BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13333
(114 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94887|NRX4_DROME Neurexin-4 OS=Drosophila melanogaster GN=Nrx-IV PE=1 SV=2
Length = 1284
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 84/114 (73%), Positives = 104/114 (91%)
Query: 1 HLRVVFDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDS 60
HLR VFDFGFERQE+IFP KHFGLGQYHD+ RKN G+T++++VD+YEP E++F+IK S
Sbjct: 1062 HLRCVFDFGFERQEIIFPKKHFGLGQYHDMHFMRKNGGSTVVLKVDNYEPVEYNFDIKAS 1121
Query: 61 ADAQFNNIQYMYIGRNESMTEGFIGCVSRVEFDDIYPLKLLFQEDGPANVRSIG 114
ADAQFNNIQYMYIG+NESMT+GF+GCVSRV+FDDIYPLKL+FQ++ P NV+S+G
Sbjct: 1122 ADAQFNNIQYMYIGKNESMTDGFVGCVSRVQFDDIYPLKLMFQQNPPKNVKSLG 1175
>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1
SV=1
Length = 1331
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 18/127 (14%)
Query: 2 LRVVFDFGFERQ--ELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKD 59
L++ ++ G R+ + +++ GQ H + I R T+ +++D Y +H +
Sbjct: 1085 LQIRYNLGGTREPYNIDVDHRNMANGQPHSVNITRHEK--TIFLKLDHYPSVSYH--LPS 1140
Query: 60 SADAQFNNIQYMYIGR-----------NESMTEGFIGCVSRVEFDDIYPLK-LLFQEDGP 107
S+D FN+ + +++G+ ++ T GF GC+SRV+F+ I PLK L Q +
Sbjct: 1141 SSDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNAS 1200
Query: 108 ANVRSIG 114
A+V G
Sbjct: 1201 AHVHIQG 1207
>sp|Q9CPW0|CNTP2_MOUSE Contactin-associated protein-like 2 OS=Mus musculus GN=Cntnap2 PE=1
SV=2
Length = 1332
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 1 HLRVVFDFGFERQELIFPNKHFGL--GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIK 58
+L++ ++ G R+ H + GQ H + I R T+++++D Y +H +
Sbjct: 1085 NLQIRYNLGGTREPFNIDVDHRNMANGQPHSVNITRHER--TIILKLDHYPAVGYH--LP 1140
Query: 59 DSADAQFNNIQYMYIGR-----------NESMTEGFIGCVSRVEFDDIYPLK-LLFQEDG 106
S+D FN+ + +++G+ ++ T GF GC+SRV+F+ I PLK L Q +
Sbjct: 1141 SSSDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNHIAPLKAALRQTNA 1200
Query: 107 PANVRSIG 114
A+V G
Sbjct: 1201 SAHVHIQG 1208
>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo abelii GN=CNTNAP2 PE=2
SV=1
Length = 1331
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 2 LRVVFDFGFERQELIFPNKHFGL--GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKD 59
L++ ++ G R+ H + GQ H + R T+++++D Y +H +
Sbjct: 1085 LQIRYNLGGTREPYNIDTDHRNMANGQPHSVNNTRHEK--TIILKLDHYPSVSYH--LPS 1140
Query: 60 SADAQFNNIQYMYIGR-----------NESMTEGFIGCVSRVEFDDIYPLK-LLFQEDGP 107
S+D FN+ + +++G+ ++ T GF GC+SRV+F+ I PLK L Q +
Sbjct: 1141 SSDTLFNSPKSLFLGKVIETGKIDQEIHKYNTPGFTGCLSRVQFNQIAPLKAALRQTNAS 1200
Query: 108 ANVRSIG 114
A+V G
Sbjct: 1201 AHVHIQG 1207
>sp|Q9BZ76|CNTP3_HUMAN Contactin-associated protein-like 3 OS=Homo sapiens GN=CNTNAP3 PE=2
SV=3
Length = 1288
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 17 FPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR- 75
F K+ GQ H ++I R+ A ++++V+ K+ S+ +FN ++ + +G+
Sbjct: 1093 FDFKNMADGQLHQVKINREE--AVVMVEVNQSTKKQVIL----SSGTEFNAVKSLILGKV 1146
Query: 76 ----------NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGPANV 110
+ T GF GC+S V F PLK + GP+ V
Sbjct: 1147 LEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRV 1191
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 22 FGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGRNESMTE 81
F Q+H +R R GA+L QVD K Q N+ ++IG +
Sbjct: 871 FNDNQWHHVRAERNVKGASL--QVDQLPQKMQPAPADGHVRLQLNS--QLFIGGTATRQR 926
Query: 82 GFIGCVSRVEFDDI 95
GF+GC+ ++ + +
Sbjct: 927 GFLGCIRSLQLNGV 940
>sp|Q96NU0|CNT3B_HUMAN Contactin-associated protein-like 3B OS=Homo sapiens GN=CNTNAP3B PE=2
SV=2
Length = 1288
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 17/105 (16%)
Query: 17 FPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR- 75
F K+ GQ H ++I R+ A ++++V+ K+ S+ +FN ++ + +G+
Sbjct: 1093 FDFKNMADGQLHQVKINREE--AVVMVEVNQSAKKQVIL----SSGTEFNAVKSLILGKV 1146
Query: 76 ----------NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGPANV 110
+ T GF GC+S V F PLK + GP+ V
Sbjct: 1147 LEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRV 1191
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Query: 22 FGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGRNESMTE 81
F Q+H +R R GA+L QVD K Q N+ ++IG +
Sbjct: 871 FNDNQWHHVRAERNVKGASL--QVDQLPQKMQPAPADGHVRLQLNS--QLFIGGTATRQR 926
Query: 82 GFIGCVSRVEFDDI 95
GF+GC+ ++ + +
Sbjct: 927 GFLGCIRSLQLNGV 940
>sp|P78357|CNTP1_HUMAN Contactin-associated protein 1 OS=Homo sapiens GN=CNTNAP1 PE=1 SV=1
Length = 1384
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 25 GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR--------- 75
GQ H I I R L +QVD + E F++ D+Q ++ + +Y+GR
Sbjct: 1141 GQPHSINITRVYR--NLFIQVDYFPLTEQKFSLL--VDSQLDSPKALYLGRVMETGVIDP 1196
Query: 76 --NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGP 107
T GF GC+S V F+++ PLK F+ P
Sbjct: 1197 EIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRP 1230
>sp|P97846|CNTP1_RAT Contactin-associated protein 1 OS=Rattus norvegicus GN=Cntnap1 PE=1
SV=1
Length = 1381
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 25 GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR--------- 75
GQ H + I R L +QVD + E F++ D+Q ++ + +Y+GR
Sbjct: 1142 GQPHSVNITRVYR--NLFIQVDYFPLTEQKFSLL--VDSQLDSPKALYLGRVMETGVIDP 1197
Query: 76 --NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGP 107
T GF GC+S V F+++ PLK F+ P
Sbjct: 1198 EIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRP 1231
>sp|O54991|CNTP1_MOUSE Contactin-associated protein 1 OS=Mus musculus GN=Cntnap1 PE=1 SV=2
Length = 1385
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 15/94 (15%)
Query: 25 GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR--------- 75
GQ H + I R L +QVD + E F++ D+Q ++ + +Y+GR
Sbjct: 1142 GQPHSVNITRVYR--NLFIQVDYFPLTEQKFSLL--VDSQLDSPKALYLGRVMETGVIDP 1197
Query: 76 --NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGP 107
T GF GC+S V F+++ PLK F+ P
Sbjct: 1198 EIQRYNTPGFSGCLSGVRFNNVAPLKTHFRTPRP 1231
>sp|Q99P47|CNTP4_MOUSE Contactin-associated protein-like 4 OS=Mus musculus GN=Cntnap4 PE=2
SV=2
Length = 1310
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 17/109 (15%)
Query: 17 FPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGRN 76
F K GQ H I+I R+ + +++D ++ + S+ +F+ ++ + +GR
Sbjct: 1095 FDLKSMADGQLHHIKINREE--GMVFVEIDENTRRQTYL----SSGTEFSAVKSLVLGRM 1148
Query: 77 ESMTE-----------GFIGCVSRVEFDDIYPLKLLFQEDGPANVRSIG 114
++ GF GC+S V+F I PLK Q PA V G
Sbjct: 1149 LEYSDVDQETALAAAHGFTGCLSAVQFSHIAPLKAALQPGPPAPVTVTG 1197
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 6 FDFGFERQEL-IFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQ 64
FD G EL + HF Q+H +R+ R A+L +VD PK Q
Sbjct: 856 FDVGNGPFELSVHSPTHFNDNQWHHVRVERNMKEASL--RVDELPPKIQAAPTDGHVLLQ 913
Query: 65 FNNIQYMYIGRNESMTEGFIGCVSRVEFD 93
N+ +++G + GF+GC+ ++ +
Sbjct: 914 LNS--QLFVGGTATRQRGFLGCIRSLQLN 940
>sp|Q0V8T0|CNTP5_CANFA Contactin-associated protein-like 5 OS=Canis familiaris GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 38.1 bits (87), Expect = 0.014, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 11 ERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQY 70
E Q ++F + H ++I R+ G L +QVD ++F S++ +F I+
Sbjct: 1083 ETQVFNIDAENFANRRMHHLKINRE--GRELAIQVDHQLRLSYNF----SSEVEFRAIRS 1136
Query: 71 MYIGR-----------NESMTEGFIGCVSRVEFDDIYPLK 99
+ +G+ ++ T GF+GC+S V+++ + PLK
Sbjct: 1137 LTLGKVREHLGLDSEIAKANTLGFVGCLSSVQYNQVAPLK 1176
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 17 FPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR- 75
F K+ GQ H I I R+ + +++D ++ H S+ +F+ ++ + +GR
Sbjct: 1093 FDFKNMADGQLHHIMINREE--GVVFIEIDDNRRRQVHL----SSGTEFSAVKSLVLGRI 1146
Query: 76 ----------NESMTEGFIGCVSRVEFDDIYPLKLLFQEDGPANVRSIG 114
+ +GF GC+S V+ + PLK P V G
Sbjct: 1147 LEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTG 1195
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 21 HFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGRNESMT 80
HF Q+H +R+ R A+L QVD PK Q N+ +++G +
Sbjct: 870 HFNDNQWHHVRVERNMKEASL--QVDQLTPKTQPAPADGHVLLQLNS--QLFVGGTATRQ 925
Query: 81 EGFIGCVSRVEFD 93
GF+GC+ ++ +
Sbjct: 926 RGFLGCIRSLQLN 938
>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus
GN=Cntnap5b PE=2 SV=1
Length = 1292
Score = 37.7 bits (86), Expect = 0.024, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 18/83 (21%)
Query: 28 HDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-----------N 76
H++ + R +G L +QVD + F +N S + +F ++ + +G+
Sbjct: 1088 HEVNMNR--NGQELSIQVDQ---QLFSYNF--SPEVEFQTVRSLILGKVTETLVLNPEVT 1140
Query: 77 ESMTEGFIGCVSRVEFDDIYPLK 99
++ T GF+GC+S V+++ I PLK
Sbjct: 1141 QANTLGFVGCLSSVQYNHIAPLK 1163
>sp|Q0V8T3|CTP5D_RAT Contactin-associated protein like 5-4 OS=Rattus norvegicus
GN=Cntnap5d PE=2 SV=1
Length = 1305
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 25 GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-NESM---- 79
G+ H ++I + G L +Q+D + F +N S +F ++ + +G+ E++
Sbjct: 1098 GRVHQVKINK--DGPELSIQMDQ---QLFTYNF--SPKVEFWTLKSLVLGKVTETLGLDP 1150
Query: 80 ------TEGFIGCVSRVEFDDIYPLKLLFQEDGPANVRSIG 114
GF+GC+S V+++ I PLK + G A V G
Sbjct: 1151 EVAKVNILGFVGCLSSVQYNHIAPLKAALRHSGIAPVTVQG 1191
>sp|Q0V8T9|CTP5A_MOUSE Contactin-associated protein like 5-1 OS=Mus musculus GN=Cntnap5a
PE=2 SV=1
Length = 1304
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 18/83 (21%)
Query: 28 HDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-NESM------- 79
H ++I R G L +Q+D + F+ S + +F ++ + +G+ E++
Sbjct: 1101 HQVKISR--DGPELSIQMD-----QQLFSYSFSPEVEFRTLRSLVLGKVTETLDLDPEVA 1153
Query: 80 ---TEGFIGCVSRVEFDDIYPLK 99
T GF+GC+S V+++ I PLK
Sbjct: 1154 RANTLGFVGCLSSVQYNHIAPLK 1176
>sp|Q0V8T6|CTP5A_RAT Contactin-associated protein like 5-1 OS=Rattus norvegicus
GN=Cntnap5a PE=2 SV=1
Length = 1305
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 18/97 (18%)
Query: 25 GQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-NESM---- 79
G+ H ++I + G + +Q+D + F +N S +F ++ + +G+ E++
Sbjct: 1098 GRVHQVKISK--DGPEISIQMDQ---QLFSYNF--STKVEFWTLKSLVLGKVTETLGLDP 1150
Query: 80 ------TEGFIGCVSRVEFDDIYPLKLLFQEDGPANV 110
GF+GC+S V+++ I PLK + G A V
Sbjct: 1151 EVAKVNILGFLGCLSSVQYNHIAPLKAALRHAGVAPV 1187
>sp|A5GMH7|THIE_SYNPW Thiamine-phosphate synthase OS=Synechococcus sp. (strain WH7803)
GN=thiE PE=3 SV=1
Length = 353
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 2 LRVVFD---FGFERQELIFPNKHF--GLGQYHDIRIRRKNSGAT 40
LRV+ D FG +RQ+L+ P K + LGQ H R R+ S AT
Sbjct: 29 LRVIEDWCRFGLDRQDLVVPLKDWRQQLGQLHHDRYRQARSTAT 72
>sp|Q0V8T8|CTP5B_MOUSE Contactin-associated protein like 5-2 OS=Mus musculus GN=Cntnap5b
PE=2 SV=1
Length = 1292
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 28 HDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-----------N 76
H +++ R G L +Q+D + F +N + +F ++ + +G+
Sbjct: 1088 HQVKMSR--DGPELSIQMDQ---QLFSYNF--PPEVEFQTVRSLILGKVTETLGLDPEVA 1140
Query: 77 ESMTEGFIGCVSRVEFDDIYPLK 99
++ T GF+GC+S V+++ I PLK
Sbjct: 1141 KANTLGFVGCLSSVQYNHIAPLK 1163
>sp|Q0V8T4|CTP5C_RAT Contactin-associated protein like 5-3 OS=Rattus norvegicus
GN=Cntnap5c PE=2 SV=1
Length = 1307
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 20/97 (20%)
Query: 28 HDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-NESM------- 79
H +++ R G L +Q+D + F +N +A+F ++ + +G+ E++
Sbjct: 1103 HHVKMNR--DGTELSIQMDQ---QLFSYNF--PLEAEFLTVRSLILGKVTETLGLDPRVA 1155
Query: 80 ---TEGFIGCVSRVEFDDIYPLKLLFQED--GPANVR 111
+ GFIGC+S V+++ I PLK + PA V+
Sbjct: 1156 RANSLGFIGCLSSVQYNHIAPLKAALRHASIAPATVQ 1192
>sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Homo sapiens GN=CNTNAP5 PE=2
SV=1
Length = 1306
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 21 HFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR----- 75
+F + H ++I R+ G L +Q+D ++F S + +F I+ + +G+
Sbjct: 1094 NFANRRMHHLKINRE--GRELTIQMDQQLRLSYNF----SPEVEFRVIRSLTLGKVTENL 1147
Query: 76 ------NESMTEGFIGCVSRVEFDDIYPLK 99
++ GF GC+S V+++ I PLK
Sbjct: 1148 GLDSEVAKANAMGFAGCMSSVQYNHIAPLK 1177
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 14 ELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYI 73
E IF ++ ++H +R+ R+ G +L + VD +P E D +F+N++ +
Sbjct: 785 ETIFSGQNLNDNEWHTVRVVRR--GKSLKLMVDDLQPSEGQIT-GDHTQLEFHNVETGIV 841
Query: 74 GRNESM---TEGFIGCVSRVEFD 93
M FIG + + F+
Sbjct: 842 TEKRYMPAVPSNFIGHLQGLSFN 864
>sp|Q0V8T7|CTP5C_MOUSE Contactin-associated protein like 5-3 OS=Mus musculus GN=Cntnap5c
PE=2 SV=1
Length = 1305
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 18/83 (21%)
Query: 28 HDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR-NESM------- 79
H +++ R G L +Q+D + F+ S +++F + + +G+ E++
Sbjct: 1101 HQVKMSR--DGPELSIQMD-----QQLFSYTFSLESEFQRARSLVLGKVTETLGLDPEVA 1153
Query: 80 ---TEGFIGCVSRVEFDDIYPLK 99
T GF+GC+S V+++ I PLK
Sbjct: 1154 RANTLGFVGCLSSVQYNHITPLK 1176
>sp|Q0V8S9|CNTP5_CHICK Contactin-associated protein-like 5 OS=Gallus gallus GN=CNTNAP5 PE=2
SV=1
Length = 1305
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 18/90 (20%)
Query: 21 HFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQFNNIQYMYIGR----- 75
+F + H ++I R+ G L++QVD + +F ++ F I+ + +G+
Sbjct: 1094 NFANREMHHVKINRE--GRELIIQVDQVIKLKHNF-----SEIDFKAIKSLTLGKVTDSL 1146
Query: 76 ------NESMTEGFIGCVSRVEFDDIYPLK 99
+++ GF GC+S V ++ + PLK
Sbjct: 1147 PLDPEVSKANAYGFTGCMSSVWYNHVAPLK 1176
>sp|Q63376|NRX2B_RAT Neurexin-2-beta OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=1
Length = 662
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 4 VVFDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKE 52
V+F+ G + + PN G+YH +R R ATL QVDS+ E
Sbjct: 152 VIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATL--QVDSWPVNE 198
>sp|P58401|NRX2B_HUMAN Neurexin-2-beta OS=Homo sapiens GN=NRXN2 PE=2 SV=1
Length = 666
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 4 VVFDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKE 52
V+F+ G + + PN G+YH +R R ATL QVDS+ E
Sbjct: 156 VIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATL--QVDSWPVNE 202
>sp|Q63374|NRX2A_RAT Neurexin-2 OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=3
Length = 1715
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 4 VVFDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKE 52
V+F+ G + + PN G+YH +R R ATL QVDS+ E
Sbjct: 1205 VIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATL--QVDSWPVNE 1251
>sp|Q9P2S2|NRX2A_HUMAN Neurexin-2 OS=Homo sapiens GN=NRXN2 PE=2 SV=1
Length = 1712
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 4 VVFDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKE 52
V+F+ G + + PN G+YH +R R ATL QVDS+ E
Sbjct: 1202 VIFNVGTDDITIDEPNAIVSDGKYHVVRFTRSGGNATL--QVDSWPVNE 1248
>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis elegans GN=epi-1 PE=1
SV=1
Length = 3672
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 HLRVVFDFGF-ERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYE 49
H RVVF + Q +I +K G++H I++ R+ A L++ +SYE
Sbjct: 3366 HGRVVFTYDTGSGQVIIKSDKSIIDGRWHTIKVSRRGKSAHLIVDDNSYE 3415
>sp|Q9ERD9|I23O1_RAT Indoleamine 2,3-dioxygenase 1 OS=Rattus norvegicus GN=Ido1 PE=2
SV=1
Length = 407
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Query: 6 FDFGFERQELIFPNKHFGLGQYHDIRIRRKNSGATLLMQVDSYEPKEFHFNIKDSADAQF 65
F G Q IF + LG HD+ + S A L ++ Y P H N S ++
Sbjct: 263 FSGGSAGQSSIFQSLDVLLGIKHDVG---EGSAAEFLQEMREYMPPA-HRNFLSSLESAP 318
Query: 66 NNIQYMYIGRNESMTEGFIGCVS 88
+++ + RNE + E + CV+
Sbjct: 319 PVREFVILRRNEDLKEAYNECVN 341
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.144 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,904,589
Number of Sequences: 539616
Number of extensions: 1528001
Number of successful extensions: 3084
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3038
Number of HSP's gapped (non-prelim): 54
length of query: 114
length of database: 191,569,459
effective HSP length: 82
effective length of query: 32
effective length of database: 147,320,947
effective search space: 4714270304
effective search space used: 4714270304
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)