Query psy13321
Match_columns 144
No_of_seqs 144 out of 446
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 16:31:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13321.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13321hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a37_A Metallo-carboxypeptidas 99.9 1.5E-22 5E-27 172.4 4.3 74 59-136 10-83 (388)
2 3l2n_A Peptidase M14, carboxyp 99.8 1E-21 3.6E-26 167.8 5.1 72 60-136 17-88 (395)
3 3k2k_A Putative carboxypeptida 99.8 1.3E-21 4.4E-26 167.6 4.5 73 59-136 18-90 (403)
4 3l2n_A Peptidase M14, carboxyp 85.8 0.72 2.4E-05 38.9 4.2 40 6-51 255-294 (395)
5 4a37_A Metallo-carboxypeptidas 80.2 1.6 5.5E-05 36.5 4.1 39 6-50 250-288 (388)
6 3k2k_A Putative carboxypeptida 78.7 1.9 6.6E-05 36.4 4.2 41 6-52 264-304 (403)
7 1www_V Beta-NGF, protein (nerv 50.8 7.1 0.00024 28.0 1.8 36 73-109 23-58 (120)
8 1hcf_A Neurotrophin-4; transfe 49.4 9.5 0.00033 27.7 2.3 35 73-108 25-60 (130)
9 3prt_A Carboxypeptidase T; hyd 47.3 10 0.00036 30.4 2.5 34 6-39 175-208 (323)
10 1b8k_A NT3, protein (neurotrop 45.1 13 0.00043 26.6 2.4 35 73-108 22-56 (119)
11 2qvp_A Uncharacterized protein 40.0 18 0.00061 28.2 2.8 42 6-50 143-184 (275)
12 3v38_A Carboxypeptidase T; hyd 39.6 16 0.00055 29.6 2.5 35 6-40 175-209 (326)
13 1ww7_A Galectin; carbohydrate 37.4 79 0.0027 23.2 5.9 75 60-140 68-157 (160)
14 1dtd_A Carboxypeptidase A2; ca 34.8 28 0.00095 27.5 3.2 29 6-39 166-194 (303)
15 3d4u_A Tafia, carboxypeptidase 34.5 27 0.00092 27.5 3.0 29 6-38 171-199 (309)
16 3ij2_A Beta-NGF, beta-nerve gr 34.5 24 0.00082 27.9 2.6 32 73-104 126-157 (230)
17 2c1c_A Carboxypeptidase B; ins 32.5 35 0.0012 27.0 3.4 30 6-39 168-197 (312)
18 1z5r_A Procarboxypeptidase B; 31.1 33 0.0011 27.0 3.0 29 6-38 169-197 (306)
19 3fmc_A Putative succinylglutam 29.4 36 0.0012 28.0 3.1 31 6-40 147-177 (368)
20 3b2y_A Metallopeptidase contai 28.7 31 0.0011 27.1 2.4 42 6-53 140-188 (275)
21 1jqg_A Carboxypeptidase A; Pro 28.5 37 0.0013 28.5 3.0 30 6-39 281-310 (433)
22 1aye_A PCPA2, procarboxypeptid 26.9 44 0.0015 27.7 3.2 29 6-39 264-292 (401)
23 1kwm_A Procarboxypeptidase B; 25.0 47 0.0016 27.5 3.0 29 6-38 264-292 (402)
24 1h8l_A Carboxypeptidase GP180 23.8 48 0.0016 27.0 2.8 30 6-41 155-184 (380)
25 2bo9_A Carboxypeptidase A4; me 22.8 56 0.0019 25.7 3.0 28 6-38 171-198 (308)
26 1bnd_A BDNF, brain derived neu 22.3 35 0.0012 24.3 1.5 30 75-104 25-54 (119)
27 3dgv_A TAFI, carboxypeptidase 21.9 59 0.002 27.1 3.0 30 6-39 263-292 (401)
28 1uwy_A Carboxypeptidase M; met 21.7 44 0.0015 27.9 2.2 29 6-40 150-178 (426)
29 4ec7_A VNGF, venom nerve growt 20.7 29 0.001 24.4 0.8 28 77-104 25-52 (116)
No 1
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=99.85 E-value=1.5e-22 Score=172.45 Aligned_cols=74 Identities=20% Similarity=0.410 Sum_probs=67.1
Q ss_pred ccceecccCCcccCCCceeeeeeCCeeEEEEecCCCCCCCeeeeEEEEEeccCCCeeEEEEEeccCccccccccCCee
Q psy13321 59 SLVSLALPCKRWVAGNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFNFVIDNTRLDQRVILNIVNMGKTKNLFRDGMTP 136 (144)
Q Consensus 59 ~~~~l~f~~S~FesGNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFyF~V~~~~~~~~~~f~I~N~~k~~sly~~Gm~P 136 (144)
..++|.| +|+||||||.+|.++++.+|+|+|+||+++ +|+|||||+|+|.+++++|+|+|+|+.| ++|++||+|
T Consensus 10 ~~~~l~f-~s~FesGnl~~~~~~~~~~~~l~i~~D~~~-~~~qWf~F~v~~~~~~~~~~~~i~n~~~--s~y~~g~~~ 83 (388)
T 4a37_A 10 EKGAMQI-RADFDSGNIQVIDASDPRRIRLAIRPDLAS-QHFQWFHFKVEGMAPATEHCFTLVNAGQ--SAYSHAWSG 83 (388)
T ss_dssp ----CEE-ECCSTTCBCEEEECSCTTSEEEECCCCTTS-SCCCCCEEEEESCCTTCCEEEEETTGGG--STTGGGGTT
T ss_pred CCCCEEE-eccCCCCccEEEEecCCcEEEEEECCCCCC-CcceeeEEEEecCCCCeEEEEEEEeCch--hhhhccccc
Confidence 3577999 999999999999999999999999999987 8999999999999999999999999987 499999876
No 2
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=99.84 E-value=1e-21 Score=167.78 Aligned_cols=72 Identities=25% Similarity=0.507 Sum_probs=65.7
Q ss_pred cceecccCCcccCCCceeeeeeCCeeEEEEecCCCCCCCeeeeEEEEEeccCCCeeEEEEEeccCccccccccCCee
Q psy13321 60 LVSLALPCKRWVAGNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFNFVIDNTRLDQRVILNIVNMGKTKNLFRDGMTP 136 (144)
Q Consensus 60 ~~~l~f~~S~FesGNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFyF~V~~~~~~~~~~f~I~N~~k~~sly~~Gm~P 136 (144)
...+.| +|+||||||.+|.++++.||+|+|+||+++ +++|||||+|+|. ++++|+|+|+|+.| ++|++||+|
T Consensus 17 ~~~~~f-~s~FesGnl~~~~~~~~~~~~L~i~~D~~~-~~~qWF~F~v~~~-~~~~~~~~i~N~~~--s~y~~g~~~ 88 (395)
T 3l2n_A 17 FQGMRI-SANFDGGNIETISLANPDDIQLAIRPDAGG-EFYQWFNFRFEAT-IGKTYTLNILNAGG--ASYLKGWED 88 (395)
T ss_dssp ---CEE-ECCSTTCBCEEEEEEETTEEEEECCCCTTS-SCCCCCEEEEECC-TTSEEEEEETTGGG--SSCGGGGTT
T ss_pred cCCcEE-eccCCCCCceEEEecCCCEEEEEECCCCCC-CCceeEEEEEEcC-CCcEEEEEEEecch--hhhhccccc
Confidence 366899 999999999999999999999999999987 8999999999999 89999999999987 499999976
No 3
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=99.83 E-value=1.3e-21 Score=167.60 Aligned_cols=73 Identities=18% Similarity=0.333 Sum_probs=68.5
Q ss_pred ccceecccCCcccCCCceeeeeeCCeeEEEEecCCCCCCCeeeeEEEEEeccCCCeeEEEEEeccCccccccccCCee
Q psy13321 59 SLVSLALPCKRWVAGNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFNFVIDNTRLDQRVILNIVNMGKTKNLFRDGMTP 136 (144)
Q Consensus 59 ~~~~l~f~~S~FesGNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFyF~V~~~~~~~~~~f~I~N~~k~~sly~~Gm~P 136 (144)
....|.| +|+||||||.+|.++++.+|+|.|+||+++ +++|||||+|+|. ++++++|+|+|+.|+ +|++||+|
T Consensus 18 ~~~~l~f-~s~FesGnl~~~~~~~~~~~~L~i~~D~~~-~~~qWF~F~v~~~-~~~~~~~~i~N~~~s--~y~~g~~~ 90 (403)
T 3k2k_A 18 QGMTLSI-TSNFDAGAIDVVSCERADAIRLRVRGDNRS-EFAQWFYFRLTGA-RGERCVMTFENANDC--AYPAGWRD 90 (403)
T ss_dssp CSCCCEE-ECCSTTCBCEEEECSSGGGEEEECCCCTTS-SCCCCCEEEEESC-TTCCEEEEETTGGGS--SCGGGGTT
T ss_pred CCCceEE-eccCCCCCceEEEecCCCEEEEEECCCCCC-CCceeeEEEEecC-CCeEEEEEEcccchh--hhhccccc
Confidence 3578999 999999999999999999999999999987 8999999999999 899999999999874 99999876
No 4
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=85.82 E-value=0.72 Score=38.92 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=34.2
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccccCCceeeecccC
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSLKGLFIYGNSYD 51 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~g~fv~gNv~p 51 (144)
.+|...|+++++.+. .++++||+|+++....+|.+|+...
T Consensus 255 sepEt~a~~~~l~~~------~~~~~iDlHs~~~~p~~f~~g~~~~ 294 (395)
T 3l2n_A 255 RSPEVYYVVNKMHET------GVDLFYDVHGDEGLPYVFLAGCEGI 294 (395)
T ss_dssp TCHHHHHHHHHHHHH------CCSEEEEEEEESSCSSBEEECCTTS
T ss_pred CCHHHHHHHHHHHhC------CCcEEEEeccCCCCCceEeccccCC
Confidence 689999999998654 5899999999999988999887543
No 5
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=80.23 E-value=1.6 Score=36.53 Aligned_cols=39 Identities=15% Similarity=0.295 Sum_probs=33.1
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccccCCceeeeccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSLKGLFIYGNSY 50 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~g~fv~gNv~ 50 (144)
.+|...|+++++.+. .+++++|+|+++....++.+|...
T Consensus 250 s~pEt~al~~~~~~~------~~~~~iDlHs~~~~p~~~~yg~~~ 288 (388)
T 4a37_A 250 RSPEVWFVQQEMKRH------GVDLFLDIHGDEEIPHVFAAGCEG 288 (388)
T ss_dssp TCHHHHHHHHHHHHH------CCSEEEEEEEESSCSSCEEECCTT
T ss_pred cCHHHHHHHHHHHhc------CCcEEEEeccCCCCCCeEecCCcc
Confidence 689999999988654 589999999999988899887754
No 6
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=78.66 E-value=1.9 Score=36.35 Aligned_cols=41 Identities=20% Similarity=0.339 Sum_probs=34.1
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccccCCceeeecccCc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSLKGLFIYGNSYDD 52 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~g~fv~gNv~pp 52 (144)
.+|...|+++++.+. .++++||+|+++....+|.+|....|
T Consensus 264 sepEt~al~~~~~~~------~~~~~iDlHs~~~~P~~f~~g~~~~p 304 (403)
T 3k2k_A 264 RSPEVLVVRDAIHAI------GCDLFFDIHGDEDLPYVFAAGSEMLP 304 (403)
T ss_dssp TCHHHHHHHHHHHHH------CCSEEEEEEEESSCCSBEEECSTTST
T ss_pred CCHHHHHHHHHHHhc------CCcEEEEeccCCCCCCccccCcccCC
Confidence 689999999988654 58999999999998889998876533
No 7
>1www_V Beta-NGF, protein (nerve growth factor); complex, cysteine knot, immunoglobulin like domain; 2.20A {Homo sapiens} SCOP: g.17.1.3 PDB: 1sg1_A 2ifg_E* 1sgf_B* 1btg_A 1bet_A
Probab=50.84 E-value=7.1 Score=27.99 Aligned_cols=36 Identities=11% Similarity=0.012 Sum_probs=28.7
Q ss_pred CCceeeeeeCCeeEEEEecCCCCCCCeeeeEEEEEec
Q psy13321 73 GNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFNFVIDN 109 (144)
Q Consensus 73 GNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFyF~V~~ 109 (144)
+|...+.-+.+.+..++-..+.++..+.|||| .++.
T Consensus 23 ~nkttA~Di~G~~VtVl~~v~~n~~~~kQyF~-ET~C 58 (120)
T 1www_V 23 GDKTTATDIKGKEVMVLGEVNINNSVFKQYFF-ETKC 58 (120)
T ss_dssp CCCCEEEBTTSCEEEECSEEESSSSEEECCEE-EEEE
T ss_pred cCCCEEEccCCCEEEEEEEEecCCceEEEEEE-EEEe
Confidence 47777878888889988888888889999986 4543
No 8
>1hcf_A Neurotrophin-4; transferase/hormone, complex(transferase/growth factor), neurotrophin-4/5, TRKB receptor, NGF-beta superfamily; 2.7A {Homo sapiens} SCOP: g.17.1.3 PDB: 1b98_A 1b8m_B
Probab=49.37 E-value=9.5 Score=27.69 Aligned_cols=35 Identities=9% Similarity=-0.068 Sum_probs=26.6
Q ss_pred CCceeeeeeCCeeEEEEecC-CCCCCCeeeeEEEEEe
Q psy13321 73 GNLGRVDFTSEFEYDLFIRP-DTCNPRHRLWFNFVID 108 (144)
Q Consensus 73 GNL~~v~~~~~~ey~L~l~p-D~~t~~~~qWFyF~V~ 108 (144)
+|+..+.-+.+++-.+.-.- +.++..+.|||| ..+
T Consensus 25 ~nkttA~Di~G~~VtVL~~v~~~nn~~~kQyF~-ET~ 60 (130)
T 1hcf_A 25 TDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFF-ETR 60 (130)
T ss_dssp CCCCEEEBTTSCEEEECSEEECSSSSEEECCEE-EEE
T ss_pred ccccEEEecCCCEEEEeeeeecCCCcceEEEEE-EEE
Confidence 47777877888888777666 888779999986 444
No 9
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A
Probab=47.27 E-value=10 Score=30.37 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=24.6
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
-+|.-.|+++++.+...+....++++||+|+++.
T Consensus 175 sepEt~a~~~~~~~~~~~~~~~~~~~idlHs~~~ 208 (323)
T 3prt_A 175 SAPETAAMRDFINSRVVGGKQQIKTLITFHTYSE 208 (323)
T ss_dssp CSHHHHHHHHHHHHTEETTEECEEEEEEEEESSS
T ss_pred CcHHHHHHHHHHHHhhhccccCeEEEEEccCCCc
Confidence 5677888888886652222347999999998775
No 10
>1b8k_A NT3, protein (neurotrophin-3); complex (growth factor/growth factor), hormone/growth factor complex; 2.15A {Homo sapiens} SCOP: g.17.1.3 PDB: 1nt3_A 3buk_A* 1bnd_B
Probab=45.06 E-value=13 Score=26.62 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=21.0
Q ss_pred CCceeeeeeCCeeEEEEecCCCCCCCeeeeEEEEEe
Q psy13321 73 GNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFNFVID 108 (144)
Q Consensus 73 GNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFyF~V~ 108 (144)
+|...+.-+.+++..+.-.-..++..+.|||| ..+
T Consensus 22 ~~kt~a~Di~G~~VtVl~~v~~~~~~~kQyF~-ET~ 56 (119)
T 1b8k_A 22 TDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFY-ETR 56 (119)
T ss_dssp CCCCEEEBTTSCEEEECSBC------CBCCEE-EEE
T ss_pred ccCCEEEecCCCEEEEEEEEEcCCCceEEEEE-EEE
Confidence 35666666777888887777788878999986 444
No 11
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}
Probab=39.96 E-value=18 Score=28.19 Aligned_cols=42 Identities=14% Similarity=0.078 Sum_probs=30.2
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccccCCceeeeccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSLKGLFIYGNSY 50 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~g~fv~gNv~ 50 (144)
.+|...|+++++..+. +..++++||+|+.+...+-+++....
T Consensus 143 ~~pE~~a~~~~~~~~~---~~~~~~~idlHs~~~~~~~~~~~~~~ 184 (275)
T 2qvp_A 143 TSAEGRILLEHAHLLQ---VASRDGILTCHEDVLMTDTYVYTFEP 184 (275)
T ss_dssp CCHHHHHHHHTHHHHH---HHTTTCEEEEEEETTCSSBEEEEECS
T ss_pred CcHHHHHHHHHHHHhc---cCCceEEEEecCCCCCCCeEEecCCC
Confidence 5777888888876553 23689999999887766666665443
No 12
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A
Probab=39.65 E-value=16 Score=29.63 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=25.6
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSL 40 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~ 40 (144)
-+|.-.|+++++.+...+....++++||+|+.+.+
T Consensus 175 sEpEt~av~~~i~~~~~~~~~~~~~~i~~Hs~~~~ 209 (326)
T 3v38_A 175 SAPETAAMRDFINSRVVGGKQQIKTLITFHTYSEL 209 (326)
T ss_dssp CSHHHHHHHHHHHHTEETTEECEEEEEEEEESSSE
T ss_pred ccHHHHHHHHHHHhhccccccCeEEEEEecCCCCE
Confidence 57888899998876533334589999999985433
No 13
>1ww7_A Galectin; carbohydrate recognition domain,X-RAY crystallographic analysis, sulfate ION, sugar binding protein; 1.90A {Agrocybe cylindracea} PDB: 1ww4_A* 1ww6_A* 1ww5_A 2zgl_A 2zgm_A* 2zgn_A* 3afk_A* 3m3c_A* 3m3q_A* 2zgk_A 2zgs_A 2zgq_A 2zgr_A 3m3e_A* 2zgo_A* 3m3o_A* 2zgp_A 2zgu_A 2zgt_A
Probab=37.44 E-value=79 Score=23.18 Aligned_cols=75 Identities=9% Similarity=-0.021 Sum_probs=47.6
Q ss_pred cceecccCCcccCCCceeeeeeC---------CeeEEEEecCCCCC------CCeeeeEEEEEeccCCCeeEEEEEeccC
Q psy13321 60 LVSLALPCKRWVAGNLGRVDFTS---------EFEYDLFIRPDTCN------PRHRLWFNFVIDNTRLDQRVILNIVNMG 124 (144)
Q Consensus 60 ~~~l~f~~S~FesGNL~~v~~~~---------~~ey~L~l~pD~~t------~~~~qWFyF~V~~~~~~~~~~f~I~N~~ 124 (144)
.+.+++ +|.+..|.+..-++.. +..++|.|..+... ..+...|-.|+... +..+.+.+ |
T Consensus 68 e~~VV~-NS~~~~g~WG~EER~~~~~~PF~~~G~~F~i~I~~~~~~f~V~vNg~~~~~F~hR~~~~--~~~i~y~~-~-- 141 (160)
T 1ww7_A 68 ENVIVF-NSRQPNAPWLVEQRVSNVANQFIGSGGKAMVTVFDHGDKYQVVINEKTVIQYTKQISGT--TSSLSYNS-T-- 141 (160)
T ss_dssp TTEEEE-EEECTTSCCCCCEEEECHHHHTTTCSSCEEEEEEECSSEEEEEETTEEEEEEECSSCCC--EEEEEEEE-E--
T ss_pred CCEEEE-CCcccCCeecccEEccCCCCCcccCCCCEEEEEEEeCCEEEEEECCEEEEEecCcCCCC--cccEEEEe-c--
Confidence 567888 8876788888777753 45667776655432 24555555555432 36677766 4
Q ss_pred ccccccccCCeeEEEe
Q psy13321 125 KTKNLFRDGMTPLEET 140 (144)
Q Consensus 125 k~~sly~~Gm~P~~~S 140 (144)
.+.+.|++-.+..+|.
T Consensus 142 ~~~~~~s~~~~v~~~~ 157 (160)
T 1ww7_A 142 EGTSIFSTVVEAVTYT 157 (160)
T ss_dssp ESSCSSCSEEEEEEEE
T ss_pred CCccccccceEEEEee
Confidence 5666888877766663
No 14
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1
Probab=34.77 E-value=28 Score=27.46 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=22.1
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
.+|...|+++++.+. ..+++++|+|+++.
T Consensus 166 sepEt~a~~~~~~~~-----~~~~~~idlHs~~~ 194 (303)
T 1dtd_A 166 SEVEVKSIVDFIKSH-----GKVKAFIILHSYSQ 194 (303)
T ss_dssp CSHHHHHHHHHHHHH-----CCEEEEEEEEESSC
T ss_pred CcHHHHHHHHHHHhC-----CCeEEEEEeeCCCC
Confidence 566677888887554 37999999998774
No 15
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=34.53 E-value=27 Score=27.54 Aligned_cols=29 Identities=14% Similarity=0.259 Sum_probs=21.6
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHS 38 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S 38 (144)
.+|...|+++++.+.. .++++++|+|+.+
T Consensus 171 sepEt~a~~~~~~~~~----~~~~~~idlH~~~ 199 (309)
T 3d4u_A 171 SEPEVKAVADFLRRNI----KHIKAYISMHSYS 199 (309)
T ss_dssp CSHHHHHHHHHHHHTT----TTEEEEEEEEESS
T ss_pred CcHHHHHHHHHHHhcc----cceEEEEEEeCCC
Confidence 4566777777775542 3699999999885
No 16
>3ij2_A Beta-NGF, beta-nerve growth factor; receptor and ligand, cleavage on PAIR of basic residues; 3.75A {Mus musculus}
Probab=34.51 E-value=24 Score=27.87 Aligned_cols=32 Identities=16% Similarity=0.143 Sum_probs=25.1
Q ss_pred CCceeeeeeCCeeEEEEecCCCCCCCeeeeEE
Q psy13321 73 GNLGRVDFTSEFEYDLFIRPDTCNPRHRLWFN 104 (144)
Q Consensus 73 GNL~~v~~~~~~ey~L~l~pD~~t~~~~qWFy 104 (144)
+|...+.-+.+++..+.-.-..++..+.||||
T Consensus 126 ~nKttA~Di~G~~VtVL~ev~~n~~~~kQyFy 157 (230)
T 3ij2_A 126 GDKTTATDIKGKEVTVLAEVNINNSVFRQYFF 157 (230)
T ss_dssp CCCCEEEBTTSCEEEECCCCCTTSCCCCCCCE
T ss_pred ccCCeeeecCCCEEEEEEEEecCCcceeEEEE
Confidence 46666666677888888877888889999987
No 17
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=32.53 E-value=35 Score=26.97 Aligned_cols=30 Identities=7% Similarity=0.164 Sum_probs=22.6
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
.+|...|+++++.+.. ..++++||+|+.+.
T Consensus 168 sepEt~al~~~~~~~~----~~~~~~idlHs~~~ 197 (312)
T 2c1c_A 168 SEVETRVVRDILHEHL----ARMALYLTMHSFGS 197 (312)
T ss_dssp CSHHHHHHHHHHHHHG----GGEEEEEEEEESSS
T ss_pred CCHHHHHHHHHHHhcc----CCeeEEEEEecCCC
Confidence 5666778888886653 27999999998863
No 18
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...
Probab=31.10 E-value=33 Score=27.01 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=21.7
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHS 38 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S 38 (144)
.+|...|+++++.+.. ..+++++|+|+.+
T Consensus 169 sepEt~a~~~~~~~~~----~~~~~~idlHs~~ 197 (306)
T 1z5r_A 169 SEKETKALADFIRNNL----SSIKAYLTIHSYS 197 (306)
T ss_dssp CSHHHHHHHHHHHHTT----TTEEEEEEEEESS
T ss_pred CcHHHHHHHHHHHHhc----cCeEEEEEEeCCC
Confidence 5666777777775542 3799999999885
No 19
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=29.44 E-value=36 Score=28.00 Aligned_cols=31 Identities=19% Similarity=0.288 Sum_probs=23.8
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSL 40 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~ 40 (144)
..++..+.+..|+++-. +.|++||+|+.+..
T Consensus 147 s~~~~~~~~~~l~~l~~----~aD~~iDLHs~~~~ 177 (368)
T 3fmc_A 147 GVTTGHRLAVTLQSMAH----RADIVLDLHTGPKS 177 (368)
T ss_dssp CCCHHHHHHHHHHHHHH----TCSEEEEEEEESEE
T ss_pred CccHHHHHHHHHHHHhc----cCCEEEEeccCCcc
Confidence 46677777777777755 68999999988874
No 20
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*
Probab=28.71 E-value=31 Score=27.11 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=27.8
Q ss_pred CCCch-------HHHHHHHHHhhhCCCcceeEEEeeccccccCCceeeecccCcc
Q psy13321 6 GNPGI-------STALTLITSLNQDKNLELDFIIDLHAHSSLKGLFIYGNSYDDI 53 (144)
Q Consensus 6 ~~p~l-------~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~g~fv~gNv~pp~ 53 (144)
.+|.- .|+++++.+ ..+++++|+|+.....+-+.+++...+.
T Consensus 140 sepEt~~l~~~~~a~~~~~~~------~~~~~~id~H~~~~~~g~y~~~~~~~~~ 188 (275)
T 3b2y_A 140 PNEHTSLEGKLLLEHAQLLCA------ASRDGILTCHEDVLMNETYVYSFEPTQT 188 (275)
T ss_dssp ---CCCHHHHHHHTTHHHHHH------HTTTEEEEEEEETTCSSBEEEEECSSSS
T ss_pred CCCCccccchHHHHHHHHHHh------cCCcEEEECCCCCcCCeEEecCCCCCCC
Confidence 46666 777777743 4789999999986556677777665443
No 21
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1
Probab=28.52 E-value=37 Score=28.50 Aligned_cols=30 Identities=20% Similarity=0.364 Sum_probs=23.3
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
.+|...|+++++.+.. ..+++++|+|+++.
T Consensus 281 sepEt~al~~~~~~~~----~~~~~~idlHs~~~ 310 (433)
T 1jqg_A 281 SEPESSVIRDIIAEHR----NRMALYLDIHSFGS 310 (433)
T ss_dssp CSHHHHHHHHHHHHTT----TTEEEEEEEEESSS
T ss_pred ccHHHHHHHHHHHHhc----CCeEEEEEEcCCCC
Confidence 5677788888886652 47999999998774
No 22
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A
Probab=26.90 E-value=44 Score=27.71 Aligned_cols=29 Identities=21% Similarity=0.233 Sum_probs=22.1
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
.+|.-.|+++++.+. ..++++||+|+.+.
T Consensus 264 sepEt~al~~~~~~~-----~~~~~~idlHs~~~ 292 (401)
T 1aye_A 264 SEVEVKSIVDFIKSH-----GKVKAFIILHSYSQ 292 (401)
T ss_dssp CSHHHHHHHHHHHHH-----CCEEEEEEEEESSC
T ss_pred cCHHHHHHHHHHHcc-----CCEEEEEEEcCCCC
Confidence 456677888887554 37999999998874
No 23
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Probab=25.02 E-value=47 Score=27.47 Aligned_cols=29 Identities=10% Similarity=0.120 Sum_probs=21.9
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHS 38 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S 38 (144)
.+|...|+++++.+.. ..++++||+|+.+
T Consensus 264 sepEt~al~~~~~~~~----~~~~~~idlHs~~ 292 (402)
T 1kwm_A 264 SEKETKALADFIRNKL----SSIKAYLTIHSYS 292 (402)
T ss_dssp CSHHHHHHHHHHHHTT----TTEEEEEEEEESS
T ss_pred CcHHHHHHHHHHHhhc----cCeeEEEEEeCCC
Confidence 4567777777776552 3699999999886
No 24
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=23.78 E-value=48 Score=27.01 Aligned_cols=30 Identities=13% Similarity=0.239 Sum_probs=22.0
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccccC
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSLK 41 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~~ 41 (144)
.+|...|+++++.+. ..+++||+|+++.+.
T Consensus 155 sepEt~a~~~~~~~~------~~~~~idlH~~~~~~ 184 (380)
T 1h8l_A 155 PQPETLAVMSWLKTY------PFVLSANLHGGSLVV 184 (380)
T ss_dssp CCHHHHHHHHHHHHS------CEEEEEEEECSEEEE
T ss_pred CChHHHHHHHHHHhC------CceEEEEEecCCEEE
Confidence 366777777777543 689999999887653
No 25
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=22.83 E-value=56 Score=25.68 Aligned_cols=28 Identities=21% Similarity=0.301 Sum_probs=20.5
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHS 38 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S 38 (144)
.+|...|+++++ +. ..++++++|+|+.+
T Consensus 171 sepEt~a~~~~~-~~----~~~~~~~idlHs~~ 198 (308)
T 2bo9_A 171 SEVEVKSVVDFI-QK----HGNFKGFIDLHSYS 198 (308)
T ss_dssp CSHHHHHHHHHH-HH----HCCEEEEEEEEESS
T ss_pred CCHHHHHHHHHH-Hh----CCCeEEEEEEecCC
Confidence 466677777777 43 23699999999886
No 26
>1bnd_A BDNF, brain derived neurotrophic factor; complex (growth factor-growth factor) complex; 2.30A {Homo sapiens} SCOP: g.17.1.3 PDB: 1b8m_A
Probab=22.29 E-value=35 Score=24.29 Aligned_cols=30 Identities=7% Similarity=-0.056 Sum_probs=19.0
Q ss_pred ceeeeeeCCeeEEEEecCCCCCCCeeeeEE
Q psy13321 75 LGRVDFTSEFEYDLFIRPDTCNPRHRLWFN 104 (144)
Q Consensus 75 L~~v~~~~~~ey~L~l~pD~~t~~~~qWFy 104 (144)
...+.-+.+++-.+.-.--.++..+.||||
T Consensus 25 kttA~Di~G~~VtVl~~v~~~n~~~kQyF~ 54 (119)
T 1bnd_A 25 KKTAVDMSGGTVTVLEKVPVSKGQLKQYFY 54 (119)
T ss_dssp HCEEEBTTSCEEEECSEEECSSSEEECEEE
T ss_pred cCEEEecCCCEEEEEEEEecCCCceEEEEE
Confidence 345555566666666555555668999886
No 27
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*
Probab=21.86 E-value=59 Score=27.12 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=24.0
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeeccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSS 39 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~ 39 (144)
-+|.-.|+++++.+.. ..+.++||+|+.+.
T Consensus 263 sepEt~al~~~i~~~~----~~~~~~i~lHs~~~ 292 (401)
T 3dgv_A 263 SEPEVKAVADFLRRNI----KHIKAYISMHSYSQ 292 (401)
T ss_dssp CSHHHHHHHHHHHHTT----TTEEEEEEEEESSC
T ss_pred cCHHHHHHHHHHHHhC----cCceEEEEEecCCC
Confidence 5788888888886652 47999999998875
No 28
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=21.72 E-value=44 Score=27.87 Aligned_cols=29 Identities=10% Similarity=0.231 Sum_probs=22.8
Q ss_pred CCCchHHHHHHHHHhhhCCCcceeEEEeecccccc
Q psy13321 6 GNPGISTALTLITSLNQDKNLELDFIIDLHAHSSL 40 (144)
Q Consensus 6 ~~p~l~~~~~~~~~~~~~~~~~l~f~~d~ha~S~~ 40 (144)
.+|...|+++++.+. ..++++|+|+++..
T Consensus 150 sepEt~al~~~~~~~------~~~~~idlHs~~~~ 178 (426)
T 1uwy_A 150 RQPETVAVMKWLKTE------TFVLSANLHGGALV 178 (426)
T ss_dssp CCHHHHHHHHHHHHS------CEEECCEEECSEEE
T ss_pred ccHHHHHHHHHHhcc------CeEEEEEEcCCCeE
Confidence 677778888877554 78999999988764
No 29
>4ec7_A VNGF, venom nerve growth factor; cobra NGF, unknown lipid, hormone; HET: L44; 2.60A {Naja atra}
Probab=20.69 E-value=29 Score=24.39 Aligned_cols=28 Identities=7% Similarity=-0.073 Sum_probs=19.3
Q ss_pred eeeeeCCeeEEEEecCCCCCCCeeeeEE
Q psy13321 77 RVDFTSEFEYDLFIRPDTCNPRHRLWFN 104 (144)
Q Consensus 77 ~v~~~~~~ey~L~l~pD~~t~~~~qWFy 104 (144)
.+.-+.+++-.+.-..+.++..++||||
T Consensus 25 ~A~di~G~~V~vl~~v~~~~~~~kQyF~ 52 (116)
T 4ec7_A 25 TATDIKGNTVTVMENVNLDNKVYKEYFF 52 (116)
T ss_dssp EEEBTTSCEEEECSEEEETTEEEECCEE
T ss_pred ccEecCCCEEEEEEEEecCCceEEEEEE
Confidence 4444556667776666777778889886
Done!