Query psy13339
Match_columns 365
No_of_seqs 313 out of 679
Neff 6.1
Searched_HMMs 29240
Date Fri Aug 16 16:54:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13339.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13339hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dxt_A SUN domain-containing p 100.0 9E-57 3.1E-61 411.8 17.6 193 47-242 4-197 (198)
2 4dxt_A SUN domain-containing p 99.9 2.9E-26 9.9E-31 209.7 7.3 104 262-365 34-145 (198)
3 2yc2_A IFT25, intraflagellar t 99.5 8.9E-14 3.1E-18 119.9 14.6 134 72-240 4-138 (139)
4 1tvg_A LOC51668 protein; cell 98.8 2.1E-07 7.1E-12 81.5 16.3 139 71-244 11-150 (153)
5 3f2z_A Uncharacterized protein 97.9 0.00048 1.6E-08 59.2 15.9 118 113-243 28-151 (159)
6 3ggl_A Putative chitobiase; X- 97.8 0.0012 4.1E-08 57.4 16.3 118 114-244 39-162 (169)
7 2jda_A Yecbm32; hypothetical p 97.6 0.0024 8.1E-08 53.2 15.1 116 113-244 24-140 (145)
8 2j1a_A Hyaluronidase, CBM32; p 97.2 0.005 1.7E-07 51.1 12.8 114 113-239 26-150 (150)
9 1jhj_A APC10; beta sandwich, j 97.1 0.0019 6.4E-08 57.4 9.0 112 122-241 46-161 (171)
10 4a41_A GH89_CBM32-5, alpha-N-a 96.9 0.013 4.6E-07 50.4 12.8 111 113-238 45-160 (161)
11 1o59_A Allantoicase; YIR029W, 96.8 0.31 1.1E-05 47.6 22.3 237 66-355 27-296 (355)
12 2yc2_A IFT25, intraflagellar t 96.7 0.0014 4.8E-08 55.8 4.6 56 298-353 35-92 (139)
13 2v72_A CBM32, EXO-alpha-sialid 96.6 0.029 9.8E-07 46.1 11.8 111 113-238 27-142 (143)
14 3hnm_A Putative chitobiase; PS 96.4 0.028 9.6E-07 49.5 11.1 105 114-226 40-149 (172)
15 1w8o_A Bacterial sialidase; 3D 96.1 0.11 3.7E-06 53.2 15.7 115 114-241 479-601 (601)
16 1gqp_A DOC1/APC10; cell cycle, 95.3 0.06 2E-06 49.5 8.8 112 122-241 77-194 (221)
17 4a3z_A GH89_CBM32, alpha-N-ace 95.1 0.25 8.7E-06 42.7 11.9 111 113-238 44-160 (161)
18 1k3i_A Galactose oxidase precu 95.0 0.25 8.6E-06 51.1 13.5 117 113-241 42-166 (656)
19 2v5d_A O-GLCNACASE NAGJ; famil 94.0 0.36 1.2E-05 51.6 12.2 114 113-239 613-737 (737)
20 1xoy_A Hypothetical protein AT 93.7 0.28 9.5E-06 42.9 8.7 94 129-241 51-161 (161)
21 1wwy_A Thioredoxin-like protei 93.1 0.33 1.1E-05 42.8 8.4 100 137-244 52-158 (171)
22 4a42_A GH89_CBM32-4, alpha-N-a 92.3 2 6.8E-05 36.2 12.0 105 114-239 42-148 (149)
23 1k12_A Lectin; beta barrel, pr 91.7 2.8 9.5E-05 35.6 12.4 118 114-243 32-156 (158)
24 1o59_A Allantoicase; YIR029W, 91.2 3.8 0.00013 40.0 13.9 134 72-240 206-355 (355)
25 3cqo_A FBP32; F-lectin, fucole 91.0 8.2 0.00028 35.8 15.9 199 115-353 25-232 (293)
26 4a4a_A Alpha-N-acetylglucosami 90.8 2.8 9.5E-05 45.9 14.0 114 113-243 42-156 (914)
27 3eyp_A Putative alpha-L-fucosi 90.8 1.2 4.2E-05 45.0 10.6 115 114-246 344-462 (469)
28 2qqi_A Neuropilin-1; VEGF rece 90.3 6.9 0.00024 36.9 14.9 179 125-332 43-236 (318)
29 3lei_A Platelet aggregation fa 87.9 7.4 0.00025 32.6 11.9 119 113-244 27-150 (153)
30 2j1v_A Fucolectin-related prot 83.8 18 0.00062 30.3 13.0 113 113-240 33-150 (151)
31 3cqo_A FBP32; F-lectin, fucole 83.7 4.3 0.00015 37.8 9.1 116 114-243 170-293 (293)
32 3ues_A Alpha-1,3/4-fucosidase; 83.0 10 0.00035 38.4 12.1 104 115-238 370-476 (478)
33 2wuh_A Discoidin domain recept 82.2 21 0.00071 30.9 12.3 110 125-244 56-177 (178)
34 2qqj_A Neuropilin-2; VEGF rece 79.2 26 0.00088 32.9 12.9 178 126-332 45-237 (325)
35 3bn6_A Lactadherin; anticoagul 78.5 7 0.00024 32.9 7.9 104 124-239 44-157 (158)
36 2j22_A Fucolectin-related prot 72.9 40 0.0014 28.1 13.5 113 113-240 30-147 (148)
37 2vm9_A Discoidin-2, discoidin 68.1 33 0.0011 31.4 10.2 108 125-246 48-160 (257)
38 1czt_A Protein (coagulation fa 67.8 24 0.00083 29.7 8.7 106 124-241 43-158 (160)
39 4gwi_A Lectinolysin, platelet 65.6 59 0.002 27.2 12.3 116 113-242 27-148 (153)
40 2qqm_A Neuropilin-1; VEGF rece 65.0 48 0.0016 32.5 11.4 178 124-332 174-368 (450)
41 1sdd_B Coagulation factor V; c 64.8 1.3E+02 0.0045 30.9 15.3 176 126-331 368-564 (647)
42 1tvg_A LOC51668 protein; cell 55.4 22 0.00074 30.2 6.0 47 298-356 43-90 (153)
43 2zxq_A Endo-alpha-N-acetylgala 53.4 2.8 9.5E-05 47.4 0.0 118 114-240 1245-1374(1376)
44 2jda_A Yecbm32; hypothetical p 53.0 47 0.0016 26.4 7.6 50 299-357 33-82 (145)
45 4gz9_A Neuropilin-1, A5 protei 50.0 1.3E+02 0.0044 30.6 11.9 107 125-243 293-409 (577)
46 2w1s_A Hyaluronoglucosaminidas 45.4 1.5E+02 0.0051 25.6 14.5 101 127-237 51-160 (192)
47 2qqo_A Neuropilin-2; VEGF rece 44.5 1.4E+02 0.0048 29.2 10.9 179 125-332 173-366 (460)
48 3hny_M Coagulation factor VIII 35.3 1.6E+02 0.0055 24.5 8.4 104 125-240 46-157 (159)
49 2qqk_A Neuropilin-2; VEGF rece 33.8 2.5E+02 0.0085 28.2 11.0 178 126-332 293-485 (579)
50 4deq_A Neuropilin-1, vascular 32.5 2.6E+02 0.009 24.8 9.8 110 126-245 43-160 (218)
51 2r7e_B Coagulation factor VIII 30.7 65 0.0022 34.4 6.1 175 126-330 497-685 (770)
52 3gza_A Putative alpha-L-fucosi 27.3 3.3E+02 0.011 27.0 10.3 88 133-238 353-440 (443)
53 3hnm_A Putative chitobiase; PS 26.6 1.9E+02 0.0066 24.6 7.5 57 299-357 48-109 (172)
54 2ad6_B Methanol dehydrogenase 26.1 16 0.00055 26.9 0.3 9 298-306 7-15 (69)
55 3f2z_A Uncharacterized protein 25.8 2.3E+02 0.0078 23.0 7.7 53 298-356 36-94 (159)
56 1w6s_B Methanol dehydrogenase 24.6 18 0.00061 27.0 0.3 9 298-306 7-15 (74)
57 4a41_A GH89_CBM32-5, alpha-N-a 23.9 1.8E+02 0.0062 23.9 6.7 54 298-357 53-111 (161)
58 1lrw_B Methanol dehydrogenase 22.1 21 0.00073 27.1 0.3 9 298-306 7-15 (83)
No 1
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=100.00 E-value=9e-57 Score=411.80 Aligned_cols=193 Identities=45% Similarity=0.811 Sum_probs=181.0
Q ss_pred eecHHHHHHhhchhhHHHHHHhccccccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCC
Q psy13339 47 VRNEEVLRRIGEERSILRTIKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPG 126 (365)
Q Consensus 47 i~N~evl~~l~~~~~il~~i~~drl~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG 126 (365)
++.++|.+-+ +++++++.+|+++++|||+...||+|+.++||+||..++++.++||+++|..+++|++||+|+..||
T Consensus 4 ~~~~~v~~~v---~~~l~~~~~D~~g~~DyAl~s~Ga~Ii~~~tS~ty~~~~~~~s~~g~~~~~~~~~P~~~L~p~~~pG 80 (198)
T 4dxt_A 4 VTEEQVHHIV---KQALQRYSEDRIGLADYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPG 80 (198)
T ss_dssp CCHHHHHHHH---HHHHHHHHTTTTCCCCTTCGGGTCEEEEEEECCBCCTTHHHHTTTCCCSSCCCCCGGGGGSSCCSTT
T ss_pred CCHHHHHHHH---HHHHHHHhccccCCcCeEcccCCcEEcCcccCCCccCCCceeeecCccccccCCCchheEcCCCCCc
Confidence 4556774433 5789999999999999999999999999999999999888888999999999999999999999999
Q ss_pred CeeeccCCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEe
Q psy13339 127 DCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEA 206 (365)
Q Consensus 127 ~CW~f~Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v 206 (365)
+||||+|++|+|+|+|+++|+|++|||||+++.++|+++++||||+|+|||+.++.++++++||+|+||.+|.++|+|.|
T Consensus 81 ~CW~f~g~~g~l~I~Ls~~I~~~~VtieHi~~~~sp~~~~~SAPKdf~V~g~~~~~~~~~~~Lg~f~Y~~~~~~~QtF~l 160 (198)
T 4dxt_A 81 NCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHF 160 (198)
T ss_dssp CSEEEETTCEEEEEEEEEEEEEEEEEEECCCGGGSGGGCCTTSBCEEEEEEESSSSCCCCEEEEEEECCTTSCSEEEEEC
T ss_pred ceeecCCCcceeeeecCCeEEEEEEEEEcCchhcccccCcCCCCcEEEEEEEcCCCCCCcEEEEEEEECCCCCcceEEEe
Confidence 99999999999999999999999999999999999988999999999999999998888999999999999999999999
Q ss_pred cCC-CcceeEEEEEEeecCCCCCCceEEEEEEeeeeC
Q psy13339 207 KMV-ADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 242 (365)
Q Consensus 207 ~~~-~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~ 242 (365)
+.. ...+++|+|||+|||||++|||||||||||+++
T Consensus 161 ~~~~~~~~~~V~l~i~SN~G~~~~TClYr~RVhG~~~ 197 (198)
T 4dxt_A 161 QAPTMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA 197 (198)
T ss_dssp SSCCSCCEEEEEEEECCBSSCSSEEEECEEEEEEECC
T ss_pred CCCCCcceeEEEEEEECCCCCCCcEEEEEEEEcCEeC
Confidence 976 568999999999999999999999999999985
No 2
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=99.92 E-value=2.9e-26 Score=209.72 Aligned_cols=104 Identities=35% Similarity=0.409 Sum_probs=92.1
Q ss_pred ccceeeeccCCCCcccccc--ccccce-eeeeccCCcCC----CCCCCeeeeeCCeeEEEEEecceeEeeEEEEeecCCC
Q psy13339 262 LHHMTSSKYNPSGTEEEKS--NRSVAL-TWVMFQSHRAG----KMRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKT 334 (365)
Q Consensus 262 ~~~~~~~~~~~s~~~~~~~--~~~~~~-~~~~~~~p~~~----~~pg~cw~f~g~~g~~~i~l~~~i~~~~~tleHi~~~ 334 (365)
+.||+|+...+|.||..+. +.++|+ +|+.+++|+++ ..||+||||+|++|+|+|+|+++|+|++|||||++++
T Consensus 34 s~Ga~Ii~~~tS~ty~~~~~~~s~~g~~~~~~~~~P~~~L~p~~~pG~CW~f~g~~g~l~I~Ls~~I~~~~VtieHi~~~ 113 (198)
T 4dxt_A 34 SGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFAVVRLSARIRPTAVTLEHVPKA 113 (198)
T ss_dssp GGTCEEEEEEECCBCCTTHHHHTTTCCCSSCCCCCGGGGGSSCCSTTCSEEEETTCEEEEEEEEEEEEEEEEEEECCCGG
T ss_pred cCCcEEcCcccCCCccCCCceeeecCccccccCCCchheEcCCCCCcceeecCCCcceeeeecCCeEEEEEEEEEcCchh
Confidence 6899999999999998753 345665 78888888765 6899999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceeEEEEeecCCC-ceecccC
Q psy13339 335 LTPNGIIDSAPKKFAVWVSEHSQC-NVTFLLQ 365 (365)
Q Consensus 335 ~~~~~~~~sapk~f~v~g~~~~~~-~~~~l~~ 365 (365)
|+|+++++||||||+|||+.++.+ +.++||+
T Consensus 114 ~sp~~~~~SAPKdf~V~g~~~~~~~~~~~Lg~ 145 (198)
T 4dxt_A 114 LSPNSTISSAPKDFAIFGFDEDLQQEGTLLGK 145 (198)
T ss_dssp GSGGGCCTTSBCEEEEEEESSSSCCCCEEEEE
T ss_pred cccccCcCCCCcEEEEEEEcCCCCCCcEEEEE
Confidence 999999999999999999998754 5578875
No 3
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=99.54 E-value=8.9e-14 Score=119.85 Aligned_cols=134 Identities=19% Similarity=0.258 Sum_probs=105.4
Q ss_pred cccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCCCeeeccCCc-eEEEEEcCceeEEEE
Q psy13339 72 SWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGAI-GCLVLKLSHRIQVTR 150 (365)
Q Consensus 72 ~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG~CW~f~Gs~-G~L~I~Ls~~I~~~~ 150 (365)
++.|+|+...|++|+..-++ .. ..+|..||+++ ++.||++.|.. ..|+|+|.+++.++.
T Consensus 4 ~~~~~a~~~~g~~v~~~ss~---~~---------------~~~~~~~iDg~--~~T~W~s~g~~pq~i~I~~~~~~~is~ 63 (139)
T 2yc2_A 4 SMKDYAREENGGLVVMASCS---DE---------------RFPPENMLDGK--DNTFWVTTGMFPQEFVLRLESCIRVSK 63 (139)
T ss_dssp -CEETTSSTTSCEECCCSCC---BT---------------TSCGGGGGSSC--TTCCEECCSSSCEEEEEEEEEEEEEEE
T ss_pred ccceehhccCCcEEEEeccC---CC---------------CCChhheECCC--CCCEEeCCCCCCeEEEEECCCceEEEE
Confidence 47899999999999865222 11 24788888876 88999999875 689999999999999
Q ss_pred EEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCc
Q psy13339 151 FSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYT 230 (365)
Q Consensus 151 vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yT 230 (365)
|+|.+- -+|+++|.+..+.....+..+++.++....+..|++.++.. ...++|+|+|++||++ |+
T Consensus 64 ~~i~~~------------~~k~~~ie~s~~~~p~~w~~i~~~~f~~~~~~~q~~~f~~~-~~a~~lrl~i~s~~d~--f~ 128 (139)
T 2yc2_A 64 ITTLSL------------NVRKLAVEKCDQDKPDQFEKVFEVELANRGDRLQTEVHQVN-IRAKYLKFILLQGHGE--FA 128 (139)
T ss_dssp EEEEEE------------SEEEEEEEEECSSSCCCCEEEEEEECCCC--CCEEEEEEEE-EEEEEEEEEEEEESSS--CC
T ss_pred EEEEec------------CCcEEEEEEecCCCCCceEEEEEEEeecCCCCceEEEccCC-CcEEEEEEEEEeccCc--eE
Confidence 999974 28999999887664446788887776654457898766532 2379999999999996 89
Q ss_pred eEEEEEEeee
Q psy13339 231 CLYRFRVHGN 240 (365)
Q Consensus 231 ClYR~RVhG~ 240 (365)
|||||+|||.
T Consensus 129 ~iy~~~v~G~ 138 (139)
T 2yc2_A 129 TVNRVSVVGG 138 (139)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEEEEec
Confidence 9999999996
No 4
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=98.79 E-value=2.1e-07 Score=81.48 Aligned_cols=139 Identities=12% Similarity=0.145 Sum_probs=105.4
Q ss_pred ccccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCCCeeeccCC-ceEEEEEcCceeEEE
Q psy13339 71 RSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPGDCWAFQGA-IGCLVLKLSHRIQVT 149 (365)
Q Consensus 71 l~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG~CW~f~Gs-~G~L~I~Ls~~I~~~ 149 (365)
.+.+|-++-..|++|+..- | .. ...+|..||+.+ +..||+..|. ...|+|+|.+++.++
T Consensus 11 ~~~~~~~~~~~g~~v~~as-s--~~---------------~~~~~~~~iDgn--~~T~W~t~g~~Pq~i~Idf~k~~~is 70 (153)
T 1tvg_A 11 MRKIDLCLSSEGSEVILAT-S--SD---------------EKHPPENIIDGN--PETFWTTTGMFPQEFIICFHKHVRIE 70 (153)
T ss_dssp ---CBTTCGGGTCEEECCS-C--CC---------------TTSCGGGGGSSC--TTCCEECCSCSSEEEEEEEEEEEEEE
T ss_pred hhccccccccCCcEEEEec-c--cC---------------cccCHHHcCcCC--CCceEECCCCCCcEEEEECCCceEEE
Confidence 4567778888888888532 1 11 123677788754 6799998876 458999999999999
Q ss_pred EEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCC
Q psy13339 150 RFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEY 229 (365)
Q Consensus 150 ~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~y 229 (365)
.|+|.=- -+|+++|.+..+.....+..+++.+|....+..|++.++. .....+|+|.|+++++. +
T Consensus 71 ~~~i~~~------------~vk~~~ie~s~d~~p~~w~~i~e~ef~~~~n~~Q~~~~~~-~~~a~~lRl~i~s~~d~--f 135 (153)
T 1tvg_A 71 RLVIQSY------------FVQTLKIEKSTSKEPVDFEQWIEKDLVHTEGQLQNEEIVA-HGSATYLRFIIVSAFDH--F 135 (153)
T ss_dssp EEEEEEE------------SEEEEEEEEECSSSSCCCEEEEEEECCCCTTCCEEEEECC-CEEEEEEEEEEEEESSS--C
T ss_pred EEEEEec------------CCEEEEEEEECCCCCcceEEeEEEEecCCCCcEEEEEcCC-CceeEEEEEEEEccccc--E
Confidence 9999821 2899999988765433588899888877656699999885 34579999999999995 8
Q ss_pred ceEEEEEEeeeeCCC
Q psy13339 230 TCLYRFRVHGNLAPS 244 (365)
Q Consensus 230 TClYR~RVhG~~~~~ 244 (365)
..+|+|.|.|..+.+
T Consensus 136 v~Iy~l~v~G~~~~~ 150 (153)
T 1tvg_A 136 ASVHSVSAEGTVVSN 150 (153)
T ss_dssp CEEEEEEEEEEEEC-
T ss_pred EEEEEEEEEEEEccc
Confidence 999999999987654
No 5
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=97.90 E-value=0.00048 Score=59.15 Aligned_cols=118 Identities=14% Similarity=0.223 Sum_probs=88.0
Q ss_pred cCccccccccCCCCCeeeccCC------ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCc
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQGA------IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENP 186 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~Gs------~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~ 186 (365)
.+|..|++.+ ++.+|....+ .-.|+|.|.++..++.|.+..-... ....|++|+|+...|. ..+
T Consensus 28 g~~~~a~DG~--~~T~W~s~~~~~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~------~~~~~~~~~I~~S~Dg--~~W 97 (159)
T 3f2z_A 28 GHAKHLIDGN--IETFWHSRWQGGSDPLPYEIIIDMNHRVKIAQIELLPRGRG------SNNPIKVVRFEASEDG--TNW 97 (159)
T ss_dssp BSGGGGSSSC--TTCCEECCCTTCCCCSCEEEEEEEEEEEEEEEEEEEECCTT------CCCCCCEEEEEEESSS--SSC
T ss_pred CcHHhcCCCC--CCCeEEcCCcCCCCCCCEEEEEECCCceEEEEEEEEecCCC------CCCCeeEEEEEEEcCC--CCe
Confidence 3566777665 4688987642 3389999999999999999653211 1357999999987654 357
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 243 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~ 243 (365)
..+++++++.. ...|+|..+ ....++|+|.+++++|+..+.+|..|+|+|....
T Consensus 98 ~~v~~~~~~~~-~~~~~~~~~--~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~ 151 (159)
T 3f2z_A 98 ESIGQFGFTNQ-DAALKYYVK--SSTARYIKLVIPDGVGNGTVAAIRELDVRGTVVN 151 (159)
T ss_dssp EEEEEEECCCC-SSCEEECCC--CEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC
T ss_pred EEeEEeecCCC-CccEEEecC--CceEEEEEEEEEeccCCCceEEEEEEEEEcCCCC
Confidence 88998887554 346666443 3457999999999999767999999999998744
No 6
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.76 E-value=0.0012 Score=57.42 Aligned_cols=118 Identities=14% Similarity=0.168 Sum_probs=86.9
Q ss_pred CccccccccCCCCCeeeccC------CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 114 SPRKAIQPGLLPGDCWAFQG------AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f~G------s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
+|..|++.+. +..|.... ..-.|.|.|.++..++.|.+..-.. .-...|++|+|+...|. ..+.
T Consensus 39 ~~~~a~DG~~--~T~W~s~~~~~~~~~p~wi~vDLg~~~~i~~v~~~~r~~------~~~~~~~~y~I~~S~Dg--~~W~ 108 (169)
T 3ggl_A 39 LAKCLIDGDT--ETFWHAKWQGGSDPLPYDIVIDMKQNIQIAQVELLPRGR------GSNNPIKVVEFAASEDN--VNWT 108 (169)
T ss_dssp SGGGGGSSCS--SCCEECCCSSCCCCSCEEEEEEEEEEEEEEEEEEEECCT------TCCCCCCEEEEEEESSS--SCCE
T ss_pred cHHhcCCCCC--CCceEccCcCCCCCCCEEEEEECCCcEEEeEEEEEecCC------CCCCCeeEEEEEEeCCC--CCcE
Confidence 5667776654 56787653 2348999999999999999965321 11357999999986654 3478
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCC
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPS 244 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~ 244 (365)
.+++.++... ...|.+..+ ....++|+|.+++++|+..+.+|..|+|+|....-
T Consensus 109 ~v~~~~~~~~-~~~~~~~f~--~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~~ 162 (169)
T 3ggl_A 109 PIGRFGFTNQ-DAALEYYVK--SIKARYIRLTIPDDGGNSTVAAIRELDVKGTIINL 162 (169)
T ss_dssp EEEEEECCCC-SSCEEECCC--CEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC-
T ss_pred EeEEEEeccC-CCcEEEEec--CceEEEEEEEEEeCCCCCceEEEEEEEEEcCCCCc
Confidence 8998887554 345666443 24579999999999997679999999999987543
No 7
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=97.59 E-value=0.0024 Score=53.18 Aligned_cols=116 Identities=14% Similarity=0.172 Sum_probs=85.3
Q ss_pred cCccccccccCCCCCeeeccCCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEE
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEF 192 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f 192 (365)
..|..+++.+ ++.+|+..+. ..|.|.|.++..++.|.+..-.. ...|++|.|....|. ..+..+.+.
T Consensus 24 ~~~~~a~Dg~--~~t~W~~~~~-~~l~vDLg~~~~v~~v~i~~~~~--------~~~~~~~~i~~S~Dg--~~w~~~~~~ 90 (145)
T 2jda_A 24 HVPANIADGD--VKTRWAASGE-SWVQLELDKEQSIENILIVPFKP--------TERKLKFSIFYSNDG--KNWQPLAEG 90 (145)
T ss_dssp BCGGGGGSSC--TTCCEEEESS-EEEEEEEEEEEEEEEEEEEESST--------TTCCEEEEEEEESSS--SSCEEEEEE
T ss_pred CCchhcccCC--CCCeECCCCC-eeEEEECCCceEEEEEEEEeccC--------CCceEEEEEEEeCCC--CceEEeeeC
Confidence 4566676654 4679999887 89999999999999999987521 237999999986553 246777766
Q ss_pred EEcC-CCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCC
Q psy13339 193 MYDS-EGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPS 244 (365)
Q Consensus 193 ~Yd~-~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~ 244 (365)
.... +....+.+.++. ...++|+|.+.++.++ .+..|+.|+|+|....+
T Consensus 91 ~~~~~~~~~~~~~~f~~--~~aryvRi~~~~~~~~-~~~~i~Ei~v~g~~~~~ 140 (145)
T 2jda_A 91 LETSSADKNGEKLTFTP--VTAKYIKLDTFGTDVN-NWSAINEIAINSAAALP 140 (145)
T ss_dssp EECCCSCSSCEEEEEEE--EEEEEEEEEEEEESSS-SEEEEEEEEESCCCSSC
T ss_pred ccccCCCCccEEEEeCc--ccEEEEEEEEECCCCC-cEeEEEEEEEECCCCCC
Confidence 5422 223456666632 4579999999999875 46799999999986543
No 8
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=97.25 E-value=0.005 Score=51.07 Aligned_cols=114 Identities=14% Similarity=0.172 Sum_probs=79.6
Q ss_pred cCccccccccCCCCCeeecc------CCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCc
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQ------GAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENP 186 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~------Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~ 186 (365)
.+|..+++.+. +.+|... .....|.|.|.++..++.|.+..-.. .....|++|+|.+..|. ..+
T Consensus 26 ~~~~~~~DG~~--~t~w~s~~~~~~~~~~~~l~iDLg~~~~i~~v~~~~~~~------~~~~~~~~~~i~~S~Dg--~~w 95 (150)
T 2j1a_A 26 APASFASDGDM--NTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQD------SKNGRITGYKVSVSLDG--ENF 95 (150)
T ss_dssp BCGGGGSSSCT--TCCEECCCSSSCCCSCCEEEEEEEEEEEEEEEEEECCSS------CCTTEEEEEEEEEESSS--SSE
T ss_pred CcHHhcCcCCC--CCcEEccccCCCCCCCeEEEEECCCCeEEeEEEEeecCC------CCCCCEEEEEEEEEcCC--Cce
Confidence 35666666543 4555433 23468999999999999999975321 12347899999987654 347
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecC-----CCCCCceEEEEEEee
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNH-----GNIEYTCLYRFRVHG 239 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~-----G~~~yTClYR~RVhG 239 (365)
..+++.+++.+ ...|.+.++. ...++|+|.+++++ |...+..|+.|+|+|
T Consensus 96 ~~v~~~~~~~~-~~~~~~~~~~--~~aryvRi~~~~~~~~~~~~~~~~~~i~Ei~v~G 150 (150)
T 2j1a_A 96 TEVKTGTLEDN-AAIKFIEFDS--VDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG 150 (150)
T ss_dssp EEEEEEECCSS-SSCEEEEEEE--EEEEEEEEEEEEEECCC--CTTTCCEESEEEEEC
T ss_pred EEEEEeeECCC-CceEEEEECC--eEEEEEEEEEEecccccccCCCceEEEEEEEEeC
Confidence 78887776654 3456665553 45799999999865 333689999999998
No 9
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=97.09 E-value=0.0019 Score=57.37 Aligned_cols=112 Identities=12% Similarity=0.068 Sum_probs=85.7
Q ss_pred cCCCCCeeeccCCce-EEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCc
Q psy13339 122 GLLPGDCWAFQGAIG-CLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPT 200 (365)
Q Consensus 122 ~~~pG~CW~f~Gs~G-~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~ 200 (365)
+.++..||-..|... .|+|++.+.+.|..|.+.--.+. |-+-.|+.++|.+=.+..+ ...++..+.+.. .+
T Consensus 46 D~~~~TyWqSdg~qpH~I~i~f~k~v~i~~l~i~vd~~~-----DeSYtPs~I~v~aG~~~~d--L~ei~~v~l~~p-~G 117 (171)
T 1jhj_A 46 DDNLETYWQSDGSQPHLVNIQFRRKTTVKTLCIYADYKS-----DESYTPSKISVRVGNNFHN--LQEIRQLELVEP-SG 117 (171)
T ss_dssp SSCTTCCEECCSSSSEEEEEEEEEEEEECEEEEEEEHHH-----HGGGSEEEEEEEEESSTTS--CEEEEEEECSSC-EE
T ss_pred CCCCCeeEccCCCCCeEEEEEECCCceEEEEEEEECCCC-----CCCCCcEEEEEEEeCCccc--ceeEEEEEccCC-CE
Confidence 456778999998766 69999999999999999865421 3344899999987766544 367777777754 45
Q ss_pred eeEEEecCC---CcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 201 LQYFEAKMV---ADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 201 ~Q~F~v~~~---~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
-+.+.+... ......|++.|++||.|..-|++-.|||+|..
T Consensus 118 wv~i~l~~~~~~~~~~~~IQI~I~~nhqnG~DthIR~ikI~G~~ 161 (171)
T 1jhj_A 118 WIHVPLTDNHKKPTRTFMIQIAVLANHQNGRDTHMRQIKIYTPV 161 (171)
T ss_dssp EEEEECBCTTSSBEEEEEEEEEEEEEGGGCSSCEECEEEEEEEC
T ss_pred EEEEEeccCCCCceeEEEEEEEEeccCCCCCccEEEEEEEEecC
Confidence 566666432 23456999999999988888999999999984
No 10
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=96.93 E-value=0.013 Score=50.43 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=80.0
Q ss_pred cCccccccccCCCCCeeeccC-----CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQG-----AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~G-----s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
.++..|++.+ ++.+|.... ..-.|+|.|.++..++.|.+..-.. .....|++|+|....|. ..+.
T Consensus 45 ~~~~~a~DG~--~~T~W~s~~~~~~~~p~~i~iDLg~~~~I~~v~~~~r~~------~~~~~~~~y~I~~S~DG--~~W~ 114 (161)
T 4a41_A 45 GLAKFAIDGK--ENTIWHTKYNPVEELPQSITLELGGSYEINKFTYLPRSG------AKNGNITKYELHVSEDG--NNFR 114 (161)
T ss_dssp CCGGGGGSSC--TTCCEECCTTTTCCSCEEEEEEEEEEEEEEEEEEECCSS------CCTTCEEEEEEEEESSS--SCEE
T ss_pred CcHHHcCcCC--CCCeEEeCCCCCCCCCEEEEEEcCCCEEEeEEEEEecCC------CCCCcEEEEEEEEECCC--CceE
Confidence 3566666654 467898763 2348999999999999999864211 12347999999986554 2477
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEe
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVH 238 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVh 238 (365)
.+++..++.+ ...|++.++. ...++|+|.++++.|+ +..+..|+|+
T Consensus 115 ~v~~g~~~~~-~~~~~~~f~~--v~aRYVRi~~~~~~~~--~~si~E~~Vy 160 (161)
T 4a41_A 115 KISEGNWDDS-GSLKTLKFNS--TKATHVKLVALEGVGG--FASAAELNVF 160 (161)
T ss_dssp EEEEEECCSS-SSCEEEEEEE--EEEEEEEEEEEEEGGG--CCEESEEEEE
T ss_pred EeeeeeecCC-CcEEEEEeCC--ceEEEEEEEEEEccCC--eEEeEeEEEE
Confidence 7887766544 3456666653 3579999999999885 8999999997
No 11
>1o59_A Allantoicase; YIR029W, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics, hydrolase; 2.40A {Saccharomyces cerevisiae} SCOP: b.18.1.22 b.18.1.22 PDB: 1sg3_A
Probab=96.79 E-value=0.31 Score=47.61 Aligned_cols=237 Identities=13% Similarity=0.161 Sum_probs=133.9
Q ss_pred HHhccccccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccCCCC---CeeeccCCc----eEE
Q psy13339 66 IKKRKRSWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGLLPG---DCWAFQGAI----GCL 138 (365)
Q Consensus 66 i~~drl~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~~pG---~CW~f~Gs~----G~L 138 (365)
+.-.+.+..|-|+...|++|+.. +.+-|.....++ .+.+|...=..-.+-| +=|-....+ =..
T Consensus 27 ~~~~~~~~~dLas~~lGg~vl~~-sDe~Fa~a~NLL---------~p~~p~~~~~~f~~~GkwmDGWETRR~R~~ghDW~ 96 (355)
T 1o59_A 27 IIISKNKAVDVIGSKLGGQVVSF-SDEWFASAENLI---------QPTAPIRDPTRFVHSGAWYDGWETRRHNEMEYDWV 96 (355)
T ss_dssp HHTTTTCCEETTCGGGTCEEEEE-SCCSSBCGGGGG---------CSSCCCCC---------CCSSEECCSSCSSSCEEE
T ss_pred CCCccccchhhhhhhcCCEEEEE-cccccccHHhcC---------CCCCccccCCccccCCCcccccccccCCCCCCCEE
Confidence 34457788999999999999963 333443332221 1122211100011222 445554433 256
Q ss_pred EEEcCc-eeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCC--------Cce-eEEEEEEcCCCCceeEEEecC
Q psy13339 139 VLKLSH-RIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDE--------NPT-LLGEFMYDSEGPTLQYFEAKM 208 (365)
Q Consensus 139 ~I~Ls~-~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~--------~~~-~Lg~f~Yd~~g~~~Q~F~v~~ 208 (365)
.|+|+. |-+|..|.|+=.. -...-|..++|-|+..+.++ .++ +|..-+ ..+...+.|.+..
T Consensus 97 IirLG~~pG~I~gveVDTa~-------F~GN~pp~vsvea~~~~~~~~~~~~~~~~W~~ilp~~~--l~p~~~h~f~v~~ 167 (355)
T 1o59_A 97 IIKMGVAAAHIIGGEIDTAF-------FNGNHAPFVSIEALYDEGEEGNIVEDDSRWVEIVEKFE--CGPSQRHLFVRGN 167 (355)
T ss_dssp EEECSSSCEEEEEEEEECTT-------CSSSBCSEEEEEEECCCSCCSCCCTTCTTCEEEEEEEE--CCTTCEEEEECTT
T ss_pred EEEcCCCCcEEEEEEEecCc-------ccCCCCCeEEEEEEecCCCcccccccCCCceEeecccc--cCCCcEeeEECcc
Confidence 899999 9999999998543 33457888999987654321 233 333222 2334667799876
Q ss_pred C--CcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC-CCCcccccccccccccccccceeeeccCCCCccccccccccc
Q psy13339 209 V--ADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP-SPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEEEKSNRSVA 285 (365)
Q Consensus 209 ~--~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 285 (365)
. ..++..|+|.+-=--| +-||||||+..+ +++...++-+.. ....|+.+. .+|.-.-..--|+|
T Consensus 168 ~~~~~~~THvRLniyPDGG------iaRlRvyG~~~~~d~~~~~~~~DLa----a~~~GG~vv--~~SD~~fg~~~NLl- 234 (355)
T 1o59_A 168 GLTKERFTHIKLKMYPDGG------IARFRLYGRVVPPELKTKDHIIDLA----YVCNGAVAL--KYSDQHFGSVDNLL- 234 (355)
T ss_dssp CSCSSCBSEEEEEEESCCE------ESEEEEEEEECCC------CCEETT----CGGGTCEEE--EESCCSEECGGGGG-
T ss_pred cCCCcceeEEEEEEecCCC------eeEEEEeccccCCCcccccccccee----ccccCCEEE--EEecccccCHHHcc-
Confidence 3 4578999999985555 789999999888 665332322221 124677777 33331111111121
Q ss_pred eeeeeccCCcCC------------CCCCCeeeeeCCeeEEEEEecc-eeEeeEEEEeecCCCCCCCCCCCCCCceeEEEE
Q psy13339 286 LTWVMFQSHRAG------------KMRTNGMAFQGAIGCLVLKLSH-RIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWV 352 (365)
Q Consensus 286 ~~~~~~~~p~~~------------~~pg~cw~f~g~~g~~~i~l~~-~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g 352 (365)
.|-.+ +.||+ .-.+.|+|.. |..|..|.|+= +. -...+|..++|.|
T Consensus 235 -------~Pg~g~~MgDGWETrRrR~pG~-------~DW~IvrLG~~~G~I~~ieVDT-----a~--FkGN~P~~vsi~a 293 (355)
T 1o59_A 235 -------LPGRGHDMSDGWETKRSRQPGH-------TDWAVIQLGRESSFIEKIIVDT-----AH--FRGNFPQFITVEG 293 (355)
T ss_dssp -------CSSSCSSGGGSEECCCCCSTTC-------CEEEEEECSSCCSEEEEEEEEC-----TT--CSSSCCSEEEEEE
T ss_pred -------CCCccccccccceecccCCCCC-------ccEEEEEccCCCcEEEEEEEEC-----Cc--ccCCCCCeEEEEE
Confidence 11000 24554 2335699997 99999998872 22 3557888899988
Q ss_pred eec
Q psy13339 353 SEH 355 (365)
Q Consensus 353 ~~~ 355 (365)
...
T Consensus 294 ~~~ 296 (355)
T 1o59_A 294 CLK 296 (355)
T ss_dssp ECC
T ss_pred Eec
Confidence 754
No 12
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=96.70 E-value=0.0014 Score=55.77 Aligned_cols=56 Identities=16% Similarity=0.148 Sum_probs=48.7
Q ss_pred CCCCCeeeeeCC-eeEEEEEecceeEeeEEEEee-cCCCCCCCCCCCCCCceeEEEEe
Q psy13339 298 KMRTNGMAFQGA-IGCLVLKLSHRIQVTRFSMEH-IPKTLTPNGIIDSAPKKFAVWVS 353 (365)
Q Consensus 298 ~~pg~cw~f~g~-~g~~~i~l~~~i~~~~~tleH-i~~~~~~~~~~~sapk~f~v~g~ 353 (365)
..|+.||+..|. ...|+|.|..++.++.|+|++ .++.+......+++|++|+.++-
T Consensus 35 g~~~T~W~s~g~~pq~i~I~~~~~~~is~~~i~~~~~k~~~ie~s~~~~p~~w~~i~~ 92 (139)
T 2yc2_A 35 GKDNTFWVTTGMFPQEFVLRLESCIRVSKITTLSLNVRKLAVEKCDQDKPDQFEKVFE 92 (139)
T ss_dssp SCTTCCEECCSSSCEEEEEEEEEEEEEEEEEEEEESEEEEEEEEECSSSCCCCEEEEE
T ss_pred CCCCCEEeCCCCCCeEEEEECCCceEEEEEEEEecCCcEEEEEEecCCCCCceEEEEE
Confidence 568999999976 589999999999999999998 66777777778889999998864
No 13
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=96.57 E-value=0.029 Score=46.13 Aligned_cols=111 Identities=11% Similarity=0.222 Sum_probs=75.8
Q ss_pred cCccccccccCCCCCeeecc-----CCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQ-----GAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~-----Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
.++..+|+.+. +..|... .....|.|.|.++..++.|.+..-... ....++.|+|....|... .
T Consensus 27 ~~~~~~~Dg~~--~t~w~~~w~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~------~~~~~~~~~i~~S~Dg~~---~ 95 (143)
T 2v72_A 27 DPASSAIDGNI--NTMWHTKWNGSDALPQSLSVNLGKARKVSSIAITPRTSG------NNGFITKYEIHAINNGVE---T 95 (143)
T ss_dssp BCGGGGSSSCT--TCCEECCTTSCSCSCEEEEEEEEEEEEEEEEEEECCSSC------CTTCEEEEEEEEEETTEE---E
T ss_pred ChHHhccCCCC--CCceecCCCCCCCCCEEEEEECCCCeEEeEEEEEecccC------CCCCEEEEEEEEEcCCCc---c
Confidence 45666776543 3444322 234589999999999999999864211 234689999998876543 4
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEe
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVH 238 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVh 238 (365)
.+....++.+ ...+.+.+.. ....++|+|.+++++| .|.++..|+|+
T Consensus 96 ~v~~g~~~~~-~~~~~~~f~~-p~~aRyvRi~~~~~~~--~~~~i~Ei~v~ 142 (143)
T 2v72_A 96 LVAEGTWEEN-NLVKTVTFDS-PIDAEEIKITAIQGVG--GFASIAELNVY 142 (143)
T ss_dssp EEEEEECCSS-SSCEEEEEEE-EEEEEEEEEEEEEEGG--GCCEESEEEEE
T ss_pred EEeEEEEcCC-CceEEEEeCC-CCcEEEEEEEEEEcCC--CeEEEEEEEEE
Confidence 5555555543 3445555543 2357999999999998 68999999987
No 14
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=96.38 E-value=0.028 Score=49.54 Aligned_cols=105 Identities=12% Similarity=0.129 Sum_probs=74.4
Q ss_pred CccccccccCCCCCeeec--cCC--c-eEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCcee
Q psy13339 114 SPRKAIQPGLLPGDCWAF--QGA--I-GCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTL 188 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f--~Gs--~-G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~ 188 (365)
++..+++.+ ++.+|-. .+. . =.|+|.|.++..++.|.|-.-...... -....||+++|++..|.. .+..
T Consensus 40 ~~~~liDgn--~~T~Wht~w~~~~~~P~~itIDLg~~~~v~~~~~~~r~~~~~~--~~~g~ik~~~I~~S~Dg~--~W~~ 113 (172)
T 3hnm_A 40 GVESLIDNN--PGTQWLCRWDVKEPLPYYFVFDMGKEYTLFRFGFANPVAPAAH--VWAGTSKAGYVEASIDNE--NWVK 113 (172)
T ss_dssp SGGGGSSSC--TTSCEECCCSSCCCSCEEEEEEEEEEEEEEEEEEECCCSSCTT--STTCCEEEEEEEEESSSS--CEEE
T ss_pred cHHHcCCCC--CCCeEEecCCCCCCCCEEEEEECCCceEEeEEEEEecCCCCcc--cCCCCeEEEEEEEEeCCC--CeEE
Confidence 456666554 5689977 322 2 379999999999999998765321100 014689999999987753 5899
Q ss_pred EEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCC
Q psy13339 189 LGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGN 226 (365)
Q Consensus 189 Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~ 226 (365)
|++++++..+...+.+.+.. ...++|+|.+++.+++
T Consensus 114 v~~~~~~~~~~~~~~~~~~~--~~aRYIR~~v~~g~~~ 149 (172)
T 3hnm_A 114 LKDWTSPKIGEPNVNMDVPA--TQARYIRFVITDTYPT 149 (172)
T ss_dssp EECCBCSSTTCSCEEEEEEE--EEEEEEEEEEEEECCC
T ss_pred eEEEEecCCCCceEEeecCC--CceEEEEEEEccCccc
Confidence 99999888764444444432 3579999999998874
No 15
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=96.14 E-value=0.11 Score=53.24 Aligned_cols=115 Identities=10% Similarity=0.122 Sum_probs=81.9
Q ss_pred CccccccccCCCCCeeeccCC-------ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCc
Q psy13339 114 SPRKAIQPGLLPGDCWAFQGA-------IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENP 186 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f~Gs-------~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~ 186 (365)
+|..|++.+ ++..|....+ .-.|+|.|.++..++.|.|.+-... ....+++|+|++..|.. .+
T Consensus 479 ~~~~a~DG~--~~T~w~s~~~~~~~~~~~~~i~vDLg~~~~i~~v~~~~r~~~------~~~~~~~y~i~~S~Dg~--~w 548 (601)
T 1w8o_A 479 RASNVIDGN--PSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNS------ANEQVADYEIYTSLNGT--TW 548 (601)
T ss_dssp CGGGGGSSC--TTCCEECCCSSTTCCCSCEEEEEEEEEEEEEEEEEEEECSSC------STTCBCEEEEEEESSSS--SC
T ss_pred ccceeeCCC--CCCcEecCCCCCCCCCCCeEEEEECCCcEEEeEEEEecCCCC------CCCceEEEEEEEECCCC--cc
Confidence 455666654 3578876632 3589999999999999999764211 12379999999887653 35
Q ss_pred ee-EEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 187 TL-LGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 187 ~~-Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
.. +..-++..++ ..|.+.++. ...++|+|.+++++|...+.+|..|+|||.+
T Consensus 549 ~~~v~~~~~~~~~-~~~~~~f~~--~~aRyvRi~~~~~~~~~~~~~i~Ei~v~g~~ 601 (601)
T 1w8o_A 549 DGPVASGRFTTSL-APQRAVFPA--RDARYIRLVALSEQTGHKYAAVAELEVEGQR 601 (601)
T ss_dssp EEEEEEEECCSCS-SCEEEEEEE--EEEEEEEEEECCBTTSCSCCEEEEEEEEECC
T ss_pred ceeeeeEEEcCCC-ceEEEEeCC--cceEEEEEEEEEcCCCCceEEEEEEEEEecC
Confidence 53 5555555442 345555542 4579999999999987689999999999963
No 16
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=95.35 E-value=0.06 Score=49.47 Aligned_cols=112 Identities=15% Similarity=0.040 Sum_probs=78.8
Q ss_pred cCCCCCeeeccCCce-EEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCc
Q psy13339 122 GLLPGDCWAFQGAIG-CLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPT 200 (365)
Q Consensus 122 ~~~pG~CW~f~Gs~G-~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~ 200 (365)
+.++...|-..|+.. .|+|++.+.+.+..+.+---.+. |-+=.|..+.|.+=....+- ..+...+.+.. .+
T Consensus 77 D~s~~TyWQSDG~qPH~ItI~f~k~v~I~~L~iyvD~~~-----DeSYtPs~I~V~aG~~~~dL--~e~~~v~l~~p-~G 148 (221)
T 1gqp_A 77 DDNYDTFWQSDGGQPHQLDIMFSKRMDICVMAIFFSMIA-----DESYAPSLVKVYAGHSPSDA--RFYKMLEVRNV-NG 148 (221)
T ss_dssp SSCTTCCEECCSSSSEEEEEEEEEEEEECEEEEEEEHHH-----HGGGSEEEEEEEEESSTTTC--EEEEEEEEEEC-EE
T ss_pred CCCccceeccCCCCCeEEEEEEcCCceEEEEEEEECCCC-----CCCCCCEEEEEEEeCCcCcc--eEEEEEEecCC-CE
Confidence 456778999988876 79999999999999998765431 33448999999876655443 34444444421 22
Q ss_pred eeEEEecCC-----CcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 201 LQYFEAKMV-----ADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 201 ~Q~F~v~~~-----~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
-....+... ......|++.|++||-|..-|.+..+||+|-.
T Consensus 149 Wv~i~l~d~~~~~~~l~~~~IQI~I~~nhqnGrDThIRqIkI~Gp~ 194 (221)
T 1gqp_A 149 WVALRFLDNREDDQLLKCQFIRLLFPVNHENGKDTHLRGIRLYVPS 194 (221)
T ss_dssp EEEECCC--------EEEEEEEEEEEEESTTCSSCEESCEEEEEEC
T ss_pred EEEEEccCCCCCCCeeEEEEEEEEEeeccCCCCccEEEEEEEEccC
Confidence 233333221 13456899999999999999999999999985
No 17
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=95.14 E-value=0.25 Score=42.74 Aligned_cols=111 Identities=7% Similarity=0.063 Sum_probs=74.5
Q ss_pred cCccccccccCCCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG 190 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg 190 (365)
.+|..|++.+ ++.+|+..+. ...|.|.|.++..++.|.|..-. ....++|.|.+..|.. .+..+.
T Consensus 44 ~~a~~AvDGn--~~T~W~s~~~~~~~Wi~VDLg~~~~v~~v~i~~~~---------~~~~~~y~IevS~Dg~--~W~~v~ 110 (161)
T 4a3z_A 44 NPLSNITDGD--LSSLWISDNGAMPANATIDLEGNNFVDFLELHFEK---------EGFRFQFKVEVEDESG--NRETVL 110 (161)
T ss_dssp CCGGGGSSSC--TTCCEEBGGGCSSEEEEEEEEEEEEEEEEEEECSS---------TTCCEEEEEEEECTTC--CEEEEE
T ss_pred CChhhcCcCC--CCCeEEcCCCCCCeEEEEECCCcEEEeEEEEEECC---------CCceEEEEEEEEcCCC--CEEEEE
Confidence 4577777664 6789998764 46899999999999999996421 1245789998875542 355554
Q ss_pred EEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCC----CCCceEEEEEEe
Q psy13339 191 EFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGN----IEYTCLYRFRVH 238 (365)
Q Consensus 191 ~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~----~~yTClYR~RVh 238 (365)
+.. +..+...++|.++. ....++|+|.+..+-++ ..+..|+-|.|+
T Consensus 111 ~~t-~~~~~~~~~~~~~~-~~~aRYVRv~~~~~~~~g~~~~~~~si~E~~V~ 160 (161)
T 4a3z_A 111 DMT-SNTEDNKKSYNIPV-KKEISKIHATITGKAPGGSFDQAWAAIAEIKAM 160 (161)
T ss_dssp ECT-TCCSCCCSEEEEEE-EEEEEEEEEEEEEECSCSTTTTCCCEESEEEEE
T ss_pred Eec-CCCCCccEEEEcCC-CcEEEEEEEEEEecCCCccccCCCCEEEEEEEe
Confidence 332 11222345555552 23579999999988654 245689999886
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.97 E-value=0.25 Score=51.06 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=86.3
Q ss_pred cCccccccccCCCCCeeeccCC-------ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCC
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQGA-------IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDEN 185 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~Gs-------~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~ 185 (365)
.+|..+++.+ ++..|+...+ .-.|+|.|.++..++.|.+..-... ....-+++|+|+...|.. .
T Consensus 42 ~~~~~~~Dg~--~~T~W~s~~~~~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~-----~~~~~~~~y~i~~S~Dg~--~ 112 (656)
T 1k3i_A 42 NECNKAIDGN--KDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDG-----NQNGWIGRHEVYLSSDGT--N 112 (656)
T ss_dssp SCGGGGSSSC--TTCCEECCCGGGCCCCSCEEEEEEEEEEEEEEEEEEECCCSS-----CCTTCBCEEEEEEESSSS--C
T ss_pred CcHHhcCCCC--CCCEEEeCCCCCCCCCCCceEEecCCCcEEEEEEEEEecccC-----CCCCCeeEEEEEEECCCC--C
Confidence 3566777654 4678988765 2589999999999999999975321 122369999999977653 3
Q ss_pred c-eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 186 P-TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 186 ~-~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
+ ..+.+.+++.++ ..|++.++. ...++|+|.++++.+...+..+..|.|+|..
T Consensus 113 w~~~v~~~~~~~~~-~~~~~~~~~--~~aRyvRi~~~~~~~~~~~~si~E~~v~~~~ 166 (656)
T 1k3i_A 113 WGSPVASGSWFADS-TTKYSNFET--RPARYVRLVAITEANGQPWTSIAEINVFQAS 166 (656)
T ss_dssp CCSCSEEEECCSSS-SCEEEEEEE--EEEEEEEEEECSBTTSCSCCEESEEEEEECS
T ss_pred cceeeeeeeecCCC-cceeeecCC--cceEEEEEEEecccccCCceeEEEEEEeecc
Confidence 5 667777776653 334544442 3579999999999987778999999999985
No 19
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=94.03 E-value=0.36 Score=51.59 Aligned_cols=114 Identities=13% Similarity=0.117 Sum_probs=79.4
Q ss_pred cCccccccccCCCCCeeeccC------CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCc
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQG------AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENP 186 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~G------s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~ 186 (365)
.+|..+++. +++..|...- ....|.|.|.++..++.|.+..-.. .....+++|+|....|.. .+
T Consensus 613 ~~a~~aiDG--n~~T~W~S~w~~~~~~~p~wl~VDLg~~~~V~~V~i~~r~~------~~~g~v~~y~I~~S~DG~--~W 682 (737)
T 2v5d_A 613 APASFASDG--DMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQD------SKNGRITGYKVSVSLDGE--NF 682 (737)
T ss_dssp BCGGGGGSS--CSSCCEECCCSSSCCCCCCEEEEEEEEEEEEEEEEEECCSS------CCTTEEEEEEEEEESSSS--CC
T ss_pred CCHHHccCC--CCCCceeccccCCCCCCCeEEEEECCCcEEEEEEEEEeccC------CCCCceEEEEEEEEcCCC--ce
Confidence 356666654 4566787541 2358999999999999999995321 112367899999976643 36
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecC-----CCCCCceEEEEEEee
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNH-----GNIEYTCLYRFRVHG 239 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~-----G~~~yTClYR~RVhG 239 (365)
..+++.++..+ ...+++.+.. ...++|+|.+++++ |+..+..++.|+|||
T Consensus 683 ~~v~~gt~~~~-~~~~~v~f~~--v~ARYVRi~~~~~~~~~~~G~~~~~siaE~~VyG 737 (737)
T 2v5d_A 683 TEVKTGTLEDN-AAIKFIEFDS--VDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG 737 (737)
T ss_dssp CCSEEEECCSS-SSCEEEEEEE--EEEEEEEEEEEEEECSSSSCTTTCCEESEEEEEC
T ss_pred EEEEeeeecCC-CceEEEEeCC--ceEEEEEEEEEeeccccccCCCCcEEEEEEEEEC
Confidence 66766665443 3455555542 35789999999886 445789999999998
No 20
>1xoy_A Hypothetical protein AT3G04780.1; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Arabidopsis thaliana} SCOP: b.18.1.26
Probab=93.66 E-value=0.28 Score=42.89 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=61.8
Q ss_pred eeccCCceE--EEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcC--CCCceeEE
Q psy13339 129 WAFQGAIGC--LVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDS--EGPTLQYF 204 (365)
Q Consensus 129 W~f~Gs~G~--L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~--~g~~~Q~F 204 (365)
|.-....-| +.|-+..+|.+.+|.|.= + .+ +|||.+.||.-.+.-+ ||. +..+.|++
T Consensus 51 ~leSD~DeQLli~IPFt~~VKl~Si~i~~------~-~~--~~Pk~iKlf~N~~~ld----------Fd~a~~~~p~Q~~ 111 (161)
T 1xoy_A 51 NLESDADEQLLIYIPFNQVIKLHSFAIKG------P-EE--EGPKTVKFFSNKEHMC----------FSNVNDFPPSDTA 111 (161)
T ss_dssp CEECSSCSSEEEEEEEEEEECEEEEEEEC------C-TT--TSEEEEEEEESCSCCC----------HHHHTTSCCSEEE
T ss_pred cCcCCCCceEEEEeecCCcEEEEEEEEEC------C-CC--CCCcEEEEeeCCCCCC----------hhhhccCCCceEE
Confidence 444444444 556688899999888871 2 13 7999999996543211 111 12345555
Q ss_pred EecCC-------------CcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 205 EAKMV-------------ADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 205 ~v~~~-------------~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
.+..+ -..++.+.|-|.+|||..+.|-||++++.|++
T Consensus 112 el~~~~~~g~~~~lr~vkFqnV~sLtlf~~~n~~g~e~T~I~~I~l~G~~ 161 (161)
T 1xoy_A 112 ELTEENLKGKPVVLKYVKFQNVRSLTIFIEANQSGSEVTKVQKIALYGST 161 (161)
T ss_dssp CCCTTGGGTCCEECCTTTCSCEEEEEEEEEEETTCCSCCEESEEEEEECC
T ss_pred ECCCCcCCCcEEeccceeEcccCEEEEEEecCCCCCccEEEEEEEEEecC
Confidence 54432 22356788889999977789999999999975
No 21
>1wwy_A Thioredoxin-like protein 1; structural genomics, hypothetical protein, regulatory protei apoptosis, cancer; NMR {Homo sapiens}
Probab=93.09 E-value=0.33 Score=42.82 Aligned_cols=100 Identities=14% Similarity=0.183 Sum_probs=61.0
Q ss_pred EEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEe-cCCC--C--CceeEEEEEEcCCC-CceeEEEecCC-
Q psy13339 137 CLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLR-EKYD--E--NPTLLGEFMYDSEG-PTLQYFEAKMV- 209 (365)
Q Consensus 137 ~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~-~~~~--~--~~~~Lg~f~Yd~~g-~~~Q~F~v~~~- 209 (365)
-+.|-+..+|.+.+|.|.= + +-.+|||.+.||.-. +.-+ . .....=+++...+. ...+.+++.-.
T Consensus 52 li~IPFt~~VKl~Si~i~~------~--~~~~~Pk~iKlf~N~~~~ldFd~a~~~~p~Q~~eL~~~~~~~g~~~~Lr~vk 123 (171)
T 1wwy_A 52 LITVAFNQPVKLYSMKFQG------P--DNGQGPKYVKIFINLPRSMDFEEAERSEPTQALELTEDDIKEDGIVPLRYVK 123 (171)
T ss_dssp EEEEEEEEEEEEEEEEECC------C--SSSCCBCEEEEEESCSSCCCTTHHHHSCCSSCEECCTTTSSTTCCEECCTTT
T ss_pred EEEeecCCcEEEEEEEEEC------C--CCCCCCcEEEEeecCCCCcChhhhccCCCceEEEcCCcccCCCcEEEccceE
Confidence 4566688899998888851 1 235799999999764 2211 0 00000112222211 01123444332
Q ss_pred CcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCC
Q psy13339 210 ADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPS 244 (365)
Q Consensus 210 ~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~ 244 (365)
-..++.+.|-|.+|+|..+.|-||++++.|++...
T Consensus 124 FqnV~sLtlf~~~n~~g~e~T~I~~I~l~Ge~~~~ 158 (171)
T 1wwy_A 124 FQNVNSVTIFVQSNQGEEETTRISYFTFIGTPVQA 158 (171)
T ss_dssp CTTEEEEEEEECCBTTCCSSCCBCCEEEEEEESSC
T ss_pred EcccCEEEEEEecCCCCCccEEEEEEEEEeEecCc
Confidence 22357788889999977789999999999998654
No 22
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=92.26 E-value=2 Score=36.20 Aligned_cols=105 Identities=10% Similarity=0.058 Sum_probs=71.6
Q ss_pred CccccccccCCCCCeeeccC-CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeE-EE
Q psy13339 114 SPRKAIQPGLLPGDCWAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLL-GE 191 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f~G-s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~L-g~ 191 (365)
.|..|++.+ ++..|+... ..+++.|.|.++..++.|.++-.. ..+++|+|..-.|.. .+..+ ..
T Consensus 42 ~a~~aiDGn--~~T~W~s~~~~~p~~~VDLg~~~~V~~v~i~~~r----------~~v~~y~I~~S~DG~--~W~~~~~~ 107 (149)
T 4a42_A 42 EANNLRDGN--ENTLWVPGQEEEKSVTFDLSKEKDISAIDIVSKG----------NSPLKYSIEISNDGT--EWTKIVDE 107 (149)
T ss_dssp GGGGGGSSC--TTSCBCCCSCSSEEEEEEEEEEEECCEEEEEECS----------SSCCCEEEEEESSSS--SCEEEEEE
T ss_pred ChHhcEeCC--CCCEEEcCCCCCCeEEEECCCcEEEEEEEEEcCC----------CCcEEEEEEEEcCCC--eEeEeEEc
Confidence 456666554 566898875 467899999999999999995211 128999998765542 34432 22
Q ss_pred EEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEee
Q psy13339 192 FMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHG 239 (365)
Q Consensus 192 f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG 239 (365)
-+++. ....+++.+.. ....++|+|.++++ +..|..|+||+
T Consensus 108 g~~~~-~~~~~~~~f~~-pv~aRYVRi~~~~~-----~~si~E~~Vy~ 148 (149)
T 4a42_A 108 NNNEE-NKAVYSNILKS-GKIGRFVRFNFNSE-----NVKIGEIKIYK 148 (149)
T ss_dssp TTCCC-CCSEEEEECCT-TCEEEEEEEEECSS-----SCCEEEEEEEE
T ss_pred ceeCC-CCceEEEEcCC-CceEEEEEEEEecC-----CcEEEEEEEEC
Confidence 22222 24467777654 34579999999988 57799999985
No 23
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=91.66 E-value=2.8 Score=35.63 Aligned_cols=118 Identities=11% Similarity=-0.028 Sum_probs=72.2
Q ss_pred CccccccccCC----CCCeeecc-CCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCC--CCc
Q psy13339 114 SPRKAIQPGLL----PGDCWAFQ-GAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYD--ENP 186 (365)
Q Consensus 114 ~P~~aL~p~~~----pG~CW~f~-Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~--~~~ 186 (365)
.|..|.+.+.. .|.|.... .....+.|.|.+...|+.|.|.+-.-. -....+.|+|..-.+... -..
T Consensus 32 ~a~~AvDGn~~t~w~s~sc~~T~~~~~~W~~VDLg~~~~V~~V~i~~r~d~------~~~r~~~~~i~v~~s~~~~~~~n 105 (158)
T 1k12_A 32 EASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTITNRGDC------CGERISGAEINIGQHLASNGVNN 105 (158)
T ss_dssp CGGGGGSSCCCCCGGGSCSCCBCSCSSCEEEEEEEEEEEEEEEEEEECSSS------CTTTTTTCEEEEESSCTTTTTTS
T ss_pred CccccCcCCCCCccccccEecCCCCCCCEEEEECCCceEEeEEEEEeCCCc------CccccCCEEEEEEcCCccccccC
Confidence 56777776543 35666543 345689999999999999999875311 122345566654332221 111
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 243 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~ 243 (365)
.+.+. .++.......+|.+.. ....++|+|++..+ .+-.|+.|+|||.+++
T Consensus 106 ~~~~~-~~~~~~g~~~~i~~~~-~~~gRYVrv~~~g~----~~lsl~EveVyg~~~~ 156 (158)
T 1k12_A 106 PECSV-IGSMATGETKTFHCPA-PMIGRYVVTYLPTS----ESLHLCEVEVNVDKPA 156 (158)
T ss_dssp CEEEE-CCCCCTTCEEEEEEEE-EEEEEEEEEECCSS----SCCCEEEEEEEEEEEC
T ss_pred ceeee-ecccCCCCEEEEECCC-CCeeEEEEEEECCC----CeEEEEEEEEecccCC
Confidence 23333 2333323346666632 24478999999754 5688999999998754
No 24
>1o59_A Allantoicase; YIR029W, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics, hydrolase; 2.40A {Saccharomyces cerevisiae} SCOP: b.18.1.22 b.18.1.22 PDB: 1sg3_A
Probab=91.16 E-value=3.8 Score=39.98 Aligned_cols=134 Identities=15% Similarity=0.200 Sum_probs=84.7
Q ss_pred cccceeeeccCCceeeccccCcccCCCCceeeecccccccccCccccccccC--CCCCeeeccCCc-----eEEEEEcCc
Q psy13339 72 SWLGHILRRDCGSVIDIRCTETYTLKDPYYVLFGYALWRRDSSPRKAIQPGL--LPGDCWAFQGAI-----GCLVLKLSH 144 (365)
Q Consensus 72 ~w~dhAlr~~Ga~vv~~~tS~ty~~~~~~~~~~g~~~~~~~~~P~~aL~p~~--~pG~CW~f~Gs~-----G~L~I~Ls~ 144 (365)
+.+|-|....|++++. +|.-|- .+|+.+|.|.. .-|+-|.....+ =...|+|+.
T Consensus 206 ~~~DLaa~~~GG~vv~--~SD~~f-----------------g~~~NLl~Pg~g~~MgDGWETrRrR~pG~~DW~IvrLG~ 266 (355)
T 1o59_A 206 HIIDLAYVCNGAVALK--YSDQHF-----------------GSVDNLLLPGRGHDMSDGWETKRSRQPGHTDWAVIQLGR 266 (355)
T ss_dssp CCEETTCGGGTCEEEE--ESCCSE-----------------ECGGGGGCSSSCSSGGGSEECCCCCSTTCCEEEEEECSS
T ss_pred cccceeccccCCEEEE--Eecccc-----------------cCHHHccCCCccccccccceecccCCCCCccEEEEEccC
Confidence 4466666667776663 332221 24555665544 235667766432 457899997
Q ss_pred -eeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCC-------Cce-eEEEEEEcCCCCceeEEEecCCCcceeE
Q psy13339 145 -RIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDE-------NPT-LLGEFMYDSEGPTLQYFEAKMVADTFDM 215 (365)
Q Consensus 145 -~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~-------~~~-~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~ 215 (365)
|-.|..|.|+=.. -....|..++|.|+.-+..+ .+. +|..-. ..+.....|.+.. ..++..
T Consensus 267 ~~G~I~~ieVDTa~-------FkGN~P~~vsi~a~~~~~~~~~~~~~~~W~~llp~t~--l~pd~~H~f~~~~-~~~~TH 336 (355)
T 1o59_A 267 ESSFIEKIIVDTAH-------FRGNFPQFITVEGCLKESESSENTGEGTWVELVGKSK--TGPDKEHVYEIRK-SIRVSH 336 (355)
T ss_dssp CCSEEEEEEEECTT-------CSSSCCSEEEEEEECC-----------CEEEEEEEEE--CCTTCEEEEEEEE-ECCCSE
T ss_pred CCcEEEEEEEECCc-------ccCCCCCeEEEEEEecCCCcccccccCCCeEeccCcc--cCCCceeeeecCC-CCceEE
Confidence 9999999999543 44568999999998643211 122 233322 2234567787744 457899
Q ss_pred EEEEEeecCCCCCCceEEEEEEeee
Q psy13339 216 VELKILSNHGNIEYTCLYRFRVHGN 240 (365)
Q Consensus 216 V~lri~SN~G~~~yTClYR~RVhG~ 240 (365)
|+|.|-=-- .+-||||||.
T Consensus 337 vRL~I~PDG------GVaRlRv~G~ 355 (355)
T 1o59_A 337 VKLTIIPDG------GVKRIRVWGY 355 (355)
T ss_dssp EEEEEESCC------EECEEEEEEC
T ss_pred EEEEEECCC------ceEEEEEeeC
Confidence 999997544 5889999995
No 25
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=90.96 E-value=8.2 Score=35.77 Aligned_cols=199 Identities=12% Similarity=0.026 Sum_probs=109.1
Q ss_pred ccccccccCC----CCCeeeccC-CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCC---CCc
Q psy13339 115 PRKAIQPGLL----PGDCWAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYD---ENP 186 (365)
Q Consensus 115 P~~aL~p~~~----pG~CW~f~G-s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~---~~~ 186 (365)
|..|++.+.. .+.|....+ ....+.|.|.++..|+.|.|.+-.-. -....+.|+|....+... ...
T Consensus 25 a~~AvDG~~~t~W~s~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~r~d~------~~~~~~~~~i~v~~s~d~~~~~n~ 98 (293)
T 3cqo_A 25 AYNAIDGNRNSDFEAGSCTHTVEQTNPWWRVDLLEPYIVTSITITNRGDC------CPERLNGVEIHIGNSLQENGVANP 98 (293)
T ss_dssp GGGGGSSCCCCCGGGSCSCCBCSBSSCEEEEEEEEEEEEEEEEEECCSSS------CGGGGTTEEEEEESCCGGGGTTSC
T ss_pred cCccccCCCCCccCCCceecCCCCCCCEEEEECCCceEEEEEEEEeCCCC------ccccccCeEEEEecCCccCCccCc
Confidence 6777776543 344554433 35689999999999999999974211 011234444433222111 112
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCccccccccccccccccccee
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMT 266 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (365)
. .+. .++......+++.++. ....++|+|++..+. .+-+|+.|.|||.+.|... |+..|.+
T Consensus 99 ~-~~~-~~~~~~g~~~~~~~~~-~~~gRYVrv~~~~~~---~~~sl~EveVyg~~~~~~~-------------nlA~~k~ 159 (293)
T 3cqo_A 99 R-VGV-ISHIPAGISHTISFTE-RVEGRYVTVLLPGTN---KVLTLCEVEVHGYRAPTGE-------------NLALKGK 159 (293)
T ss_dssp E-EEE-ESCCCTTCEEEEECSS-CCEEEEEEEECCSSS---BCCCCSEEEEEEEECCCSS-------------CGGGGSE
T ss_pred e-ecc-eeecCCCceEEEEeCC-CceeeEEEEEecCCC---cceEEEEEEEEeccCCCCc-------------cccCCcc
Confidence 2 222 3333334557777743 245799999987654 3578999999999876433 5555655
Q ss_pred eeccCCCCccccccccccceeeeeccCCcCCCCCCCeeeeeC-CeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCC
Q psy13339 267 SSKYNPSGTEEEKSNRSVALTWVMFQSHRAGKMRTNGMAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAP 345 (365)
Q Consensus 267 ~~~~~~s~~~~~~~~~~~~~~~~~~~~p~~~~~pg~cw~f~g-~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sap 345 (365)
+. .+|. +.. + -......- ++...-.+|.|-.=.+ ..--+.|.|-.+..|+.|.|.+- .. -..--
T Consensus 160 ~t--aSS~-~~~-~--~a~~AvDG--~~~t~W~~~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~~-d~------~~~~~ 224 (293)
T 3cqo_A 160 AT--QSSL-FES-G--IAYNAIDG--NQANNWEMASCTHTKNTMDPWWRMDLSQTHRVFSVKVTNR-DS------FEKRI 224 (293)
T ss_dssp EE--ESCC-CTT-C--CGGGGGSS--CCCCSGGGTCCCCCCSEESCEEEEEEEEEEEEEEEEEECC-SS------SGGGG
T ss_pred ee--cCCC-CCC-C--CccccccC--CCCCccccCccccCCCCCCCEEEEECCCeEEEeEEEEEcc-Cc------ccccc
Confidence 53 2222 100 0 00000000 0000112344432222 24579999999999999999875 21 11234
Q ss_pred ceeEEEEe
Q psy13339 346 KKFAVWVS 353 (365)
Q Consensus 346 k~f~v~g~ 353 (365)
++|+|.+.
T Consensus 225 ~~~~i~vs 232 (293)
T 3cqo_A 225 NGAEIRIG 232 (293)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEe
Confidence 67777764
No 26
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=90.84 E-value=2.8 Score=45.86 Aligned_cols=114 Identities=11% Similarity=0.132 Sum_probs=78.2
Q ss_pred cCccccccccCCCCCeeeccCCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEE
Q psy13339 113 SSPRKAIQPGLLPGDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEF 192 (365)
Q Consensus 113 ~~P~~aL~p~~~pG~CW~f~Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f 192 (365)
.+|..|++. +++..|+.......|.|.|.++..|+.|.+.. . ..+.+.|.|.+..|.. .+..+.+-
T Consensus 42 ~~p~nAvDG--n~~T~WsS~~~~qWLqVDLG~~~~V~~V~l~~--~--------~~~v~~Y~Ie~S~DG~--~Wt~v~~~ 107 (914)
T 4a4a_A 42 NTADLAIDG--DLSTYWESSNDYKWIEVDLGGIYELSKIEIFN--K--------DEAVYKYNIYASEDGE--NFNKIAYK 107 (914)
T ss_dssp CCGGGGSSS--CTTCCEECCSSCCEEEEEEEEEEEEEEEEEEC--S--------SSSCEEEEEEEESSSS--CCEEEEEE
T ss_pred CcHHHeECC--CCCCeEecCCCCceEEEECCCeEEEEEEEEEe--c--------CCceEEEEEEEEcCCC--CeEEEEEc
Confidence 467777644 46789998855568999999999999999962 1 1356799998876653 35666543
Q ss_pred E-EcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC
Q psy13339 193 M-YDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 243 (365)
Q Consensus 193 ~-Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~ 243 (365)
. .+.+....++..+.. ...++|+|.+++|-++ ....|+.|+|||....
T Consensus 108 t~~~~~~~~~d~v~f~p--v~ARYVRL~~t~~~~~-~~~SI~EfeVyG~~~g 156 (914)
T 4a4a_A 108 NNDNVSDSNGNMHTIDN--VRAGKIRIDVVQNSNS-DRVNIAEINVFGKNTG 156 (914)
T ss_dssp CSCCCCCTTCEEEEEEE--EEEEEEEEEEEEETTC-SSCEESEEEEEEEECS
T ss_pred ccCccCCCccceEEeCC--ceEEEEEEEEEecCCC-CceEEEEEEEEcCCCC
Confidence 2 111111123333322 3479999999988875 5789999999998543
No 27
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=90.79 E-value=1.2 Score=45.03 Aligned_cols=115 Identities=15% Similarity=0.126 Sum_probs=77.5
Q ss_pred CccccccccCCCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEE
Q psy13339 114 SPRKAIQPGLLPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGE 191 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~ 191 (365)
.|..|++. ..+.-|+..++ ...|.|.|.++..++.|.|+.-.. ...--+.|.|.+..|.. .+..|.+
T Consensus 344 ~~~~a~Dg--d~~TyW~a~~~~~~~wl~vDLg~~~~vn~V~lqe~i~-------~gqrv~~y~Ve~s~DG~--~W~~v~~ 412 (469)
T 3eyp_A 344 SPEKMLDN--EKNTYFAGKDGEVKADIIFTLPKTIEFDCLMIEEVIE-------LGHRTTKWSVEYTVDGK--NWITIPE 412 (469)
T ss_dssp CGGGGGSC--CSSCCEECCTTCCCEEEEEEEEEEEEEEEEEEEECGG-------GCSCEEEEEEEEESSSS--CCEECGG
T ss_pred ChhhcccC--CCCceEeCCCCCCCcEEEEECCCCcEEeEEEEeeccc-------CCCCeEEEEEEEEcCCC--ceEEEEe
Confidence 45555544 45789999874 568999999999999999986421 12346788888776542 2444433
Q ss_pred EE-EcCCC-CceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCC
Q psy13339 192 FM-YDSEG-PTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPS 246 (365)
Q Consensus 192 f~-Yd~~g-~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~ 246 (365)
-+ +...| ..+-.|+ . ...++|+|+|+++-|. -||+.|+||+.+..-.+
T Consensus 413 gt~~~tiG~kr~~~f~--~--v~aryVRl~i~~~~g~---p~Ise~~Vy~a~~~~~~ 462 (469)
T 3eyp_A 413 ATDKQAIGHKWIVRLA--P--VKAKQVRLRIQDGKAC---PAIHTFGVYKQSPVFKE 462 (469)
T ss_dssp GSSBCCCTTCEEEEEE--E--EEEEEEEEEEEEESSS---CEEEEEEEECCCTTC--
T ss_pred cccccCCCceeEEecC--C--eeEEEEEEEEEcCCCC---eEEEEEEEEcCCccccc
Confidence 22 22333 3455554 2 3469999999999886 48999999988755443
No 28
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=90.32 E-value=6.9 Score=36.90 Aligned_cols=179 Identities=12% Similarity=0.011 Sum_probs=95.1
Q ss_pred CCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEE----EEEc--C
Q psy13339 125 PGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGE----FMYD--S 196 (365)
Q Consensus 125 pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~----f~Yd--~ 196 (365)
++.+||.... ...|.|.|.++..|+.|.++.....- .....-.+.|.|....|.. .+..+.+ -.|. .
T Consensus 43 ~~~~W~~~~~~~~qwlqVDLg~~~~v~~v~tqg~~~~~---~~~~~~v~~y~i~~S~Dg~--~W~~~~~~~~~~~f~GN~ 117 (318)
T 2qqi_A 43 PENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKE---TKKKYYVKTYKIDVSSNGE--DWITIKEGNKPVLFQGNT 117 (318)
T ss_dssp SSCCBCCSSCCTTCCEEEEEEEEEEEEEEEEECEECTT---TCCEEEEEEEEEEEESSSS--SCEECEETTEECCEECCS
T ss_pred CCCeEcCCCCCCCceEEEccCCcEEEEeeeeeccccCC---CCccEeEEEEEEEEecCCC--eEEEEeCCCeeEEEECCc
Confidence 4678998764 45899999999999999998643110 0011234566665544432 2332211 1122 2
Q ss_pred CCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCCCcc
Q psy13339 197 EGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTE 276 (365)
Q Consensus 197 ~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 276 (365)
+.....+-.+.. ....++|+|..++-++. -|+ ||-|+|-....... ..+.|+..-.-..++.-
T Consensus 118 d~~~~v~~~l~~-pi~aRyVRi~p~~~~~~---~~l-r~ElyGc~~~~~~c------------~~plGmesg~i~d~~it 180 (318)
T 2qqi_A 118 NPTDVVVAVFPK-PLITRFVRIKPATWETG---ISM-RFEVYGCKITDYPC------------SGMLGMVSGLISDSQIT 180 (318)
T ss_dssp SSSSCEEEEEEE-EEEEEEEEEEEEEEESS---CCB-EEEEEEECGGGSTT------------CEECSTTTSCSCGGGEE
T ss_pred CCCceeEeccCC-CeeEEEEEEEEeeccce---eEE-EEEecccccccccc------------cccccccCCcccccccc
Confidence 222222222222 13468999999987764 788 99999986542110 01122110000000000
Q ss_pred ccccccccceeeeeccCCcCC--CCCCCeeee-----eCCeeEEEEEecceeEeeEEEEeecC
Q psy13339 277 EEKSNRSVALTWVMFQSHRAG--KMRTNGMAF-----QGAIGCLVLKLSHRIQVTRFSMEHIP 332 (365)
Q Consensus 277 ~~~~~~~~~~~~~~~~~p~~~--~~pg~cw~f-----~g~~g~~~i~l~~~i~~~~~tleHi~ 332 (365)
.+-+++ ....|..+ ...+..|+- ....-.|.|.|-.+..|++|.++.-+
T Consensus 181 ASS~~~-------~~~~p~~arl~~~~~~W~~~~a~~~~~~qwLqVDLg~~~~Vt~V~tqg~~ 236 (318)
T 2qqi_A 181 SSNQGD-------RNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGK 236 (318)
T ss_dssp ETTTTS-------TTCCGGGGBTTCCCCSCSBCCCTTCCSCCCEEEEEEEEEEEEEEEEEECC
T ss_pred cccccc-------cccCchhhhhcccCCceeCcccccCCcCcEEEEeCCCceEEEEEEEcCcc
Confidence 111111 00112211 123566763 22456899999999999999998754
No 29
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=87.95 E-value=7.4 Score=32.58 Aligned_cols=119 Identities=9% Similarity=0.010 Sum_probs=69.1
Q ss_pred cCccccccccCC----CCCeeeccC-CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 113 SSPRKAIQPGLL----PGDCWAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 113 ~~P~~aL~p~~~----pG~CW~f~G-s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
.+|..|++.+.. .|.|.-..+ ....+.|.|.++..|+.|.|-+-.-. ....--+.|+|..-.++. ..+.
T Consensus 27 ~~a~~AvDG~~~t~W~~~~ct~t~~~~~~W~~VDLg~~~~v~~V~i~~~~d~-----~~~~r~~~~~I~vs~~dg-~~w~ 100 (153)
T 3lei_A 27 GAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLGKTENVGKVKLYNRGDG-----NVANRLSNFDVVLLNEAK-QEVA 100 (153)
T ss_dssp CCGGGGGSSCCCCCGGGTCSCCCCSBTTCEEEEEEEEEEEEEEEEEEECCST-----TCGGGSCSEEEEEECTTC-CEEE
T ss_pred CCccccccCCCCCccccCccccCCCCCCCeEEEECCCceEEeEEEEEeCCCC-----cccccceeEEEEEECCCC-Cccc
Confidence 367777776543 344542232 35689999999999999999543210 011224678874332221 1122
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCC
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPS 244 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~ 244 (365)
.. +.-+..+....++.++. ...++|+|++..+.+ +-.|+.|.|||.+...
T Consensus 101 ~~--~~~~~~~~~~~~~~~~~--~~~RYVri~~~~~~~---~~sl~EveVyg~~~~~ 150 (153)
T 3lei_A 101 RQ--HFDSLNGKAELEVFFTA--KDARYVKVELKTKNT---PLSLAEVEVFRSATTQ 150 (153)
T ss_dssp EE--EESCCTTCSEEEEEEEE--EEEEEEEEEECSTTB---CCCEEEEEEEEBCC--
T ss_pred cc--eeecCCCCCeEEEEeCC--eEEEEEEEEeeCCCC---cEEEEEEEEEcCcccc
Confidence 11 22222234444555433 347999999987654 5789999999987543
No 30
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=83.82 E-value=18 Score=30.29 Aligned_cols=113 Identities=12% Similarity=0.046 Sum_probs=70.3
Q ss_pred cCccccccccCC----CCCeeeccC-CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 113 SSPRKAIQPGLL----PGDCWAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 113 ~~P~~aL~p~~~----pG~CW~f~G-s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
..|..|++.+.. .|.|....+ ....+.|.|.+...|+.|.|.+-.-. -..--+.|+|..-.+. . ..
T Consensus 33 ~~a~~AvDGn~~t~w~~~sct~t~~~~~~W~~VDLg~~~~V~~V~i~~r~d~------~~~r~~~~~I~v~~~~--~-~~ 103 (151)
T 2j1v_A 33 GDPNRAVDGNRNGNFNSGSVTHTRADNPSWWEVDLKKMDKVGLVKIYNRTDA------ETQRLSNFDVILYDNN--R-NE 103 (151)
T ss_dssp CCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEEEEEEEEEEEEEECCSS------CGGGSCSEEEEEECTT--C-CE
T ss_pred CCcCccEeCCCcCcccccccccCCCCCCCEEEEECCCCeEcCEEEEEcCCCc------cccccCCEEEEEECCC--C-Cc
Confidence 367778876543 366765544 35799999999999999999875211 1123456777654332 1 22
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeee
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN 240 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~ 240 (365)
..+ ......+....++.++. ...++|+|++.. +..+..|+.|.|||.
T Consensus 104 ~~~-~~~~~~~g~~~~~~~~~--~~gRYVrv~~~g---~~~~lsL~EveVyg~ 150 (151)
T 2j1v_A 104 VAK-KHVNNLSGESVSLDFKE--KGARYIKVKLLT---SGVPLSLAEVEVFRE 150 (151)
T ss_dssp EEE-EEECCCSSSEEEEEEEE--EEEEEEEEEESS---TTCCCCEEEEEECCC
T ss_pred eEe-eEEcCCCCCEEEEecCC--eeEEEEEEEEEC---CCCceEEEEEEEEcC
Confidence 333 22322222334444432 357899999974 446789999999985
No 31
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=83.75 E-value=4.3 Score=37.75 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=70.5
Q ss_pred CccccccccCC----CCCeeeccCC-ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCC---CCC
Q psy13339 114 SPRKAIQPGLL----PGDCWAFQGA-IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKY---DEN 185 (365)
Q Consensus 114 ~P~~aL~p~~~----pG~CW~f~Gs-~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~---~~~ 185 (365)
+|..|++.+.. .|.|-...+. ...+.|.|.++..|+.|.|.+-. . .....+.|+|.+-.+.. ...
T Consensus 170 ~a~~AvDG~~~t~W~~~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~~d-~------~~~~~~~~~i~vs~s~~~~~~~n 242 (293)
T 3cqo_A 170 IAYNAIDGNQANNWEMASCTHTKNTMDPWWRMDLSQTHRVFSVKVTNRD-S------FEKRINGAEIRIGDSLDNNGNHN 242 (293)
T ss_dssp CGGGGGSSCCCCSGGGTCCCCCCSEESCEEEEEEEEEEEEEEEEEECCS-S------SGGGGTTEEEEEESCCGGGGTTS
T ss_pred CccccccCCCCCccccCccccCCCCCCCEEEEECCCeEEEeEEEEEccC-c------cccccCCeEEEEeccCccccccC
Confidence 56666665432 2333222222 45899999999999999999751 1 11245788888753322 223
Q ss_pred ceeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC
Q psy13339 186 PTLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 243 (365)
Q Consensus 186 ~~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~ 243 (365)
+... ..++.......+|.++. ...++|+|++..+- .+-.|+.|.|||.+.+
T Consensus 243 ~~~~--~~~~~~~~~~~~~~~~~--~~~RYVrv~~~~~~---~~~sl~EveVyg~~~~ 293 (293)
T 3cqo_A 243 PRCA--VITSIPAGASTEFQCNG--MDGRYVNIVIPGRE---EYLTLCEVEVYGSVLD 293 (293)
T ss_dssp CEEE--EECCCCTTCEEEEEEEE--EEEEEEEEECTTSE---ECCCCSEEEEEEECCC
T ss_pred ceee--eecccCCCCEEEEEcCC--eeEEEEEEEecCCC---ccEEEEEEEEeccCCC
Confidence 3432 22333323334454332 34689999988652 3688999999998754
No 32
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=82.96 E-value=10 Score=38.36 Aligned_cols=104 Identities=13% Similarity=0.113 Sum_probs=72.2
Q ss_pred ccccccccCCCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEE
Q psy13339 115 PRKAIQPGLLPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEF 192 (365)
Q Consensus 115 P~~aL~p~~~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f 192 (365)
|..|++. +.+.-|+...+ .+.|.|.|.++..++.|.|+.-- .....-+.|.|.+..|.. .+..|.+-
T Consensus 370 ~~~a~Dg--n~~TyW~a~~~~~~~~l~idLg~~~~~n~v~IqE~i-------~~gqRV~~y~Ve~~~dgg--~W~~va~g 438 (478)
T 3ues_A 370 AAHLVDG--NRDTFWRPDADDAAPAITLTLPQPTTINAIVIEEAI-------EHGQRIEHLRVTGALPDG--TERVLGQA 438 (478)
T ss_dssp GGGGSSS--CTTCCBCCCTTCSSCEEEEEEEEEEEEEEEEEEECG-------GGCCCEEEEEEEEECTTS--CEEEEEEE
T ss_pred hhhcccC--CCCceEeCCCCCCCeeEEEECCCCcEEEEEEEeecc-------cCCCceEEEEEEEEeCCC--CEEEEEec
Confidence 4444433 45678988753 57899999999999999998531 112346788888876532 36667654
Q ss_pred EEcCCC-CceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEe
Q psy13339 193 MYDSEG-PTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVH 238 (365)
Q Consensus 193 ~Yd~~g-~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVh 238 (365)
+ .-| +.+-.|+ . ...++|+|+|++.-|.+ ||..|+||
T Consensus 439 t--tiG~kri~~f~--~--v~ar~VRl~I~~s~~~p---~Ise~~vY 476 (478)
T 3ues_A 439 G--TVGYRRILRFD--D--VEVSSVTLHVDGSRLAP---MISRAAAV 476 (478)
T ss_dssp S--CCTTCEEEEEE--E--EEEEEEEEEEEEESSSC---CEEEEEEE
T ss_pred c--ccCceEEEEeC--C--eeeEEEEEEEeccCCCe---EEEEEEEE
Confidence 2 223 3455664 2 34799999999998874 89999998
No 33
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=82.18 E-value=21 Score=30.93 Aligned_cols=110 Identities=11% Similarity=0.027 Sum_probs=66.4
Q ss_pred CCCeeeccCC------ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EE
Q psy13339 125 PGDCWAFQGA------IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EF 192 (365)
Q Consensus 125 pG~CW~f~Gs------~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f 192 (365)
.+.+||.... .-.|.|.|.++..|+.|.++.-... +....-.+.|.|.-..|.. .+...- -|
T Consensus 56 ~~~aW~a~~~~~~d~~~qWLQVDLg~~~~VtgV~tQG~~~~----~~~~~~vt~Y~l~yS~Dg~--~W~~y~~~~~~kvF 129 (178)
T 2wuh_A 56 GDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAG----GHGIEFAPMYKINYSRDGT--RWISWRNRHGKQVL 129 (178)
T ss_dssp TTSSBCCSSCBBTTBCCCCEEEEEEEEEEEEEEEEECCCGG----GTCCCCCSEEEEEEESSSS--SCEECCCTTSCCCE
T ss_pred CCCeecCCcCCCCCCCCCEEEEecCCceEEeEEEEecccCC----CCccceeEEEEEEEEcCCC--cEEEEecCCccccc
Confidence 4789998865 4579999999999999999975311 0112346788876555442 121111 12
Q ss_pred EEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCC
Q psy13339 193 MYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPS 244 (365)
Q Consensus 193 ~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~ 244 (365)
.=+.+........+.. ....++|+|..++=+++ +-|+ ||-|+|-...+
T Consensus 130 ~GN~D~~t~v~~~l~~-pi~ARyVRi~p~~w~~~--~i~l-RvElyGC~~~d 177 (178)
T 2wuh_A 130 DGNSNPYDIFLKDLEP-PIVARFVRFIPVTDHSM--NVCM-RVELYGCVWLD 177 (178)
T ss_dssp ECCSSSSSCEEEEEEE-EEEEEEEEEEEECSSCB--CCCB-EEEEEEEECC-
T ss_pred cccCCCCceEEEeCCC-CeEEEEEEEEEEeecCC--CeEE-EEEEeccccCC
Confidence 2222322322222222 13468999999986653 3566 99999987643
No 34
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=79.17 E-value=26 Score=32.93 Aligned_cols=178 Identities=11% Similarity=0.039 Sum_probs=93.8
Q ss_pred CCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEE------EEEcCC
Q psy13339 126 GDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGE------FMYDSE 197 (365)
Q Consensus 126 G~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~------f~Yd~~ 197 (365)
+.+||.... .-.|.|.|.++..|+.|.++.....- .....-.+.|.|....|.. .+..+-+ |.=+.+
T Consensus 45 ~~~W~~~~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~---~~~~~~v~~y~l~~S~dg~--~W~~~~~~~~~~~f~Gn~d 119 (325)
T 2qqj_A 45 DNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISRE---TQNGYYVKSYKLEVSTNGE--DWMVYRHGKNHKVFQANND 119 (325)
T ss_dssp SCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTT---TCCEEEEEEEEEEEESSSS--SCEECEETTEECCEECCSS
T ss_pred CCccccCcCCcCccEEEeccceEEEEEEEeeCCcCCC---CCcceeEEEEEEEEEcCCc--EeEEeeCCCccEEEeccCC
Confidence 578998765 46899999999999999998753110 0011234566665544432 2222211 221222
Q ss_pred CCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCCCccc
Q psy13339 198 GPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEE 277 (365)
Q Consensus 198 g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 277 (365)
...+..-.+.. ....++|+|..++-++. -| .||-|+|-........ .+.|+..-.-..++.-.
T Consensus 120 ~~~~v~~~l~~-pi~aRyvRi~p~~~~~~---~~-~R~ElyGc~~~~~~c~------------~plGm~sg~I~d~~itA 182 (325)
T 2qqj_A 120 ATEVVLNKLHA-PLLTRFVRIRPQTWHSG---IA-LRLELFGCRVTDAPCS------------NMLGMLSGLIADSQISA 182 (325)
T ss_dssp SSCCEEEEEEE-EEEEEEEEEEEEEEESS---CC-BEEEEEEECGGGSTTC------------EECSTTTSCSCGGGEEE
T ss_pred CCeeEEEecCC-ceEEEEEeecCcccccc---ce-eeeeeeeeeeccceec------------cccccccccCCCccccc
Confidence 22222222322 23468999999998873 56 4999999875421100 01121100000000000
Q ss_pred cccccccceeeeeccCCcCC--CCCCCeeeee-----CCeeEEEEEecceeEeeEEEEeecC
Q psy13339 278 EKSNRSVALTWVMFQSHRAG--KMRTNGMAFQ-----GAIGCLVLKLSHRIQVTRFSMEHIP 332 (365)
Q Consensus 278 ~~~~~~~~~~~~~~~~p~~~--~~pg~cw~f~-----g~~g~~~i~l~~~i~~~~~tleHi~ 332 (365)
+-+++ ....|..+ ...+..|+-. ...-.|.|.|-.+..|++|.++...
T Consensus 183 SS~~~-------~~~~p~~arL~~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~ 237 (325)
T 2qqj_A 183 SSTQE-------YLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGAR 237 (325)
T ss_dssp SCCCC--------CCCGGGGBTTTCSSCBCCSSSSCCTTTCCEEEEEEEEEEEEEEEEECBC
T ss_pred ccccC-------cccCcchhhhccCCCccccccccCCCccceeEeccCCceeEEEEEecCCC
Confidence 00110 00122212 1234567654 3456799999999999999998654
No 35
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=78.54 E-value=7 Score=32.94 Aligned_cols=104 Identities=13% Similarity=0.010 Sum_probs=63.1
Q ss_pred CCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE--------EEE
Q psy13339 124 LPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG--------EFM 193 (365)
Q Consensus 124 ~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg--------~f~ 193 (365)
..+..||.... .-.|.|.|.++..|+.|.++.-... +...-.+.|.|....|.. .+..+. .|.
T Consensus 44 ~~~~~W~~~~~~~~qwlqVDLg~~~~vt~v~tqg~~~~-----~~~~~v~~y~i~~S~Dg~--~W~~~~~~~~~~~~~F~ 116 (158)
T 3bn6_A 44 GKFNAWTAQTNSASEWLQIDLGSQKRVTGIITQGARDF-----GHIQYVAAYRVAYGDDGV--TWTEYKDPGASESKIFP 116 (158)
T ss_dssp SSSCSEECSSCCTTCCEEEEEEEEEEEEEEEEECEEET-----TEEEEEEEEEEEEESSSS--SCEECCCTTCSSCCCEE
T ss_pred CCCCcccCCCCCCCCEEEEeCCCceEEEEEEeeCCCCC-----CCCceEEEEEEEEECCCC--ceEEEEcCCCCceeeee
Confidence 35688998765 4589999999999999999854211 111235666666554432 122211 122
Q ss_pred EcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEee
Q psy13339 194 YDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHG 239 (365)
Q Consensus 194 Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG 239 (365)
=+.+....+...+.. ....++|+|..++-+|. -|+ ||-|+|
T Consensus 117 GN~d~~~~~~~~l~~-pi~ARyVRi~p~~~~~~---~~l-R~ElyG 157 (158)
T 3bn6_A 117 GNMDNNSHKKNIFET-PFQARFVRIQPVAWHNR---ITL-RVELLG 157 (158)
T ss_dssp CCSSSSCCEEEEEEE-EEEEEEEEEEEEEEESS---CEE-EEEEEE
T ss_pred ccCCCCeEEEEeCCC-CEEEEEEEEEEEEcCCe---eEE-EEEEEc
Confidence 122233333333322 13468999999998874 576 999988
No 36
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=72.86 E-value=40 Score=28.08 Aligned_cols=113 Identities=11% Similarity=-0.026 Sum_probs=69.3
Q ss_pred cCccccccccCC----CCCeeeccC-CceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCce
Q psy13339 113 SSPRKAIQPGLL----PGDCWAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPT 187 (365)
Q Consensus 113 ~~P~~aL~p~~~----pG~CW~f~G-s~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~ 187 (365)
..|..|++.+.. .|.|.-... ....+.|.|.+.-.|+.|.|.+-... -...-+.|+|..-.+. +. .
T Consensus 30 ~~a~~AvDG~~~t~w~~~sct~T~~~~~~Ww~VDLg~~~~V~~V~i~~r~d~------~~~r~~~~~I~vg~s~-d~--~ 100 (148)
T 2j22_A 30 GFSRLAVDGNKNGDYGHHSVTHTKEDSPSWWEIDLAQTEELEKLIIYNRTDA------EIQRLSNFDIIIYDSN-DY--E 100 (148)
T ss_dssp CCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEEEEEEEEEEEEEECCSS------CGGGSEEEEEEEECTT-SC--E
T ss_pred CccCccEeCCCCCcccccceeccCCCCCCEEEEECCCCEEeeEEEEEecCCC------cccccCCEEEEEEeCC-CC--C
Confidence 367778876543 356765443 45799999999999999999875211 1123456776533222 11 1
Q ss_pred eEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeee
Q psy13339 188 LLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN 240 (365)
Q Consensus 188 ~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~ 240 (365)
.-+. .++.......+|.++. ...++|+|++. |+..+.-|+.|.|||.
T Consensus 101 ~~~~-~~~~~~~~~~~~~~~~--~~gRYVrv~~~---g~~~~lsL~EveVyg~ 147 (148)
T 2j22_A 101 VFTQ-HIDSLESNNLSIDLKG--LKGKKVRISLR---SAGIPLSLAEVEVYTY 147 (148)
T ss_dssp EEEE-EEEECSSSEEEEEEEE--EEEEEEEEEES---STTCCCCEEEEEEEEC
T ss_pred cccc-eecCCCCCEEEEEeCC--eeEEEEEEEEE---CCCCceEEEEEEEEec
Confidence 2222 2222223345665533 34689999996 4446788999999995
No 37
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=68.06 E-value=33 Score=31.44 Aligned_cols=108 Identities=8% Similarity=-0.006 Sum_probs=67.8
Q ss_pred CCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeE---EEEEEcCCCC
Q psy13339 125 PGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLL---GEFMYDSEGP 199 (365)
Q Consensus 125 pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~L---g~f~Yd~~g~ 199 (365)
.+.+||.... .-.|.|.|.++..|+.|.++.-.. ...-.+.|.|.-..|.. .+... +-|.=+.++.
T Consensus 48 ~~~~W~a~~~d~~qwLqVDLg~~~~Vt~V~tQG~~~-------~~~~vt~Y~l~yS~Dg~--~W~~y~~~~vF~GN~d~~ 118 (257)
T 2vm9_A 48 GSESWSSSVLDKNQFIVAGSDSVKHFVAISTQGRGD-------HDQWVTSYKLRYTLDNV--NWVEYNNGEIINANKDRN 118 (257)
T ss_dssp CCSSEECSSCSTTCCEEEEEEEEEEEEEEEEECCSS-------SSCEEEEEEEEEESSSS--CEEEGGGGCCEECCSSSS
T ss_pred CCCeeeCCCCCCCcEEeecCCCcEEEEEEEEeCCcc-------CCceEEEEEEEEEcCCC--cEEEEcCCceecccCCCC
Confidence 3589998864 458999999999999999997641 12235566665444432 12111 1122222333
Q ss_pred ceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCC
Q psy13339 200 TLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPS 246 (365)
Q Consensus 200 ~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~ 246 (365)
......+.. ....++|+|..++-+|+ -|+ |+-|+|-+.++.+
T Consensus 119 t~v~~~l~~-pi~ARyVRi~p~~w~~~---i~l-R~El~Gc~~~~~~ 160 (257)
T 2vm9_A 119 SIVTINFNP-PIKARSIAIHPQTYNNH---ISL-RWELYALPVKSYS 160 (257)
T ss_dssp CCEEEEEEE-EEEEEEEEEEEEEEESS---CEE-EEEEEECCCCTTS
T ss_pred ceEEEeCCC-CceEEEEEeeeeeecCc---eEE-EEEeccCCccccc
Confidence 333333332 13468999999999885 676 9999999876643
No 38
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=67.82 E-value=24 Score=29.65 Aligned_cols=106 Identities=8% Similarity=-0.044 Sum_probs=62.7
Q ss_pred CCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE--------EEE
Q psy13339 124 LPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG--------EFM 193 (365)
Q Consensus 124 ~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg--------~f~ 193 (365)
..+.+||.... .-.|.|.|.++..|+.|.++..... +...-.+.|.|--..|.. .+..+. .|.
T Consensus 43 ~~~~~W~a~~~~~~qwLqVDLg~~~~Vt~v~tqG~~~~-----~~~~~v~~y~l~yS~Dg~--~W~~~~~~~~~~~~vF~ 115 (160)
T 1czt_A 43 GRVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSL-----SSEMYVKSYTIHYSEQGV--EWKPYRLKSSMVDKIFE 115 (160)
T ss_dssp SSSCSEECSSCSTTCCEEEEEEEEEEEEEEEEECEEET-----TEEEEEEEEEEEEESSSS--SCEECCCTTCSSCCCEE
T ss_pred CCCCcccCCCCCCCcEEEEeCCCcEEEEEEEEeCcCCC-----CcccEEEEEEEEEECCCC--cEEEEEcCCCccccccc
Confidence 34579998754 4589999999999999999864210 011234566665544432 122211 122
Q ss_pred EcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeee
Q psy13339 194 YDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNL 241 (365)
Q Consensus 194 Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~ 241 (365)
=+.+....+...+.. ....++|+|..++-+|. .| -||-|+|-.
T Consensus 116 GN~d~~t~v~~~l~~-pi~ARyvRi~p~~w~~~---~~-~R~ElyGc~ 158 (160)
T 1czt_A 116 GNTNTKGHVKNFFNP-PIISRFIRVIPKTWNQS---IT-LRLELFGCD 158 (160)
T ss_dssp CCSSSSCCEEEEEEE-EEEEEEEEEEEEEEESS---CE-EEEEEEEEE
T ss_pred CcCCCCceEEEecCC-CEEEEEEEEEEEEeCCc---eE-EEEEEEeEe
Confidence 122222333333322 13468999999998874 56 599999965
No 39
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=65.61 E-value=59 Score=27.20 Aligned_cols=116 Identities=9% Similarity=0.011 Sum_probs=69.8
Q ss_pred cCccccccccCC----CCCeeecc-CCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEE-EEecCCCCCc
Q psy13339 113 SSPRKAIQPGLL----PGDCWAFQ-GAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVW-GLREKYDENP 186 (365)
Q Consensus 113 ~~P~~aL~p~~~----pG~CW~f~-Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~-g~~~~~~~~~ 186 (365)
..|..|++.+.. .|.|--.. .....+.|.|.++..|+.|.|-+-.-. .....-+.|+|. |-.|. ..+
T Consensus 27 ~~a~~AvDG~~~t~w~~~sct~t~~~~~~W~~VDLg~~~~v~~V~i~nr~d~-----~~~~r~~~~~I~v~s~dg--~~w 99 (153)
T 4gwi_A 27 GAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLGKTENVGKVKLYNRGDG-----NVANRLSNFDVVLLNEAK--QEV 99 (153)
T ss_dssp CCGGGGGSSCCCCCGGGTCCCCCCSBTTCEEEEEEEEEEEEEEEEEEECCST-----TCGGGSCSEEEEEECTTS--CEE
T ss_pred CCcceeEcCCCCCcccccccccCCCCCCCEEEEECCCCEEEEEEEEEcccCC-----chhhcccceEEEEECCCC--Cee
Confidence 356677765442 34443222 235689999999999999999764211 112345778874 43222 112
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeC
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 242 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~ 242 (365)
... +.-+..+...+++.++. ...++|+|++..+- .+--|+.|.|||.+.
T Consensus 100 ~~~--~~~~~~~~~~~~i~~~~--~~gRYVrv~~~~~~---~~lsL~EveVyg~~~ 148 (153)
T 4gwi_A 100 ARQ--HFDSLNGKAELEVFFTA--KDARYVKVELKTKN---TPLSLAEVEVFRSAT 148 (153)
T ss_dssp EEE--EESCCTTCSEEEEEEEE--EEEEEEEEEECSSS---BCCCEEEEEEEEBC-
T ss_pred eee--EEecCCCCCEEEEEeCC--ceEEEEEEEEEcCC---CceEEEEEEEECccc
Confidence 221 11122234566666643 45789999998764 368899999999864
No 40
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=64.96 E-value=48 Score=32.49 Aligned_cols=178 Identities=13% Similarity=0.022 Sum_probs=90.7
Q ss_pred CCCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEEEc
Q psy13339 124 LPGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFMYD 195 (365)
Q Consensus 124 ~pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~Yd 195 (365)
.++.+|+.... .-.|.|.|.++..|+.|.++.-..... ....--+.|.|-...|.. .+..+- -|.=+
T Consensus 174 ~~~~~W~~~~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~~---~~~~~v~~y~l~~S~dg~--~W~~~~~~~~~~~F~GN 248 (450)
T 2qqm_A 174 YPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKET---KKKYYVKTYKIDVSSNGE--DWITIKEGNKPVLFQGN 248 (450)
T ss_dssp CSSCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTT---CCEEEEEEEEEEEESSSS--SEEECBSSSSBCCEECC
T ss_pred cCCCCccCCCCCCCceEEEcccceEEEEEEeccCCCCCCC---CcceeEEEEEEEEeCCCC--ceeEEeCCCeeeEeecc
Confidence 35678997654 357999999999999999997532100 011123555555443321 122110 01111
Q ss_pred CCCCc--eeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCC
Q psy13339 196 SEGPT--LQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPS 273 (365)
Q Consensus 196 ~~g~~--~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 273 (365)
.+... ...|. . ....+.|+|..++=++. -| .|+-|+|-......- ..+.|+..-.-..+
T Consensus 249 ~d~~~~v~~~l~--~-pi~aRyvRi~p~~w~~~---~~-lr~E~~Gc~~~~~~c------------~~plgme~g~i~d~ 309 (450)
T 2qqm_A 249 TNPTDVVVAVFP--K-PLITRFVRIKPATWETG---IS-MRFEVYGCKITDYPC------------SGMLGMVSGLISDS 309 (450)
T ss_dssp SSSSCCEEEEEE--E-EEEEEEEEEEEEEEESS---CC-BEEEEEEECGGGSTT------------CEECSTTTSCSCGG
T ss_pred cCCCcEEEEecC--C-ceEEEEEEEEEeeccCc---ee-EEEEEeccccccccc------------ccccccCCCCcccc
Confidence 22222 33332 2 12468899998874443 45 589999986432110 01112110000011
Q ss_pred CccccccccccceeeeeccCCcCC--CCCCCeeee-----eCCeeEEEEEecceeEeeEEEEeecC
Q psy13339 274 GTEEEKSNRSVALTWVMFQSHRAG--KMRTNGMAF-----QGAIGCLVLKLSHRIQVTRFSMEHIP 332 (365)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~p~~~--~~pg~cw~f-----~g~~g~~~i~l~~~i~~~~~tleHi~ 332 (365)
+.-.+-+++- ...|..+ ...+..|+- ....-.|.|.|-.+..|++|.++.-.
T Consensus 310 ~itASS~~~~-------~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg~~~~vt~v~tqg~~ 368 (450)
T 2qqm_A 310 QITSSNQGDR-------NWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGK 368 (450)
T ss_dssp GEEETTTTST-------TCCGGGGBTTTCSSCEEECCCSSCCCSCCEEEEEEEEEEEEEEEEECCS
T ss_pred cccccccccc-------ccCchhhhccccCCcccccccccCCcCceEEEeCCCcEEEEEEEecCcc
Confidence 1111111110 0112111 223567873 23456899999999999999998643
No 41
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=64.79 E-value=1.3e+02 Score=30.89 Aligned_cols=176 Identities=10% Similarity=0.058 Sum_probs=91.8
Q ss_pred CCeeeccCC------ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEE
Q psy13339 126 GDCWAFQGA------IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFM 193 (365)
Q Consensus 126 G~CW~f~Gs------~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~ 193 (365)
+.+||.... .-.|.|.|.++..|+.|.++=.... ....--+.|.|....|.. .+..+. ..+
T Consensus 368 ~~~W~~~~~~~~~~~~qwlqVDLg~~~~vt~v~tqg~~~~-----~~~~~v~~y~i~yS~Dg~--~W~~~~~~~~~~~~~ 440 (647)
T 1sdd_B 368 YNAWIAEKLSTEFNPEPWIQVDMQKEVLLTGIQTQGAKHY-----LKPYYTTEFCVAYSLDRK--NWRIFKGNSTRNVMY 440 (647)
T ss_dssp SCSEECSCCCCSSCCCSCEEEEEEEEEEEEEEEEECEESS-----SSEEEEEEEEEEEESSSS--SCEECCSSCSSSSCC
T ss_pred cccccCCCCcccccccceEEeccCCeEEEEEEEEcCCCCC-----CCccEEEEEEEEEEcCCC--ceEEecccCCCcceE
Confidence 469998865 3589999999999999999843210 011234556665544432 122111 011
Q ss_pred EcC--CCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccC
Q psy13339 194 YDS--EGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYN 271 (365)
Q Consensus 194 Yd~--~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (365)
|.. +...+..-.+.. ....++|+|..++=+|. +..||-|+|-....-. .+.|+..-.-.
T Consensus 441 f~gn~d~~~~v~~~l~~-pi~aRyVRi~p~~~~~~----~~lr~ElyGc~~~~c~--------------~plGmesg~I~ 501 (647)
T 1sdd_B 441 FGGNSDASTIKENQIDP-PVVARYIRISPTGSYNK----PALRLELQGCEVNGCS--------------TPLGMESGKIE 501 (647)
T ss_dssp EECCSSSSSCEEEEEEE-EEEEEEEEEEEEEEESS----CEEEEEEEEECTTSCC--------------SBCSTTTSSSC
T ss_pred ecCCCCCCceeEEcCCC-CEEEEEEEEEEEeecCc----ceeeeccccccccccc--------------cccCccCCccC
Confidence 221 222223322322 23468899999986663 3568999998743211 12222110000
Q ss_pred CCCcccccccc-ccceeeeeccCCcCC-C---CCCCeeeeeCC--eeEEEEEecceeEeeEEEEeec
Q psy13339 272 PSGTEEEKSNR-SVALTWVMFQSHRAG-K---MRTNGMAFQGA--IGCLVLKLSHRIQVTRFSMEHI 331 (365)
Q Consensus 272 ~s~~~~~~~~~-~~~~~~~~~~~p~~~-~---~pg~cw~f~g~--~g~~~i~l~~~i~~~~~tleHi 331 (365)
.++.-.+.+.. +++- ...|..+ + -.+.+|+-... .-.|.|.|-.+..|++|.++.-
T Consensus 502 d~~itASS~~~~~~~~----~~~p~~arL~~~g~~~~W~a~~~~~~qwLqVDLg~~~~vt~v~tqg~ 564 (647)
T 1sdd_B 502 NKQITASSFKKSWWGN----YWEPFLARLNAQGRVNAWQAKANNNNQWLQIDLLKIKKITAIVTQGC 564 (647)
T ss_dssp STTEEESCCCEETTTE----ECCGGGCBSSCCSSSCSEECSSCSSCCCEEEEEEEEEEEEEEEEECE
T ss_pred CCceeecccccccccc----ccCccccccccCCCcccccCCCCCCCcEEEEeCCCceEEEEEEeecC
Confidence 11111111110 0000 0122222 1 13468975543 5789999999999999988764
No 42
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=55.43 E-value=22 Score=30.25 Aligned_cols=47 Identities=6% Similarity=0.045 Sum_probs=36.7
Q ss_pred CCCCCeeeeeC-CeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCCceeEEEEeecC
Q psy13339 298 KMRTNGMAFQG-AIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHS 356 (365)
Q Consensus 298 ~~pg~cw~f~g-~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g~~~~ 356 (365)
..|..||.=.| +.-.|+|.|..++.++.|.|. +.+ +|+|+|.+..++
T Consensus 43 gn~~T~W~t~g~~Pq~i~Idf~k~~~is~~~i~-------~~~-----vk~~~ie~s~d~ 90 (153)
T 1tvg_A 43 GNPETFWTTTGMFPQEFIICFHKHVRIERLVIQ-------SYF-----VQTLKIEKSTSK 90 (153)
T ss_dssp SCTTCCEECCSCSSEEEEEEEEEEEEEEEEEEE-------EES-----EEEEEEEEECSS
T ss_pred CCCCceEECCCCCCcEEEEECCCceEEEEEEEE-------ecC-----CEEEEEEEECCC
Confidence 46789997664 477899999999999999998 111 678888776654
No 43
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=53.43 E-value=2.8 Score=47.45 Aligned_cols=118 Identities=9% Similarity=0.107 Sum_probs=0.0
Q ss_pred CccccccccCCCCCeeecc--CC---c--eEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCc
Q psy13339 114 SPRKAIQPGLLPGDCWAFQ--GA---I--GCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENP 186 (365)
Q Consensus 114 ~P~~aL~p~~~pG~CW~f~--Gs---~--G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~ 186 (365)
+|..|++.+ ++..|... +. . -.|.|.|.++..|+.|.+..-... +.....+++|+|+...++.. .+
T Consensus 1245 ~A~nAIDGD--~~T~WHSaWs~ss~~~PgqWLqVDLGe~~tIsgf~YqpRqdg----~~~NG~VksYkIeVS~dDG~-nW 1317 (1376)
T 2zxq_A 1245 PADLAQDGN--DSTHWHTSWSENAVGNGTAWYQFNLNEPTTINGLRYLPRSGG----MNANGKIKGYKITLTLADGT-TK 1317 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHcCcCC--CCCeEEecccccCCCCCceEEEEEcCCcEEEEEEEEecCccC----CCCCCceEEEEEEEECCCCC-eE
Confidence 466677654 34555433 11 1 369999999999999998642110 01234689999998773222 35
Q ss_pred eeEEEEEEcCCCCceeEEEecCCCcceeEEEEEEeecCCCCC-----CceEEEEEEeee
Q psy13339 187 TLLGEFMYDSEGPTLQYFEAKMVADTFDMVELKILSNHGNIE-----YTCLYRFRVHGN 240 (365)
Q Consensus 187 ~~Lg~f~Yd~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~-----yTClYR~RVhG~ 240 (365)
..+.+.++..+ ...|.+.+.. ....++|+|.+++-+|+.. |.+++-|+|+|.
T Consensus 1318 ttVa~GTFsgn-~t~kti~Fd~-PVkARYVRf~ats~~gg~g~~~Nk~aSIAEf~Vyg~ 1374 (1376)
T 2zxq_A 1318 DVVTDAEFSTT-TMWQKASFDA-VENVTAVRLTVLSSAGQSDSQANKFASAAELRLTTD 1374 (1376)
T ss_dssp -----------------------------------------------------------
T ss_pred EEEEeeEEcCC-CceEEEEeCC-CceEEEEEEEEEEccCCCCccccceEEEEEEEEecc
Confidence 56655455433 3456665554 2346899999999887633 899999999985
No 44
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=53.00 E-value=47 Score=26.42 Aligned_cols=50 Identities=14% Similarity=0.201 Sum_probs=39.9
Q ss_pred CCCCeeeeeCCeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCCceeEEEEeecCC
Q psy13339 299 MRTNGMAFQGAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQ 357 (365)
Q Consensus 299 ~pg~cw~f~g~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g~~~~~ 357 (365)
.++.+|.-.+. ..|.|.|..+..+++|.|..-.. ...|++|.|.+..++.
T Consensus 33 ~~~t~W~~~~~-~~l~vDLg~~~~v~~v~i~~~~~--------~~~~~~~~i~~S~Dg~ 82 (145)
T 2jda_A 33 DVKTRWAASGE-SWVQLELDKEQSIENILIVPFKP--------TERKLKFSIFYSNDGK 82 (145)
T ss_dssp CTTCCEEEESS-EEEEEEEEEEEEEEEEEEEESST--------TTCCEEEEEEEESSSS
T ss_pred CCCCeECCCCC-eeEEEECCCceEEEEEEEEeccC--------CCceEEEEEEEeCCCC
Confidence 45678998877 89999999999999999987421 2478999999876653
No 45
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=49.95 E-value=1.3e+02 Score=30.64 Aligned_cols=107 Identities=18% Similarity=0.084 Sum_probs=58.4
Q ss_pred CCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEE--E
Q psy13339 125 PGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFM--Y 194 (365)
Q Consensus 125 pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~--Y 194 (365)
++.+||.+.. .-.|.|.|.++..|+.|..+--...-. ....=-+.|.|.-..|.. .+...- -|. .
T Consensus 293 ~~~aW~~~~~~~~qwlqVDl~~~~~it~v~tQG~~~~~~---~~~~~v~~y~v~~s~dg~--~w~~y~~~~~~~vf~GN~ 367 (577)
T 4gz9_A 293 PENGWTPGEDSYKEWIQVDLGLLRFVTAVGTQGAISKET---KKKYYVKTYRVDISSNGE--DWISLKEGNKAIIFQGNT 367 (577)
T ss_dssp SSCCBCCSSCCTTCCEEEEEEEEEEEEEEEEECEECTTT---CCEEEEEEEEEEEESSSS--SCEECBSSSSBCCEECCS
T ss_pred CCCcccCCCCCCCeEEEEcCCCEEEEEEEEccCCCCCCC---CcceeEEEEEEEEEcCCC--cEEEEecCCCceEEeCCC
Confidence 5678997753 468999999999999999875311100 000012344443332221 111110 011 1
Q ss_pred cCCCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCC
Q psy13339 195 DSEGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 243 (365)
Q Consensus 195 d~~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~ 243 (365)
|.+..-.+.|.-+ ...++|+|.-++-++. -|+ ||-|+|=...
T Consensus 368 d~~~~v~~~l~~p---i~aryvRi~p~~~~~~---~~m-R~El~Gc~~~ 409 (577)
T 4gz9_A 368 NPTDVVLGVFSKP---LITRFVRIKPVSWETG---ISM-RFEVYGCKIT 409 (577)
T ss_dssp SSSSCEEEEEEEE---EEEEEEEEEEEEEESS---CCB-EEEEEEECGG
T ss_pred CCCcEeEeecCCC---cEEEEEEEEeEecccc---EEE-EEEecccccc
Confidence 1111223334222 2358899999998874 564 9999997543
No 46
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=45.40 E-value=1.5e+02 Score=25.63 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=63.6
Q ss_pred Ceeec-----c-CCceEEEEEcCceeEEEEE-EEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEE--cCC
Q psy13339 127 DCWAF-----Q-GAIGCLVLKLSHRIQVTRF-SMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMY--DSE 197 (365)
Q Consensus 127 ~CW~f-----~-Gs~G~L~I~Ls~~I~~~~v-sieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Y--d~~ 197 (365)
.+||. . ...-.|.|.|.++..|+.| ..+--... ....-.+.|.|....|.. .+..+.+... +.+
T Consensus 51 ~aW~a~~~~~~~~~~qwLQVDLg~~~~VtgV~~tQG~~~~-----~~~~~vt~Y~l~yS~DG~--~W~~~~~~~~~GN~d 123 (192)
T 2w1s_A 51 GVWYKTLNGDTSLAGEFIGLDLGKEIKLDGIRFVIGKNGG-----GSSDKWNKFKLEYSLDNE--SWTTIKEYDKTGAPA 123 (192)
T ss_dssp CEEEECHHHHCBCTTCEEEEEEEEEEEEEEEEEEECCSST-----TTTCCCSEEEEEEESSSS--SCEEEEEEECTTCCS
T ss_pred CEEeCCcccccCCCCceEEEECCCeEEEEEEEEEcCCCCC-----CCCCeEEEEEEEEEcCCC--CeEEEecCCccCCcC
Confidence 49998 2 2345899999999999999 55432211 112456789887766553 4666665544 112
Q ss_pred CCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEE
Q psy13339 198 GPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRV 237 (365)
Q Consensus 198 g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RV 237 (365)
....+...+.. ....++|+|..+++ ++ .+.-+.-|||
T Consensus 124 ~~t~v~~~f~~-pi~ARYVRi~p~~~-~~-~w~~~~elRV 160 (192)
T 2w1s_A 124 GKDVIEESFET-PISAKYIRLTNMEN-IN-KWLTFSEFAI 160 (192)
T ss_dssp SCEEEEEEEEE-EEEEEEEEEEECSC-BS-CCEEEEEEEE
T ss_pred CCcEEEEecCC-CceEEEEEEEEeeC-CC-ccceEEEEEE
Confidence 22333333332 23479999999996 33 4667888999
No 47
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=44.54 E-value=1.4e+02 Score=29.21 Aligned_cols=179 Identities=11% Similarity=0.043 Sum_probs=90.5
Q ss_pred CCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEE----EEEc--C
Q psy13339 125 PGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGE----FMYD--S 196 (365)
Q Consensus 125 pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~----f~Yd--~ 196 (365)
++..||.... .-.|.|.|.++..|++|.++....... ....--+.|.|-.-.|.. .+..+-+ -.|. .
T Consensus 173 ~~~~W~~~~~~~~~wlqVDLg~~~~vt~v~tqG~~~~~~---~~~~~v~~y~l~~S~dg~--~W~~~~~~~~~~~F~Gn~ 247 (460)
T 2qqo_A 173 DDNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISRET---QNGYYVKSYKLEVSTNGE--DWMVYRHGKNHKVFQANN 247 (460)
T ss_dssp SSCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTT---CCEEEEEEEEEEEESSSS--SCEECEETTEECCEECCS
T ss_pred CCceeeCCCCCcceeEeccCCceEEEEEEEeecCCCCCC---CccceEEEEEEEEEcCCC--CeeEecCCCccEEEeccc
Confidence 3568987753 457999999999999999986531100 011123455554443321 2222111 1122 2
Q ss_pred CCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCCCcc
Q psy13339 197 EGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTE 276 (365)
Q Consensus 197 ~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 276 (365)
+...+..-.+.. ....+.|+|..++=++ .-|+ |+-|+|-......- ..+.|+..-.-..++.-
T Consensus 248 d~~~~v~~~l~~-pi~aRyvRi~p~~~~~---~~~l-r~E~~Gc~~~~~~c------------~~~lGm~sg~i~d~~it 310 (460)
T 2qqo_A 248 DATEVVLNKLHA-PLLTRFVRIRPQTWHS---GIAL-RLELFGCRVTDAPC------------SNMLGMLSGLIADSQIS 310 (460)
T ss_dssp SSSSCEEEEEEE-EEEEEEEEEEEEEEES---SCCB-EEEEEEECGGGSTT------------CEECSTTTSCSCGGGEE
T ss_pred CCCceEEEeCCC-CeeeeEEEEEeeeccC---cceE-EEeeeecccccccc------------cceeccccCCCCccccc
Confidence 222222222222 1235789998888655 3676 99999986543110 01122211000001111
Q ss_pred ccccccccceeeeeccCCcCC--CCCCCeeeee-----CCeeEEEEEecceeEeeEEEEeecC
Q psy13339 277 EEKSNRSVALTWVMFQSHRAG--KMRTNGMAFQ-----GAIGCLVLKLSHRIQVTRFSMEHIP 332 (365)
Q Consensus 277 ~~~~~~~~~~~~~~~~~p~~~--~~pg~cw~f~-----g~~g~~~i~l~~~i~~~~~tleHi~ 332 (365)
.+-+++ ....|..+ ...+..|+-. .....|.|.|-.+..|++|.++.-.
T Consensus 311 ASS~~~-------~~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~ 366 (460)
T 2qqo_A 311 ASSTQE-------YLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGAR 366 (460)
T ss_dssp ESCCCS-------SSCCGGGGBTTTCSSCBCCSSSSCCTTTCCEEEEEEEEEEEEEEEEECCC
T ss_pred cccCCC-------cccCcchhhhccCCCCcccccccCCCccceEEEcCCCceEEEEEEecCCC
Confidence 111111 00122212 1234568754 3456799999999999999988644
No 48
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=35.33 E-value=1.6e+02 Score=24.46 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=60.8
Q ss_pred CCCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEEEcC
Q psy13339 125 PGDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFMYDS 196 (365)
Q Consensus 125 pG~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~Yd~ 196 (365)
.+.+||.... .-.|.|.|.++..|++|.++.-... ....--+.|.|.-..|. ..+..+- .|.=+.
T Consensus 46 ~~~aW~a~~~d~~qwLqVDLg~~~~VtgV~tqG~~~~-----~~~~~v~~y~l~yS~Dg--~~W~~~~~~~~~~vF~GN~ 118 (159)
T 3hny_M 46 RSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSL-----LTSMYVKEFLISSSQDG--HQWTLFFQNGKVKVFQGNQ 118 (159)
T ss_dssp SSCSBCCSSCSTTCCEEEEEEEEEEEEEEEEECEEET-----TEEEEEEEEEEEEESSS--SSCEECEETTEECCEECCS
T ss_pred CCCccCCCCCCCCCeEEcccCCcEEEEEEEeecCCCC-----CccceEEEEEEEEEECC--CcEEEEecCCceEeeeccC
Confidence 4578998765 4589999999999999999854211 00112345555443332 1233221 133233
Q ss_pred CCCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeee
Q psy13339 197 EGPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGN 240 (365)
Q Consensus 197 ~g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~ 240 (365)
+........+.. ....++|+|..++=+|+ -| -|+-|+|=
T Consensus 119 d~~t~v~~~l~~-pi~ARyvRi~P~~w~~~---i~-lR~El~GC 157 (159)
T 3hny_M 119 DSFTPVVNSLDP-PLLTRYLRIHPQSWVHQ---IA-LRMEVLGC 157 (159)
T ss_dssp SSSSCEEEEEEE-EEEEEEEEEEEEEEESS---CC-BEEEEEEE
T ss_pred CCCcEEEEECCC-CcEEEEEEEEEEEeCCc---cE-EEEEEEcc
Confidence 333333333333 23468999999997763 34 57888884
No 49
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=33.79 E-value=2.5e+02 Score=28.25 Aligned_cols=178 Identities=11% Similarity=0.035 Sum_probs=90.4
Q ss_pred CCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEE----EEEc--CC
Q psy13339 126 GDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGE----FMYD--SE 197 (365)
Q Consensus 126 G~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~----f~Yd--~~ 197 (365)
+..||.... .-.|.|.|.++..|++|.++--...- ...+.--+.|.|....|.. .+..+-+ -.|. .+
T Consensus 293 ~~~W~~~~~~~~qwlqVDLg~~~~vt~v~tqG~~~~~---~~~~~~v~~y~l~~S~dg~--~W~~~~~~~~~~~f~GN~d 367 (579)
T 2qqk_A 293 DNGWTPNLDSNKEYLQVDLRFLTMLTAIATQGAISRE---TQNGYYVKSYKLEVSTNGE--DWMVYRHGKNHKVFQANND 367 (579)
T ss_dssp SCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTT---TCCEEEEEEEEEEEESSSS--SCEECEETTEECCEECCSS
T ss_pred CceecCCCCCCCceEEeecceeEEEEEEEccCCccCC---CCcccceEEEEEEEECCCC--ceeeeecCCcceEEcCCCC
Confidence 467987754 45799999999999999998642110 0011123455554444321 1222111 1122 22
Q ss_pred CCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCCCccc
Q psy13339 198 GPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEE 277 (365)
Q Consensus 198 g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 277 (365)
...+..-.+.. ....+.|+|..++=++ +-|+ ||-|+|-........ .+.|+..-.-..++.-.
T Consensus 368 ~~~~v~~~l~~-pi~aRyvRi~p~~~~~---~~~l-r~E~~Gc~~~~~~c~------------~~lGm~~g~i~d~~itA 430 (579)
T 2qqk_A 368 ATEVVLNKLHA-PLLTRFVRIRPQTWHS---GIAL-RLELFGCRVTDAPCS------------NMLGMLSGLIADSQISA 430 (579)
T ss_dssp SSCCEEEEEEE-EEEEEEEEEEEEEEES---SCCB-EEEEEEECGGGSSSC------------EECSTTTSSSCGGGEEE
T ss_pred CCcEEEEeCCC-CeeeEEEEEEEEEcCC---ccEE-eeeeeccccccccce------------eccccccCcccccceec
Confidence 22222222222 1236888888888665 3666 999999875432111 11222110000011111
Q ss_pred cccccccceeeeeccCCcCC--CCCCCeeeee-----CCeeEEEEEecceeEeeEEEEeecC
Q psy13339 278 EKSNRSVALTWVMFQSHRAG--KMRTNGMAFQ-----GAIGCLVLKLSHRIQVTRFSMEHIP 332 (365)
Q Consensus 278 ~~~~~~~~~~~~~~~~p~~~--~~pg~cw~f~-----g~~g~~~i~l~~~i~~~~~tleHi~ 332 (365)
+-+++ ....|..+ ...+..|+-. ...-.|.|.|-.+..|++|-++.-.
T Consensus 431 SS~~~-------~~~~p~~arl~~~~~~W~~~~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~ 485 (579)
T 2qqk_A 431 SSTQE-------YLWSPSAARLVSSRSGWFPRIPQAQPGEEWLQVDLGTPKTVKGVIIQGAR 485 (579)
T ss_dssp SCCCC---------CCGGGGBTTTCSSCBCCSSTTCCTTTCCEEEEEEEEEEEEEEEEECBC
T ss_pred ccCCC-------cccCchhheecccCcCCcccccccCCccceEEEecCCceEEEEEEeCCCC
Confidence 11111 00122211 2234568754 2456899999999999999998644
No 50
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=32.54 E-value=2.6e+02 Score=24.75 Aligned_cols=110 Identities=13% Similarity=-0.000 Sum_probs=63.7
Q ss_pred CCeeeccCC--ceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEEEcCC
Q psy13339 126 GDCWAFQGA--IGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFMYDSE 197 (365)
Q Consensus 126 G~CW~f~Gs--~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~Yd~~ 197 (365)
+..|+...+ .-.|.|.|.++..|++|.++.....-. ....--+.|.|.-..|. ..+..+- .|.=+.+
T Consensus 43 ~~aW~a~~~d~~qWLQVDLg~~~~VtgV~tQG~~~~~~---~~~~~VtsY~l~yS~DG--~~W~~y~~~~~~kvF~GN~D 117 (218)
T 4deq_A 43 ENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKET---KKKYYVKTYKIDVSSNG--EDWITIKEGNKPVLFQGNTN 117 (218)
T ss_dssp SCCBCCSSCSTTCCEEEEEEEEEEEEEEEEECEECTTT---CCEEEEEEEEEEEESSS--SSCEECEETTEECCEECCSS
T ss_pred CCeECCCCCCCCCeEEEeCCCcEEEEEEEEEeccCCCC---CccceEEEEEEEEEeCC--CceEEeecceeeecccCcCC
Confidence 568998765 468999999999999999886421100 01112345555433332 1233221 1222233
Q ss_pred CCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCC
Q psy13339 198 GPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSP 245 (365)
Q Consensus 198 g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~ 245 (365)
........+.. .....+|+|..++=+|+ -| -||=|+|-...+.
T Consensus 118 ~~t~v~~~l~~-Pi~ARyVRi~P~~w~~~---i~-lRvElyGC~~~~~ 160 (218)
T 4deq_A 118 PTDVVVAVFPK-PLITRFVRIKPATWETG---IS-MRFEVYGCKITDY 160 (218)
T ss_dssp SSSCEEEEEEE-EEEEEEEEEEEEEEESS---CC-BEEEEEEECTTTC
T ss_pred CCceEEEeCCC-CEEEEEEEEEeeeecCC---cE-EEEEEEeeccccc
Confidence 33333332332 13468999999987763 45 5999999876553
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=30.74 E-value=65 Score=34.36 Aligned_cols=175 Identities=10% Similarity=0.013 Sum_probs=90.6
Q ss_pred CCeeeccCCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEE------EEEEcC--C
Q psy13339 126 GDCWAFQGAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLG------EFMYDS--E 197 (365)
Q Consensus 126 G~CW~f~Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg------~f~Yd~--~ 197 (365)
+.+||.....-.|.|.|.++..|+.|.++=-... ..+.=-+.|.|....|.. .+..+- ...|.. +
T Consensus 497 ~~aW~~~~~~qwLQVDLg~~~~Vt~V~tQG~~~~-----~~~~~v~sY~I~yS~DG~--~W~~y~~~~~g~~~vF~GN~D 569 (770)
T 2r7e_B 497 INAWSTKEPFSWIKVDLLAPMIIHGIKTQGARQK-----FSSLYISQFIIMYSLDGK--KWQTYRGNSTGTLMVFFGNVD 569 (770)
T ss_dssp CSSEECCSSCCCEEEEEEEEEEECBCCCCCEECS-----SSEECCSEEEEEEESSSS--SCBCCCCSSSSSSCCCCCCSS
T ss_pred ccccccCCCCceEEecCCceEEEEEEEEcccCcC-----CcccceEEEEEEEecCCC--ccEEeecccccceeeecCCCC
Confidence 4799987666789999999999988877532110 011234677776655542 122110 011111 1
Q ss_pred CCceeEEEecCCCcceeEEEEEEeecCCCCCCceEEEEEEeeeeCCCCCcccccccccccccccccceeeeccCCCCccc
Q psy13339 198 GPTLQYFEAKMVADTFDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVHTYNRFSSANHNTLHHMTSSKYNPSGTEE 277 (365)
Q Consensus 198 g~~~Q~F~v~~~~~~~~~V~lri~SN~G~~~yTClYR~RVhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 277 (365)
...+..-.+.. ....++|+|..++-+|. . ..||-|+|-...+-. .+.|+..-.-..++.-.
T Consensus 570 ~~tvv~~~l~~-pi~ARyVRi~p~~~~~~---~-~mRvElyGc~~~~c~--------------~PLGmesg~I~d~qitA 630 (770)
T 2r7e_B 570 SSGIKHNIFNP-PIIARYIRLHPTHYSIR---S-TLRMELMGCDLNSCS--------------MPLGMESKAISDAQITA 630 (770)
T ss_dssp TTCCCCCCCSS-CEEEEEEEEEEEECSSS---C-EECCCCBCCTTTTCC--------------CCCSTTSSCSCTTSCCB
T ss_pred CCceeEEeccC-ceeEeEEEEeccccccc---c-eeeeecccccccccc--------------cCcccccccccccceEE
Confidence 11122222222 23468999999998885 3 458999997643211 11222100000111111
Q ss_pred cccccccceeeeeccCCcCC-C---CCCCeeeeeCC--eeEEEEEecceeEeeEEEEee
Q psy13339 278 EKSNRSVALTWVMFQSHRAG-K---MRTNGMAFQGA--IGCLVLKLSHRIQVTRFSMEH 330 (365)
Q Consensus 278 ~~~~~~~~~~~~~~~~p~~~-~---~pg~cw~f~g~--~g~~~i~l~~~i~~~~~tleH 330 (365)
+.+++-. +....|..+ + -.+.+|+-... .-.|.|.|-.+..|++|.++-
T Consensus 631 SS~~~~~----~~~~~P~~ARL~~~~~~~aW~a~~~d~~qwLQVDLg~~~~VtgV~tQG 685 (770)
T 2r7e_B 631 SSYFTNM----FATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQG 685 (770)
T ss_dssp SCCCBCS----SCBCCGGGCBTTCCSTTCSBCCSSCCSSCCEEECCSSCCCBCCEEECC
T ss_pred ccccCCC----cccccccceeecCCCCCceEECCCCCCCceEEEccccceEEEEEEEeC
Confidence 1111100 001122222 1 24678876543 457999999999999988764
No 52
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=27.28 E-value=3.3e+02 Score=26.98 Aligned_cols=88 Identities=11% Similarity=0.052 Sum_probs=61.9
Q ss_pred CCceEEEEEcCceeEEEEEEEEecCCCCCCCCCCCCCCcEEEEEEEecCCCCCceeEEEEEEcCCCCceeEEEecCCCcc
Q psy13339 133 GAIGCLVLKLSHRIQVTRFSMEHIPKALTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADT 212 (365)
Q Consensus 133 Gs~G~L~I~Ls~~I~~~~vsieHi~~~~s~~~~~~SAPr~f~V~g~~~~~~~~~~~Lg~f~Yd~~g~~~Q~F~v~~~~~~ 212 (365)
|..+.|.|.|.++..++.|.|+=-- ...---+.|.|.+..+. .+..|.+.+ .+.-..+-.|+- ..
T Consensus 353 ~~~~~~~i~l~~~~~fn~v~l~E~I-------~~GQRV~~f~ve~~~~g---~W~~v~~Gt-TIG~kRi~rf~~----V~ 417 (443)
T 3gza_A 353 GQKKSLTLKLGKEQSVNYCIIQENI-------KNGERIRQYQIEAKVNG---KWQTVCKGE-SVGHKRIEKFEP----VE 417 (443)
T ss_dssp ESSSEEEEEEEEEEEEEEEEEEECG-------GGCCCEEEEEEEEEETT---EEEEEEEES-CCTTCEEEEEEE----EE
T ss_pred CCCceEEEEcCCCceEeEEEEEecC-------CCCCcccEEEEEEEeCC---eEEEEEeee-eecceEEEecCC----ee
Confidence 4567899999999999999986431 11245788888877643 366776553 222245666642 34
Q ss_pred eeEEEEEEeecCCCCCCceEEEEEEe
Q psy13339 213 FDMVELKILSNHGNIEYTCLYRFRVH 238 (365)
Q Consensus 213 ~~~V~lri~SN~G~~~yTClYR~RVh 238 (365)
.++|+|+|++--|. -||..|.||
T Consensus 418 a~~lRl~I~~sr~~---p~I~~~gvy 440 (443)
T 3gza_A 418 ATALRLTVSESIAL---PDIINFSAY 440 (443)
T ss_dssp EEEEEEEEEEESSC---CCEEEEEEE
T ss_pred eeEEEEEEEecCCC---cEEEEEEEE
Confidence 78999999999886 589999887
No 53
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=26.57 E-value=1.9e+02 Score=24.56 Aligned_cols=57 Identities=11% Similarity=-0.015 Sum_probs=39.1
Q ss_pred CCCCeeee--e---CCeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCCceeEEEEeecCC
Q psy13339 299 MRTNGMAF--Q---GAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQ 357 (365)
Q Consensus 299 ~pg~cw~f--~---g~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g~~~~~ 357 (365)
.++.+|.- . ...=.|+|.|-.+..+++|.+-.-...-... -...||+|+|||-.++.
T Consensus 48 n~~T~Wht~w~~~~~~P~~itIDLg~~~~v~~~~~~~r~~~~~~~--~~g~ik~~~I~~S~Dg~ 109 (172)
T 3hnm_A 48 NPGTQWLCRWDVKEPLPYYFVFDMGKEYTLFRFGFANPVAPAAHV--WAGTSKAGYVEASIDNE 109 (172)
T ss_dssp CTTSCEECCCSSCCCSCEEEEEEEEEEEEEEEEEEECCCSSCTTS--TTCCEEEEEEEEESSSS
T ss_pred CCCCeEEecCCCCCCCCEEEEEECCCceEEeEEEEEecCCCCccc--CCCCeEEEEEEEEeCCC
Confidence 44566644 2 2345799999999999999987654421000 14689999999977653
No 54
>2ad6_B Methanol dehydrogenase subunit 2; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: a.137.2.1 PDB: 1g72_B* 2ad7_B* 2ad8_B* 4aah_B*
Probab=26.07 E-value=16 Score=26.90 Aligned_cols=9 Identities=22% Similarity=-0.111 Sum_probs=7.3
Q ss_pred CCCCCeeee
Q psy13339 298 KMRTNGMAF 306 (365)
Q Consensus 298 ~~pg~cw~f 306 (365)
..||+||-=
T Consensus 7 kapG~CWEp 15 (69)
T 2ad6_B 7 KEPGNCWEN 15 (69)
T ss_dssp SBTTBCCCC
T ss_pred CCCCCccCC
Confidence 579999963
No 55
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=25.84 E-value=2.3e+02 Score=22.96 Aligned_cols=53 Identities=9% Similarity=0.035 Sum_probs=38.1
Q ss_pred CCCCCeeeeeC------CeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCCceeEEEEeecC
Q psy13339 298 KMRTNGMAFQG------AIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHS 356 (365)
Q Consensus 298 ~~pg~cw~f~g------~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g~~~~ 356 (365)
.-++.+|.-.. ..-.|+|.|-.+..|++|.+..-... . ...|++|+|+.-.++
T Consensus 36 G~~~T~W~s~~~~~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~-----~-~~~~~~~~I~~S~Dg 94 (159)
T 3f2z_A 36 GNIETFWHSRWQGGSDPLPYEIIIDMNHRVKIAQIELLPRGRG-----S-NNPIKVVRFEASEDG 94 (159)
T ss_dssp SCTTCCEECCCTTCCCCSCEEEEEEEEEEEEEEEEEEEECCTT-----C-CCCCCEEEEEEESSS
T ss_pred CCCCCeEEcCCcCCCCCCCEEEEEECCCceEEEEEEEEecCCC-----C-CCCeeEEEEEEEcCC
Confidence 34566776543 34589999999999999998543221 1 357999999987665
No 56
>1w6s_B Methanol dehydrogenase subunit 2; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: a.137.2.1 PDB: 1h4j_B* 1h4i_B* 2d0v_B*
Probab=24.55 E-value=18 Score=27.00 Aligned_cols=9 Identities=22% Similarity=-0.078 Sum_probs=7.3
Q ss_pred CCCCCeeee
Q psy13339 298 KMRTNGMAF 306 (365)
Q Consensus 298 ~~pg~cw~f 306 (365)
..||+||-=
T Consensus 7 kapG~CWEp 15 (74)
T 1w6s_B 7 KAAGNCWEP 15 (74)
T ss_dssp SBTTBCCCC
T ss_pred CCCCCccCC
Confidence 579999963
No 57
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=23.95 E-value=1.8e+02 Score=23.94 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCCCCeeeee-----CCeeEEEEEecceeEeeEEEEeecCCCCCCCCCCCCCCceeEEEEeecCC
Q psy13339 298 KMRTNGMAFQ-----GAIGCLVLKLSHRIQVTRFSMEHIPKTLTPNGIIDSAPKKFAVWVSEHSQ 357 (365)
Q Consensus 298 ~~pg~cw~f~-----g~~g~~~i~l~~~i~~~~~tleHi~~~~~~~~~~~sapk~f~v~g~~~~~ 357 (365)
.-++.+|.-. +..-.|+|.|-.+..++.|.+..-.. .-...|++|+|+.-.++.
T Consensus 53 G~~~T~W~s~~~~~~~~p~~i~iDLg~~~~I~~v~~~~r~~------~~~~~~~~y~I~~S~DG~ 111 (161)
T 4a41_A 53 GKENTIWHTKYNPVEELPQSITLELGGSYEINKFTYLPRSG------AKNGNITKYELHVSEDGN 111 (161)
T ss_dssp SCTTCCEECCTTTTCCSCEEEEEEEEEEEEEEEEEEECCSS------CCTTCEEEEEEEEESSSS
T ss_pred CCCCCeEEeCCCCCCCCCEEEEEEcCCCEEEeEEEEEecCC------CCCCcEEEEEEEEECCCC
Confidence 3556777764 24568999999999999998853221 123579999999876653
No 58
>1lrw_B Methanol dehydrogenase subunit 2; heavy subunits: 8-fold beta-propeller superbarrel, oxidoreductase; HET: PQQ; 2.50A {Paracoccus denitrificans} SCOP: a.137.2.1
Probab=22.13 E-value=21 Score=27.09 Aligned_cols=9 Identities=22% Similarity=-0.090 Sum_probs=7.2
Q ss_pred CCCCCeeee
Q psy13339 298 KMRTNGMAF 306 (365)
Q Consensus 298 ~~pg~cw~f 306 (365)
..||+||-=
T Consensus 7 kapG~CWEp 15 (83)
T 1lrw_B 7 KAPGNCWEP 15 (83)
T ss_dssp SBTTBCCCC
T ss_pred CCCCCccCC
Confidence 579999963
Done!