Query psy13327
Match_columns 154
No_of_seqs 102 out of 119
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 16:40:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13327.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13327hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3grl_A General vesicular trans 100.0 1.6E-42 5.5E-47 318.2 15.8 146 7-152 266-411 (651)
2 1xqr_A HSPBP1 protein; armadil 97.3 0.0019 6.5E-08 53.4 10.9 96 40-146 112-207 (296)
3 4db6_A Armadillo repeat protei 96.5 0.057 1.9E-06 39.8 11.6 93 41-145 43-135 (210)
4 1xqr_A HSPBP1 protein; armadil 96.4 0.026 8.9E-07 46.5 10.5 107 22-146 58-165 (296)
5 4hxt_A De novo protein OR329; 96.3 0.11 3.8E-06 38.6 12.8 105 24-146 22-126 (252)
6 4hxt_A De novo protein OR329; 96.2 0.067 2.3E-06 39.9 10.7 94 40-145 116-209 (252)
7 4db8_A Armadillo-repeat protei 95.8 0.18 6.3E-06 38.0 11.9 91 44-146 130-220 (252)
8 4db6_A Armadillo repeat protei 95.6 0.17 5.9E-06 37.1 10.6 94 41-146 85-178 (210)
9 4db8_A Armadillo-repeat protei 94.8 0.4 1.4E-05 36.0 10.9 91 42-144 44-134 (252)
10 2jdq_A Importin alpha-1 subuni 93.4 0.31 1.1E-05 39.5 8.1 85 42-137 97-181 (450)
11 2jdq_A Importin alpha-1 subuni 92.5 1.6 5.5E-05 35.3 11.1 89 44-144 268-357 (450)
12 1jdh_A Beta-catenin; beta-cate 92.3 0.99 3.4E-05 37.5 9.8 93 42-146 91-183 (529)
13 4b8j_A Importin subunit alpha- 92.2 1.7 5.8E-05 36.6 11.3 92 44-146 278-369 (528)
14 4b8j_A Importin subunit alpha- 91.8 0.81 2.8E-05 38.6 8.9 87 41-138 149-235 (528)
15 1wa5_B Importin alpha subunit; 91.6 2.7 9.3E-05 35.5 12.0 108 23-146 106-213 (530)
16 1jdh_A Beta-catenin; beta-cate 90.9 1.2 4E-05 37.0 8.8 94 42-145 298-394 (529)
17 3grl_A General vesicular trans 90.8 4.4 0.00015 37.4 13.2 128 19-149 308-463 (651)
18 1wa5_B Importin alpha subunit; 90.6 1.4 4.7E-05 37.4 9.1 85 41-137 162-246 (530)
19 2z6h_A Catenin beta-1, beta-ca 90.4 1.6 5.6E-05 38.2 9.7 93 42-146 88-180 (644)
20 3nmw_A APC variant protein; AR 90.0 1.2 4.2E-05 37.2 8.2 90 41-142 252-341 (354)
21 3tpo_A Importin subunit alpha- 87.9 11 0.00039 32.0 13.0 108 23-146 95-202 (529)
22 3ul1_B Importin subunit alpha- 87.3 12 0.00043 31.8 12.9 108 23-146 76-183 (510)
23 2z6g_A B-catenin; FULL-length, 86.7 3.8 0.00013 37.3 9.8 93 42-146 224-316 (780)
24 3nmz_A APC variant protein; pr 85.5 3.8 0.00013 35.7 8.8 87 41-139 368-454 (458)
25 3nmw_A APC variant protein; AR 85.0 13 0.00043 31.0 11.5 96 42-146 160-261 (354)
26 2z6g_A B-catenin; FULL-length, 84.7 2.2 7.4E-05 39.0 7.1 94 42-145 431-527 (780)
27 3nmz_A APC variant protein; pr 84.2 15 0.00052 31.8 12.0 96 42-146 276-377 (458)
28 3ul1_B Importin subunit alpha- 84.2 7.7 0.00026 33.1 10.0 56 40-97 131-186 (510)
29 2z6h_A Catenin beta-1, beta-ca 83.2 4.5 0.00015 35.4 8.3 93 42-144 295-390 (644)
30 2xoa_A Ryanodine receptor 1; m 83.2 1.4 4.7E-05 39.7 5.1 54 42-95 472-543 (559)
31 3tpo_A Importin subunit alpha- 82.7 11 0.00037 32.2 10.3 81 15-97 112-205 (529)
32 1xm9_A Plakophilin 1; armadill 81.5 2.1 7.3E-05 36.2 5.4 96 45-147 276-371 (457)
33 3now_A UNC-45 protein, SD10334 78.2 11 0.00039 35.3 9.6 93 42-146 613-705 (810)
34 1xm9_A Plakophilin 1; armadill 78.0 20 0.00068 30.1 10.4 92 43-146 35-126 (457)
35 3l6x_A Catenin delta-1; cateni 77.9 12 0.00043 33.6 9.5 93 42-145 386-485 (584)
36 3now_A UNC-45 protein, SD10334 73.1 62 0.0021 30.3 13.5 93 42-145 654-747 (810)
37 3tt9_A Plakophilin-2; cell adh 66.8 45 0.0015 26.2 10.2 93 42-146 42-134 (233)
38 1ibr_B P95, importin beta-1 su 59.6 42 0.0014 26.7 8.1 60 24-85 3-68 (462)
39 1ibr_B P95, importin beta-1 su 58.2 7 0.00024 31.4 3.2 65 65-139 377-441 (462)
40 3l6x_A Catenin delta-1; cateni 58.0 71 0.0024 28.7 10.0 95 41-147 79-174 (584)
41 4fdd_A Transportin-1; heat rep 58.0 46 0.0016 29.7 8.8 38 51-88 710-747 (852)
42 1n4k_A Inositol 1,4,5-trisphos 54.9 72 0.0025 27.0 9.1 24 41-64 280-303 (381)
43 1u6g_C TIP120 protein, CAND1; 52.9 57 0.0019 30.5 8.8 70 52-137 48-117 (1230)
44 3tt9_A Plakophilin-2; cell adh 49.3 93 0.0032 24.3 9.1 82 55-146 11-92 (233)
45 2qk2_A LP04448P; mini spindles 43.3 34 0.0012 25.6 4.8 61 65-135 26-86 (242)
46 2qk2_A LP04448P; mini spindles 39.9 1.1E+02 0.0039 22.6 8.5 32 52-84 56-87 (242)
47 1qgr_A Protein (importin beta 37.7 1E+02 0.0036 26.9 7.6 78 53-139 173-250 (876)
48 3ltm_A Alpha-REP4; protein eng 37.4 1.1E+02 0.0038 21.8 8.1 14 68-81 95-108 (211)
49 4gmo_A Putative uncharacterize 34.9 2.4E+02 0.0083 25.0 9.7 95 45-146 112-225 (684)
50 2bpt_A Importin beta-1 subunit 31.6 53 0.0018 28.7 4.7 78 53-139 180-257 (861)
51 2qk1_A Protein STU2; STU2P, XM 30.7 19 0.00065 28.0 1.5 62 66-135 28-90 (249)
52 3uj4_A Inositol 1,4,5-trisphos 28.8 1.6E+02 0.0056 26.6 7.5 47 21-67 473-529 (604)
53 3tjz_B Coatomer subunit gamma; 25.7 2.1E+02 0.0073 23.8 7.3 42 106-148 140-181 (355)
54 3opb_A SWI5-dependent HO expre 24.9 2.2E+02 0.0074 26.7 7.7 110 20-140 576-688 (778)
55 2bpt_A Importin beta-1 subunit 24.8 2.1E+02 0.0073 24.8 7.3 61 67-137 652-713 (861)
56 3gae_A Protein DOA1; UFD3, CDC 23.8 1.1E+02 0.0038 24.2 5.0 56 12-86 67-122 (253)
57 3qml_C Protein SLS1, nucleotid 23.7 1.2E+02 0.004 25.6 5.2 41 55-95 71-111 (315)
58 2vgl_B AP-2 complex subunit be 23.1 1.5E+02 0.0052 25.5 6.0 35 52-88 390-424 (591)
59 4gmo_A Putative uncharacterize 20.4 4.5E+02 0.015 23.2 9.8 84 43-134 173-257 (684)
No 1
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=100.00 E-value=1.6e-42 Score=318.18 Aligned_cols=146 Identities=56% Similarity=0.974 Sum_probs=141.7
Q ss_pred CCccccchHHHHHHHHHHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCH
Q psy13327 7 CESEEGWSAQRESNILALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNH 86 (154)
Q Consensus 7 ~~e~~~W~~Qk~~Ni~~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~ 86 (154)
+++++.|++||++|++++|+|||+||+|+++.++++.||++|+++|+++.||+++|++++|.+||++||+|+||+||||+
T Consensus 266 ~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~ 345 (651)
T 3grl_A 266 GDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQ 345 (651)
T ss_dssp CSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCH
Confidence 55678999999999999999999999999876679999999999999999999999999999999999999999999999
Q ss_pred HhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHHHhcCCC
Q psy13327 87 ENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIATLLPSA 152 (154)
Q Consensus 87 ~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~Tllp~~ 152 (154)
.+|++|++++||++|++|+++++|++|++++|+|++|+||+|||||||++|+++|.++++|++|++
T Consensus 346 ~~Q~~fa~~~vp~~~~~p~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~~~N~~~Q~~i~~~llp~~ 411 (651)
T 3grl_A 346 VNQDYFASVNAPSNPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPST 411 (651)
T ss_dssp HHHHHHHHCEESSSSCEEHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTSSCC
T ss_pred HHHHHHhhccCCCCCCcChHHHHHHHHhcccccHHHHHHHHHHHHHHHhCCHHHHHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999987
No 2
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.34 E-value=0.0019 Score=53.38 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=76.1
Q ss_pred cchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCc
Q psy13327 40 VVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQS 119 (154)
Q Consensus 40 ~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~ 119 (154)
+.+.+|..+.++|.+..|+++.-+ ..+..+|.+|+.+++.++||++..++.|.+.. .-| .|..++.+. .
T Consensus 112 ~n~~~~~~vv~~g~l~~Ll~LL~~-~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~g-----gi~----~L~~lL~~~-d 180 (296)
T 1xqr_A 112 NVAAIQEQVLGLGALRKLLRLLDR-DACDTVRVKALFAISCLVREQEAGLLQFLRLD-----GFS----VLMRAMQQQ-V 180 (296)
T ss_dssp TCHHHHHHHHHTTHHHHHHHHHHH-CSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-----HHH----HHHHHHHSS-C
T ss_pred CCHHHHHHHHHCCCHHHHHHHHcc-CCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCC-----CHH----HHHHHHcCC-C
Confidence 457899999999999999999864 34578999999999999999999999887631 122 333344443 7
Q ss_pred chhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 120 YPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 120 f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+++|..|+.++.....++++.+..+++
T Consensus 181 ~~v~~~A~~aLs~L~~~~~~~~~~vv~ 207 (296)
T 1xqr_A 181 QKLKVKSAFLLQNLLVGHPEHKGTLCS 207 (296)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 899999999999888888888777765
No 3
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=96.46 E-value=0.057 Score=39.81 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=72.4
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
...++..+.+.|.+..++++.-++ ...+|..|+.+++.+..+++.+++.+.+-.+ -| .|+.++.+. ..
T Consensus 43 ~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~-----i~----~L~~lL~~~-~~ 110 (210)
T 4db6_A 43 GNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGA-----LP----ALVQLLSSP-NE 110 (210)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC-----HH----HHHHHTTCS-CH
T ss_pred CHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCcHHHHHHHHCCC-----HH----HHHHHHcCC-cH
Confidence 456788999999999999998765 6789999999999999999999888765433 22 234444443 46
Q ss_pred hhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 121 PLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
++|..|+.++.....++++.+..++
T Consensus 111 ~v~~~a~~~L~~l~~~~~~~~~~~~ 135 (210)
T 4db6_A 111 QILQEALWALSNIASGGNEQIQAVI 135 (210)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 8899999999998888887765554
No 4
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=96.44 E-value=0.026 Score=46.51 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=79.2
Q ss_pred HHHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHH-HhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCC
Q psy13327 22 LALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCN-LLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSD 100 (154)
Q Consensus 22 ~~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~-Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~ 100 (154)
..+|+.+.-|+... .|...|.+.|.+..++. +.-+ -...||..|..++|.+..+|+.+|+.+-+-.+
T Consensus 58 ~~Al~~L~~lv~~~-------dna~~~~~~G~l~~Lv~~lL~s--~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~--- 125 (296)
T 1xqr_A 58 EGALELLADLCENM-------DNAADFCQLSGMHLLVGRYLEA--GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGA--- 125 (296)
T ss_dssp HHHHHHHHHHHTSH-------HHHHHHHHTTHHHHHHHTTTTC--SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH---
T ss_pred HHHHHHHHHHHhCh-------hhHHHHHHcCCHHHHHHHHHcC--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCC---
Confidence 44556665555522 37778899999999988 7543 35689999999999999999999998875432
Q ss_pred CChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 101 PPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 101 p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
-|.++-+ +.+...-.+|..|++++-+...+|+..+..|++
T Consensus 126 --l~~Ll~L----L~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~ 165 (296)
T 1xqr_A 126 --LRKLLRL----LDRDACDTVRVKALFAISCLVREQEAGLLQFLR 165 (296)
T ss_dssp --HHHHHHH----HHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred --HHHHHHH----HccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 3334333 332224578999999999999999998887765
No 5
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.35 E-value=0.11 Score=38.65 Aligned_cols=105 Identities=11% Similarity=0.130 Sum_probs=80.4
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCCh
Q psy13327 24 LLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPR 103 (154)
Q Consensus 24 ~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~ 103 (154)
++..++-+.... +.+...+.+.|.+..++++.-++. ..+|..|+.+++.+..+++.+++.+.+..+
T Consensus 22 a~~~L~~l~~~~------~~~~~~~~~~g~i~~L~~ll~~~~--~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~------ 87 (252)
T 4hxt_A 22 AARDLAEIASGP------ASAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAGG------ 87 (252)
T ss_dssp HHHHHHHHHTSC------HHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTTH------
T ss_pred HHHHHHHHhcCC------cHHHHHHHHCCCHHHHHHHHhCCC--HHHHHHHHHHHHHHHcCChHHHHHHHHCCC------
Confidence 444555554443 368889999999999999987654 899999999999999999999998875432
Q ss_pred HHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 104 QAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 104 p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+-.|+.++.+ ..-++|..|+.++.....++++.+..+++
T Consensus 88 ---i~~l~~ll~~-~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 126 (252)
T 4hxt_A 88 ---VEVLVKLLTS-TDSEVQKEAARALANIASGPDEAIKAIVD 126 (252)
T ss_dssp ---HHHHHHHTTC-SSHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred ---HHHHHHHHcC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 2334455544 35688999999999999888888876654
No 6
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=96.17 E-value=0.067 Score=39.88 Aligned_cols=94 Identities=12% Similarity=0.088 Sum_probs=72.6
Q ss_pred cchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCc
Q psy13327 40 VVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQS 119 (154)
Q Consensus 40 ~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~ 119 (154)
..+.++..+.+.|.+..++++.-+.. ..++..|+.+++.+.++++.+.+.+.+-. .+-.|+.++.+. .
T Consensus 116 ~~~~~~~~~~~~~~i~~L~~~l~~~~--~~~~~~a~~~L~~l~~~~~~~~~~~~~~~---------~i~~L~~ll~~~-~ 183 (252)
T 4hxt_A 116 GPDEAIKAIVDAGGVEVLVKLLTSTD--SEVQKEAARALANIASGPDEAIKAIVDAG---------GVEVLVKLLTST-D 183 (252)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTT---------HHHHHHHHTTCS-C
T ss_pred CCHHHHHHHHHCCCHHHHHHHHcCCC--HHHHHHHHHHHHHHHcCCHHHHHHHHHCc---------CHHHHHHHHCCC-C
Confidence 34678888999999999999887544 78999999999999999998877665422 233345555443 4
Q ss_pred chhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 120 YPLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 120 f~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
-++|..|+.++.....++++.+..++
T Consensus 184 ~~v~~~a~~~L~~l~~~~~~~~~~l~ 209 (252)
T 4hxt_A 184 SEVQKEAARALANIASGPTSAIKAIV 209 (252)
T ss_dssp HHHHHHHHHHHHHHTTSBHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 58899999999999988888776654
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=95.83 E-value=0.18 Score=37.97 Aligned_cols=91 Identities=14% Similarity=0.174 Sum_probs=71.0
Q ss_pred HHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhH
Q psy13327 44 CQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLR 123 (154)
Q Consensus 44 nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR 123 (154)
.+..+.+.|.+..|+++.-++ ...+|..|+.+++.+.++++.+.+.+.+-.+ +..|+.++.+. .-++|
T Consensus 130 ~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~---------i~~L~~ll~~~-~~~v~ 197 (252)
T 4db8_A 130 QIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGA---------LPALVQLLSSP-NEQIL 197 (252)
T ss_dssp HHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTC---------HHHHHHGGGCS-SHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCChHHHHHHHHCCC---------HHHHHHHHCCC-CHHHH
Confidence 337889999999999988543 6789999999999999999988877665322 22344555444 56789
Q ss_pred HHHHHHHHHHhccChhhHHHHHH
Q psy13327 124 CSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 124 ~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
..|+.++.....++++.+..+++
T Consensus 198 ~~a~~~L~~l~~~~~~~~~~~~~ 220 (252)
T 4db8_A 198 QEALWALSNIASGGNEQKQAVKE 220 (252)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHH
Confidence 99999999999999888777654
No 8
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.58 E-value=0.17 Score=37.15 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=72.5
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
...++..+.+.|.+..++++.-++ ...+|..|..+++.+.++++...+.+.+-. .+-.|+.++.+. ..
T Consensus 85 ~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~---------~i~~L~~ll~~~-~~ 152 (210)
T 4db6_A 85 GNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAG---------ALPALVQLLSSP-NE 152 (210)
T ss_dssp CHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---------HHHHHHHHTTCS-CH
T ss_pred CcHHHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHcCCHHHHHHHHHcC---------cHHHHHHHHcCC-CH
Confidence 456778889999999999987655 589999999999999999998877664321 233345555443 56
Q ss_pred hhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 121 PLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
++|..|+.++.....++++.+..+++
T Consensus 153 ~v~~~a~~aL~~l~~~~~~~~~~~~~ 178 (210)
T 4db6_A 153 QILQEALWALSNIASGGNEQKQAVKE 178 (210)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 88999999999999988888766543
No 9
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.84 E-value=0.4 Score=36.04 Aligned_cols=91 Identities=13% Similarity=0.166 Sum_probs=68.8
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..+...+.+.|.+..++++.-++. ..++..|+.+++.+..+++.+++.+.+.. .+-.|+.++.+. .-+
T Consensus 44 ~~~~~~~~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~i~~~g---------~i~~L~~lL~~~-~~~ 111 (252)
T 4db8_A 44 NEQIQAVIDAGALPALVQLLSSPN--EQILQEALWALSNIASGGNEQIQAVIDAG---------ALPALVQLLSSP-NEQ 111 (252)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGCSC--HHHHHHHHHHHHHHTTSCHHHHHHHHHTT---------HHHHHHHGGGCS-CHH
T ss_pred CchHHHHHHcCcHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCHHHHHHHHHcC---------CHHHHHHHHcCC-CHH
Confidence 345677899999999999987665 88999999999999999999998876542 233345555543 457
Q ss_pred hHHHHHHHHHHHhccChhhHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKI 144 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~ 144 (154)
+|..|+.++.....+++..+..+
T Consensus 112 v~~~a~~~L~~l~~~~~~~~~~~ 134 (252)
T 4db8_A 112 ILQEALWALSNIASGGNEQIQAV 134 (252)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCchHHHHH
Confidence 88889999888877766553443
No 10
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=93.37 E-value=0.31 Score=39.53 Aligned_cols=85 Identities=7% Similarity=0.103 Sum_probs=61.4
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
+.+.+.+.+.|++..++++.-++ ...+|-.|+.+++.+..+++.+++.+..-.+ +..|+.++.+...-+
T Consensus 97 ~~~~~~~~~~~~i~~L~~lL~~~--~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~---------i~~L~~~l~~~~~~~ 165 (450)
T 2jdq_A 97 SLQTRIVIQAGAVPIFIELLSSE--FEDVQEQAVWALGNIAGDSTMCRDYVLDCNI---------LPPLLQLFSKQNRLT 165 (450)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC---------HHHHHHHTTSCCCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHccCCHHHHHHHHHCCC---------HHHHHHHhcCCCCHH
Confidence 45566778899999999987654 6789999999999999999888887654222 222344444334567
Q ss_pred hHHHHHHHHHHHhccC
Q psy13327 122 LRCSVLYCFLCYLYRN 137 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N 137 (154)
+|..|+.|+..+..+.
T Consensus 166 v~~~a~~~L~~l~~~~ 181 (450)
T 2jdq_A 166 MTRNAVWALSNLCRGK 181 (450)
T ss_dssp HHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHhCCC
Confidence 7888888888777654
No 11
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=92.49 E-value=1.6 Score=35.28 Aligned_cols=89 Identities=17% Similarity=0.175 Sum_probs=62.9
Q ss_pred HHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhH
Q psy13327 44 CQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLR 123 (154)
Q Consensus 44 nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR 123 (154)
....+.+.|++..++++.-++ ...+|.+|+.+++.+.+|++...+.+.+-. ++-.|+.++.+. ..++|
T Consensus 268 ~~~~~~~~~~l~~L~~ll~~~--~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~---------~l~~L~~~l~~~-~~~v~ 335 (450)
T 2jdq_A 268 QTQVILNCSALQSLLHLLSSP--KESIKKEACWTISNITAGNRAQIQTVIDAN---------IFPALISILQTA-EFRTR 335 (450)
T ss_dssp HHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHTTSCHHHHHHHHHTT---------HHHHHHHHHHHS-CHHHH
T ss_pred HHHHHHHCccHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCHHHHHHHHHCC---------CHHHHHHHHhcC-CHHHH
Confidence 344567889999999987654 578999999999999999987766554311 222344444333 56899
Q ss_pred HHHHHHHHHHhcc-ChhhHHHH
Q psy13327 124 CSVLYCFLCYLYR-NENNQAKI 144 (154)
Q Consensus 124 ~Aa~~c~kay~~~-N~~~q~~~ 144 (154)
.+|++++..+..+ +++....+
T Consensus 336 ~~a~~~L~~l~~~~~~~~~~~l 357 (450)
T 2jdq_A 336 KEAAWAITNATSGGSAEQIKYL 357 (450)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999998876 44443333
No 12
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=92.31 E-value=0.99 Score=37.46 Aligned_cols=93 Identities=14% Similarity=0.180 Sum_probs=71.4
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
+.++..+.+.|.+..++++.-++. ..++..|+.+++.+..+++..++.+.+-. .+-.|+.++.+. ..+
T Consensus 91 ~~~~~~i~~~g~i~~L~~lL~~~~--~~v~~~a~~~L~~l~~~~~~~~~~i~~~g---------~i~~L~~ll~~~-~~~ 158 (529)
T 1jdh_A 91 REGLLAIFKSGGIPALVKMLGSPV--DSVLFYAITTLHNLLLHQEGAKMAVRLAG---------GLQKMVALLNKT-NVK 158 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCSC--HHHHHHHHHHHHHHHHHCTTHHHHHHHHT---------HHHHHHHGGGCC-CHH
T ss_pred chhHHHHHHcCCHHHHHHHHcCCC--HHHHHHHHHHHHHHhcCCcchHHHHHHcC---------CHHHHHHHHhcC-CHH
Confidence 458888999999999999876543 78999999999999998877777664322 233355555543 467
Q ss_pred hHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
.|.+++.|+..+..+|++.+..+++
T Consensus 159 ~~~~~~~~L~~la~~~~~~~~~i~~ 183 (529)
T 1jdh_A 159 FLAITTDCLQILAYGNQESKLIILA 183 (529)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 8899999999999999988887765
No 13
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.17 E-value=1.7 Score=36.65 Aligned_cols=92 Identities=14% Similarity=0.233 Sum_probs=68.4
Q ss_pred HHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhH
Q psy13327 44 CQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLR 123 (154)
Q Consensus 44 nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR 123 (154)
....+.+.|++..|+.+.-++ ...|+..|+.+++.+..|+....+.+-+- .++..|+.++.+.+..++|
T Consensus 278 ~~~~~~~~g~v~~Lv~lL~~~--~~~v~~~a~~~L~nl~~~~~~~~~~~~~~---------~~l~~L~~lL~~~~~~~v~ 346 (528)
T 4b8j_A 278 KIQAVIEAGVCPRLVELLLHP--SPSVLIPALRTVGNIVTGDDAQTQCIIDH---------QALPCLLSLLTQNLKKSIK 346 (528)
T ss_dssp HHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHTT---------THHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHcCHHHHHHHHHcCC--ChhHHHHHHHHHHHHHcCCHHHHHHHHHh---------hhHHHHHHHHcCCCcHHHH
Confidence 345677889999999998765 46899999999999999998877665432 1233344555454467889
Q ss_pred HHHHHHHHHHhccChhhHHHHHH
Q psy13327 124 CSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 124 ~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
..|+.++.....++++....+++
T Consensus 347 ~~A~~~L~nl~~~~~~~~~~~~~ 369 (528)
T 4b8j_A 347 KEACWTISNITAGNKDQIQAVIN 369 (528)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHH
Confidence 99999999998888776655543
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.85 E-value=0.81 Score=38.63 Aligned_cols=87 Identities=9% Similarity=0.099 Sum_probs=60.6
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
++.+...+.++|.+..++++.-++ ...||..|+.+++.+..+++.+++.+..-.+ -|. |+.++.+...-
T Consensus 149 ~~~~~~~~~~~g~i~~L~~lL~~~--~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~-----l~~----Ll~lL~~~~~~ 217 (528)
T 4b8j_A 149 TSENTKVVIDHGAVPIFVKLLGSS--SDDVREQAVWALGNVAGDSPKCRDLVLANGA-----LLP----LLAQLNEHTKL 217 (528)
T ss_dssp CHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHTCHHHHHHHHHTTC-----HHH----HHHTCCTTCCH
T ss_pred CHHHHHHHHhCCcHHHHHHHhcCC--CHHHHHHHHHHHHHHhCCChhhHHHHHHCCc-----HHH----HHHHHhcCCCH
Confidence 467888889999999999988764 5789999999999999999988887765322 111 23333222344
Q ss_pred hhHHHHHHHHHHHhccCh
Q psy13327 121 PLRCSVLYCFLCYLYRNE 138 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~ 138 (154)
.+|..|+.++...+.+.+
T Consensus 218 ~v~~~a~~~L~~L~~~~~ 235 (528)
T 4b8j_A 218 SMLRNATWTLSNFCRGKP 235 (528)
T ss_dssp HHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 566666666666655543
No 15
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=91.59 E-value=2.7 Score=35.54 Aligned_cols=108 Identities=9% Similarity=0.128 Sum_probs=73.5
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCC
Q psy13327 23 ALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPP 102 (154)
Q Consensus 23 ~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~ 102 (154)
.++..+|-+++.+.. .+-..+.++|++..++++.-++ -...+|.+|+.+++.+..+++.....+..-. .
T Consensus 106 ~A~~~L~~ll~~~~~-----~~~~~~~~~g~i~~Lv~~L~~~-~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g-----~ 174 (530)
T 1wa5_B 106 SATVKFRQILSREHR-----PPIDVVIQAGVVPRLVEFMREN-QPEMLQLEAAWALTNIASGTSAQTKVVVDAD-----A 174 (530)
T ss_dssp HHHHHHHHHTCCSSS-----CSHHHHHHTTCHHHHHHTTSTT-SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTT-----C
T ss_pred HHHHHHHHHhCCCCC-----ccHHHHHHCCCHHHHHHHhCCC-CCHHHHHHHHHHHHHHhCCCHHHHHHHHHCC-----C
Confidence 345555655554311 1124577899999999876543 3578999999999999999988877664322 2
Q ss_pred hHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 103 RQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 103 ~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
-|.++-+|- + ..-++|..|+.++.....++++.+..++.
T Consensus 175 i~~Lv~lL~----~-~~~~vr~~A~~aL~~l~~~~~~~~~~~~~ 213 (530)
T 1wa5_B 175 VPLFIQLLY----T-GSVEVKEQAIWALGNVAGDSTDYRDYVLQ 213 (530)
T ss_dssp HHHHHHHHH----H-CCHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHc----C-CCHHHHHHHHHHHHHHhCCCccchHHHHH
Confidence 344444333 2 35678999999999999888777666543
No 16
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=90.91 E-value=1.2 Score=37.04 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=67.9
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHH---hHHHhhcccCCCCCChHHHHHHHHHHhhcCC
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHE---NQEHFANVYAPSDPPRQAIVVLLMSMVNQKQ 118 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~---nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~ 118 (154)
+.+...+.+.|.+..++++.-.+.-...++..|+.+++.+..+++. .|+.+....+ +-.|..++.+..
T Consensus 298 ~~~~~~~~~~~~v~~L~~ll~~~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~i~~~~~---------i~~L~~lL~~~~ 368 (529)
T 1jdh_A 298 YKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYG---------LPVVVKLLHPPS 368 (529)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTTC---------HHHHHHTTSTTC
T ss_pred HHHHHHHHHcCChHHHHHHHHccCCHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHcCC---------hhHHHHHhcccc
Confidence 5688899999999999999887666689999999999999988765 3555543222 222455555544
Q ss_pred cchhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 119 SYPLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 119 ~f~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
..++|.+|+.++.....+++ .|..++
T Consensus 369 ~~~v~~~a~~~l~nl~~~~~-~~~~~~ 394 (529)
T 1jdh_A 369 HWPLIKATVGLIRNLALCPA-NHAPLR 394 (529)
T ss_dssp CHHHHHHHHHHHHHHTTSGG-GHHHHH
T ss_pred chHHHHHHHHHHHHHhcChh-hhHHHH
Confidence 45889999999988876544 444444
No 17
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=90.77 E-value=4.4 Score=37.43 Aligned_cols=128 Identities=16% Similarity=0.145 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHhcCCCCCc--------------cchHHHHHHHHhc---------HHHHHHHHhcCcCCChhhHHHHH
Q psy13327 19 SNILALLKVIRSLVTPGNPAQ--------------VVSSCQFVLQVSG---------ILGSLCNLLMAAGVPACILTETI 75 (154)
Q Consensus 19 ~Ni~~~L~ivrllV~p~n~~~--------------~t~~nQ~~l~q~g---------ll~~ll~Laf~~~~p~~Ir~eAL 75 (154)
..-.++-.++|++.+++-+.. +-+.||..|.+-- ++..++. ...+.-+.++|++|.
T Consensus 308 ~~~g~l~~Ll~ll~~~~~p~~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p~li~lL~~-~~~~~~~~~lR~Aa~ 386 (651)
T 3grl_A 308 FQCGLLQQLCTILMATGVPADILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRPAIVVLLMS-MVNERQPFVLRCAVL 386 (651)
T ss_dssp HHTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEEHHHHHHHH-HTCTTSCHHHHHHHH
T ss_pred HHCCCHHHHHHHHccCCCCHHHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcChHHHHHHH-HhcccccHHHHHHHH
Confidence 333445578898888764311 3368999998743 4444433 345677899999999
Q ss_pred HHHHHHHhcCHHhHHHhhcccCCCCC-----ChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHHHhc
Q psy13327 76 NTVAEIIRSNHENQEHFANVYAPSDP-----PRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIATLL 149 (154)
Q Consensus 76 ~t~adlIrgn~~nQe~fa~~~vps~p-----~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~Tll 149 (154)
.+..-...+|...|..+.+-.+|+.. +.+ .-.+|..-.-+..++..=+ |+-+|---+++|++.|..+..--+
T Consensus 387 ~cl~ay~~~N~~~Q~~i~~~llp~~~~~~~~~~s-~g~ll~~~l~s~d~~~~wf-Aavil~hll~~n~~~K~~~l~v~l 463 (651)
T 3grl_A 387 YCFQCFLYKNQKGQGEIVSTLLPSTIDATGNTVS-AGQLLCGGLFSTDSLSNWC-AAVALAHALQENATQKEQLLRVQL 463 (651)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTSSCCCCCTTSSSC-HHHHHHHHHTSSCHHHHHH-HHHHHHHHHTTCHHHHHHHTTCBC
T ss_pred HHHHHHHhCCHHHHHHHHHhcCCcccccCCCCCC-cchhhhhhhccCchHHHHH-HHHHHHHHHcCCHHHHHHHHhCcc
Confidence 99999999999999999999888532 122 2223332222456666556 556677778899999987765433
No 18
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=90.56 E-value=1.4 Score=37.39 Aligned_cols=85 Identities=9% Similarity=0.111 Sum_probs=60.5
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
++.+...+.+.|.+..++++.-++ ...||..|+.+++.+..+++.+++.+..-.+ -|. |+.++.+ ..-
T Consensus 162 ~~~~~~~~~~~g~i~~Lv~lL~~~--~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~-----l~~----L~~ll~~-~~~ 229 (530)
T 1wa5_B 162 TSAQTKVVVDADAVPLFIQLLYTG--SVEVKEQAIWALGNVAGDSTDYRDYVLQCNA-----MEP----ILGLFNS-NKP 229 (530)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHHC--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC-----HHH----HHHGGGS-CCH
T ss_pred CHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCCCccchHHHHHcCc-----HHH----HHHHhcc-CCH
Confidence 356777888999999999988753 6789999999999999999888887654322 122 3333333 345
Q ss_pred hhHHHHHHHHHHHhccC
Q psy13327 121 PLRCSVLYCFLCYLYRN 137 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N 137 (154)
++|..|+.|+.....+.
T Consensus 230 ~v~~~a~~~L~~L~~~~ 246 (530)
T 1wa5_B 230 SLIRTATWTLSNLCRGK 246 (530)
T ss_dssp HHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 66777777777666544
No 19
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=90.44 E-value=1.6 Score=38.22 Aligned_cols=93 Identities=14% Similarity=0.185 Sum_probs=70.4
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..+...+.+.|.+..++++.-++ ...++..|+.+++.+..++...+..+.+-. .+-.|+.++.+.. -+
T Consensus 88 ~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g---------~i~~Lv~lL~~~~-~~ 155 (644)
T 2z6h_A 88 REGLLAIFKSGGIPALVKMLGSP--VDSVLFYAITTLHNLLLHQEGAKMAVRLAG---------GLQKMVALLNKTN-VK 155 (644)
T ss_dssp HHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---------HHHHHHHGGGCCC-HH
T ss_pred hhhHHHHHHcCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHhCcchhHHHHHHCC---------ChHHHHHHHCcCC-HH
Confidence 34788889999999999987654 478999999999999998876666554321 2334555555553 37
Q ss_pred hHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+|.+++.|+.....+|++.+..+++
T Consensus 156 ~~~~a~~~L~~La~~~~~~~~~i~~ 180 (644)
T 2z6h_A 156 FLAITTDCLQILAYGNQESKLIILA 180 (644)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 8899999999988889888877654
No 20
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=90.02 E-value=1.2 Score=37.19 Aligned_cols=90 Identities=13% Similarity=0.141 Sum_probs=71.3
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
...++..+.++|.+..|+++.-+ -...++.+|..+++.+-.|++.++..+.+-- .+-.|..++.++ ..
T Consensus 252 ~~~~~~~i~~~g~i~~Lv~lL~~--~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---------~i~~Lv~LL~s~-~~ 319 (354)
T 3nmw_A 252 NEDHRQILRENNCLQTLLQHLKS--HSLTIVSNACGTLWNLSARNPKDQEALWDMG---------AVSMLKNLIHSK-HK 319 (354)
T ss_dssp CHHHHHHHHTTTHHHHHHHHTTC--SCHHHHHHHHHHHHHHTSSCHHHHHHHHHTT---------HHHHHHTTTTCS-SH
T ss_pred CHHHHHHHHHcCCHHHHHHHHcC--CChHHHHHHHHHHHHHhCCCHHHHHHHHHCC---------CHHHHHHHHhCC-CH
Confidence 45678889999999999999875 3467999999999999999999988875432 223355555555 56
Q ss_pred hhHHHHHHHHHHHhccChhhHH
Q psy13327 121 PLRCSVLYCFLCYLYRNENNQA 142 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~~~q~ 142 (154)
++|-.|+..+...+.++++-+.
T Consensus 320 ~i~~~A~~aL~nL~~~~~~~~~ 341 (354)
T 3nmw_A 320 MIAMGSAAALRNLMANRPAKYK 341 (354)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGC
T ss_pred HHHHHHHHHHHHHHcCCHHHHh
Confidence 8899999999999999888655
No 21
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=87.85 E-value=11 Score=32.04 Aligned_cols=108 Identities=9% Similarity=0.075 Sum_probs=76.7
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCC
Q psy13327 23 ALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPP 102 (154)
Q Consensus 23 ~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~ 102 (154)
.++.-+|-|++.+.. +.- ..+.++|++..|+++.-.+ -...++-+|..+++.+-.|++.+...+..--
T Consensus 95 ~a~~~~rklLs~~~~----~~i-~~ii~~G~ip~Lv~lL~~~-~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~G------ 162 (529)
T 3tpo_A 95 QATQAARKLLSREKQ----PPI-DNIIRAGLIPKFVSFLGKT-DCSPIQFESAWALTNIASGTSEQTKAVVDGG------ 162 (529)
T ss_dssp HHHHHHHHHHTSSSC----CCH-HHHHHTTHHHHHHHHHTCT-TCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT------
T ss_pred HHHHHHHHHHcCCCC----chH-HHHHHCCCHHHHHHHHcCC-CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCC------
Confidence 456677777765421 222 3467899999999987543 4568999999999999999998876554321
Q ss_pred hHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 103 RQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 103 ~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
.+..|+.++.+. .-++|..|+.++.....++++.|..+++
T Consensus 163 ---aip~Lv~LL~s~-~~~v~e~A~~aL~nLa~~~~~~r~~i~~ 202 (529)
T 3tpo_A 163 ---AIPAFISLLASP-HAHISEQAVWALGNIAGAGSAFRDLVIK 202 (529)
T ss_dssp ---HHHHHHHHTTCS-CHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---CHHHHHHHHcCC-CHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 222344455444 4678899999999888888988887754
No 22
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=87.31 E-value=12 Score=31.78 Aligned_cols=108 Identities=9% Similarity=0.082 Sum_probs=75.4
Q ss_pred HHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCC
Q psy13327 23 ALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPP 102 (154)
Q Consensus 23 ~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~ 102 (154)
-+..-+|-+++... .+.- ..+.++|++-.|.++.-.+. ...++-+|..+++.+-.|++.+.....+--
T Consensus 76 ~a~~~~rklls~e~----~ppi-~~ii~~G~ip~LV~lL~~~~-~~~lq~~Aa~aL~nias~~~e~~~~vv~~G------ 143 (510)
T 3ul1_B 76 QATQAARKLLSREK----QPPI-DNIIRAGLIPKFVSFLGKTD-CSPIQFESAWALTNIASGTSEQTKAVVDGG------ 143 (510)
T ss_dssp HHHHHHHHHHTCSS----CCCH-HHHHHTTHHHHHHHHTTCTT-CHHHHHHHHHHHHHHHTSCHHHHHHHHHTT------
T ss_pred HHHHHHHHHhcCCC----CchH-HHHHHCCCHHHHHHHHCCCC-CHHHHHHHHHHHHHHhcCCHHHHHHHHHCC------
Confidence 35566676666542 1222 34678999999999875443 457999999999999999999887664321
Q ss_pred hHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 103 RQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 103 ~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
.+-.|+.++.+. .-++|..|+.++.-...++++.|..+++
T Consensus 144 ---aIp~Lv~lL~s~-~~~v~e~A~~aL~nLa~d~~~~r~~v~~ 183 (510)
T 3ul1_B 144 ---AIPAFISLLASP-HAHISEQAVWALGNIAGDGSAFRDLVIK 183 (510)
T ss_dssp ---HHHHHHHHTTCS-CHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ---CHHHHHHHHcCC-CHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 122344444443 5678999999999888888888877654
No 23
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=86.67 E-value=3.8 Score=37.31 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=70.1
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..|...+.+.|.+..|+++.=+. ...++-+|+.+++.+..+++..+..+.+-. ++-.|+.++.+. ..+
T Consensus 224 ~~~~~~i~~~g~I~~Lv~lL~~~--~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g---------~v~~Lv~lL~~~-~~~ 291 (780)
T 2z6g_A 224 REGLLAIFKSGGIPALVNMLGSP--VDSVLFHAITTLHNLLLHQEGAKMAVRLAG---------GLQKMVALLNKT-NVK 291 (780)
T ss_dssp HHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHSTTHHHHHHHTT---------HHHHHHHGGGCC-CHH
T ss_pred chhHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCCChhhHHHHHHcC---------CHHHHHHHHhcC-CHH
Confidence 45677888899999999988654 478999999999999998877766654321 233355555443 457
Q ss_pred hHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+|..|+.|+.....+|++++..+++
T Consensus 292 v~~~a~~aL~~La~~~~e~~~~i~~ 316 (780)
T 2z6g_A 292 FLAITTDCLQILAYGNQESKLIILA 316 (780)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCChHHHHHHHH
Confidence 7888999999888899988887654
No 24
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=85.47 E-value=3.8 Score=35.65 Aligned_cols=87 Identities=14% Similarity=0.151 Sum_probs=68.2
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
.+.+...+.++|.+..|+++.-+ -+..++.+|..+++.+-.|++.++..+.+-- .+-.|..++.++ ..
T Consensus 368 ~~~~~~~i~~~G~i~~Lv~LL~~--~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G---------~I~~Lv~LL~s~-~~ 435 (458)
T 3nmz_A 368 NEDHRQILRENNCLQTLLQHLKS--HSLTIVSNACGTLWNLSARNPKDQEALWDMG---------AVSMLKNLIHSK-HK 435 (458)
T ss_dssp CHHHHHHHHHTTHHHHHHHHSSC--SCHHHHHHHHHHHHHHHSSCHHHHHHHHHHT---------HHHHHHTTTTCS-SH
T ss_pred CHHHHHHHHHcccHHHHHHHHcC--CChHHHHHHHHHHHHHHcCCHHHHHHHHHCC---------CHHHHHHHHhCC-CH
Confidence 45678889999999999999864 3567999999999999999999998876532 233355555554 56
Q ss_pred hhHHHHHHHHHHHhccChh
Q psy13327 121 PLRCSVLYCFLCYLYRNEN 139 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~~ 139 (154)
++|-.|+..+...+.+||.
T Consensus 436 ~v~~~Aa~AL~nL~~~~p~ 454 (458)
T 3nmz_A 436 MIAMGSAAALRNLMANRPA 454 (458)
T ss_dssp HHHHHHHHHHHHHHTCCSC
T ss_pred HHHHHHHHHHHHHHcCCHh
Confidence 7889999999999888864
No 25
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=84.98 E-value=13 Score=30.98 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=64.7
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCC---
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQ--- 118 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~--- 118 (154)
..|...+.++|.+..|+++...+. ...++..|+.++..+-.++..|+..+... .+.-|.++ .++.+..
T Consensus 160 ~~~k~~i~~~G~Ip~Lv~lL~~~~-~~~~~~~A~~aL~nLs~~~~~nk~~i~~~----~Gai~~Lv----~lL~~~~~~~ 230 (354)
T 3nmw_A 160 VNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAHCTENKADICAV----DGALAFLV----GTLTYRSQTN 230 (354)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHTTCHHHHHHHHHS----TTHHHHHH----HHTTCCCSSS
T ss_pred HHHHHHHHHCCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHHccChhhhHHHHHh----cCcHHHHH----HHhccCCCcc
Confidence 468889999999999999877544 45788899999999988898888776531 12223333 3333322
Q ss_pred cchhHHHHHHHHH---HHhccChhhHHHHHH
Q psy13327 119 SYPLRCSVLYCFL---CYLYRNENNQAKIIA 146 (154)
Q Consensus 119 ~f~lR~Aa~~c~k---ay~~~N~~~q~~~i~ 146 (154)
..+++-.|+.++. +|+.++++.+..+++
T Consensus 231 ~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~ 261 (354)
T 3nmw_A 231 TLAIIESGGGILRNVSSLIATNEDHRQILRE 261 (354)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHhhccCCHHHHHHHHH
Confidence 2356666666665 344578888877654
No 26
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=84.74 E-value=2.2 Score=38.95 Aligned_cols=94 Identities=13% Similarity=0.172 Sum_probs=65.9
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHh---HHHhhcccCCCCCChHHHHHHHHHHhhcCC
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHEN---QEHFANVYAPSDPPRQAIVVLLMSMVNQKQ 118 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~n---Qe~fa~~~vps~p~~p~i~vLLl~~~~s~~ 118 (154)
..++..+.+.|.+..|+++...+..+..||..|+.+++.+-.+++.. |..+..-. . +-.|+.++.+.+
T Consensus 431 ~~~~~~i~~~g~i~~Lv~lL~~~~~~~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~-----~----l~~L~~lL~~~~ 501 (780)
T 2z6g_A 431 YKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQDAEMAQNAVRLHY-----G----LPVVVKLLHPPS 501 (780)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTT-----C----HHHHHHTTSTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHcC-----C----HHHHHHHhcCCC
Confidence 56788889999999999999876666799999999999998776553 33332211 1 222445555555
Q ss_pred cchhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 119 SYPLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 119 ~f~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
..++|.+|+.++..... +++.|..++
T Consensus 502 ~~~v~~~A~~aL~nLa~-~~~~~~~i~ 527 (780)
T 2z6g_A 502 HWPLIKATVGLIRNLAL-CPANHAPLR 527 (780)
T ss_dssp CHHHHHHHHHHHHHHHS-SHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhc-CHHHHHHHH
Confidence 56889999999887765 445554444
No 27
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=84.22 E-value=15 Score=31.81 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=66.0
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCC---
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQ--- 118 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~--- 118 (154)
..|...+.++|.+..|+++...+. ...++..|+.++..+-.++..|+..+... .+.-|.++ .++.+..
T Consensus 276 ~~~k~~I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL~nLs~~~~~nk~~I~~~----~Gal~~Lv----~LL~~~~~~~ 346 (458)
T 3nmz_A 276 VNSKKTLREVGSVKALMECALEVK-KESTLKSVLSALWNLSAHCTENKADICAV----DGALAFLV----GTLTYRSQTN 346 (458)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHHCHHHHHHHHHS----TTHHHHHH----HHTTCCCSSS
T ss_pred HHHHHHHHHcCCHHHHHHHHhcCC-CHHHHHHHHHHHHHHccCCHHHHHHHHHh----cCcHHHHH----HHhcCCCCcc
Confidence 468889999999999999987654 56788999999999998888898877531 11223333 3333222
Q ss_pred cchhHHHHHHHHH---HHhccChhhHHHHHH
Q psy13327 119 SYPLRCSVLYCFL---CYLYRNENNQAKIIA 146 (154)
Q Consensus 119 ~f~lR~Aa~~c~k---ay~~~N~~~q~~~i~ 146 (154)
..+++..|+.++. +|+.++++.+..+++
T Consensus 347 ~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~ 377 (458)
T 3nmz_A 347 TLAIIESGGGILRNVSSLIATNEDHRQILRE 377 (458)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcccCCHHHHHHHHH
Confidence 2245666666655 355688888877654
No 28
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=84.19 E-value=7.7 Score=33.09 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=48.0
Q ss_pred cchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccC
Q psy13327 40 VVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYA 97 (154)
Q Consensus 40 ~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~v 97 (154)
+++.+.+++.+.|.+..++++.-++ ...||-.|+.+++.+...++.+++.+.+--+
T Consensus 131 ~~~e~~~~vv~~GaIp~Lv~lL~s~--~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~ 186 (510)
T 3ul1_B 131 GTSEQTKAVVDGGAIPAFISLLASP--HAHISEQAVWALGNIAGDGSAFRDLVIKHGA 186 (510)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCC
Confidence 4677889999999999999998653 5789999999999999999999998876544
No 29
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=83.23 E-value=4.5 Score=35.37 Aligned_cols=93 Identities=13% Similarity=0.153 Sum_probs=64.9
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCH---HhHHHhhcccCCCCCChHHHHHHHHHHhhcCC
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNH---ENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQ 118 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~---~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~ 118 (154)
+.++..+.+.|.+..|+++.-.......|+..|+.+++.+..+++ ..|..+.... .+-.|+.++.+..
T Consensus 295 ~~~~~~v~~~g~v~~Lv~lL~~~~~~~~v~~~a~~aL~nL~~~~~~~~~~q~~v~~~~---------~l~~L~~lL~~~~ 365 (644)
T 2z6h_A 295 YKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHY---------GLPVVVKLLHPPS 365 (644)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSSTTHHHHHHHHHHTT---------HHHHHHHTTSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHccCCcHHHHHHHHHHHHHHhcCCchHHHHHHHHHHcc---------ChHHHHHHhCccC
Confidence 567888999999999999988765556999999999999987655 3454333211 1223455555544
Q ss_pred cchhHHHHHHHHHHHhccChhhHHHH
Q psy13327 119 SYPLRCSVLYCFLCYLYRNENNQAKI 144 (154)
Q Consensus 119 ~f~lR~Aa~~c~kay~~~N~~~q~~~ 144 (154)
..++|.+|+.++.....++ +.|..+
T Consensus 366 ~~~v~~~a~~~L~nLa~~~-~~~~~i 390 (644)
T 2z6h_A 366 HWPLIKATVGLIRNLALCP-ANHAPL 390 (644)
T ss_dssp CHHHHHHHHHHHHHHTTSG-GGHHHH
T ss_pred chHHHHHHHHHHHHHccCH-HHHHHH
Confidence 5688999999988776654 344444
No 30
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=83.22 E-value=1.4 Score=39.71 Aligned_cols=54 Identities=22% Similarity=0.238 Sum_probs=31.2
Q ss_pred hHHHHHHHHhcHHHHHHHHhc----CcC-C--------C-----hhhHHHHHHHHHHHHhcCHHhHHHhhcc
Q psy13327 42 SSCQFVLQVSGILGSLCNLLM----AAG-V--------P-----ACILTETINTVAEIIRSNHENQEHFANV 95 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf----~~~-~--------p-----~~Ir~eAL~t~adlIrgn~~nQe~fa~~ 95 (154)
...|+.|..-|++..|+.+.- .+. . . ..|-...-.-++-+||||..||.+|++-
T Consensus 472 r~RQkLlrEq~il~ll~~il~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~LL~~~i~~N~~N~~y~~~~ 543 (559)
T 2xoa_A 472 RNRQSLFQEEGMLSLVLNCIDRLNVYTTAAHFAEYAGEEAAESWKEIVNLLYELLASLIRGNRANCALFSTN 543 (559)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHTTSCC------CCCSTGGGTHHHHHHHHHHHHHHHHCC-----------
T ss_pred HHHHHHHhhhchHHHHHHHHHHhhccCchhhHHHhhcchhHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 358999999999999999983 110 0 0 1255666677899999999999999984
No 31
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=82.73 E-value=11 Score=32.23 Aligned_cols=81 Identities=14% Similarity=0.053 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-------------CccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHH
Q psy13327 15 AQRESNILALLKVIRSLVTPGNP-------------AQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEI 81 (154)
Q Consensus 15 ~Qk~~Ni~~~L~ivrllV~p~n~-------------~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adl 81 (154)
-+.+....++=.+|++|-..+++ ..+++.+.+++.+.|.+..++++.-++ ...++-.|+.+++.+
T Consensus 112 i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~--~~~v~e~A~~aL~nL 189 (529)
T 3tpo_A 112 IDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASP--HAHISEQAVWALGNI 189 (529)
T ss_dssp HHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHH
Confidence 34455544445566666444432 114567778999999999999977554 468999999999999
Q ss_pred HhcCHHhHHHhhcccC
Q psy13327 82 IRSNHENQEHFANVYA 97 (154)
Q Consensus 82 Irgn~~nQe~fa~~~v 97 (154)
...++.+++.+.+--+
T Consensus 190 a~~~~~~r~~i~~~g~ 205 (529)
T 3tpo_A 190 AGAGSAFRDLVIKHGA 205 (529)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred hccCHHHHHHHHHcCC
Confidence 9999999998866443
No 32
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=81.55 E-value=2.1 Score=36.23 Aligned_cols=96 Identities=9% Similarity=-0.017 Sum_probs=62.2
Q ss_pred HHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHH
Q psy13327 45 QFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRC 124 (154)
Q Consensus 45 Q~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~ 124 (154)
...+|+.|.+..++.+.-.+.- ..++..|..+++.+.+|+......-++..+-....-|.+ +.++.+ ..+++|.
T Consensus 276 ~~~l~~~~~l~~L~~lL~~~~~-~~~~e~a~~aL~nl~~~~~~~~~~~~~~~v~~~~~l~~L----v~LL~~-~~~~v~~ 349 (457)
T 1xm9_A 276 SGWLYHSDAIRTYLNLMGKSKK-DATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQI----ARLLQS-GNSDVVR 349 (457)
T ss_dssp GGGGGSHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHTTCSSSHHHHHHHHHHTTSCCHHHH----HHHTTC-SCHHHHH
T ss_pred HHHHhCcchHHHHHHHHhhcCC-HHHHHHHHHHHHHhccCcCcchHHHHHHHHHHcCCchHH----HHHHhC-CCHhHHH
Confidence 3578999999999998876543 589999999999999998543222222222122223433 333433 3678899
Q ss_pred HHHHHHHHHhccChhhHHHHHHH
Q psy13327 125 SVLYCFLCYLYRNENNQAKIIAT 147 (154)
Q Consensus 125 Aa~~c~kay~~~N~~~q~~~i~T 147 (154)
.|+.++.-. ..+++.+..+-+.
T Consensus 350 ~A~~aL~nl-s~~~~~~~~i~~~ 371 (457)
T 1xm9_A 350 SGASLLSNM-SRHPLLHRVMGNQ 371 (457)
T ss_dssp HHHHHHHHH-HTSGGGHHHHHHH
T ss_pred HHHHHHHHH-hcCHHHHHHHHHh
Confidence 999888755 4467777655443
No 33
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=78.18 E-value=11 Score=35.27 Aligned_cols=93 Identities=11% Similarity=0.059 Sum_probs=70.1
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..++..+.+.|.+..|.++.++. ...|+..|..+++.+..|. ..|..|.. .. . .+-+|+.++.+. ..+
T Consensus 613 d~~~~~Ii~aG~l~~Lv~LL~s~--~~~Vq~~A~~~L~NLa~~~-~~~~~~v~-~~----g---~l~~Lv~LL~s~-d~~ 680 (810)
T 3now_A 613 ESVRQRIIKEQGVSKIEYYLMED--HLYLTRAAAQCLCNLVMSE-DVIKMFEG-NN----D---RVKFLALLCEDE-DEE 680 (810)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHSC--CTTHHHHHHHHHHHHTTSH-HHHHHHHS-SS----S---HHHHHHHGGGCS-SHH
T ss_pred HHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCCh-HHHHHHHh-cc----C---cHHHHHHHhcCC-CHH
Confidence 35677888999999999999875 4679999999999999865 57888861 11 1 233455666553 679
Q ss_pred hHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+|.+|+-++-....++++....+++
T Consensus 681 vq~~Aa~ALanLt~~s~~~~~~ii~ 705 (810)
T 3now_A 681 TATACAGALAIITSVSVKCCEKILA 705 (810)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 9999999888877777777766665
No 34
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=77.95 E-value=20 Score=30.15 Aligned_cols=92 Identities=12% Similarity=0.105 Sum_probs=64.1
Q ss_pred HHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchh
Q psy13327 43 SCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPL 122 (154)
Q Consensus 43 ~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~l 122 (154)
.++..+.+.|.+..++++.-++ ...++-+|..++..+-.+|+.+...+.+--+ -|.++-+| .....-++
T Consensus 35 ~~~~~i~~~g~i~~Lv~lL~s~--~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~-----i~~Lv~lL----~~~~~~~~ 103 (457)
T 1xm9_A 35 SAKQQVYQLGGICKLVDLLRSP--NQNVQQAAAGALRNLVFRSTTNKLETRRQNG-----IREAVSLL----RRTGNAEI 103 (457)
T ss_dssp SHHHHHHHTTHHHHHHHHTTSS--CHHHHHHHHHHHHHHHSSCHHHHHHHHHTTC-----HHHHHHHH----TTCCCHHH
T ss_pred HHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCHHHHHHHHHcCC-----HHHHHHHH----hhCCCHHH
Confidence 4556888999999999998753 4578999999999999999999988765433 34444333 31224466
Q ss_pred HHHHHHHHHHHhccChhhHHHHHH
Q psy13327 123 RCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 123 R~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
|.-|..++..-..+ ++.+..+++
T Consensus 104 ~~~a~~aL~nLa~~-~~~~~~i~~ 126 (457)
T 1xm9_A 104 QKQLTGLLWNLSST-DELKEELIA 126 (457)
T ss_dssp HHHHHHHHHHHHTS-SSTHHHHHH
T ss_pred HHHHHHHHHHHhcC-HHhHHHHHh
Confidence 77777777655544 666665554
No 35
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=77.91 E-value=12 Score=33.63 Aligned_cols=93 Identities=11% Similarity=0.066 Sum_probs=64.3
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcC------CChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhh
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAG------VPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVN 115 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~------~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~ 115 (154)
+.||..+ ..|.+..|.++.-++. ....+.+.|+.|++.++.||+.+...+..-.. -|. |..++.
T Consensus 386 ~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~~~I~~~g~-----I~~----Lv~LL~ 455 (584)
T 3l6x_A 386 ARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAAKKLRETQG-----IEK----LVLINK 455 (584)
T ss_dssp CSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTH-----HHH----HHHHHT
T ss_pred hhHHHHH-HhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCC-----hHH----HHHHHh
Confidence 4578877 6788999999988763 34688999999999999999998887654332 233 334444
Q ss_pred cC-CcchhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 116 QK-QSYPLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 116 s~-~~f~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
++ ..-..+-+|+.++..... |.+.|..+-
T Consensus 456 s~~~~~~v~k~Aa~vL~nl~~-~~elr~~~k 485 (584)
T 3l6x_A 456 SGNRSEKEVRAAALVLQTIWG-YKELRKPLE 485 (584)
T ss_dssp CSSSCHHHHHHHHHHHHHHHT-SHHHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHc-CHHHHHHHH
Confidence 43 234566667777765543 777766654
No 36
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=73.06 E-value=62 Score=30.33 Aligned_cols=93 Identities=12% Similarity=0.067 Sum_probs=67.5
Q ss_pred hHHHHHHHH-hcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcc
Q psy13327 42 SSCQFVLQV-SGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSY 120 (154)
Q Consensus 42 ~~nQ~~l~q-~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f 120 (154)
+.+|+.+.. +|.+..|+.+.-+ -...+|.+|.-+++.+-.|++.....+.+. .. .+-.|..++.+ ..+
T Consensus 654 ~~~~~~~v~~~g~l~~Lv~LL~s--~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~----~g----~I~~Lv~LL~s-~d~ 722 (810)
T 3now_A 654 EDVIKMFEGNNDRVKFLALLCED--EDEETATACAGALAIITSVSVKCCEKILAI----AS----WLDILHTLIAN-PSP 722 (810)
T ss_dssp HHHHHHHHSSSSHHHHHHHGGGC--SSHHHHHHHHHHHHHHHHHCHHHHHHHHTS----TT----HHHHHHHHHTC-SSH
T ss_pred hHHHHHHHhccCcHHHHHHHhcC--CCHHHHHHHHHHHHHHhCCCHHHHHHHHHH----cC----CHHHHHHHHCC-CCH
Confidence 456777775 7999999888765 467999999999999999988766655432 11 12234444443 478
Q ss_pred hhHHHHHHHHHHHhccChhhHHHHH
Q psy13327 121 PLRCSVLYCFLCYLYRNENNQAKII 145 (154)
Q Consensus 121 ~lR~Aa~~c~kay~~~N~~~q~~~i 145 (154)
++|..|+.|+......+++....++
T Consensus 723 ~vq~~A~~aL~NL~~~s~e~~~~l~ 747 (810)
T 3now_A 723 AVQHRGIVIILNMINAGEEIAKKLF 747 (810)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 9999999999999887776665554
No 37
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=66.80 E-value=45 Score=26.22 Aligned_cols=93 Identities=11% Similarity=0.101 Sum_probs=63.5
Q ss_pred hHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 42 SSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 42 ~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..|...+.+.|.+..|.++.-+. ...++.+|.-++..+-.+|+.|......-- .-|.++-+|.+ ....+
T Consensus 42 ~~~r~~I~~~G~Ip~LV~lL~s~--~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~G-----aI~~Lv~lL~~----~~~~~ 110 (233)
T 3tt9_A 42 SEARKRVNQLRGILKLLQLLKVQ--NEDVQRAVCGALRNLVFEDNDNKLEVAELN-----GVPRLLQVLKQ----TRDLE 110 (233)
T ss_dssp HHHHHHHHHTTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTT-----HHHHHHHHHHH----CCCHH
T ss_pred cHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHcC-----CHHHHHHHHcc----CCCHH
Confidence 56788899999999999998653 578999999999999999999998776532 23444444432 22345
Q ss_pred hHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 122 LRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 122 lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
+|-.|...+.. +..+++.+..+++
T Consensus 111 ~~e~a~~aL~n-LS~~~~~k~~i~~ 134 (233)
T 3tt9_A 111 TKKQITGLLWN-LSSNDKLKNLMIT 134 (233)
T ss_dssp HHHHHHHHHHH-HHTSGGGHHHHHH
T ss_pred HHHHHHHHHHH-HHcChhhHHHHHh
Confidence 55555444432 3456666666544
No 38
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=59.60 E-value=42 Score=26.71 Aligned_cols=60 Identities=17% Similarity=0.247 Sum_probs=42.4
Q ss_pred HHHHHHHHhcCCCCCccchHHHHHHH------HhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcC
Q psy13327 24 LLKVIRSLVTPGNPAQVVSSCQFVLQ------VSGILGSLCNLLMAAGVPACILTETINTVAEIIRSN 85 (154)
Q Consensus 24 ~L~ivrllV~p~n~~~~t~~nQ~~l~------q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn 85 (154)
+.++++-+.+|++. ...+....+. ..|....++.+...+..+..||-.|...+...|+.+
T Consensus 3 l~~~L~~~~s~d~~--~r~~Ae~~L~~~~~~~~~~~~~~L~~il~~~~~~~~vR~~a~~~Lk~~i~~~ 68 (462)
T 1ibr_B 3 LITILEKTVSPDRL--ELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSK 68 (462)
T ss_dssp HHHHHHHTTCSCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHhcCCCHH--HHHHHHHHHHHHHhhChHHHHHHHHHHHHcCCCChHHHHHHHHHHHHhcccc
Confidence 34566667777743 4444444432 256777888888887789999999999999998764
No 39
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=58.21 E-value=7 Score=31.36 Aligned_cols=65 Identities=6% Similarity=-0.016 Sum_probs=46.5
Q ss_pred CCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhccChh
Q psy13327 65 GVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNEN 139 (154)
Q Consensus 65 ~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~ 139 (154)
...-.+|-.|+.++|.+..|.... . + .+..+.++-.++..+++.+ ..+|.+|++|+..|....+.
T Consensus 377 ~~~~~~r~aal~~l~~l~~~~~~~--~-----~--~~~l~~~~~~l~~~l~d~~-~~Vr~~a~~~l~~~~~~~~~ 441 (462)
T 1ibr_B 377 NPDWRYRDAAVMAFGCILEGPEPS--Q-----L--KPLVIQAMPTLIELMKDPS-VVVRDTAAWTVGRICELLPE 441 (462)
T ss_dssp CSSHHHHHHHHHHHHHTSSSSCTT--T-----T--CTTTTTHHHHHHHGGGCSC-HHHHHHHHHHHHHHHHHGGG
T ss_pred CCChHHHHHHHHHHHHHhcCCcHH--H-----H--HHHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHhccc
Confidence 446789999999999999875310 0 0 1122456666777777764 67999999999999876543
No 40
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=58.00 E-value=71 Score=28.68 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=67.6
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhc-CHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRS-NHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQS 119 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrg-n~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~ 119 (154)
...|...+.+.|.+..|+++.-+. ...++..|..++..+-.| |..|.+...+--+ -|.++-+|. +...
T Consensus 79 ~~~~k~~V~~~G~Ip~LV~LL~s~--~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~Ga-----Ip~LV~LL~----s~~~ 147 (584)
T 3l6x_A 79 NDKVKTDVRKLKGIPVLVGLLDHP--KKEVHLGACGALKNISFGRDQDNKIAIKNCDG-----VPALVRLLR----KARD 147 (584)
T ss_dssp CHHHHHHHHHTTHHHHHHHGGGCS--SHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTH-----HHHHHHHHH----HCCS
T ss_pred ChHHHHHHHHcCCcHHHHHHHCCC--CHHHHHHHHHHHHHHHccCCHHHHHHHHHcCC-----HHHHHHHHc----CCCC
Confidence 456788899999999999997654 578999999999999987 7999888765332 344444443 3233
Q ss_pred chhHHHHHHHHHHHhccChhhHHHHHHH
Q psy13327 120 YPLRCSVLYCFLCYLYRNENNQAKIIAT 147 (154)
Q Consensus 120 f~lR~Aa~~c~kay~~~N~~~q~~~i~T 147 (154)
-.++-.|..|+... ..|++.+..+++.
T Consensus 148 ~~~~e~aa~aL~nL-S~~~~~k~~I~~~ 174 (584)
T 3l6x_A 148 MDLTEVITGTLWNL-SSHDSIKMEIVDH 174 (584)
T ss_dssp HHHHHHHHHHHHHH-TTSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHH-hCCchhhHHHHhc
Confidence 45566666666654 4478888877543
No 41
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=57.99 E-value=46 Score=29.73 Aligned_cols=38 Identities=16% Similarity=0.231 Sum_probs=32.6
Q ss_pred hcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHh
Q psy13327 51 SGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHEN 88 (154)
Q Consensus 51 ~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~n 88 (154)
.+++..++++.-.+..+..++-.|..|+|.+++.++..
T Consensus 710 ~~il~~L~~~l~~~~~~~~~~~~a~~~igrl~~~~~~~ 747 (852)
T 4fdd_A 710 PMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQE 747 (852)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHHhCHHH
Confidence 45788888888778889999999999999999998753
No 42
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=54.87 E-value=72 Score=26.96 Aligned_cols=24 Identities=25% Similarity=0.271 Sum_probs=20.7
Q ss_pred chHHHHHHHHhcHHHHHHHHhcCc
Q psy13327 41 VSSCQFVLQVSGILGSLCNLLMAA 64 (154)
Q Consensus 41 t~~nQ~~l~q~gll~~ll~Laf~~ 64 (154)
....|+.|..-|++..|+.+.-.+
T Consensus 280 ~r~RQkLlrEq~il~ll~~iL~~~ 303 (381)
T 1n4k_A 280 NRERQKLMREQNILKQIFKLLQAP 303 (381)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHGG
T ss_pred cHHHHHHHHhhChHHHHHHHHHhh
Confidence 456899999999999999998654
No 43
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=52.89 E-value=57 Score=30.52 Aligned_cols=70 Identities=11% Similarity=0.064 Sum_probs=46.1
Q ss_pred cHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHH
Q psy13327 52 GILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFL 131 (154)
Q Consensus 52 gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~k 131 (154)
.++..+++..- +-...+|..|+.+++.+..+.+. +-.+.+.-.|+..+.+.++ .+|.+|+.|+.
T Consensus 48 ~il~~Ll~~L~--d~~~~vR~~A~~~L~~l~~~~~~-------------~~~~~i~~~Ll~~l~d~~~-~vR~~a~~~L~ 111 (1230)
T 1u6g_C 48 KVVKMILKLLE--DKNGEVQNLAVKCLGPLVSKVKE-------------YQVETIVDTLCTNMLSDKE-QLRDISSIGLK 111 (1230)
T ss_dssp HHHHHHHHHTT--CSSHHHHHHHHHHHHHHHTTSCH-------------HHHHHHHHHHHHHTTCSSS-HHHHHHHHHHH
T ss_pred HHHHHHHHHhc--CCCHHHHHHHHHHHHHHHHhCCH-------------HHHHHHHHHHHHHhcCCcH-HHHHHHHHHHH
Confidence 45666666543 45778999999999999876433 1123444445555545444 67999999998
Q ss_pred HHhccC
Q psy13327 132 CYLYRN 137 (154)
Q Consensus 132 ay~~~N 137 (154)
.+...-
T Consensus 112 ~i~~~l 117 (1230)
T 1u6g_C 112 TVIGEL 117 (1230)
T ss_dssp HHHHHC
T ss_pred HHHHhC
Confidence 877543
No 44
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=49.34 E-value=93 Score=24.35 Aligned_cols=82 Identities=7% Similarity=0.136 Sum_probs=54.1
Q ss_pred HHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHh
Q psy13327 55 GSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYL 134 (154)
Q Consensus 55 ~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~ 134 (154)
..+.++.-+......++..|..++.-+-.+++.+.....+.-. -|.+ ..++.+ ..-++|..|+..+..--
T Consensus 11 ~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~-----Ip~L----V~lL~s-~~~~vq~~Aa~aL~nLa 80 (233)
T 3tt9_A 11 ERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRG-----ILKL----LQLLKV-QNEDVQRAVCGALRNLV 80 (233)
T ss_dssp HHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTH-----HHHH----HHGGGC-CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCC-----HHHH----HHHHcC-CCHHHHHHHHHHHHHHH
Confidence 3455555444433478888989999999899988877654322 2333 333333 34577888888888877
Q ss_pred ccChhhHHHHHH
Q psy13327 135 YRNENNQAKIIA 146 (154)
Q Consensus 135 ~~N~~~q~~~i~ 146 (154)
.+|++.+..+++
T Consensus 81 ~~~~~nk~~I~~ 92 (233)
T 3tt9_A 81 FEDNDNKLEVAE 92 (233)
T ss_dssp TTCHHHHHHHHH
T ss_pred hCCHHHHHHHHH
Confidence 778887777654
No 45
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=43.26 E-value=34 Score=25.57 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=42.4
Q ss_pred CCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhc
Q psy13327 65 GVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLY 135 (154)
Q Consensus 65 ~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~ 135 (154)
+-.-..|-+|+..++.++.|++.. . ......+...|...+.......+|.+|+.|+.....
T Consensus 26 s~~w~~R~~a~~~L~~l~~~~~~~-------~---~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~ 86 (242)
T 2qk2_A 26 EKKWTLRKESLEVLEKLLTDHPKL-------E---NGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAK 86 (242)
T ss_dssp CSSHHHHHHHHHHHHHHHHHCSSB-------C---CCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHccCCCC-------C---CCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 566789999999999999986432 1 112234555566655323467889999999998874
No 46
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=39.88 E-value=1.1e+02 Score=22.61 Aligned_cols=32 Identities=6% Similarity=0.184 Sum_probs=22.6
Q ss_pred cHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhc
Q psy13327 52 GILGSLCNLLMAAGVPACILTETINTVAEIIRS 84 (154)
Q Consensus 52 gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrg 84 (154)
.++..+..+ +.......||..|+.+++.+.++
T Consensus 56 ~i~~~L~~~-l~kd~~~~V~~~a~~~l~~la~~ 87 (242)
T 2qk2_A 56 ALVSALKKV-ITKDSNVVLVAMAGKCLALLAKG 87 (242)
T ss_dssp HHHHHHHHH-HHHCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hccCCCHHHHHHHHHHHHHHHHH
Confidence 344445444 33356788999999999999964
No 47
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=37.74 E-value=1e+02 Score=26.86 Aligned_cols=78 Identities=12% Similarity=0.133 Sum_probs=45.5
Q ss_pred HHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHH
Q psy13327 53 ILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLC 132 (154)
Q Consensus 53 ll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~ka 132 (154)
++..+.+..-.......+|..|+.++++++..-..+ +.. ...+..++-.+..... ....++|.+|+.||..
T Consensus 173 ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~---~~~-----~~~~~~il~~l~~~~~-~~~~~vr~~a~~~l~~ 243 (876)
T 1qgr_A 173 ILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKAN---FDK-----ESERHFIMQVVCEATQ-CPDTRVRVAALQNLVK 243 (876)
T ss_dssp HHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCHHH---HTS-----HHHHHHHHHHHHHHTT-CSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHH---HHh-----HHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHH
Confidence 444455544333335789999999999998643221 110 0001122223344343 3357899999999998
Q ss_pred HhccChh
Q psy13327 133 YLYRNEN 139 (154)
Q Consensus 133 y~~~N~~ 139 (154)
++..+++
T Consensus 244 l~~~~~~ 250 (876)
T 1qgr_A 244 IMSLYYQ 250 (876)
T ss_dssp HHHHSGG
T ss_pred HHHHhHH
Confidence 8877664
No 48
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=37.37 E-value=1.1e+02 Score=21.80 Aligned_cols=14 Identities=7% Similarity=0.164 Sum_probs=7.8
Q ss_pred hhhHHHHHHHHHHH
Q psy13327 68 ACILTETINTVAEI 81 (154)
Q Consensus 68 ~~Ir~eAL~t~adl 81 (154)
..||..|+.+++.+
T Consensus 95 ~~vr~~a~~aL~~~ 108 (211)
T 3ltm_A 95 GWVRQSAAVALGQI 108 (211)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 34556666655554
No 49
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=34.92 E-value=2.4e+02 Score=25.00 Aligned_cols=95 Identities=13% Similarity=0.058 Sum_probs=55.5
Q ss_pred HHHHHHhcHHHHHHHHhc------CcCCC-------------hhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHH
Q psy13327 45 QFVLQVSGILGSLCNLLM------AAGVP-------------ACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQA 105 (154)
Q Consensus 45 Q~~l~q~gll~~ll~Laf------~~~~p-------------~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~ 105 (154)
..-||.+|++-.|+.+.= ....+ .++...++.++.-+-.++....+.+..... -|.
T Consensus 112 ~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~-----l~~ 186 (684)
T 4gmo_A 112 CVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQT-----ILR 186 (684)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHH-----HHH
T ss_pred HHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhccc-----HHH
Confidence 355788888888877641 11111 012223444444455566666666554211 233
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHH
Q psy13327 106 IVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIA 146 (154)
Q Consensus 106 i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~ 146 (154)
++..|++ .+..+.+++.+|..|+...-.+|++.-..+.+
T Consensus 187 l~~~L~~--~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~ 225 (684)
T 4gmo_A 187 LLFRLIS--ADIAPQDIYEEAISCLTTLSEDNLKVGQAITD 225 (684)
T ss_dssp HHHHHHH--HCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHh--cCCCcHHHHHHHHHHHHHHhccCHHHHHHHHh
Confidence 3333332 35567899999999999999999886655543
No 50
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=31.59 E-value=53 Score=28.69 Aligned_cols=78 Identities=8% Similarity=0.163 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHH
Q psy13327 53 ILGSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLC 132 (154)
Q Consensus 53 ll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~ka 132 (154)
++..+....-.+.....||..|+.+++.++.-- .+.|.. ...++-+.-.|....++ ...++|.+|+.||..
T Consensus 180 ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~---~~~~~~-----~~~~~~ll~~l~~~~~~-~~~~~r~~a~~~l~~ 250 (861)
T 2bpt_A 180 ILIAIVQGAQSTETSKAVRLAALNALADSLIFI---KNNMER-----EGERNYLMQVVCEATQA-EDIEVQAAAFGCLCK 250 (861)
T ss_dssp HHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGC---HHHHTS-----HHHHHHHHHHHHHHHTC-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---HHHccC-----hhHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHH
Confidence 444444444333336789999999999986311 111110 00012222234444433 357899999999998
Q ss_pred HhccChh
Q psy13327 133 YLYRNEN 139 (154)
Q Consensus 133 y~~~N~~ 139 (154)
+...+++
T Consensus 251 l~~~~~~ 257 (861)
T 2bpt_A 251 IMSKYYT 257 (861)
T ss_dssp HHHHHGG
T ss_pred HHHHHHH
Confidence 8877654
No 51
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=30.68 E-value=19 Score=28.04 Aligned_cols=62 Identities=2% Similarity=-0.047 Sum_probs=39.5
Q ss_pred CChhhHHHHHHHHHH-HHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcchhHHHHHHHHHHHhc
Q psy13327 66 VPACILTETINTVAE-IIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYPLRCSVLYCFLCYLY 135 (154)
Q Consensus 66 ~p~~Ir~eAL~t~ad-lIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~ 135 (154)
..-.-|-+|+..++. ++.|++.... .......++-.|...+.......+|.+|+.|+..+..
T Consensus 28 ~~w~eRk~al~~L~~~~~~~~~~i~~--------~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~ 90 (249)
T 2qk1_A 28 SKWKDRVEALEEFWDSVLSQTKKLKS--------TSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICD 90 (249)
T ss_dssp SSHHHHHHHHHHHHHHTGGGCCCBCC--------TTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCcccc--------CcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHH
Confidence 345668899999999 8888654321 1222234444455555233356779999999988874
No 52
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=28.78 E-value=1.6e+02 Score=26.56 Aligned_cols=47 Identities=26% Similarity=0.257 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHhcCC-C-C--------CccchHHHHHHHHhcHHHHHHHHhcCcCCC
Q psy13327 21 ILALLKVIRSLVTPG-N-P--------AQVVSSCQFVLQVSGILGSLCNLLMAAGVP 67 (154)
Q Consensus 21 i~~~L~ivrllV~p~-n-~--------~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p 67 (154)
+.-+|+-+-.|+... | . +.--+--|+.|.+-+++..|+.|.-.+-.+
T Consensus 473 ~~~~L~dl~~F~~~~~n~~~~~l~~~~g~pnr~RQKLlREQ~il~~l~~iL~~~f~~ 529 (604)
T 3uj4_A 473 VTKLLEDLVYFVTGGTNSGQDVLEVVFSKPNRERQKLMREQNILKQIFKLLQAPFTD 529 (604)
T ss_dssp HHHHHHHHHHHCC---------------CCCHHHHHHHHHTTHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHhCcCcCccchhhcccCCcCHHHHHHHHhhhHHHHHHHHHhcccCC
Confidence 556677776777732 1 1 223467899999999999999999776554
No 53
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=25.72 E-value=2.1e+02 Score=23.84 Aligned_cols=42 Identities=14% Similarity=0.059 Sum_probs=28.1
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhhHHHHHHHh
Q psy13327 106 IVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENNQAKIIATL 148 (154)
Q Consensus 106 i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~q~~~i~Tl 148 (154)
+.--+...+.+++++ +|-+|+-|.---+.++||.-..|++.+
T Consensus 140 l~~~lk~~L~d~~py-VRk~A~l~~~kL~~~~pe~v~~~~~~l 181 (355)
T 3tjz_B 140 IERYMKQAIVDKVPS-VSSSALVSSLHLLKCSFDVVKRWVNEA 181 (355)
T ss_dssp HHHHHHHHHTCSSHH-HHHHHHHHHHHHTTTCHHHHHTTHHHH
T ss_pred HHHHHHHHcCCCCHH-HHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 444455566678787 577777776666788888777666543
No 54
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=24.87 E-value=2.2e+02 Score=26.75 Aligned_cols=110 Identities=12% Similarity=0.133 Sum_probs=66.7
Q ss_pred HHHHHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHh--HHHhhcccC
Q psy13327 20 NILALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNHEN--QEHFANVYA 97 (154)
Q Consensus 20 Ni~~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~n--Qe~fa~~~v 97 (154)
+.-+++.+-.+--.++|. +....|+.+.+.|....+.++.++. ...||..|..+++-++. ++.. |+.|-. .
T Consensus 576 ~feAL~ALTNLAs~~~n~--~E~~r~~Ii~~~ga~~~L~~LL~s~--n~~VrrAA~elI~NL~~-~~e~i~~k~~~~-~- 648 (778)
T 3opb_A 576 NYEALLALTNLASSETSD--GEEVCKHIVSTKVYWSTIENLMLDE--NVPLQRSTLELISNMMS-HPLTIAAKFFNL-E- 648 (778)
T ss_dssp HHHHHHHHHHHHHCCSHH--HHHHHHHHHHSHHHHHHHHHGGGCS--SHHHHHHHHHHHHHHHT-SGGGTGGGTSCC-S-
T ss_pred HHHHHHHHHHHhcCCccc--chHHHHHHHHhcCHHHHHHHHHhCC--CHHHHHHHHHHHHHHhC-CcHHHHHHHHhh-c-
Confidence 344555555555555432 1222344444469999999999875 34799999999999997 4443 444432 1
Q ss_pred CCCCChHH-HHHHHHHHhhcCCcchhHHHHHHHHHHHhccChhh
Q psy13327 98 PSDPPRQA-IVVLLMSMVNQKQSYPLRCSVLYCFLCYLYRNENN 140 (154)
Q Consensus 98 ps~p~~p~-i~vLLl~~~~s~~~f~lR~Aa~~c~kay~~~N~~~ 140 (154)
.++.. =+-+|+.+..+ ..+++|.||...+--.-..++..
T Consensus 649 ---~~~~~~rL~lLV~Ll~s-~D~~~r~AAagALAnLts~~~~i 688 (778)
T 3opb_A 649 ---NPQSLRNFNILVKLLQL-SDVESQRAVAAIFANIATTIPLI 688 (778)
T ss_dssp ---SHHHHHHHHHHHHGGGC-SCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ---CchhhccHHHHHHHHcC-CCHHHHHHHHHHHHHhcCCChHH
Confidence 12211 13345566644 57899999987665554556554
No 55
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=24.84 E-value=2.1e+02 Score=24.78 Aligned_cols=61 Identities=20% Similarity=0.196 Sum_probs=37.1
Q ss_pred ChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcC-CcchhHHHHHHHHHHHhccC
Q psy13327 67 PACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQK-QSYPLRCSVLYCFLCYLYRN 137 (154)
Q Consensus 67 p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~-~~f~lR~Aa~~c~kay~~~N 137 (154)
...+|..|+.+++++.+.... .|. |-.+.++..++....+. ..-++|.+++.|+......-
T Consensus 652 ~~~vr~~a~~~l~~l~~~~~~---~~~-------~~~~~l~~~l~~~l~~~~~~~~vr~~~~~~l~~l~~~~ 713 (861)
T 2bpt_A 652 DSPVSITAVGFIADISNSLEE---DFR-------RYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNI 713 (861)
T ss_dssp TSHHHHHHHHHHHHHHHHTGG---GGH-------HHHHHHHHHHHHHHHCTTCCTTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhch---hcc-------chHHHHHHHHHHHhCCccccHhhhHHHHHHHHHHHHHh
Confidence 345899999999999876532 221 11133444444444433 23578899988887665543
No 56
>3gae_A Protein DOA1; UFD3, CDC48, armadillo repeat, nucleus, phosphoprotein, UBL conjugation pathway, WD repeat, nuclear protein; 1.60A {Saccharomyces cerevisiae}
Probab=23.81 E-value=1.1e+02 Score=24.19 Aligned_cols=56 Identities=9% Similarity=0.100 Sum_probs=41.4
Q ss_pred cchHHHHHHHHHHHHHHHHHhcCCCCCccchHHHHHHHHhcHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCH
Q psy13327 12 GWSAQRESNILALLKVIRSLVTPGNPAQVVSSCQFVLQVSGILGSLCNLLMAAGVPACILTETINTVAEIIRSNH 86 (154)
Q Consensus 12 ~W~~Qk~~Ni~~~L~ivrllV~p~n~~~~t~~nQ~~l~q~gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~ 86 (154)
.|+ +..-+||+.|+++.-... ++++..++.-++.+ .|...+--++++++.+.....
T Consensus 67 ~WP-----~~fP~lDllRl~~~~~~~-------------~~~l~~~l~~~~~~-~~~~~~ml~lR~l~NlF~~~~ 122 (253)
T 3gae_A 67 NWE-----IKTPAYDIVRLIVKKLPY-------------SSDIKDYIEEGLGN-KNITLTMLTVRILVNCFNNEN 122 (253)
T ss_dssp HCS-----CCHHHHHHHHHHGGGCSC-------------GGGGHHHHHHHTTC-SSHHHHHHHHHHHHHHTTCTT
T ss_pred hCC-----ccchHHHHHHHHHcCCch-------------HHHHHHHHHHhcCC-CchhHHHHHHHHHHHcccCCc
Confidence 577 466799999999974411 13555566666664 477899999999999998766
No 57
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=23.72 E-value=1.2e+02 Score=25.61 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=35.1
Q ss_pred HHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHhHHHhhcc
Q psy13327 55 GSLCNLLMAAGVPACILTETINTVAEIIRSNHENQEHFANV 95 (154)
Q Consensus 55 ~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~ 95 (154)
..|-+|++....|.++|-.|-+++|-..|.||..-+.-...
T Consensus 71 ~lL~nL~~~~~~~~~~rE~aarII~ssLRNNP~Al~~V~~~ 111 (315)
T 3qml_C 71 ALLANLSLNENLPLTLRELSTRVITSCLRNNPPVVEFINES 111 (315)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhhccCChhHHHHHHHHHHHHHccCHHHHHHHHHh
Confidence 46677888777999999999999999999999988866653
No 58
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=23.13 E-value=1.5e+02 Score=25.52 Aligned_cols=35 Identities=17% Similarity=0.304 Sum_probs=23.3
Q ss_pred cHHHHHHHHhcCcCCChhhHHHHHHHHHHHHhcCHHh
Q psy13327 52 GILGSLCNLLMAAGVPACILTETINTVAEIIRSNHEN 88 (154)
Q Consensus 52 gll~~ll~Laf~~~~p~~Ir~eAL~t~adlIrgn~~n 88 (154)
.++..++++.- .....|+.+++.++.+++++++..
T Consensus 390 ~~v~~Ll~ll~--~~~~~v~~e~i~~l~~ii~~~p~~ 424 (591)
T 2vgl_B 390 RCVSTLLDLIQ--TKVNYVVQEAIVVIRDIFRKYPNK 424 (591)
T ss_dssp HHHHHHHHHHH--TCCHHHHHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHCcch
Confidence 34555555543 334567888888888888887754
No 59
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=20.45 E-value=4.5e+02 Score=23.24 Aligned_cols=84 Identities=10% Similarity=0.067 Sum_probs=57.7
Q ss_pred HHHHHHHHhcHHHHHHHHhcC-cCCChhhHHHHHHHHHHHHhcCHHhHHHhhcccCCCCCChHHHHHHHHHHhhcCCcch
Q psy13327 43 SCQFVLQVSGILGSLCNLLMA-AGVPACILTETINTVAEIIRSNHENQEHFANVYAPSDPPRQAIVVLLMSMVNQKQSYP 121 (154)
Q Consensus 43 ~nQ~~l~q~gll~~ll~Laf~-~~~p~~Ir~eAL~t~adlIrgn~~nQe~fa~~~vps~p~~p~i~vLLl~~~~s~~~f~ 121 (154)
..-..+.+.|.+-.++.+..+ ...|..|+..|+.++..+-.+|...-+.+..-.. ..++.+++.+..+..+
T Consensus 173 ~~~~~v~~~~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~------~~~~~~ll~~~~~~~~-- 244 (684)
T 4gmo_A 173 EIHEAVATKQTILRLLFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQE------THVYDVLLKLATGTDP-- 244 (684)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCS------SCHHHHHHHHHHSSCT--
T ss_pred HHHHHHHhcccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcch------HHHHHHHHHHhcCCcH--
Confidence 344556677777777777766 4689999999999999999999988777765222 2345555555544433
Q ss_pred hHHHHHHHHHHHh
Q psy13327 122 LRCSVLYCFLCYL 134 (154)
Q Consensus 122 lR~Aa~~c~kay~ 134 (154)
.|..++..+.-.+
T Consensus 245 ~~~la~giL~Ni~ 257 (684)
T 4gmo_A 245 RAVMACGVLHNVF 257 (684)
T ss_dssp THHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHh
Confidence 3666776666544
Done!