BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13340
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O94901|SUN1_HUMAN SUN domain-containing protein 1 OS=Homo sapiens GN=SUN1 PE=1 SV=3
Length = 812
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/89 (61%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEA-KMVAD 59
+EHIPKTL+P G I SAPK FAV+GL +Y E LLG+F YD +G +LQ F+A K D
Sbjct: 720 LEHIPKTLSPTGNISSAPKDFAVYGLENEYQEEGQLLGQFTYDQDGESLQMFQALKRPDD 779
Query: 60 T-FDMVELKILSNHGNIEYTCLYRFRVHG 87
T F +VEL+I SN G+ EYTCLYRFRVHG
Sbjct: 780 TAFQIVELRIFSNWGHPEYTCLYRFRVHG 808
>sp|Q9D666|SUN1_MOUSE SUN domain-containing protein 1 OS=Mus musculus GN=Sun1 PE=1 SV=2
Length = 913
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVAD- 59
MEHIPKTL+P G I SAPK FAV+GL +Y E LG F YD EG +LQ F D
Sbjct: 822 MEHIPKTLSPTGNISSAPKDFAVYGLETEYQEEGQPLGRFTYDQEGDSLQMFHTLERPDQ 881
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
F +VEL++LSN G+ EYTCLYRFRVHG
Sbjct: 882 AFQIVELRVLSNWGHPEYTCLYRFRVHG 909
>sp|Q8BJS4|SUN2_MOUSE SUN domain-containing protein 2 OS=Mus musculus GN=Sun2 PE=1 SV=3
Length = 731
Score = 103 bits (257), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 3/92 (3%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQ--YFEAKMVA 58
+EH+PK L+PN I SAPK FA++G E + TLLG F YD +G +Q YF+A +A
Sbjct: 640 LEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGTFAYDQDGEPIQTFYFQASKMA 699
Query: 59 DTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 90
T+ +VEL+IL+N G+ EYTC+YRFRVHG A
Sbjct: 700 -TYQVVELRILTNWGHPEYTCIYRFRVHGEPA 730
>sp|Q9UH99|SUN2_HUMAN SUN domain-containing protein 2 OS=Homo sapiens GN=SUN2 PE=1 SV=3
Length = 717
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 66/92 (71%), Gaps = 3/92 (3%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQ--YFEAKMVA 58
+EH+PK L+PN I SAPK FA++G E + TLLG+F YD +G +Q +F+A +A
Sbjct: 626 LEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGKFTYDQDGEPIQTFHFQAPTMA 685
Query: 59 DTFDMVELKILSNHGNIEYTCLYRFRVHGNLA 90
T+ +VEL+IL+N G+ EYTC+YRFRVHG A
Sbjct: 686 -TYQVVELRILTNWGHPEYTCIYRFRVHGEPA 716
>sp|Q8TAQ9|SUN3_HUMAN SUN domain-containing protein 3 OS=Homo sapiens GN=SUN3 PE=2 SV=4
Length = 357
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAK-MVAD 59
MEHI + ++P+G I SAPK+F+V+G+ +K + LG+F+Y+ G T+Q FE + V++
Sbjct: 264 MEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSE 323
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
V+L I SN G+ +YTCLYRFRVHG
Sbjct: 324 YLLCVKLNIFSNWGHPKYTCLYRFRVHG 351
>sp|Q95LV7|SUN3_MACFA SUN domain-containing protein 3 OS=Macaca fascicularis GN=SUN3 PE=2
SV=1
Length = 261
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAK-MVAD 59
MEHI + ++P+G I SAPK+F+V+G+ +K + LG+F+Y+ G T+Q FE + V++
Sbjct: 168 MEHISEKVSPSGNISSAPKEFSVYGITKKCEGEEIFLGQFIYNKTGTTVQTFELQHAVSE 227
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
V+L I SN G+ +YTCLYRFRVHG
Sbjct: 228 YLLCVKLNIFSNWGHPKYTCLYRFRVHG 255
>sp|Q5SS91|SUN3_MOUSE SUN domain-containing protein 3 OS=Mus musculus GN=Sun3 PE=2 SV=1
Length = 320
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVA-D 59
MEHI + ++P+G I SAPK+F+V+G+ +K + LG+F+Y+ T+Q FE + A +
Sbjct: 227 MEHISEKVSPSGNISSAPKEFSVYGVMKKCEGEEIFLGQFIYNKMEATIQTFELQNEASE 286
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
+ V+L+ILSN G+ +YTCLYRFRVHG
Sbjct: 287 SLLCVKLQILSNWGHPKYTCLYRFRVHG 314
>sp|Q0II64|SUN3_BOVIN SUN domain-containing protein 3 OS=Bos taurus GN=SUN3 PE=2 SV=2
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADT 60
MEHI + ++P+G I SAPK+F+V+G+ ++ + LG+F+Y+ G T+Q F +
Sbjct: 267 MEHISEKVSPSGNISSAPKEFSVYGVLKQCEGEEIFLGQFVYNKTGTTVQTFALQHEVPE 326
Query: 61 FDM-VELKILSNHGNIEYTCLYRFRVHG 87
F + V+LKILSN G+ YTCLYRFRVHG
Sbjct: 327 FLLCVKLKILSNWGHPNYTCLYRFRVHG 354
>sp|Q8TC36|SUN5_HUMAN SUN domain-containing protein 5 OS=Homo sapiens GN=SUN5 PE=2 SV=1
Length = 379
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKMVADT 60
++HIPKT++ +G +D+APK F ++G+ E + LG F + E + A
Sbjct: 276 LQHIPKTISLSGSLDTAPKDFVIYGM-EGSPKEEVFLGAFQFQPENIIQMFPLQNQPARA 334
Query: 61 FDMVELKILSNHGNIEYTCLYRFRVHGNLAPSPSPVH 97
F V++KI SN GN +TCLYR RVHG++AP H
Sbjct: 335 FSAVKVKISSNWGNPGFTCLYRVRVHGSVAPPREQPH 371
>sp|Q9DA32|SUN5_MOUSE SUN domain-containing protein 5 OS=Mus musculus GN=Sun5 PE=2 SV=1
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAK-MVAD 59
++HIPKT++ +G +D+APK F ++GL E LG F + E +Q F+ + +
Sbjct: 249 LQHIPKTISLSGSLDTAPKDFVIYGL-ESLPREEVFLGAFQFQPEN-IIQTFQLQNLPPR 306
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHGNLAP 91
+F V++KI SN GN +TC+YR RVHG++ P
Sbjct: 307 SFAAVKVKISSNWGNPRFTCMYRVRVHGSVTP 338
>sp|Q20745|UNC84_CAEEL Nuclear migration and anchoring protein unc-84 OS=Caenorhabditis
elegans GN=unc-84 PE=1 SV=2
Length = 1111
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 2 EHIPKTLTPNGIIDSAPKKFAVWGLREKYDENP-TLLGEFMYDSEGPTLQYFEAKMVADT 60
EHI + P G SAPK VW ++ D N L+G++ YD +GP LQ+F AK D
Sbjct: 1020 EHIGSEVAPEGNRSSAPKGVLVWAYKQIDDLNSRVLIGDYTYDLDGPPLQFFLAKHKPDF 1079
Query: 61 -FDMVELKILSNHGNIEYTCLYRFRVHGNLA 90
VEL++ SN+G +TCLYR RVHG +
Sbjct: 1080 PVKFVELEVTSNYGA-PFTCLYRLRVHGKVV 1109
>sp|O55034|SPAG4_RAT Sperm-associated antigen 4 protein OS=Rattus norvegicus GN=Spag4
PE=1 SV=2
Length = 444
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKM-VAD 59
++H P T+ G SAP+ FAV+GL+ DE LG+F+++ + +Q F +
Sbjct: 338 LQHPPPTVAHTGGASSAPRDFAVFGLQADDDETEVFLGKFIFEVQKSEIQTFHLQNDPPS 397
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
F V+++ILSN G+ +TCLYR R HG
Sbjct: 398 AFPKVKIQILSNWGHPRFTCLYRVRAHG 425
>sp|Q9JJF2|SPAG4_MOUSE Sperm-associated antigen 4 protein OS=Mus musculus GN=Spag4 PE=2
SV=3
Length = 443
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 2/88 (2%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKM-VAD 59
++H P T+ G SAP+ FAV+GL+ DE LG+F++D + +Q F +
Sbjct: 338 LQHPPPTVAHTGGASSAPRDFAVYGLQAD-DETEVFLGKFIFDVQKSEIQTFHLQNDPPS 396
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
F V+++ILSN G+ +TCLYR R HG
Sbjct: 397 AFPKVKIQILSNWGHPRFTCLYRVRAHG 424
>sp|Q9NPE6|SPAG4_HUMAN Sperm-associated antigen 4 protein OS=Homo sapiens GN=SPAG4 PE=2
SV=1
Length = 437
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSEGPTLQYFEAKM-VAD 59
++H P ++ G +SAP+ FAV+GL + YDE LG+F +D E +Q F +
Sbjct: 336 LQHPPPSVEHTGGANSAPRDFAVFGL-QVYDETEVSLGKFTFDVEKSEIQTFHLQNDPPA 394
Query: 60 TFDMVELKILSNHGNIEYTCLYRFRVHG 87
F V+++ILSN G+ +TCLYR R HG
Sbjct: 395 AFPKVKIQILSNWGHPRFTCLYRVRAHG 422
>sp|Q558Z2|SUN1_DICDI Sun domain-containing protein 1 OS=Dictyostelium discoideum GN=sun1
PE=1 SV=1
Length = 905
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 56/111 (50%), Gaps = 22/111 (19%)
Query: 1 MEHIPKTLTPNGIIDSAPKKFAVWGLREKYDENPTLLGEFMYDSE-GPTLQYFEAKMVAD 59
MEHI ++ + IDSAPK+F V+GL D +L G F YD+ LQ F+ +
Sbjct: 757 MEHISSNISHH--IDSAPKEFQVFGLINSSDIGQSL-GVFTYDTTINRHLQTFKVNKIQS 813
Query: 60 T-----------------FDMVELKILSNHGNIEYTCLYRFRVHGNLAPSP 93
T F V L+ILSNHG YTC+YRFRVHG P P
Sbjct: 814 TTTTTTNQDQNDDDNIQEFSHVALRILSNHG-YRYTCIYRFRVHGYQIPHP 863
>sp|Q09825|SAD1_SCHPO Spindle pole body-associated protein sad1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sad1 PE=1 SV=1
Length = 514
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 14 IDSAPKKFAVW--GLREKYDENPTLLGEFMYDSEGPTLQYFEAK----MVADTFDMVELK 67
+ SAPK F +W G+ K LLG+ Y ++Q F + +VA+ V LK
Sbjct: 409 LSSAPKDFELWVQGMSSKMF---VLLGKARYSLTEDSIQTFSFESSNYIVAEPIQNVILK 465
Query: 68 ILSNHGNIEYTCLYRFRVHGNL 89
I SN GN YTCLY+ RVHG +
Sbjct: 466 IKSNWGNPNYTCLYQVRVHGTV 487
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,421,927
Number of Sequences: 539616
Number of extensions: 1876338
Number of successful extensions: 3328
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3289
Number of HSP's gapped (non-prelim): 25
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)