02039412 EMBL:AADN02039413 EMBL:AADN02039414
            EMBL:AADN02039415 EMBL:AADN02039416 EMBL:AADN02039417
            EMBL:AADN02039418 EMBL:AADN02039419 EMBL:AADN02039420
            EMBL:AADN02039421 EMBL:AADN02039422 EMBL:AADN02039423
            EMBL:AADN02039424 EMBL:AADN02039425 EMBL:AADN02039426
            EMBL:AADN02039427 EMBL:AADN02039428 EMBL:AADN02039429
            EMBL:AADN02039430 EMBL:AADN02039431 EMBL:AADN02039432
            EMBL:AADN02039433 IPI:IPI00971429 Ensembl:ENSGALT00000010859
            ArrayExpress:F1NZY6 Uniprot:F1NZY6
        Length = 484

 Score = 160 (61.4 bits), Expect = 6.6e-11, P = 6.6e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   365 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 424

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   425 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 478


>UNIPROTKB|Q7T2T1 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646
            KO:K13207 eggNOG:NOG251494 HOGENOM:HOG000004754 EMBL:AY288985
            EMBL:AY288986 IPI:IPI00574339 IPI:IPI00587312 RefSeq:NP_989591.1
            UniGene:Gga.4919 ProteinModelPortal:Q7T2T1 SMR:Q7T2T1 STRING:Q7T2T1
            PRIDE:Q7T2T1 GeneID:374111 KEGG:gga:374111 CTD:10659
            InParanoid:Q7T2T1 NextBio:20813628 Uniprot:Q7T2T1
        Length = 484

 Score = 160 (61.4 bits), Expect = 6.6e-11, P = 6.6e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   365 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 424

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   425 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 478


>UNIPROTKB|E1C045 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006376 "mRNA splice site selection"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006376
            GeneTree:ENSGT00560000076837 IPI:IPI00587312 EMBL:AADN02039408
            EMBL:AADN02039409 EMBL:AADN02039410 EMBL:AADN02039411
            EMBL:AADN02039412 EMBL:AADN02039413 EMBL:AADN02039414
            EMBL:AADN02039415 EMBL:AADN02039416 EMBL:AADN02039417
            EMBL:AADN02039418 EMBL:AADN02039419 EMBL:AADN02039420
            EMBL:AADN02039421 EMBL:AADN02039422 EMBL:AADN02039423
            EMBL:AADN02039424 EMBL:AADN02039425 EMBL:AADN02039426
            EMBL:AADN02039427 EMBL:AADN02039428 EMBL:AADN02039429
            EMBL:AADN02039430 EMBL:AADN02039431 EMBL:AADN02039432
            EMBL:AADN02039433 ProteinModelPortal:E1C045
            Ensembl:ENSGALT00000010858 ArrayExpress:E1C045 Uniprot:E1C045
        Length = 488

 Score = 160 (61.4 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   369 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 428

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   429 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 482


>UNIPROTKB|F1P674 [details] [associations]
            symbol:CELF2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 KO:K13207 GeneTree:ENSGT00560000076837 CTD:10659
            OMA:TMRNEEL EMBL:AAEX03001288 EMBL:AAEX03001289 EMBL:AAEX03001290
            RefSeq:XP_003433765.1 ProteinModelPortal:F1P674
            Ensembl:ENSCAFT00000008021 GeneID:607310 KEGG:cfa:607310
            Uniprot:F1P674
        Length = 488

 Score = 160 (61.4 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   369 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 428

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   429 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 482


>UNIPROTKB|F1P017 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006376 "mRNA splice site selection"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006376
            GeneTree:ENSGT00560000076837 OMA:TMRNEEL EMBL:AADN02039408
            EMBL:AADN02039409 EMBL:AADN02039410 EMBL:AADN02039411
            EMBL:AADN02039412 EMBL:AADN02039413 EMBL:AADN02039414
            EMBL:AADN02039415 EMBL:AADN02039416 EMBL:AADN02039417
            EMBL:AADN02039418 EMBL:AADN02039419 EMBL:AADN02039420
            EMBL:AADN02039421 EMBL:AADN02039422 EMBL:AADN02039423
            EMBL:AADN02039424 EMBL:AADN02039425 EMBL:AADN02039426
            EMBL:AADN02039427 EMBL:AADN02039428 EMBL:AADN02039429
            EMBL:AADN02039430 EMBL:AADN02039431 EMBL:AADN02039432
            EMBL:AADN02039433 IPI:IPI00820413 Ensembl:ENSGALT00000040039
            ArrayExpress:F1P017 Uniprot:F1P017
        Length = 494

 Score = 160 (61.4 bits), Expect = 6.8e-11, P = 6.8e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   375 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 434

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   435 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 488


>RGD|1563168 [details] [associations]
            symbol:Celf3 "CUGBP, Elav-like family member 3" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0005575
            "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0007283
            "spermatogenesis" evidence=ISO] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0030317
            "sperm motility" evidence=ISO] [GO:0048026 "positive regulation of
            mRNA splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1563168 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0007283 GO:GO:0003723 GO:GO:0030317
            GO:GO:0048026 GeneTree:ENSGT00560000076837 GO:GO:0000381
            OrthoDB:EOG4RJG30 EMBL:AC133978 IPI:IPI00204869
            ProteinModelPortal:D4A916 Ensembl:ENSRNOT00000028324
            UCSC:RGD:1563168 Uniprot:D4A916
        Length = 494

 Score = 160 (61.4 bits), Expect = 6.8e-11, P = 6.8e-11
 Identities = 36/81 (44%), Positives = 49/81 (60%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G  IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A  AI
Sbjct:   408 GCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 467

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             Q++NG+ +G + L+V  K  K
Sbjct:   468 QAMNGFQIGMKRLKVQLKRPK 488


>UNIPROTKB|Q5VZZ6 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 EMBL:AC026887 HOVERGEN:HBG107646 HOGENOM:HOG000004754
            EMBL:AL157704 EMBL:AL136320 IPI:IPI00845480 UniGene:Hs.309288
            HGNC:HGNC:2550 EMBL:AL136369 EMBL:AL138769 EMBL:AL162408 SMR:Q5VZZ6
            Ensembl:ENST00000354897 Uniprot:Q5VZZ6
        Length = 498

 Score = 160 (61.4 bits), Expect = 6.9e-11, P = 6.9e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   379 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 438

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   439 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 492


>ZFIN|ZDB-GENE-030826-35 [details] [associations]
            symbol:celf2 "cugbp, Elav-like family member 2"
            species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030826-35 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00560000076837
            EMBL:AL935165 EMBL:BX511190 EMBL:CABZ01029785 EMBL:CABZ01029786
            EMBL:CABZ01029787 IPI:IPI00994559 Ensembl:ENSDART00000129320
            ArrayExpress:E7F7K3 Bgee:E7F7K3 Uniprot:E7F7K3
        Length = 585

 Score = 161 (61.7 bits), Expect = 7.0e-11, P = 7.0e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   466 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 525

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   526 VVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 579


>UNIPROTKB|O95319 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006396 "RNA processing"
            evidence=TAS] [GO:0008016 "regulation of heart contraction"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0008016 GO:GO:0003723
            GO:GO:0006396 EMBL:CH471072 EMBL:AC026887 HSSP:Q92879
            HOVERGEN:HBG107646 KO:K13207 eggNOG:NOG251494 CTD:10659
            EMBL:AF090694 EMBL:AF090693 EMBL:AF036956 EMBL:U69546 EMBL:AF295068
            EMBL:AF295063 EMBL:AF295064 EMBL:AF295065 EMBL:AF295066
            EMBL:AF295067 EMBL:AF314199 EMBL:AF432906 EMBL:AK316354
            EMBL:AL157704 EMBL:AL136320 EMBL:BC036391 IPI:IPI00410277
            IPI:IPI00607544 IPI:IPI00845479 IPI:IPI00845480 IPI:IPI00853320
            RefSeq:NP_001020247.1 RefSeq:NP_001020248.1 RefSeq:NP_001077060.1
            RefSeq:NP_006552.3 UniGene:Hs.309288 ProteinModelPortal:O95319
            SMR:O95319 IntAct:O95319 MINT:MINT-2868664 STRING:O95319
            PhosphoSite:O95319 UCD-2DPAGE:O95319 PaxDb:O95319 PRIDE:O95319
            Ensembl:ENST00000315874 Ensembl:ENST00000354440
            Ensembl:ENST00000379261 Ensembl:ENST00000399850
            Ensembl:ENST00000416382 Ensembl:ENST00000417956
            Ensembl:ENST00000427450 GeneID:10659 KEGG:hsa:10659 UCSC:uc001iki.4
            UCSC:uc001ikk.2 UCSC:uc001iko.4 UCSC:uc001ikp.4 UCSC:uc010qbj.1
            GeneCards:GC10P011049 HGNC:HGNC:2550 MIM:602538 neXtProt:NX_O95319
            PharmGKB:PA27046 ChiTaRS:CELF2 GenomeRNAi:10659 NextBio:40529
            ArrayExpress:O95319 Bgee:O95319 CleanEx:HS_CUGBP2
            Genevestigator:O95319 Uniprot:O95319
        Length = 508

 Score = 160 (61.4 bits), Expect = 7.1e-11, P = 7.1e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   389 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 448

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   449 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 502


>MGI|MGI:1338822 [details] [associations]
            symbol:Celf2 "CUGBP, Elav-like family member 2"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006376
            "mRNA splice site selection" evidence=IDA] [GO:0006397 "mRNA
            processing" evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1338822 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 HSSP:Q92879
            HOVERGEN:HBG107646 KO:K13207 eggNOG:NOG251494 GO:GO:0006376
            GeneTree:ENSGT00560000076837 CTD:10659 ChiTaRS:CELF2 EMBL:AF090696
            EMBL:AF090697 EMBL:Y18298 EMBL:AK137292 EMBL:AK151818 EMBL:AK152628
            EMBL:AK153267 EMBL:AK160861 EMBL:AK161349 EMBL:AK164914
            EMBL:AL929240 EMBL:AL845492 EMBL:AL845515 EMBL:BC026856
            IPI:IPI00129146 IPI:IPI00651950 IPI:IPI00750780 IPI:IPI00751703
            IPI:IPI00756899 IPI:IPI00853748 IPI:IPI00853844 IPI:IPI00853921
            IPI:IPI00854018 IPI:IPI00854021 RefSeq:NP_001103698.1
            RefSeq:NP_001103699.1 RefSeq:NP_001103700.1 RefSeq:NP_001103701.1
            RefSeq:NP_001103702.1 RefSeq:NP_001153764.1 RefSeq:NP_001153765.1
            RefSeq:NP_034290.2 UniGene:Mm.398543 ProteinModelPortal:Q9Z0H4
            SMR:Q9Z0H4 STRING:Q9Z0H4 PhosphoSite:Q9Z0H4 PaxDb:Q9Z0H4
            PRIDE:Q9Z0H4 Ensembl:ENSMUST00000002176 Ensembl:ENSMUST00000100429
            Ensembl:ENSMUST00000114924 Ensembl:ENSMUST00000114927
            Ensembl:ENSMUST00000114934 GeneID:14007 KEGG:mmu:14007
            UCSC:uc008ign.1 UCSC:uc008igo.1 UCSC:uc008igp.1 UCSC:uc008igq.2
            UCSC:uc008igs.2 UCSC:uc008igt.2 UCSC:uc008igv.2 InParanoid:Q9Z0H4
            OMA:TMRNEEL NextBio:284908 Bgee:Q9Z0H4 CleanEx:MM_CUGBP2
            Genevestigator:Q9Z0H4 Uniprot:Q9Z0H4
        Length = 508

 Score = 160 (61.4 bits), Expect = 7.1e-11, P = 7.1e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   389 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 448

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   449 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 502


>RGD|68347 [details] [associations]
            symbol:Celf2 "CUGBP, Elav-like family member 2" species:10116
           "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
           [GO:0003723 "RNA binding" evidence=IDA] [GO:0005634 "nucleus"
           evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
           [GO:0006376 "mRNA splice site selection" evidence=IEA;ISO]
           InterPro:IPR000504 InterPro:IPR002343 InterPro:IPR012677
           Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102 SMART:SM00360 RGD:68347
           GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 Gene3D:3.30.70.330
           GO:GO:0003723 HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207
           eggNOG:NOG251494 HOGENOM:HOG000004754 OrthoDB:EOG4N8R4X
           GO:GO:0006376 GeneTree:ENSGT00560000076837 CTD:10659 OMA:TMRNEEL
           EMBL:AF090695 EMBL:AJ010351 EMBL:AJ010386 EMBL:BC129096
           IPI:IPI00212483 IPI:IPI00781372 IPI:IPI00854036 IPI:IPI00854042
           RefSeq:NP_058893.2 UniGene:Rn.162247 ProteinModelPortal:Q792H5
           SMR:Q792H5 STRING:Q792H5 PhosphoSite:Q792H5 PRIDE:Q792H5
           Ensembl:ENSRNOT00000023436 GeneID:29428 KEGG:rno:29428
           InParanoid:Q792H5 NextBio:609142 ArrayExpress:Q792H5
           Genevestigator:Q792H5 Uniprot:Q792H5
        Length = 508

 Score = 160 (61.4 bits), Expect = 7.1e-11, P = 7.1e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   389 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 448

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   449 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 502


>ZFIN|ZDB-GENE-000501-2 [details] [associations]
            symbol:celf3a "cugbp, Elav-like family member 3a"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-000501-2 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            HSSP:Q92879 HOVERGEN:HBG107646 KO:K13207 GO:GO:0048026
            eggNOG:NOG251494 HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837
            EMBL:AB032725 EMBL:BX248499 EMBL:BC060923 IPI:IPI00504951
            RefSeq:NP_571569.2 UniGene:Dr.8323 ProteinModelPortal:Q9IBD1
            SMR:Q9IBD1 Ensembl:ENSDART00000039629 GeneID:57922 KEGG:dre:57922
            CTD:57922 OMA:MQHYTAT OrthoDB:EOG4RJG30 NextBio:20891938
            Bgee:Q9IBD1 Uniprot:Q9IBD1
        Length = 452

 Score = 159 (61.0 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 36/81 (44%), Positives = 49/81 (60%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G  IF+Y+L  E  +S + Q+F PFG V S KV  D  TN+ K FGFV+  N   A  AI
Sbjct:   366 GCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPASAQAAI 425

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             Q++NG+ +G + L+V  K  K
Sbjct:   426 QAMNGFQIGMKRLKVQLKRPK 446


>UNIPROTKB|E9PC62 [details] [associations]
            symbol:CELF2 "CUGBP Elav-like family member 2" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006376 "mRNA splice site selection"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AC026887 KO:K13207
            GO:GO:0006376 CTD:10659 EMBL:AL157704 EMBL:AL136320 IPI:IPI00845479
            RefSeq:NP_006552.3 UniGene:Hs.309288 GeneID:10659 KEGG:hsa:10659
            HGNC:HGNC:2550 ChiTaRS:CELF2 GenomeRNAi:10659 NextBio:40529
            OMA:TMRNEEL EMBL:AL136369 EMBL:AL138769 EMBL:AL162408 SMR:E9PC62
            Ensembl:ENST00000450189 Ensembl:ENST00000542579 UCSC:uc001ikl.4
            Uniprot:E9PC62
        Length = 521

 Score = 160 (61.4 bits), Expect = 7.5e-11, P = 7.5e-11
 Identities = 42/114 (36%), Positives = 63/114 (55%)

Query:     7 GLQRFSPLT-GDLLASSILPANTMNGS------GWCIFVYNLAPETEESVLWQLFGPFGA 59
             G+Q+++      L + S+L   +  GS      G  +F+Y+L  E  +  + Q+F PFG 
Sbjct:   402 GIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGN 461

Query:    60 VQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V S KV  D QTN  K FGFV+  N   A  AIQ++NG+ +G + L+V  K +K
Sbjct:   462 VISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLKVQLKRSK 515


>ASPGD|ASPL0000061196 [details] [associations]
            symbol:AN10164 species:162425 "Emericella nidulans"
            [GO:0034063 "stress granule assembly" evidence=IEA] [GO:0000184
            "nuclear-transcribed mRNA catabolic process, nonsense-mediated
            decay" evidence=IEA] [GO:0043488 "regulation of mRNA stability"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 EMBL:BN001308 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:C8VTL0 EnsemblFungi:CADANIAT00001543 OMA:QNTNPIP
            Uniprot:C8VTL0
        Length = 477

 Score = 143 (55.4 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
 Identities = 29/82 (35%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+ E  + VL Q F  FG+V   +V+ D++T + +G+GFV      +A  A+ S+
Sbjct:   184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSM 243

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             +G  LG+R ++ ++   KG+ S
Sbjct:   244 DGEWLGSRAIRCNWANQKGQPS 265

 Score = 96 (38.9 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
 Identities = 26/80 (32%), Positives = 41/80 (51%)

Query:    37 FVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             +V NL P T ++ +  LF  FG V   ++  D      +GF F+ M  ++ A  AI  LN
Sbjct:   311 YVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKMDTHENAASAICQLN 364

Query:    97 GYALGNRILQVSFKTNKGKT 116
             GY +  R L+ S+  ++  T
Sbjct:   365 GYNVNGRPLKCSWGKDRPPT 384

 Score = 95 (38.5 bits), Expect = 0.00066, P = 0.00066
 Identities = 26/75 (34%), Positives = 40/75 (53%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTN-KCKGFGFVTMTNYDEAVVAIQS 94
             ++V  L P   E +L Q+F   G V SVK+I D   N K   +GFV   +   A  A+Q+
Sbjct:    92 LYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAMQT 151

Query:    95 LNGYALGNRILQVSF 109
             LNG  +    ++V++
Sbjct:   152 LNGRRIHQSEIRVNW 166

 Score = 37 (18.1 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query:     8 LQRFSPLTGDLLASSILPANTMNGSG 33
             L++    TG +++  I+P    N  G
Sbjct:   106 LKQIFETTGHVISVKIIPDKNFNSKG 131


>TAIR|locus:2077137 [details] [associations]
            symbol:AT3G46020 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL162459 eggNOG:COG0724
            HOGENOM:HOG000276232 HSSP:Q61474 EMBL:BT012586 EMBL:BT015095
            IPI:IPI00521590 RefSeq:NP_190188.1 UniGene:At.35968
            ProteinModelPortal:Q9LZT1 SMR:Q9LZT1 EnsemblPlants:AT3G46020.1
            GeneID:823745 KEGG:ath:AT3G46020 TAIR:At3g46020 InParanoid:Q9LZT1
            OMA:QIKEARL PhylomeDB:Q9LZT1 ProtClustDB:CLSN2915511
            Genevestigator:Q9LZT1 Uniprot:Q9LZT1
        Length = 102

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 30/77 (38%), Positives = 48/77 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+  T +  L QLF PFG ++  ++IRD +T + KGFGF+T  + D+A  A++SL
Sbjct:     9 LFVSRLSAYTTDQSLRQLFSPFGQIKEARLIRDSETQRPKGFGFITFDSEDDARKALKSL 68

Query:    96 NGYALGNRILQVSFKTN 112
             +G  +  R++ V    N
Sbjct:    69 DGKIVDGRLIFVEVAKN 85


>ZFIN|ZDB-GENE-030131-2167 [details] [associations]
            symbol:tia1l "cytotoxic granule-associated RNA
            binding protein 1, like" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-2167 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 HSSP:P11940 GeneTree:ENSGT00680000099967 KO:K13201
            OMA:PAYNTTV HOVERGEN:HBG105006 EMBL:BX088551 EMBL:BC045485
            EMBL:BC066734 IPI:IPI00499030 RefSeq:NP_956476.1 UniGene:Dr.5585
            SMR:Q7ZVM6 Ensembl:ENSDART00000003957 GeneID:323447 KEGG:dre:323447
            CTD:323447 InParanoid:Q7ZVM6 NextBio:20808253 Uniprot:Q7ZVM6
        Length = 342

 Score = 155 (59.6 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 30/78 (38%), Positives = 47/78 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++DL T K KG+GF++  N  +A  AIQ +
Sbjct:    99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQM 158

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  LG R ++ ++ T K
Sbjct:   159 NGQWLGGRQIRTNWATRK 176


>FB|FBgn0000114 [details] [associations]
            symbol:aret "arrest" species:7227 "Drosophila melanogaster"
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0007286 "spermatid
            development" evidence=IMP] [GO:0007319 "negative regulation of
            oskar mRNA translation" evidence=IDA;NAS;TAS] [GO:0003729 "mRNA
            binding" evidence=ISS;NAS;TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0030727 "germarium-derived female germ-line cyst
            formation" evidence=TAS] [GO:0042078 "germ-line stem cell division"
            evidence=NAS] [GO:0046011 "regulation of oskar mRNA translation"
            evidence=TAS] [GO:0006378 "mRNA polyadenylation" evidence=TAS]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IDA;TAS] [GO:0017148
            "negative regulation of translation" evidence=IMP] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0043186 "P granule"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IMP] [GO:0003723 "RNA binding" evidence=IDA] [GO:0007281
            "germ cell development" evidence=IMP] [GO:0031536 "positive
            regulation of exit from mitosis" evidence=IMP] [GO:0002121
            "inter-male aggressive behavior" evidence=IMP] [GO:0007476
            "imaginal disc-derived wing morphogenesis" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 EMBL:AE014134 GO:GO:0007286
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0003730
            GO:GO:0002121 HSSP:P19339 GO:GO:0007476 GO:GO:0030727 GO:GO:0007319
            GO:GO:0031536 GO:GO:0042078 GeneTree:ENSGT00560000076837
            GO:GO:0000381 GO:GO:0043186 FlyBase:FBgn0000114 UniGene:Dm.4487
            GeneID:34648 KEGG:dme:Dmel_CG31762 CTD:34648 KO:K02177
            GenomeRNAi:34648 NextBio:789496 EMBL:BT133212 RefSeq:NP_723737.1
            SMR:Q8IP90 MINT:MINT-1597685 STRING:Q8IP90
            EnsemblMetazoa:FBtr0080344 EnsemblMetazoa:FBtr0331645
            UCSC:CG31762-RB InParanoid:Q8IP90 OMA:ASAYMST Uniprot:Q8IP90
        Length = 810

 Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 41/105 (39%), Positives = 59/105 (56%)

Query:    12 SPLTGDLLASSILPA--NTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRD 68
             SPL    L+++   A    + G   C +F+Y+L  E  ++ L   F PFG V S KV  D
Sbjct:   701 SPLASVALSAAAAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAKVFID 760

Query:    69 LQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
              QT+  K FGFV+  N D A VAI+++NG+ +G + L+V  K  K
Sbjct:   761 KQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPK 805


>WB|WBGene00006807 [details] [associations]
            symbol:unc-75 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016607
            "nuclear speck" evidence=IDA] [GO:0032224 "positive regulation of
            synaptic transmission, cholinergic" evidence=IMP] [GO:0032230
            "positive regulation of synaptic transmission, GABAergic"
            evidence=IMP] [GO:0016071 "mRNA metabolic process" evidence=ISS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0007271 "synaptic
            transmission, cholinergic" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0016071 GO:GO:0000166 GO:GO:0016607 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0032230 GO:GO:0007271 HSSP:P19339
            KO:K13207 GeneTree:ENSGT00560000076837 GO:GO:0032224 EMBL:Z81473
            EMBL:AY342388 PIR:T19347 RefSeq:NP_492958.3 UniGene:Cel.20354
            ProteinModelPortal:G5EE68 SMR:G5EE68 IntAct:G5EE68
            EnsemblMetazoa:C17D12.2 GeneID:182722 KEGG:cel:CELE_C17D12.2
            CTD:182722 WormBase:C17D12.2 OMA:SHAQTEN NextBio:918598
            Uniprot:G5EE68
        Length = 514

 Score = 158 (60.7 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 32/94 (34%), Positives = 53/94 (56%)

Query:    23 ILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTM 82
             + P   +   G  +F+Y+L  E  ++ L Q+F PFG + S KV  D  TN+ K FGFV+ 
Sbjct:   418 VTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSY 477

Query:    83 TNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKT 116
              N   +  AI ++NG+ +G + L+V  K  + ++
Sbjct:   478 DNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNES 511


>RGD|1307630 [details] [associations]
            symbol:Celf4 "CUGBP, Elav-like family member 4" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1307630 GO:GO:0005634 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0000380 GO:GO:0048026 GO:GO:0006376
            GeneTree:ENSGT00560000076837 GO:GO:0000381 IPI:IPI00870309
            Ensembl:ENSRNOT00000061151 ArrayExpress:F1M6I9 Uniprot:F1M6I9
        Length = 355

 Score = 155 (59.6 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             ++P     G   C + +Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   258 MIPQQQREGPEGCNLLIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVS 317

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   318 FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 349


>UNIPROTKB|K7EJD7 [details] [associations]
            symbol:CELF4 "CUGBP Elav-like family member 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 HGNC:HGNC:14015 EMBL:AC015961 EMBL:AC090386
            EMBL:AC093332 EMBL:AC129908 Ensembl:ENST00000589386 Uniprot:K7EJD7
        Length = 185

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             ++P     G   C +F+Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+
Sbjct:   102 MIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVS 161

Query:    82 MTNYDEAVVAIQSLNGYALGNRIL 105
               N   A  AIQ++NG+ +G + L
Sbjct:   162 FDNPASAQTAIQAMNGFQIGMKRL 185


>UNIPROTKB|F1S8E8 [details] [associations]
            symbol:CELF5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 OMA:DGMKDLD EMBL:FP016150
            EMBL:FP565386 Ensembl:ENSSSCT00000014721 Uniprot:F1S8E8
        Length = 420

 Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             +L      G   C +F+Y+L  E  ++ L Q+F PFG + S KV  D  TN+ K FGFV+
Sbjct:   323 LLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 382

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   383 FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 414


>ZFIN|ZDB-GENE-050208-746 [details] [associations]
            symbol:celf5 "cugbp, Elav-like family member 5"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-050208-746 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00560000076837
            EMBL:BX510913 EMBL:AL929135 EMBL:BX664613 IPI:IPI00633183
            Ensembl:ENSDART00000093310 Bgee:F1R633 Uniprot:F1R633
        Length = 597

 Score = 158 (60.7 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 35/81 (43%), Positives = 49/81 (60%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G  +F+Y+L  E  ++ L Q+F PFG V S KV  D  TN+ K FGFV+  N   A  AI
Sbjct:   511 GCNLFIYHLPQEFGDNELMQMFLPFGTVISSKVFMDRATNQSKCFGFVSFDNPASAQAAI 570

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             Q++NG+ +G + L+V  K  K
Sbjct:   571 QAMNGFQIGMKRLKVQLKRPK 591


>ZFIN|ZDB-GENE-020419-22 [details] [associations]
            symbol:sf3b4 "splicing factor 3b, subunit 4"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-020419-22 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295 EMBL:AY099515
            IPI:IPI00495328 UniGene:Dr.1505 ProteinModelPortal:Q8JGT1
            SMR:Q8JGT1 STRING:Q8JGT1 InParanoid:Q8JGT1 ArrayExpress:Q8JGT1
            Uniprot:Q8JGT1
        Length = 400

 Score = 155 (59.6 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>FB|FBgn0085383 [details] [associations]
            symbol:CG34354 species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:AE014297 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GeneTree:ENSGT00680000099967
            KO:K13201 RefSeq:NP_001097953.1 UniGene:Dm.16369
            ProteinModelPortal:A8JPX0 SMR:A8JPX0 EnsemblMetazoa:FBtr0112564
            GeneID:5740528 KEGG:dme:Dmel_CG34354 UCSC:CG34354-RA
            FlyBase:FBgn0085383 InParanoid:A8JPX0 OMA:KDAFTPF OrthoDB:EOG4FFBJQ
            PhylomeDB:A8JPX0 GenomeRNAi:5740528 NextBio:20891566 Bgee:A8JPX0
            Uniprot:A8JPX0
        Length = 525

 Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 35/90 (38%), Positives = 50/90 (55%)

Query:    24 LPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMT 83
             L  N      + IFV +L+ E E   L   F PFG +   +V+RD QT K KG+GFV+  
Sbjct:    86 LVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFV 145

Query:    84 NYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
                EA  AI ++NG  LG+R ++ ++ T K
Sbjct:   146 KKSEAETAITAMNGQWLGSRSIRTNWATRK 175


>ZFIN|ZDB-GENE-000501-1 [details] [associations]
            symbol:celf1 "cugbp, Elav-like family member 1"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0045495 "pole plasm"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002343 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961
            PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-000501-1 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045495
            GeneTree:ENSGT00560000076837 EMBL:CR318601 EMBL:BX571680
            IPI:IPI00492280 Ensembl:ENSDART00000123170 Uniprot:E7F304
        Length = 535

 Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
 Identities = 35/78 (44%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  K FGFV+  N   +  AIQS+
Sbjct:   452 LFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSSQAAIQSM 511

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ +G + L+V  K +K
Sbjct:   512 NGFQIGMKRLKVQLKRSK 529


>UNIPROTKB|H9L019 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:AADN02044320 RefSeq:XP_423721.2 UniGene:Gga.51399
            ProteinModelPortal:H9L019 Ensembl:ENSGALT00000021786 GeneID:426042
            KEGG:gga:426042 Uniprot:H9L019
        Length = 418

 Score = 155 (59.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>UNIPROTKB|F1MWR2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 KO:K12831 OMA:VSETLLW CTD:10262
            EMBL:DAAA02007272 IPI:IPI00717302 RefSeq:NP_001192513.1
            UniGene:Bt.3914 ProteinModelPortal:F1MWR2
            Ensembl:ENSBTAT00000016577 GeneID:506123 KEGG:bta:506123
            NextBio:20867458 ArrayExpress:F1MWR2 Uniprot:F1MWR2
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>UNIPROTKB|E2R5T2 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:AAEX03011046 EMBL:AAEX03011045 RefSeq:XP_540295.3
            ProteinModelPortal:E2R5T2 Ensembl:ENSCAFT00000018450 GeneID:483177
            KEGG:cfa:483177 NextBio:20857615 Uniprot:E2R5T2
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>UNIPROTKB|Q15427 [details] [associations]
            symbol:SF3B4 "Splicing factor 3B subunit 4" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005689 "U12-type
            spliceosomal complex" evidence=IDA] [GO:0006397 "mRNA processing"
            evidence=TAS] [GO:0000375 "RNA splicing, via transesterification
            reactions" evidence=TAS] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;TAS] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380
            "RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            Reactome:REACT_71 InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005654
            GO:GO:0000166 Reactome:REACT_1675 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:CH471121 GO:GO:0000398 EMBL:AL591493 eggNOG:COG0724
            HOVERGEN:HBG002295 GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831
            EMBL:AL590487 OMA:VSETLLW EMBL:L35013 EMBL:BC004273 EMBL:BC013886
            EMBL:BC090883 IPI:IPI00017339 PIR:A54964 RefSeq:NP_005841.1
            UniGene:Hs.516160 PDB:1X5T PDB:1X5U PDBsum:1X5T PDBsum:1X5U
            ProteinModelPortal:Q15427 SMR:Q15427 IntAct:Q15427
            MINT:MINT-1032702 STRING:Q15427 PhosphoSite:Q15427 DMDM:2500587
            PaxDb:Q15427 PeptideAtlas:Q15427 PRIDE:Q15427 DNASU:10262
            Ensembl:ENST00000271628 Ensembl:ENST00000582851 GeneID:10262
            KEGG:hsa:10262 UCSC:uc001etk.2 CTD:10262 GeneCards:GC01M149895
            HGNC:HGNC:10771 HPA:HPA028578 MIM:154400 MIM:605593
            neXtProt:NX_Q15427 Orphanet:245 PharmGKB:PA35689 InParanoid:Q15427
            OrthoDB:EOG4M65JJ PhylomeDB:Q15427 EvolutionaryTrace:Q15427
            GenomeRNAi:10262 NextBio:38880 ArrayExpress:Q15427 Bgee:Q15427
            CleanEx:HS_SF3B4 Genevestigator:Q15427 GermOnline:ENSG00000143368
            Uniprot:Q15427
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>UNIPROTKB|F1SDG0 [details] [associations]
            symbol:SF3B4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00690000101901 GO:GO:0005689 KO:K12831 OMA:VSETLLW
            CTD:10262 EMBL:CU468464 RefSeq:XP_001926524.1 UniGene:Ssc.3222
            ProteinModelPortal:F1SDG0 Ensembl:ENSSSCT00000007303
            GeneID:100157814 KEGG:ssc:100157814 Uniprot:F1SDG0
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>MGI|MGI:109580 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:109580 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 CTD:10262
            OrthoDB:EOG4M65JJ EMBL:AK047751 EMBL:AK135543 EMBL:BC024418
            EMBL:BC026567 EMBL:BC085273 IPI:IPI00154082 RefSeq:NP_694693.1
            UniGene:Mm.219671 ProteinModelPortal:Q8QZY9 SMR:Q8QZY9
            IntAct:Q8QZY9 STRING:Q8QZY9 PhosphoSite:Q8QZY9 PaxDb:Q8QZY9
            PRIDE:Q8QZY9 Ensembl:ENSMUST00000076372 GeneID:107701
            KEGG:mmu:107701 UCSC:uc008qme.1 InParanoid:Q8QZY9 OMA:FASISHH
            NextBio:359278 Bgee:Q8QZY9 Genevestigator:Q8QZY9 Uniprot:Q8QZY9
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>RGD|1309667 [details] [associations]
            symbol:Sf3b4 "splicing factor 3b, subunit 4" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=ISO] [GO:0005689 "U12-type spliceosomal complex"
            evidence=IEA;ISO] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1309667 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 HSSP:Q15427 HOVERGEN:HBG002295
            GO:GO:0005689 HOGENOM:HOG000200535 KO:K12831 OMA:VSETLLW CTD:10262
            OrthoDB:EOG4M65JJ EMBL:BC078997 IPI:IPI00371860
            RefSeq:NP_001011951.1 UniGene:Rn.116275 ProteinModelPortal:Q6AYL5
            SMR:Q6AYL5 STRING:Q6AYL5 PRIDE:Q6AYL5 Ensembl:ENSRNOT00000028758
            GeneID:295270 KEGG:rno:295270 UCSC:RGD:1309667 InParanoid:Q6AYL5
            NextBio:639268 Genevestigator:Q6AYL5 Uniprot:Q6AYL5
        Length = 424

 Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 32/84 (38%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL PE +E +L+  F  FG + Q+ K++RD  T   KG+ F+   ++D +  AI++
Sbjct:   102 IFIGNLDPEIDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   162 MNGQYLCNRPITVSYAFKKDSKGE 185


>UNIPROTKB|F1PXQ8 [details] [associations]
            symbol:CELF5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13207
            GeneTree:ENSGT00560000076837 CTD:60680 OMA:DGMKDLD
            EMBL:AAEX03012581 RefSeq:XP_854891.3 Ensembl:ENSCAFT00000030591
            GeneID:612072 KEGG:cfa:612072 Uniprot:F1PXQ8
        Length = 485

 Score = 156 (60.0 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             +L      G   C +F+Y+L  E  ++ L Q+F PFG + S KV  D  TN+ K FGFV+
Sbjct:   388 LLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 447

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   448 FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 479


>UNIPROTKB|Q8N6W0 [details] [associations]
            symbol:CELF5 "CUGBP Elav-like family member 5" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH471139 HOVERGEN:HBG107646
            KO:K13207 eggNOG:NOG251494 OrthoDB:EOG4RJG30 EMBL:AB209067
            EMBL:AC005331 EMBL:AC006505 EMBL:AC010649 EMBL:AC123911
            EMBL:BC028101 EMBL:AF329266 EMBL:AF248649 IPI:IPI00171157
            IPI:IPI00853054 RefSeq:NP_001166144.1 RefSeq:NP_068757.2
            UniGene:Hs.655747 PDB:2DNH PDBsum:2DNH ProteinModelPortal:Q8N6W0
            SMR:Q8N6W0 STRING:Q8N6W0 PhosphoSite:Q8N6W0 DMDM:74762534
            PRIDE:Q8N6W0 DNASU:60680 Ensembl:ENST00000292672
            Ensembl:ENST00000541430 GeneID:60680 KEGG:hsa:60680 UCSC:uc002lxl.2
            UCSC:uc010dtj.2 CTD:60680 GeneCards:GC19P003224 HGNC:HGNC:14058
            HPA:HPA042012 MIM:612680 neXtProt:NX_Q8N6W0 PharmGKB:PA25429
            InParanoid:Q8N6W0 OMA:DGMKDLD PhylomeDB:Q8N6W0
            EvolutionaryTrace:Q8N6W0 GenomeRNAi:60680 NextBio:65500
            ArrayExpress:Q8N6W0 Bgee:Q8N6W0 CleanEx:HS_BRUNOL5
            Genevestigator:Q8N6W0 Uniprot:Q8N6W0
        Length = 485

 Score = 156 (60.0 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             +L      G   C +F+Y+L  E  ++ L Q+F PFG + S KV  D  TN+ K FGFV+
Sbjct:   388 LLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 447

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   448 FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPK 479


>UNIPROTKB|F1MD42 [details] [associations]
            symbol:F1MD42 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00560000076837 EMBL:DAAA02019657 EMBL:DAAA02019658
            EMBL:DAAA02019659 EMBL:DAAA02019660 EMBL:DAAA02019661
            IPI:IPI00713955 ProteinModelPortal:F1MD42
            Ensembl:ENSBTAT00000029023 OMA:PAQSPTM Uniprot:F1MD42
        Length = 489

 Score = 156 (60.0 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 36/92 (39%), Positives = 52/92 (56%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             +L      G   C +F+Y+L  E  ++ L Q+F PFG + S KV  D  TN+ K FGFV+
Sbjct:   392 LLQQQQREGPEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSKCFGFVS 451

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   452 FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 483

 Score = 94 (38.1 bits), Expect = 0.00087, P = 0.00087
 Identities = 27/76 (35%), Positives = 42/76 (55%)

Query:    24 LPANTMNGSG-WCIFVYNL-APETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             LP ++ +G G   +FV  L   ++EE VL +LF PFG +    V+R    +   G  FV 
Sbjct:   126 LPPSSPSGEGDRKLFVGMLNKQQSEEDVL-RLFQPFGVIDECTVLRGPDGSSKAGCAFVK 184

Query:    82 MTNYDEAVVAIQSLNG 97
              +++ EA  AI +L+G
Sbjct:   185 FSSHTEAQAAIHALHG 200


>UNIPROTKB|Q96B58 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein, isoform CRA_d" species:9606 "Homo sapiens" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:CH471053
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG002295
            HSSP:P11940 EMBL:AC016700 UniGene:Hs.413123 HGNC:HGNC:11802
            ChiTaRS:TIA1 EMBL:BC015944 IPI:IPI00743479 SMR:Q96B58 STRING:Q96B58
            Ensembl:ENST00000416149 UCSC:uc002sgm.3 Uniprot:Q96B58
        Length = 214

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>UNIPROTKB|F1SID9 [details] [associations]
            symbol:CELF1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043484 "regulation of RNA splicing" evidence=IEA]
            [GO:0042835 "BRE binding" evidence=IEA] [GO:0040018 "positive
            regulation of multicellular organism growth" evidence=IEA]
            [GO:0031369 "translation initiation factor binding" evidence=IEA]
            [GO:0007286 "spermatid development" evidence=IEA] [GO:0006376 "mRNA
            splice site selection" evidence=IEA] [GO:0003729 "mRNA binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0043484 GO:GO:0042835 GeneTree:ENSGT00560000076837
            EMBL:CU856103 Ensembl:ENSSSCT00000014453 OMA:INQPITQ Uniprot:F1SID9
        Length = 344

 Score = 152 (58.6 bits), Expect = 2.4e-10, P = 2.4e-10
 Identities = 37/81 (45%), Positives = 49/81 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTN--KCKGF-GFVTMTNYDEAVVAI 92
             +F+Y+L  E  +  L Q+F PFG V S KV  D QTN  KC G  GFV+  N   A  AI
Sbjct:   258 LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGHTGFVSYDNPVSAQAAI 317

Query:    93 QSLNGYALGNRILQVSFKTNK 113
             QS+NG+ +G + L+V  K +K
Sbjct:   318 QSMNGFQIGMKRLKVQLKRSK 338


>TAIR|locus:2080772 [details] [associations]
            symbol:EIF3G1 "eukaryotic translation initiation factor
            3G1" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS;TAS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006413 "translational
            initiation" evidence=TAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005852 "eukaryotic translation initiation factor
            3 complex" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=RCA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=RCA] [GO:0006606 "protein import into nucleus"
            evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
            [GO:0051788 "response to misfolded protein" evidence=RCA]
            [GO:0080129 "proteasome core complex assembly" evidence=RCA]
            InterPro:IPR000504 InterPro:IPR001878 InterPro:IPR012677
            InterPro:IPR017334 Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102
            SMART:SM00343 SMART:SM00360 GO:GO:0005886 EMBL:CP002686
            GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003743
            GO:GO:0005852 KO:K03248 OMA:SNLSEAM InterPro:IPR024675
            PANTHER:PTHR10352 Pfam:PF12353 IPI:IPI00938678
            RefSeq:NP_001154607.1 UniGene:At.25153 ProteinModelPortal:F4J6A1
            SMR:F4J6A1 PRIDE:F4J6A1 EnsemblPlants:AT3G11400.2 GeneID:820313
            KEGG:ath:AT3G11400 Uniprot:F4J6A1
        Length = 321

 Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
 Identities = 34/74 (45%), Positives = 44/74 (59%)

Query:    38 VYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNG 97
             V NL+ +T E  L +LF PFGAV  V V  D +T   +GFGFV   + ++A  AI  LNG
Sbjct:   244 VTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSREDAQRAINKLNG 303

Query:    98 YALGNRILQVSFKT 111
             Y   N IL+V + T
Sbjct:   304 YGYDNLILRVEWAT 317


>FB|FBgn0085391 [details] [associations]
            symbol:CG34362 species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014297 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0000381 GeneTree:ENSGT00680000099967
            RefSeq:NP_001163754.1 UniGene:Dm.13924 ProteinModelPortal:E1JIZ9
            SMR:E1JIZ9 EnsemblMetazoa:FBtr0301397 GeneID:43362
            KEGG:dme:Dmel_CG34362 FlyBase:FBgn0085391 GenomeRNAi:43362
            NextBio:833552 Bgee:E1JIZ9 Uniprot:E1JIZ9
        Length = 800

 Score = 156 (60.0 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 34/82 (41%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+ E E   L + F PFG +   +V+RD QT K KG+GFV+     EA  AI ++
Sbjct:   463 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 522

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG  LG+R ++ ++ T K   S
Sbjct:   523 NGQWLGSRSIRTNWATRKPPAS 544


>UNIPROTKB|P60826 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:10029 "Cricetulus griseus" [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 EMBL:AY359860 RefSeq:NP_001231002.1
            ProteinModelPortal:P60826 SMR:P60826 PRIDE:P60826 GeneID:100689075
            CTD:1153 Uniprot:P60826
        Length = 172

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>MGI|MGI:893588 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein"
            species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR
            binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006950 "response to
            stress" evidence=IEA] [GO:0009411 "response to UV" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017148
            "negative regulation of translation" evidence=IDA] [GO:0030371
            "translation repressor activity" evidence=IDA] [GO:0034063 "stress
            granule assembly" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=ISO] [GO:0048255 "mRNA stabilization"
            evidence=ISO] [GO:0070181 "SSU rRNA binding" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:893588 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 HOGENOM:HOG000276232 OMA:ENRSRGY
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:D78135 EMBL:AK014655
            EMBL:AK132584 EMBL:BC075699 IPI:IPI00121073 RefSeq:NP_031731.1
            UniGene:Mm.17898 ProteinModelPortal:P60824 SMR:P60824 STRING:P60824
            PhosphoSite:P60824 PaxDb:P60824 PRIDE:P60824
            Ensembl:ENSMUST00000105365 GeneID:12696 KEGG:mmu:12696
            UCSC:uc007gce.1 GeneTree:ENSGT00700000104309 InParanoid:P60824
            NextBio:281950 Bgee:P60824 CleanEx:MM_CIRBP Genevestigator:P60824
            GermOnline:ENSMUSG00000045193 Uniprot:P60824
        Length = 172

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>RGD|620756 [details] [associations]
            symbol:Cirbp "cold inducible RNA binding protein" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=ISO;ISS] [GO:0005634
            "nucleus" evidence=ISO;ISS] [GO:0005654 "nucleoplasm" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0009409 "response to
            cold" evidence=IEP] [GO:0009411 "response to UV" evidence=ISO;ISS]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO;ISS]
            [GO:0017148 "negative regulation of translation" evidence=ISO]
            [GO:0030371 "translation repressor activity" evidence=ISO;ISS]
            [GO:0034063 "stress granule assembly" evidence=ISO;ISS] [GO:0045727
            "positive regulation of translation" evidence=ISO;ISS] [GO:0048255
            "mRNA stabilization" evidence=ISO;ISS] [GO:0070181 "SSU rRNA
            binding" evidence=ISO;ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620756 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0000166 GO:GO:0030371
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724
            HOVERGEN:HBG107480 GO:GO:0070181 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309 EMBL:AB000362
            IPI:IPI00201031 UniGene:Rn.28931 ProteinModelPortal:P60825
            SMR:P60825 IntAct:P60825 STRING:P60825 PRIDE:P60825
            Ensembl:ENSRNOT00000021648 UCSC:RGD:620756 InParanoid:P60825
            Genevestigator:P60825 GermOnline:ENSRNOG00000015999 Uniprot:P60825
        Length = 172

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>WB|WBGene00004723 [details] [associations]
            symbol:sap-49 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0042127 "regulation of cell proliferation"
            evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
            [GO:0040022 "feminization of hermaphroditic germ-line"
            evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0009792 GO:GO:0008380 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0040011 GO:GO:0005681
            GO:GO:0003723 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 EMBL:Z46676
            GO:GO:0040020 NextBio:883379 GO:GO:0040022 eggNOG:COG0724
            GeneTree:ENSGT00690000101901 PIR:T19069 RefSeq:NP_001021932.1
            ProteinModelPortal:Q09442 SMR:Q09442 IntAct:Q09442 STRING:Q09442
            PaxDb:Q09442 EnsemblMetazoa:C08B11.5.1 EnsemblMetazoa:C08B11.5.2
            GeneID:4363023 KEGG:cel:CELE_C08B11.5 UCSC:C08B11.5.1 CTD:4363023
            WormBase:C08B11.5 InParanoid:Q09442 OMA:VSETLLW ArrayExpress:Q09442
            Uniprot:Q09442
        Length = 388

 Score = 150 (57.9 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSV-KVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IFV NL PE +E +L+  F  FG +  V K++RD+ +   KGF F+   +++ +  A+++
Sbjct:   102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   + +KG+
Sbjct:   162 MNGQFLCNRAITVSYAFKRDSKGE 185

 Score = 103 (41.3 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             I+V  L  +  ES+LW+L    G V SV + +D  T   +GFGFV     ++A  AI+ L
Sbjct:    15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query:    96 NGYALGNRILQVS 108
             N   L  + ++V+
Sbjct:    75 NMIKLYGKPIKVN 87


>UNIPROTKB|Q09442 [details] [associations]
            symbol:sap-49 "Splicing factor 3B subunit 4" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0040011
            GO:GO:0005681 GO:GO:0003723 GO:GO:0042127 GO:GO:0040035
            GO:GO:0007281 EMBL:Z46676 GO:GO:0040020 NextBio:883379
            GO:GO:0040022 eggNOG:COG0724 GeneTree:ENSGT00690000101901
            PIR:T19069 RefSeq:NP_001021932.1 ProteinModelPortal:Q09442
            SMR:Q09442 IntAct:Q09442 STRING:Q09442 PaxDb:Q09442
            EnsemblMetazoa:C08B11.5.1 EnsemblMetazoa:C08B11.5.2 GeneID:4363023
            KEGG:cel:CELE_C08B11.5 UCSC:C08B11.5.1 CTD:4363023
            WormBase:C08B11.5 InParanoid:Q09442 OMA:VSETLLW ArrayExpress:Q09442
            Uniprot:Q09442
        Length = 388

 Score = 150 (57.9 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 30/84 (35%), Positives = 52/84 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSV-KVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IFV NL PE +E +L+  F  FG +  V K++RD+ +   KGF F+   +++ +  A+++
Sbjct:   102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEA 161

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   + +KG+
Sbjct:   162 MNGQFLCNRAITVSYAFKRDSKGE 185

 Score = 103 (41.3 bits), Expect = 6.7e-05, P = 6.7e-05
 Identities = 26/73 (35%), Positives = 40/73 (54%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             I+V  L  +  ES+LW+L    G V SV + +D  T   +GFGFV     ++A  AI+ L
Sbjct:    15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74

Query:    96 NGYALGNRILQVS 108
             N   L  + ++V+
Sbjct:    75 NMIKLYGKPIKVN 87


>WB|WBGene00000774 [details] [associations]
            symbol:cpf-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0016607 "nuclear speck"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009792 GO:GO:0006898
            GO:GO:0016246 GO:GO:0000166 GO:GO:0016607 Gene3D:3.30.70.330
            GO:GO:0000003 GO:GO:0003676 GO:GO:0040027 eggNOG:COG0724 KO:K14407
            InterPro:IPR025742 InterPro:IPR026896 Pfam:PF14327 Pfam:PF14304
            GeneTree:ENSGT00550000074641 HSSP:P33240 EMBL:Z83230 PIR:T22767
            RefSeq:NP_499734.1 ProteinModelPortal:O45577 SMR:O45577
            DIP:DIP-27144N IntAct:O45577 MINT:MINT-1049050 STRING:O45577
            PaxDb:O45577 EnsemblMetazoa:F56A8.6.1 EnsemblMetazoa:F56A8.6.2
            GeneID:176742 KEGG:cel:CELE_F56A8.6 UCSC:F56A8.6.1 CTD:176742
            WormBase:F56A8.6 HOGENOM:HOG000214372 InParanoid:O45577 OMA:VENPYGE
            NextBio:893824 Uniprot:O45577
        Length = 336

 Score = 148 (57.2 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 29/72 (40%), Positives = 45/72 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV N++ +  E  +  +F   G V S+K++ D +T K KG+GF+   +   A VAI++L
Sbjct:    20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79

Query:    96 NGYALGNRILQV 107
             NGY L  RIL+V
Sbjct:    80 NGYELSGRILRV 91


>UNIPROTKB|D4A7H4 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00214634 ProteinModelPortal:D4A7H4
            Ensembl:ENSRNOT00000023323 Uniprot:D4A7H4
        Length = 281

 Score = 146 (56.5 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AIQ +
Sbjct:    93 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 152

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   153 GGQWLGGRQIRTNWATRK 170


>UNIPROTKB|C9JTN7 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOGENOM:HOG000206748
            EMBL:AC016700 HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00927286
            ProteinModelPortal:C9JTN7 SMR:C9JTN7 STRING:C9JTN7
            Ensembl:ENST00000445587 ArrayExpress:C9JTN7 Bgee:C9JTN7
            Uniprot:C9JTN7
        Length = 285

 Score = 146 (56.5 bits), Expect = 6.5e-10, P = 6.5e-10
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AIQ +
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   157 GGQWLGGRQIRTNWATRK 174


>WB|WBGene00001340 [details] [associations]
            symbol:etr-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
            "body morphogenesis" evidence=IMP] [GO:0048477 "oogenesis"
            evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0040002 "collagen and
            cuticulin-based cuticle development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] [GO:0061199 "striated muscle contraction involved in
            embryonic body morphogenesis" evidence=IMP] [GO:0008340
            "determination of adult lifespan" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0008340
            GO:GO:0009792 GO:GO:0018991 GO:GO:0006915 GO:GO:0002119
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0010171 GO:GO:0040011
            GO:GO:0048477 GO:GO:0003676 GO:GO:0040002 KO:K13207
            HOGENOM:HOG000004754 GeneTree:ENSGT00560000076837 EMBL:FO081419
            UniGene:Cel.5079 GeneID:173401 KEGG:cel:CELE_T01D1.2
            UCSC:T01D1.2a.1 CTD:173401 NextBio:879497 RefSeq:NP_001122631.1
            ProteinModelPortal:A8DYS0 SMR:A8DYS0 IntAct:A8DYS0 STRING:A8DYS0
            EnsemblMetazoa:T01D1.2f.1 EnsemblMetazoa:T01D1.2f.2
            EnsemblMetazoa:T01D1.2f.3 EnsemblMetazoa:T01D1.2f.4
            EnsemblMetazoa:T01D1.2f.5 EnsemblMetazoa:T01D1.2f.6
            WormBase:T01D1.2f InParanoid:A8DYS0 ArrayExpress:A8DYS0
            Uniprot:A8DYS0
        Length = 588

 Score = 152 (58.6 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y+L  +  +S L   F PFG + S KV  D  TN  K FGFV+  N   A  AI ++
Sbjct:   505 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 564

Query:    96 NGYALGNRILQVSFKTNKG 114
             NG+ +G++ L+V  K ++G
Sbjct:   565 NGFQIGSKRLKVQLKVDRG 583

 Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query:    25 PANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 84
             PA+T N +   +F+  L+ +  E  L ++F  FG ++   V+RD Q  K +G  FVT TN
Sbjct:   133 PADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTN 191

Query:    85 YDEAVVAIQSLN 96
                AVVA + ++
Sbjct:   192 RSCAVVATKEMH 203


>UNIPROTKB|Q3SZN4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 eggNOG:COG0724 GO:GO:0070181 KO:K13195 CTD:1153
            HOGENOM:HOG000276232 OMA:ENRSRGY OrthoDB:EOG4HHP40
            GeneTree:ENSGT00700000104309 EMBL:DAAA02020258 EMBL:BC102773
            IPI:IPI00702406 RefSeq:NP_001029450.1 UniGene:Bt.23273 SMR:Q3SZN4
            Ensembl:ENSBTAT00000004477 GeneID:507120 KEGG:bta:507120
            InParanoid:Q3SZN4 NextBio:20867909 Uniprot:Q3SZN4
        Length = 213

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|E2R6G2 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            ProteinModelPortal:E2R6G2 Ensembl:ENSCAFT00000031013 Uniprot:E2R6G2
        Length = 172

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|F6XHA7 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 KO:K13195 CTD:1153
            OMA:ENRSRGY GeneTree:ENSGT00700000104309 Ensembl:ENSCAFT00000031013
            EMBL:AAEX03012655 RefSeq:XP_868600.1 GeneID:476755 KEGG:cfa:476755
            Uniprot:F6XHA7
        Length = 185

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|K7EJV5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588411 Uniprot:K7EJV5
        Length = 105

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|K7EMY9 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000586548 Uniprot:K7EMY9
        Length = 159

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|K7EPM4 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585913 Ensembl:ENST00000586636
            Ensembl:ENST00000586773 Ensembl:ENST00000589235
            Ensembl:ENST00000589686 Ensembl:ENST00000591935 Uniprot:K7EPM4
        Length = 168

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|K7EQR7 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000585914 Uniprot:K7EQR7
        Length = 202

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|K7ER40 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000591659 Uniprot:K7ER40
        Length = 174

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|Q14011 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISS;IDA] [GO:0048255 "mRNA stabilization"
            evidence=IDA] [GO:0070181 "SSU rRNA binding" evidence=IDA]
            [GO:0030371 "translation repressor activity" evidence=ISS]
            [GO:0034063 "stress granule assembly" evidence=ISS] [GO:0009411
            "response to UV" evidence=IDA] [GO:0010494 "cytoplasmic stress
            granule" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003730 "mRNA
            3'-UTR binding" evidence=IDA] [GO:0045727 "positive regulation of
            translation" evidence=IDA] [GO:0009409 "response to cold"
            evidence=TAS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0000166 GO:GO:0030371 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0010494 GO:GO:0034063 eggNOG:COG0724 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:D78134 EMBL:AF021336
            EMBL:AC004258 EMBL:BC000403 EMBL:BC000901 IPI:IPI00641579
            RefSeq:NP_001271.1 UniGene:Hs.618145 UniGene:Hs.634522 PDB:1X5S
            PDBsum:1X5S ProteinModelPortal:Q14011 SMR:Q14011 IntAct:Q14011
            MINT:MINT-5004534 STRING:Q14011 PhosphoSite:Q14011 DMDM:5921786
            REPRODUCTION-2DPAGE:IPI00180954 PaxDb:Q14011 PRIDE:Q14011
            DNASU:1153 Ensembl:ENST00000320936 GeneID:1153 KEGG:hsa:1153
            UCSC:uc002lrr.4 GeneCards:GC19P001269 HGNC:HGNC:1982 MIM:602649
            neXtProt:NX_Q14011 PharmGKB:PA26519 HOGENOM:HOG000276232
            InParanoid:Q14011 OMA:ENRSRGY OrthoDB:EOG4HHP40 PhylomeDB:Q14011
            ChiTaRS:CIRBP EvolutionaryTrace:Q14011 GenomeRNAi:1153 NextBio:4788
            ArrayExpress:Q14011 Bgee:Q14011 CleanEx:HS_CIRBP
            Genevestigator:Q14011 GermOnline:ENSG00000099622 Uniprot:Q14011
        Length = 172

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|F1S6R1 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070181 "SSU rRNA binding" evidence=IEA] [GO:0048255
            "mRNA stabilization" evidence=IEA] [GO:0045727 "positive regulation
            of translation" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0009411 "response to UV" evidence=IEA]
            [GO:0003730 "mRNA 3'-UTR binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009411 GO:GO:0000166 GO:GO:0030371 Gene3D:3.30.70.330
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0010494
            GO:GO:0034063 GO:GO:0070181 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:CU929580
            Ensembl:ENSSSCT00000014671 Uniprot:F1S6R1
        Length = 172

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|Q5RF83 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9601 "Pongo abelii" [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0017148 "negative regulation of translation"
            evidence=ISS] [GO:0030371 "translation repressor activity"
            evidence=ISS] [GO:0034063 "stress granule assembly" evidence=ISS]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=ISS] [GO:0070181 "SSU
            rRNA binding" evidence=ISS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0009411 GO:GO:0005654 GO:GO:0006950 GO:GO:0000166
            GO:GO:0030371 Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0010494 GO:GO:0034063 HOVERGEN:HBG107480
            GO:GO:0070181 KO:K13195 CTD:1153 EMBL:CR857278
            RefSeq:NP_001124692.1 UniGene:Pab.19491 ProteinModelPortal:Q5RF83
            SMR:Q5RF83 PRIDE:Q5RF83 GeneID:100171539 KEGG:pon:100171539
            Uniprot:Q5RF83
        Length = 172

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>TAIR|locus:2046298 [details] [associations]
            symbol:emb2444 "embryo defective 2444" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=NAS] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002685 GO:GO:0005730 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC006135 HSSP:P11940
            KO:K12831 EMBL:AY150466 IPI:IPI00516901 PIR:B84565
            RefSeq:NP_179441.1 UniGene:At.20306 ProteinModelPortal:Q9ZU66
            SMR:Q9ZU66 STRING:Q9ZU66 PRIDE:Q9ZU66 EnsemblPlants:AT2G18510.1
            GeneID:816366 KEGG:ath:AT2G18510 TAIR:At2g18510 InParanoid:Q9ZU66
            OMA:FIEYRSE PhylomeDB:Q9ZU66 ProtClustDB:CLSN2683050
            Genevestigator:Q9ZU66 Uniprot:Q9ZU66
        Length = 363

 Score = 148 (57.2 bits), Expect = 7.4e-10, P = 7.4e-10
 Identities = 30/84 (35%), Positives = 51/84 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQS-VKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             +F+ NL P+ +E +L+  F  FG + S  K++RD  T   +GFGF++  +++ +  AI+S
Sbjct:   114 LFIGNLDPDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIES 173

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             + G  L NR + VS+   K  KG+
Sbjct:   174 MTGQYLSNRQITVSYAYKKDTKGE 197

 Score = 102 (41.0 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 26/82 (31%), Positives = 46/82 (56%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V  L  +  E +LW+LF   G V +V V +D  TN  + +GF+   + ++A  AI+ L
Sbjct:    27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             N   L  + ++V+ K ++ K S
Sbjct:    87 NMIKLHGKPIRVN-KASQDKKS 107


>TAIR|locus:2153659 [details] [associations]
            symbol:EIF3G2 "eukaryotic translation initiation factor
            3G2" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0003743
            "translation initiation factor activity" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0006413 "translational initiation"
            evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005852 "eukaryotic translation initiation factor 3 complex"
            evidence=ISS] [GO:0006333 "chromatin assembly or disassembly"
            evidence=RCA] [GO:0006606 "protein import into nucleus"
            evidence=RCA] [GO:0042991 "transcription factor import into
            nucleus" evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 InterPro:IPR017334 Pfam:PF00076
            PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00343 SMART:SM00360
            EMBL:CP002688 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
            GO:GO:0003743 GO:GO:0005852 EMBL:AB017060 KO:K03248
            InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            HOGENOM:HOG000239560 HSSP:P11940 IPI:IPI00528477 RefSeq:NP_196219.3
            UniGene:At.20561 ProteinModelPortal:Q9FI86 SMR:Q9FI86 STRING:Q9FI86
            PRIDE:Q9FI86 EnsemblPlants:AT5G06000.1 GeneID:830487
            KEGG:ath:AT5G06000 TAIR:At5g06000 InParanoid:Q9FI86 OMA:KFNDEGK
            PhylomeDB:Q9FI86 ProtClustDB:CLSN2925586 Genevestigator:Q9FI86
            Uniprot:Q9FI86
        Length = 308

 Score = 146 (56.5 bits), Expect = 8.2e-10, P = 8.2e-10
 Identities = 33/76 (43%), Positives = 45/76 (59%)

Query:    38 VYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNG 97
             V NL+ +T    L +LF PFGAV    V  D +T+  +GFGFV+  + ++A  AI  LNG
Sbjct:   210 VTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFVSFVSREDAQRAINKLNG 269

Query:    98 YALGNRILQVSFKTNK 113
             Y   N IL+V + T K
Sbjct:   270 YGYDNLILRVEWSTPK 285


>UNIPROTKB|P98179 [details] [associations]
            symbol:RBM3 "Putative RNA-binding protein 3" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006412 "translation"
            evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0043023 "ribosomal large subunit binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0030425
            "dendrite" evidence=ISS] [GO:0006417 "regulation of translation"
            evidence=ISS] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0015934
            "large ribosomal subunit" evidence=ISS] [GO:0006396 "RNA
            processing" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0006396
            GO:GO:0045727 eggNOG:COG0724 GO:GO:0015934 HOVERGEN:HBG107480
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GO:GO:0035196 EMBL:AF196969
            GO:GO:0043023 EMBL:U28686 EMBL:BC006825 IPI:IPI00024320 PIR:G01859
            RefSeq:NP_006734.1 UniGene:Hs.301404 ProteinModelPortal:P98179
            SMR:P98179 IntAct:P98179 MINT:MINT-5002714 STRING:P98179
            PhosphoSite:P98179 DMDM:1710620 PaxDb:P98179 PeptideAtlas:P98179
            PRIDE:P98179 DNASU:5935 Ensembl:ENST00000376755
            Ensembl:ENST00000376759 GeneID:5935 KEGG:hsa:5935 UCSC:uc004dkf.2
            CTD:5935 GeneCards:GC0XP048432 HGNC:HGNC:9900 HPA:HPA003624
            MIM:300027 neXtProt:NX_P98179 PharmGKB:PA34265 InParanoid:P98179
            KO:K13186 OMA:SDAMRAM PhylomeDB:P98179 ChiTaRS:RBM3 GenomeRNAi:5935
            NextBio:23136 ArrayExpress:P98179 Bgee:P98179 CleanEx:HS_RBM3
            Genevestigator:P98179 GermOnline:ENSG00000102317 Uniprot:P98179
        Length = 157

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 28/72 (38%), Positives = 45/72 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A VA++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>DICTYBASE|DDB_G0270634 [details] [associations]
            symbol:DDB_G0270634 "putative splicing regulator"
            species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
            vesicle" evidence=IDA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            dictyBase:DDB_G0270634 EMBL:AAFI02000005 GO:GO:0045335
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            RefSeq:XP_646268.1 ProteinModelPortal:Q55D63
            EnsemblProtists:DDB0233675 GeneID:8617224 KEGG:ddi:DDB_G0270634
            InParanoid:Q55D63 OMA:CAFITFS ProtClustDB:CLSZ2497105
            Uniprot:Q55D63
        Length = 368

 Score = 147 (56.8 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 34/78 (43%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+Y L     +  L QLF P+G V S KV  D  T + K FGFV+  N   A+ AIQ L
Sbjct:   289 LFIYYLPFTYGDEELKQLFAPYGNVISSKVFIDKNTQQSKCFGFVSYDNTQSAIAAIQEL 348

Query:    96 NGYALGNRILQVSFKTNK 113
             NG A+  + L+V+FK  K
Sbjct:   349 NGRAIEGKKLKVNFKREK 366

 Score = 111 (44.1 bits), Expect = 8.3e-06, P = 8.3e-06
 Identities = 27/85 (31%), Positives = 46/85 (54%)

Query:    33 GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAI 92
             G+ +FV ++     E  + Q+F  FG +  + +I+D +TN  KG  F+T +  +EA  A+
Sbjct:    17 GFTVFVGHIPSSMNEEGVSQIFNKFGNILDITIIKDKRTNVSKGCAFITFSTKEEADNAL 76

Query:    93 QSLN--GYALGN--RILQVSFKTNK 113
              + N  G  L N  + LQV +  N+
Sbjct:    77 NTTNESGTFLENMNKPLQVKYSDNE 101


>UNIPROTKB|D4A6U8 [details] [associations]
            symbol:Tia1 "Protein Tia1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1305742 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036 GO:GO:0048024
            OrthoDB:EOG4B5P59 IPI:IPI00778030 ProteinModelPortal:D4A6U8
            Ensembl:ENSRNOT00000041366 Uniprot:D4A6U8
        Length = 382

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    88 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 147

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   148 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 181


>UNIPROTKB|K7ENX8 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000589266 Uniprot:K7ENX8
        Length = 89

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 27/72 (37%), Positives = 46/72 (63%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQV 107
             NG ++  R ++V
Sbjct:    68 NGKSVDGRQIRV 79


>UNIPROTKB|Q0VBZ6 [details] [associations]
            symbol:TIA1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:9913 "Bos taurus" [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0042036 "negative
            regulation of cytokine biosynthetic process" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 eggNOG:COG0724 GeneTree:ENSGT00680000099967
            HOGENOM:HOG000206748 KO:K13201 CTD:7072 HOVERGEN:HBG105006
            OrthoDB:EOG4B5P59 OMA:TSAPWMG EMBL:DAAA02031534 EMBL:BC120427
            IPI:IPI00707848 RefSeq:NP_001069577.1 UniGene:Bt.91654 SMR:Q0VBZ6
            Ensembl:ENSBTAT00000025528 GeneID:538533 KEGG:bta:538533
            InParanoid:Q0VBZ6 NextBio:20877426 Uniprot:Q0VBZ6
        Length = 384

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>UNIPROTKB|F8W8I6 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC016700
            HGNC:HGNC:11802 ChiTaRS:TIA1 IPI:IPI00926358
            ProteinModelPortal:F8W8I6 SMR:F8W8I6 PRIDE:F8W8I6
            Ensembl:ENST00000282574 ArrayExpress:F8W8I6 Bgee:F8W8I6
            Uniprot:F8W8I6
        Length = 385

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>UNIPROTKB|P31483 [details] [associations]
            symbol:TIA1 "Nucleolysin TIA-1 isoform p40" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0017091 "AU-rich
            element binding" evidence=IEA] [GO:0017148 "negative regulation of
            translation" evidence=IEA] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048024 "regulation of mRNA splicing, via spliceosome"
            evidence=IDA] [GO:0006917 "induction of apoptosis" evidence=TAS]
            [GO:0008143 "poly(A) RNA binding" evidence=TAS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006915 EMBL:CH471053
            GO:GO:0006917 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            GO:GO:0008143 HOGENOM:HOG000206748 KO:K13201 EMBL:M77142
            EMBL:S70114 EMBL:AC016700 IPI:IPI00291398 IPI:IPI00333996
            PIR:A39293 RefSeq:NP_071320.2 RefSeq:NP_071505.2 UniGene:Hs.413123
            PDB:3BS9 PDBsum:3BS9 ProteinModelPortal:P31483 SMR:P31483
            IntAct:P31483 STRING:P31483 PhosphoSite:P31483 DMDM:206729905
            PaxDb:P31483 PRIDE:P31483 Ensembl:ENST00000415783
            Ensembl:ENST00000433529 GeneID:7072 KEGG:hsa:7072 UCSC:uc002sgj.4
            UCSC:uc002sgk.4 CTD:7072 GeneCards:GC02M070437 HGNC:HGNC:11802
            MIM:603518 neXtProt:NX_P31483 PharmGKB:PA36511 HOVERGEN:HBG105006
            InParanoid:P31483 OrthoDB:EOG4B5P59 PhylomeDB:P31483 ChiTaRS:TIA1
            EvolutionaryTrace:P31483 GenomeRNAi:7072 NextBio:27655
            ArrayExpress:P31483 Bgee:P31483 CleanEx:HS_TIA1
            Genevestigator:P31483 GermOnline:ENSG00000116001 Uniprot:P31483
        Length = 386

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>MGI|MGI:107914 [details] [associations]
            symbol:Tia1 "cytotoxic granule-associated RNA binding protein
            1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IDA] [GO:0017091 "AU-rich element binding"
            evidence=IDA] [GO:0017148 "negative regulation of translation"
            evidence=IMP] [GO:0042036 "negative regulation of cytokine
            biosynthetic process" evidence=IMP] [GO:0048024 "regulation of mRNA
            splicing, via spliceosome" evidence=ISO] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            MGI:MGI:107914 GO:GO:0005634 GO:GO:0006915 GO:GO:0017148
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0042036
            GO:GO:0048024 GO:GO:0010494 eggNOG:COG0724 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:U00689
            EMBL:U55862 IPI:IPI00132462 PIR:S72435 RefSeq:NP_035715.1
            UniGene:Mm.333219 PDB:2DGO PDB:2RNE PDBsum:2DGO PDBsum:2RNE
            ProteinModelPortal:P52912 SMR:P52912 STRING:P52912
            PhosphoSite:P52912 PaxDb:P52912 PRIDE:P52912
            Ensembl:ENSMUST00000095753 GeneID:21841 KEGG:mmu:21841
            InParanoid:P52912 OMA:TSAPWMG EvolutionaryTrace:P52912
            NextBio:301304 Bgee:P52912 Genevestigator:P52912
            GermOnline:ENSMUSG00000071337 Uniprot:P52912
        Length = 386

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>UNIPROTKB|F1PWU8 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 OMA:TSAPWMG EMBL:AAEX03007635
            EMBL:AAEX03007634 Ensembl:ENSCAFT00000005363 Uniprot:F1PWU8
        Length = 393

 Score = 147 (56.8 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 31/94 (32%), Positives = 53/94 (56%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             +SS + +   +   + +FV +L+PE     +   F PFG +   +V++D+ T K KG+GF
Sbjct:    92 SSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGF 151

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             V+  N  +A  AIQ + G  LG R ++ ++ T K
Sbjct:   152 VSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRK 185


>TAIR|locus:2122009 [details] [associations]
            symbol:RBP31 "AT4G24770" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA;TAS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0045087 "innate
            immune response" evidence=IDA] [GO:0008266 "poly(U) RNA binding"
            evidence=IDA] [GO:0009451 "RNA modification" evidence=IMP]
            [GO:0009073 "aromatic amino acid family biosynthetic process"
            evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
            [GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
            [GO:0030154 "cell differentiation" evidence=RCA] [GO:0045036
            "protein targeting to chloroplast" evidence=RCA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0009631 "cold acclimation" evidence=IMP] [GO:0016553 "base
            conversion or substitution editing" evidence=IMP] [GO:0043489 "RNA
            stabilization" evidence=IMP] [GO:0006396 "RNA processing"
            evidence=TAS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0009570 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008266 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 GO:GO:0009631
            GO:GO:0016553 GO:GO:0006396 GO:GO:0030529 EMBL:AL035356
            EMBL:AL161562 GO:GO:0009535 eggNOG:COG0724 HOGENOM:HOG000276232
            EMBL:M94554 EMBL:X65255 EMBL:U08467 EMBL:D31712 EMBL:D31713
            IPI:IPI00523699 IPI:IPI00542634 IPI:IPI00760320 PIR:S28057
            PIR:S53492 RefSeq:NP_194208.1 UniGene:At.38112 UniGene:At.70990
            ProteinModelPortal:Q04836 SMR:Q04836 STRING:Q04836 PaxDb:Q04836
            PRIDE:Q04836 ProMEX:Q04836 EnsemblPlants:AT4G24770.1 GeneID:828579
            KEGG:ath:AT4G24770 GeneFarm:4009 TAIR:At4g24770 InParanoid:Q04836
            OMA:NRYDLNG PhylomeDB:Q04836 ProtClustDB:CLSN2915857
            Genevestigator:Q04836 GermOnline:AT4G24770 GO:GO:0043489
            Uniprot:Q04836
        Length = 329

 Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 31/79 (39%), Positives = 47/79 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV NLA +     L  LF   G V+  +VI + +T++ +GFGFVTM++ DEA  A++  
Sbjct:   152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211

Query:    96 NGYALGNRILQVSFKTNKG 114
             N Y L  R+L V+    +G
Sbjct:   212 NRYDLNGRLLTVNKAAPRG 230

 Score = 130 (50.8 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 28/73 (38%), Positives = 44/73 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V NL  + +   L QLF   G V   +V+ D +T + +GFGFVTM++ DE   AI +L
Sbjct:   246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305

Query:    96 NGYALGNRILQVS 108
             +G  L  R ++V+
Sbjct:   306 DGQNLEGRAIRVN 318


>UNIPROTKB|Q800W4 [details] [associations]
            symbol:TIA1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0017091 "AU-rich element binding" evidence=IEA]
            [GO:0017148 "negative regulation of translation" evidence=IEA]
            [GO:0042036 "negative regulation of cytokine biosynthetic process"
            evidence=IEA] [GO:0048024 "regulation of mRNA splicing, via
            spliceosome" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005737 GO:GO:0017148 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0042036 GO:GO:0048024 eggNOG:COG0724
            HSSP:P11940 GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748
            KO:K13201 CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:TSAPWMG
            UniGene:Gga.12064 UniGene:Gga.8269 EMBL:AADN02059907
            EMBL:AADN02059908 EMBL:AADN02059909 EMBL:AY189903 IPI:IPI00577572
            RefSeq:NP_001244132.1 SMR:Q800W4 STRING:Q800W4
            Ensembl:ENSGALT00000022506 GeneID:771327 KEGG:gga:771327
            InParanoid:Q800W4 NextBio:20921528 Uniprot:Q800W4
        Length = 372

 Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AIQ +
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   157 GGQWLGGRQIRTNWATRK 174


>RGD|1305742 [details] [associations]
            symbol:Tia1 "TIA1 cytotoxic granule-associated RNA binding
            protein" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA;ISO] [GO:0017091 "AU-rich element
            binding" evidence=IEA;ISO] [GO:0017148 "negative regulation of
            translation" evidence=IEA;ISO] [GO:0042036 "negative regulation of
            cytokine biosynthetic process" evidence=IEA;ISO] [GO:0048024
            "regulation of mRNA splicing, via spliceosome" evidence=IEA;ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1305742 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CH473957 eggNOG:COG0724
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 EMBL:BC087064 IPI:IPI00563419
            RefSeq:NP_001012096.1 UniGene:Rn.198158 SMR:Q5PQR7 STRING:Q5PQR7
            Ensembl:ENSRNOT00000023103 GeneID:312510 KEGG:rno:312510
            UCSC:RGD:1305742 NextBio:664964 Genevestigator:Q5PQR7
            Uniprot:Q5PQR7
        Length = 375

 Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AIQ +
Sbjct:    97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   157 GGQWLGGRQIRTNWATRK 174


>UNIPROTKB|Q9DED4 [details] [associations]
            symbol:cirbp-b "Cold-inducible RNA-binding protein B"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007369
            "gastrulation" evidence=IMP] [GO:0009409 "response to cold"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0019899 "enzyme
            binding" evidence=IPI] [GO:0022008 "neurogenesis" evidence=IMP]
            [GO:0045727 "positive regulation of translation" evidence=ISS]
            [GO:0048255 "mRNA stabilization" evidence=IGI;IMP] [GO:0048793
            "pronephros development" evidence=ISS] [GO:0060212 "negative
            regulation of nuclear-transcribed mRNA poly(A) tail shortening"
            evidence=IMP] [GO:0005840 "ribosome" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480 GO:GO:0060212
            EMBL:AB044535 EMBL:BC054250 RefSeq:NP_001079794.1 UniGene:Xl.8151
            HSSP:P09651 ProteinModelPortal:Q9DED4 SMR:Q9DED4 MINT:MINT-274223
            PRIDE:Q9DED4 GeneID:379484 KEGG:xla:379484 CTD:379484
            Xenbase:XB-GENE-492785 KO:K13195 Uniprot:Q9DED4
        Length = 166

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/82 (36%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L  +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     7 LFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMAM 66

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG A+  R ++V      GK+S
Sbjct:    67 NGKAVDGRQIRVD---QAGKSS 85


>ZFIN|ZDB-GENE-030131-1506 [details] [associations]
            symbol:tia1 "cytotoxic granule-associated RNA
            binding protein 1" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 ZFIN:ZDB-GENE-030131-1506 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HSSP:P11940
            GeneTree:ENSGT00680000099967 HOGENOM:HOG000206748 KO:K13201
            CTD:7072 HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 OMA:WAVEPGQ
            EMBL:CT027545 EMBL:AL928954 EMBL:BC045368 IPI:IPI00511851
            RefSeq:NP_997793.1 UniGene:Dr.159520 SMR:Q7ZVY0
            Ensembl:ENSDART00000074400 GeneID:793165 KEGG:dre:793165
            InParanoid:Q7ZVY0 NextBio:20931339 Uniprot:Q7ZVY0
        Length = 386

 Score = 146 (56.5 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/78 (37%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AIQ +
Sbjct:    98 VFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 157

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   158 GGQWLGGRQIRTNWATRK 175


>UNIPROTKB|G4N7J4 [details] [associations]
            symbol:MGG_06400 "Nuclear and cytoplasmic polyadenylated
            RNA-binding protein pub1" species:242507 "Magnaporthe oryzae 70-15"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:CM001234
            KO:K13201 RefSeq:XP_003717170.1 ProteinModelPortal:G4N7J4
            EnsemblFungi:MGG_06400T0 GeneID:2684555 KEGG:mgr:MGG_06400
            Uniprot:G4N7J4
        Length = 479

 Score = 147 (56.8 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 33/98 (33%), Positives = 58/98 (59%)

Query:    20 ASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGF 79
             A+S    +T N   + IFV +L+ E  + VL Q F  FG+V   +V+ D++T + +G+GF
Sbjct:   164 ATSATKEDTSNH--FHIFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGF 221

Query:    80 VTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             V   +  +A  A+ S++G  LG+R ++ ++   KG+ S
Sbjct:   222 VAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 259

 Score = 97 (39.2 bits), Expect = 0.00040, P = 0.00040
 Identities = 27/81 (33%), Positives = 41/81 (50%)

Query:    37 FVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLN 96
             +V NL P T  + +  LF  FG V   +   D      +GF F+ M +++ A  AI  LN
Sbjct:   305 YVGNLTPYTTANDVVPLFQNFGYVVESRFQAD------RGFAFIKMDSHENAAQAICGLN 358

Query:    97 GYALGNRILQVSFKTNKGKTS 117
             GY +  R L+ S+  +K  T+
Sbjct:   359 GYNVNGRPLKCSWGKDKNSTN 379


>TAIR|locus:2087457 [details] [associations]
            symbol:AT3G14100 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005829 "cytosol" evidence=RCA] [GO:0006007
            "glucose catabolic process" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AP000600 HSSP:P33240 KO:K13201 OMA:WAVEPGQ EMBL:AY139775
            EMBL:BT004540 IPI:IPI00517194 RefSeq:NP_188026.1 UniGene:At.22594
            UniGene:At.70203 ProteinModelPortal:Q9LJH8 SMR:Q9LJH8 IntAct:Q9LJH8
            STRING:Q9LJH8 PRIDE:Q9LJH8 EnsemblPlants:AT3G14100.1 GeneID:820626
            KEGG:ath:AT3G14100 TAIR:At3g14100 InParanoid:Q9LJH8
            PhylomeDB:Q9LJH8 ProtClustDB:CLSN2682164 Genevestigator:Q9LJH8
            Uniprot:Q9LJH8
        Length = 427

 Score = 146 (56.5 bits), Expect = 1.7e-09, P = 1.7e-09
 Identities = 31/82 (37%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+PE  ++ L+Q F  F +    +V+ D +T + +GFGFV+  N  +A  AI  +
Sbjct:   146 IFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEM 205

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG  L +R ++ ++ T KG TS
Sbjct:   206 NGKWLSSRQIRCNWAT-KGATS 226

 Score = 98 (39.6 bits), Expect = 0.00027, P = 0.00027
 Identities = 31/86 (36%), Positives = 44/86 (51%)

Query:    25 PANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 84
             P N  N     ++V NLAPE  +  L + F   GA     VI +++  + KGFGFV    
Sbjct:   258 PEN--NSQFTTVYVGNLAPEVTQLDLHRYFHALGA----GVIEEVRVQRDKGFGFVRYNT 311

Query:    85 YDEAVVAIQSLNGYA-LGNRILQVSF 109
             + EA +AIQ  N    L NR ++ S+
Sbjct:   312 HPEAALAIQMGNTQPYLFNRQIKCSW 337


>UNIPROTKB|O93235 [details] [associations]
            symbol:cirbp-a "Cold-inducible RNA-binding protein A"
            species:8355 "Xenopus laevis" [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=IMP] [GO:0009409
            "response to cold" evidence=IEP] [GO:0009411 "response to UV"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISS] [GO:0016477
            "cell migration" evidence=IMP] [GO:0017148 "negative regulation of
            translation" evidence=ISS] [GO:0019899 "enzyme binding"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IMP] [GO:0030371
            "translation repressor activity" evidence=ISS] [GO:0034063 "stress
            granule assembly" evidence=ISS] [GO:0045727 "positive regulation of
            translation" evidence=ISS] [GO:0048255 "mRNA stabilization"
            evidence=ISS] [GO:0048793 "pronephros development"
            evidence=IEP;IMP] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0070181 "SSU rRNA binding" evidence=ISS] [GO:0072004 "kidney
            field specification" evidence=IMP] [GO:0005840 "ribosome"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0009411
            GO:GO:0005654 GO:GO:0016477 GO:GO:0022008 GO:GO:0000166
            GO:GO:0030371 GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0019899
            GO:GO:0048255 GO:GO:0003730 GO:GO:0045727 GO:GO:0007369
            GO:GO:0010494 GO:GO:0034063 GO:GO:0048793 EMBL:AB007597
            EMBL:AF278702 EMBL:BC041204 RefSeq:NP_001080069.1 UniGene:Xl.4515
            ProteinModelPortal:O93235 SMR:O93235 GeneID:379761 KEGG:xla:379761
            CTD:379761 Xenbase:XB-GENE-6256647 HOVERGEN:HBG107480 GO:GO:0070181
            GO:GO:0072004 GO:GO:0060212 Uniprot:O93235
        Length = 166

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L  ET E  L Q F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    67 NGKSVDGRQIRVD---QAGKSS 85


>ZFIN|ZDB-GENE-050417-329 [details] [associations]
            symbol:zgc:112425 "zgc:112425" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-050417-329 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 eggNOG:COG0724 HOVERGEN:HBG107480 KO:K13195
            HOGENOM:HOG000276232 OrthoDB:EOG4HHP40 GeneTree:ENSGT00700000104309
            OMA:GNNSGGY EMBL:CABZ01088879 EMBL:CABZ01088880 EMBL:BC093299
            EMBL:BC095030 IPI:IPI00570286 RefSeq:NP_001017797.1
            UniGene:Dr.75965 SMR:Q566W6 STRING:Q566W6
            Ensembl:ENSDART00000093068 Ensembl:ENSDART00000113350 GeneID:550495
            KEGG:dre:550495 NextBio:20879737 Uniprot:Q566W6
        Length = 185

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 28/79 (35%), Positives = 48/79 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L+ +T E  L   F  +G + +V V R+ +TN+ +GFGFVT  N D+A  A++ +
Sbjct:     7 LFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEGM 66

Query:    96 NGYALGNRILQVSFKTNKG 114
             NG ++  R ++V  +  KG
Sbjct:    67 NGKSVDGRTIRVD-EAGKG 84


>WB|WBGene00012904 [details] [associations]
            symbol:tiar-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HSSP:P11940 EMBL:AL110485 GeneTree:ENSGT00680000099967
            HOGENOM:HOG000206748 KO:K13201 RefSeq:NP_496718.1 UniGene:Cel.14057
            ProteinModelPortal:Q9U2F5 SMR:Q9U2F5 IntAct:Q9U2F5 PaxDb:Q9U2F5
            EnsemblMetazoa:Y46G5A.13 GeneID:174909 KEGG:cel:CELE_Y46G5A.13
            UCSC:Y46G5A.13 CTD:174909 WormBase:Y46G5A.13 InParanoid:Q9U2F5
            NextBio:886000 Uniprot:Q9U2F5
        Length = 434

 Score = 146 (56.5 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 31/78 (39%), Positives = 46/78 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L  E + + L + F  FG V   K+IRD  TNK KG+GFV+    ++A  AI  +
Sbjct:   134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  LG R ++ ++ T K
Sbjct:   194 NGAWLGRRTIRTNWATRK 211


>UNIPROTKB|D6W5Y5 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CH471139 EMBL:AC004221 EMBL:AC004258 IPI:IPI00641579
            UniGene:Hs.618145 UniGene:Hs.634522 HGNC:HGNC:1982
            HOGENOM:HOG000276232 ChiTaRS:CIRBP ProteinModelPortal:D6W5Y5
            PRIDE:D6W5Y5 Ensembl:ENST00000587323 Ensembl:ENST00000587896
            Ensembl:ENST00000588230 Ensembl:ENST00000589710 ArrayExpress:D6W5Y5
            Bgee:D6W5Y5 Uniprot:D6W5Y5
        Length = 297

 Score = 142 (55.0 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 30/82 (36%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|B4E2X2 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AC004221 HOVERGEN:HBG107480 EMBL:AC004258 UniGene:Hs.618145
            UniGene:Hs.634522 HGNC:HGNC:1982 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 ChiTaRS:CIRBP EMBL:AK304470 IPI:IPI00909097
            SMR:B4E2X2 STRING:B4E2X2 Ensembl:ENST00000413636 UCSC:uc010xgl.1
            Uniprot:B4E2X2
        Length = 263

 Score = 140 (54.3 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 27/72 (37%), Positives = 46/72 (63%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQV 107
             NG ++  R ++V
Sbjct:    68 NGKSVDGRQIRV 79


>FB|FBgn0262475 [details] [associations]
            symbol:bru-2 "bruno-2" species:7227 "Drosophila melanogaster"
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0017148 "negative regulation of translation"
            evidence=ISA] [GO:0003723 "RNA binding" evidence=ISA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 EMBL:AE014134 GO:GO:0017148 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GeneTree:ENSGT00560000076837
            RefSeq:NP_001036356.1 UniGene:Dm.412 ProteinModelPortal:Q0E8R3
            SMR:Q0E8R3 PRIDE:Q0E8R3 EnsemblMetazoa:FBtr0304856
            EnsemblMetazoa:FBtr0332233 GeneID:250811 KEGG:dme:Dmel_CG43065
            UCSC:CG31761-RE CTD:250811 FlyBase:FBgn0262475 OMA:AHVANGN
            PhylomeDB:Q0E8R3 GenomeRNAi:250811 NextBio:843510 Bgee:Q0E8R3
            Uniprot:Q0E8R3
        Length = 893

 Score = 149 (57.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 39/104 (37%), Positives = 59/104 (56%)

Query:    13 PLTGDLL--ASSILPANTMNG-SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDL 69
             P+T   L  A++ +    + G  G  +F+Y+L  E  ++ L   F PFG V S KV  D 
Sbjct:   784 PVTTSALQAAAAGVTGKQIEGPDGSNLFIYHLPQEFIDTDLASTFLPFGNVLSAKVFIDK 843

Query:    70 QTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
             QTN  K FGFV+  N   A  AIQ+++G+ +G++ L+V  K +K
Sbjct:   844 QTNLSKCFGFVSYDNPHSANAAIQAMHGFQIGSKRLKVQLKRSK 887


>FB|FBgn0015818 [details] [associations]
            symbol:Spx "Spliceosomal protein on the X" species:7227
            "Drosophila melanogaster" [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC;ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS;NAS] [GO:0003729 "mRNA binding" evidence=ISS]
            [GO:0005686 "U2 snRNP" evidence=ISS] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0007052 "mitotic spindle organization"
            evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            [GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0007052 GO:GO:0022008 GO:GO:0000166 GO:GO:0003729
            Gene3D:3.30.70.330 GO:GO:0071011 GO:GO:0000398 GO:GO:0005686
            eggNOG:COG0724 HSSP:P11940 EMBL:X97197 ProteinModelPortal:Q24534
            SMR:Q24534 IntAct:Q24534 STRING:Q24534 PRIDE:Q24534
            FlyBase:FBgn0015818 InParanoid:Q24534 OrthoDB:EOG41894B
            ArrayExpress:Q24534 Bgee:Q24534 Uniprot:Q24534
        Length = 366

 Score = 143 (55.4 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 30/84 (35%), Positives = 51/84 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAV-QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             IF+ NL  E +E +L+  F  FG + Q+ K++RD +T K K F F+   +++ +  A+ +
Sbjct:   121 IFIGNLDVEVDEKLLYDTFSAFGVILQTPKIMRDPETGKSKSFAFINFASFEASDAAMDA 180

Query:    95 LNGYALGNRILQVSF---KTNKGK 115
             +NG  L NR + VS+   K +KG+
Sbjct:   181 MNGQYLCNRPISVSYAFKKDHKGE 204


>UNIPROTKB|H9KZV5 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003730
            "mRNA 3'-UTR binding" evidence=IEA] [GO:0009411 "response to UV"
            evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0030371 "translation repressor activity"
            evidence=IEA] [GO:0034063 "stress granule assembly" evidence=IEA]
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0048255 "mRNA stabilization" evidence=IEA] [GO:0070181 "SSU
            rRNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 OMA:ENRSRGY
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000019966 Uniprot:H9KZV5
        Length = 190

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + V  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|H9L0U4 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000029134 Uniprot:H9L0U4
        Length = 167

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + V  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|H9L3B3 [details] [associations]
            symbol:CIRBP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 EMBL:AADN02030141 EMBL:AADN02030142
            Ensembl:ENSGALT00000036191 Uniprot:H9L3B3
        Length = 172

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             + V  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LLVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>UNIPROTKB|Q9PTX2 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8400 "Rana catesbeiana" [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS] [GO:0009409
            "response to cold" evidence=ISS] [GO:0009790 "embryo development"
            evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
            [GO:0019899 "enzyme binding" evidence=ISS] [GO:0022008
            "neurogenesis" evidence=ISS] [GO:0042750 "hibernation"
            evidence=IEP] [GO:0045727 "positive regulation of translation"
            evidence=ISS] [GO:0048255 "mRNA stabilization" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0060212
            "negative regulation of nuclear-transcribed mRNA poly(A) tail
            shortening" evidence=ISS] [GO:0005840 "ribosome" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0005654
            GO:GO:0016477 GO:GO:0022008 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0019899 GO:GO:0048255 GO:GO:0003730
            GO:GO:0045727 GO:GO:0007369 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 HSSP:P09651 EMBL:AB025351 ProteinModelPortal:Q9PTX2
            SMR:Q9PTX2 GO:GO:0042750 Uniprot:Q9PTX2
        Length = 164

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T+E  L  +F  +G +Q V V++D +T + +GFGFVT  N ++A  A+  +
Sbjct:     8 LFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAGM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG  +  R ++V      GK+S
Sbjct:    68 NGKTVDGRQIRVD---QAGKSS 86


>FB|FBgn0031883 [details] [associations]
            symbol:CG11266 species:7227 "Drosophila melanogaster"
            [GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA
            splicing" evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
            splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 EMBL:AE014134
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0071011
            GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 HSSP:Q60900
            TIGRFAMs:TIGR01622 KO:K13091 OMA:AGWDTEI
            GeneTree:ENSGT00690000102089 UniGene:Dm.7322 GeneID:33989
            KEGG:dme:Dmel_CG11266 FlyBase:FBgn0031883 ChiTaRS:CG11266
            GenomeRNAi:33989 NextBio:786302 EMBL:AY051860 RefSeq:NP_609095.1
            RefSeq:NP_723243.1 SMR:Q9VM49 IntAct:Q9VM49 MINT:MINT-745605
            STRING:Q9VM49 EnsemblMetazoa:FBtr0089636 EnsemblMetazoa:FBtr0089640
            UCSC:CG11266-RA InParanoid:Q9VM49 Uniprot:Q9VM49
        Length = 594

 Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
 Identities = 27/78 (34%), Positives = 49/78 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG + ++++I D +T + KG+GF+T  N D+A  A++ L
Sbjct:   337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQL 396

Query:    96 NGYALGNRILQVSFKTNK 113
             NG+ L  R+++V   T +
Sbjct:   397 NGFELAGRLMKVGNVTER 414


>WB|WBGene00007396 [details] [associations]
            symbol:tiar-3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0019722
            "calcium-mediated signaling" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009792 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            eggNOG:COG0724 GeneTree:ENSGT00680000099967 EMBL:Z78536
            RefSeq:NP_509705.3 ProteinModelPortal:Q93194 SMR:Q93194
            EnsemblMetazoa:C07A4.1 GeneID:182350 KEGG:cel:CELE_C07A4.1
            UCSC:C07A4.1 CTD:182350 WormBase:C07A4.1 OMA:ASEPPME Uniprot:Q93194
        Length = 450

 Score = 144 (55.7 bits), Expect = 3.1e-09, P = 3.1e-09
 Identities = 30/78 (38%), Positives = 44/78 (56%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+ +    +L   F  FG V   KVIRD+QT K KG+GFV+  N   A  AI  +
Sbjct:   227 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 286

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  +G R ++ ++   K
Sbjct:   287 NGKWIGKRAVRTNWAARK 304


>TAIR|locus:2019622 [details] [associations]
            symbol:GR-RBP5 "AT1G74230" species:3702 "Arabidopsis
            thaliana" [GO:0003723 "RNA binding" evidence=ISS;IDA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005524
            "ATP binding" evidence=IDA] [GO:0005507 "copper ion binding"
            evidence=IDA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524
            Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005507 eggNOG:COG0724
            EMBL:AC020579 HSSP:Q14103 KO:K12741 EMBL:BT002037 EMBL:BT006315
            IPI:IPI00516639 PIR:F96770 RefSeq:NP_177563.1 UniGene:At.18152
            ProteinModelPortal:Q9C909 SMR:Q9C909 PaxDb:Q9C909 PRIDE:Q9C909
            EnsemblPlants:AT1G74230.1 GeneID:843763 KEGG:ath:AT1G74230
            GeneFarm:3954 TAIR:At1g74230 InParanoid:Q9C909 OMA:TERGSGF
            ProtClustDB:CLSN2914559 Genevestigator:Q9C909 Uniprot:Q9C909
        Length = 289

 Score = 140 (54.3 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 38/114 (33%), Positives = 63/114 (55%)

Query:     1 MLAINKGLQRFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAV 60
             M  ++K  + FS  +  + ASS +  +    S   IFV  ++  T+E  L + F  +G V
Sbjct:     1 MAFLSKVGRLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60

Query:    61 QSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKG 114
                K+I D +T + +GF FVT T+ +EA  A+Q L+G  L  R ++V++ T +G
Sbjct:    61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERG 113


>ZFIN|ZDB-GENE-030131-5841 [details] [associations]
            symbol:cirbp "cold inducible RNA binding protein"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0009409 "response
            to cold" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-030131-5841 GO:GO:0000166 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104309
            EMBL:BX649404 IPI:IPI00758644 PRIDE:F1R6L3
            Ensembl:ENSDART00000105405 ArrayExpress:F1R6L3 Bgee:F1R6L3
            Uniprot:F1R6L3
        Length = 224

 Score = 136 (52.9 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 28/82 (34%), Positives = 48/82 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L+ +T E  L + F  +G +  V VIRD +T++ +GFGFVT  N ++A  A+ ++
Sbjct:    25 LFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAM 84

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG  +  R+++V      G  S
Sbjct:    85 NGKQVDGRMIRVDEAGKSGGRS 106


>UNIPROTKB|G4NFS0 [details] [associations]
            symbol:MGG_08741 "tRNA selenocysteine-associated protein 1"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:CM001236 RefSeq:XP_003719244.1
            EnsemblFungi:MGG_08741T0 GeneID:2679034 KEGG:mgr:MGG_08741
            Uniprot:G4NFS0
        Length = 415

 Score = 130 (50.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
 Identities = 30/87 (34%), Positives = 48/87 (55%)

Query:    31 GSGWCIFVYNLAPETEESVLWQLF-GPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             G  + IFV +L PE  E VL  LF   F + +S K++ D  T + +G+GFV  T+  +  
Sbjct:   137 GPEYSIFVGDLGPEVNEFVLVSLFQARFPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQ 196

Query:    90 VAIQSLNGYALGNRILQVSFKTNKGKT 116
              A+  + G   GNR +++S  T K ++
Sbjct:   197 RALVEMQGVYCGNRPMRISTATPKTRS 223

 Score = 33 (16.7 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query:    27 NTMNGSG 33
             N MNGSG
Sbjct:    20 NAMNGSG 26


>UNIPROTKB|I3L5X7 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:FP325173 RefSeq:NP_001230348.1 UniGene:Ssc.3311
            Ensembl:ENSSSCT00000030983 GeneID:100627807 KEGG:ssc:100627807
            Uniprot:I3L5X7
        Length = 156

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A  A++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>MGI|MGI:1099460 [details] [associations]
            symbol:Rbm3 "RNA binding motif protein 3" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006412 "translation"
            evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
            [GO:0006950 "response to stress" evidence=IEA] [GO:0009409
            "response to cold" evidence=IDA] [GO:0015934 "large ribosomal
            subunit" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
            [GO:0043023 "ribosomal large subunit binding" evidence=IPI]
            [GO:0045727 "positive regulation of translation" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 MGI:MGI:1099460 GO:GO:0005634 GO:GO:0005737
            GO:GO:0000166 GO:GO:0006412 GO:GO:0030425 GO:GO:0009409
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727 eggNOG:COG0724
            HOVERGEN:HBG107480 HOGENOM:HOG000276232 OrthoDB:EOG4HHP40
            GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186 EMBL:AB016424
            EMBL:AY052560 EMBL:BC006580 IPI:IPI00130883 RefSeq:NP_001159882.1
            RefSeq:NP_001159883.1 UniGene:Mm.128512 UniGene:Mm.360569
            ProteinModelPortal:O89086 SMR:O89086 IntAct:O89086 STRING:O89086
            PhosphoSite:O89086 REPRODUCTION-2DPAGE:IPI00130883 PaxDb:O89086
            PRIDE:O89086 Ensembl:ENSMUST00000115615 Ensembl:ENSMUST00000115619
            Ensembl:ENSMUST00000115621 GeneID:19652 KEGG:mmu:19652
            NextBio:296916 Bgee:O89086 CleanEx:MM_RBM3 Genevestigator:O89086
            GermOnline:ENSMUSG00000031167 Uniprot:O89086
        Length = 153

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A  A++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>UNIPROTKB|G3V6P6 [details] [associations]
            symbol:Rbm3 "Putative RNA-binding protein 3" species:10116
            "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IEA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=IEA] [GO:0043023 "ribosomal large
            subunit binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:620145 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            RefSeq:NP_446148.1 UniGene:Rn.18057 GeneID:114488 KEGG:rno:114488
            NextBio:618509 EMBL:CH474078 Ensembl:ENSRNOT00000007367
            Uniprot:G3V6P6
        Length = 156

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A  A++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>TAIR|locus:2049721 [details] [associations]
            symbol:AT2G37220 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009579 "thylakoid"
            evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
            [GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009409
            "response to cold" evidence=IEP;RCA] [GO:0010319 "stromule"
            evidence=IDA] [GO:0045087 "innate immune response" evidence=IDA]
            [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0009737
            "response to abscisic acid stimulus" evidence=IEP] [GO:0009534
            "chloroplast thylakoid" evidence=IDA] [GO:0009697 "salicylic acid
            biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
            incompatible interaction" evidence=RCA] [GO:0019684
            "photosynthesis, light reaction" evidence=RCA] [GO:0042742 "defense
            response to bacterium" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009737 GO:GO:0009570 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0008266 GO:GO:0000166 GO:GO:0009409 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0045087 GO:GO:0009941 EMBL:AC005896
            GO:GO:0030529 GO:GO:0009535 GO:GO:0010319 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AC006260 KO:K11294 EMBL:AF370167
            EMBL:AY048251 EMBL:AY059129 IPI:IPI00540246 PIR:A84790
            RefSeq:NP_181259.1 UniGene:At.25300 ProteinModelPortal:Q9ZUU4
            SMR:Q9ZUU4 IntAct:Q9ZUU4 STRING:Q9ZUU4 SWISS-2DPAGE:Q9ZUU4
            PaxDb:Q9ZUU4 PRIDE:Q9ZUU4 ProMEX:Q9ZUU4 EnsemblPlants:AT2G37220.1
            GeneID:818299 KEGG:ath:AT2G37220 GeneFarm:4058 TAIR:At2g37220
            InParanoid:Q9ZUU4 OMA:PFNVDSA PhylomeDB:Q9ZUU4
            ProtClustDB:CLSN2684922 Genevestigator:Q9ZUU4 GermOnline:AT2G37220
            Uniprot:Q9ZUU4
        Length = 289

 Score = 138 (53.6 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 32/73 (43%), Positives = 43/73 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV NL    + + L QLF   G V+ V+VI D  T + +GFGFVTM++  E   A Q  
Sbjct:    93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152

Query:    96 NGYALGNRILQVS 108
             NGY L  R L+V+
Sbjct:   153 NGYELDGRPLRVN 165

 Score = 123 (48.4 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%)

Query:    31 GSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVV 90
             GSG  ++V NL+   ++  L  LF   G V   +VI D  + + KGFGFVT  +  E   
Sbjct:   201 GSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260

Query:    91 AIQSLNGYALGNRILQVS 108
             AI+SL+G  L  R ++VS
Sbjct:   261 AIKSLDGADLDGRQIRVS 278


>UNIPROTKB|F6RBQ9 [details] [associations]
            symbol:F6RBQ9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043023 "ribosomal large subunit binding" evidence=IEA]
            [GO:0035196 "production of miRNAs involved in gene silencing by
            miRNA" evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 GO:GO:0006412
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 GO:GO:0035196 GO:GO:0043023
            OMA:SDAMRAM EMBL:DAAA02073061 IPI:IPI00691523
            Ensembl:ENSBTAT00000024034 Uniprot:F6RBQ9
        Length = 160

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A  A++++
Sbjct:     8 LFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>UNIPROTKB|D4A964 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            RGD:1595845 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            IPI:IPI00949247 Ensembl:ENSRNOT00000066938 Uniprot:D4A964
        Length = 368

 Score = 139 (54.0 bits), Expect = 7.4e-09, P = 7.4e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>UNIPROTKB|F1LQ36 [details] [associations]
            symbol:Tial1 "Protein Tial1" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1595845 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            GO:GO:0017145 GeneTree:ENSGT00680000099967 IPI:IPI00555194
            Ensembl:ENSRNOT00000027463 Uniprot:F1LQ36
        Length = 371

 Score = 139 (54.0 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>UNIPROTKB|K7ELT6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000590347 Ensembl:ENST00000591055
            Uniprot:K7ELT6
        Length = 135

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 25/62 (40%), Positives = 40/62 (64%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NG 97
             NG
Sbjct:    68 NG 69


>UNIPROTKB|K7ELV6 [details] [associations]
            symbol:CIRBP "Cold-inducible RNA-binding protein"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 Gene3D:3.30.70.330 EMBL:AC004221 EMBL:AC004258
            HGNC:HGNC:1982 Ensembl:ENST00000588344 Uniprot:K7ELV6
        Length = 70

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 25/62 (40%), Positives = 40/62 (64%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+ +T E  L Q+F  +G +  V V++D +T + +GFGFVT  N D+A  A+ ++
Sbjct:     8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67

Query:    96 NG 97
             NG
Sbjct:    68 NG 69


>TAIR|locus:2119505 [details] [associations]
            symbol:AT4G13860 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 HSSP:P19339 HOGENOM:HOG000276232
            UniGene:At.33330 EMBL:BT014844 IPI:IPI00523584 RefSeq:NP_193122.2
            ProteinModelPortal:Q6ID29 SMR:Q6ID29 PRIDE:Q6ID29
            EnsemblPlants:AT4G13860.1 GeneID:827020 KEGG:ath:AT4G13860
            TAIR:At4g13860 InParanoid:Q6ID29 OMA:KIEEMFL PhylomeDB:Q6ID29
            Genevestigator:Q6ID29 Uniprot:Q6ID29
        Length = 87

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 26/72 (36%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V NL+P T + +L + F  +G V    V+RD  T++ +GFGFVT +++ EA  A+  +
Sbjct:     5 VYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSGM 64

Query:    96 NGYALGNRILQV 107
             +G  L  R + V
Sbjct:    65 DGKELNGRRVSV 76


>UNIPROTKB|Q01085 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006915
            "apoptotic process" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=ISS] [GO:0003723 "RNA binding" evidence=TAS] [GO:0006952
            "defense response" evidence=TAS] [GO:0005764 "lysosome"
            evidence=TAS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006917 "induction of
            apoptosis" evidence=TAS] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0006915 GO:GO:0006952 GO:GO:0006917 GO:GO:0000166
            GO:GO:0008284 Gene3D:3.30.70.330 GO:GO:0006357 GO:GO:0005764
            GO:GO:0003723 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 EMBL:M96954 EMBL:AK290695
            EMBL:AK290984 IPI:IPI00005615 IPI:IPI00644708 PIR:A46174
            RefSeq:NP_001029097.1 RefSeq:NP_003243.1 UniGene:Hs.501203 PDB:1X4G
            PDB:2CQI PDB:2DH7 PDBsum:1X4G PDBsum:2CQI PDBsum:2DH7
            ProteinModelPortal:Q01085 SMR:Q01085 DIP:DIP-42425N IntAct:Q01085
            MINT:MINT-1203913 STRING:Q01085 PhosphoSite:Q01085 DMDM:267131
            PaxDb:Q01085 PRIDE:Q01085 Ensembl:ENST00000369093
            Ensembl:ENST00000436547 GeneID:7073 KEGG:hsa:7073 UCSC:uc001lei.1
            CTD:7073 GeneCards:GC10M121324 HGNC:HGNC:11804 MIM:603413
            neXtProt:NX_Q01085 PharmGKB:PA36513 OMA:EEVYNQS PhylomeDB:Q01085
            ChiTaRS:TIAL1 EvolutionaryTrace:Q01085 GenomeRNAi:7073
            NextBio:27661 ArrayExpress:Q01085 Bgee:Q01085 CleanEx:HS_TIAL1
            Genevestigator:Q01085 GermOnline:ENSG00000151923 Uniprot:Q01085
        Length = 375

 Score = 139 (54.0 bits), Expect = 7.7e-09, P = 7.7e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   159 GGQWLGGRQIRTNWATRK 176


>UNIPROTKB|F2Z4H8 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0017145 "stem cell division" evidence=IEA] [GO:0017091
            "AU-rich element binding" evidence=IEA] [GO:0010494 "cytoplasmic
            stress granule" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:NGSKQLR
            EMBL:DAAA02059399 IPI:IPI00707976 RefSeq:NP_001179985.1
            UniGene:Bt.15754 ProteinModelPortal:F2Z4H8
            Ensembl:ENSBTAT00000005331 GeneID:614540 KEGG:bta:614540
            NextBio:20899153 Uniprot:F2Z4H8
        Length = 380

 Score = 139 (54.0 bits), Expect = 7.9e-09, P = 7.9e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:    99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 158

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   159 GGQWLGGRQIRTNWATRK 176


>UNIPROTKB|F1NY49 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00575679 Ensembl:ENSGALT00000015349 ArrayExpress:F1NY49
            Uniprot:F1NY49
        Length = 388

 Score = 139 (54.0 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   175 GGQWLGGRQIRTNWATRK 192


>UNIPROTKB|F1NS94 [details] [associations]
            symbol:374274 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0007281 "germ cell
            development" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010494 "cytoplasmic stress
            granule" evidence=IEA] [GO:0017091 "AU-rich element binding"
            evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 OMA:EEVYNQS EMBL:AADN02030982
            IPI:IPI00681845 Ensembl:ENSGALT00000029737 ArrayExpress:F1NS94
            Uniprot:F1NS94
        Length = 389

 Score = 139 (54.0 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>UNIPROTKB|E2RA41 [details] [associations]
            symbol:TIAL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0017145 "stem cell division" evidence=IEA]
            [GO:0017091 "AU-rich element binding" evidence=IEA] [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0007281 "germ
            cell development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 Gene3D:3.30.70.330
            GO:GO:0017091 GO:GO:0007281 GO:GO:0010494 GO:GO:0017145
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:AAEX03015584 EMBL:AAEX03015585 RefSeq:XP_852319.1
            ProteinModelPortal:E2RA41 SMR:E2RA41 Ensembl:ENSCAFT00000019370
            GeneID:477841 KEGG:cfa:477841 NextBio:20853261 Uniprot:E2RA41
        Length = 392

 Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>UNIPROTKB|F2Z5F9 [details] [associations]
            symbol:LOC100736782 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00680000099967 KO:K13201 CTD:7073 OMA:EEVYNQS
            EMBL:CT826370 EMBL:CT867965 RefSeq:XP_003133244.1 UniGene:Ssc.56271
            ProteinModelPortal:F2Z5F9 SMR:F2Z5F9 Ensembl:ENSSSCT00000011686
            GeneID:100158186 KEGG:ssc:100158186 Uniprot:F2Z5F9
        Length = 392

 Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>MGI|MGI:107913 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0007281 "germ cell development" evidence=IMP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0010494 "cytoplasmic stress granule" evidence=IDA] [GO:0017091
            "AU-rich element binding" evidence=IDA] [GO:0017145 "stem cell
            division" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:107913
            GO:GO:0005634 GO:GO:0006915 GO:GO:0000166 GO:GO:0008284
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 ChiTaRS:TIAL1
            EMBL:U55861 IPI:IPI00108085 PIR:S72436 RefSeq:NP_033409.1
            UniGene:Mm.242072 ProteinModelPortal:P70318 SMR:P70318
            IntAct:P70318 STRING:P70318 PhosphoSite:P70318 PaxDb:P70318
            PRIDE:P70318 Ensembl:ENSMUST00000106226 GeneID:21843 KEGG:mmu:21843
            InParanoid:P70318 OMA:NGSKQLR NextBio:301310 Bgee:P70318
            Genevestigator:P70318 GermOnline:ENSMUSG00000030846 Uniprot:P70318
        Length = 392

 Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>RGD|1595845 [details] [associations]
            symbol:Tial1 "Tia1 cytotoxic granule-associated RNA binding
            protein-like 1" species:10116 "Rattus norvegicus" [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0007281 "germ cell development" evidence=ISO] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISO]
            [GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0017091
            "AU-rich element binding" evidence=ISO] [GO:0017145 "stem cell
            division" evidence=ISO] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1595845
            GO:GO:0005634 GO:GO:0000166 GO:GO:0008284 EMBL:CH473956
            Gene3D:3.30.70.330 GO:GO:0017091 GO:GO:0007281 GO:GO:0010494
            eggNOG:COG0724 GO:GO:0017145 HOGENOM:HOG000206748 KO:K13201
            HOVERGEN:HBG105006 OrthoDB:EOG4B5P59 CTD:7073 IPI:IPI00555194
            EMBL:BC091409 RefSeq:NP_001013211.1 UniGene:Rn.162475 SMR:Q5BJN3
            STRING:Q5BJN3 GeneID:361655 KEGG:rno:361655 UCSC:RGD:1595845
            InParanoid:Q5BJN3 NextBio:677112 Genevestigator:Q5BJN3
            Uniprot:Q5BJN3
        Length = 392

 Score = 139 (54.0 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   116 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 175

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   176 GGQWLGGRQIRTNWATRK 193


>SGD|S000001128 [details] [associations]
            symbol:NAM8 "RNA binding protein, component of the U1 snRNP
            protein" species:4932 "Saccharomyces cerevisiae" [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA;IPI] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0071004 "U2-type prespliceosome" evidence=IDA] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=IPI] [GO:0005685 "U1
            snRNP" evidence=IDA] [GO:0003729 "mRNA binding" evidence=IPI]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000243 "commitment complex"
            evidence=IPI] [GO:0006376 "mRNA splice site selection"
            evidence=IMP] [GO:0048026 "positive regulation of mRNA splicing,
            via spliceosome" evidence=IMP] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            SGD:S000001128 GO:GO:0005739 GO:GO:0000166 EMBL:BK006934
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000243 eggNOG:COG0724
            GO:GO:0048026 GO:GO:0006376 GO:GO:0071004 OrthoDB:EOG44BFB8
            EMBL:U00060 GO:GO:0005685 EMBL:X64763 EMBL:D11461 PIR:S46720
            RefSeq:NP_011954.1 ProteinModelPortal:Q00539 SMR:Q00539
            DIP:DIP-2749N IntAct:Q00539 MINT:MINT-612683 STRING:Q00539
            PaxDb:Q00539 PeptideAtlas:Q00539 EnsemblFungi:YHR086W GeneID:856486
            KEGG:sce:YHR086W CYGD:YHR086w GeneTree:ENSGT00510000047100
            HOGENOM:HOG000066109 OMA:MNTGMNT NextBio:982182
            Genevestigator:Q00539 GermOnline:YHR086W Uniprot:Q00539
        Length = 523

 Score = 141 (54.7 bits), Expect = 8.4e-09, P = 8.4e-09
 Identities = 30/82 (36%), Positives = 45/82 (54%)

Query:    27 NTMNGSGWCIFVYNLAPETEESVLWQLF-GPFGAVQSVKVIRDLQTNKCKGFGFVTMTNY 85
             N  +G+   IFV +LAP   ES L++LF   + +    K++ D  T   KG+GFV  TN 
Sbjct:   156 NVKSGNNCSIFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNS 215

Query:    86 DEAVVAIQSLNGYALGNRILQV 107
             DE  +A+  + G  L  R ++V
Sbjct:   216 DEQQLALSEMQGVFLNGRAIKV 237


>UNIPROTKB|H0YCC8 [details] [associations]
            symbol:PABPC4 "Polyadenylate-binding protein 4"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AL365277 EMBL:AL845289 HGNC:HGNC:8557 ChiTaRS:PABPC4
            Ensembl:ENST00000474378 Uniprot:H0YCC8
        Length = 197

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +++ N   E ++  L +LF  FG   SVKV+RD    K KGFGFV+   +++A  A++ +
Sbjct:   106 VYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEM 164

Query:    96 NGYALGNRILQV 107
             NG  +  +I+ V
Sbjct:   165 NGKEISGKIIFV 176


>UNIPROTKB|Q28IQ9 [details] [associations]
            symbol:cirbp "Cold-inducible RNA-binding protein"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0003729 "mRNA
            binding" evidence=ISS] [GO:0003730 "mRNA 3'-UTR binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0007369 "gastrulation" evidence=ISS]
            [GO:0009409 "response to cold" evidence=ISS] [GO:0009790 "embryo
            development" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0022008 "neurogenesis" evidence=ISS] [GO:0045727 "positive
            regulation of translation" evidence=ISS] [GO:0048255 "mRNA
            stabilization" evidence=ISS] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0060212 "negative regulation of
            nuclear-transcribed mRNA poly(A) tail shortening" evidence=ISS]
            [GO:0005840 "ribosome" evidence=ISS] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0016477
            GO:GO:0022008 GO:GO:0000166 GO:GO:0009409 Gene3D:3.30.70.330
            GO:GO:0019899 GO:GO:0048255 GO:GO:0003730 GO:GO:0045727
            GO:GO:0007369 eggNOG:COG0724 GO:GO:0048793 HOVERGEN:HBG107480
            GO:GO:0060212 KO:K13195 CTD:1153 HOGENOM:HOG000276232 EMBL:CR760272
            RefSeq:NP_001017228.1 UniGene:Str.47654 ProteinModelPortal:Q28IQ9
            SMR:Q28IQ9 STRING:Q28IQ9 GeneID:549982 KEGG:xtr:549982
            Xenbase:XB-GENE-492781 Uniprot:Q28IQ9
        Length = 166

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 30/82 (36%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L  ET E  L Q+F  +G V  V V++D ++ + +GFGFVT  N ++A  A+ ++
Sbjct:     8 LFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAM 67

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG ++  R ++V      GK+S
Sbjct:    68 NGKSVDGRQIRVD---QAGKSS 86


>ZFIN|ZDB-GENE-040426-1547 [details] [associations]
            symbol:tial1 "TIA1 cytotoxic granule-associated
            RNA binding protein-like 1" species:7955 "Danio rerio" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-1547 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 GeneTree:ENSGT00680000099967 EMBL:BX530079
            IPI:IPI00920337 ProteinModelPortal:E9QJJ0
            Ensembl:ENSDART00000135321 ArrayExpress:E9QJJ0 Bgee:E9QJJ0
            Uniprot:E9QJJ0
        Length = 389

 Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:   117 VFVGDLSPEITTDDIRAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHM 176

Query:    96 NGYALGNRILQVSFKTNK 113
              G  LG R ++ ++ T K
Sbjct:   177 GGQWLGGRQIRTNWATRK 194


>TAIR|locus:2079874 [details] [associations]
            symbol:CP33 "chloroplast RNA-binding protein 33"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0009579
            "thylakoid" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0010027
            "thylakoid membrane organization" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
            evidence=RCA] [GO:0019288 "isopentenyl diphosphate biosynthetic
            process, mevalonate-independent pathway" evidence=RCA] [GO:0048481
            "ovule development" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0009579 HSSP:P19339
            eggNOG:COG0724 HOGENOM:HOG000276232 EMBL:AL050300 UniGene:At.65006
            UniGene:At.71002 EMBL:AY039607 EMBL:AY078022 EMBL:AY085279
            EMBL:D31714 IPI:IPI00543679 PIR:S53494 RefSeq:NP_190806.1
            ProteinModelPortal:Q39061 SMR:Q39061 STRING:Q39061 PaxDb:Q39061
            PRIDE:Q39061 EnsemblPlants:AT3G52380.1 GeneID:824403
            KEGG:ath:AT3G52380 TAIR:At3g52380 InParanoid:Q39061 OMA:FISFESA
            PhylomeDB:Q39061 ProtClustDB:CLSN2684767 Genevestigator:Q39061
            Uniprot:Q39061
        Length = 329

 Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V NL      S L Q+FG  G V  V+++ D  T++ +GFGFVTM + +EA  A+Q  
Sbjct:   118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 177

Query:    96 NGYALGNRILQVSF 109
             N   +G R ++V+F
Sbjct:   178 NSSQIGGRTVKVNF 191


>UNIPROTKB|G3V5Z6 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132780
            EMBL:AL135998 HGNC:HGNC:20155 ChiTaRS:RBM23
            ProteinModelPortal:G3V5Z6 SMR:G3V5Z6 Ensembl:ENST00000555209
            ArrayExpress:G3V5Z6 Bgee:G3V5Z6 Uniprot:G3V5Z6
        Length = 189

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 26/84 (30%), Positives = 49/84 (58%)

Query:    30 NGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             NG    ++V +L     E +L  +F PFG + ++ +++D  T + KG+GF+T ++ + A 
Sbjct:     9 NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 68

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              A++ LNG+ L  R ++V   T +
Sbjct:    69 RALEQLNGFELAGRPMRVGHVTER 92


>RGD|620145 [details] [associations]
            symbol:Rbm3 "RNA binding motif (RNP1, RRM) protein 3"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0006417 "regulation of translation"
            evidence=ISO;ISS] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0009409 "response to cold" evidence=ISO] [GO:0015934 "large
            ribosomal subunit" evidence=IDA] [GO:0030425 "dendrite"
            evidence=IDA] [GO:0035196 "production of miRNAs involved in gene
            silencing by miRNA" evidence=ISO] [GO:0043023 "ribosomal large
            subunit binding" evidence=ISO] [GO:0045727 "positive regulation of
            translation" evidence=IDA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:620145 GO:GO:0005634
            GO:GO:0005737 GO:GO:0000166 GO:GO:0006412 GO:GO:0030425
            GO:GO:0009409 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0045727
            eggNOG:COG0724 HOVERGEN:HBG107480 HSSP:P09651 HOGENOM:HOG000276232
            OrthoDB:EOG4HHP40 GO:GO:0035196 GO:GO:0043023 CTD:5935 KO:K13186
            EMBL:FM093406 EMBL:AF355190 IPI:IPI00367437 IPI:IPI00955177
            RefSeq:NP_446148.1 UniGene:Rn.18057 ProteinModelPortal:Q925G0
            MINT:MINT-4611770 STRING:Q925G0 PRIDE:Q925G0 GeneID:114488
            KEGG:rno:114488 UCSC:RGD:620145 InParanoid:Q925G0 NextBio:618509
            Genevestigator:Q925G0 Uniprot:Q925G0
        Length = 155

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 26/72 (36%), Positives = 43/72 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T TN + A   ++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>FB|FBgn0027841 [details] [associations]
            symbol:CstF-64 "Cleavage stimulation factor 64 kilodalton
            subunit" species:7227 "Drosophila melanogaster" [GO:0006379 "mRNA
            cleavage" evidence=ISS;NAS] [GO:0005848 "mRNA cleavage stimulating
            factor complex" evidence=ISS;NAS] [GO:0003729 "mRNA binding"
            evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0022008
            "neurogenesis" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0022008
            GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0006379
            InterPro:IPR025742 InterPro:IPR026896 Pfam:PF14327 Pfam:PF14304
            HSSP:P33240 GO:GO:0005848 EMBL:BT004860 ProteinModelPortal:Q86NL1
            SMR:Q86NL1 STRING:Q86NL1 PRIDE:Q86NL1 FlyBase:FBgn0027841
            InParanoid:Q86NL1 OrthoDB:EOG4FBG8R ChiTaRS:CstF-64
            ArrayExpress:Q86NL1 Bgee:Q86NL1 Uniprot:Q86NL1
        Length = 437

 Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 31/89 (34%), Positives = 51/89 (57%)

Query:    19 LASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFG 78
             +A      + M+ S   +FV N+  E  E  L ++F   G V S+K++ D ++ K KGFG
Sbjct:     1 MADKAQEQSIMDKSMRSVFVGNIPYEATEEKLKEIFSEVGPVLSLKLVFDRESGKPKGFG 60

Query:    79 FVTMTNYDEAVVAIQSLNGYALGNRILQV 107
             F    + + A+ A+++LNGY +G R L+V
Sbjct:    61 FCEYKDQETALSAMRNLNGYEIGGRTLRV 89


>UNIPROTKB|H0YJJ3 [details] [associations]
            symbol:RBM23 "Probable RNA-binding protein 23" species:9606
            "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132780
            EMBL:AL135998 HGNC:HGNC:20155 ChiTaRS:RBM23 Ensembl:ENST00000553884
            Uniprot:H0YJJ3
        Length = 214

 Score = 130 (50.8 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 26/84 (30%), Positives = 49/84 (58%)

Query:    30 NGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             NG    ++V +L     E +L  +F PFG + ++ +++D  T + KG+GF+T ++ + A 
Sbjct:    34 NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 93

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              A++ LNG+ L  R ++V   T +
Sbjct:    94 RALEQLNGFELAGRPMRVGHVTER 117


>UNIPROTKB|E7ETJ9 [details] [associations]
            symbol:TIAL1 "Nucleolysin TIAR" species:9606 "Homo sapiens"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC012468 HGNC:HGNC:11804
            ChiTaRS:TIAL1 IPI:IPI00647436 ProteinModelPortal:E7ETJ9 SMR:E7ETJ9
            Ensembl:ENST00000412524 ArrayExpress:E7ETJ9 Bgee:E7ETJ9
            Uniprot:E7ETJ9
        Length = 132

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 26/73 (35%), Positives = 42/73 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV +L+PE     +   F PFG +   +V++D+ T K KG+GFV+  N  +A  AI  +
Sbjct:    60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 119

Query:    96 NGYALGNRILQVS 108
              G  LG R ++ +
Sbjct:   120 GGQWLGGRQIRTN 132


>UNIPROTKB|F1SAI1 [details] [associations]
            symbol:CELF4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090394 "negative regulation of excitatory postsynaptic
            membrane potential" evidence=IEA] [GO:0048026 "positive regulation
            of mRNA splicing, via spliceosome" evidence=IEA] [GO:0006376 "mRNA
            splice site selection" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000381
            "regulation of alternative mRNA splicing, via spliceosome"
            evidence=IEA] [GO:0000380 "alternative mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
            GO:GO:0003729 Gene3D:3.30.70.330 GO:GO:0000380 GO:GO:0048026
            GO:GO:0006376 GeneTree:ENSGT00560000076837 GO:GO:0000381
            OMA:SAMESIN EMBL:CU442705 EMBL:FP102263 Ensembl:ENSSSCT00000004150
            Uniprot:F1SAI1
        Length = 371

 Score = 136 (52.9 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 34/92 (36%), Positives = 51/92 (55%)

Query:    23 ILPANTMNGSGWC-IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             ++P     G   C +F+ +L  E  ++ L Q+F PFG   S K   D +TN+ K FGFV+
Sbjct:   275 MIPQQQREGPEGCNLFICHLPQEFGDAELMQMFLPFGNGISSKAFVD-RTNQSKCFGFVS 333

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQVSFKTNK 113
               N   A  AIQ++NG+ +G + L+V  K  K
Sbjct:   334 FDNPASAQTAIQAMNGFQIGMKRLKVQLKRPK 365


>GENEDB_PFALCIPARUM|PFL1745c [details] [associations]
            symbol:PFL1745c "clustered-asparagine-rich
            protein" species:5833 "Plasmodium falciparum" [GO:0003723 "RNA
            binding" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR001202 InterPro:IPR012677
            Pfam:PF00076 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
            PROSITE:PS50102 SMART:SM00360 SMART:SM00456 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AE014188 Gene3D:2.20.70.10
            SUPFAM:SSF51045 RefSeq:XP_001350755.2 ProteinModelPortal:Q8I562
            IntAct:Q8I562 MINT:MINT-1548460 PRIDE:Q8I562
            EnsemblProtists:PFL1745c:mRNA GeneID:811401 KEGG:pfa:PFL1745c
            EuPathDB:PlasmoDB:PF3D7_1236100 HOGENOM:HOG000283459 Uniprot:Q8I562
        Length = 445

 Score = 137 (53.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 36/88 (40%), Positives = 52/88 (59%)

Query:    30 NG-SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEA 88
             NG SG  +F++++  E  +  L+Q F  FG + S K+ RD  T +  GFGFV+  N   A
Sbjct:   355 NGPSGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVISA 413

Query:    89 VVAIQSLNGYALGNRILQVSFKTNKGKT 116
               AIQ +NGY + N+ L+V  K  KG+T
Sbjct:   414 QHAIQFMNGYFVNNKYLKVQLK--KGET 439


>UNIPROTKB|Q8I562 [details] [associations]
            symbol:PFL1745c "Clustered-asparagine-rich protein"
            species:36329 "Plasmodium falciparum 3D7" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR001202 InterPro:IPR012677 Pfam:PF00076 Pfam:PF00397
            PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50102 SMART:SM00360
            SMART:SM00456 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AE014188 Gene3D:2.20.70.10 SUPFAM:SSF51045
            RefSeq:XP_001350755.2 ProteinModelPortal:Q8I562 IntAct:Q8I562
            MINT:MINT-1548460 PRIDE:Q8I562 EnsemblProtists:PFL1745c:mRNA
            GeneID:811401 KEGG:pfa:PFL1745c EuPathDB:PlasmoDB:PF3D7_1236100
            HOGENOM:HOG000283459 Uniprot:Q8I562
        Length = 445

 Score = 137 (53.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 36/88 (40%), Positives = 52/88 (59%)

Query:    30 NG-SGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEA 88
             NG SG  +F++++  E  +  L+Q F  FG + S K+ RD  T +  GFGFV+  N   A
Sbjct:   355 NGPSGSNLFIFHIPSEWTDLDLFQHFCCFGNIISSKIQRD-STGRNSGFGFVSYDNVISA 413

Query:    89 VVAIQSLNGYALGNRILQVSFKTNKGKT 116
               AIQ +NGY + N+ L+V  K  KG+T
Sbjct:   414 QHAIQFMNGYFVNNKYLKVQLK--KGET 439


>UNIPROTKB|Q74DJ2 [details] [associations]
            symbol:GSU1324 "RNA-binding protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR HSSP:P19339
            HOGENOM:HOG000276232 RefSeq:NP_952377.1 ProteinModelPortal:Q74DJ2
            GeneID:2685944 KEGG:gsu:GSU1324 PATRIC:22025425 OMA:HMSYEAT
            ProtClustDB:CLSK828302 BioCyc:GSUL243231:GH27-1311-MONOMER
            Uniprot:Q74DJ2
        Length = 107

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/73 (39%), Positives = 45/73 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +++ E  E  L +LF   G V SV +I D +T + KG G+V M   +EA  AI++L
Sbjct:     5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETL 64

Query:    96 NGYALGNRILQVS 108
             +G  L NR++ VS
Sbjct:    65 DGALLRNRVITVS 77


>TIGR_CMR|GSU_1324 [details] [associations]
            symbol:GSU_1324 "RNA-binding protein" species:243231
            "Geobacter sulfurreducens PCA" [GO:0003723 "RNA binding"
            evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AE017180 GenomeReviews:AE017180_GR HSSP:P19339
            HOGENOM:HOG000276232 RefSeq:NP_952377.1 ProteinModelPortal:Q74DJ2
            GeneID:2685944 KEGG:gsu:GSU1324 PATRIC:22025425 OMA:HMSYEAT
            ProtClustDB:CLSK828302 BioCyc:GSUL243231:GH27-1311-MONOMER
            Uniprot:Q74DJ2
        Length = 107

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 29/73 (39%), Positives = 45/73 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +++ E  E  L +LF   G V SV +I D +T + KG G+V M   +EA  AI++L
Sbjct:     5 LYVGHMSYEATEDDLRRLFSVAGTVTSVHIITDPETGRSKGCGYVRMLTEEEAKEAIETL 64

Query:    96 NGYALGNRILQVS 108
             +G  L NR++ VS
Sbjct:    65 DGALLRNRVITVS 77


>CGD|CAL0004726 [details] [associations]
            symbol:orf19.7368 species:5476 "Candida albicans" [GO:0010494
            "cytoplasmic stress granule" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0008266
            "poly(U) RNA binding" evidence=IEA] [GO:0043488 "regulation of mRNA
            stability" evidence=IEA] [GO:0034063 "stress granule assembly"
            evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            CGD:CAL0004726 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:AACQ01000066 eggNOG:COG0724 HOGENOM:HOG000206748 KO:K13201
            RefSeq:XP_716609.1 ProteinModelPortal:Q5A4G6 STRING:Q5A4G6
            GeneID:3641737 KEGG:cal:CaO19.7368 Uniprot:Q5A4G6
        Length = 510

 Score = 137 (53.3 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 27/78 (34%), Positives = 50/78 (64%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+PE  +  L   F  F +++   V+ D+QT++ +G+GFVT  N  +A +A+Q++
Sbjct:   175 IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTM 234

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  L  R ++ ++ ++K
Sbjct:   235 NGEWLCGRAIRCNWASHK 252


>TAIR|locus:2159401 [details] [associations]
            symbol:GR-RBP3 "glycine-rich RNA-binding protein 3"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005507
            "copper ion binding" evidence=IDA] [GO:0006626 "protein targeting
            to mitochondrion" evidence=RCA] [GO:0009220 "pyrimidine
            ribonucleotide biosynthetic process" evidence=RCA] [GO:0009909
            "regulation of flower development" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0034968 "histone lysine methylation"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0005739 GO:GO:0005524
            EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.70.330
            GO:GO:0003676 GO:GO:0005507 EMBL:AB006696 eggNOG:COG0724
            HSSP:Q14103 KO:K12741 EMBL:AY060565 EMBL:AY125548 EMBL:AB493804
            IPI:IPI00542729 RefSeq:NP_200911.1 UniGene:At.24064
            ProteinModelPortal:Q9FNR1 SMR:Q9FNR1 STRING:Q9FNR1 PaxDb:Q9FNR1
            PRIDE:Q9FNR1 EnsemblPlants:AT5G61030.1 GeneID:836224
            KEGG:ath:AT5G61030 GeneFarm:3953 TAIR:At5g61030
            HOGENOM:HOG000029199 InParanoid:Q9FNR1 OMA:YANDRTS
            ProtClustDB:CLSN2916423 Genevestigator:Q9FNR1 Uniprot:Q9FNR1
        Length = 309

 Score = 133 (51.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/78 (34%), Positives = 48/78 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  +A   +E  L + F  +G V   +VI D +T + +GFGFVT T+ + A  AIQ+L
Sbjct:    42 LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query:    96 NGYALGNRILQVSFKTNK 113
             +G  L  R+++V++  ++
Sbjct:   102 DGRDLHGRVVKVNYANDR 119


>UNIPROTKB|E2R771 [details] [associations]
            symbol:RBM3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            GeneTree:ENSGT00700000104309 CTD:5935 KO:K13186 OMA:SDAMRAM
            EMBL:AAEX03026334 RefSeq:XP_863171.1 ProteinModelPortal:E2R771
            Ensembl:ENSCAFT00000024556 GeneID:609457 KEGG:cfa:609457
            Uniprot:E2R771
        Length = 162

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/72 (36%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L   T+E  L   F  FG +  V V++D +T + +GFGF+T T+ + A  A++++
Sbjct:     8 LFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRAM 67

Query:    96 NGYALGNRILQV 107
             NG +L  R ++V
Sbjct:    68 NGESLDGRQIRV 79


>TAIR|locus:2018794 [details] [associations]
            symbol:UBP1B "oligouridylate binding protein 1B"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003730 "mRNA 3'-UTR binding" evidence=ISS]
            [GO:0005829 "cytosol" evidence=RCA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC007843 HSSP:P33240
            HOGENOM:HOG000206748 KO:K13201 OMA:NGSKQLR ProtClustDB:CLSN2682164
            EMBL:AY085705 EMBL:BT026477 IPI:IPI00543090 RefSeq:NP_564018.1
            UniGene:At.43816 ProteinModelPortal:Q9LQI9 SMR:Q9LQI9 STRING:Q9LQI9
            PRIDE:Q9LQI9 EnsemblPlants:AT1G17370.1 GeneID:838309
            KEGG:ath:AT1G17370 TAIR:At1g17370 InParanoid:Q9LQI9
            PhylomeDB:Q9LQI9 Genevestigator:Q9LQI9 Uniprot:Q9LQI9
        Length = 419

 Score = 135 (52.6 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 29/82 (35%), Positives = 49/82 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             IFV +L+PE  +++L+  F  +      +V+ D +T + +GFGFV+  N  +A  AI  +
Sbjct:   141 IFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEI 200

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
              G  LG+R ++ ++ T KG TS
Sbjct:   201 TGKWLGSRQIRCNWAT-KGATS 221

 Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
 Identities = 30/86 (34%), Positives = 46/86 (53%)

Query:    25 PANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 84
             P N  N     ++V NLAPE  +  L + F   GA     VI +++  + KGFGFV  + 
Sbjct:   253 PEN--NAQYTTVYVGNLAPEVSQVDLHRHFHSLGA----GVIEEVRVQRDKGFGFVRYST 306

Query:    85 YDEAVVAIQSLNGYA-LGNRILQVSF 109
             + EA +AIQ  N ++ L  R ++ S+
Sbjct:   307 HVEAALAIQMGNTHSYLSGRQMKCSW 332


>UNIPROTKB|Q5JQF3 [details] [associations]
            symbol:PABPC5 "Polyadenylate-binding protein 5"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            HOVERGEN:HBG002295 EMBL:AL662874 UniGene:Hs.246590 HGNC:HGNC:13629
            IPI:IPI00647470 SMR:Q5JQF3 STRING:Q5JQF3 Ensembl:ENST00000373105
            HOGENOM:HOG000138175 OrthoDB:EOG4X3H3C Uniprot:Q5JQF3
        Length = 218

 Score = 128 (50.1 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 27/72 (37%), Positives = 44/72 (61%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV N+  + ++  L +LF  +G  +SVKVIRD  + K KGFGFV    ++ A  A+  L
Sbjct:    37 VFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDL 95

Query:    96 NGYALGNRILQV 107
             +G ++  ++L V
Sbjct:    96 HGKSIDGKVLYV 107

 Score = 107 (42.7 bits), Expect = 7.3e-06, P = 7.3e-06
 Identities = 22/73 (30%), Positives = 42/73 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             I++ NL     +  L + F  FG++   KV+  ++  + KGFG V  ++++EA  A+  +
Sbjct:   140 IYIKNLDETINDEKLKEEFSSFGSISRAKVM--MEVGQGKGFGVVCFSSFEEATKAVDEM 197

Query:    96 NGYALGNRILQVS 108
             NG  +G++ L V+
Sbjct:   198 NGRIVGSKPLHVT 210


>UNIPROTKB|E1P5S2 [details] [associations]
            symbol:RBM39 "RNA-binding protein 39" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0005813 "centrosome" evidence=IDA]
            [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0005813 EMBL:CH471077 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL357374 TIGRFAMs:TIGR01622
            UniGene:Hs.282901 HGNC:HGNC:15923 ChiTaRS:RBM39 IPI:IPI01015916
            SMR:E1P5S2 Ensembl:ENST00000407261 UCSC:uc002xed.3 Uniprot:E1P5S2
        Length = 373

 Score = 134 (52.2 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:    95 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 154

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   155 NGFELAGRPMKVGHVTERTDAS 176


>DICTYBASE|DDB_G0280529 [details] [associations]
            symbol:cstf2 "cleavage stimulation factor 64 kDa
            subunit" species:44689 "Dictyostelium discoideum" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0006379 "mRNA cleavage" evidence=ISS]
            [GO:0006378 "mRNA polyadenylation" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0280529 GO:GO:0005634 GO:GO:0000166
            GenomeReviews:CM000152_GR Gene3D:3.30.70.330 GO:GO:0006378
            GO:GO:0003723 EMBL:AAFI02000036 eggNOG:COG0724 GO:GO:0006379
            KO:K14407 InterPro:IPR025742 Pfam:PF14327 RefSeq:XP_641214.1
            ProteinModelPortal:Q54V94 EnsemblProtists:DDB0233706 GeneID:8622595
            KEGG:ddi:DDB_G0280529 InParanoid:Q54V94 Uniprot:Q54V94
        Length = 541

 Score = 136 (52.9 bits), Expect = 3.1e-08, P = 3.1e-08
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV N+  E  E  L ++F   G V S +++ D  + K KG+GF    N D A+ AI++ 
Sbjct:     5 VFVGNIPYEANEKDLIEIFSGVGKVVSFRLLEDKDSKKSKGYGFCEYENVDNALSAIRNY 64

Query:    96 NGYALGNRILQVSFKTNK 113
               +  GNR+L+VS+  N+
Sbjct:    65 MLFTFGNRVLRVSYADNE 82


>UNIPROTKB|K7GNR2 [details] [associations]
            symbol:RBMX "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            Gene3D:3.30.70.330 GeneTree:ENSGT00700000104336 EMBL:FP102148
            Ensembl:ENSSSCT00000034855 Uniprot:K7GNR2
        Length = 129

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/76 (34%), Positives = 44/76 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L  ET E  L  +FG +G +  V +++D +TNK +GF FVT  +  +A  A + +
Sbjct:    10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69

Query:    96 NGYALGNRILQVSFKT 111
             NG +L  + ++V   T
Sbjct:    70 NGKSLDGKAIKVEQAT 85


>TAIR|locus:2023903 [details] [associations]
            symbol:ATE1 "ATPase E1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0000166 UniGene:At.66943
            Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724
            HOGENOM:HOG000276232 EMBL:AK228412 IPI:IPI00541371
            RefSeq:NP_563931.2 ProteinModelPortal:Q0WRA3 SMR:Q0WRA3
            STRING:Q0WRA3 PaxDb:Q0WRA3 PRIDE:Q0WRA3 EnsemblPlants:AT1G13690.1
            GeneID:837930 KEGG:ath:AT1G13690 TAIR:At1g13690 InParanoid:Q0WRA3
            OMA:AQPIWAD PhylomeDB:Q0WRA3 ProtClustDB:CLSN2690943
            Genevestigator:Q0WRA3 Uniprot:Q0WRA3
        Length = 177

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 27/74 (36%), Positives = 42/74 (56%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V  LA E  ES+L   F PFG ++ VK   D    K + FGFVT    ++A  A+ ++
Sbjct:    15 LYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAMDNM 74

Query:    96 NGYALGNRILQVSF 109
             +G  L  R+L V++
Sbjct:    75 DGAELYGRVLTVNY 88


>GENEDB_PFALCIPARUM|PF14_0194 [details] [associations]
            symbol:PF14_0194 "spliceosome-associated
            protein, putative" species:5833 "Plasmodium falciparum" [GO:0005681
            "spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=ISS] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
            PROSITE:PS50102 SMART:SM00360 GO:GO:0008380 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0005681 GO:GO:0003676 EMBL:AE014187
            HSSP:P11940 KO:K12831 RefSeq:XP_001348367.1
            ProteinModelPortal:Q8ILQ0 IntAct:Q8ILQ0 MINT:MINT-1577513
            EnsemblProtists:PF14_0194:mRNA GeneID:811775 KEGG:pfa:PF14_0194
            EuPathDB:PlasmoDB:PF3D7_1420000 ProtClustDB:CLSZ2501032
            Uniprot:Q8ILQ0
        Length = 484

 Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/83 (31%), Positives = 54/83 (65%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+ NL  E +E +L+ +F  FG + +VKV+R+ + +  KG GF++  N++ + +AI+++
Sbjct:   109 LFIGNLDDEVDEKMLFDIFSSFGQIMTVKVMRN-EDDTSKGHGFISYDNFESSDLAIENM 167

Query:    96 NGYALGNRILQVSF---KTNKGK 115
             N   + N+ + +S+   K +KG+
Sbjct:   168 NNQFICNKKVHISYAFKKDSKGE 190


>UNIPROTKB|Q8ILQ0 [details] [associations]
            symbol:PF14_0194 "Spliceosome-associated protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005681 "spliceosomal
            complex" evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0008380 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0005681 GO:GO:0003676 EMBL:AE014187 HSSP:P11940 KO:K12831
            RefSeq:XP_001348367.1 ProteinModelPortal:Q8ILQ0 IntAct:Q8ILQ0
            MINT:MINT-1577513 EnsemblProtists:PF14_0194:mRNA GeneID:811775
            KEGG:pfa:PF14_0194 EuPathDB:PlasmoDB:PF3D7_1420000
            ProtClustDB:CLSZ2501032 Uniprot:Q8ILQ0
        Length = 484

 Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 26/83 (31%), Positives = 54/83 (65%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+ NL  E +E +L+ +F  FG + +VKV+R+ + +  KG GF++  N++ + +AI+++
Sbjct:   109 LFIGNLDDEVDEKMLFDIFSSFGQIMTVKVMRN-EDDTSKGHGFISYDNFESSDLAIENM 167

Query:    96 NGYALGNRILQVSF---KTNKGK 115
             N   + N+ + +S+   K +KG+
Sbjct:   168 NNQFICNKKVHISYAFKKDSKGE 190


>UNIPROTKB|G3XAC6 [details] [associations]
            symbol:RBM39 "RNA-binding region (RNP1, RRM) containing 2,
            isoform CRA_f" species:9606 "Homo sapiens" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 EMBL:CH471077 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:AL357374 TIGRFAMs:TIGR01622
            UniGene:Hs.282901 HGNC:HGNC:15923 ChiTaRS:RBM39
            ProteinModelPortal:G3XAC6 SMR:G3XAC6 Ensembl:ENST00000338163
            ArrayExpress:G3XAC6 Bgee:G3XAC6 Uniprot:G3XAC6
        Length = 423

 Score = 134 (52.2 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|G3XAP0 [details] [associations]
            symbol:RBM23 "RNA binding motif protein 23, isoform CRA_f"
            species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005634
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723
            EMBL:AL132780 EMBL:CH471078 EMBL:AL135998 UniGene:Hs.4997
            HGNC:HGNC:20155 ChiTaRS:RBM23 TIGRFAMs:TIGR01622
            ProteinModelPortal:G3XAP0 SMR:G3XAP0 Ensembl:ENST00000542016
            ArrayExpress:G3XAP0 Bgee:G3XAP0 Uniprot:G3XAP0
        Length = 269

 Score = 130 (50.8 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 26/84 (30%), Positives = 49/84 (58%)

Query:    30 NGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAV 89
             NG    ++V +L     E +L  +F PFG + ++ +++D  T + KG+GF+T ++ + A 
Sbjct:    89 NGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECAR 148

Query:    90 VAIQSLNGYALGNRILQVSFKTNK 113
              A++ LNG+ L  R ++V   T +
Sbjct:   149 RALEQLNGFELAGRPMRVGHVTER 172


>UNIPROTKB|I3LBN9 [details] [associations]
            symbol:TRA2B "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048026 "positive regulation of mRNA splicing, via
            spliceosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IEA] [GO:0000381 "regulation of
            alternative mRNA splicing, via spliceosome" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0000166 GO:GO:0003729 Gene3D:3.30.70.330
            GO:GO:0000398 GO:GO:0048026 GO:GO:0000381
            GeneTree:ENSGT00700000104309 OMA:YDDREYY Ensembl:ENSSSCT00000025696
            Uniprot:I3LBN9
        Length = 280

 Score = 130 (50.8 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 27/79 (34%), Positives = 43/79 (54%)

Query:    35 CIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQS 94
             C+ V+ L+  T ES L ++F  +G +  V ++ D Q+ + +GF FV   N D+A  A + 
Sbjct:   111 CLGVFGLSLYTTESDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 170

Query:    95 LNGYALGNRILQVSFKTNK 113
              NG  L  R ++V F   K
Sbjct:   171 ANGMELDGRRIRVDFSITK 189


>POMBASE|SPBC18H10.03 [details] [associations]
            symbol:tif35 "translation initiation factor eIF3g"
            species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
            translational initiation" evidence=NAS] [GO:0003723 "RNA binding"
            evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006413 "translational initiation"
            evidence=ISS] [GO:0016282 "eukaryotic 43S preinitiation complex"
            evidence=IDA] [GO:0071540 "eukaryotic translation initiation factor
            3 complex, eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation
            initiation factor 3 complex, eIF3m" evidence=IDA] [GO:0003743
            "translation initiation factor activity" evidence=ISS]
            InterPro:IPR000504 InterPro:IPR012677 InterPro:IPR017334
            Pfam:PF00076 PIRSF:PIRSF037949 PROSITE:PS50102 SMART:SM00360
            PomBase:SPBC18H10.03 GO:GO:0005829 GO:GO:0005634 GO:GO:0000166
            EMBL:CU329671 Gene3D:3.30.70.330 GenomeReviews:CU329671_GR
            GO:GO:0003723 GO:GO:0003743 eggNOG:COG0724 GO:GO:0002183 KO:K03248
            HAMAP:MF_03006 InterPro:IPR024675 PANTHER:PTHR10352 Pfam:PF12353
            GO:GO:0016282 GO:GO:0071540 GO:GO:0071541 HOGENOM:HOG000239560
            OMA:NSEFDAP OrthoDB:EOG4QJVX7 EMBL:AB011823 EMBL:D89144 PIR:T39767
            RefSeq:NP_595727.1 ProteinModelPortal:P78795 STRING:P78795
            EnsemblFungi:SPBC18H10.03.1 GeneID:2540819 KEGG:spo:SPBC18H10.03
            NextBio:20801936 Uniprot:P78795
        Length = 282

 Score = 130 (50.8 bits), Expect = 3.9e-08, P = 3.9e-08
 Identities = 29/72 (40%), Positives = 41/72 (56%)

Query:    38 VYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSLNG 97
             V NL+ +T E  L  LF  FG +Q V + +D +T + KGF FV+  + D A+ A   L+G
Sbjct:   206 VTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDCAIKARDRLDG 265

Query:    98 YALGNRILQVSF 109
             Y   N IL+  F
Sbjct:   266 YGWNNLILRCEF 277


>TAIR|locus:2076096 [details] [associations]
            symbol:GRP4 "glycine-rich RNA-binding protein 4"
            species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS;IDA]
            [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0006970 "response
            to osmotic stress" evidence=IMP] [GO:0009409 "response to cold"
            evidence=IEP] [GO:0009414 "response to water deprivation"
            evidence=IEP] [GO:0009651 "response to salt stress" evidence=IMP]
            [GO:0006364 "rRNA processing" evidence=RCA] [GO:0009664 "plant-type
            cell wall organization" evidence=RCA] [GO:0042545 "cell wall
            modification" evidence=RCA] InterPro:IPR000504 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005739
            EMBL:CP002686 GO:GO:0000166 GO:GO:0009651 Gene3D:3.30.70.330
            GO:GO:0003723 GO:GO:0003690 GO:GO:0003697 EMBL:AP001297
            eggNOG:COG0724 HOGENOM:HOG000276232 HSSP:Q14103
            ProtClustDB:PLN03134 EMBL:AY070755 EMBL:AY097374 EMBL:AY085838
            IPI:IPI00523873 RefSeq:NP_189025.1 RefSeq:NP_850629.1
            UniGene:At.8272 ProteinModelPortal:Q9LIS2 SMR:Q9LIS2 STRING:Q9LIS2
            PaxDb:Q8LDS0 PRIDE:Q9LIS2 EnsemblPlants:AT3G23830.1
            EnsemblPlants:AT3G23830.2 GeneID:821966 KEGG:ath:AT3G23830
            GeneFarm:3951 TAIR:At3g23830 InParanoid:Q9LIS2 OMA:CEDSANN
            PhylomeDB:Q9LIS2 Genevestigator:Q9LIS2 Uniprot:Q9LIS2
        Length = 136

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L+  T++S L Q F  FG V    VI D +T + +GFGFV+ +  D A  AI+ +
Sbjct:    37 LFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEM 96

Query:    96 NGYALGNRILQVSFKTNK 113
             +G  L  R ++V+  T +
Sbjct:    97 DGKELNGRQIRVNLATER 114


>TAIR|locus:2100840 [details] [associations]
            symbol:AT3G04500 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
            [GO:0008150 "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC022287 eggNOG:NOG306795
            HSSP:O08583 HOGENOM:HOG000239273 EMBL:BT005571 EMBL:AK118315
            IPI:IPI00527216 RefSeq:NP_187100.1 UniGene:At.40828
            ProteinModelPortal:Q9M837 SMR:Q9M837 PaxDb:Q9M837 PRIDE:Q9M837
            EnsemblPlants:AT3G04500.1 GeneID:819606 KEGG:ath:AT3G04500
            TAIR:At3g04500 InParanoid:Q9M837 OMA:SNWRERT PhylomeDB:Q9M837
            ProtClustDB:CLSN2684283 ArrayExpress:Q9M837 Genevestigator:Q9M837
            Uniprot:Q9M837
        Length = 245

 Score = 128 (50.1 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 28/81 (34%), Positives = 45/81 (55%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F  +L  E  + VL + F  F      KVIRD +T K KG+GFV+  N  +   A++ +
Sbjct:   139 LFCGDLGNEVNDDVLSKAFARFPTFNMAKVIRDKRTGKTKGYGFVSFLNPADLAAALKEM 198

Query:    96 NGYALGNRILQVSFKTNKGKT 116
             NG  +GNR +++   + K +T
Sbjct:   199 NGKYVGNRPIKLRKSSWKERT 219


>POMBASE|SPAC25G10.01 [details] [associations]
            symbol:SPAC25G10.01 "RNA-binding protein" species:4896
            "Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            PomBase:SPAC25G10.01 GO:GO:0005634 EMBL:CU329670 GO:GO:0000166
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG297815 PIR:T38372
            RefSeq:XP_001713104.1 ProteinModelPortal:Q10422
            EnsemblFungi:SPAC25G10.01.1 GeneID:3361412 KEGG:spo:SPAC25G10.01
            OMA:ERAVEAN OrthoDB:EOG4KPXM5 NextBio:20811463 Uniprot:Q10422
        Length = 297

 Score = 130 (50.8 bits), Expect = 4.4e-08, P = 4.4e-08
 Identities = 30/86 (34%), Positives = 46/86 (53%)

Query:    25 PANTMNGS---GWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVT 81
             P +   GS   G  +FV  +A   +E  L Q+F  FG V  V+++R+  T   +GFGF++
Sbjct:    89 PQSAPEGSENLGNDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLS 148

Query:    82 MTNYDEAVVAIQSLNGYALGNRILQV 107
              +  +EA  AI +LN      R+L V
Sbjct:   149 FSTVEEATSAIDNLNSQEFYGRVLNV 174


>TAIR|locus:2825067 [details] [associations]
            symbol:BRN2 "Bruno-like 2" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA;ISS] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 EMBL:CP002684 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 KO:K13207 IPI:IPI00516617 RefSeq:NP_973752.1
            UniGene:At.42544 ProteinModelPortal:F4I0X0 SMR:F4I0X0 PRIDE:F4I0X0
            EnsemblPlants:AT1G03457.2 GeneID:839497 KEGG:ath:AT1G03457
            OMA:MENEERV Uniprot:F4I0X0
        Length = 438

 Score = 133 (51.9 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 35/100 (35%), Positives = 51/100 (51%)

Query:    16 GDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCK 75
             G  + SS+    T   +G  +F+YN+  E E+  L   F PFG V S KV  D  T   K
Sbjct:   324 GTSIPSSL---QTEGPAGANLFIYNIPREFEDQELAATFQPFGKVLSAKVFVDKATGISK 380

Query:    76 GFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGK 115
              FGF++  +   A  AI ++NG  L  + L+V  K + G+
Sbjct:   381 CFGFISYDSQAAAQNAINTMNGCQLSGKKLKVQLKRDNGQ 420


>ZFIN|ZDB-GENE-040426-2852 [details] [associations]
            symbol:rbm39a "RNA binding motif protein 39a"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            ZFIN:ZDB-GENE-040426-2852 GO:GO:0005634 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:COG0724 HSSP:P11940
            HOVERGEN:HBG057646 TIGRFAMs:TIGR01622 HOGENOM:HOG000236253
            KO:K13091 OMA:AGWDTEI OrthoDB:EOG4RJG1P
            GeneTree:ENSGT00690000102089 EMBL:BX001056 EMBL:BC044487
            IPI:IPI00498221 RefSeq:NP_001012304.1 UniGene:Dr.38353 SMR:Q803H1
            Ensembl:ENSDART00000017973 Ensembl:ENSDART00000135435 GeneID:406251
            KEGG:dre:406251 CTD:406251 NextBio:20817886 Uniprot:Q803H1
        Length = 523

 Score = 134 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 30/99 (30%), Positives = 55/99 (55%)

Query:    21 SSILPANTMNGSG--WCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFG 78
             ++ L  N   GS     ++V +L     E +L  +F PFG + S++++ D +T + KG+G
Sbjct:   231 AAALANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYG 290

Query:    79 FVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
             F+T ++ + A  A++ LNG+ L  R ++V   T +   S
Sbjct:   291 FITFSDAECAKKALEQLNGFELAGRPMKVGHVTERTDAS 329


>RGD|1310071 [details] [associations]
            symbol:Rbm39 "RNA binding motif protein 39" species:10116
            "Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005813
            "centrosome" evidence=ISO] [GO:0015630 "microtubule cytoskeleton"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:1310071
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 EMBL:CH474050 eggNOG:COG0724
            HOVERGEN:HBG057646 TIGRFAMs:TIGR01622 CTD:9584 HOGENOM:HOG000236253
            KO:K13091 OrthoDB:EOG4RJG1P IPI:IPI00555302 GeneID:100910882
            KEGG:rno:100910882 EMBL:BC091394 RefSeq:NP_001013225.1
            RefSeq:XP_003749654.1 UniGene:Rn.8555 SMR:Q5BJP4 STRING:Q5BJP4
            GeneID:362251 KEGG:rno:362251 UCSC:RGD:1310071 InParanoid:Q5BJP4
            NextBio:679201 Genevestigator:Q5BJP4 Uniprot:Q5BJP4
        Length = 524

 Score = 134 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|F6QIA5 [details] [associations]
            symbol:RBM39 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622 OMA:AGWDTEI
            GeneTree:ENSGT00690000102089 EMBL:DAAA02036526 IPI:IPI01017797
            Ensembl:ENSBTAT00000002491 Uniprot:F6QIA5
        Length = 525

 Score = 134 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|F2Z5I2 [details] [associations]
            symbol:RBM39 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005634 GO:GO:0005813 GO:GO:0000166 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622 OMA:AGWDTEI
            GeneTree:ENSGT00690000102089 EMBL:CU210870
            Ensembl:ENSSSCT00000007997 ArrayExpress:F2Z5I2 Uniprot:F2Z5I2
        Length = 525

 Score = 134 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|E1BRU3 [details] [associations]
            symbol:LOC100858247 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005813 "centrosome" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005813 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622
            OMA:AGWDTEI GeneTree:ENSGT00690000102089 EMBL:AADN02019511
            IPI:IPI00601860 Ensembl:ENSGALT00000002354 Uniprot:E1BRU3
        Length = 529

 Score = 134 (52.2 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|E2R4L0 [details] [associations]
            symbol:RBM39 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005813 "centrosome" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA processing"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0005634 GO:GO:0005813 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622
            CTD:9584 KO:K13091 OMA:AGWDTEI GeneTree:ENSGT00690000102089
            EMBL:AAEX03013911 RefSeq:XP_864959.2 ProteinModelPortal:E2R4L0
            SMR:E2R4L0 PRIDE:E2R4L0 Ensembl:ENSCAFT00000013241 GeneID:477216
            KEGG:cfa:477216 NextBio:20852735 Uniprot:E2R4L0
        Length = 530

 Score = 134 (52.2 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|Q14498 [details] [associations]
            symbol:RBM39 "RNA-binding protein 39" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0006396 "RNA processing" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005813
            "centrosome" evidence=IDA] [GO:0015630 "microtubule cytoskeleton"
            evidence=IDA] InterPro:IPR000504 InterPro:IPR006509
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0005813 EMBL:CH471077 GO:GO:0005654 GO:GO:0006355
            GO:GO:0008380 GO:GO:0000166 GO:GO:0016607 GO:GO:0006397
            Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
            eggNOG:COG0724 EMBL:AL357374 HOVERGEN:HBG057646 TIGRFAMs:TIGR01622
            EMBL:L10910 EMBL:L10911 EMBL:AK299678 EMBL:BC131543 EMBL:BC141835
            EMBL:BC158172 IPI:IPI00163505 IPI:IPI00215801 IPI:IPI00514831
            PIR:I55595 RefSeq:NP_001229528.1 RefSeq:NP_001229529.1
            RefSeq:NP_004893.1 RefSeq:NP_909122.1 UniGene:Hs.282901 PDB:2JRS
            PDBsum:2JRS ProteinModelPortal:Q14498 SMR:Q14498 IntAct:Q14498
            MINT:MINT-5004569 STRING:Q14498 PhosphoSite:Q14498 DMDM:28201880
            PaxDb:Q14498 PRIDE:Q14498 Ensembl:ENST00000253363
            Ensembl:ENST00000361162 Ensembl:ENST00000528062 GeneID:9584
            KEGG:hsa:9584 UCSC:uc002xeb.3 UCSC:uc002xec.3 CTD:9584
            GeneCards:GC20M034291 HGNC:HGNC:15923 HPA:HPA001591 MIM:604739
            neXtProt:NX_Q14498 PharmGKB:PA34450 HOGENOM:HOG000236253
            InParanoid:Q14498 KO:K13091 OMA:AGWDTEI OrthoDB:EOG4RJG1P
            PhylomeDB:Q14498 ChiTaRS:RBM39 EvolutionaryTrace:Q14498
            GenomeRNAi:9584 NextBio:35953 ArrayExpress:Q14498 Bgee:Q14498
            CleanEx:HS_RBM39 Genevestigator:Q14498 GermOnline:ENSG00000131051
            Uniprot:Q14498
        Length = 530

 Score = 134 (52.2 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>MGI|MGI:2157953 [details] [associations]
            symbol:Rbm39 "RNA binding motif protein 39" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=TAS] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0006351 "transcription,
            DNA-dependent" evidence=TAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR006509 InterPro:IPR012677
            Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2157953
            GO:GO:0005634 GO:GO:0005813 GO:GO:0006355 GO:GO:0008380
            GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
            EMBL:CH466551 GO:GO:0003723 GO:GO:0003713 eggNOG:COG0724
            EMBL:AL929404 HOVERGEN:HBG057646 TIGRFAMs:TIGR01622 CTD:9584
            HOGENOM:HOG000236253 KO:K13091 OMA:AGWDTEI OrthoDB:EOG4RJG1P
            ChiTaRS:RBM39 EMBL:AY061882 EMBL:AK147076 EMBL:BX649640
            EMBL:BC004000 EMBL:BC030493 EMBL:BC086645 IPI:IPI00127763
            IPI:IPI00223371 IPI:IPI00223372 RefSeq:NP_573505.2
            UniGene:Mm.392436 UniGene:Mm.436932 PDB:2LQ5 PDB:3S6E PDBsum:2LQ5
            PDBsum:3S6E ProteinModelPortal:Q8VH51 SMR:Q8VH51 IntAct:Q8VH51
            STRING:Q8VH51 PhosphoSite:Q8VH51 PaxDb:Q8VH51 PRIDE:Q8VH51
            Ensembl:ENSMUST00000029149 Ensembl:ENSMUST00000109587
            Ensembl:ENSMUST00000146297 GeneID:170791 KEGG:mmu:170791
            GeneTree:ENSGT00690000102089 InParanoid:Q5RJI0
            EvolutionaryTrace:Q8VH51 NextBio:370435 Bgee:Q8VH51
            CleanEx:MM_RBM39 Genevestigator:Q8VH51
            GermOnline:ENSMUSG00000027620 Uniprot:Q8VH51
        Length = 530

 Score = 134 (52.2 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|F1MA64 [details] [associations]
            symbol:Rbm39 "Protein Rbm39" species:10116 "Rattus
            norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006509 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 RGD:1310071 GO:GO:0005634 GO:GO:0005813 GO:GO:0000166
            GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0003723 TIGRFAMs:TIGR01622
            KO:K13091 OMA:AGWDTEI GeneTree:ENSGT00690000102089 EMBL:AC118414
            IPI:IPI00555302 RefSeq:XP_003749653.1 ProteinModelPortal:F1MA64
            SMR:F1MA64 PRIDE:F1MA64 Ensembl:ENSRNOT00000026964 GeneID:100910882
            KEGG:rno:100910882 ArrayExpress:F1MA64 Uniprot:F1MA64
        Length = 530

 Score = 134 (52.2 bits), Expect = 4.9e-08, P = 4.9e-08
 Identities = 26/82 (31%), Positives = 50/82 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L     E +L  +F PFG ++S++++ D +T + KG+GF+T ++ + A  A++ L
Sbjct:   252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311

Query:    96 NGYALGNRILQVSFKTNKGKTS 117
             NG+ L  R ++V   T +   S
Sbjct:   312 NGFELAGRPMKVGHVTERTDAS 333


>UNIPROTKB|G4MY51 [details] [associations]
            symbol:MGG_01274 "RNA-binding protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
            EMBL:CM001232 RefSeq:XP_003714189.1 EnsemblFungi:MGG_01274T0
            GeneID:2679440 KEGG:mgr:MGG_01274 Uniprot:G4MY51
        Length = 412

 Score = 132 (51.5 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 28/62 (45%), Positives = 41/62 (66%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV NLA ET +  L + F  + +VQ  KVIRD +TNK KG+GFV+ ++ D+   A + +
Sbjct:   272 LFVGNLAGETTDESLLKAFSRWKSVQKSKVIRDKRTNKSKGYGFVSFSDPDDFFQAAKEM 331

Query:    96 NG 97
             NG
Sbjct:   332 NG 333


>DICTYBASE|DDB_G0291486 [details] [associations]
            symbol:DDB_G0291486 "putative splicing regulator"
            species:44689 "Dictyostelium discoideum" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR000504 InterPro:IPR002343
            InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00961 PROSITE:PS50102
            SMART:SM00360 dictyBase:DDB_G0291486 EMBL:AAFI02000177
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 eggNOG:NOG251494
            RefSeq:XP_635247.1 ProteinModelPortal:Q54EJ3
            EnsemblProtists:DDB0233674 GeneID:8628193 KEGG:ddi:DDB_G0291486
            InParanoid:Q54EJ3 OMA:PMGNGMN Uniprot:Q54EJ3
        Length = 489

 Score = 133 (51.9 bits), Expect = 5.5e-08, P = 5.5e-08
 Identities = 39/111 (35%), Positives = 57/111 (51%)

Query:     7 GLQRFSPLTGDLLASSILPANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVI 66
             G+ +  P+ G+    S+ P     GS   +FVYN+     ++ L  LF  +G V S KV 
Sbjct:   383 GMNQGGPM-GNKKNQSVGP----QGSN--LFVYNIPNYFSDNDLLGLFQQYGIVVSAKVY 435

Query:    67 RDLQTNKCKGFGFVTMTNYDEAVVAIQSLNGYALGNRILQVSFKTNKGKTS 117
              D  T   KGFGFV+  N   A +AI +L+G  +  + L+VS K   G+ S
Sbjct:   436 VDKNTGVSKGFGFVSYDNPASANLAISNLHGQMMAGKKLKVSLKQTSGQGS 486

 Score = 100 (40.3 bits), Expect = 0.00020, P = 0.00020
 Identities = 30/83 (36%), Positives = 44/83 (53%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV  L    EE  + +LF P G V+ + ++R    ++ KG GF+   N + A+ AI +L
Sbjct:    93 LFVGMLPRSYEEEQIRELFEPHGVVEDICILRG-PNSESKGCGFIKFDNRESALSAIATL 151

Query:    96 NGYAL-GN-RILQVSFK-TNKGK 115
             NG  L G+   L V F  T K K
Sbjct:   152 NGMKLDGSPNPLVVKFADTEKDK 174


>UNIPROTKB|Q29RT0 [details] [associations]
            symbol:RBMX "RNA-binding motif protein, X chromosome"
            species:9913 "Bos taurus" [GO:0044530 "supraspliceosomal complex"
            evidence=ISS] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=ISS] [GO:0048026 "positive regulation of
            mRNA splicing, via spliceosome" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0001047 "core promoter binding" evidence=ISS]
            [GO:0070062 "extracellular vesicular exosome" evidence=ISS]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
            [GO:0003723 "RNA binding" evidence=ISS] [GO:0051260 "protein
            homooligomerization" evidence=ISS] [GO:0048025 "negative regulation
            of mRNA splicing, via spliceosome" evidence=ISS] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISS] [GO:0005719 "nuclear
            euchromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0003729 "mRNA binding" evidence=ISS] [GO:0071347 "cellular
            response to interleukin-1" evidence=ISS] [GO:0006509 "membrane
            protein ectodomain proteolysis" evidence=ISS] [GO:0008380 "RNA
            splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
            GO:GO:0008380 GO:GO:0000166 GO:GO:0070062 GO:GO:0051260
            GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0045944
            GO:GO:0003682 GO:GO:0006366 GO:GO:0006509 GO:GO:0001047
            GO:GO:0005719 GO:GO:0071347 GO:GO:0071013 GO:GO:0048025
            eggNOG:COG0724 GO:GO:0048026 GO:GO:0000381 GO:GO:0044530
            EMBL:BC114040 IPI:IPI00721392 RefSeq:NP_001040075.1
            RefSeq:XP_001250252.1 UniGene:Bt.59490 ProteinModelPortal:Q29RT0
            SMR:Q29RT0 Ensembl:ENSBTAT00000066112 GeneID:617969 GeneID:782306
            KEGG:bta:617969 KEGG:bta:782306 CTD:27288
            GeneTree:ENSGT00700000104336 HOGENOM:HOG000276235
            HOVERGEN:HBG063314 InParanoid:Q29RT0 OMA:GDFDLRP OrthoDB:EOG4WSWBK
            NextBio:20900925 InterPro:IPR012604 Pfam:PF08081 Uniprot:Q29RT0
        Length = 396

 Score = 131 (51.2 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 25/76 (32%), Positives = 46/76 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +F+  L  ET+E  L   FG +G +  V +++D +TNK +GF F+T  +  +A  A++ +
Sbjct:    10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69

Query:    96 NGYALGNRILQVSFKT 111
             NG +L  + ++V+  T
Sbjct:    70 NGKSLDGKAIKVAQAT 85


>RGD|1563142 [details] [associations]
            symbol:Pabpc1l "poly(A) binding protein, cytoplasmic 1-like"
            species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            InterPro:IPR000504 InterPro:IPR002004 InterPro:IPR006515
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00658 PROSITE:PS50102
            PROSITE:PS51309 SMART:SM00360 SMART:SM00517 RGD:1563142
            GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 Gene3D:1.10.1900.10
            SUPFAM:SSF63570 TIGRFAMs:TIGR01628 OrthoDB:EOG4K6G3V
            GeneTree:ENSGT00640000091232 IPI:IPI00778604
            ProteinModelPortal:D3ZAS7 Ensembl:ENSRNOT00000055172
            UCSC:RGD:1563142 Uniprot:D3ZAS7
        Length = 607

 Score = 133 (51.9 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 28/72 (38%), Positives = 42/72 (58%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             I+V NL  + +E  L  LF  FG  QSVKV+RD    + +GFGF+    ++EA  A+  +
Sbjct:   193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKAVDHM 251

Query:    96 NGYALGNRILQV 107
             NG  +  ++L V
Sbjct:   252 NGKEVSGQLLYV 263

 Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
 Identities = 24/78 (30%), Positives = 43/78 (55%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V NL     +  L ++F  +G + S KV+ +  ++  KGFGFV  ++ +EA  A+  +
Sbjct:   296 LYVKNLDDSINDDRLKEVFSTYGVITSAKVMTE--SSHSKGFGFVCFSSPEEATKAVTEM 353

Query:    96 NGYALGNRILQVSFKTNK 113
             NG  +G + L V+    K
Sbjct:   354 NGRIVGTKPLYVALAQRK 371

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 29/90 (32%), Positives = 47/90 (52%)

Query:    25 PANTMNGSGWCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTN 84
             P    +G G  IF+ NL    +   L+  F  FG++ S KV+ +   +  +GFGFV    
Sbjct:    91 PGLRRSGMG-NIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN--EHGSRGFGFVHFET 147

Query:    85 YDEAVVAIQSLNGYALGNRILQVS-FKTNK 113
             ++ A  AI ++NG  L +R + V  FK+ +
Sbjct:   148 HEAAQKAINTMNGMLLNDRKVFVGHFKSRQ 177

 Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
 Identities = 17/61 (27%), Positives = 38/61 (62%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             ++V +L P+  E++L+++F P G + S++V RD+ T +  G+ ++      +A  A+ ++
Sbjct:    13 LYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTM 72

Query:    96 N 96
             N
Sbjct:    73 N 73


>UNIPROTKB|F1N4Q4 [details] [associations]
            symbol:PABPC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR006515 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
            SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723
            KO:K13126 TIGRFAMs:TIGR01628 GeneTree:ENSGT00640000091232
            CTD:140886 OMA:FSEYGPT EMBL:DAAA02070194 IPI:IPI00700504
            RefSeq:NP_001179218.1 UniGene:Bt.60242 ProteinModelPortal:F1N4Q4
            Ensembl:ENSBTAT00000026566 GeneID:511286 KEGG:bta:511286
            NextBio:20869865 Uniprot:F1N4Q4
        Length = 382

 Score = 130 (50.8 bits), Expect = 7.6e-08, P = 7.6e-08
 Identities = 27/72 (37%), Positives = 43/72 (59%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             +FV N   + ++  L +LF  +G  +SVKVIRD  + K KGFGFV    ++ A  A+  L
Sbjct:   201 VFVKNFGDDMDDDKLKELFSEYGPTESVKVIRD-SSGKSKGFGFVRYETHEAAQKAVLDL 259

Query:    96 NGYALGNRILQV 107
             +G ++  ++L V
Sbjct:   260 HGKSIDGKVLYV 271

 Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
 Identities = 22/73 (30%), Positives = 44/73 (60%)

Query:    36 IFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMTNYDEAVVAIQSL 95
             I++ NL    ++  L + F  FG++   KV+  ++  + KGFG +  ++++EA  A+  +
Sbjct:   304 IYIKNLDETIDDEKLKEEFSSFGSISRAKVM--VEVGQGKGFGVICFSSFEEATKAVDEM 361

Query:    96 NGYALGNRILQVS 108
             NG  +G++ LQV+
Sbjct:   362 NGRIVGSKPLQVT 374

 Score = 103 (41.3 bits), Expect = 6.5e-05, P = 6.5e-05
 Identities = 31/88 (35%), Positives = 44/88 (50%)

Query:    25 PANTMNGSG-WCIFVYNLAPETEESVLWQLFGPFGAVQSVKVIRDLQTNKCKGFGFVTMT 83
             P + +  SG   IF+ NL    +   L+ LF  FG++ S KV+ D   N  KG+ +V   
Sbjct:    96 PDDRLRKSGIGNIFIKNLDKSIDNRALFYLFSAFGSILSCKVVCD--DNGSKGYAYVHFD 153

Query:    84 NYDEAVVAIQSLNGYALGNRILQVS-FK 110
             +   A  AI  +NG  L NR + V  FK
Sbjct:   154 SLAAANRAIWHMNGVRLNNRQVYVGRFK 181

WARNING:  HSPs involving 886 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      117       117   0.00091  102 3  11 22  0.48    30
                                                     29  0.46    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1136
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  116 KB (2077 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.45u 0.08s 11.53t   Elapsed:  00:00:06
  Total cpu time:  11.48u 0.08s 11.56t   Elapsed:  00:00:06
  Start:  Thu Aug 15 12:03:09 2013   End:  Thu Aug 15 12:03:15 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with fne fne fne found in neurons	protein from Drosophila melanogaster	4.1e-49
BLAST match view associations BLAST with Rbp9 Rbp9 Rbp9 RNA-binding protein 9	protein from Drosophila melanogaster	1.5e-44
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Bos taurus	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Canis lupus familiaris	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	6.1e-39
BLAST match view associations BLAST with elavl4 elavl4 elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	gene_product from Danio rerio	6.1e-39
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	9.9e-39
BLAST match view associations BLAST with elavl2 elavl2 elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	gene_product from Danio rerio	1.6e-38
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 ELAV-like protein 4	protein from Homo sapiens	5.5e-38
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	protein from Mus musculus	5.5e-38
BLAST match view associations BLAST with Elavl4 Elavl4 Elavl4 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4	gene from Rattus norvegicus	5.5e-38
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-37
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 ELAV-like protein 2	protein from Homo sapiens	1.1e-37
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 ELAV-like protein 2	protein from Homo sapiens	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	gene from Rattus norvegicus	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV-like protein 2	protein from Rattus norvegicus	1.1e-37
BLAST match view associations BLAST with elavl3 elavl3 elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	gene_product from Danio rerio	1.1e-37
BLAST match view associations BLAST with Elavl2 Elavl2 Elavl2 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	protein from Mus musculus	1.0e-36
BLAST match view associations BLAST with F1SNK9 F1SNK9 F1SNK9 Uncharacterized protein	protein from Sus scrofa	1.0e-36
BLAST match view associations BLAST with ELAVL4 ELAVL4 ELAVL4 Uncharacterized protein	protein from Gallus gallus	2.7e-36
BLAST match view associations BLAST with elav elav elav embryonic lethal abnormal vision	protein from Drosophila melanogaster	2.7e-36
BLAST match view associations BLAST with elavl2 elavl2 elavl2 ELAV-like protein 2	protein from Xenopus laevis	1.5e-35
BLAST match view associations BLAST with LOC100515074 LOC100515074 LOC100515074 Uncharacterized protein	protein from Sus scrofa	1.9e-35
BLAST match view associations BLAST with ELAVL2 ELAVL2 ELAVL2 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 Uncharacterized protein	protein from Bos taurus	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 Uncharacterized protein	protein from Canis lupus familiaris	2.4e-35
BLAST match view associations BLAST with ELAVL3 ELAVL3 ELAVL3 ELAV-like protein 3	protein from Homo sapiens	2.4e-35
BLAST match view associations BLAST with Elavl3 Elavl3 Elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	protein from Mus musculus	2.4e-35
BLAST match view associations BLAST with Elavl3 Elavl3 Elavl3 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	gene from Rattus norvegicus	2.4e-35
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein from Mus musculus	9.5e-34
BLAST match view associations BLAST with Elavl1 Elavl1 Elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene from Rattus norvegicus	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Gallus gallus	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Bos taurus	9.5e-34
BLAST match view associations BLAST with LOC480466 LOC480466 LOC480466 Uncharacterized protein	protein from Canis lupus familiaris	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 cDNA FLJ60076, highly similar to ELAV-like protein 1	protein from Homo sapiens	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 ELAV-like protein 1	protein from Homo sapiens	9.5e-34
BLAST match view associations BLAST with ELAVL1 ELAVL1 ELAVL1 Uncharacterized protein	protein from Sus scrofa	1.5e-33
BLAST match view associations BLAST with hug hug hug HuG	gene_product from Danio rerio	2.0e-33
BLAST match view associations BLAST with elavl1-a elavl1-a elavl1-a ELAV-like protein 1-A	protein from Xenopus laevis	3.2e-33
BLAST match view associations BLAST with elavl1-b elavl1-b elavl1-b ELAV-like protein 1-B	protein from Xenopus laevis	4.1e-33
BLAST match view associations BLAST with elavl1 elavl1 elavl1 ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)	gene_product from Danio rerio	4.1e-33
BLAST match view associations BLAST with elavl1 elavl1 elavl1 ELAV-like protein 1	protein from Xenopus (Silurana) tropicalis	2.3e-32
BLAST match view associations BLAST with F1PPC3 F1PPC3 F1PPC3 Uncharacterized protein	protein from Canis lupus familiaris	3.5e-27
BLAST match view associations BLAST with exc-7 exc-7 exc-7	gene from Caenorhabditis elegans	3.0e-20
BLAST match view associations BLAST with DDB_G0290307 DDB_G0290307 DDB_G0290307 ELAVL1-like protein	gene from Dictyostelium discoideum	3.3e-14
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-12
BLAST match view associations BLAST with DDB_G0274523 DDB_G0274523 DDB_G0274523 RNA recognition motif-containing protein RRM	gene from Dictyostelium discoideum	1.6e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 cDNA FLJ42868 fis, clone BRHIP2021615, highly similar to Homo sapiens bruno-like 6, RNA binding protein, mRNA	protein from Homo sapiens	2.4e-12
BLAST match view associations BLAST with Celf6 Celf6 Celf6 CUGBP, Elav-like family member 6	protein from Mus musculus	4.9e-12
BLAST match view associations BLAST with Celf6 Celf6 Celf6 CUGBP, Elav-like family member 6	gene from Rattus norvegicus	4.9e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 CUGBP Elav-like family member 6	protein from Homo sapiens	5.3e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Bos taurus	5.4e-12
BLAST match view associations BLAST with CELF6 CELF6 CELF6 Uncharacterized protein	protein from Sus scrofa	5.4e-12
BLAST match view associations BLAST with CELF3 CELF3 CELF3 cDNA FLJ51939, highly similar to Homo sapiens trinucleotide repeat containing 4 (TNRC4), mRNA	protein from Homo sapiens	7.9e-12
BLAST match view associations BLAST with celf4 celf4 celf4 CUGBP, Elav-like family member 4	gene_product from Danio rerio	1.3e-11
BLAST match view associations BLAST with LOC100737017 LOC100737017 LOC100737017 Uncharacterized protein	protein from Sus scrofa	1.7e-11
BLAST match view associations BLAST with CELF4 CELF4 CELF4 Uncharacterized protein	protein from Gallus gallus	2.7e-11
BLAST match view associations BLAST with SF3B4 SF3B4 SF3B4 Splicing factor 3B subunit 4	protein from Homo sapiens	2.8e-11
BLAST match view associations BLAST with tnrc4-b tnrc4-b tnrc4-b CUGBP Elav-like family member 3-B	protein from Xenopus laevis	2.8e-11
BLAST match view associations BLAST with bru-3 bru-3 bru-3 bruno-3	protein from Drosophila melanogaster	3.0e-11
BLAST match view associations BLAST with celf3b celf3b celf3b cugbp, Elav-like family member 3b	gene_product from Danio rerio	3.3e-11
BLAST match view associations BLAST with LOC100851458 LOC100851458 LOC100851458 Uncharacterized protein	protein from Bos taurus	4.4e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 cDNA FLJ51739, highly similar to Homo sapiens CUG triplet repeat, RNA binding protein 2 (CUGBP2), transcript variant 2, mRNA	protein from Homo sapiens	4.6e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Bos taurus	4.7e-11
BLAST match view associations BLAST with tiar-1 tiar-1 tiar-1	gene from Caenorhabditis elegans	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Homo sapiens	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 Uncharacterized protein	protein from Sus scrofa	4.7e-11
BLAST match view associations BLAST with Celf3 Celf3 Celf3 CUGBP, Elav-like family member 3	protein from Mus musculus	4.7e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 CUGBP Elav-like family member 3	protein from Homo sapiens	4.8e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Gallus gallus	5.1e-11
BLAST match view associations BLAST with CUGBP1 CUGBP1 CUGBP1 Uncharacterized protein	protein from Bos taurus	5.1e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Homo sapiens	5.1e-11
BLAST match view associations BLAST with Celf1 Celf1 Celf1 CUGBP, Elav-like family member 1	protein from Mus musculus	5.1e-11
BLAST match view associations BLAST with Celf1 Celf1 Celf1 CUGBP, Elav-like family member 1	gene from Rattus norvegicus	5.2e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Gallus gallus	5.2e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 Uncharacterized protein	protein from Canis lupus familiaris	5.7e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUGBP Elav-like family member 1	protein from Pongo abelii	5.7e-11
BLAST match view associations BLAST with CELF1 CELF1 CELF1 CUG triplet repeat, RNA binding protein 1, isoform CRA_c	protein from Homo sapiens	5.7e-11
BLAST match view associations BLAST with tnrc4-a tnrc4-a tnrc4-a CUGBP Elav-like family member 3-A	protein from Xenopus laevis	6.0e-11
BLAST match view associations BLAST with CELF3 CELF3 CELF3 Uncharacterized protein	protein from Canis lupus familiaris	6.2e-11
BLAST match view associations BLAST with Rox8 Rox8 Rox8	protein from Drosophila melanogaster	6.2e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.6e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.6e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Gallus gallus	6.7e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 Uncharacterized protein	protein from Canis lupus familiaris	6.7e-11
BLAST match view associations BLAST with Celf3 Celf3 Celf3 CUGBP, Elav-like family member 3	gene from Rattus norvegicus	6.8e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Homo sapiens	6.9e-11
BLAST match view associations BLAST with celf2 celf2 celf2 cugbp, Elav-like family member 2	gene_product from Danio rerio	7.0e-11
BLAST match view associations BLAST with CELF2 CELF2 CELF2 CUGBP Elav-like family member 2	protein from Homo sapiens	7.1e-11