Your job contains 1 sequence.
>psy1333
MVTQSDTNNVPRAMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGIVVDKHSTGGVG
DKVSIPLVPALAACGLKPS
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1333
(79 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|C9JGI3 - symbol:TYMP "Thymidine phosphorylase" ... 185 1.1e-13 1
MGI|MGI:1920212 - symbol:Tymp "thymidine phosphorylase" s... 185 1.2e-13 1
UNIPROTKB|P19971 - symbol:TYMP "Thymidine phosphorylase" ... 185 1.3e-13 1
RGD|1305756 - symbol:Tymp "thymidine phosphorylase" speci... 183 2.0e-13 1
UNIPROTKB|Q5FVR2 - symbol:Tymp "Thymidine phosphorylase" ... 183 2.0e-13 1
TIGR_CMR|CPS_1970 - symbol:CPS_1970 "thymidine phosphoryl... 181 2.8e-13 1
TIGR_CMR|SO_1218 - symbol:SO_1218 "thymidine phosphorylas... 160 5.5e-11 1
TIGR_CMR|SPO_2929 - symbol:SPO_2929 "thymidine phosphoryl... 158 8.8e-11 1
UNIPROTKB|Q3ABU8 - symbol:pdp "Pyrimidine-nucleoside phos... 155 1.9e-10 1
TIGR_CMR|CHY_1554 - symbol:CHY_1554 "pyrimidine-nucleosid... 155 1.9e-10 1
UNIPROTKB|Q9KPL8 - symbol:deoA "Thymidine phosphorylase" ... 155 2.0e-10 1
TIGR_CMR|VC_2349 - symbol:VC_2349 "thymidine phosphorylas... 155 2.0e-10 1
UNIPROTKB|P07650 - symbol:deoA species:83333 "Escherichia... 153 3.1e-10 1
TIGR_CMR|BA_1894 - symbol:BA_1894 "pyrimidine-nucleoside ... 148 1.1e-09 1
TIGR_CMR|BA_4307 - symbol:BA_4307 "pyrimidine-nucleoside ... 141 6.1e-09 1
>UNIPROTKB|C9JGI3 [details] [associations]
symbol:TYMP "Thymidine phosphorylase" species:9606 "Homo
sapiens" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0016763 "transferase activity, transferring pentosyl groups"
evidence=IEA] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
SMART:SM00941 Pfam:PF02885 GO:GO:0006206 GO:GO:0016763 EMBL:U62317
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 HOGENOM:HOG000047313
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
HGNC:HGNC:3148 IPI:IPI00853163 ProteinModelPortal:C9JGI3 SMR:C9JGI3
STRING:C9JGI3 PRIDE:C9JGI3 Ensembl:ENST00000425169
ArrayExpress:C9JGI3 Bgee:C9JGI3 Uniprot:C9JGI3
Length = 445
Score = 185 (70.2 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGI---VVDKHSTGGVGDKVSIPLVP 69
AMLMA+ + G+ EET LT+++ SG+ L W PE +VDKHSTGGVGDKVS+ L P
Sbjct: 73 AMLMAIRLRGMDLEETSVLTQALAQSGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAP 131
Query: 70 ALAACGLK 77
ALAACG K
Sbjct: 132 ALAACGCK 139
>MGI|MGI:1920212 [details] [associations]
symbol:Tymp "thymidine phosphorylase" species:10090 "Mus
musculus" [GO:0004645 "phosphorylase activity" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0006935 "chemotaxis" evidence=TAS] [GO:0008152 "metabolic
process" evidence=TAS] [GO:0009032 "thymidine phosphorylase
activity" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0016154 "pyrimidine-nucleoside phosphorylase
activity" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=IEA] [GO:0016763 "transferase activity,
transferring pentosyl groups" evidence=IEA] UniPathway:UPA00578
InterPro:IPR000053 InterPro:IPR000312 InterPro:IPR013102
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
SMART:SM00941 Pfam:PF02885 MGI:MGI:1920212 GO:GO:0006206
GO:GO:0006935 GO:GO:0009887 GO:GO:0006213 GO:GO:0004645
UniGene:Mm.287977 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313
KO:K00758 GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30
PANTHER:PTHR10515 SUPFAM:SSF54680 TIGRFAMs:TIGR02644 CTD:1890
HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP EMBL:AB060274 IPI:IPI00118064
RefSeq:NP_612175.1 ProteinModelPortal:Q99N42 SMR:Q99N42
STRING:Q99N42 PhosphoSite:Q99N42 PRIDE:Q99N42 DNASU:72962
Ensembl:ENSMUST00000023285 GeneID:72962 KEGG:mmu:72962
UCSC:uc007xgl.2 GeneTree:ENSGT00390000009250 InParanoid:Q99N42
OMA:MDNPLGR SABIO-RK:Q99N42 BindingDB:Q99N42 ChEMBL:CHEMBL2606
NextBio:337237 Bgee:Q99N42 CleanEx:MM_TYMP Genevestigator:Q99N42
GermOnline:ENSMUSG00000022615 Uniprot:Q99N42
Length = 471
Score = 185 (70.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGI---VVDKHSTGGVGDKVSIPLVP 69
AMLMA+ + G+ EET LT+++ +SG+ L W P+ +VDKHSTGGVGDKVS+ L P
Sbjct: 59 AMLMAIRLQGMNLEETSVLTRALAESGQQLEW-PKAWHQQLVDKHSTGGVGDKVSLVLAP 117
Query: 70 ALAACGLK 77
ALAACG K
Sbjct: 118 ALAACGCK 125
>UNIPROTKB|P19971 [details] [associations]
symbol:TYMP "Thymidine phosphorylase" species:9606 "Homo
sapiens" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0008083 "growth factor activity"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0009032 "thymidine phosphorylase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=TAS]
[GO:0005161 "platelet-derived growth factor receptor binding"
evidence=TAS] [GO:0006220 "pyrimidine nucleotide metabolic process"
evidence=TAS] [GO:0006260 "DNA replication" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006206 "pyrimidine
nucleobase metabolic process" evidence=TAS] [GO:0016763
"transferase activity, transferring pentosyl groups" evidence=EXP]
[GO:0043097 "pyrimidine nucleoside salvage" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046135 "pyrimidine nucleoside catabolic process" evidence=TAS]
[GO:0055086 "nucleobase-containing small molecule metabolic
process" evidence=TAS] UniPathway:UPA00578 Reactome:REACT_111217
InterPro:IPR000053 InterPro:IPR000312 InterPro:IPR013102
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0005829 GO:GO:0030154 GO:GO:0006260 GO:GO:0006206
GO:GO:0046135 GO:GO:0001525 GO:GO:0006935 GO:GO:0000002 EMBL:U62317
DrugBank:DB01248 DrugBank:DB01101 GO:GO:0043097 UniGene:Hs.730607
DrugBank:DB00544 DrugBank:DB00675 GO:GO:0006220 Orphanet:298
GO:GO:0005161 GO:GO:0004645 UniGene:Hs.180903 DrugBank:DB00795
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 EMBL:M63193 EMBL:AK225269
EMBL:BC018160 EMBL:BC052211 IPI:IPI00292858 PIR:S03904
RefSeq:NP_001107227.1 RefSeq:NP_001107228.1 RefSeq:NP_001244917.1
RefSeq:NP_001244918.1 RefSeq:NP_001944.1 PDB:1UOU PDB:2J0F PDB:2WK5
PDB:2WK6 PDBsum:1UOU PDBsum:2J0F PDBsum:2WK5 PDBsum:2WK6
ProteinModelPortal:P19971 SMR:P19971 IntAct:P19971 STRING:P19971
PhosphoSite:P19971 DMDM:67477361 OGP:P19971 PaxDb:P19971
PRIDE:P19971 DNASU:1890 Ensembl:ENST00000252029
Ensembl:ENST00000395678 Ensembl:ENST00000395680
Ensembl:ENST00000395681 GeneID:1890 KEGG:hsa:1890 UCSC:uc003bmb.4
CTD:1890 GeneCards:GC22M050964 HGNC:HGNC:3148 HPA:CAB002518
HPA:HPA001072 MIM:131222 MIM:603041 neXtProt:NX_P19971
PharmGKB:PA162407502 HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP
PhylomeDB:P19971 BRENDA:2.4.2.4 SABIO-RK:P19971 BindingDB:P19971
ChEMBL:CHEMBL3106 DrugBank:DB00322 EvolutionaryTrace:P19971
GenomeRNAi:1890 NextBio:7707 ArrayExpress:P19971 Bgee:P19971
CleanEx:HS_TYMP Genevestigator:P19971 GermOnline:ENSG00000025708
Uniprot:P19971
Length = 482
Score = 185 (70.2 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGI---VVDKHSTGGVGDKVSIPLVP 69
AMLMA+ + G+ EET LT+++ SG+ L W PE +VDKHSTGGVGDKVS+ L P
Sbjct: 73 AMLMAIRLRGMDLEETSVLTQALAQSGQQLEW-PEAWRQQLVDKHSTGGVGDKVSLVLAP 131
Query: 70 ALAACGLK 77
ALAACG K
Sbjct: 132 ALAACGCK 139
>RGD|1305756 [details] [associations]
symbol:Tymp "thymidine phosphorylase" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004645 "phosphorylase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006206 "pyrimidine
nucleobase metabolic process" evidence=IEA] [GO:0006213 "pyrimidine
nucleoside metabolic process" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0009032 "thymidine
phosphorylase activity" evidence=IEA] [GO:0016154
"pyrimidine-nucleoside phosphorylase activity" evidence=IEA]
UniPathway:UPA00578 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 SMART:SM00941 Pfam:PF02885 RGD:1305756
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
HOGENOM:HOG000047313 KO:K00758 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 CTD:1890 HOVERGEN:HBG000082 OrthoDB:EOG4DJJWP
GeneTree:ENSGT00390000009250 OMA:MDNPLGR EMBL:BC089830
IPI:IPI00361478 RefSeq:NP_001012122.1 UniGene:Rn.219088 HSSP:P19971
ProteinModelPortal:Q5FVR2 SMR:Q5FVR2 STRING:Q5FVR2
PhosphoSite:Q5FVR2 PRIDE:Q5FVR2 Ensembl:ENSRNOT00000040541
GeneID:315219 KEGG:rno:315219 InParanoid:Q5FVR2
ChEMBL:CHEMBL1075244 NextBio:668926 ArrayExpress:Q5FVR2
Genevestigator:Q5FVR2 Uniprot:Q5FVR2
Length = 476
Score = 183 (69.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGI---VVDKHSTGGVGDKVSIPLVP 69
AMLMA+ + G+ EET LT+++ +SG+ L W P+ +VDKHSTGGVGDKVS+ L P
Sbjct: 66 AMLMAIRLQGMDLEETSVLTQALAESGQQLEW-PKAWHQQLVDKHSTGGVGDKVSLVLAP 124
Query: 70 ALAACGLK 77
ALAACG K
Sbjct: 125 ALAACGCK 132
>UNIPROTKB|Q5FVR2 [details] [associations]
symbol:Tymp "Thymidine phosphorylase" species:10116 "Rattus
norvegicus" [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=IEA]
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=IEA]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=IEA] UniPathway:UPA00578 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 SMART:SM00941
Pfam:PF02885 RGD:1305756 GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 CTD:1890 HOVERGEN:HBG000082
OrthoDB:EOG4DJJWP GeneTree:ENSGT00390000009250 OMA:MDNPLGR
EMBL:BC089830 IPI:IPI00361478 RefSeq:NP_001012122.1
UniGene:Rn.219088 HSSP:P19971 ProteinModelPortal:Q5FVR2 SMR:Q5FVR2
STRING:Q5FVR2 PhosphoSite:Q5FVR2 PRIDE:Q5FVR2
Ensembl:ENSRNOT00000040541 GeneID:315219 KEGG:rno:315219
InParanoid:Q5FVR2 ChEMBL:CHEMBL1075244 NextBio:668926
ArrayExpress:Q5FVR2 Genevestigator:Q5FVR2 Uniprot:Q5FVR2
Length = 476
Score = 183 (69.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 39/68 (57%), Positives = 50/68 (73%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGI---VVDKHSTGGVGDKVSIPLVP 69
AMLMA+ + G+ EET LT+++ +SG+ L W P+ +VDKHSTGGVGDKVS+ L P
Sbjct: 66 AMLMAIRLQGMDLEETSVLTQALAESGQQLEW-PKAWHQQLVDKHSTGGVGDKVSLVLAP 124
Query: 70 ALAACGLK 77
ALAACG K
Sbjct: 125 ALAACGCK 132
>TIGR_CMR|CPS_1970 [details] [associations]
symbol:CPS_1970 "thymidine phosphorylase" species:167879
"Colwellia psychrerythraea 34H" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0006206
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 RefSeq:YP_268700.1 ProteinModelPortal:Q483R6
SMR:Q483R6 STRING:Q483R6 GeneID:3520590 KEGG:cps:CPS_1970
PATRIC:21467071 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
OMA:VARETHV ProtClustDB:PRK05820
BioCyc:CPSY167879:GI48-2040-MONOMER GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 Uniprot:Q483R6
Length = 438
Score = 181 (68.8 bits), Expect = 2.8e-13, P = 2.8e-13
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSW-GPEGIVVDKHSTGGVGDKVSIPLVPAL 71
AM MA+F G++ +E + TK+M+ SGE LSW G +G +VDKHSTGGVGDKVS L +
Sbjct: 46 AMAMAIFQQGMSIDERVNFTKAMMRSGEVLSWEGFDGPIVDKHSTGGVGDKVSFMLAAIV 105
Query: 72 AACG 75
AACG
Sbjct: 106 AACG 109
>TIGR_CMR|SO_1218 [details] [associations]
symbol:SO_1218 "thymidine phosphorylase" species:211586
"Shewanella oneidensis MR-1" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0006206
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR
RefSeq:NP_716841.1 ProteinModelPortal:Q8EHK3 SMR:Q8EHK3
GeneID:1169045 KEGG:son:SO_1218 PATRIC:23522094 Uniprot:Q8EHK3
Length = 443
Score = 160 (61.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP---EGIVVDKHSTGGVGDKVSIPLVP 69
A+ MA++ N + +E IALT +M DSG L+W G V+DKHSTGGVGD +S+ L P
Sbjct: 41 ALGMAVYFNDMNMDERIALTTAMRDSGTVLNWQSLNLNGPVIDKHSTGGVGDVISLMLGP 100
Query: 70 ALAACG 75
AACG
Sbjct: 101 MAAACG 106
>TIGR_CMR|SPO_2929 [details] [associations]
symbol:SPO_2929 "thymidine phosphorylase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=ISS] [GO:0009032 "thymidine
phosphorylase activity" evidence=ISS] InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 HOGENOM:HOG000047313 KO:K00758 ProtClustDB:PRK05820
GO:GO:0016154 GO:GO:0009032 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_168137.1
ProteinModelPortal:Q5LPB9 GeneID:3195037 KEGG:sil:SPO2929
PATRIC:23379287 Uniprot:Q5LPB9
Length = 436
Score = 158 (60.7 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 33/63 (52%), Positives = 42/63 (66%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGPEGIVVDKHSTGGVGDKVSIPLVPALA 72
A M + + L +E ALT +M D+G+ L W +G V+DKHSTGGVGD VS+ L PALA
Sbjct: 40 AFAMGVCMGRLGSEGRAALTLAMRDTGDVLHWDFDGPVIDKHSTGGVGDCVSLVLAPALA 99
Query: 73 ACG 75
CG
Sbjct: 100 ECG 102
>UNIPROTKB|Q3ABU8 [details] [associations]
symbol:pdp "Pyrimidine-nucleoside phosphorylase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_360386.1
ProteinModelPortal:Q3ABU8 SMR:Q3ABU8 STRING:Q3ABU8 GeneID:3728433
KEGG:chy:CHY_1554 PATRIC:21276235 HOGENOM:HOG000047312 KO:K00756
BioCyc:CHYD246194:GJCN-1553-MONOMER Uniprot:Q3ABU8
Length = 442
Score = 155 (59.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP-EGIVVDKHSTGGVGDKVSIPLVPAL 71
A LMA++ G+ +EE LT +MV+SG+ + GI VDKHSTGGVGDK ++ L P +
Sbjct: 40 AFLMAVYFQGMDDEEVADLTMAMVESGDKVDLSAISGIKVDKHSTGGVGDKTTLVLAPLV 99
Query: 72 AACGL 76
AA G+
Sbjct: 100 AAVGV 104
>TIGR_CMR|CHY_1554 [details] [associations]
symbol:CHY_1554 "pyrimidine-nucleoside phosphorylase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006213 "pyrimidine nucleoside metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006206 GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10
InterPro:IPR017459 SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213
GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02644 OMA:LMAIYFR RefSeq:YP_360386.1
ProteinModelPortal:Q3ABU8 SMR:Q3ABU8 STRING:Q3ABU8 GeneID:3728433
KEGG:chy:CHY_1554 PATRIC:21276235 HOGENOM:HOG000047312 KO:K00756
BioCyc:CHYD246194:GJCN-1553-MONOMER Uniprot:Q3ABU8
Length = 442
Score = 155 (59.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP-EGIVVDKHSTGGVGDKVSIPLVPAL 71
A LMA++ G+ +EE LT +MV+SG+ + GI VDKHSTGGVGDK ++ L P +
Sbjct: 40 AFLMAVYFQGMDDEEVADLTMAMVESGDKVDLSAISGIKVDKHSTGGVGDKTTLVLAPLV 99
Query: 72 AACGL 76
AA G+
Sbjct: 100 AAVGV 104
>UNIPROTKB|Q9KPL8 [details] [associations]
symbol:deoA "Thymidine phosphorylase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0009032 "thymidine phosphorylase activity" evidence=ISS]
UniPathway:UPA00578 HAMAP:MF_01628 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR013465
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0006206 GO:GO:0006139 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR PIR:E82087
RefSeq:NP_231979.2 ProteinModelPortal:Q9KPL8 SMR:Q9KPL8
DNASU:2613145 GeneID:2613145 KEGG:vch:VC2349 PATRIC:20083723
Uniprot:Q9KPL8
Length = 448
Score = 155 (59.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP---EGIVVDKHSTGGVGDKVSIPLVP 69
A MA+F +T E IALT +M DSG + W +G +VDKHSTGGVGD S+ L P
Sbjct: 47 AFAMAIFFREMTMPERIALTCAMRDSGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGP 106
Query: 70 ALAACG 75
+AACG
Sbjct: 107 MVAACG 112
>TIGR_CMR|VC_2349 [details] [associations]
symbol:VC_2349 "thymidine phosphorylase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0009032 "thymidine phosphorylase activity" evidence=ISS]
UniPathway:UPA00578 HAMAP:MF_01628 InterPro:IPR000053
InterPro:IPR000312 InterPro:IPR013102 InterPro:IPR013465
InterPro:IPR017872 InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831
PIRSF:PIRSF000478 PROSITE:PS00647 SMART:SM00941 Pfam:PF02885
GO:GO:0006206 GO:GO:0006139 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006213 GO:GO:0004645 Gene3D:3.40.1030.10 InterPro:IPR017459
SUPFAM:SSF47648 SUPFAM:SSF52418 eggNOG:COG0213 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 OMA:LMAIYFR PIR:E82087
RefSeq:NP_231979.2 ProteinModelPortal:Q9KPL8 SMR:Q9KPL8
DNASU:2613145 GeneID:2613145 KEGG:vch:VC2349 PATRIC:20083723
Uniprot:Q9KPL8
Length = 448
Score = 155 (59.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 34/66 (51%), Positives = 42/66 (63%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP---EGIVVDKHSTGGVGDKVSIPLVP 69
A MA+F +T E IALT +M DSG + W +G +VDKHSTGGVGD S+ L P
Sbjct: 47 AFAMAIFFREMTMPERIALTCAMRDSGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGP 106
Query: 70 ALAACG 75
+AACG
Sbjct: 107 MVAACG 112
>UNIPROTKB|P07650 [details] [associations]
symbol:deoA species:83333 "Escherichia coli K-12"
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0016763 "transferase activity, transferring pentosyl groups"
evidence=IEA] [GO:0016154 "pyrimidine-nucleoside phosphorylase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0006213 "pyrimidine nucleoside metabolic process"
evidence=IEA] [GO:0006206 "pyrimidine nucleobase metabolic process"
evidence=IEA] [GO:0004645 "phosphorylase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0009032 "thymidine
phosphorylase activity" evidence=IEA] UniPathway:UPA00578
HAMAP:MF_01628 InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR013465 InterPro:IPR017872
InterPro:IPR018090 Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478
PROSITE:PS00647 SMART:SM00941 Pfam:PF02885 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006206 GO:GO:0006974 EMBL:U14003
EMBL:X00742 EMBL:X03224 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 eggNOG:COG0213 HOGENOM:HOG000047313 KO:K00758
ProtClustDB:PRK05820 GO:GO:0016154 GO:GO:0009032
Gene3D:3.90.1170.30 PANTHER:PTHR10515 SUPFAM:SSF54680
TIGRFAMs:TIGR02643 TIGRFAMs:TIGR02644 PIR:S56606 RefSeq:NP_418799.1
RefSeq:YP_492512.1 PDB:1AZY PDB:1OTP PDB:1TPT PDB:2TPT PDBsum:1AZY
PDBsum:1OTP PDBsum:1TPT PDBsum:2TPT ProteinModelPortal:P07650
SMR:P07650 DIP:DIP-9426N IntAct:P07650 PRIDE:P07650
EnsemblBacteria:EBESCT00000000226 EnsemblBacteria:EBESCT00000017997
GeneID:12933785 GeneID:948901 KEGG:ecj:Y75_p4266 KEGG:eco:b4382
PATRIC:32124380 EchoBASE:EB0215 EcoGene:EG10219 OMA:LMAIYFR
BioCyc:EcoCyc:DEOA-MONOMER BioCyc:ECOL316407:JW4345-MONOMER
BioCyc:MetaCyc:DEOA-MONOMER BindingDB:P07650 ChEMBL:CHEMBL3726
EvolutionaryTrace:P07650 Genevestigator:P07650 Uniprot:P07650
Length = 440
Score = 153 (58.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP---EGIVVDKHSTGGVGDKVSIPLVP 69
A+ M +F + +T E ++LT +M DSG L W G +VDKHSTGGVGD S+ L P
Sbjct: 41 ALAMTIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGP 100
Query: 70 ALAACG 75
+AACG
Sbjct: 101 MVAACG 106
>TIGR_CMR|BA_1894 [details] [associations]
symbol:BA_1894 "pyrimidine-nucleoside phosphorylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 OMA:LMAIYFR HOGENOM:HOG000047312
KO:K00756 HSSP:P77836 ProtClustDB:PRK06078 RefSeq:NP_844305.1
RefSeq:YP_018538.1 RefSeq:YP_028020.1 ProteinModelPortal:Q81RZ1
SMR:Q81RZ1 DNASU:1086440 EnsemblBacteria:EBBACT00000008544
EnsemblBacteria:EBBACT00000014934 EnsemblBacteria:EBBACT00000023229
GeneID:1086440 GeneID:2816973 GeneID:2851407 KEGG:ban:BA_1894
KEGG:bar:GBAA_1894 KEGG:bat:BAS1756
BioCyc:BANT260799:GJAJ-1825-MONOMER
BioCyc:BANT261594:GJ7F-1899-MONOMER Uniprot:Q81RZ1
Length = 433
Score = 148 (57.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/62 (51%), Positives = 42/62 (67%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP-EGIVVDKHSTGGVGDKVSIPLVPAL 71
A+ MA+F +T+ E LT +MV+SGET+ EGI VDKHSTGGVGD ++ L P +
Sbjct: 40 ALAMAIFFKDMTDRERADLTMAMVESGETIDLSAIEGIKVDKHSTGGVGDTTTLVLGPLV 99
Query: 72 AA 73
AA
Sbjct: 100 AA 101
>TIGR_CMR|BA_4307 [details] [associations]
symbol:BA_4307 "pyrimidine-nucleoside phosphorylase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0016154 "pyrimidine-nucleoside phosphorylase activity"
evidence=ISS] InterPro:IPR000053 InterPro:IPR000312
InterPro:IPR013102 InterPro:IPR017872 InterPro:IPR018090
Pfam:PF00591 Pfam:PF07831 PIRSF:PIRSF000478 PROSITE:PS00647
SMART:SM00941 Pfam:PF02885 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006206 GO:GO:0006213 GO:GO:0004645
Gene3D:3.40.1030.10 InterPro:IPR017459 SUPFAM:SSF47648
SUPFAM:SSF52418 GO:GO:0016154 Gene3D:3.90.1170.30 PANTHER:PTHR10515
SUPFAM:SSF54680 TIGRFAMs:TIGR02644 HOGENOM:HOG000047312 KO:K00756
RefSeq:NP_846540.1 RefSeq:YP_020952.1 RefSeq:YP_030245.1
HSSP:P77836 ProteinModelPortal:Q81ME2 SMR:Q81ME2 IntAct:Q81ME2
DNASU:1087465 EnsemblBacteria:EBBACT00000012693
EnsemblBacteria:EBBACT00000017985 EnsemblBacteria:EBBACT00000020465
GeneID:1087465 GeneID:2820098 GeneID:2849826 KEGG:ban:BA_4307
KEGG:bar:GBAA_4307 KEGG:bat:BAS3995 OMA:SEEIQFF
ProtClustDB:PRK06078 BioCyc:BANT260799:GJAJ-4052-MONOMER
BioCyc:BANT261594:GJ7F-4191-MONOMER Uniprot:Q81ME2
Length = 434
Score = 141 (54.7 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 13 AMLMAMFINGLTNEETIALTKSMVDSGETLSWGP-EGIVVDKHSTGGVGDKVSIPLVPAL 71
++ MA+F + ++E LT +MV+SG+T+ EG+ VDKHSTGGVGD ++ L P +
Sbjct: 40 SLAMAIFFQDMNDQERADLTMAMVNSGDTIDLSAIEGVKVDKHSTGGVGDITTLVLGPLV 99
Query: 72 AACGL 76
AA G+
Sbjct: 100 AALGV 104
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.130 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 79 79 0.00091 102 3 11 23 0.45 29
29 0.39 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 513 (55 KB)
Total size of DFA: 89 KB (2066 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.78u 0.17s 8.95t Elapsed: 00:00:01
Total cpu time: 8.78u 0.17s 8.95t Elapsed: 00:00:01
Start: Thu Aug 15 12:19:22 2013 End: Thu Aug 15 12:19:23 2013