BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13343
(396 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48430|SOX2_CHICK Transcription factor SOX-2 OS=Gallus gallus GN=SOX2 PE=1 SV=1
Length = 315
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 142/317 (44%), Positives = 170/317 (53%), Gaps = 59/317 (18%)
Query: 58 PLHPSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRL 117
P S N+NS + +N+ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRL
Sbjct: 14 PQQTSGGGTGNSNSAANNQKNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL 73
Query: 118 GAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQN 177
GAEWKLL+E KRPFIDEAKRLRA+HMKEHPDYKYRPRRKTKTL+KKDKY L G L
Sbjct: 74 GAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPG 133
Query: 178 TSSSNDVTRNSSSVTTSAQQNSAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMS 235
T++ +++ Q R Y NG+ GY M + Y QH H +
Sbjct: 134 TNTMTTGVGVGATLGAGVNQ----RMDSYAHMNGWTNGGYGMMQEQLGYPQHPGLNAHNA 189
Query: 236 SGYP---RYDMTGM-HPSSTSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGS 291
+ RYD++ + + S TS +YMNG SP +SM S+S G
Sbjct: 190 AQMQPMHRYDVSALQYNSMTSSQTYMNG----------------SPTYSM---SYSQQG- 229
Query: 292 SVKSEPVSPSSGGGILTPTPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNG 351
TPG + +VK E + SS +
Sbjct: 230 ------------------TPGMALGSMGSVVKTE-----------SSSSPPVVTSSSHSR 260
Query: 352 APPNAGDLRHMISMYLP 368
AP AGDLR MISMYLP
Sbjct: 261 APCQAGDLRDMISMYLP 277
>sp|P54231|SOX2_SHEEP Transcription factor SOX-2 OS=Ovis aries GN=SOX2 PE=3 SV=1
Length = 320
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 173/336 (51%), Gaps = 69/336 (20%)
Query: 77 QNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEA 136
+N+ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEA
Sbjct: 38 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEA 97
Query: 137 KRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQ 196
KRLRA+HMKEHPDYKYRPRRKTKTL+KKDKY L G L +S + +
Sbjct: 98 KRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVN 157
Query: 197 QNSAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP---RYDMTGM-HPSS 250
Q R Y NG+ Y M D Y QH H ++ RYD++ + + S
Sbjct: 158 Q----RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSM 213
Query: 251 TSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPT 310
TS +YMNG SP +SM S+S G T
Sbjct: 214 TSSQTYMNG----------------SPTYSM---SYSQQG-------------------T 235
Query: 311 PGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL--- 367
PG + +VK E SS + AP AGDLR MISMYL
Sbjct: 236 PGMALGSMGSVVKSE-----------ASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGA 284
Query: 368 --PEQQEQARLQAMYQQQAGHPP-----EGMPLTHM 396
PE +RL Q+G P +PL+HM
Sbjct: 285 EVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 320
>sp|P48431|SOX2_HUMAN Transcription factor SOX-2 OS=Homo sapiens GN=SOX2 PE=1 SV=1
Length = 317
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 147/336 (43%), Positives = 173/336 (51%), Gaps = 69/336 (20%)
Query: 77 QNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEA 136
+N+ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEA
Sbjct: 35 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEA 94
Query: 137 KRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQ 196
KRLRA+HMKEHPDYKYRPRRKTKTL+KKDKY L G L +S + +
Sbjct: 95 KRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVN 154
Query: 197 QNSAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP---RYDMTGM-HPSS 250
Q R Y NG+ Y M D Y QH H ++ RYD++ + + S
Sbjct: 155 Q----RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSM 210
Query: 251 TSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPT 310
TS +YMNG SP +SM S+S G T
Sbjct: 211 TSSQTYMNG----------------SPTYSM---SYSQQG-------------------T 232
Query: 311 PGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL--- 367
PG + +VK E SS + AP AGDLR MISMYL
Sbjct: 233 PGMALGSMGSVVKSE-----------ASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGA 281
Query: 368 --PEQQEQARLQAMYQQQAGHPP-----EGMPLTHM 396
PE +RL Q+G P +PL+HM
Sbjct: 282 EVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 317
>sp|Q6NVN0|SOX2_XENTR Transcription factor Sox-2 OS=Xenopus tropicalis GN=sox2 PE=2 SV=1
Length = 311
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 171/332 (51%), Gaps = 71/332 (21%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
A+HMKEHPDYKYRPRRKTKTL+KKDKY L G L +N +T S V S
Sbjct: 95 ALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLL---APGANPMT---SGVGASLGAGVN 148
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP---RYDMTGM-HPSSTSLN 254
R Y NG+ GY M + Y QH + H + RYD++ + + S +S
Sbjct: 149 QRMDTYAHMNGWTNGGYGMMQEQLGYPQHPGLSAHNAPQMQPMHRYDVSALQYNSMSSSQ 208
Query: 255 SYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPTPGSG 314
+YMN GSP +SM S G S+
Sbjct: 209 TYMN----------------GSPTYSMSYSQQGAPGMSL--------------------- 231
Query: 315 PPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL-----PE 369
GS + + + SS + AP AGDLR MISMYL PE
Sbjct: 232 ------------GSMGSVVKSESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPE 279
Query: 370 QQEQARLQAMYQQQ----AGHPPEG-MPLTHM 396
Q+RL Q AG G +PL+HM
Sbjct: 280 PAAQSRLHMSQHYQSASVAGTAINGTLPLSHM 311
>sp|O42569|SOX2_XENLA Transcription factor Sox-2 OS=Xenopus laevis GN=sox2 PE=2 SV=1
Length = 311
Score = 194 bits (494), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 170/332 (51%), Gaps = 71/332 (21%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
A+HMKEHPDYKYRPRRKTKTL+KKDKY L G L +N +T S V S
Sbjct: 95 ALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLL---APGANAMT---SGVGGSLGAGVN 148
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP---RYDMTGM-HPSSTSLN 254
R Y NG+ GY M + Y QH H + RYD++ + + S +S
Sbjct: 149 QRMDTYAHMNGWTNGGYGMMQEQLGYPQHPGLNAHNAPQMQPMHRYDVSALQYNSMSSSQ 208
Query: 255 SYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPTPGSG 314
+YMN GSP +SM S G S+
Sbjct: 209 TYMN----------------GSPTYSMSYSQQGAPGMSL--------------------- 231
Query: 315 PPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL-----PE 369
GS + + + SS + AP AGDLR MISMYL PE
Sbjct: 232 ------------GSMGSVVKSESSSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPE 279
Query: 370 QQEQARLQAMYQQQ----AGHPPEG-MPLTHM 396
Q+RL Q AG G +PL+HM
Sbjct: 280 SAAQSRLHMSQHYQSASVAGTGINGTLPLSHM 311
>sp|P48432|SOX2_MOUSE Transcription factor SOX-2 OS=Mus musculus GN=Sox2 PE=1 SV=2
Length = 319
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/336 (43%), Positives = 172/336 (51%), Gaps = 69/336 (20%)
Query: 77 QNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEA 136
+N+ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEA
Sbjct: 37 KNSPDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEA 96
Query: 137 KRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQ 196
KRLRA+HMKEHPDYKYRPRRKTKTL+KKDKY L G L +S + +
Sbjct: 97 KRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGGGLN 156
Query: 197 QNSAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP---RYDMTGM-HPSS 250
Q R Y NG+ Y M + Y QH H ++ RY ++ + + S
Sbjct: 157 Q----RMDSYAHMNGWSNGSYSMMQEQLGYPQHPGLNAHGAAQMQPMHRYVVSALQYNSM 212
Query: 251 TSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPT 310
TS +YMNG SP +SM S+S G T
Sbjct: 213 TSSQTYMNG----------------SPTYSM---SYSQQG-------------------T 234
Query: 311 PGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL--- 367
PG + +VK E SS + AP AGDLR MISMYL
Sbjct: 235 PGMALGSMGSVVKSE-----------ASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGA 283
Query: 368 --PEQQEQARLQAMYQQQAGHPP-----EGMPLTHM 396
PE +RL Q+G P +PL+HM
Sbjct: 284 EVPEPAAPSRLHMAQHYQSGPVPGTAKYGTLPLSHM 319
>sp|Q6EJB7|SOX3_DANRE Transcription factor Sox-3 OS=Danio rerio GN=sox3 PE=1 SV=1
Length = 300
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/345 (42%), Positives = 171/345 (49%), Gaps = 79/345 (22%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
T NNS N + DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL
Sbjct: 22 TGGKNNSANDQ-----DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLL 76
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDV 184
+ KRPFIDEAKRLRA+HMKEHPDYKYRPRRKTKTLLKKDKY L G L ++ N+
Sbjct: 77 TDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYSLPGGLLAPGANAVNNA 136
Query: 185 TRNSSSVTTSAQQNSAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYPRYD 242
S + Y NG+ + Y M D Y QH + + RYD
Sbjct: 137 V-------------SVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMHRYD 183
Query: 243 MTGMHPSSTSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSS 302
M G+ Y M +TA T A S Y SM SP+ + S + S
Sbjct: 184 MAGLQ--------------YPMMSTAQTYMNAASTYSSM-----SPAYTQQTSSAMGLGS 224
Query: 303 GGGILTPTPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHM 362
+ P S PP +R GDLR M
Sbjct: 225 MASVCKTEPSSPPPAITSHSQRAC-----------------------------LGDLRDM 255
Query: 363 ISMYLPEQQEQA--------RLQAM--YQQQAGHPPEG-MPLTHM 396
ISMYLP + A RL ++ + Q AG G +PLTH+
Sbjct: 256 ISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI 300
>sp|P55863|SOX3A_XENLA Transcription factor Sox-3-A OS=Xenopus laevis GN=sox3-a PE=1 SV=1
Length = 309
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 153/338 (45%), Positives = 179/338 (52%), Gaps = 88/338 (26%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKRPFIDEAKRLR 97
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMK++PDYKYRPRRKTKTLLKKDKY L GNL+ + V+ +SSV
Sbjct: 98 AVHMKDYPDYKYRPRRKTKTLLKKDKYSL-PGNLL-----APGVSPVASSVGV------G 145
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTT-HMSSGYPRYDMTGMH--PSSTSL-N 254
R Y NG+ Y M D Y QH A + M RYDM+G+ P TS N
Sbjct: 146 QRIDTYAHMNGWTNGAYSLMQDQLGYSQHPAMNSPQMQQIQHRYDMSGLQYNPMMTSAQN 205
Query: 255 SYMN--GSSYGMYTTATTLPGAGSPYHSMQPS---SHSPSGSSVKSEPVSPSSGGGILTP 309
+YMN S+Y M SP ++ Q S S + GS VKSEP SP
Sbjct: 206 AYMNAAASTYSM-----------SPAYNQQSSTVMSLASMGSVVKSEPSSP--------- 245
Query: 310 TPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLP- 368
PP +R GDLR MISMYLP
Sbjct: 246 -----PPAITSHTQRAC-----------------------------LGDLRDMISMYLPP 271
Query: 369 ------EQQEQARLQAM---YQQQAGHPPEG-MPLTHM 396
+ +RL ++ YQ AG G +PLTH+
Sbjct: 272 GGDASDPSLQNSRLHSVHQHYQSAAGPGVNGTVPLTHI 309
>sp|Q68FA4|SOX3_XENTR Transcription factor Sox-3 OS=Xenopus tropicalis GN=sox3 PE=2 SV=1
Length = 307
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/336 (44%), Positives = 175/336 (52%), Gaps = 86/336 (25%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+RVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLR 97
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMKE+PDYKYRPRRKTKTLLKKDKY L GNL+ + V+ +SSV
Sbjct: 98 AVHMKEYPDYKYRPRRKTKTLLKKDKYSL-PGNLL-----APGVSPVASSVGV------G 145
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTT-HMSSGYPRYDMTGMH--PSSTSLNS 255
R Y NG+ Y M D Y QH + M RYDM G+ P +S +
Sbjct: 146 QRIDTYAHMNGWTNGAYSLMQDQLGYSQHPGMNSPQMQQIQHRYDMGGLQYSPMMSSAQT 205
Query: 256 YMN--GSSYGMYTTATTLPGAGSPYHSMQPS---SHSPSGSSVKSEPVSPSSGGGILTPT 310
YMN S+Y M SP ++ Q S S GS VKSEP SP
Sbjct: 206 YMNAAASTYSM-----------SPAYNQQSSTVMSLGSMGSVVKSEPSSP---------- 244
Query: 311 PGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL--- 367
PP +R GDLR MISMYL
Sbjct: 245 ----PPAITSHTQRA-----------------------------CLGDLRDMISMYLPPG 271
Query: 368 -----PEQQEQARLQAMYQ--QQAGHPPEGMPLTHM 396
P + +RL +++Q Q A P +PLTH+
Sbjct: 272 GDASDPSSLQSSRLHSVHQHYQSAAGPNGTVPLTHI 307
>sp|Q9DDD7|SX19B_DANRE Transcription factor Sox-19b OS=Danio rerio GN=sox19b PE=1 SV=1
Length = 292
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 108/139 (77%), Gaps = 6/139 (4%)
Query: 48 PH-VTHNP-MSNPLHPSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDN 105
PH + H+P MS P N ++ + + + +D+VKRPMNAFMVWSRGQRRKMAQ+N
Sbjct: 15 PHTLQHSPGMSPPGSGVGNAHHVSKTACPPGVDPMDKVKRPMNAFMVWSRGQRRKMAQEN 74
Query: 106 PKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKD 165
PKMHNSEISKRLGAEWKLL + KRPFIDEAKRLRAVHMKE+PDYKY+PRRKTK L+KKD
Sbjct: 75 PKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTKALMKKD 134
Query: 166 ----KYPLGSGNLIQNTSS 180
KYPL +GNL+ + +
Sbjct: 135 NPVGKYPLAAGNLLASAVA 153
>sp|Q5FWM3|SOX3B_XENLA Transcription factor Sox-3-B OS=Xenopus laevis GN=sox3-b PE=2 SV=1
Length = 307
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 148/338 (43%), Positives = 176/338 (52%), Gaps = 90/338 (26%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLR 97
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMK++PDYKYRPRRKTKTLLKKDKY L GNL+ + + S V
Sbjct: 98 AVHMKDYPDYKYRPRRKTKTLLKKDKYSL-PGNLL-----APGINPVSGGV--------G 143
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAY-TTHMSSGYPRYDMTGMH--PSSTSLNS 255
R Y NG+ Y M + Y QH A ++ M RYDM G+ P +S +
Sbjct: 144 QRIDTYPHMNGWTNGAYSLMQEQLGYGQHPAMNSSQMQQIQHRYDMGGLQYSPMMSSAQT 203
Query: 256 YMN--GSSYGMYTTATTLPGAGSPYHSMQPS---SHSPSGSSVKSEPVSPSSGGGILTPT 310
YMN S+Y M SP ++ Q S S + GS VKSEP SP
Sbjct: 204 YMNAAASTYSM-----------SPAYNQQSSTVMSLASMGSVVKSEPSSP---------- 242
Query: 311 PGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLP-- 368
PP +R GDLR MISMYLP
Sbjct: 243 ----PPAITSHTQRAC-----------------------------LGDLRDMISMYLPPG 269
Query: 369 ------EQQEQARLQAMYQ--QQAGHPPEG--MPLTHM 396
+ +RL +++Q Q AG P +PLTH+
Sbjct: 270 GDAGDHSSLQNSRLHSVHQHYQSAGGPGVNGTVPLTHI 307
>sp|Q7SZS1|SX21A_DANRE Transcription factor Sox-21-A OS=Danio rerio GN=sox21a PE=2 SV=1
Length = 239
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/129 (65%), Positives = 97/129 (75%), Gaps = 6/129 (4%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMA DNPKMHNSEISKRLG EWKLL++ KRPFIDEAKRL
Sbjct: 5 MDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDK------YPLGSGNLIQNTSSSNDVTRNSSSVTT 193
RAVHMKEHPDYKYRPRRK K L+KKD+ Y LG G+ +++ S D +S S
Sbjct: 65 RAVHMKEHPDYKYRPRRKPKNLIKKDRYHFNVTYNLGEGDPLKSARLSGDALSDSLSAEK 124
Query: 194 SAQQNSAAR 202
++ +A R
Sbjct: 125 TSVAAAATR 133
>sp|Q811W0|SOX21_MOUSE Transcription factor SOX-21 OS=Mus musculus GN=Sox21 PE=2 SV=1
Length = 276
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 87/99 (87%), Gaps = 4/99 (4%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY----PLGSGNL 174
RA+HMKEHPDYKYRPRRK KTLLKKDK+ P G G++
Sbjct: 65 RAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSV 103
>sp|Q9Y651|SOX21_HUMAN Transcription factor SOX-21 OS=Homo sapiens GN=SOX21 PE=2 SV=1
Length = 276
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/99 (81%), Positives = 86/99 (86%), Gaps = 4/99 (4%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY----PLGSGNL 174
RA+HMKEHPDYKYRPRRK KTLLKKDK+ P G G +
Sbjct: 65 RAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGV 103
>sp|Q9W7R5|SOX21_CHICK Transcription factor SOX-21 OS=Gallus gallus GN=SOX21 PE=2 SV=1
Length = 280
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 81/102 (79%), Positives = 89/102 (87%), Gaps = 4/102 (3%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY----PLGSGNLIQN 177
RA+HMKEHPDYKYRPRRK KTLLKKDK+ P G G + ++
Sbjct: 65 RAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGAVAEH 106
>sp|Q6RVD7|SX21B_DANRE Transcription factor Sox-21-B OS=Danio rerio GN=sox21b PE=2 SV=1
Length = 245
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 77/88 (87%), Positives = 82/88 (93%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 MDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY 167
RA+HMKEHPDYKYRPRRK KTL+KKDK+
Sbjct: 65 RAMHMKEHPDYKYRPRRKPKTLMKKDKF 92
>sp|P47792|SX19A_DANRE Transcription factor Sox-19a OS=Danio rerio GN=sox19a PE=1 SV=2
Length = 297
Score = 171 bits (433), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/103 (76%), Positives = 90/103 (87%), Gaps = 4/103 (3%)
Query: 70 NSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAK 129
NS ++ + +D+VKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL + K
Sbjct: 40 NSQQQQSSDPMDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEK 99
Query: 130 RPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKD----KYP 168
RPFIDEAKRLRA+HMKE+PDYKY+PRRKTK +LKKD KYP
Sbjct: 100 RPFIDEAKRLRALHMKEYPDYKYKPRRKTKPVLKKDNPAAKYP 142
>sp|P48433|SOX3_CHICK Transcription factor SOX-3 OS=Gallus gallus GN=SOX3 PE=2 SV=1
Length = 312
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 169/331 (51%), Gaps = 77/331 (23%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 44 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLR 103
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMKE+PDYKYRPRRKTKTLLKKDKY L GNL S+ +A
Sbjct: 104 AVHMKEYPDYKYRPRRKTKTLLKKDKYSL-PGNLWPPGSAG------------AAAVGVG 150
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYPRYDMTGMH--PSSTSLNSY 256
R Y NG+ Y M D Y QH + RYDM G+ P ++ +Y
Sbjct: 151 QRIDTYAHMNGWTNGAYSLMQDQLGYGQHPGMNSPQLQQMHRYDMPGLQYSPMMSTAQTY 210
Query: 257 MNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSPSSGGGILTPTPGSGPP 316
MN G++ P P +M S GS VKSEP S
Sbjct: 211 MNA---GLHLQHVPRPYGQQPSTAMSLGS---MGSVVKSEPSS----------------- 247
Query: 317 TGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYL--------P 368
+P + +S L G+LR MISMYL P
Sbjct: 248 -----------APPAITSHSQRACL---------------GELRDMISMYLGPGGDATHP 281
Query: 369 EQQEQARLQAMYQ--QQAGHPPEG-MPLTHM 396
+ +RL +++Q Q AG G +PLTH+
Sbjct: 282 SALQGSRLHSVHQHYQSAGTRVNGTVPLTHI 312
>sp|A4QNG3|SOX14_XENTR Transcription factor Sox-14 OS=Xenopus tropicalis GN=sox14 PE=2
SV=1
Length = 239
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/88 (86%), Positives = 82/88 (93%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRL
Sbjct: 5 VDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY 167
RA HMKEHPDYKYRPRRK K LLKKD+Y
Sbjct: 65 RAQHMKEHPDYKYRPRRKPKNLLKKDRY 92
>sp|B0ZTE2|SOX14_XENLA Transcription factor Sox-14 OS=Xenopus laevis GN=sox14 PE=2 SV=1
Length = 239
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 76/88 (86%), Positives = 82/88 (93%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRL
Sbjct: 5 VDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY 167
RA HMKEHPDYKYRPRRK K LLKKD+Y
Sbjct: 65 RAQHMKEHPDYKYRPRRKPKNLLKKDRY 92
>sp|B0ZTE1|SOX21_XENLA Transcription factor Sox-21 OS=Xenopus laevis GN=sox21 PE=2 SV=1
Length = 262
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/88 (87%), Positives = 82/88 (93%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 LDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRL 64
Query: 140 RAVHMKEHPDYKYRPRRKTKTLLKKDKY 167
RA+HMK+HPDYKYRPRRK KTLLKKDK+
Sbjct: 65 RAMHMKDHPDYKYRPRRKPKTLLKKDKF 92
>sp|Q9W7R6|SOX14_CHICK Transcription factor SOX-14 OS=Gallus gallus GN=SOX14 PE=2 SV=1
Length = 240
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 81/87 (93%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKY 167
A HMKEHPDYKYRPRRK K LLKKD+Y
Sbjct: 66 AQHMKEHPDYKYRPRRKPKNLLKKDRY 92
>sp|P61259|SOX14_MACFA Transcription factor SOX-14 OS=Macaca fascicularis GN=SOX14 PE=2
SV=1
Length = 240
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 114/180 (63%), Gaps = 9/180 (5%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
A HMKEHPDYKYRPRRK K LLKKD+Y + ++ + V S SA
Sbjct: 66 AQHMKEHPDYKYRPRRKPKNLLKKDRYVFP----LPYLGDTDPLKAAGLPVGASDGLLSA 121
Query: 201 ARESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGS 260
++ +P P ++DPA Q S+ P TG P +++L Y NG+
Sbjct: 122 PEKARAFLPPASAPYS-LLDPA---QFSSSAIQKMGEVPHTLATGALPYASTLG-YQNGA 176
>sp|O95416|SOX14_HUMAN Transcription factor SOX-14 OS=Homo sapiens GN=SOX14 PE=2 SV=1
Length = 240
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 114/180 (63%), Gaps = 9/180 (5%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
A HMKEHPDYKYRPRRK K LLKKD+Y + ++ + V S SA
Sbjct: 66 AQHMKEHPDYKYRPRRKPKNLLKKDRYVFP----LPYLGDTDPLKAAGLPVGASDGLLSA 121
Query: 201 ARESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGS 260
++ +P P ++DPA Q S+ P TG P +++L Y NG+
Sbjct: 122 PEKARAFLPPASAPYS-LLDPA---QFSSSAIQKMGEVPHTLATGALPYASTLG-YQNGA 176
>sp|Q32PP9|SOX14_DANRE Transcription factor Sox-14 OS=Danio rerio GN=sox14 PE=2 SV=1
Length = 238
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 81/87 (93%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLR 65
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKY 167
A HMKEHPDYKYRPRRK K LLKKD+Y
Sbjct: 66 AQHMKEHPDYKYRPRRKPKNLLKKDRY 92
>sp|Q04892|SOX14_MOUSE Transcription factor SOX-14 OS=Mus musculus GN=Sox14 PE=2 SV=2
Length = 240
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/87 (87%), Positives = 81/87 (93%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKY 167
A HMKEHPDYKYRPRRK K LLKKD+Y
Sbjct: 66 AQHMKEHPDYKYRPRRKPKNLLKKDRY 92
>sp|Q6DGL6|SOX1A_DANRE Transcription factor Sox-1a OS=Danio rerio GN=sox1a PE=2 SV=2
Length = 336
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 85/105 (80%), Gaps = 3/105 (2%)
Query: 55 MSNPLH---PSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNS 111
M LH P NTN NS ++ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNS
Sbjct: 6 METDLHSPGPQTNTNPGQTGPNSGSKANQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNS 65
Query: 112 EISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRR 156
EISKRLGAEWK+++E KRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 66 EISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRR 110
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 19/72 (26%)
Query: 341 LVKREYSSPNGAPPNA--------GDLRHMISMYLPEQQE-----QARLQAM---YQQQA 384
LVK E PN +PP GDLR MISMYLP + Q+RL A+ YQ
Sbjct: 268 LVKSE---PNISPPVTTHSRGPCPGDLREMISMYLPTGESGDPSVQSRLHALPQHYQSTT 324
Query: 385 GHPPEGMPLTHM 396
+PLTH+
Sbjct: 325 AGVNGTVPLTHI 336
>sp|Q2PG84|SOX1_XENLA Transcription factor Sox-1 OS=Xenopus laevis GN=sox1 PE=2 SV=1
Length = 393
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 72/89 (80%), Positives = 79/89 (88%)
Query: 68 NNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQ 127
NN N+ + DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E
Sbjct: 19 NNTGQGGGNKASQDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEA 78
Query: 128 AKRPFIDEAKRLRAVHMKEHPDYKYRPRR 156
KRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 79 EKRPFIDEAKRLRALHMKEHPDYKYRPRR 107
>sp|A2TED3|SOX1_XENTR Transcription factor Sox-1 OS=Xenopus tropicalis GN=sox1 PE=2 SV=1
Length = 401
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/105 (73%), Positives = 84/105 (80%), Gaps = 5/105 (4%)
Query: 52 HNPMSNPLHPSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNS 111
H+P P PS+ N NQ DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNS
Sbjct: 11 HSPGVQP--PSNTGQTGGGGGNKANQ---DRVKRPMNAFMVWSRGQRRKMAQENPKMHNS 65
Query: 112 EISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRR 156
EISKRLGAEWK+++E KRPFIDEAKRLRA+HMKEHPDYKYRPRR
Sbjct: 66 EISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR 110
Score = 32.7 bits (73), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 349 PNGAPPNAGDLRHMISMYLPEQQE 372
P+ PP GDLR MISMYLP E
Sbjct: 333 PHNRPPCPGDLREMISMYLPSGGE 356
>sp|P41225|SOX3_HUMAN Transcription factor SOX-3 OS=Homo sapiens GN=SOX3 PE=1 SV=2
Length = 446
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 175/356 (49%), Gaps = 86/356 (24%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 137 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 196
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMKE+PDYKYRPRRKTKTLLKKDKY L SG L+ +++ +++ S+
Sbjct: 197 AVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSG-LLPPGAAAAAAAAAAAAAAASSPVGVG 255
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYP----RYDMTGMHPSST--- 251
R Y NG+ Y + + Y Q + ++ RYDM G+ S
Sbjct: 256 QRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPPMHRYDMAGLQYSPMMPP 315
Query: 252 SLNSYMN-------GSSYGMYTTATTLPGAGSPYHSMQPS------------SHSPSGSS 292
SYMN S YG + T A + + QP+ S P GS
Sbjct: 316 GAQSYMNVAAAAAAASGYGGMAPSATA--AAAAAYGQQPATAAAAAAAAAAMSLGPMGSV 373
Query: 293 VKSEPVSPSSGGGILTPTPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGA 352
VKSEP SP P + +S L
Sbjct: 374 VKSEPSSP----------------------------PPAIASHSQRACL----------- 394
Query: 353 PPNAGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQAGHPPEG-MPLTHM 396
GDLR MISMYLP + A RL ++Q Q AG G +PLTH+
Sbjct: 395 ----GDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQGAGTAVNGTVPLTHI 446
>sp|P53784|SOX3_MOUSE Transcription factor SOX-3 OS=Mus musculus GN=Sox3 PE=1 SV=2
Length = 375
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 171/356 (48%), Gaps = 87/356 (24%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 67 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 126
Query: 141 AVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSSSNDVTRNSSSVTTSAQQNSA 200
AVHMKE+PDYKYRPRRKTKTLLKKDKY L G L +++ +++ S+
Sbjct: 127 AVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAA--AAAAAAAAASSPVGVG 184
Query: 201 ARESMYQMPNGYMPNGYMM---DPATYQQHSAYTTHMSSGYP---RYDMTGMHPSST--- 251
R Y NG+ Y + Q S + P RYDM G+ S
Sbjct: 185 QRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQMHRYDMAGLQYSPMMPP 244
Query: 252 SLNSYMNG-------SSYGMYTTATTLPGAGSPYHSMQPS------------SHSPSGSS 292
SYMN S YG A + A + + QP+ S P GS
Sbjct: 245 GAQSYMNAAAAAAAASGYG--GMAPSAAAAAAAAYGQQPATAAAAAAAAAAMSLGPMGSV 302
Query: 293 VKSEPVSPSSGGGILTPTPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGA 352
VKSEP SP P + +S L
Sbjct: 303 VKSEPSSP----------------------------PPAIASHSQRACL----------- 323
Query: 353 PPNAGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQAGHPPEG-MPLTHM 396
GDLR MISMYLP + A RL ++Q Q AG G +PLTH+
Sbjct: 324 ----GDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQGAGTAVNGTVPLTHI 375
>sp|O57401|SOX1_CHICK Transcription factor SOX-1 OS=Gallus gallus GN=SOX1 PE=2 SV=1
Length = 373
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 74/76 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 46 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 105
Query: 141 AVHMKEHPDYKYRPRR 156
A+HMKEHPDYKYRPRR
Sbjct: 106 ALHMKEHPDYKYRPRR 121
>sp|P53783|SOX1_MOUSE Transcription factor SOX-1 OS=Mus musculus GN=Sox1 PE=2 SV=1
Length = 391
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 74/76 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 49 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 108
Query: 141 AVHMKEHPDYKYRPRR 156
A+HMKEHPDYKYRPRR
Sbjct: 109 ALHMKEHPDYKYRPRR 124
>sp|O00570|SOX1_HUMAN Transcription factor SOX-1 OS=Homo sapiens GN=SOX1 PE=1 SV=2
Length = 391
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 74/76 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 49 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 108
Query: 141 AVHMKEHPDYKYRPRR 156
A+HMKEHPDYKYRPRR
Sbjct: 109 ALHMKEHPDYKYRPRR 124
>sp|Q24533|DICH_DROME SOX domain-containing protein dichaete OS=Drosophila melanogaster
GN=D PE=2 SV=1
Length = 382
Score = 152 bits (383), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 68/80 (85%), Positives = 73/80 (91%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWSR QRR++A+DNPKMHNSEISKRLGAEWKLL E KRPFIDEAKRLRA+
Sbjct: 142 IKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRAL 201
Query: 143 HMKEHPDYKYRPRRKTKTLL 162
HMKEHPDYKYRPRRK K L
Sbjct: 202 HMKEHPDYKYRPRRKPKNPL 221
>sp|O60248|SOX15_HUMAN Protein SOX-15 OS=Homo sapiens GN=SOX15 PE=1 SV=1
Length = 233
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 74/81 (91%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL+E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEHPDYKYRPRRKTKT 160
RA H++++PDYKYRPRRK K+
Sbjct: 106 RARHLRDYPDYKYRPRRKAKS 126
>sp|P43267|SOX15_MOUSE Protein SOX-15 OS=Mus musculus GN=Sox15 PE=2 SV=3
Length = 231
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 60/80 (75%), Positives = 74/80 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL ++ KRPF++EAKRL
Sbjct: 44 LEKVKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRL 103
Query: 140 RAVHMKEHPDYKYRPRRKTK 159
RA H++++PDYKYRPRRK+K
Sbjct: 104 RARHLRDYPDYKYRPRRKSK 123
>sp|P36389|SRY_HORSE Sex-determining region Y protein OS=Equus caballus GN=SRY PE=2 SV=2
Length = 223
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 72/90 (80%)
Query: 77 QNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEA 136
+N DRVKRPMNAFMVWSR RRK+A +NP++ NSEISKRLG +WK+L E K PF +EA
Sbjct: 48 ENGQDRVKRPMNAFMVWSRDHRRKVALENPQLQNSEISKRLGCQWKMLTEAEKLPFFEEA 107
Query: 137 KRLRAVHMKEHPDYKYRPRRKTKTLLKKDK 166
+RLRA+H +++PDYKYRPRRK K K DK
Sbjct: 108 QRLRAMHQEKYPDYKYRPRRKAKMPQKSDK 137
>sp|P36395|SRY_SMIMA Sex-determining region Y protein OS=Sminthopsis macroura GN=SRY
PE=2 SV=1
Length = 208
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 78/113 (69%), Gaps = 6/113 (5%)
Query: 78 NAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAK 137
N RVKRPMNAFMVWS+ QRRK+A NPKMHNSEISK+LG WKLL++ KRPFIDEAK
Sbjct: 30 NCSSRVKRPMNAFMVWSQTQRRKVALQNPKMHNSEISKQLGVTWKLLSDSEKRPFIDEAK 89
Query: 138 RLRAVHMKEHPDYKYRPRRKTKTLLK-----KDKYPLGSGNLIQNTSSSNDVT 185
RLR H K+ DYKY+PRRKTK+ LK KD + LI+ D T
Sbjct: 90 RLRDKH-KQVSDYKYQPRRKTKSFLKNVYNHKDHLTKATDQLIKTQHLKEDST 141
>sp|P36393|SRY_PIG Sex-determining region Y protein OS=Sus scrofa GN=SRY PE=3 SV=2
Length = 208
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 92/142 (64%), Gaps = 10/142 (7%)
Query: 19 LSSYGSMVHSNMMSLSQSPSSVVHHQNI---GPHVTHNPMSNPLHPSHNTNNNNNSTNSK 75
+ SY S + + + SP++ QNI G + P N H++N+ + S
Sbjct: 2 VQSYASAMFRVLKADDYSPAA--QQQNILALGKGSSLFPTDN-----HSSNDGRETRGSG 54
Query: 76 NQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDE 135
++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISK LG +WK+L E KRPF +E
Sbjct: 55 RESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRPFFEE 114
Query: 136 AKRLRAVHMKEHPDYKYRPRRK 157
A+RL+AVH ++P YKYRPRRK
Sbjct: 115 AQRLQAVHRDKYPGYKYRPRRK 136
>sp|Q28783|SRY_PONPY Sex-determining region Y protein OS=Pongo pygmaeus GN=SRY PE=3 SV=1
Length = 233
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 69/83 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRKMA +NPKM NSEISK+LG +WK+L E K PF EA++L+
Sbjct: 58 DRVKRPMNAFIVWSRDQRRKMALENPKMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQ 117
Query: 141 AVHMKEHPDYKYRPRRKTKTLLK 163
A+H +++P+YKYRPRRK K L K
Sbjct: 118 AMHREKYPNYKYRPRRKAKMLQK 140
>sp|Q864Q9|SRY_BALPH Sex-determining region Y protein OS=Balaenoptera physalus GN=SRY
PE=3 SV=1
Length = 204
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 59 LHPSHNTNNNNNSTNSK-NQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRL 117
L H +N+ T ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRL
Sbjct: 29 LWTDHGGSNDRCETGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRL 88
Query: 118 GAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNL 174
G +WK+L E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S
Sbjct: 89 GYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRSQKLLPADSSVLCSRMH 148
Query: 175 IQNT 178
I+ T
Sbjct: 149 IEET 152
>sp|Q864Q8|SRY_MEGNO Sex-determining region Y protein OS=Megaptera novaeangliae GN=SRY
PE=3 SV=1
Length = 204
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Query: 59 LHPSHNTNNNNNSTNSK-NQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRL 117
L H +N+ T ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRL
Sbjct: 29 LWTDHGGSNDRCETGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRL 88
Query: 118 GAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNL 174
G +WK+L E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S
Sbjct: 89 GYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRSQKLLPADSSVLCSRMH 148
Query: 175 IQNT 178
I+ T
Sbjct: 149 IEET 152
>sp|Q69FB1|SRY_BUBBU Sex-determining region Y protein OS=Bubalus bubalis GN=SRY PE=3
SV=1
Length = 229
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 84/125 (67%), Gaps = 3/125 (2%)
Query: 39 SVVHHQNIGPHVTHNPMSNPLHPSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQR 98
+VV QNI + S+ SH+ N+ + +++ D +KRPMNAF++WSR +R
Sbjct: 13 AVVQQQNI---LAFRKDSSSCTDSHSANDQCERGENVRESSQDHIKRPMNAFILWSRERR 69
Query: 99 RKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKT 158
RK+A +NPKM NSEISK+LG EWK L + KRPF +EA+RL ++H ++P YKYRPRRK
Sbjct: 70 RKLALENPKMKNSEISKQLGYEWKRLTDAEKRPFFEEAQRLLSIHRDKYPGYKYRPRRKA 129
Query: 159 KTLLK 163
K L K
Sbjct: 130 KRLQK 134
>sp|Q864R1|SRY_BALBN Sex-determining region Y protein OS=Balaenoptera bonaerensis GN=SRY
PE=3 SV=1
Length = 204
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
+N+ + + ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRLG +WK+L
Sbjct: 36 SNDRCETGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKML 95
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNLIQNT 178
E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S I+ T
Sbjct: 96 TEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSSVLCSRMHIEET 152
>sp|Q864R2|SRY_BALAC Sex-determining region Y protein OS=Balaenoptera acutorostrata
GN=SRY PE=3 SV=1
Length = 204
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
+N+ + + ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRLG +WK+L
Sbjct: 36 SNDRCETGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKML 95
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNLIQNT 178
E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S I+ T
Sbjct: 96 TEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSSVLCSRMHIEET 152
>sp|Q864R0|SRY_BALMU Sex-determining region Y protein OS=Balaenoptera musculus GN=SRY
PE=3 SV=1
Length = 204
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 82/117 (70%), Gaps = 3/117 (2%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
+N+ + + ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRLG +WK+L
Sbjct: 36 SNDRCETGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKML 95
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNLIQNT 178
E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S I+ T
Sbjct: 96 TEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKRPQKLLPADSSVLCSRMHIEET 152
>sp|Q28447|SRY_HYLLA Sex-determining region Y protein OS=Hylobates lar GN=SRY PE=3 SV=1
Length = 204
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 68/83 (81%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRKMA +NPKM NSEISK+LG WK+L E K PF EA++L+
Sbjct: 58 DRVKRPMNAFIVWSRDQRRKMALENPKMRNSEISKQLGYRWKMLTEAEKWPFFQEAQKLQ 117
Query: 141 AVHMKEHPDYKYRPRRKTKTLLK 163
A+H +++P+YKYRPRRK K L K
Sbjct: 118 AMHREKYPNYKYRPRRKAKMLQK 140
>sp|Q864Q5|SRY_KOGSI Sex-determining region Y protein OS=Kogia sima GN=SRY PE=3 SV=1
Length = 216
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 83/117 (70%), Gaps = 3/117 (2%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
+N+ ++ + ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRLG +WK+L
Sbjct: 36 SNDRCDTGGNGRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKML 95
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK---TLLKKDKYPLGSGNLIQNT 178
E K+PF +EA+RLRA+H ++P YKYRPRRK K LL D L S I+ T
Sbjct: 96 TEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKPKRPQKLLPADSSVLCSRMHIEET 152
>sp|Q864Q2|SRY_PHOPH Sex-determining region Y protein OS=Phocoenoides phocoena GN=SRY
PE=3 SV=1
Length = 196
Score = 126 bits (316), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 75/95 (78%)
Query: 65 TNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL 124
+N+ ++ + ++ DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISKRLG +WK+L
Sbjct: 36 SNDRCDTGGNCRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKML 95
Query: 125 NEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTK 159
E K+PF +EA+RLRA+H ++P YKYRPRRK K
Sbjct: 96 TEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAK 130
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.124 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,383,481
Number of Sequences: 539616
Number of extensions: 7719275
Number of successful extensions: 79912
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 550
Number of HSP's that attempted gapping in prelim test: 39598
Number of HSP's gapped (non-prelim): 25299
length of query: 396
length of database: 191,569,459
effective HSP length: 120
effective length of query: 276
effective length of database: 126,815,539
effective search space: 35001088764
effective search space used: 35001088764
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)