Your job contains 1 sequence.
>psy13343
MLTMETDLKGGHIPPHHHLSSYGSMVHSNMMSLSQSPSSVVHHQNIGPHVTHNPMSNPLH
PSHNTNNNNNSTNSKNQNAIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAE
WKLLNEQAKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLLKKDKYPLGSGNLIQNTSS
SNDVTRNSSSVTTSAQQNSAARESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPR
YDMTGMHPSSTSLNSYMNGSSYGMYTTATTLPGAGSPYHSMQPSSHSPSGSSVKSEPVSP
SSGGGILTPTPGSGPPTGLHLVKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLR
HMISMYLPEQQEQARLQAMYQQQAGHPPEGMPLTHM
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13343
(396 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0029123 - symbol:SoxN "SoxNeuro" species:7227 "Dro... 324 1.5e-50 4
UNIPROTKB|B1PXF9 - symbol:Sox2 "Sex determining region Y-... 332 7.5e-46 3
UNIPROTKB|A2VDX8 - symbol:SOX2 "Uncharacterized protein" ... 332 1.2e-45 3
UNIPROTKB|E2R1W3 - symbol:SOX2 "Uncharacterized protein" ... 332 1.2e-45 3
UNIPROTKB|P48431 - symbol:SOX2 "Transcription factor SOX-... 332 1.2e-45 3
UNIPROTKB|P54231 - symbol:SOX2 "Transcription factor SOX-... 332 1.2e-45 3
UNIPROTKB|Q6NVN0 - symbol:sox2 "Transcription factor Sox-... 332 2.0e-45 3
UNIPROTKB|O42569 - symbol:sox2 "Transcription factor Sox-... 332 2.5e-45 3
RGD|1565646 - symbol:Sox2 "SRY (sex determining region Y)... 332 3.2e-45 3
ZFIN|ZDB-GENE-030909-1 - symbol:sox2 "SRY-box containing ... 332 6.5e-45 3
MGI|MGI:98364 - symbol:Sox2 "SRY-box containing gene 2" s... 332 4.4e-44 3
ZFIN|ZDB-GENE-980526-333 - symbol:sox3 "SRY-box containin... 325 7.9e-43 3
UNIPROTKB|P48430 - symbol:SOX2 "Transcription factor SOX-... 383 2.2e-42 2
UNIPROTKB|Q9PSV6 - symbol:Sox3 "SOX3" species:9031 "Gallu... 323 2.6e-42 3
UNIPROTKB|P48433 - symbol:SOX3 "Transcription factor SOX-... 323 2.3e-41 3
UNIPROTKB|Q5FWM3 - symbol:sox3-b "Transcription factor So... 321 7.2e-39 3
UNIPROTKB|Q68FA4 - symbol:sox3 "Transcription factor Sox-... 320 2.4e-38 3
UNIPROTKB|P55863 - symbol:sox3-a "Transcription factor So... 320 7.8e-38 3
UNIPROTKB|E2R800 - symbol:SOX3 "Uncharacterized protein" ... 315 2.6e-37 3
UNIPROTKB|I3LG51 - symbol:LOC100623770 "Uncharacterized p... 315 2.6e-37 3
MGI|MGI:98365 - symbol:Sox3 "SRY-box containing gene 3" s... 315 3.3e-37 3
UNIPROTKB|F1MIK5 - symbol:SOX1 "Uncharacterized protein" ... 327 5.1e-37 2
ZFIN|ZDB-GENE-060322-5 - symbol:sox1b "SRY-box containing... 330 8.2e-37 2
ZFIN|ZDB-GENE-040718-186 - symbol:sox1a "SRY-box containi... 327 5.7e-36 2
UNIPROTKB|A2TED3 - symbol:sox1 "Transcription factor Sox-... 327 9.2e-36 2
UNIPROTKB|O00570 - symbol:SOX1 "Transcription factor SOX-... 327 9.2e-36 2
UNIPROTKB|O57401 - symbol:SOX1 "Transcription factor SOX-... 327 1.5e-35 2
UNIPROTKB|P41225 - symbol:SOX3 "Transcription factor SOX-... 328 1.9e-35 2
UNIPROTKB|Q2PG84 - symbol:sox1 "Transcription factor Sox-... 327 6.3e-35 2
ZFIN|ZDB-GENE-010111-1 - symbol:sox19b "SRY-box containin... 322 6.3e-35 2
ZFIN|ZDB-GENE-980526-102 - symbol:sox19a "SRY-box contain... 320 9.0e-34 2
FB|FBgn0036411 - symbol:Sox21a "Sox21a" species:7227 "Dro... 328 1.5e-33 2
WB|WBGene00004949 - symbol:sox-2 species:6239 "Caenorhabd... 324 8.8e-32 2
UNIPROTKB|Q9W7R5 - symbol:SOX21 "Transcription factor SOX... 324 1.4e-31 2
WB|WBGene00004950 - symbol:sox-3 species:6239 "Caenorhabd... 334 3.0e-30 1
UNIPROTKB|E1BHN5 - symbol:LOC614121 "Uncharacterized prot... 324 3.4e-29 1
UNIPROTKB|Q9Y651 - symbol:SOX21 "Transcription factor SOX... 324 3.4e-29 1
UNIPROTKB|F2Z520 - symbol:SOX21 "Uncharacterized protein"... 324 3.4e-29 1
MGI|MGI:2654070 - symbol:Sox21 "SRY-box containing gene 2... 324 3.4e-29 1
FB|FBgn0042630 - symbol:Sox21b "Sox21b" species:7227 "Dro... 314 3.7e-29 2
UNIPROTKB|A4QNG3 - symbol:sox14 "Transcription factor Sox... 323 4.4e-29 1
UNIPROTKB|B0ZTE2 - symbol:sox14 "Transcription factor Sox... 323 4.4e-29 1
ZFIN|ZDB-GENE-040429-1 - symbol:sox21b "SRY-box containin... 322 5.6e-29 1
ZFIN|ZDB-GENE-051113-268 - symbol:sox14 "SRY-box containi... 321 7.1e-29 1
UNIPROTKB|Q9W7R6 - symbol:SOX14 "Transcription factor SOX... 320 9.1e-29 1
UNIPROTKB|O95416 - symbol:SOX14 "Transcription factor SOX... 320 9.1e-29 1
UNIPROTKB|P61259 - symbol:SOX14 "Transcription factor SOX... 320 9.1e-29 1
MGI|MGI:98362 - symbol:Sox14 "SRY-box containing gene 14"... 320 9.1e-29 1
RGD|1309654 - symbol:Sox14 "SRY (sex determining region Y... 320 9.1e-29 1
UNIPROTKB|B0ZTE1 - symbol:sox21 "Transcription factor Sox... 319 1.2e-28 1
ZFIN|ZDB-GENE-990715-6 - symbol:sox21a "SRY-box containin... 316 2.4e-28 1
UNIPROTKB|E2R3H4 - symbol:SOX15 "Uncharacterized protein"... 282 2.2e-27 2
FB|FBgn0000411 - symbol:D "Dichaete" species:7227 "Drosop... 300 1.2e-26 1
UNIPROTKB|B4DWU7 - symbol:SOX15 "Protein SOX-15" species:... 283 7.6e-25 1
UNIPROTKB|O60248 - symbol:SOX15 "Protein SOX-15" species:... 283 7.6e-25 1
UNIPROTKB|E1B9L6 - symbol:SOX15 "Uncharacterized protein"... 282 9.7e-25 1
UNIPROTKB|F1ST29 - symbol:SOX15 "Uncharacterized protein"... 282 9.7e-25 1
MGI|MGI:98363 - symbol:Sox15 "SRY-box containing gene 15"... 278 2.6e-24 1
UNIPROTKB|P48434 - symbol:SOX9 "Transcription factor SOX-... 229 1.9e-23 3
MGI|MGI:98358 - symbol:Sox10 "SRY-box containing gene 10"... 228 2.0e-23 3
UNIPROTKB|P56693 - symbol:SOX10 "Transcription factor SOX... 228 2.0e-23 3
UNIPROTKB|F1PHT3 - symbol:SOX10 "Uncharacterized protein"... 228 2.0e-23 3
UNIPROTKB|F1N6W0 - symbol:SOX10 "Uncharacterized protein"... 228 2.1e-23 3
UNIPROTKB|O18896 - symbol:SOX9 "Transcription factor SOX-... 229 2.4e-23 3
UNIPROTKB|O73668 - symbol:Sox9 "SOX9" species:9031 "Gallu... 229 2.5e-23 3
UNIPROTKB|F1P307 - symbol:SOX9 "Transcription factor SOX-... 229 2.5e-23 3
UNIPROTKB|Q7YRJ7 - symbol:SOX9 "Transcription factor SOX-... 229 3.2e-23 2
UNIPROTKB|B7ZR65 - symbol:sox9-a "Transcription factor So... 227 4.6e-23 2
UNIPROTKB|Q9BG91 - symbol:SOX9 "Transcription factor SOX-... 229 6.3e-23 2
UNIPROTKB|P48436 - symbol:SOX9 "Transcription factor SOX-... 229 6.3e-23 2
UNIPROTKB|P61753 - symbol:SOX9 "Transcription factor SOX-... 229 6.3e-23 2
UNIPROTKB|P61754 - symbol:SOX9 "Transcription factor SOX-... 229 6.3e-23 2
UNIPROTKB|F1RV30 - symbol:SOX9 "Transcription factor SOX-... 229 8.1e-23 2
UNIPROTKB|Q6DFF5 - symbol:sox9-b "Transcription factor So... 227 9.3e-23 2
UNIPROTKB|Q6F2E7 - symbol:sox9 "Transcription factor Sox-... 226 1.3e-22 2
UNIPROTKB|Q9BG89 - symbol:SOX9 "Transcription factor SOX-... 225 1.7e-22 2
MGI|MGI:98371 - symbol:Sox9 "SRY-box containing gene 9" s... 229 2.6e-22 2
UNIPROTKB|O42601 - symbol:sox17b.1 "Transcription factor ... 218 5.8e-22 2
UNIPROTKB|A5A763 - symbol:SOX10 "Transcription factor SOX... 228 9.3e-22 2
UNIPROTKB|F1PSM5 - symbol:SOX9 "Transcription factor SOX-... 215 1.0e-21 2
RGD|3735 - symbol:Sox10 "SRY (sex determining region Y)-b... 228 1.1e-21 2
MGI|MGI:98660 - symbol:Sry "sex determining region of Chr... 230 1.8e-21 2
ZFIN|ZDB-GENE-001103-1 - symbol:sox9a "SRY-box containing... 227 2.9e-21 2
FB|FBgn0005613 - symbol:Sox15 "Sox box protein 15" specie... 226 4.3e-21 3
UNIPROTKB|I3LMN8 - symbol:SRY "Sex-determining region Y p... 244 1.0e-20 1
UNIPROTKB|P36393 - symbol:SRY "Sex-determining region Y p... 244 1.0e-20 1
UNIPROTKB|Q5I921 - symbol:SRY "Sex-determining region Y p... 244 1.0e-20 1
UNIPROTKB|I3LU29 - symbol:SOX7 "Uncharacterized protein" ... 216 2.0e-20 2
WB|WBGene00004771 - symbol:sem-2 species:6239 "Caenorhabd... 219 2.5e-20 2
UNIPROTKB|A4IIJ8 - symbol:sox10 "Transcription factor Sox... 228 2.7e-20 2
ZFIN|ZDB-GENE-040426-1274 - symbol:sox4b "SRY-box contain... 217 3.4e-20 2
UNIPROTKB|F5H3H1 - symbol:SRY "Sex-determining region Y p... 238 4.4e-20 1
UNIPROTKB|F5H6J8 - symbol:SRY "Sex-determining region Y p... 238 4.4e-20 1
UNIPROTKB|Q05066 - symbol:SRY "Sex-determining region Y p... 238 4.4e-20 1
UNIPROTKB|P48435 - symbol:SOX11 "Transcription factor SOX... 219 4.5e-20 2
UNIPROTKB|E2RH58 - symbol:SOX12 "Uncharacterized protein"... 209 7.1e-20 2
UNIPROTKB|Q9XT60 - symbol:SRY "Sex-determining region Y p... 235 9.2e-20 1
RGD|3759 - symbol:Sry "sex determining region Y" species:... 235 9.2e-20 1
UNIPROTKB|O15370 - symbol:SOX12 "Transcription factor SOX... 209 9.3e-20 2
ZFIN|ZDB-GENE-001103-2 - symbol:sox9b "SRY-box containing... 218 2.4e-19 2
WARNING: Descriptions of 131 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0029123 [details] [associations]
symbol:SoxN "SoxNeuro" species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0030111 "regulation of Wnt receptor signaling pathway"
evidence=IMP] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007411 EMBL:AE014134 GO:GO:0030111 GO:GO:0045944
GO:GO:0007417 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031490
GeneTree:ENSGT00690000101940 ChiTaRS:QSOX2 HSSP:P48432 KO:K09267
FlyBase:FBgn0029123 EMBL:BT001514 RefSeq:NP_524735.1
UniGene:Dm.3272 SMR:Q9VLH8 STRING:Q9VLH8 EnsemblMetazoa:FBtr0079733
GeneID:44275 KEGG:dme:Dmel_CG18024 UCSC:CG18024-RA CTD:44275
InParanoid:Q9VLH8 OMA:HMSAHIA GenomeRNAi:44275 NextBio:837102
Uniprot:Q9VLH8
Length = 572
Score = 324 (119.1 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 61/67 (91%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA DNPKMHNSEISKRLGA+WK L+E KRPFIDEAKRLR
Sbjct: 177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLR 236
Query: 141 AVHMKEH 147
AVHMKEH
Sbjct: 237 AVHMKEH 243
Score = 131 (51.2 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 37/87 (42%), Positives = 50/87 (57%)
Query: 195 AQQNSAARESMYQM--PNGYMPNGYMM--DPATYQQHSAY-TTHMSSGYP--RYDMTGMH 247
AQQ AR+ MYQM PNGYMPNGYMM DPA +AY T++M Y RYDM M+
Sbjct: 317 AQQ---ARQDMYQMNAPNGYMPNGYMMHADPAGA---AAYQTSYMGQHYAAQRYDMGHMY 370
Query: 248 PSSTSLNSYMNGSSYGMYTTATTLPGA 274
+ ++ ++G Y ++ PG+
Sbjct: 371 NNGYAMYQTVSGGQTSPYGSSLQQPGS 397
Score = 68 (29.0 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 335 NSTDLHLVKREYSSPNGAPPNA--------GDLRHMISMY-LPEQQ 371
N + H++KREYSS A A G+L H+++MY LP++Q
Sbjct: 457 NINNNHIMKREYSSAAAAAAAAAAAAAAGGGELNHLMNMYHLPDEQ 502
Score = 61 (26.5 bits), Expect = 1.5e-50, Sum P(4) = 1.5e-50
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 1 MLTMETDLKGG--H--IPPHH 17
MLTME+D+KG H +PPHH
Sbjct: 1 MLTMESDMKGSLLHATMPPHH 21
Score = 51 (23.0 bits), Expect = 8.7e-49, Sum P(4) = 8.7e-49
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 352 APPNAGDLRHMISMY-LPEQQE------------QARLQAMYQQQAGHPPEGMPLTH 395
A G+L H+++MY LP++Q Q + Q+M QQQ P + + H
Sbjct: 482 AAAGGGELNHLMNMYHLPDEQRHLLHYQTDSPDLQQQHQSMQQQQQHLPQQHLSQQH 538
Score = 41 (19.5 bits), Expect = 1.9e-35, Sum P(3) = 1.9e-35
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 325 EYGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQ----AMY 380
+ +PNG PN +H + P GA A +M Y ++ + + AMY
Sbjct: 326 QMNAPNGYMPNGYMMH------ADPAGAA--AYQTSYMGQHYAAQRYDMGHMYNNGYAMY 377
Query: 381 QQQAG 385
Q +G
Sbjct: 378 QTVSG 382
>UNIPROTKB|B1PXF9 [details] [associations]
symbol:Sox2 "Sex determining region Y-box 2" species:9823
"Sus scrofa" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MSALQYN EMBL:CU914271 EMBL:EU503117
UniGene:Ssc.42849 ProteinModelPortal:B1PXF9 SMR:B1PXF9
STRING:B1PXF9 Ensembl:ENSSSCT00000012883 Uniprot:B1PXF9
Length = 319
Score = 332 (121.9 bits), Expect = 7.5e-46, Sum P(3) = 7.5e-46
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 41 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 100
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 101 ALHMKEH 107
Score = 89 (36.4 bits), Expect = 7.5e-46, Sum P(3) = 7.5e-46
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M D Y QH H ++ P RYD++ + + S TS +
Sbjct: 158 RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHSAAQMQPMHRYDVSALQYNSMTSSQT 217
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 218 YMNGSPTYSMSYSQQGTPG 236
Score = 88 (36.0 bits), Expect = 7.5e-46, Sum P(3) = 7.5e-46
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 260 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 319
>UNIPROTKB|A2VDX8 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0070848 "response to growth
factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
eggNOG:NOG321816 OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:DAAA02001921
EMBL:BC133458 IPI:IPI00701823 RefSeq:NP_001098933.1
UniGene:Bt.103364 SMR:A2VDX8 STRING:A2VDX8
Ensembl:ENSBTAT00000015411 GeneID:784383 KEGG:bta:784383
InParanoid:A2VDX8 NextBio:20926664 Uniprot:A2VDX8
Length = 320
Score = 332 (121.9 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 42 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 101
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 102 ALHMKEH 108
Score = 88 (36.0 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 261 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 320
Score = 87 (35.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M D Y QH H ++ P RYD++ + + S TS +
Sbjct: 159 RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQT 218
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 219 YMNGSPTYSMSYSQQGTPG 237
>UNIPROTKB|E2R1W3 [details] [associations]
symbol:SOX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0070848 "response to
growth factor stimulus" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0060235
"lens induction in camera-type eye" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IEA] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0046148
"pigment biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043586 "tongue development" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0021987 "cerebral cortex development"
evidence=IEA] [GO:0021984 "adenohypophysis development"
evidence=IEA] [GO:0021879 "forebrain neuron differentiation"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0007050 "cell cycle arrest" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0001649 "osteoblast
differentiation" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0043410 GO:GO:0045666 GO:GO:0090090 GO:GO:0035198
GO:GO:0035019 GO:GO:0001649 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0046148 GO:GO:0021879 GO:GO:0021984 GO:GO:0002052
GO:GO:0048663 GO:GO:0030910 GO:GO:0060441 GO:GO:0043281
GeneTree:ENSGT00690000101940 GO:GO:0043586 GO:GO:0060042
GO:GO:0048852 GO:GO:0050973 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 OMA:MSALQYN EMBL:AAEX03017262
RefSeq:XP_545216.3 Ensembl:ENSCAFT00000018476 GeneID:488092
KEGG:cfa:488092 NextBio:20861523 Uniprot:E2R1W3
Length = 324
Score = 332 (121.9 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 46 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 105
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 106 ALHMKEH 112
Score = 88 (36.0 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 265 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 324
Score = 87 (35.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M D Y QH H ++ P RYD++ + + S TS +
Sbjct: 163 RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQT 222
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 223 YMNGSPTYSMSYSQQGTPG 241
>UNIPROTKB|P48431 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9606 "Homo
sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021984 "adenohypophysis
development" evidence=IEA] [GO:0021987 "cerebral cortex
development" evidence=IEA] [GO:0030539 "male genitalia development"
evidence=IEA] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030910 "olfactory placode
formation" evidence=IEA] [GO:0032526 "response to retinoic acid"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043586 "tongue development" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IEA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
[GO:0048663 "neuron fate commitment" evidence=IEA] [GO:0048852
"diencephalon morphogenesis" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC;IDA;NAS] [GO:0003677 "DNA
binding" evidence=IDA;NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA;NAS] [GO:0006325 "chromatin organization"
evidence=NAS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] [GO:0001654 "eye development"
evidence=IEP] [GO:0021983 "pituitary gland development"
evidence=IEP] [GO:0030900 "forebrain development" evidence=IEP]
[GO:0048839 "inner ear development" evidence=IEP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0035019 "somatic
stem cell maintenance" evidence=IDA;IMP] [GO:0007050 "cell cycle
arrest" evidence=IDA] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0070848
"response to growth factor stimulus" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0043410 "positive regulation of MAPK cascade" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0009611 "response to
wounding" evidence=IEP] [GO:0021781 "glial cell fate commitment"
evidence=NAS] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0097150 "neuronal stem cell maintenance" evidence=ISS]
[GO:0001714 "endodermal cell fate specification" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0021987
GO:GO:0009611 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0007050 GO:GO:0006351
GO:GO:0003682 Orphanet:98938 GO:GO:0005667 GO:GO:0030539
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0021983 GO:GO:0048839 GO:GO:0050680 GO:GO:0070848
GO:GO:0060235 GO:GO:0030858 GO:GO:0001714 GO:GO:0045668
GO:GO:0006325 GO:GO:0046148 GO:GO:0021879 GO:GO:0021984
GO:GO:0002052 GO:GO:0048663 GO:GO:0030910 GO:GO:0001654
GO:GO:0060441 GO:GO:0043281 eggNOG:NOG321816 OrthoDB:EOG4MPHQV
GO:GO:0097150 GO:GO:0043586 GO:GO:0060042 GO:GO:0021781
Orphanet:3157 GO:GO:0048852 GO:GO:0050973 PDB:1O4X PDBsum:1O4X
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:Z31560 EMBL:L07335
EMBL:BC013923 IPI:IPI00009703 RefSeq:NP_003097.1 UniGene:Hs.518438
UniGene:Hs.732963 PDB:2LE4 PDBsum:2LE4 ProteinModelPortal:P48431
SMR:P48431 DIP:DIP-59913N STRING:P48431 PhosphoSite:P48431
DMDM:1351091 PRIDE:P48431 DNASU:6657 Ensembl:ENST00000325404
Ensembl:ENST00000431565 GeneID:6657 KEGG:hsa:6657 UCSC:uc003fkx.3
GeneCards:GC03P181429 HGNC:HGNC:11195 HPA:CAB010648 MIM:184429
MIM:206900 neXtProt:NX_P48431 Orphanet:77298 PharmGKB:PA36032
InParanoid:P48431 PhylomeDB:P48431 EvolutionaryTrace:P48431
GenomeRNAi:6657 NextBio:25951 Bgee:P48431 CleanEx:HS_SOX2
Genevestigator:P48431 GermOnline:ENSG00000181449 Uniprot:P48431
Length = 317
Score = 332 (121.9 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 39 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 98
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 99 ALHMKEH 105
Score = 88 (36.0 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 258 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 317
Score = 87 (35.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M D Y QH H ++ P RYD++ + + S TS +
Sbjct: 156 RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQT 215
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 216 YMNGSPTYSMSYSQQGTPG 234
>UNIPROTKB|P54231 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9940 "Ovis
aries" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=ISS] [GO:0097150
"neuronal stem cell maintenance" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0045665 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0097150 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:X96997
ProteinModelPortal:P54231 SMR:P54231 Uniprot:P54231
Length = 320
Score = 332 (121.9 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 42 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 101
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 102 ALHMKEH 108
Score = 88 (36.0 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 261 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSGPVPGTAINGTLPLSHM 320
Score = 87 (35.7 bits), Expect = 1.2e-45, Sum P(3) = 1.2e-45
Identities = 27/79 (34%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M D Y QH H ++ P RYD++ + + S TS +
Sbjct: 159 RMDSYAHMNGWSNGSYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQT 218
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 219 YMNGSPTYSMSYSQQGTPG 237
>UNIPROTKB|Q6NVN0 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0051091 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 HSSP:P48432
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6657 EMBL:CR760314 EMBL:BC067975
RefSeq:NP_998869.1 UniGene:Str.6201 ProteinModelPortal:Q6NVN0
SMR:Q6NVN0 Ensembl:ENSXETT00000004031 GeneID:407873 KEGG:xtr:407873
Xenbase:XB-GENE-484553 InParanoid:Q6NVN0 OMA:SAHNAPQ Bgee:Q6NVN0
Uniprot:Q6NVN0
Length = 311
Score = 332 (121.9 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 95 ALHMKEH 101
Score = 88 (36.0 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP-----EQQEQARLQAM--YQQQ--AGHPPEG-MPLTHM 396
SS + AP AGDLR MISMYLP E Q+RL YQ AG G +PL+HM
Sbjct: 252 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAQSRLHMSQHYQSASVAGTAINGTLPLSHM 311
Score = 85 (35.0 bits), Expect = 2.0e-45, Sum P(3) = 2.0e-45
Identities = 26/79 (32%), Positives = 38/79 (48%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ GY M + Y QH + H + P RYD++ + + S +S +
Sbjct: 150 RMDTYAHMNGWTNGGYGMMQEQLGYPQHPGLSAHNAPQMQPMHRYDVSALQYNSMSSSQT 209
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 210 YMNGSPTYSMSYSQQGAPG 228
>UNIPROTKB|O42569 [details] [associations]
symbol:sox2 "Transcription factor Sox-2" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657
EMBL:AF005476 EMBL:AF022928 EMBL:BC076717 RefSeq:NP_001081691.1
UniGene:Xl.188 ProteinModelPortal:O42569 SMR:O42569 DIP:DIP-29886N
GeneID:398000 KEGG:xla:398000 Xenbase:XB-GENE-865099 Uniprot:O42569
Length = 311
Score = 332 (121.9 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 95 ALHMKEH 101
Score = 88 (36.0 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP-----EQQEQARLQAM--YQQQ--AGHPPEG-MPLTHM 396
SS + AP AGDLR MISMYLP E Q+RL YQ AG G +PL+HM
Sbjct: 252 SSHSRAPCQAGDLRDMISMYLPGAEVPESAAQSRLHMSQHYQSASVAGTGINGTLPLSHM 311
Score = 84 (34.6 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ GY M + Y QH H + P RYD++ + + S +S +
Sbjct: 150 RMDTYAHMNGWTNGGYGMMQEQLGYPQHPGLNAHNAPQMQPMHRYDVSALQYNSMSSSQT 209
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 210 YMNGSPTYSMSYSQQGAPG 228
>RGD|1565646 [details] [associations]
symbol:Sox2 "SRY (sex determining region Y)-box 2" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IDA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IDA] [GO:0001649 "osteoblast differentiation"
evidence=IEA;ISO] [GO:0001654 "eye development" evidence=ISO]
[GO:0001708 "cell fate specification" evidence=ISO] [GO:0001714
"endodermal cell fate specification" evidence=IEA;ISO] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007050 "cell cycle
arrest" evidence=IEA;ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009611 "response to wounding" evidence=IEA;ISO] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=ISO] [GO:0021984 "adenohypophysis
development" evidence=IEA;ISO] [GO:0021987 "cerebral cortex
development" evidence=IEA;ISO] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=ISO] [GO:0030539 "male
genitalia development" evidence=IEA;ISO] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA;ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030910
"olfactory placode formation" evidence=IEA;ISO] [GO:0032526
"response to retinoic acid" evidence=IEA;ISO] [GO:0035019 "somatic
stem cell maintenance" evidence=IEA;ISO] [GO:0035198 "miRNA
binding" evidence=IEA;ISO] [GO:0042221 "response to chemical
stimulus" evidence=ISO] [GO:0042472 "inner ear morphogenesis"
evidence=IEA;ISO] [GO:0043281 "regulation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0043410 "positive regulation of MAPK cascade"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043586 "tongue development" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO] [GO:0045165 "cell fate commitment" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA;ISO] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA;ISO]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046148 "pigment biosynthetic process"
evidence=IEA;ISO] [GO:0048286 "lung alveolus development"
evidence=IEA;ISO] [GO:0048568 "embryonic organ development"
evidence=ISO] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISO] [GO:0048663 "neuron fate
commitment" evidence=IEA;ISO] [GO:0048839 "inner ear development"
evidence=ISO] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA;ISO] [GO:0048863 "stem cell differentiation"
evidence=ISO] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA;ISO] [GO:0050767 "regulation of
neurogenesis" evidence=ISO] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA;ISO]
[GO:0050973 "detection of mechanical stimulus involved in
equilibrioception" evidence=IEA;ISO] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA;ISO] [GO:0060235
"lens induction in camera-type eye" evidence=IEA;ISO] [GO:0060441
"epithelial tube branching involved in lung morphogenesis"
evidence=IEA;ISO] [GO:0070848 "response to growth factor stimulus"
evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:0097150 "neuronal
stem cell maintenance" evidence=ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1565646 GO:GO:0005829 GO:GO:0005634 GO:GO:0021987
GO:GO:0009611 GO:GO:0045944 GO:GO:0045665 GO:GO:0003700
GO:GO:0045747 GO:GO:0007050 GO:GO:0003682 GO:GO:0005667
GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0042472 GO:GO:0032526
GO:GO:0048286 GO:GO:0050910 GO:GO:0043410 GO:GO:0045666
GO:GO:0090090 GO:GO:0035198 GO:GO:0035019 GO:GO:0001649
GO:GO:0000976 GO:GO:0050680 GO:GO:0070848 GO:GO:0060235
GO:GO:0030858 GO:GO:0001714 GO:GO:0045668 GO:GO:0046148
GO:GO:0021879 GO:GO:0021984 GO:GO:0002052 GO:GO:0048663
GO:GO:0030910 GO:GO:0060441 GO:GO:0043281 EMBL:CH473961
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 GO:GO:0043586
GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 KO:K09267
InterPro:IPR022097 Pfam:PF12336 CTD:6657 OMA:MSALQYN
IPI:IPI00215605 RefSeq:NP_001102651.1 UniGene:Rn.17369 SMR:D4A543
Ensembl:ENSRNOT00000016236 GeneID:499593 KEGG:rno:499593
UCSC:RGD:1565646 NextBio:703377 Uniprot:D4A543
Length = 319
Score = 332 (121.9 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 41 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 100
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 101 ALHMKEH 107
Score = 88 (36.0 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 260 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHYQSGPVPGTAINGTLPLSHM 319
Score = 83 (34.3 bits), Expect = 3.2e-45, Sum P(3) = 3.2e-45
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M + Y QH H ++ P RYD++ + + S TS +
Sbjct: 158 RMDSYAHMNGWSNGSYSMMQEQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQT 217
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 218 YMNGSPTYSMSYSQQGTPG 236
>ZFIN|ZDB-GENE-030909-1 [details] [associations]
symbol:sox2 "SRY-box containing gene 2" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0031101 "fin regeneration" evidence=IMP]
[GO:0048592 "eye morphogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-030909-1 GO:GO:0005737 GO:GO:0051091 GO:GO:0003677
GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031101 OrthoDB:EOG4MPHQV
GeneTree:ENSGT00690000101940 GO:GO:0048592 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6657 OMA:MSALQYN EMBL:AB242329 EMBL:BC056743
EMBL:BC065656 IPI:IPI00499339 RefSeq:NP_998283.1 UniGene:Dr.5379
ProteinModelPortal:Q6P0E1 SMR:Q6P0E1 STRING:Q6P0E1 PRIDE:Q6P0E1
Ensembl:ENSDART00000104493 GeneID:378723 KEGG:dre:378723
InParanoid:Q6P0E1 NextBio:20813795 Bgee:Q6P0E1 Uniprot:Q6P0E1
Length = 315
Score = 332 (121.9 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 61/67 (91%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DR+KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 36 DRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLR 95
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 96 ALHMKEH 102
Score = 95 (38.5 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 27/79 (34%), Positives = 40/79 (50%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ GY M + Y QH + H ++ P RYDM+ + + S T+ +
Sbjct: 153 RMDSYAHMNGWTNGGYGMMQEQLGYPQHPSLNAHNTAQMQPMHRYDMSALQYNSMTNSQT 212
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + + PG
Sbjct: 213 YMNGSPTYSMSYSQQSTPG 231
Score = 73 (30.8 bits), Expect = 6.5e-45, Sum P(3) = 6.5e-45
Identities = 22/50 (44%), Positives = 27/50 (54%)
Query: 357 GDLRHMISMYLP-----EQQEQARLQAMYQQQAGHPP----EG-MPLTHM 396
GDLR MISMYLP +Q Q+RL Q+ P G +PL+HM
Sbjct: 266 GDLRDMISMYLPGAEVQDQSAQSRLHMSQHYQSAPVPGTTINGTIPLSHM 315
>MGI|MGI:98364 [details] [associations]
symbol:Sox2 "SRY-box containing gene 2" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001649 "osteoblast differentiation" evidence=ISO] [GO:0001708
"cell fate specification" evidence=IMP] [GO:0001714 "endodermal
cell fate specification" evidence=ISO] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=ISO;IGI;IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IC;ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007050 "cell cycle arrest" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0010468
"regulation of gene expression" evidence=ISO] [GO:0019827 "stem
cell maintenance" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021984 "adenohypophysis
development" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IGI] [GO:0030539 "male
genitalia development" evidence=IMP] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IDA]
[GO:0030910 "olfactory placode formation" evidence=IGI] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0035019 "somatic stem
cell maintenance" evidence=ISO] [GO:0035198 "miRNA binding"
evidence=ISO] [GO:0042221 "response to chemical stimulus"
evidence=IDA] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0043410 "positive
regulation of MAPK cascade" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0043586
"tongue development" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045165 "cell
fate commitment" evidence=IDA] [GO:0045596 "negative regulation of
cell differentiation" evidence=IMP] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IMP]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IDA] [GO:0045747 "positive regulation of Notch signaling
pathway" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046148 "pigment biosynthetic
process" evidence=IMP] [GO:0048286 "lung alveolus development"
evidence=IDA] [GO:0048568 "embryonic organ development"
evidence=IMP] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=IMP] [GO:0048663 "neuron fate
commitment" evidence=IMP] [GO:0048852 "diencephalon morphogenesis"
evidence=IMP] [GO:0048863 "stem cell differentiation" evidence=IDA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISO] [GO:0050767 "regulation of neurogenesis"
evidence=IGI] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IMP] [GO:0050973
"detection of mechanical stimulus involved in equilibrioception"
evidence=IMP] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IMP] [GO:0060235 "lens induction in camera-type eye"
evidence=IGI] [GO:0060441 "epithelial tube branching involved in
lung morphogenesis" evidence=IDA] [GO:0070848 "response to growth
factor stimulus" evidence=ISO] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO;IDA]
[GO:0097150 "neuronal stem cell maintenance" evidence=IGI]
InterPro:IPR009071 MGI:MGI:98364 Pfam:PF00505 GO:GO:0005737
GO:GO:0021987 GO:GO:0043565 GO:GO:0045944 GO:GO:0045665
GO:GO:0003700 GO:GO:0045747 GO:GO:0006351 GO:GO:0003682
GO:GO:0005667 GO:GO:0030539 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042472 GO:GO:0032526 GO:GO:0048286 GO:GO:0050910
GO:GO:0045666 GO:GO:0090090 GO:GO:0060235 GO:GO:0030858
GO:GO:0001714 GO:GO:0045668 GO:GO:0046148 GO:GO:0021879
GO:GO:0021984 GO:GO:0002052 GO:GO:0048663 GO:GO:0030910
GO:GO:0060441 eggNOG:NOG321816 OrthoDB:EOG4MPHQV GO:GO:0097150
GO:GO:0043586 GO:GO:0060042 GO:GO:0048852 GO:GO:0050973 PDB:1GT0
PDBsum:1GT0 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6657 EMBL:U31967 EMBL:X94127
IPI:IPI00319017 PIR:S10949 RefSeq:NP_035573.3 UniGene:Mm.65396
ProteinModelPortal:P48432 SMR:P48432 DIP:DIP-54522N IntAct:P48432
STRING:P48432 PhosphoSite:P48432 PRIDE:P48432 GeneID:20674
KEGG:mmu:20674 InParanoid:P48432 EvolutionaryTrace:P48432
NextBio:299161 CleanEx:MM_SOX2 Genevestigator:P48432
GermOnline:ENSMUSG00000074637 Uniprot:P48432
Length = 319
Score = 332 (121.9 bits), Expect = 4.4e-44, Sum P(3) = 4.4e-44
Identities = 62/67 (92%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 41 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLR 100
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 101 ALHMKEH 107
Score = 86 (35.3 bits), Expect = 4.4e-44, Sum P(3) = 4.4e-44
Identities = 29/60 (48%), Positives = 33/60 (55%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPPE----G-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+G P G +PL+HM
Sbjct: 260 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHYQSGPVPGTAKYGTLPLSHM 319
Score = 74 (31.1 bits), Expect = 4.4e-44, Sum P(3) = 4.4e-44
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLNS 255
R Y NG+ Y M + Y QH H ++ P RY ++ + + S TS +
Sbjct: 158 RMDSYAHMNGWSNGSYSMMQEQLGYPQHPGLNAHGAAQMQPMHRYVVSALQYNSMTSSQT 217
Query: 256 YMNGS-SYGMYTTATTLPG 273
YMNGS +Y M + PG
Sbjct: 218 YMNGSPTYSMSYSQQGTPG 236
>ZFIN|ZDB-GENE-980526-333 [details] [associations]
symbol:sox3 "SRY-box containing gene 3"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0043049 "otic
placode formation" evidence=IGI;IMP] [GO:0007422 "peripheral
nervous system development" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-333
GO:GO:0005634 GO:GO:0051091 GO:GO:0030182 GO:GO:0003677
GO:GO:0007422 GO:GO:0007417 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 CTD:6658 EMBL:AY316135 EMBL:AB242330
EMBL:AB117960 EMBL:BX088596 EMBL:BC092845 IPI:IPI00551951
RefSeq:NP_001001811.2 UniGene:Dr.104569 ProteinModelPortal:Q6EJB7
SMR:Q6EJB7 STRING:Q6EJB7 Ensembl:ENSDART00000075617 GeneID:30529
KEGG:dre:30529 InParanoid:Q6EJB7 OMA:NNSANDP NextBio:20806912
ArrayExpress:Q6EJB7 Bgee:Q6EJB7 Uniprot:Q6EJB7
Length = 300
Score = 325 (119.5 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 60/67 (89%), Positives = 64/67 (95%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 33 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 92
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 93 AMHMKEH 99
Score = 87 (35.7 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 199 SAARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYPRYDMTGM-HPSSTSLNS 255
S + Y NG+ + Y M D Y QH + + RYDM G+ +P ++ +
Sbjct: 138 SVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMHRYDMAGLQYPMMSTAQT 197
Query: 256 YMNGSS-YGMYTTATT 270
YMN +S Y + A T
Sbjct: 198 YMNAASTYSSMSPAYT 213
Score = 68 (29.0 bits), Expect = 7.9e-43, Sum P(3) = 7.9e-43
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 357 GDLRHMISMYLPEQQEQA--------RLQAMYQ--QQAGHPPEG-MPLTHM 396
GDLR MISMYLP + A RL +++ Q AG G +PLTH+
Sbjct: 250 GDLRDMISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI 300
>UNIPROTKB|P48430 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IEA] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
"response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IEA] [GO:0043586 "tongue
development" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0045668 "negative
regulation of osteoblast differentiation" evidence=IEA] [GO:0045747
"positive regulation of Notch signaling pathway" evidence=IEA]
[GO:0046148 "pigment biosynthetic process" evidence=IEA]
[GO:0048286 "lung alveolus development" evidence=IEA] [GO:0048663
"neuron fate commitment" evidence=IEA] [GO:0048852 "diencephalon
morphogenesis" evidence=IEA] [GO:0050680 "negative regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0050973 "detection of mechanical stimulus
involved in equilibrioception" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0060235 "lens
induction in camera-type eye" evidence=IEA] [GO:0060441 "epithelial
tube branching involved in lung morphogenesis" evidence=IEA]
[GO:0070848 "response to growth factor stimulus" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829 GO:GO:0005634
GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0045665 GO:GO:0003700 GO:GO:0045747
GO:GO:0007050 GO:GO:0006351 GO:GO:0003682 GO:GO:0005667
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0032526 GO:GO:0043410
GO:GO:0090090 GO:GO:0035198 GO:GO:0050680 GO:GO:0070848
GO:GO:0030858 GO:GO:0045668 GO:GO:0046148 GO:GO:0043281
OrthoDB:EOG4MPHQV GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647
KO:K09267 InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663
EMBL:U12532 EMBL:D50603 EMBL:AB092842 IPI:IPI00578945 PIR:I50706
RefSeq:NP_990519.1 UniGene:Gga.601 ProteinModelPortal:P48430
SMR:P48430 STRING:P48430 Ensembl:ENSGALT00000014379 GeneID:396105
KEGG:gga:396105 CTD:6657 InParanoid:P48430 OMA:MSALQYN
NextBio:20816163 ArrayExpress:P48430 Uniprot:P48430
Length = 315
Score = 383 (139.9 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 92/200 (46%), Positives = 106/200 (53%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLR
Sbjct: 37 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLR 96
Query: 141 AVHMKEHXXXXXXXXXXXXXXXXXXXXXXGSGNLIQXXXXXXXXXXXXXXXXXXAQQNSA 200
A+HMKEH G L Q
Sbjct: 97 ALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQ--- 153
Query: 201 ARESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGY-P--RYDMTGM-HPSSTSLN 254
R Y NG+ GY M + Y QH H ++ P RYD++ + + S TS
Sbjct: 154 -RMDSYAHMNGWTNGGYGMMQEQLGYPQHPGLNAHNAAQMQPMHRYDVSALQYNSMTSSQ 212
Query: 255 SYMNGS-SYGMYTTATTLPG 273
+YMNGS +Y M + PG
Sbjct: 213 TYMNGSPTYSMSYSQQGTPG 232
Score = 82 (33.9 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 28/60 (46%), Positives = 32/60 (53%)
Query: 347 SSPNGAPPNAGDLRHMISMYLP--EQQEQA---RLQAMYQQQAGHPP----EG-MPLTHM 396
SS + AP AGDLR MISMYLP E E A RL Q+ P G +PL+HM
Sbjct: 256 SSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQHYQSAPVPGTAINGTLPLSHM 315
>UNIPROTKB|Q9PSV6 [details] [associations]
symbol:Sox3 "SOX3" species:9031 "Gallus gallus" [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0007530 "sex determination"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0021854 "hypothalamus development" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0048515 "spermatid
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000979
GO:GO:0001106 UniGene:Gga.3795 GeneTree:ENSGT00690000101940
HSSP:P48432 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 OMA:AQSYMNV
EMBL:AADN02013475 EMBL:AB011803 EMBL:AB753847 IPI:IPI00820761
RefSeq:NP_989526.1 SMR:Q9PSV6 STRING:Q9PSV6
Ensembl:ENSGALT00000011718 GeneID:374019 KEGG:gga:374019
InParanoid:Q9PSV6 NextBio:20813546 Uniprot:Q9PSV6
Length = 316
Score = 323 (118.8 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 46 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLR 105
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 106 AVHMKEY 112
Score = 78 (32.5 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 23/72 (31%), Positives = 30/72 (41%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYPRYDMTGMH--PSSTSLNSYM 257
R Y NG+ Y M D Y QH + RYDM G+ P ++ +YM
Sbjct: 156 RIDTYAHMNGWTNGAYSLMQDQLGYGQHPGMNSPQLQQMHRYDMPGLQYSPMMSTAQTYM 215
Query: 258 NGSS-YGMYTTA 268
N +S Y M A
Sbjct: 216 NAASTYSMSPAA 227
Score = 74 (31.1 bits), Expect = 2.6e-42, Sum P(3) = 2.6e-42
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLP--------EQQEQARLQAMYQ--QQA 384
+VK E SSP A + GDLR MISMYLP + +RL +++Q Q A
Sbjct: 244 VVKSEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDATDPSALQGSRLHSVHQHYQSA 303
Query: 385 GHPPEG-MPLTHM 396
G G +PLTH+
Sbjct: 304 GTAVNGTVPLTHI 316
Score = 37 (18.1 bits), Expect = 4.9e-38, Sum P(3) = 4.9e-38
Identities = 10/21 (47%), Positives = 11/21 (52%)
Query: 217 YMMDPATYQQHSAYTTHMSSG 237
Y M PA Y Q + T MS G
Sbjct: 221 YSMSPAAYGQQPS--TAMSLG 239
>UNIPROTKB|P48433 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000979
"RNA polymerase II core promoter sequence-specific DNA binding"
evidence=ISS] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISS] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IMP] [GO:0060324
"face development" evidence=ISS] [GO:0007423 "sensory organ
development" evidence=ISS] [GO:0021983 "pituitary gland
development" evidence=ISS] [GO:0021854 "hypothalamus development"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007423 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 UniGene:Gga.3795 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:U12467 IPI:IPI00586970 PIR:I50705
ProteinModelPortal:P48433 SMR:P48433 Uniprot:P48433
Length = 312
Score = 323 (118.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 44 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLR 103
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 104 AVHMKEY 110
Score = 74 (31.1 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 34/100 (34%), Positives = 46/100 (46%)
Query: 319 LHL--VKREYGSPNGLPPNSTDLHLVKREYSSPNGAPPNA---------GDLRHMISMYL 367
LHL V R YG + + V + S P+ APP G+LR MISMYL
Sbjct: 215 LHLQHVPRPYGQQPSTAMSLGSMGSVVK--SEPSSAPPAITSHSQRACLGELRDMISMYL 272
Query: 368 --------PEQQEQARLQAMYQ--QQAGHPPEG-MPLTHM 396
P + +RL +++Q Q AG G +PLTH+
Sbjct: 273 GPGGDATHPSALQGSRLHSVHQHYQSAGTRVNGTVPLTHI 312
Score = 69 (29.3 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 19/61 (31%), Positives = 25/61 (40%)
Query: 202 RESMYQMPNGYMPNGY--MMDPATYQQHSAYTTHMSSGYPRYDMTGMH--PSSTSLNSYM 257
R Y NG+ Y M D Y QH + RYDM G+ P ++ +YM
Sbjct: 152 RIDTYAHMNGWTNGAYSLMQDQLGYGQHPGMNSPQLQQMHRYDMPGLQYSPMMSTAQTYM 211
Query: 258 N 258
N
Sbjct: 212 N 212
>UNIPROTKB|Q5FWM3 [details] [associations]
symbol:sox3-b "Transcription factor Sox-3-B" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0001704
"formation of primary germ layer" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0008013
GO:GO:0001704 HSSP:P48432 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:BC089283 EMBL:X65654 RefSeq:NP_001166875.1
UniGene:Xl.37985 ProteinModelPortal:Q5FWM3 SMR:Q5FWM3 GeneID:398329
KEGG:xla:398329 CTD:398329 Uniprot:Q5FWM3
Length = 307
Score = 321 (118.1 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 59/67 (88%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLR 97
Query: 141 AVHMKEH 147
AVHMK++
Sbjct: 98 AVHMKDY 104
Score = 76 (31.8 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 30/74 (40%), Positives = 39/74 (52%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLP--------EQQEQARLQAMYQ--QQA 384
+VK E SSP A + GDLR MISMYLP + +RL +++Q Q A
Sbjct: 234 VVKSEPSSPPPAITSHTQRACLGDLRDMISMYLPPGGDAGDHSSLQNSRLHSVHQHYQSA 293
Query: 385 GHPP-EG-MPLTHM 396
G P G +PLTH+
Sbjct: 294 GGPGVNGTVPLTHI 307
Score = 45 (20.9 bits), Expect = 7.2e-39, Sum P(3) = 7.2e-39
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 195 AQQNSAARESMYQMPNGYMPNGYMMDPA-TYQQHSAYTTHMSSGYPRYDMTGMHPSS 250
A +S ++ ++ G + MM A TY +A T MS Y + T M +S
Sbjct: 174 AMNSSQMQQIQHRYDMGGLQYSPMMSSAQTYMNAAASTYSMSPAYNQQSSTVMSLAS 230
>UNIPROTKB|Q68FA4 [details] [associations]
symbol:sox3 "Transcription factor Sox-3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0001704 "formation of primary germ layer" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0051091 GO:GO:0030182 GO:GO:0043565
GO:GO:0007422 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 OrthoDB:EOG45MN6C GO:GO:0043049
GO:GO:0001704 HSSP:P48432 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658
EMBL:BC079938 RefSeq:NP_001007502.1 UniGene:Str.27268
ProteinModelPortal:Q68FA4 SMR:Q68FA4 STRING:Q68FA4
Ensembl:ENSXETT00000016558 GeneID:493228 KEGG:xtr:493228
Xenbase:XB-GENE-484815 InParanoid:Q68FA4 OMA:PDPPAHR Bgee:Q68FA4
Uniprot:Q68FA4
Length = 307
Score = 320 (117.7 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 59/67 (88%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+RVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLR 97
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 98 AVHMKEY 104
Score = 78 (32.5 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLP--------EQQEQARLQAMYQQ-QAG 385
+VK E SSP A + GDLR MISMYLP + +RL +++Q Q+
Sbjct: 236 VVKSEPSSPPPAITSHTQRACLGDLRDMISMYLPPGGDASDPSSLQSSRLHSVHQHYQSA 295
Query: 386 HPPEG-MPLTHM 396
P G +PLTH+
Sbjct: 296 AGPNGTVPLTHI 307
Score = 39 (18.8 bits), Expect = 2.4e-38, Sum P(3) = 2.4e-38
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 206 YQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGM 246
Y M G + M TY +A T MS Y + T M
Sbjct: 189 YDM-GGLQYSPMMSSAQTYMNAAASTYSMSPAYNQQSSTVM 228
Score = 37 (18.1 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 204 SMYQMPNGYMPNGYMMDPATYQQ---HSAYTTHMSSGYP 239
SMY +P P G DP++ Q HS + + S+ P
Sbjct: 265 SMY-LP----PGGDASDPSSLQSSRLHSVHQHYQSAAGP 298
>UNIPROTKB|P55863 [details] [associations]
symbol:sox3-a "Transcription factor Sox-3-A" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0001704
"formation of primary germ layer" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=IDA] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090 GO:GO:0008013
GO:GO:0030514 GO:GO:0001704 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 EMBL:AB000825 EMBL:Y07542
EMBL:BC072222 PIR:S22946 RefSeq:NP_001084148.1 UniGene:Xl.22
ProteinModelPortal:P55863 SMR:P55863 GeneID:399335 KEGG:xla:399335
CTD:6658 Xenbase:XB-GENE-484819 Uniprot:P55863
Length = 309
Score = 320 (117.7 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 59/67 (88%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLR
Sbjct: 38 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSDKRPFIDEAKRLR 97
Query: 141 AVHMKEH 147
AVHMK++
Sbjct: 98 AVHMKDY 104
Score = 74 (31.1 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 29/73 (39%), Positives = 37/73 (50%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLPE-------QQEQARLQAM---YQQQA 384
+VK E SSP A + GDLR MISMYLP + +RL ++ YQ A
Sbjct: 237 VVKSEPSSPPPAITSHTQRACLGDLRDMISMYLPPGGDASDPSLQNSRLHSVHQHYQSAA 296
Query: 385 GHPPEG-MPLTHM 396
G G +PLTH+
Sbjct: 297 GPGVNGTVPLTHI 309
Score = 38 (18.4 bits), Expect = 7.8e-38, Sum P(3) = 7.8e-38
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 205 MYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGY---PRYDMTGMHPSSTSLNSYMNGS 260
M Q+ + Y +G +P +AY +S Y P Y+ SST ++ GS
Sbjct: 182 MQQIQHRYDMSGLQYNPMMTSAQNAYMNAAASTYSMSPAYNQQ----SSTVMSLASMGS 236
>UNIPROTKB|E2R800 [details] [associations]
symbol:SOX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 CTD:6658
OMA:AQSYMNV EMBL:AAEX03026974 RefSeq:XP_852934.1
Ensembl:ENSCAFT00000030220 GeneID:492178 KEGG:cfa:492178
NextBio:20864806 Uniprot:E2R800
Length = 444
Score = 315 (115.9 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 137 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 196
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 197 AVHMKEY 203
Score = 72 (30.4 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 30/74 (40%), Positives = 38/74 (51%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQ 383
+VK E SSP A + GDLR MISMYLP + A RL +++Q Q
Sbjct: 371 VVKTEPSSPPPAITSHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHSVHQHYQG 430
Query: 384 AGHPPEG-MPLTHM 396
AG G +PLTH+
Sbjct: 431 AGTAVNGTVPLTHI 444
Score = 45 (20.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 324 REYGSPNGLPPNSTDLHLVKREYSSPNGA-PPNA 356
+EY P T L K +YS P G PP A
Sbjct: 201 KEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGA 234
Score = 40 (19.1 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 202 RESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGS 260
++ Y +P G +P G A +A ++ + G R D + T +N + NG+
Sbjct: 219 KKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQ-RLD------TYTHVNGWANGA 270
>UNIPROTKB|I3LG51 [details] [associations]
symbol:LOC100623770 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0060324 "face development" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048515
"spermatid differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0021854 "hypothalamus
development" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0007530 "sex determination" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0007423 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 GeneTree:ENSGT00690000101940
GO:GO:0007530 KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:PDPPAHR
EMBL:CU856631 RefSeq:XP_003360512.1 Ensembl:ENSSSCT00000024126
GeneID:100623770 KEGG:ssc:100623770 Uniprot:I3LG51
Length = 448
Score = 315 (115.9 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 140 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 199
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 200 AVHMKEY 206
Score = 72 (30.4 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 30/74 (40%), Positives = 38/74 (51%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQ 383
+VK E SSP A + GDLR MISMYLP + A RL +++Q Q
Sbjct: 375 VVKTEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHSVHQHYQG 434
Query: 384 AGHPPEG-MPLTHM 396
AG G +PLTH+
Sbjct: 435 AGTAVNGTVPLTHI 448
Score = 45 (20.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 324 REYGSPNGLPPNSTDLHLVKREYSSPNGA-PPNA 356
+EY P T L K +YS P G PP A
Sbjct: 204 KEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGA 237
Score = 40 (19.1 bits), Expect = 2.6e-37, Sum P(3) = 2.6e-37
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 202 RESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGS 260
++ Y +P G +P G A +A ++ + G R D + T +N + NG+
Sbjct: 222 KKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQ-RLD------TYTHVNGWANGA 273
>MGI|MGI:98365 [details] [associations]
symbol:Sox3 "SRY-box containing gene 3" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007423 "sensory organ development"
evidence=IMP] [GO:0007530 "sex determination" evidence=ISO;IMP]
[GO:0009887 "organ morphogenesis" evidence=IMP] [GO:0021854
"hypothalamus development" evidence=IMP] [GO:0021983 "pituitary
gland development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0048515 "spermatid differentiation"
evidence=IMP] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR009071 MGI:MGI:98365 Pfam:PF00505 GO:GO:0005634
GO:GO:0007423 GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009
GO:GO:0060324 GO:GO:0021983 GO:GO:0000979 GO:GO:0001106
GO:GO:0021854 GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530
HOGENOM:HOG000231647 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:X94125 EMBL:AF434675 EMBL:AB108674
IPI:IPI00986516 PIR:S10948 UniGene:Mm.35784
ProteinModelPortal:P53784 SMR:P53784 STRING:P53784
PhosphoSite:P53784 PRIDE:P53784 InParanoid:Q80XF1 ChiTaRS:SOX3
Bgee:P53784 CleanEx:MM_SOX3 Genevestigator:P53784
GermOnline:ENSMUSG00000045179 Uniprot:P53784
Length = 375
Score = 315 (115.9 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 67 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 126
Query: 141 AVHMKEH 147
AVHMKE+
Sbjct: 127 AVHMKEY 133
Score = 71 (30.1 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 30/74 (40%), Positives = 37/74 (50%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQ 383
+VK E SSP A + GDLR MISMYLP + A RL ++Q Q
Sbjct: 302 VVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQG 361
Query: 384 AGHPPEG-MPLTHM 396
AG G +PLTH+
Sbjct: 362 AGTAVNGTVPLTHI 375
Score = 45 (20.9 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 324 REYGSPNGLPPNSTDLHLVKREYSSPNGA-PPNA 356
+EY P T L K +YS P G PP A
Sbjct: 131 KEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGA 164
Score = 40 (19.1 bits), Expect = 3.3e-37, Sum P(3) = 3.3e-37
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 202 RESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGS 260
++ Y +P G +P G A +A ++ + G R D + T +N + NG+
Sbjct: 149 KKDKYSLPGGLLPPGAAAAAAAAAAAAAASSPVGVGQ-RLD------TYTHVNGWANGA 200
>UNIPROTKB|F1MIK5 [details] [associations]
symbol:SOX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0021521 "ventral spinal cord interneuron specification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001046 GeneTree:ENSGT00690000101940
KO:K09267 InterPro:IPR022097 Pfam:PF12336 OMA:MHRYDMT CTD:6656
EMBL:DAAA02034934 IPI:IPI00693232 RefSeq:XP_002692040.1
RefSeq:XP_875555.1 Ensembl:ENSBTAT00000052847 GeneID:618135
KEGG:bta:618135 NextBio:20901019 Uniprot:F1MIK5
Length = 369
Score = 327 (120.2 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 44 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 103
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 104 ALHMKEH 110
Score = 87 (35.7 bits), Expect = 5.1e-37, Sum P(2) = 5.1e-37
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 347 SSPNGAPPNA--------GDLRHMISMYLPEQQ------EQARLQAM--YQQQAGHPPEG 390
S P+G+PP A GDLR MISMYLP + Q+RL ++ + Q AG G
Sbjct: 303 SEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPPHYQGAGAGANG 362
Query: 391 -MPLTHM 396
+PLTH+
Sbjct: 363 TVPLTHI 369
Score = 37 (18.1 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 207 QMPNGYMPNGYMMDPATYQQ--HSAYTTHMSSG 237
+M + Y+P G DPA Q HS + +G
Sbjct: 325 EMISMYLPAGEGGDPAAAQSRLHSLPPHYQGAG 357
>ZFIN|ZDB-GENE-060322-5 [details] [associations]
symbol:sox1b "SRY-box containing gene 1b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-060322-5 GO:GO:0007275 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 GO:GO:0005667 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GeneTree:ENSGT00690000101940 HOGENOM:HOG000231647 KO:K09267
InterPro:IPR022097 Pfam:PF12336 OrthoDB:EOG40K80Q
HOVERGEN:HBG105663 EMBL:AB242328 EMBL:AL929216 EMBL:BC154495
IPI:IPI00498420 RefSeq:NP_001032751.1 UniGene:Dr.52415
ProteinModelPortal:Q2Z1R2 SMR:Q2Z1R2 STRING:Q2Z1R2 PRIDE:Q2Z1R2
Ensembl:ENSDART00000010894 GeneID:562710 KEGG:dre:562710 CTD:562710
InParanoid:Q2Z1R2 OMA:AMSTTHA NextBio:20884544 Bgee:Q2Z1R2
Uniprot:Q2Z1R2
Length = 340
Score = 330 (121.2 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 61/67 (91%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKL++E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLMSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 95 AMHMKEH 101
Score = 82 (33.9 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
Identities = 29/69 (42%), Positives = 36/69 (52%)
Query: 341 LVKREYS-SP----NGAPPNAGDLRHMISMYLPEQQE-----QARLQAM---YQQQAGHP 387
LVK E S SP + P +GDLR MISMYLP + Q+RL A+ YQ
Sbjct: 272 LVKSEPSVSPPVNAHSRAPCSGDLREMISMYLPTAEAGDPSVQSRLHAVPQHYQSSTTSV 331
Query: 388 PEGMPLTHM 396
+PLTH+
Sbjct: 332 NGTVPLTHI 340
>ZFIN|ZDB-GENE-040718-186 [details] [associations]
symbol:sox1a "SRY-box containing gene 1a"
species:7955 "Danio rerio" [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040718-186
GO:GO:0007275 GO:GO:0051091 GO:GO:0003677 GO:GO:0006351
GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
EMBL:AB242327 EMBL:CR392332 EMBL:BC076326 EMBL:BC096992
IPI:IPI00492442 RefSeq:NP_001002483.1 UniGene:Dr.6453
ProteinModelPortal:Q6DGL6 SMR:Q6DGL6 STRING:Q6DGL6
Ensembl:ENSDART00000102021 GeneID:436756 KEGG:dre:436756 CTD:436756
HOVERGEN:HBG105663 InParanoid:Q6DGL6 OMA:MHRYDMT OrthoDB:EOG40K80R
NextBio:20831193 Bgee:Q6DGL6 Uniprot:Q6DGL6
Length = 336
Score = 327 (120.2 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 95 AMHMKEH 101
Score = 77 (32.2 bits), Expect = 5.7e-36, Sum P(2) = 5.7e-36
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 354 PNAGDLRHMISMYLPEQQE-----QARLQAM---YQQQAGHPPEGMPLTHM 396
P GDLR MISMYLP + Q+RL A+ YQ +PLTH+
Sbjct: 286 PCPGDLREMISMYLPTGESGDPSVQSRLHALPQHYQSTTAGVNGTVPLTHI 336
Score = 40 (19.1 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 207 QMPNGYMPNGYMMDPATYQQHSAYTTHMSS 236
+M + Y+P G DP+ + A H S
Sbjct: 293 EMISMYLPTGESGDPSVQSRLHALPQHYQS 322
>UNIPROTKB|A2TED3 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0051091 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:6656 EMBL:EF192052 EMBL:BC121846 EMBL:BC159121
RefSeq:NP_001074465.1 UniGene:Str.35422 ProteinModelPortal:A2TED3
SMR:A2TED3 STRING:A2TED3 GeneID:779569 KEGG:xtr:779569
Xenbase:XB-GENE-1018269 Uniprot:A2TED3
Length = 401
Score = 327 (120.2 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 94
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 95 ALHMKEH 101
Score = 75 (31.5 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 349 PNGAPPNAGDLRHMISMYLPEQQE 372
P+ PP GDLR MISMYLP E
Sbjct: 333 PHNRPPCPGDLREMISMYLPSGGE 356
Score = 37 (18.1 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 350 NGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAGHPPEGMP 392
NGA P + +M Q ++ Q + GH P P
Sbjct: 177 NGAYPGSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHP 219
>UNIPROTKB|O00570 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002089 "lens
morphogenesis in camera-type eye" evidence=IEA] [GO:0021521
"ventral spinal cord interneuron specification" evidence=IEA]
[GO:0021884 "forebrain neuron development" evidence=IEA]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0006325 "chromatin organization" evidence=NAS]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0006325 GO:GO:0001046 eggNOG:NOG321816
HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 OMA:MHRYDMT CTD:6656 EMBL:Y13436 EMBL:AL138691
IPI:IPI00012162 RefSeq:NP_005977.2 UniGene:Hs.202526
ProteinModelPortal:O00570 SMR:O00570 IntAct:O00570 STRING:O00570
PhosphoSite:O00570 PRIDE:O00570 Ensembl:ENST00000330949 GeneID:6656
KEGG:hsa:6656 UCSC:uc001vsb.1 GeneCards:GC13P112721 HGNC:HGNC:11189
MIM:602148 neXtProt:NX_O00570 PharmGKB:PA36026 InParanoid:O00570
OrthoDB:EOG4DFPQ1 PhylomeDB:O00570 GenomeRNAi:6656 NextBio:25947
Bgee:O00570 CleanEx:HS_SOX1 Genevestigator:O00570
GermOnline:ENSG00000182968 Uniprot:O00570
Length = 391
Score = 327 (120.2 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 49 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 108
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 109 ALHMKEH 115
Score = 75 (31.5 bits), Expect = 9.2e-36, Sum P(2) = 9.2e-36
Identities = 31/75 (41%), Positives = 37/75 (49%)
Query: 341 LVKREYSSPNGAP-----PNAGDLRHMISMYLPEQQ-----------EQARLQAMYQ--Q 382
LVK E S AP P GDLR MISMYLP + Q+RL ++ Q Q
Sbjct: 317 LVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAAAAAAQSRLHSLPQHYQ 376
Query: 383 QAGHPPEG-MPLTHM 396
AG G +PLTH+
Sbjct: 377 GAGAGVNGTVPLTHI 391
>UNIPROTKB|O57401 [details] [associations]
symbol:SOX1 "Transcription factor SOX-1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48432 KO:K09267 InterPro:IPR022097 Pfam:PF12336
HOVERGEN:HBG105663 EMBL:AB011802 IPI:IPI00597708 RefSeq:NP_989664.1
UniGene:Gga.165 ProteinModelPortal:O57401 SMR:O57401 GeneID:374240
KEGG:gga:374240 CTD:6656 NextBio:20813736 Uniprot:O57401
Length = 373
Score = 327 (120.2 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 46 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 105
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 106 ALHMKEH 112
Score = 73 (30.8 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 30/72 (41%), Positives = 37/72 (51%)
Query: 341 LVKREYS-SP----NGAPPNAGDLRHMISMYLPEQQ--------EQARLQAMYQ--QQAG 385
LVK E S SP + P GDLR MISMYLP + Q+RL ++ Q Q A
Sbjct: 302 LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPGGEGGDPAAAAAQSRLHSLPQHYQSAS 361
Query: 386 HPPEG-MPLTHM 396
G +PLTH+
Sbjct: 362 TGVNGTVPLTHI 373
>UNIPROTKB|P41225 [details] [associations]
symbol:SOX3 "Transcription factor SOX-3" species:9606 "Homo
sapiens" [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0048515 "spermatid differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=ISS] [GO:0060324 "face development"
evidence=ISS] [GO:0007423 "sensory organ development" evidence=ISS]
[GO:0021983 "pituitary gland development" evidence=ISS] [GO:0021854
"hypothalamus development" evidence=ISS] [GO:0007530 "sex
determination" evidence=IMP] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007417
"central nervous system development" evidence=TAS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007423
GO:GO:0045665 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
GO:GO:0048515 eggNOG:NOG321816 GO:GO:0007530 Orphanet:3157
Orphanet:90695 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 HOVERGEN:HBG105663 CTD:6658 EMBL:X71135 EMBL:AF264713
EMBL:AL121875 EMBL:BC093863 EMBL:BC093865 EMBL:X65665
IPI:IPI00240510 PIR:I38239 PIR:S22942 RefSeq:NP_005625.2
UniGene:Hs.157429 ProteinModelPortal:P41225 SMR:P41225
STRING:P41225 PhosphoSite:P41225 DMDM:48429228 PRIDE:P41225
Ensembl:ENST00000370536 GeneID:6658 KEGG:hsa:6658 UCSC:uc004fbd.1
GeneCards:GC0XM139585 HGNC:HGNC:11199 MIM:300123 MIM:300833
MIM:312000 MIM:313430 neXtProt:NX_P41225 Orphanet:79495
Orphanet:67045 PharmGKB:PA36036 InParanoid:P41225 OMA:AQSYMNV
PhylomeDB:P41225 GenomeRNAi:6658 NextBio:25955 Bgee:P41225
CleanEx:HS_SOX3 Genevestigator:P41225 GermOnline:ENSG00000134595
Uniprot:P41225
Length = 446
Score = 328 (120.5 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 90/213 (42%), Positives = 100/213 (46%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMA +NPKMHNSEISKRLGA+WKLL + KRPFIDEAKRLR
Sbjct: 137 DRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDEAKRLR 196
Query: 141 AVHMKEHXXXXXXXXXXXXXXXXXXXXXXGSGNLIQXXXXXXXXXXXXXXXXXXAQQNSA 200
AVHMKE+ SG L+ +
Sbjct: 197 AVHMKEYPDYKYRPRRKTKTLLKKDKYSLPSG-LLPPGAAAAAAAAAAAAAAASSPVGVG 255
Query: 201 ARESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYP--------RYDMTGMHPSST- 251
R Y NG+ Y + Q A MSS P RYDM G+ S
Sbjct: 256 QRLDTYTHVNGWANGAYSL--VQEQLGYAQPPSMSSPPPPPALPPMHRYDMAGLQYSPMM 313
Query: 252 --SLNSYMN-------GSSYG-MYTTATTLPGA 274
SYMN S YG M +AT A
Sbjct: 314 PPGAQSYMNVAAAAAAASGYGGMAPSATAAAAA 346
Score = 71 (30.1 bits), Expect = 1.9e-35, Sum P(2) = 1.9e-35
Identities = 30/74 (40%), Positives = 37/74 (50%)
Query: 341 LVKREYSSPNGAPPN------AGDLRHMISMYLPEQQEQA---------RLQAMYQ--QQ 383
+VK E SSP A + GDLR MISMYLP + A RL ++Q Q
Sbjct: 373 VVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPGGRLHGVHQHYQG 432
Query: 384 AGHPPEG-MPLTHM 396
AG G +PLTH+
Sbjct: 433 AGTAVNGTVPLTHI 446
>UNIPROTKB|Q2PG84 [details] [associations]
symbol:sox1 "Transcription factor Sox-1" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007399
"nervous system development" evidence=IMP] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0051091
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:6656 EMBL:AB219572 EMBL:EF672727 EMBL:EF192051
EMBL:BC169643 RefSeq:NP_001089143.1 UniGene:Xl.55964
ProteinModelPortal:Q2PG84 SMR:Q2PG84 GeneID:734174 KEGG:xla:734174
Xenbase:XB-GENE-1018276 Uniprot:Q2PG84
Length = 393
Score = 327 (120.2 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 60/67 (89%), Positives = 65/67 (97%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWK+++E KRPFIDEAKRLR
Sbjct: 32 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLR 91
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 92 ALHMKEH 98
Score = 67 (28.6 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 13/16 (81%), Positives = 13/16 (81%)
Query: 353 PPNAGDLRHMISMYLP 368
PP GDLR MISMYLP
Sbjct: 330 PPCPGDLREMISMYLP 345
Score = 37 (18.1 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 350 NGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAGHPPEGMP 392
NGA P + +M Q ++ Q + GH P P
Sbjct: 177 NGAYPGSVAAAAAAAMMQEAQLAYSQQQQQHPGSGGHHPHHHP 219
>ZFIN|ZDB-GENE-010111-1 [details] [associations]
symbol:sox19b "SRY-box containing gene 19b"
species:7955 "Danio rerio" [GO:0005667 "transcription factor
complex" evidence=IC] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-010111-1
GO:GO:0051091 GO:GO:0005667 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CR848737 IPI:IPI00495401
Ensembl:ENSDART00000058910 ArrayExpress:F1R211 Bgee:F1R211
Uniprot:F1R211
Length = 293
Score = 322 (118.4 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 60/68 (88%), Positives = 65/68 (95%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D+VKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL + KRPFIDEAKRL
Sbjct: 50 MDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRL 109
Query: 140 RAVHMKEH 147
RAVHMKE+
Sbjct: 110 RAVHMKEY 117
Score = 72 (30.4 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 339 LHLVKRE--YSSPNGAPPN-----AGDLRHMISMYLPE-QQEQARLQAMYQQQAGHPPEG 390
+ +VK E SP G P + GDLR MISMY+P ++ Q Y H G
Sbjct: 227 MSMVKPEPLSHSPTGVPNHHRGAFQGDLRDMISMYIPGGDTSESSNQRAYPGVQQHYLGG 286
Query: 391 -MPLTHM 396
+PLTH+
Sbjct: 287 TVPLTHI 293
>ZFIN|ZDB-GENE-980526-102 [details] [associations]
symbol:sox19a "SRY-box containing gene 19a"
species:7955 "Danio rerio" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-980526-102 GO:GO:0051091 GO:GO:0005667
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 EMBL:BX119902 InterPro:IPR022097
Pfam:PF12336 IPI:IPI00931891 Ensembl:ENSDART00000013309
ArrayExpress:E7F9F4 Bgee:E7F9F4 Uniprot:E7F9F4
Length = 314
Score = 320 (117.7 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 59/68 (86%), Positives = 65/68 (95%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D+VKRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL + KRPFIDEAKRL
Sbjct: 48 MDKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRL 107
Query: 140 RAVHMKEH 147
RA+HMKE+
Sbjct: 108 RALHMKEY 115
Score = 63 (27.2 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 348 SPNGAPPNAGDLRHMISMYLP 368
SP P GDLR MISMY+P
Sbjct: 242 SPQPPGPLQGDLRDMISMYIP 262
>FB|FBgn0036411 [details] [associations]
symbol:Sox21a "Sox21a" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0006911 EMBL:AE014296
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
eggNOG:NOG302715 KO:K09267 CTD:30543 EMBL:BT022137
RefSeq:NP_648694.1 UniGene:Dm.24001 SMR:Q9VUD1
EnsemblMetazoa:FBtr0075748 GeneID:39567 KEGG:dme:Dmel_CG7345
UCSC:CG7345-RA FlyBase:FBgn0036411 InParanoid:Q9VUD1 OMA:PWRYLPL
GenomeRNAi:39567 NextBio:814309 Uniprot:Q9VUD1
Length = 388
Score = 328 (120.5 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 61/67 (91%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLL E KRPFIDEAKRLR
Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLR 178
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 179 ALHMKEH 185
Score = 53 (23.7 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 373 QARLQAMYQQQAGHPPEGMPL 393
QARLQAMY HP +PL
Sbjct: 324 QARLQAMYAGSIYHPWRYLPL 344
>WB|WBGene00004949 [details] [associations]
symbol:sox-2 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0009792 GO:GO:0002009 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0040035 eggNOG:NOG321816 GeneTree:ENSGT00690000101940
HSSP:P48432 KO:K09267 EMBL:FO080256 PIR:T16581 RefSeq:NP_741836.1
ProteinModelPortal:Q21305 SMR:Q21305 STRING:Q21305 PaxDb:Q21305
PRIDE:Q21305 EnsemblMetazoa:K08A8.2a.1 EnsemblMetazoa:K08A8.2a.2
GeneID:181002 KEGG:cel:CELE_K08A8.2 UCSC:K08A8.2a.1 CTD:181002
WormBase:K08A8.2a HOGENOM:HOG000020950 InParanoid:Q21305
OMA:AQNIQNA NextBio:911930 ArrayExpress:Q21305 Uniprot:Q21305
Length = 283
Score = 324 (119.1 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 59/67 (88%), Positives = 64/67 (95%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAFMVWSRGQR+KMA +NPKMHNSEISKRLG EWK+L+EQ KRPFIDEAKRLR
Sbjct: 58 DRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLR 117
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 118 AIHMKEH 124
Score = 40 (19.1 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 319 LHLVKREYGSPNGLPPN--STDL---HLVKREYSSPNGAPPNAG 357
+H V + SP+ P+ ST+ +L + SSP G+ G
Sbjct: 197 VHSVPTDNSSPSQFQPSPMSTNFAGSYLTPKSESSPVGSDSTVG 240
>UNIPROTKB|Q9W7R5 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HOVERGEN:HBG105618 InterPro:IPR022097 Pfam:PF12336 EMBL:AB026623
IPI:IPI00574367 ProteinModelPortal:Q9W7R5 SMR:Q9W7R5 STRING:Q9W7R5
Uniprot:Q9W7R5
Length = 280
Score = 324 (119.1 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 60/68 (88%), Positives = 64/68 (94%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 65 RAMHMKEH 72
Score = 38 (18.4 bits), Expect = 1.4e-31, Sum P(2) = 1.4e-31
Identities = 12/55 (21%), Positives = 23/55 (41%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYTTATTLPGAG 275
P + +A ++G P Y + + ++S + S Y ++ PGAG
Sbjct: 151 PQSAAAAAAAAAAAAAGGP-YSLLDLGSKMAEISSSSSAGSALPYASSLGYPGAG 204
>WB|WBGene00004950 [details] [associations]
symbol:sox-3 species:6239 "Caenorhabditis elegans"
[GO:0003690 "double-stranded DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003690
GeneTree:ENSGT00690000101940 EMBL:Z69792 HSSP:P48432
eggNOG:NOG302715 KO:K09267 PIR:T22022 RefSeq:NP_510439.1
UniGene:Cel.1041 ProteinModelPortal:Q20201 SMR:Q20201
EnsemblMetazoa:F40E10.2 GeneID:185534 KEGG:cel:CELE_F40E10.2
UCSC:F40E10.2 CTD:185534 WormBase:F40E10.2 HOGENOM:HOG000018340
InParanoid:Q20201 OMA:KTSYDED NextBio:928610 Uniprot:Q20201
Length = 212
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 62/69 (89%), Positives = 66/69 (95%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
++D VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWK L+EQ KRPFIDEAKR
Sbjct: 44 SLDHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKR 103
Query: 139 LRAVHMKEH 147
LRA+HMKEH
Sbjct: 104 LRALHMKEH 112
>UNIPROTKB|E1BHN5 [details] [associations]
symbol:LOC614121 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 OMA:KPKTLMK EMBL:DAAA02034004
EMBL:DAAA02034005 IPI:IPI00694817 Ensembl:ENSBTAT00000030439
Uniprot:E1BHN5
Length = 204
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 65 RAMHMKEH 72
>UNIPROTKB|Q9Y651 [details] [associations]
symbol:SOX21 "Transcription factor SOX-21" species:9606
"Homo sapiens" [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0043588 "skin development" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0048863 "stem cell
differentiation" evidence=IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=NAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=NAS]
InterPro:IPR009071 EMBL:AF107044 Pfam:PF00505 GO:GO:0005634
GO:GO:0043588 GO:GO:0003677 GO:GO:0048863 GO:GO:0045665
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH471085 GO:GO:0001942 GO:GO:0000981 eggNOG:NOG302715
HOGENOM:HOG000231647 HOVERGEN:HBG105618 KO:K09267
InterPro:IPR022097 Pfam:PF12336 EMBL:AL137061 EMBL:X71136
EMBL:X65666 IPI:IPI00001824 PIR:I38238 PIR:S22937
RefSeq:NP_009015.1 UniGene:Hs.187577 ProteinModelPortal:Q9Y651
SMR:Q9Y651 STRING:Q9Y651 PhosphoSite:Q9Y651 DMDM:6831690
PRIDE:Q9Y651 DNASU:11166 Ensembl:ENST00000376945 GeneID:11166
KEGG:hsa:11166 UCSC:uc001vma.3 CTD:11166 GeneCards:GC13M095361
H-InvDB:HIX0037360 HGNC:HGNC:11197 MIM:604974 neXtProt:NX_Q9Y651
PharmGKB:PA36034 InParanoid:Q9Y651 OMA:KPKTLMK OrthoDB:EOG4S1T8V
PhylomeDB:Q9Y651 GenomeRNAi:11166 NextBio:42483 Bgee:Q9Y651
CleanEx:HS_SOX21 Genevestigator:Q9Y651 GermOnline:ENSG00000125285
Uniprot:Q9Y651
Length = 276
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 65 RAMHMKEH 72
>UNIPROTKB|F2Z520 [details] [associations]
symbol:SOX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043588 GO:GO:0003677 GO:GO:0048863
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
InterPro:IPR022097 Pfam:PF12336 EMBL:CU633813
Ensembl:ENSSSCT00000010410 Uniprot:F2Z520
Length = 416
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 156 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 215
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 216 RAMHMKEH 223
>MGI|MGI:2654070 [details] [associations]
symbol:Sox21 "SRY-box containing gene 21" species:10090 "Mus
musculus" [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0042633 "hair cycle" evidence=IMP] [GO:0043588 "skin
development" evidence=IMP] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISO] [GO:0048863 "stem cell
differentiation" evidence=ISO] InterPro:IPR009071 PROSITE:PS00353
MGI:MGI:2654070 Pfam:PF00505 GO:GO:0005634 GO:GO:0043588
GO:GO:0003677 GO:GO:0048863 GO:GO:0045665 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0001942 GeneTree:ENSGT00690000101940
CleanEx:MM_SOX21 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 InterPro:IPR022097 Pfam:PF12336
CTD:11166 OMA:KPKTLMK EMBL:AY142959 EMBL:AY069926 EMBL:BC069176
EMBL:BC147556 EMBL:BC147565 IPI:IPI00453678 RefSeq:NP_808421.1
UniGene:Mm.70950 ProteinModelPortal:Q811W0 SMR:Q811W0 STRING:Q811W0
PhosphoSite:Q811W0 PRIDE:Q811W0 Ensembl:ENSMUST00000082178
Ensembl:ENSMUST00000170662 GeneID:223227 KEGG:mmu:223227
UCSC:uc007uyt.2 NextBio:376665 Bgee:Q811W0 Genevestigator:Q811W0
GermOnline:ENSMUSG00000061517 Uniprot:Q811W0
Length = 276
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 VDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 65 RAMHMKEH 72
>FB|FBgn0042630 [details] [associations]
symbol:Sox21b "Sox21b" species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0008301 "DNA
binding, bending" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE014296 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101940 OrthoDB:EOG4HHMJQ HSSP:P48432
CTD:406246 EMBL:AY058313 RefSeq:NP_648695.1 UniGene:Dm.955
SMR:Q9VUD3 IntAct:Q9VUD3 MINT:MINT-324417 STRING:Q9VUD3
EnsemblMetazoa:FBtr0075747 EnsemblMetazoa:FBtr0330115 GeneID:39569
KEGG:dme:Dmel_CG32139 UCSC:CG32139-RA FlyBase:FBgn0042630
InParanoid:Q9VUD3 OMA:NEEHIKR GenomeRNAi:39569 NextBio:814314
Uniprot:Q9VUD3
Length = 571
Score = 314 (115.6 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 58/67 (86%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVWSR QRRK+AQDNPKMHNSEISKRLGAEWKLL E+ KRPFIDEAKRLR
Sbjct: 246 EHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLR 305
Query: 141 AVHMKEH 147
A+HMKEH
Sbjct: 306 AMHMKEH 312
Score = 37 (18.1 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 357 GDLRHMISMYLPEQQEQARLQAMYQQ 382
G +H + + +QQ+Q + Q QQ
Sbjct: 441 GAQQHAAAHHQQQQQQQQQQQQQQQQ 466
>UNIPROTKB|A4QNG3 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007399 "nervous system development" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007399
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OMA:LGCPSQH EMBL:AM922298
EMBL:BC135637 RefSeq:NP_001093703.1 UniGene:Str.72434
ProteinModelPortal:A4QNG3 SMR:A4QNG3 STRING:A4QNG3
Ensembl:ENSXETT00000049107 GeneID:100101715 KEGG:xtr:100101715
Xenbase:XB-GENE-485370 Bgee:A4QNG3 Uniprot:A4QNG3
Length = 239
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 59/68 (86%), Positives = 64/68 (94%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRL
Sbjct: 5 VDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRL 64
Query: 140 RAVHMKEH 147
RA HMKEH
Sbjct: 65 RAQHMKEH 72
>UNIPROTKB|B0ZTE2 [details] [associations]
symbol:sox14 "Transcription factor Sox-14" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 KO:K09267 EMBL:EU403425
RefSeq:NP_001165685.1 UniGene:Xl.85736 ProteinModelPortal:B0ZTE2
SMR:B0ZTE2 GeneID:100337614 KEGG:xla:100337614
Xenbase:XB-GENE-6458188 Uniprot:B0ZTE2
Length = 239
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 59/68 (86%), Positives = 64/68 (94%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRL
Sbjct: 5 VDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRL 64
Query: 140 RAVHMKEH 147
RA HMKEH
Sbjct: 65 RAQHMKEH 72
>ZFIN|ZDB-GENE-040429-1 [details] [associations]
symbol:sox21b "SRY-box containing gene 21 b"
species:7955 "Danio rerio" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-040429-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101940 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 KO:K09267 InterPro:IPR022097
Pfam:PF12336 OrthoDB:EOG40K80Q OMA:KPKTLMK EMBL:AY489186
EMBL:CT027987 EMBL:BC095366 IPI:IPI00492387 RefSeq:NP_001009888.1
UniGene:Dr.116538 ProteinModelPortal:Q6RVD7 SMR:Q6RVD7
STRING:Q6RVD7 PRIDE:Q6RVD7 Ensembl:ENSDART00000003310 GeneID:406246
KEGG:dre:406246 CTD:406246 InParanoid:Q6RVD7 NextBio:20817881
Bgee:Q6RVD7 Uniprot:Q6RVD7
Length = 245
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 60/68 (88%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 MDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMKEH
Sbjct: 65 RAMHMKEH 72
>ZFIN|ZDB-GENE-051113-268 [details] [associations]
symbol:sox14 "SRY-box containing gene 14"
species:7955 "Danio rerio" [GO:0021854 "hypothalamus development"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-051113-268 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021854
GeneTree:ENSGT00690000101940 HSSP:P48431 CTD:8403 eggNOG:NOG302715
HOGENOM:HOG000231647 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 EMBL:BC108033 IPI:IPI00511312 RefSeq:NP_001032769.1
UniGene:Dr.52424 ProteinModelPortal:Q32PP9 SMR:Q32PP9 STRING:Q32PP9
Ensembl:ENSDART00000104532 GeneID:557661 KEGG:dre:557661
InParanoid:Q32PP9 OMA:LGCPSQH NextBio:20882094 Bgee:Q32PP9
Uniprot:Q32PP9
Length = 238
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>UNIPROTKB|Q9W7R6 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9031
"Gallus gallus" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AB026622 EMBL:AF193760 EMBL:M86326 IPI:IPI00585113 PIR:I50196
RefSeq:NP_990092.1 UniGene:Gga.286 ProteinModelPortal:Q9W7R6
SMR:Q9W7R6 STRING:Q9W7R6 GeneID:395526 KEGG:gga:395526 CTD:8403
eggNOG:NOG302715 HOGENOM:HOG000231647 HOVERGEN:HBG105618
InParanoid:Q9W7R6 KO:K09267 OrthoDB:EOG47D9H0 NextBio:20815603
InterPro:IPR022097 Pfam:PF12336 Uniprot:Q9W7R6
Length = 240
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>UNIPROTKB|O95416 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007399
"nervous system development" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0007399 EMBL:CH471052 GO:GO:0043565 GO:GO:0006351
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:8403 eggNOG:NOG302715 HOGENOM:HOG000231647
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 InterPro:IPR022097
Pfam:PF12336 OMA:LGCPSQH EMBL:AF107043 EMBL:AJ006230 EMBL:AF193436
EMBL:AK314127 EMBL:BC106729 EMBL:BC106730 EMBL:AF032451
IPI:IPI00030676 RefSeq:NP_004180.1 UniGene:Hs.248184
ProteinModelPortal:O95416 SMR:O95416 STRING:O95416
PhosphoSite:O95416 PRIDE:O95416 Ensembl:ENST00000306087 GeneID:8403
KEGG:hsa:8403 UCSC:uc003erm.2 GeneCards:GC03P137483 HGNC:HGNC:11193
MIM:604747 neXtProt:NX_O95416 PharmGKB:PA36030 InParanoid:O95416
PhylomeDB:O95416 GenomeRNAi:8403 NextBio:31446 Bgee:O95416
CleanEx:HS_SOX14 Genevestigator:O95416 GermOnline:ENSG00000168875
Uniprot:O95416
Length = 240
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>UNIPROTKB|P61259 [details] [associations]
symbol:SOX14 "Transcription factor SOX-14" species:9541
"Macaca fascicularis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0043565 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG105618
InterPro:IPR022097 Pfam:PF12336 EMBL:AB063098
ProteinModelPortal:P61259 SMR:P61259 Uniprot:P61259
Length = 240
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>MGI|MGI:98362 [details] [associations]
symbol:Sox14 "SRY-box containing gene 14" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
MGI:MGI:98362 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:8403 eggNOG:NOG302715
HOVERGEN:HBG105618 KO:K09267 OrthoDB:EOG47D9H0 OMA:LGCPSQH
EMBL:AF193437 EMBL:AF193435 EMBL:AF182357 EMBL:Z18963
IPI:IPI00929882 PIR:S30244 RefSeq:NP_035570.1 UniGene:Mm.261595
UniGene:Mm.484077 ProteinModelPortal:Q04892 SMR:Q04892
STRING:Q04892 PhosphoSite:Q04892 PRIDE:Q04892
Ensembl:ENSMUST00000054819 GeneID:20669 KEGG:mmu:20669
InParanoid:Q04892 NextBio:299141 Bgee:Q04892 CleanEx:MM_SOX14
Genevestigator:Q04892 Uniprot:Q04892
Length = 240
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>RGD|1309654 [details] [associations]
symbol:Sox14 "SRY (sex determining region Y)-box 14"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR009071
Pfam:PF00505 RGD:1309654 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CH473954 CTD:8403
HOVERGEN:HBG105618 KO:K09267 OMA:LGCPSQH EMBL:EU853677
IPI:IPI00870866 RefSeq:NP_001100320.1 UniGene:Rn.141574 SMR:B7SZV3
GeneID:300954 KEGG:rno:300954 UCSC:RGD:1309654 NextBio:647780
Genevestigator:B7SZV3 Uniprot:B7SZV3
Length = 240
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 59/67 (88%), Positives = 63/67 (94%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D +KRPMNAFMVWSRGQRRKMAQ+NPKMHNSEISKRLGAEWKLL+E KRP+IDEAKRLR
Sbjct: 6 DHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLR 65
Query: 141 AVHMKEH 147
A HMKEH
Sbjct: 66 AQHMKEH 72
>UNIPROTKB|B0ZTE1 [details] [associations]
symbol:sox21 "Transcription factor Sox-21" species:8355
"Xenopus laevis" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0007399 "nervous
system development" evidence=IEP] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 KO:K09267 InterPro:IPR022097
Pfam:PF12336 CTD:11166 EMBL:EU403424 RefSeq:NP_001165684.1
UniGene:Xl.85657 ProteinModelPortal:B0ZTE1 SMR:B0ZTE1
GeneID:100337612 KEGG:xla:100337612 Xenbase:XB-GENE-6464309
Uniprot:B0ZTE1
Length = 262
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 59/68 (86%), Positives = 63/68 (92%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMAQ+NPKMHNSEISKRLGAEWKLL E KRPFIDEAKRL
Sbjct: 5 LDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RA+HMK+H
Sbjct: 65 RAMHMKDH 72
>ZFIN|ZDB-GENE-990715-6 [details] [associations]
symbol:sox21a "SRY-box containing gene 21a"
species:7955 "Danio rerio" [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA;ISS;IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;IMP] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-990715-6 GO:GO:0005634 GO:GO:0043565
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009953
GeneTree:ENSGT00690000101940 GO:GO:0001071 HSSP:P48431
eggNOG:NOG302715 HOGENOM:HOG000231647 OrthoDB:EOG40K80Q
EMBL:AF101266 EMBL:U85092 EMBL:AL591389 EMBL:BC056274 EMBL:BC065639
IPI:IPI00506374 RefSeq:NP_571361.1 UniGene:Dr.132865
ProteinModelPortal:Q7SZS1 SMR:Q7SZS1 PRIDE:Q7SZS1
Ensembl:ENSDART00000049339 GeneID:30543 KEGG:dre:30543 CTD:30543
InParanoid:Q9YH21 NextBio:20806923 Bgee:Q7SZS1 Uniprot:Q7SZS1
Length = 239
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 59/68 (86%), Positives = 62/68 (91%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+D VKRPMNAFMVWSR QRRKMA DNPKMHNSEISKRLG EWKLL++ KRPFIDEAKRL
Sbjct: 5 MDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRL 64
Query: 140 RAVHMKEH 147
RAVHMKEH
Sbjct: 65 RAVHMKEH 72
>UNIPROTKB|E2R3H4 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048627
"myoblast development" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:AAEX03003621 RefSeq:XP_003434661.1 ProteinModelPortal:E2R3H4
Ensembl:ENSCAFT00000026387 GeneID:100688349 KEGG:cfa:100688349
Uniprot:E2R3H4
Length = 233
Score = 282 (104.3 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 50/68 (73%), Positives = 61/68 (89%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 106 RARHLRDY 113
Score = 40 (19.1 bits), Expect = 2.2e-27, Sum P(2) = 2.2e-27
Identities = 22/69 (31%), Positives = 25/69 (36%)
Query: 332 LPPNSTDLHLVKREYSSPNGAPPN----AGDLRHMISMYLPEQQEQARLQAMYQQQAGHP 387
LP H K E SSP P + G+L S YLP Y
Sbjct: 173 LPGGYGSSHC-KPEASSPCSLPQSNPRLQGELLPHFSPYLPPGSPTP-----YNAPLSGA 226
Query: 388 PEGMPLTHM 396
P MPLTH+
Sbjct: 227 P--MPLTHL 233
>FB|FBgn0000411 [details] [associations]
symbol:D "Dichaete" species:7227 "Drosophila melanogaster"
[GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=NAS;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0035120 "post-embryonic appendage
morphogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0007442 "hindgut morphogenesis"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003730 "mRNA 3'-UTR
binding" evidence=IDA] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0060810 "intracellular mRNA
localization involved in pattern specification process"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0007420 EMBL:AE014296 GO:GO:0043565
GO:GO:0045944 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0003730 GO:GO:0009950 GO:GO:0002168 GO:GO:0007350
GeneTree:ENSGT00690000101940 EMBL:U68056 EMBL:X96419 EMBL:AY118670
EMBL:BT030105 RefSeq:NP_524066.1 UniGene:Dm.1835
ProteinModelPortal:Q24533 SMR:Q24533 DIP:DIP-21577N
MINT:MINT-800284 STRING:Q24533 PRIDE:Q24533
EnsemblMetazoa:FBtr0075746 EnsemblMetazoa:FBtr0333034
EnsemblMetazoa:FBtr0333035 EnsemblMetazoa:FBtr0333036 GeneID:39570
KEGG:dme:Dmel_CG5893 FlyBase:FBgn0000411 eggNOG:NOG319555
InParanoid:Q24533 OMA:QEGHIKR OrthoDB:EOG4HHMJQ PhylomeDB:Q24533
GenomeRNAi:39570 NextBio:814319 Bgee:Q24533 GermOnline:CG5893
GO:GO:0007442 GO:GO:0060810 GO:GO:0035120 Uniprot:Q24533
Length = 382
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 56/65 (86%), Positives = 61/65 (93%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWSR QRR++A+DNPKMHNSEISKRLGAEWKLL E KRPFIDEAKRLRA+
Sbjct: 142 IKRPMNAFMVWSRLQRRQIAKDNPKMHNSEISKRLGAEWKLLAESEKRPFIDEAKRLRAL 201
Query: 143 HMKEH 147
HMKEH
Sbjct: 202 HMKEH 206
>UNIPROTKB|B4DWU7 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0043403 "skeletal muscle tissue regeneration"
evidence=IEA] [GO:0045843 "negative regulation of striated muscle
tissue development" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048627 "myoblast development" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003682 GO:GO:0045843 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043403 EMBL:AC016876 GO:GO:0048627 IPI:IPI00028451
HGNC:HGNC:11196 HOVERGEN:HBG055512 EMBL:AK301687 SMR:B4DWU7
STRING:B4DWU7 Ensembl:ENST00000570788 Uniprot:B4DWU7
Length = 178
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 50/68 (73%), Positives = 62/68 (91%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL+E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 106 RARHLRDY 113
>UNIPROTKB|O60248 [details] [associations]
symbol:SOX15 "Protein SOX-15" species:9606 "Homo sapiens"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043403 "skeletal muscle tissue
regeneration" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0006325 "chromatin
organization" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008584 "male gonad development" evidence=TAS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0014718 "positive
regulation of satellite cell activation involved in skeletal muscle
regeneration" evidence=ISS] [GO:0045843 "negative regulation of
striated muscle tissue development" evidence=ISS] [GO:0048627
"myoblast development" evidence=ISS] [GO:2000288 "positive
regulation of myoblast proliferation" evidence=ISS] [GO:0030154
"cell differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0070318 "positive regulation of G0 to G1
transition" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 EMBL:CH471108 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0003682 GO:GO:0008584
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006325 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627
CleanEx:HS_SOX12 HOGENOM:HOG000231647 CTD:6665 EMBL:AB006867
EMBL:BC000985 EMBL:BC072003 EMBL:X73039 EMBL:AJ006222 EMBL:AB025355
IPI:IPI00028451 PIR:S34119 RefSeq:NP_008873.1 UniGene:Hs.95582
ProteinModelPortal:O60248 SMR:O60248 STRING:O60248
PhosphoSite:O60248 PRIDE:O60248 DNASU:6665 Ensembl:ENST00000250055
Ensembl:ENST00000538513 GeneID:6665 KEGG:hsa:6665 UCSC:uc002ghy.1
GeneCards:GC17M007491 HGNC:HGNC:11196 MIM:601297 neXtProt:NX_O60248
PharmGKB:PA36033 eggNOG:NOG311451 HOVERGEN:HBG055512
InParanoid:O60248 KO:K09271 OMA:PQSDPRL OrthoDB:EOG40K80Q
PhylomeDB:O60248 GenomeRNAi:6665 NextBio:25987 ArrayExpress:O60248
Bgee:O60248 CleanEx:HS_SOX15 Genevestigator:O60248
GermOnline:ENSG00000129194 Uniprot:O60248
Length = 233
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 50/68 (73%), Positives = 62/68 (91%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL+E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 106 RARHLRDY 113
>UNIPROTKB|E1B9L6 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 CTD:6665 KO:K09271 OMA:PQSDPRL
EMBL:DAAA02048793 IPI:IPI00703496 RefSeq:NP_001179004.1
UniGene:Bt.15965 Ensembl:ENSBTAT00000007184 GeneID:505878
KEGG:bta:505878 NextBio:20867356 Uniprot:E1B9L6
Length = 233
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 50/68 (73%), Positives = 61/68 (89%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 106 RARHLRDY 113
>UNIPROTKB|F1ST29 [details] [associations]
symbol:SOX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048627 "myoblast development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045843 "negative
regulation of striated muscle tissue development" evidence=IEA]
[GO:0043403 "skeletal muscle tissue regeneration" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0003682
GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101940
GO:GO:0043403 GO:GO:0048627 KO:K09271 OMA:PQSDPRL EMBL:CU914279
RefSeq:XP_003131994.1 UniGene:Ssc.61757 Ensembl:ENSSSCT00000019538
GeneID:100522397 KEGG:ssc:100522397 Uniprot:F1ST29
Length = 233
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 50/68 (73%), Positives = 61/68 (89%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL E KRPF++EAKRL
Sbjct: 46 LEKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLGEDEKRPFVEEAKRL 105
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 106 RARHLRDY 113
>MGI|MGI:98363 [details] [associations]
symbol:Sox15 "SRY-box containing gene 15" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IGI;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030154
"cell differentiation" evidence=IGI] [GO:0043403 "skeletal muscle
tissue regeneration" evidence=IMP] [GO:0045843 "negative regulation
of striated muscle tissue development" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0048627 "myoblast development"
evidence=IMP] InterPro:IPR009071 MGI:MGI:98363 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0003682 GO:GO:0045843 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014718
GO:GO:0070318 GO:GO:0043403 GO:GO:2000288 GO:GO:0048627 CTD:6665
eggNOG:NOG311451 HOVERGEN:HBG055512 KO:K09271 OMA:PQSDPRL
OrthoDB:EOG40K80Q EMBL:AB014474 EMBL:AF182945 EMBL:AB039214
EMBL:AB039215 EMBL:AB039216 EMBL:AB039217 EMBL:AB039218
EMBL:AB039219 EMBL:AB039220 EMBL:AB039221 EMBL:AB039222 EMBL:U70443
EMBL:X70909 EMBL:X98369 IPI:IPI00118219 PIR:S33715
RefSeq:NP_033261.1 UniGene:Mm.347499 ProteinModelPortal:P43267
SMR:P43267 MINT:MINT-4788454 STRING:P43267 PhosphoSite:P43267
PRIDE:P43267 Ensembl:ENSMUST00000047373 GeneID:20670 KEGG:mmu:20670
InParanoid:P43267 NextBio:299147 Bgee:P43267 CleanEx:MM_SOX15
Genevestigator:P43267 GermOnline:ENSMUSG00000041287 Uniprot:P43267
Length = 231
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 49/68 (72%), Positives = 62/68 (91%)
Query: 80 IDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRL 139
+++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL ++ KRPF++EAKRL
Sbjct: 44 LEKVKRPMNAFMVWSSVQRRQMAQQNPKMHNSEISKRLGAQWKLLGDEEKRPFVEEAKRL 103
Query: 140 RAVHMKEH 147
RA H++++
Sbjct: 104 RARHLRDY 111
>UNIPROTKB|P48434 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEP] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0071300
GO:GO:0006351 GO:GO:0008584 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001658 GO:GO:0003170
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 OrthoDB:EOG4TXBRZ EMBL:U12533
IPI:IPI00589733 UniGene:Gga.890 ProteinModelPortal:P48434
SMR:P48434 STRING:P48434 InParanoid:P48434 Uniprot:P48434
Length = 494
Score = 229 (85.7 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 106 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 165
Query: 143 HMKEH 147
H K+H
Sbjct: 166 HKKDH 170
Score = 66 (28.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 23/83 (27%), Positives = 31/83 (37%)
Query: 196 QQNSAARESMYQMPNGY-----MPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSS 250
QQ ++ Q GY G+ P T ++ YT H +SG G S
Sbjct: 388 QQQHPEQQQQQQQQLGYGSFNLQHYGFSYPPITRSEYD-YTEHQNSGSYYSHAAGQSGSL 446
Query: 251 TSLNSYMNGSSYGMYTTATTLPG 273
S +YMN + MYT G
Sbjct: 447 YSTFTYMNPTQRPMYTPIADTSG 469
Score = 45 (20.9 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAGH 386
P PP L +RE P P+ + + EQQ+ Q QQQ G+
Sbjct: 349 PPAQPPAQHTLPSTERE-QGPAQQRPHI-KTEQLSPSHNSEQQQHPEQQQQQQQQLGY 404
Score = 40 (19.1 bits), Expect = 1.9e-23, Sum P(3) = 1.9e-23
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 214 PNGYMMDPATYQQHSAYT 231
PNG+ PAT+ Q + Y+
Sbjct: 302 PNGHPGVPATHGQVTTYS 319
>MGI|MGI:98358 [details] [associations]
symbol:Sox10 "SRY-box containing gene 10" species:10090 "Mus
musculus" [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0000980
"RNA polymerase II distal enhancer sequence-specific DNA binding"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IGI]
[GO:0001755 "neural crest cell migration" evidence=IMP] [GO:0002052
"positive regulation of neuroblast proliferation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0007422 "peripheral nervous system development" evidence=IGI]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0014015 "positive regulation of gliogenesis" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0031315 "extrinsic
to mitochondrial outer membrane" evidence=IDA] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA;IMP] [GO:0048469 "cell maturation"
evidence=IGI;IMP] [GO:0048484 "enteric nervous system development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IGI;IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 MGI:MGI:98358
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422
GO:GO:0003682 GO:GO:0003705 GO:GO:0000980 GO:GO:0000978
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048589 GO:GO:0090090 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 GO:GO:0014015 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ
EMBL:AF017182 EMBL:AF047043 EMBL:U66141 EMBL:BC018551 EMBL:BC023356
EMBL:BC025171 EMBL:Z18959 EMBL:U70441 IPI:IPI00929823 PIR:S30242
RefSeq:NP_035567.1 UniGene:Mm.276739 ProteinModelPortal:Q04888
SMR:Q04888 STRING:Q04888 PhosphoSite:Q04888 PaxDb:Q04888
PRIDE:Q04888 Ensembl:ENSMUST00000040019 GeneID:20665 KEGG:mmu:20665
InParanoid:Q04888 ChiTaRS:SOX10 NextBio:299123 Bgee:Q04888
CleanEx:MM_SOX10 CleanEx:MM_SOX21 Genevestigator:Q04888
GermOnline:ENSMUSG00000033006 Uniprot:Q04888
Length = 466
Score = 228 (85.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 104 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 163
Query: 143 HMKEH 147
H K+H
Sbjct: 164 HKKDH 168
Score = 52 (23.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y G S SYM S +YT
Sbjct: 393 PSISRPQFDYSDHQPSG-PYYGHAGQASGLYSAFSYMGPSQRPLYT 437
Score = 46 (21.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 178 RKNGKAAQGEAECPGGEAEQG---GAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQ 234
Query: 252 S 252
S
Sbjct: 235 S 235
Score = 42 (19.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 369 EQQEQARLQAMYQQ---QAGHPPEGMPLT 394
EQ A +QA Y+ HP EG P++
Sbjct: 196 EQGGAAAIQAHYKSAHLDHRHPEEGSPMS 224
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGD 358
P PP VK E + P G PP+ D
Sbjct: 343 PTVSPPGVDAKAQVKTETTGPQG-PPHYTD 371
>UNIPROTKB|P56693 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0048484 "enteric nervous system development" evidence=IEA]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA]
[GO:0048589 "developmental growth" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048863 "stem
cell differentiation" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0048863
GO:GO:0007422 GO:GO:0006357 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003713 GO:GO:0048589
GO:GO:0090090 GO:GO:0009653 GO:GO:0030318 GO:GO:0048709
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546
GO:GO:0048469 EMBL:AL031587 Orphanet:897 GO:GO:0014015 Orphanet:895
CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AJ001183
EMBL:CR456584 EMBL:BT020029 EMBL:BC002824 EMBL:BC007595
IPI:IPI00010781 RefSeq:NP_008872.1 UniGene:Hs.376984
ProteinModelPortal:P56693 SMR:P56693 IntAct:P56693
MINT:MINT-1781695 STRING:P56693 PhosphoSite:P56693 DMDM:6175075
PRIDE:P56693 DNASU:6663 Ensembl:ENST00000360880
Ensembl:ENST00000396884 GeneID:6663 KEGG:hsa:6663 UCSC:uc003aun.1
GeneCards:GC22M038366 HGNC:HGNC:11190 HPA:CAB003171 MIM:602229
MIM:609136 MIM:611584 MIM:613266 neXtProt:NX_P56693 Orphanet:163746
PharmGKB:PA36027 InParanoid:P56693 OMA:YYGHSSQ PhylomeDB:P56693
GenomeRNAi:6663 NextBio:25977 ArrayExpress:P56693 Bgee:P56693
CleanEx:HS_SOX10 Genevestigator:P56693 GermOnline:ENSG00000100146
Uniprot:P56693
Length = 466
Score = 228 (85.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 104 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 163
Query: 143 HMKEH 147
H K+H
Sbjct: 164 HKKDH 168
Score = 53 (23.7 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y +G S SYM S +YT
Sbjct: 393 PSISRPQFDYSDHQPSG-PYYGHSGQASGLYSAFSYMGPSQRPLYT 437
Score = 46 (21.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 178 RKNGKAAQGEAECPGGEAEQG---GTAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQ 234
Query: 252 S 252
S
Sbjct: 235 S 235
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGD 358
P PP VK E + P G PP+ D
Sbjct: 343 PTVSPPGVDAKAQVKTETAGPQG-PPHYTD 371
>UNIPROTKB|F1PHT3 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0048546 "digestive tract
morphogenesis" evidence=IEA] [GO:0048484 "enteric nervous system
development" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0014015
"positive regulation of gliogenesis" evidence=IEA] [GO:0007422
"peripheral nervous system development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002052 "positive regulation of neuroblast
proliferation" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0003682 GO:GO:0003705
GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589 GO:GO:0090090
GO:GO:0030318 GO:GO:0048709 GO:GO:0031315 GO:GO:0048484
GO:GO:0002052 GO:GO:0048546 GO:GO:0048469 GO:GO:0014015 CTD:6663
GeneTree:ENSGT00670000097649 KO:K09270 InterPro:IPR022151
Pfam:PF12444 OMA:YYGHSSQ EMBL:AAEX03007323 RefSeq:XP_538379.3
Ensembl:ENSCAFT00000002231 GeneID:481258 KEGG:cfa:481258
Uniprot:F1PHT3
Length = 468
Score = 228 (85.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 106 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 165
Query: 143 HMKEH 147
H K+H
Sbjct: 166 HKKDH 170
Score = 53 (23.7 bits), Expect = 9.2e-22, Sum P(2) = 9.2e-22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y +G S SYM S +YT
Sbjct: 395 PSISRPQFDYSDHQPSG-PYYGHSGQASGLYSAFSYMGPSQRPLYT 439
Score = 46 (21.3 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 180 RKNGKAAQGESECPGGEAEQG---GAAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQ 236
Query: 252 S 252
S
Sbjct: 237 S 237
Score = 38 (18.4 bits), Expect = 2.0e-23, Sum P(3) = 2.0e-23
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGD 358
P PP VK E + P G PP+ D
Sbjct: 345 PTVSPPGVDAKAQVKTETAGPQG-PPHYTD 373
>UNIPROTKB|F1N6W0 [details] [associations]
symbol:SOX10 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048546 "digestive tract morphogenesis"
evidence=IEA] [GO:0048484 "enteric nervous system development"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0031315 "extrinsic to
mitochondrial outer membrane" evidence=IEA] [GO:0030318 "melanocyte
differentiation" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0001755
"neural crest cell migration" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000980 "RNA polymerase II
distal enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0043066 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:DAAA02014653
EMBL:DAAA02014645 EMBL:DAAA02014646 EMBL:DAAA02014647
EMBL:DAAA02014648 EMBL:DAAA02014649 EMBL:DAAA02014650
EMBL:DAAA02014651 EMBL:DAAA02014652 IPI:IPI00718217
RefSeq:NP_001180176.1 UniGene:Bt.22876 Ensembl:ENSBTAT00000034677
GeneID:353115 KEGG:bta:353115 NextBio:20812699 Uniprot:F1N6W0
Length = 469
Score = 228 (85.3 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 107 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 166
Query: 143 HMKEH 147
H K+H
Sbjct: 167 HKKDH 171
Score = 53 (23.7 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y +G S SYM S +YT
Sbjct: 396 PSISRPQFDYSDHQPSG-PYYGHSGQTSGLYSAFSYMGPSQRPLYT 440
Score = 46 (21.3 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 181 RKNGKAAQGESECPGGEAEQG---GAAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQ 237
Query: 252 S 252
S
Sbjct: 238 S 238
Score = 38 (18.4 bits), Expect = 2.1e-23, Sum P(3) = 2.1e-23
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGD 358
P PP VK E + P G PP+ D
Sbjct: 346 PTVSPPGVDAKAQVKTETAGPQG-PPHYTD 374
>UNIPROTKB|O18896 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0030916 "otic vesicle formation" evidence=ISS] [GO:0001708
"cell fate specification" evidence=ISS] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=ISS]
[GO:0071504 "cellular response to heparin" evidence=ISS]
[GO:0071364 "cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0043491 "protein kinase B signaling cascade"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0003170 "heart valve development" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060784
"regulation of cell proliferation involved in tissue homeostasis"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0003415 "chondrocyte hypertrophy" evidence=ISS]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=ISS] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=ISS] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=ISS] [GO:0045662
"negative regulation of myoblast differentiation" evidence=ISS]
[GO:0042981 "regulation of apoptotic process" evidence=ISS]
[GO:0042127 "regulation of cell proliferation" evidence=ISS]
[GO:0035019 "somatic stem cell maintenance" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0019100 "male germ-line sex
determination" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0035326 "enhancer
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0019933
"cAMP-mediated signaling" evidence=ISS] [GO:0008584 "male gonad
development" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=ISS] [GO:0001501
"skeletal system development" evidence=ISS] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0072034 "renal vesicle
induction" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF029696
RefSeq:NP_999008.1 UniGene:Ssc.16373 ProteinModelPortal:O18896
SMR:O18896 STRING:O18896 GeneID:396840 KEGG:ssc:396840
Uniprot:O18896
Length = 509
Score = 229 (85.7 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 56 (24.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 196 QQNSAAR--ESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSG--YPRYDMTGMHPSST 251
QQ+S + S + +P+ Y P+ Y P T Q+ YT H +SG Y G ST
Sbjct: 411 QQHSPQQIAYSPFNLPH-YSPS-Y--PPITRSQYD-YTDHQNSGSYYSHARSQGSVLYST 465
Query: 252 SLNSYMNGSSYGMYTTATTLPG 273
+YMN + MYT G
Sbjct: 466 F--TYMNPAHGPMYTPIADTSG 485
Score = 45 (20.9 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T GAG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPAGAG 332
Score = 40 (19.1 bits), Expect = 2.4e-23, Sum P(3) = 2.4e-23
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 368 PEQQEQARLQAMYQQQAGHPPEGMPLTH 395
P Q A+ QA QQ PP+ P H
Sbjct: 354 PVPQAPAQPQAALPQQPQAPPQ-QPQAH 380
>UNIPROTKB|O73668 [details] [associations]
symbol:Sox9 "SOX9" species:9031 "Gallus gallus" [GO:0001046
"core promoter sequence-specific DNA binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0001503
"ossification" evidence=IEA] [GO:0001658 "branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0001708 "cell fate
specification" evidence=IEA] [GO:0001837 "epithelial to mesenchymal
transition" evidence=IEA] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IEA] [GO:0001942 "hair follicle
development" evidence=IEA] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003413 "chondrocyte
differentiation involved in endochondral bone morphogenesis"
evidence=IEA] [GO:0003415 "chondrocyte hypertrophy" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004672 "protein
kinase activity" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=IEA] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0010564 "regulation of
cell cycle process" evidence=IEA] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=IEA] [GO:0014032 "neural
crest cell development" evidence=IEA] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=IEA]
[GO:0019100 "male germ-line sex determination" evidence=IEA]
[GO:0019933 "cAMP-mediated signaling" evidence=IEA] [GO:0030155
"regulation of cell adhesion" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0030916 "otic vesicle formation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035622 "intrahepatic bile duct
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=IEA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060784 "regulation of cell proliferation
involved in tissue homeostasis" evidence=IEA] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA] [GO:0070371
"ERK1 and ERK2 cascade" evidence=IEA] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071347
"cellular response to interleukin-1" evidence=IEA] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072190 "ureter urothelium
development" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090103 "cochlea
morphogenesis" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 GO:GO:2000741
GO:GO:0072034 GO:GO:0002683 CTD:6662 UniGene:Gga.890
EMBL:AADN02030063 EMBL:AB012236 IPI:IPI00603266 RefSeq:NP_989612.1
SMR:O73668 STRING:O73668 Ensembl:ENSGALT00000006994 GeneID:374148
KEGG:gga:374148 InParanoid:O73668 NextBio:20813662 Uniprot:O73668
Length = 494
Score = 229 (85.7 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 66 (28.3 bits), Expect = 4.2e-23, Sum P(2) = 4.2e-23
Identities = 24/83 (28%), Positives = 31/83 (37%)
Query: 196 QQNSAARESMYQMPNGY-----MPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSS 250
QQ+S ++ Q GY G P T Q+ YT H +SG G
Sbjct: 389 QQHSPQQQQQQQQQLGYGSFNLQHYGSSYPPITRSQYD-YTEHQNSGSYYSHAAGQSGGL 447
Query: 251 TSLNSYMNGSSYGMYTTATTLPG 273
S +YMN + MYT G
Sbjct: 448 YSTFTYMNPTQRPMYTPIADTSG 470
Score = 44 (20.5 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAGH 386
P PP L + E P P+ + S Y +QQ + Q QQQ G+
Sbjct: 349 PPAQPPAQHTLPALSGE-QGPAQQRPHIKTEQLSPSHYSEQQQHSPQQQQQQQQQLGY 405
Score = 40 (19.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 214 PNGYMMDPATYQQHSAYT 231
PNG+ PAT+ Q + Y+
Sbjct: 302 PNGHPGVPATHGQVTTYS 319
>UNIPROTKB|F1P307 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9031
"Gallus gallus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0001503 "ossification" evidence=IEA] [GO:0001658 "branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0001708
"cell fate specification" evidence=IEA] [GO:0001837 "epithelial to
mesenchymal transition" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA] [GO:0001942
"hair follicle development" evidence=IEA] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=IEA]
[GO:0002683 "negative regulation of immune system process"
evidence=IEA] [GO:0003188 "heart valve formation" evidence=IEA]
[GO:0003203 "endocardial cushion morphogenesis" evidence=IEA]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=IEA] [GO:0003415 "chondrocyte
hypertrophy" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0006334 "nucleosome assembly" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0010564 "regulation of cell cycle process"
evidence=IEA] [GO:0010634 "positive regulation of epithelial cell
migration" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0019100
"male germ-line sex determination" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0030155 "regulation of
cell adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=IEA] [GO:0030879
"mammary gland development" evidence=IEA] [GO:0030903 "notochord
development" evidence=IEA] [GO:0030916 "otic vesicle formation"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0034236 "protein
kinase A catalytic subunit binding" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0035622
"intrahepatic bile duct development" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0043491 "protein kinase B signaling cascade" evidence=IEA]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0060009 "Sertoli cell development"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060221 "retinal
rod cell differentiation" evidence=IEA] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=IEA] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=IEA] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0061036 "positive regulation of cartilage development"
evidence=IEA] [GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071347 "cellular response to interleukin-1"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071504 "cellular response to
heparin" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0072034
"renal vesicle induction" evidence=IEA] [GO:0072190 "ureter
urothelium development" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000020 "positive regulation of male gonad
development" evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0032332 GO:GO:0090090
GO:GO:0071260 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0045732 GO:GO:0050680 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0030502 GO:GO:2000138 GO:GO:0061036 GO:GO:0032331
GO:GO:0045662 GO:GO:2000020 GO:GO:0010564
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0002683 OMA:GAGHVWM
EMBL:AADN02030063 IPI:IPI00818672 Ensembl:ENSGALT00000038513
Uniprot:F1P307
Length = 496
Score = 229 (85.7 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 107 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 166
Query: 143 HMKEH 147
H K+H
Sbjct: 167 HKKDH 171
Score = 66 (28.3 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
Identities = 24/83 (28%), Positives = 31/83 (37%)
Query: 196 QQNSAARESMYQMPNGY-----MPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSS 250
QQ+S ++ Q GY G P T Q+ YT H +SG G
Sbjct: 391 QQHSPQQQQQQQQQLGYGSFNLQHYGSSYPPITRSQYD-YTEHQNSGSYYSHAAGQSGGL 449
Query: 251 TSLNSYMNGSSYGMYTTATTLPG 273
S +YMN + MYT G
Sbjct: 450 YSTFTYMNPTQRPMYTPIADTSG 472
Score = 44 (20.5 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 16/58 (27%), Positives = 22/58 (37%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAGH 386
P PP L + E P P+ + S Y +QQ + Q QQQ G+
Sbjct: 351 PPAQPPAQHTLPALSGE-QGPAQQRPHIKTEQLSPSHYSEQQQHSPQQQQQQQQQLGY 407
Score = 40 (19.1 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 214 PNGYMMDPATYQQHSAYT 231
PNG+ PAT+ Q + Y+
Sbjct: 304 PNGHPGVPATHGQVTTYS 321
>UNIPROTKB|Q7YRJ7 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:0006468 "protein phosphorylation"
evidence=ISS] [GO:0010564 "regulation of cell cycle process"
evidence=ISS] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=ISS] [GO:0003170 "heart valve
development" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0002053 "positive regulation of
mesenchymal cell proliferation" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071260 "cellular response to
mechanical stimulus" evidence=ISS] [GO:0070371 "ERK1 and ERK2
cascade" evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISS] [GO:0010634 "positive regulation
of epithelial cell migration" evidence=ISS] [GO:0070168 "negative
regulation of biomineral tissue development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=ISS] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0090103
"cochlea morphogenesis" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0003415
"chondrocyte hypertrophy" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=ISS] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0042981
"regulation of apoptotic process" evidence=ISS] [GO:0042127
"regulation of cell proliferation" evidence=ISS] [GO:0035019
"somatic stem cell maintenance" evidence=ISS] [GO:0030916 "otic
vesicle formation" evidence=ISS] [GO:0030858 "positive regulation
of epithelial cell differentiation" evidence=ISS] [GO:0019100 "male
germ-line sex determination" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0001708 "cell fate
specification" evidence=ISS] [GO:0001837 "epithelial to mesenchymal
transition" evidence=ISS] [GO:0001942 "hair follicle development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0006461
"protein complex assembly" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0019933 GO:GO:0070371 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0003705 GO:GO:0001077 GO:GO:0006338
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0004672 GO:GO:0071504 GO:GO:0001942 GO:GO:0032332
GO:GO:0030279 GO:GO:0090090 GO:GO:0071260 GO:GO:0035019
GO:GO:0001934 GO:GO:0090190 GO:GO:0071364 GO:GO:0043491
GO:GO:0001502 GO:GO:0001837 GO:GO:0050680 GO:GO:0001158
GO:GO:0030858 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0050679 GO:GO:0002053 GO:GO:0001046
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0090103
GO:GO:0010564 GO:GO:0019100 GO:GO:0003179 GO:GO:0070168
GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 EMBL:AY237827 RefSeq:NP_001002978.1 UniGene:Cfa.175
ProteinModelPortal:Q7YRJ7 SMR:Q7YRJ7 STRING:Q7YRJ7 GeneID:403464
KEGG:cfa:403464 CTD:6662 NextBio:20816981 Uniprot:Q7YRJ7
Length = 513
Score = 229 (85.7 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 68 (29.0 bits), Expect = 3.2e-23, Sum P(2) = 3.2e-23
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 196 QQNSAAR--ESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSL 253
QQ+S + S + +P+ Y P+ Y P T Q+ YT H +SG G S S
Sbjct: 415 QQHSPQQIAYSPFSLPH-YSPS-Y--PPITRSQYD-YTDHQNSGSYYSHAAGQGSSLYST 469
Query: 254 NSYMNGSSYGMYTTATTLPG 273
+YMN + MYT G
Sbjct: 470 FTYMNPAQRPMYTPIADTSG 489
Score = 45 (20.9 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T GAG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPAGAG 332
Score = 38 (18.4 bits), Expect = 4.2e-23, Sum P(3) = 4.2e-23
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQA--GH 386
P PP H + S P A + + EQQ+ + Q Y + +
Sbjct: 373 PQPAPPQPQAAHTLTPLSSEPGQAQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFSLPHY 432
Query: 387 PPEGMPLT 394
P P+T
Sbjct: 433 SPSYPPIT 440
>UNIPROTKB|B7ZR65 [details] [associations]
symbol:sox9-a "Transcription factor Sox-9-A" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0014029 "neural crest formation" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0043049 "otic
placode formation" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0051216 "cartilage development"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0007506 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0051216 GO:GO:0043049 GO:GO:0014029
InterPro:IPR022151 Pfam:PF12444 EMBL:AY035397 EMBL:BC170058
EMBL:BC170060 RefSeq:NP_001084276.1 UniGene:Xl.1690 GeneID:399405
KEGG:xla:399405 CTD:399405 Xenbase:XB-GENE-6253910 Uniprot:B7ZR65
Length = 477
Score = 227 (85.0 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 67 (28.6 bits), Expect = 4.6e-23, Sum P(2) = 4.6e-23
Identities = 19/64 (29%), Positives = 28/64 (43%)
Query: 209 PNGYMPNGYMMDPATYQQHSAYTTHMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSYG 263
P+ Y P S H SS YP +YD T H S++ S+ +G + G
Sbjct: 371 PSHYSDQQQQHSPQQLNYSSFNLQHYSSSYPTITRAQYDYTE-HQGSSTYYSHASGQNSG 429
Query: 264 MYTT 267
+Y+T
Sbjct: 430 LYST 433
Score = 50 (22.7 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 230 YTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYTTATTLPG 273
YT H S +G + S SYMN S +YT G
Sbjct: 410 YTEHQGSSTYYSHASGQNSGLYSTFSYMNPSQRPLYTPIADTTG 453
Score = 45 (20.9 bits), Expect = 9.1e-21, Sum P(2) = 9.1e-21
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 247 HPSSTSLNSYMNGSSYGMYTTATTLPGAG 275
HP S + GS YG+ +T + GAG
Sbjct: 304 HPGVGSTQASYTGS-YGISSTPSATTGAG 331
>UNIPROTKB|Q9BG91 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9483
"Callithrix jacchus" [GO:0001046 "core promoter sequence-specific
DNA binding" evidence=ISS] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISS] [GO:0001501 "skeletal
system development" evidence=ISS] [GO:0001502 "cartilage
condensation" evidence=ISS] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0002683 "negative regulation of immune system
process" evidence=ISS] [GO:0003170 "heart valve development"
evidence=ISS] [GO:0003179 "heart valve morphogenesis" evidence=ISS]
[GO:0003203 "endocardial cushion morphogenesis" evidence=ISS]
[GO:0003413 "chondrocyte differentiation involved in endochondral
bone morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004672 "protein kinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006334 "nucleosome
assembly" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0006468 "protein phosphorylation" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0007173 "epidermal growth
factor receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
EMBL:AF322899 ProteinModelPortal:Q9BG91 SMR:Q9BG91
OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 Uniprot:Q9BG91
Length = 509
Score = 229 (85.7 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 65 (27.9 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 219 MDPATY---QQHS----AYTT----HMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSY 262
+ P+ Y QQHS AY+ H S YP +YD T H +S+S S+ G
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTD-HQNSSSYYSHAAGQGT 460
Query: 263 GMYTTAT 269
G+Y+T T
Sbjct: 461 GLYSTFT 467
Score = 45 (20.9 bits), Expect = 7.7e-21, Sum P(2) = 7.7e-21
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T GAG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPAGAG 332
>UNIPROTKB|P48436 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9606 "Homo
sapiens" [GO:0001503 "ossification" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0003188 "heart valve formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0014032 "neural crest cell
development" evidence=IEA] [GO:0030155 "regulation of cell
adhesion" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030502 "negative regulation of
bone mineralization" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030903 "notochord development"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043491 "protein kinase B signaling cascade"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0060009 "Sertoli cell
development" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060174 "limb bud formation" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072197 "ureter morphogenesis" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEP;IMP] [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0001837 "epithelial to mesenchymal transition"
evidence=ISS] [GO:0001942 "hair follicle development" evidence=ISS]
[GO:0002053 "positive regulation of mesenchymal cell proliferation"
evidence=ISS] [GO:0003203 "endocardial cushion morphogenesis"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0030858 "positive regulation of epithelial cell
differentiation" evidence=ISS] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=ISS] [GO:0035019 "somatic
stem cell maintenance" evidence=ISS] [GO:0042127 "regulation of
cell proliferation" evidence=ISS] [GO:0042981 "regulation of
apoptotic process" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=ISS]
[GO:0050679 "positive regulation of epithelial cell proliferation"
evidence=IEP;ISS] [GO:0050680 "negative regulation of epithelial
cell proliferation" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=ISS] [GO:0060041 "retina development in
camera-type eye" evidence=ISS] [GO:0060221 "retinal rod cell
differentiation" evidence=ISS] [GO:0060517 "epithelial cell
proliferation involved in prostatic bud elongation" evidence=ISS]
[GO:0060784 "regulation of cell proliferation involved in tissue
homeostasis" evidence=ISS] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=ISS] [GO:0072289 "metanephric
nephron tubule formation" evidence=ISS] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001894 "tissue homeostasis" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0030279 "negative regulation of ossification" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0034236 "protein kinase A
catalytic subunit binding" evidence=IPI] [GO:0071347 "cellular
response to interleukin-1" evidence=IEP] [GO:0030850 "prostate
gland development" evidence=IEP] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0007173 "epidermal
growth factor receptor signaling pathway" evidence=ISS] [GO:0070371
"ERK1 and ERK2 cascade" evidence=ISS] [GO:0071260 "cellular
response to mechanical stimulus" evidence=ISS] [GO:0071364
"cellular response to epidermal growth factor stimulus"
evidence=ISS] [GO:0071504 "cellular response to heparin"
evidence=ISS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=IDA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=IDA] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=IMP;IDA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IDA] [GO:0061036 "positive regulation of
cartilage development" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IDA] [GO:0006461 "protein
complex assembly" evidence=IDA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0090184 "positive regulation of kidney
development" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:0035326 "enhancer binding" evidence=IDA] [GO:0019933
"cAMP-mediated signaling" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0003413 "chondrocyte differentiation
involved in endochondral bone morphogenesis" evidence=IMP]
[GO:0071300 "cellular response to retinoic acid" evidence=IEP]
[GO:0010564 "regulation of cell cycle process" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS;IMP] [GO:0003415 "chondrocyte
hypertrophy" evidence=ISS] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0010634
"positive regulation of epithelial cell migration" evidence=IMP]
[GO:0001502 "cartilage condensation" evidence=ISS] [GO:0003179
"heart valve morphogenesis" evidence=ISS] [GO:0030916 "otic vesicle
formation" evidence=ISS] [GO:0051216 "cartilage development"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0090103 "cochlea morphogenesis"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 EMBL:CH471099 GO:GO:0032332
GO:GO:0030279 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0060008
GO:GO:0030916 GO:GO:2000020 GO:GO:0046533 GO:GO:0060174
GO:GO:0030903 GO:GO:0090103 GO:GO:0010564 GO:GO:0019100
GO:GO:0003179 GO:GO:0070168 GO:GO:0060018 GO:GO:0035622
GO:GO:0072190 GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:Z46629
EMBL:S74506 EMBL:S74504 EMBL:S74505 EMBL:BT006875 EMBL:BC007951
EMBL:BC056420 IPI:IPI00009713 PIR:A55204 RefSeq:NP_000337.1
UniGene:Hs.647409 PDB:1S9M PDB:1SX9 PDB:4EUW PDBsum:1S9M
PDBsum:1SX9 PDBsum:4EUW ProteinModelPortal:P48436 SMR:P48436
IntAct:P48436 STRING:P48436 PhosphoSite:P48436 DMDM:1351096
PRIDE:P48436 DNASU:6662 Ensembl:ENST00000245479 GeneID:6662
KEGG:hsa:6662 UCSC:uc002jiw.3 GeneCards:GC17P070117 HGNC:HGNC:11204
HPA:CAB022456 HPA:HPA001758 MIM:114290 MIM:278850 MIM:608160
neXtProt:NX_P48436 Orphanet:140 Orphanet:2138 PharmGKB:PA36041
InParanoid:P48436 OMA:GAGHVWM PhylomeDB:P48436 GenomeRNAi:6662
NextBio:25973 ArrayExpress:P48436 Bgee:P48436 CleanEx:HS_SOX9
Genevestigator:P48436 GermOnline:ENSG00000125398 Uniprot:P48436
Length = 509
Score = 229 (85.7 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 65 (27.9 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 219 MDPATY---QQHS----AYTT----HMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSY 262
+ P+ Y QQHS AY+ H S YP +YD T H +S+S S+ G
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTD-HQNSSSYYSHAAGQGT 460
Query: 263 GMYTTAT 269
G+Y+T T
Sbjct: 461 GLYSTFT 467
Score = 39 (18.8 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T AG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPASAG 332
>UNIPROTKB|P61753 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9544
"Macaca mulatta" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 OrthoDB:EOG4TXBRZ GO:GO:0003415 GO:GO:0060517
GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 CTD:6662 EMBL:AF322900
RefSeq:NP_001028040.1 UniGene:Mmu.3543 ProteinModelPortal:P61753
SMR:P61753 STRING:P61753 PRIDE:P61753 GeneID:574208 KEGG:mcc:574208
InParanoid:P61753 NextBio:19987290 Uniprot:P61753
Length = 509
Score = 229 (85.7 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 65 (27.9 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 219 MDPATY---QQHS----AYTT----HMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSY 262
+ P+ Y QQHS AY+ H S YP +YD T H +S+S S+ G
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTD-HQNSSSYYSHAAGQGT 460
Query: 263 GMYTTAT 269
G+Y+T T
Sbjct: 461 GLYSTFT 467
Score = 39 (18.8 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T AG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPASAG 332
>UNIPROTKB|P61754 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9600
"Pongo pygmaeus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0006461 "protein complex assembly"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISS] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=ISS] [GO:0070168 "negative regulation of biomineral tissue
development" evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade"
evidence=ISS] [GO:0071260 "cellular response to mechanical
stimulus" evidence=ISS] [GO:0071364 "cellular response to epidermal
growth factor stimulus" evidence=ISS] [GO:0071504 "cellular
response to heparin" evidence=ISS] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0090103 "cochlea morphogenesis" evidence=ISS]
[GO:0090184 "positive regulation of kidney development"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:2000020
"positive regulation of male gonad development" evidence=ISS]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0014068 GO:GO:0007283 GO:GO:0003682 GO:GO:0003705
GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504
GO:GO:0001942 GO:GO:0032332 GO:GO:0030279 GO:GO:0090090
GO:GO:0071260 GO:GO:0035019 GO:GO:0001934 GO:GO:0090190
GO:GO:0071364 GO:GO:0043491 GO:GO:0001502 GO:GO:0001837
GO:GO:0050680 GO:GO:0001158 GO:GO:0030858 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0050679
GO:GO:0002053 GO:GO:0001046 GO:GO:0061036 GO:GO:0003203
GO:GO:0032331 GO:GO:0045662 GO:GO:0060008 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0003179 GO:GO:0070168 GO:GO:0072289
eggNOG:NOG295709 HOGENOM:HOG000108876 HOVERGEN:HBG002061
InterPro:IPR022151 Pfam:PF12444 GO:GO:2000741 GO:GO:0072034
GO:GO:0060221 GO:GO:0003415 GO:GO:0060517 GO:GO:0060729
GO:GO:0002683 GO:GO:0060784 EMBL:AF322898 ProteinModelPortal:P61754
SMR:P61754 STRING:P61754 PRIDE:P61754 InParanoid:P61754
Uniprot:P61754
Length = 509
Score = 229 (85.7 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 65 (27.9 bits), Expect = 6.3e-23, Sum P(2) = 6.3e-23
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 219 MDPATY---QQHS----AYTT----HMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSY 262
+ P+ Y QQHS AY+ H S YP +YD T H +S+S S+ G
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTD-HQNSSSYYSHAAGQGT 460
Query: 263 GMYTTAT 269
G+Y+T T
Sbjct: 461 GLYSTFT 467
Score = 39 (18.8 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T AG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPASAG 332
>UNIPROTKB|F1RV30 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9823 "Sus
scrofa" [GO:0035622 "intrahepatic bile duct development"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0034236 "protein kinase A catalytic subunit
binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=IEA] [GO:2000138 "positive regulation of cell
proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0072197 "ureter morphogenesis" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072034 "renal vesicle induction" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0030155 GO:GO:0071560 GO:GO:0019933
GO:GO:0070371 GO:GO:0071300 GO:GO:0030198 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 GO:GO:2000741 GO:GO:0072034 GO:GO:0060221
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 OMA:GAGHVWM EMBL:CU640384 Ensembl:ENSSSCT00000018780
ArrayExpress:F1RV30 Uniprot:F1RV30
Length = 511
Score = 229 (85.7 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 64 (27.6 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 25/80 (31%), Positives = 35/80 (43%)
Query: 196 QQNSAAR--ESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSL 253
QQ+S + S + +P+ Y P+ Y P T Q+ YT H +SG G S
Sbjct: 413 QQHSPQQIAYSPFNLPH-YSPS-Y--PPITRSQYD-YTDHQNSGSYYSHAAGQGSGLYST 467
Query: 254 NSYMNGSSYGMYTTATTLPG 273
+YMN + MYT G
Sbjct: 468 FTYMNPAQRPMYTPIADTSG 487
Score = 45 (20.9 bits), Expect = 7.8e-21, Sum P(2) = 7.8e-21
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T GAG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPAGAG 332
>UNIPROTKB|Q6DFF5 [details] [associations]
symbol:sox9-b "Transcription factor Sox-9-B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0043049 "otic placode formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0051216 "cartilage
development" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0045944
GO:GO:0006351 GO:GO:0019899 GO:GO:0007506 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0051216
GO:GO:0043049 GO:GO:0014029 KO:K09270 InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:AB439583 EMBL:BC076783
RefSeq:NP_001087942.1 UniGene:Xl.28992 ProteinModelPortal:Q6DFF5
SMR:Q6DFF5 GeneID:494585 KEGG:xla:494585 CTD:494585
Xenbase:XB-GENE-1034775 Uniprot:Q6DFF5
Length = 476
Score = 227 (85.0 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 64 (27.6 bits), Expect = 9.3e-23, Sum P(2) = 9.3e-23
Identities = 19/66 (28%), Positives = 27/66 (40%)
Query: 209 PNGYMPNGYMMDPATYQQHSAYTTHMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSYG 263
P+ Y P S H SS YP +YD T H S S ++ +G + G
Sbjct: 370 PSHYSDQQQQHSPQQLNYSSFNLQHYSSSYPTITRAQYDYTE-HQGSNSYYTHASGQNSG 428
Query: 264 MYTTAT 269
+Y+ T
Sbjct: 429 LYSNFT 434
Score = 48 (22.0 bits), Expect = 4.4e-21, Sum P(2) = 4.4e-21
Identities = 14/44 (31%), Positives = 17/44 (38%)
Query: 230 YTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYTTATTLPG 273
YT H S +G + S +YMN S MYT G
Sbjct: 409 YTEHQGSNSYYTHASGQNSGLYSNFTYMNPSQRPMYTPIADTTG 452
Score = 44 (20.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 247 HPSSTSLNSYMNGSSYGMYTTATTLPGAG 275
HP S + GS YG+ +T + GAG
Sbjct: 304 HPGVGSAQAPYTGS-YGISSTPSATTGAG 331
>UNIPROTKB|Q6F2E7 [details] [associations]
symbol:sox9 "Transcription factor Sox-9" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0014029
"neural crest formation" evidence=ISS] [GO:0019899 "enzyme binding"
evidence=ISS] [GO:0043049 "otic placode formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051216
"cartilage development" evidence=IEP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0006351 GO:GO:0019899 GO:GO:0007506
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 GO:GO:0043049 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:6662 EMBL:AC148478
EMBL:CR855424 RefSeq:NP_001016853.1 UniGene:Str.15584
ProteinModelPortal:Q6F2E7 SMR:Q6F2E7 STRING:Q6F2E7 GeneID:549607
KEGG:xtr:549607 Xenbase:XB-GENE-1034769 eggNOG:NOG295090
Uniprot:Q6F2E7
Length = 482
Score = 226 (84.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRIQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 64 (27.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 19/63 (30%), Positives = 26/63 (41%)
Query: 209 PNGYMPNGYMMDPATYQQHSAYTTHMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSYG 263
P+ Y P S H SS YP +YD T H S S S+ +G + G
Sbjct: 376 PSHYSDQQQQHSPQQLNYSSFNLQHYSSSYPTITRAQYDYTE-HQGSNSYYSHASGQNSG 434
Query: 264 MYT 266
+Y+
Sbjct: 435 LYS 437
Score = 52 (23.4 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 247 HPSSTSLNSYMNGSSYGMYTTATTLPGAG 275
HP S + GS YG+ +T + PGAG
Sbjct: 304 HPGVGSTQAPYTGS-YGINSTPSATPGAG 331
Score = 51 (23.0 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 15/44 (34%), Positives = 17/44 (38%)
Query: 230 YTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYTTATTLPG 273
YT H S +G + S SYMN S MYT G
Sbjct: 415 YTEHQGSNSYYSHASGQNSGLYSNFSYMNPSQRPMYTPIADTTG 458
>UNIPROTKB|Q9BG89 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9598 "Pan
troglodytes" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001502 "cartilage condensation" evidence=ISS]
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0001837
"epithelial to mesenchymal transition" evidence=ISS] [GO:0001894
"tissue homeostasis" evidence=ISS] [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISS] [GO:0001942 "hair
follicle development" evidence=ISS] [GO:0002053 "positive
regulation of mesenchymal cell proliferation" evidence=ISS]
[GO:0002683 "negative regulation of immune system process"
evidence=ISS] [GO:0003170 "heart valve development" evidence=ISS]
[GO:0003179 "heart valve morphogenesis" evidence=ISS] [GO:0003203
"endocardial cushion morphogenesis" evidence=ISS] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISS] [GO:0003415 "chondrocyte hypertrophy"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0004672 "protein kinase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0007173 "epidermal growth factor
receptor signaling pathway" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0008284 "positive regulation of
cell proliferation" evidence=ISS] [GO:0010564 "regulation of cell
cycle process" evidence=ISS] [GO:0010634 "positive regulation of
epithelial cell migration" evidence=ISS] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISS]
[GO:0019100 "male germ-line sex determination" evidence=ISS]
[GO:0019933 "cAMP-mediated signaling" evidence=ISS] [GO:0030279
"negative regulation of ossification" evidence=ISS] [GO:0030858
"positive regulation of epithelial cell differentiation"
evidence=ISS] [GO:0030916 "otic vesicle formation" evidence=ISS]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=ISS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISS] [GO:0035019 "somatic stem cell
maintenance" evidence=ISS] [GO:0035326 "enhancer binding"
evidence=ISS] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0042981 "regulation of apoptotic process"
evidence=ISS] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0043491 "protein kinase B signaling cascade" evidence=ISS]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0046533 "negative regulation of photoreceptor cell
differentiation" evidence=ISS] [GO:0050679 "positive regulation of
epithelial cell proliferation" evidence=ISS] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISS]
[GO:0051216 "cartilage development" evidence=ISS] [GO:0060008
"Sertoli cell differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0060517 "epithelial
cell proliferation involved in prostatic bud elongation"
evidence=ISS] [GO:0060729 "intestinal epithelial structure
maintenance" evidence=ISS] [GO:0060784 "regulation of cell
proliferation involved in tissue homeostasis" evidence=ISS]
[GO:0061138 "morphogenesis of a branching epithelium" evidence=ISS]
[GO:0070168 "negative regulation of biomineral tissue development"
evidence=ISS] [GO:0070371 "ERK1 and ERK2 cascade" evidence=ISS]
[GO:0071260 "cellular response to mechanical stimulus"
evidence=ISS] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=ISS] [GO:0071504 "cellular response to
heparin" evidence=ISS] [GO:0072034 "renal vesicle induction"
evidence=ISS] [GO:0072289 "metanephric nephron tubule formation"
evidence=ISS] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISS] [GO:0090103 "cochlea
morphogenesis" evidence=ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISS] [GO:0090190 "positive regulation
of branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000020 "positive regulation of male gonad development"
evidence=ISS] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0001708 GO:GO:0007173 GO:GO:0045892 GO:GO:0043066
GO:GO:0006461 GO:GO:0019933 GO:GO:0070371 GO:GO:0014068
GO:GO:0007283 GO:GO:0003682 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0030279 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0043491 GO:GO:0001502 GO:GO:0001837 GO:GO:0050680
GO:GO:0001158 GO:GO:0030858 GO:GO:0010634 GO:GO:0016585
GO:GO:0006334 GO:GO:0003413 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0003203 GO:GO:0032331 GO:GO:0045662
GO:GO:0060008 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0003179
GO:GO:0070168 GO:GO:0072289 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 EMBL:AF322902 RefSeq:NP_001009029.1
UniGene:Ptr.6522 ProteinModelPortal:Q9BG89 SMR:Q9BG89 STRING:Q9BG89
GeneID:450101 KEGG:ptr:450101 InParanoid:Q9BG89 NextBio:20833065
Uniprot:Q9BG89
Length = 509
Score = 225 (84.3 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+ P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLGDQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 65 (27.9 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 219 MDPATY---QQHS----AYTT----HMSSGYP-----RYDMTGMHPSSTSLNSYMNGSSY 262
+ P+ Y QQHS AY+ H S YP +YD T H +S+S S+ G
Sbjct: 402 LSPSHYSEQQQHSPQQIAYSPFNLPHYSPSYPPITRSQYDYTD-HQNSSSYYSHAAGQGT 460
Query: 263 GMYTTAT 269
G+Y+T T
Sbjct: 461 GLYSTFT 467
Score = 39 (18.8 bits), Expect = 9.0e-20, Sum P(2) = 9.0e-20
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T AG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPASAG 332
>MGI|MGI:98371 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IDA;IMP]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98371 Pfam:PF00505 GO:GO:0001708
GO:GO:0007173 GO:GO:0045892 GO:GO:0043066 GO:GO:0006461
GO:GO:0030155 GO:GO:0071560 GO:GO:0019933 GO:GO:0070371
GO:GO:0071300 GO:GO:0030198 GO:GO:0014068 GO:GO:0007283
GO:GO:0003682 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0006338 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0004672 GO:GO:0071504 GO:GO:0001942
GO:GO:0032332 GO:GO:0060009 GO:GO:0090090 GO:GO:0071260
GO:GO:0035019 GO:GO:0001934 GO:GO:0090190 GO:GO:0071364
GO:GO:0031018 GO:GO:0043491 GO:GO:0014032 GO:GO:0001502
GO:GO:0045732 GO:GO:0001837 GO:GO:0050680 GO:GO:0001503
GO:GO:0001658 GO:GO:0071347 GO:GO:0001158 GO:GO:0030858
GO:GO:0048709 GO:GO:0010634 GO:GO:0016585 GO:GO:0006334
GO:GO:0003413 GO:GO:0030879 GO:GO:0050679 GO:GO:0002053
GO:GO:0001046 GO:GO:0030502 GO:GO:2000138 GO:GO:0061036
GO:GO:0003203 GO:GO:0032331 GO:GO:0045662 GO:GO:0030916
GO:GO:2000020 GO:GO:0046533 GO:GO:0060174 GO:GO:0030903
GO:GO:0090103 GO:GO:0010564 GO:GO:0019100 GO:GO:0060018
GO:GO:0035622 GO:GO:0072190 GO:GO:0072289 GO:GO:0072197
GO:GO:0003188 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 OrthoDB:EOG4TXBRZ
GO:GO:0003415 GO:GO:0060517 GO:GO:0060729 GO:GO:0002683
GO:GO:0060784 CTD:6662 OMA:GAGHVWM EMBL:AF421878 EMBL:AK030187
EMBL:AK049986 EMBL:BC004064 EMBL:BC023796 EMBL:BC023808
EMBL:BC023953 EMBL:BC024958 EMBL:BC034264 EMBL:Z18958
IPI:IPI00131219 PIR:S30243 PIR:S52469 RefSeq:NP_035578.3
UniGene:Mm.286407 ProteinModelPortal:Q04887 SMR:Q04887
IntAct:Q04887 STRING:Q04887 PhosphoSite:Q04887 PRIDE:Q04887
Ensembl:ENSMUST00000000579 GeneID:20682 KEGG:mmu:20682
InParanoid:Q04887 NextBio:299193 Bgee:Q04887 CleanEx:MM_SOX9
Genevestigator:Q04887 GermOnline:ENSMUSG00000000567 Uniprot:Q04887
Length = 507
Score = 229 (85.7 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 59 (25.8 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 196 QQNSAARESM--YQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSL 253
QQ+S + S + +P+ Y P+ Y P T Q+ Y H +SG G S
Sbjct: 409 QQHSPQQISYSPFNLPH-YSPS-Y--PPITRSQYD-YADHQNSGSYYSHAAGQGSGLYST 463
Query: 254 NSYMNGSSYGMYTTATTLPG 273
+YMN + MYT G
Sbjct: 464 FTYMNPAQRPMYTPIADTSG 483
>UNIPROTKB|O42601 [details] [associations]
symbol:sox17b.1 "Transcription factor Sox-17-beta.1"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0008013 GO:GO:0007492 GO:GO:0030178
GO:GO:0007369 HSSP:P48431 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 EMBL:AJ001742 EMBL:BC070615 RefSeq:NP_001081633.1
UniGene:Xl.44 ProteinModelPortal:O42601 SMR:O42601 GeneID:397967
KEGG:xla:397967 CTD:397967 Xenbase:XB-GENE-6252148 Uniprot:O42601
Length = 373
Score = 218 (81.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 57 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLATKRPFVEEAERLRV 116
Query: 142 VHMKEH 147
H++++
Sbjct: 117 QHIQDY 122
Score = 59 (25.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 23/77 (29%), Positives = 29/77 (37%)
Query: 197 QNSAARESMYQMPN-GYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNS 255
Q SA Q+P GY G+ Y+ +S H+S YD +L S
Sbjct: 170 QYSAQNHQQNQLPPAGYF-EGHNSMGYYYRDYSVPNYHISQNSSGYDSPPAQDEYQAL-S 227
Query: 256 YMNGSSYGMYTTATTLP 272
Y SSY Y T P
Sbjct: 228 YSFNSSYMPYQQNATTP 244
>UNIPROTKB|A5A763 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:6663 eggNOG:NOG295709 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH InterPro:IPR022151
Pfam:PF12444 EMBL:AB271933 RefSeq:NP_001093403.1 UniGene:Ssc.27602
ProteinModelPortal:A5A763 SMR:A5A763 STRING:A5A763 GeneID:414903
KEGG:ssc:414903 Uniprot:A5A763
Length = 469
Score = 228 (85.3 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 107 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 166
Query: 143 HMKEH 147
H K+H
Sbjct: 167 HKKDH 171
Score = 53 (23.7 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y +G S SYM S +YT
Sbjct: 396 PSISRPQFDYSDHQPSG-PYYGHSGQTSGLYSAFSYMGPSQRPLYT 440
Score = 46 (21.3 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 181 RKNGKAAQGESECPGGEAEQG---GAAAIQAHYKSAHLDHRHPGEGSPMSDGNPEHPSGQ 237
Query: 252 S 252
S
Sbjct: 238 S 238
>UNIPROTKB|F1PSM5 [details] [associations]
symbol:SOX9 "Transcription factor SOX-9" species:9615
"Canis lupus familiaris" [GO:2000741 "positive regulation of
mesenchymal stem cell differentiation" evidence=IEA] [GO:2000138
"positive regulation of cell proliferation involved in heart
morphogenesis" evidence=IEA] [GO:2000020 "positive regulation of
male gonad development" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0090103 "cochlea morphogenesis" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0072289 "metanephric nephron
tubule formation" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072190 "ureter urothelium development"
evidence=IEA] [GO:0072034 "renal vesicle induction" evidence=IEA]
[GO:0071560 "cellular response to transforming growth factor beta
stimulus" evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0035622 "intrahepatic bile
duct development" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0034236 "protein kinase A catalytic
subunit binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 GO:GO:0032332 GO:GO:0060009
GO:GO:0090090 GO:GO:0071260 GO:GO:0035019 GO:GO:0001934
GO:GO:0090190 GO:GO:0071364 GO:GO:0031018 GO:GO:0043491
GO:GO:0014032 GO:GO:0001502 GO:GO:0045732 GO:GO:0001837
GO:GO:0050680 GO:GO:0001503 GO:GO:0001658 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0048709 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0030879
GO:GO:0050679 GO:GO:0002053 GO:GO:0001046 GO:GO:0030502
GO:GO:2000138 GO:GO:0061036 GO:GO:0003203 GO:GO:0032331
GO:GO:0045662 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0060174 GO:GO:0030903 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0060018 GO:GO:0035622 GO:GO:0072190
GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 GO:GO:0003415
GO:GO:0060517 GO:GO:0060729 GO:GO:0002683 GO:GO:0060784 OMA:GAGHVWM
EMBL:AAEX03006327 Ensembl:ENSCAFT00000007033 Uniprot:F1PSM5
Length = 505
Score = 215 (80.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+ RK+ P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNAFMVWAHAAPRKLPDQYPHLHNAELSKLLGKLWRLLNESEKRPFVEEAERLRVQ 164
Query: 143 HMKEH 147
H K+H
Sbjct: 165 HKKDH 169
Score = 68 (29.0 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 26/80 (32%), Positives = 36/80 (45%)
Query: 196 QQNSAAR--ESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSL 253
QQ+S + S + +P+ Y P+ Y P T Q+ YT H +SG G S S
Sbjct: 407 QQHSPQQIAYSPFSLPH-YSPS-Y--PPITRSQYD-YTDHQNSGSYYSHAAGQGSSLYST 461
Query: 254 NSYMNGSSYGMYTTATTLPG 273
+YMN + MYT G
Sbjct: 462 FTYMNPAQRPMYTPIADTSG 481
Score = 45 (20.9 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 247 HPSSTSLNSYMNGS-SYGMYTTATTLPGAG 275
HP + + + + SYG+ +TA T GAG
Sbjct: 303 HPGVPATHGQVTYTGSYGISSTAATPAGAG 332
Score = 37 (18.1 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 15/68 (22%), Positives = 23/68 (33%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQA--GH 386
P PP H + S P A + + EQQ+ + Q Y + +
Sbjct: 365 PQPAPPQLQAAHTLTPLSSEPGQAQRTHIKTEQLSPSHYSEQQQHSPQQIAYSPFSLPHY 424
Query: 387 PPEGMPLT 394
P P+T
Sbjct: 425 SPSYPPIT 432
>RGD|3735 [details] [associations]
symbol:Sox10 "SRY (sex determining region Y)-box 10" species:10116
"Rattus norvegicus" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific DNA
binding" evidence=IEA;ISO] [GO:0000981 "sequence-specific DNA binding
RNA polymerase II transcription factor activity" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0001755 "neural crest cell migration" evidence=IEA;ISO]
[GO:0002052 "positive regulation of neuroblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007422 "peripheral nervous system
development" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IDA;IPI] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA;ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030318 "melanocyte differentiation"
evidence=IEA;ISO] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0048468 "cell development"
evidence=NAS] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=IEA;ISO]
[GO:0048546 "digestive tract morphogenesis" evidence=IEA;ISO]
[GO:0048589 "developmental growth" evidence=IEA;ISO] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA;ISO] [GO:0048863 "stem
cell differentiation" evidence=IEP] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:3735 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0043066 GO:GO:0003677 GO:GO:0001755
GO:GO:0001701 GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0008134 GO:GO:0030318 GO:GO:0048709 GO:GO:0048468
GO:GO:0031315 GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
GO:GO:0014015 CTD:6663 eggNOG:NOG295709 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270 OrthoDB:EOG41C6WH
InterPro:IPR022151 Pfam:PF12444 OMA:YYGHSSQ EMBL:AJ001029
EMBL:BC062067 IPI:IPI00195985 RefSeq:NP_062066.1 UniGene:Rn.10883
ProteinModelPortal:O55170 SMR:O55170 IntAct:O55170 MINT:MINT-3376332
STRING:O55170 Ensembl:ENSRNOT00000015283 GeneID:29361 KEGG:rno:29361
UCSC:RGD:3735 InParanoid:O55170 NextBio:608888 Genevestigator:O55170
GermOnline:ENSRNOG00000011305 Uniprot:O55170
Length = 466
Score = 228 (85.3 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 104 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 163
Query: 143 HMKEH 147
H K+H
Sbjct: 164 HKKDH 168
Score = 52 (23.4 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 221 PATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
P+ + Y+ H SG P Y G S SYM S +YT
Sbjct: 393 PSISRPQFDYSDHQPSG-PYYGHAGQASGLYSAFSYMGPSQRPLYT 437
Score = 46 (21.3 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 196 QQNSAARESMYQMPNGYMPNGYMMDPATYQQH--SAYTTHM--SSGYPRYDMTGMHPSST 251
++N A + + P G G A Q H SA+ H G P D HPS
Sbjct: 178 RKNGKAAQGEAECPGGETDQG---GAAAIQAHYKSAHLDHRHPEEGSPMSDGNPEHPSGQ 234
Query: 252 S 252
S
Sbjct: 235 S 235
Score = 39 (18.8 bits), Expect = 2.6e-20, Sum P(2) = 2.6e-20
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 369 EQQEQARLQAMYQQ---QAGHPPEGMPLT 394
+Q A +QA Y+ HP EG P++
Sbjct: 196 DQGGAAAIQAHYKSAHLDHRHPEEGSPMS 224
>MGI|MGI:98660 [details] [associations]
symbol:Sry "sex determining region of Chr Y" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007530 "sex determination" evidence=IGI]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=IDA] [GO:0008584 "male gonad
development" evidence=IDA] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030238 "male sex determination" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:2000020 "positive
regulation of male gonad development" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98660 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0016607 GO:GO:0006351
GO:GO:0008584 GO:GO:0000122 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816
GO:GO:0030238 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OrthoDB:EOG49079Z EMBL:X67204 EMBL:U03645 EMBL:X55491
IPI:IPI00113716 PIR:S35565 PIR:S43344 RefSeq:NP_035694.1
UniGene:Mm.377114 ProteinModelPortal:Q05738 SMR:Q05738
MINT:MINT-1367342 STRING:Q05738 PhosphoSite:Q05738 PRIDE:Q05738
Ensembl:ENSMUST00000091178 GeneID:21674 KEGG:mmu:21674
InParanoid:Q05738 NextBio:300962 Bgee:Q05738 CleanEx:MM_SRY
Genevestigator:Q05738 GermOnline:ENSMUSG00000069036
InterPro:IPR027151 PANTHER:PTHR10270:SF84 Uniprot:Q05738
Length = 395
Score = 230 (86.0 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVWSRG+R K+AQ NP M N+EISK+LG WK L E KRPF EA+RL+ +
Sbjct: 5 VKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKIL 64
Query: 143 HMKEH 147
H +++
Sbjct: 65 HREKY 69
Score = 43 (20.2 bits), Expect = 1.8e-21, Sum P(2) = 1.8e-21
Identities = 11/44 (25%), Positives = 17/44 (38%)
Query: 199 SAARESMYQMPNGYMPNGYMMDPATYQQHSAYTTHMSSGYPRYD 242
S ++S Y P +P G++ QQ + H YD
Sbjct: 125 SKNQQSFYWQPVD-IPTGHLQQQQQQQQQQQFHNHHQQQQQFYD 167
>ZFIN|ZDB-GENE-001103-1 [details] [associations]
symbol:sox9a "SRY-box containing gene 9a"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0033339 "pectoral fin development"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
[GO:0048708 "astrocyte differentiation" evidence=IMP] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0043049 "otic
placode formation" evidence=IGI] [GO:0035118 "embryonic pectoral
fin morphogenesis" evidence=IMP] [GO:0030916 "otic vesicle
formation" evidence=IGI] [GO:0060536 "cartilage morphogenesis"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-001103-1
GO:GO:0005737 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048709 GO:GO:0035118 GO:GO:0043049
GO:GO:0060536 GO:GO:0048708 GeneTree:ENSGT00670000097649
HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 OMA:GAGHVWM
EMBL:CU074420 EMBL:AF277096 EMBL:AY090034 EMBL:AY090035
IPI:IPI00507610 RefSeq:NP_571718.1 UniGene:Dr.80814 SMR:Q9DFH2
STRING:Q9DFH2 Ensembl:ENSDART00000005676 GeneID:60641
KEGG:dre:60641 CTD:60641 InParanoid:Q9DFH2 NextBio:20892427
Uniprot:Q9DFH2
Length = 462
Score = 227 (85.0 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 107 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEVEKRPFVEEAERLRVQ 166
Query: 143 HMKEH 147
H K+H
Sbjct: 167 HKKDH 171
Score = 49 (22.3 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 233 HMSSGYP-----RYDMTGMHPS-STSLNSYMNGSSYGMYTT 267
H S+ +P +YD + H ++S ++ G S G+Y+T
Sbjct: 376 HYSTSFPSITRAQYDYSDSHQGGASSYYTHAGGQSSGLYST 416
Score = 42 (19.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 14/45 (31%), Positives = 17/45 (37%)
Query: 223 TYQQHSAYTTHMSSGYPRYDMTGMHPSST-SLNSYMNGSSYGMYT 266
T Q+ +H Y G S S SYM+ S MYT
Sbjct: 385 TRAQYDYSDSHQGGASSYYTHAGGQSSGLYSTFSYMSSSQRPMYT 429
>FB|FBgn0005613 [details] [associations]
symbol:Sox15 "Sox box protein 15" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0022416 "chaeta development" evidence=IGI;IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IGI] InterPro:IPR009071 Pfam:PF00505
EMBL:AE013599 GO:GO:0005634 GO:GO:0043066 GO:GO:0008285
GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0022416
GO:GO:0035220 eggNOG:NOG242943 GeneTree:ENSGT00670000097649
EMBL:AJ250955 EMBL:BT022122 EMBL:BT025204 EMBL:X65668 PIR:S22936
RefSeq:NP_523739.2 UniGene:Dm.2578 ProteinModelPortal:P40657
SMR:P40657 DIP:DIP-21090N MINT:MINT-990874 STRING:P40657
PRIDE:P40657 EnsemblMetazoa:FBtr0087576 GeneID:36575
KEGG:dme:Dmel_CG8404 CTD:6665 FlyBase:FBgn0005613 InParanoid:P40657
OMA:KESRIRR OrthoDB:EOG4MCVFC PhylomeDB:P40657 GenomeRNAi:36575
NextBio:799285 Bgee:P40657 GermOnline:CG8404 Uniprot:P40657
Length = 784
Score = 226 (84.6 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 35/66 (53%), Positives = 55/66 (83%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+K+A +NP +HN+++SK LG +W+ L Q +RP+++EA+RLR
Sbjct: 214 RIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRV 273
Query: 142 VHMKEH 147
+HM EH
Sbjct: 274 IHMTEH 279
Score = 40 (19.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 12 HIPPHHHLSSYGS 24
H PHH L++Y S
Sbjct: 7 HEHPHHLLTNYNS 19
Score = 37 (18.1 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 366 YLPEQQEQARLQAM 379
Y P +++Q++L+AM
Sbjct: 284 YRPRRRKQSKLRAM 297
>UNIPROTKB|I3LMN8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 PANTHER:PTHR10270:SF48
EMBL:FQ311950 Ensembl:ENSSSCT00000030781 Uniprot:I3LMN8
Length = 208
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISK LG +WK+L E KRPF +EA+RL+
Sbjct: 60 DRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRPFFEEAQRLQ 119
Query: 141 AVHMKEH 147
AVH ++
Sbjct: 120 AVHRDKY 126
>UNIPROTKB|P36393 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
CTD:6736 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48 EMBL:U49860
EMBL:Z23070 EMBL:S79625 EMBL:Z26909 PIR:I47151 RefSeq:NP_999617.2
ProteinModelPortal:P36393 SMR:P36393 GeneID:407740 KEGG:ssc:407740
Uniprot:P36393
Length = 208
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISK LG +WK+L E KRPF +EA+RL+
Sbjct: 60 DRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRPFFEEAQRLQ 119
Query: 141 AVHMKEH 147
AVH ++
Sbjct: 120 AVHRDKY 126
>UNIPROTKB|Q5I921 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9823
"Sus scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GeneTree:ENSGT00690000101940 GO:GO:0030238 CTD:6736
HOVERGEN:HBG008712 KO:K09266 OMA:QSYASAM PANTHER:PTHR10270:SF48
EMBL:FP565153 EMBL:AY842532 EMBL:AY842533 EMBL:AY842535
EMBL:GU991615 EMBL:GU143100 EMBL:GU143101 EMBL:GU143102
EMBL:GU143104 EMBL:GU143105 EMBL:GU143106 EMBL:GU143107
EMBL:GU143108 EMBL:GU143123 EMBL:GU143124 EMBL:GU143127
EMBL:GU143128 EMBL:GU143129 EMBL:GU143130 EMBL:GU143131
EMBL:GU143132 EMBL:GU143136 EMBL:GU143137 EMBL:GU143138
EMBL:GU143139 EMBL:GU143143 EMBL:GU143147 EMBL:GU143148
EMBL:GU143152 EMBL:GU143153 EMBL:GU143154 EMBL:GU143155
EMBL:GU143156 EMBL:GU143157 EMBL:GU143158 EMBL:GU143159
EMBL:GU143160 EMBL:GU143161 EMBL:GU143164 EMBL:GU143165
EMBL:GU143168 EMBL:GU143169 EMBL:GU143172 EMBL:GU143173
EMBL:GU143178 EMBL:GU143186 EMBL:GU143187 EMBL:GU143188
EMBL:GU143189 EMBL:GU143190 EMBL:GU143191 EMBL:GU143196
EMBL:GU143198 EMBL:GU143199 EMBL:GU143200 EMBL:GU143202
EMBL:GU143204 EMBL:GU143205 EMBL:GU143206 EMBL:GU143207
EMBL:GU143210 EMBL:GU143211 EMBL:GU143212 EMBL:GU143213
EMBL:GU143220 EMBL:GU143221 EMBL:GU143223 EMBL:GU143224
EMBL:GU143229 EMBL:GU143230 EMBL:GU143232 EMBL:GU143233
EMBL:GU143234 EMBL:GU143235 EMBL:GU143236 EMBL:GU143237
EMBL:GU143241 EMBL:GU143242 EMBL:GU143243 EMBL:GU143244
EMBL:GU143246 EMBL:GU143249 RefSeq:XP_003360585.1 SMR:Q5I921
Ensembl:ENSSSCT00000027478 GeneID:100625818 KEGG:ssc:100625818
Uniprot:Q5I921
Length = 236
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRK+A +NP+M NSEISK LG +WK+L E KRPF +EA+RL+
Sbjct: 60 DRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKWLGCKWKMLTEAEKRPFFEEAQRLQ 119
Query: 141 AVHMKEH 147
AVH ++
Sbjct: 120 AVHRDKY 126
>UNIPROTKB|I3LU29 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060828 "regulation of canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OMA:ECPALEA EMBL:CT737360 RefSeq:XP_003359100.1
Ensembl:ENSSSCT00000023754 GeneID:100155811 KEGG:ssc:100155811
Uniprot:I3LU29
Length = 389
Score = 216 (81.1 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L KRP++DEA+RLR
Sbjct: 44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRL 103
Query: 142 VHMKEH 147
HM+++
Sbjct: 104 QHMQDY 109
Score = 48 (22.0 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 17/62 (27%), Positives = 24/62 (38%)
Query: 326 YGSPNGLPPNSTDLHLVKREYSSPNGAPPNAGDLRHMISMYLPEQQEQARLQAMYQQQAG 385
Y SP PP ++LH + S P P L + + L E ++ Y G
Sbjct: 284 YYSPATYPPLHSNLHAHLGQLSPPP-EHPGFDALDQLSQVELLEDMDRNEFD-QYLNTPG 341
Query: 386 HP 387
HP
Sbjct: 342 HP 343
>WB|WBGene00004771 [details] [associations]
symbol:sem-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:FO080144 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 HSSP:P35710 RefSeq:NP_740846.1
ProteinModelPortal:Q8T3B9 SMR:Q8T3B9 EnsemblMetazoa:C32E12.5.1
EnsemblMetazoa:C32E12.5.2 GeneID:172162 KEGG:cel:CELE_C32E12.5
UCSC:C32E12.5.1 CTD:172162 WormBase:C32E12.5 HOGENOM:HOG000019701
InParanoid:Q8T3B9 OMA:PSEFGHA NextBio:874275 Uniprot:Q8T3B9
Length = 404
Score = 219 (82.2 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 37/67 (55%), Positives = 53/67 (79%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVWS+ +RRK+ + P MHN+EISK+LG+ W+ L ++ K PF+ EA+RLR
Sbjct: 91 NHIKRPMNAFMVWSQMERRKICEHQPDMHNAEISKQLGSRWRSLTDEEKAPFVAEAERLR 150
Query: 141 AVHMKEH 147
HM+E+
Sbjct: 151 VCHMQEY 157
Score = 45 (20.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 16/48 (33%), Positives = 20/48 (41%)
Query: 224 YQQHSAYTTHMSSGYPR------YDMTGMHPSSTSLNSYMNGSSYGMY 265
+QQH A H S+G P DM GM P NS ++ Y
Sbjct: 273 HQQHFASQHHNSAGSPLRMTNLGMDM-GMPPQMMGHNSGFGAGNHPFY 319
>UNIPROTKB|A4IIJ8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0014029 "neural crest
formation" evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
[GO:0030318 "melanocyte differentiation" evidence=ISS] [GO:0032183
"SUMO binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0001755 GO:GO:0006351 GO:GO:0019899
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0010628 GO:GO:0014044 GO:GO:0030318 GO:GO:0048709
GO:GO:0050768 GO:GO:0048484 GO:GO:0048840 GO:GO:0048752
GO:GO:0032183 GO:GO:0071600 GO:GO:0014029 CTD:6663 eggNOG:NOG295709
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876 KO:K09270
OrthoDB:EOG41C6WH InterPro:IPR022151 Pfam:PF12444 EMBL:BC136047
RefSeq:NP_001093691.1 UniGene:Str.9225 ProteinModelPortal:A4IIJ8
SMR:A4IIJ8 STRING:A4IIJ8 Ensembl:ENSXETT00000013902
GeneID:100101700 KEGG:xtr:100101700 Xenbase:XB-GENE-480304
OMA:STSHYTE Bgee:A4IIJ8 Uniprot:A4IIJ8
Length = 436
Score = 228 (85.3 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 90 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRMQ 149
Query: 143 HMKEH 147
H K+H
Sbjct: 150 HKKDH 154
Score = 37 (18.1 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 220 DPATYQQHSAYTTHMSSGYPRYD-MTGMHPSSTSLNSYMNGS 260
D A +Q S+Y +H S Y + M P L + ++ S
Sbjct: 372 DYADHQPSSSYYSHSSQASSLYSAFSYMGPPQRPLYTAISDS 413
>ZFIN|ZDB-GENE-040426-1274 [details] [associations]
symbol:sox4b "SRY-box containing gene 4b"
species:7955 "Danio rerio" [GO:0031018 "endocrine pancreas
development" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-040426-1274 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0031018 HOVERGEN:HBG005040
InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
EMBL:AY369082 IPI:IPI00510524 UniGene:Dr.151812
ProteinModelPortal:Q6UJB6 SMR:Q6UJB6 STRING:Q6UJB6
InParanoid:Q6UJB6 ArrayExpress:Q6UJB6 Uniprot:Q6UJB6
Length = 342
Score = 217 (81.4 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 41/69 (59%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+R
Sbjct: 51 ASGHIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAER 110
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 111 LRLKHMADY 119
Score = 39 (18.8 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 323 KREYGSPNGLPPNSTDLHLVKREYSSP 349
KR G P+ P D H + + ++P
Sbjct: 150 KRSAGKPHKKEPGPADHHSLYKAKAAP 176
>UNIPROTKB|F5H3H1 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01013243 ProteinModelPortal:F5H3H1 SMR:F5H3H1
Ensembl:ENST00000534739 ArrayExpress:F5H3H1 Bgee:F5H3H1
Uniprot:F5H3H1
Length = 165
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRKMA +NP+M NSEISK+LG +WK+L E K PF EA++L+
Sbjct: 58 DRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQ 117
Query: 141 AVHMKEH 147
A+H +++
Sbjct: 118 AMHREKY 124
>UNIPROTKB|F5H6J8 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR009071
InterPro:IPR017253 PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0043231
GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548 GO:GO:0030238
PANTHER:PTHR10270:SF48 HGNC:HGNC:11311 EMBL:AC006040
IPI:IPI01012788 ProteinModelPortal:F5H6J8 SMR:F5H6J8
Ensembl:ENST00000525526 ArrayExpress:F5H6J8 Bgee:F5H6J8
Uniprot:F5H6J8
Length = 197
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRKMA +NP+M NSEISK+LG +WK+L E K PF EA++L+
Sbjct: 58 DRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQ 117
Query: 141 AVHMKEH 147
A+H +++
Sbjct: 118 AMHREKY 124
>UNIPROTKB|Q05066 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9606
"Homo sapiens" [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IDA;NAS] [GO:0030238 "male sex determination"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:2000020 "positive
regulation of male gonad development" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR009071 InterPro:IPR017253
PIRSF:PIRSF037653 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0030154 GO:GO:0003677 GO:GO:0016607
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0007548 Pathway_Interaction_DB:ar_tf_pathway
Orphanet:242 GO:GO:2000020 GO:GO:0030238 Orphanet:251510 PDB:2GZK
PDBsum:2GZK eggNOG:NOG130659 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OMA:QSYASAM PANTHER:PTHR10270:SF48 EMBL:X53772 EMBL:L10101
EMBL:L10102 EMBL:L08063 EMBL:X96421 EMBL:S53156 EMBL:S56543
EMBL:BC074923 EMBL:BC074924 IPI:IPI00011568 PIR:A47533
RefSeq:NP_003131.1 UniGene:Hs.1992 PDB:1HRY PDB:1HRZ PDB:1J46
PDB:1J47 PDBsum:1HRY PDBsum:1HRZ PDBsum:1J46 PDBsum:1J47
ProteinModelPortal:Q05066 SMR:Q05066 IntAct:Q05066
MINT:MINT-1367278 STRING:Q05066 PhosphoSite:Q05066 DMDM:548983
PRIDE:Q05066 DNASU:6736 Ensembl:ENST00000383070 GeneID:6736
KEGG:hsa:6736 UCSC:uc004fqg.1 GeneCards:GC0YM002698 HGNC:HGNC:11311
HPA:HPA003959 MIM:400044 MIM:400045 MIM:480000 neXtProt:NX_Q05066
Orphanet:1772 Orphanet:393 Orphanet:983 PharmGKB:PA36135
HOGENOM:HOG000008601 InParanoid:Q05066 OrthoDB:EOG49079Z
PhylomeDB:Q05066 EvolutionaryTrace:Q05066 GenomeRNAi:6736
NextBio:26276 ArrayExpress:Q05066 Bgee:Q05066 CleanEx:HS_SRY
Genevestigator:Q05066 GermOnline:ENSG00000184895 Uniprot:Q05066
Length = 204
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
DRVKRPMNAF+VWSR QRRKMA +NP+M NSEISK+LG +WK+L E K PF EA++L+
Sbjct: 58 DRVKRPMNAFIVWSRDQRRKMALENPRMRNSEISKQLGYQWKMLTEAEKWPFFQEAQKLQ 117
Query: 141 AVHMKEH 147
A+H +++
Sbjct: 118 AMHREKY 124
>UNIPROTKB|P48435 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090263
EMBL:U12534 IPI:IPI00602181 PIR:I50707 RefSeq:NP_990518.1
UniGene:Gga.32193 ProteinModelPortal:P48435 SMR:P48435
GeneID:396104 KEGG:gga:396104 CTD:6664 HOVERGEN:HBG005040 KO:K09268
NextBio:20816162 InterPro:IPR017386 PIRSF:PIRSF038098
Uniprot:P48435
Length = 396
Score = 219 (82.2 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 45 ASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 104
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 105 LRLKHMADY 113
Score = 42 (19.8 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 11/26 (42%), Positives = 11/26 (42%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPP 354
P GL P S LHL G PP
Sbjct: 294 PAGLSPASVPLHLHLVGRQRGGGRPP 319
>UNIPROTKB|E2RH58 [details] [associations]
symbol:SOX12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0065004 "protein-DNA complex
assembly" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0032993 "protein-DNA complex" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 CTD:6666 OMA:VQQRGAR EMBL:AAEX03013862
RefSeq:XP_542944.2 Ensembl:ENSCAFT00000011182 GeneID:485820
KEGG:cfa:485820 NextBio:20859729 Uniprot:E2RH58
Length = 321
Score = 209 (78.6 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ P MHN+EISKRLG W+LL + K PF+ EA+RLR
Sbjct: 40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLK 99
Query: 143 HMKEH 147
HM ++
Sbjct: 100 HMADY 104
Score = 42 (19.8 bits), Expect = 7.1e-20, Sum P(2) = 7.1e-20
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 332 LPPNSTDLHLVKREYSSPNGAPPNAGDLR 360
LPP S H +Y +P AGD R
Sbjct: 282 LPPPSGTSHFEFPDYCTPEVTEMIAGDWR 310
>UNIPROTKB|Q9XT60 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9615
"Canis lupus familiaris" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005737 GO:GO:0030154 GO:GO:0003677
GO:GO:0016607 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 PANTHER:PTHR10270:SF48
EMBL:AF107021 ProteinModelPortal:Q9XT60 SMR:Q9XT60 Uniprot:Q9XT60
Length = 220
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 42/67 (62%), Positives = 57/67 (85%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+RV+RPMNAF+VWSR QRRKMA +NP+M NSEISK+LG +WK+L E K PF +EA+RL+
Sbjct: 51 NRVRRPMNAFLVWSRDQRRKMALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQ 110
Query: 141 AVHMKEH 147
A+H +++
Sbjct: 111 AMHREKY 117
>RGD|3759 [details] [associations]
symbol:Sry "sex determining region Y" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007530 "sex determination" evidence=ISO]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008301 "DNA
binding, bending" evidence=ISO] [GO:0008584 "male gonad development"
evidence=ISO] [GO:0010629 "negative regulation of gene expression"
evidence=ISO] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=ISO;IEP]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IDA] [GO:2000020 "positive regulation of male
gonad development" evidence=ISO] InterPro:IPR009071 Pfam:PF00505
RGD:3759 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154 GO:GO:0016607
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007548
GO:GO:0030238 HOVERGEN:HBG008712 InterPro:IPR027151
PANTHER:PTHR10270:SF84 EMBL:X89730 EMBL:AJ222688 EMBL:Z26907
IPI:IPI00551785 PIR:S58088 ProteinModelPortal:P36394 SMR:P36394
PRIDE:P36394 Genevestigator:P36394 Uniprot:P36394
Length = 121
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 42/66 (63%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
+VKRPMNAFMVWSRG+R K+AQ NP M NSEISK+LG +WK L E KRPF EA+RL+
Sbjct: 4 QVKRPMNAFMVWSRGERHKLAQQNPSMQNSEISKQLGYQWKSLTEAEKRPFFQEAQRLKT 63
Query: 142 VHMKEH 147
+H +++
Sbjct: 64 LHREKY 69
>UNIPROTKB|O15370 [details] [associations]
symbol:SOX12 "Transcription factor SOX-12" species:9606
"Homo sapiens" [GO:0032993 "protein-DNA complex" evidence=IEA]
[GO:0065004 "protein-DNA complex assembly" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0045165 "cell fate commitment" evidence=IEP]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0021510 "spinal cord development" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0021510 GO:GO:0000976 GO:GO:0001105 GO:GO:0045165
GO:GO:0032993 EMBL:AL034548 GO:GO:0065004 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
EMBL:U35612 EMBL:BC067361 IPI:IPI00006180 RefSeq:NP_008874.2
UniGene:Hs.43627 UniGene:Hs.712815 ProteinModelPortal:O15370
SMR:O15370 IntAct:O15370 STRING:O15370 PhosphoSite:O15370
PaxDb:O15370 PRIDE:O15370 Ensembl:ENST00000342665
Ensembl:ENST00000544632 GeneID:6666 KEGG:hsa:6666 UCSC:uc002wdh.3
CTD:6666 GeneCards:GC20P000306 HGNC:HGNC:11198 MIM:601947
neXtProt:NX_O15370 PharmGKB:PA36035 eggNOG:NOG290369
HOVERGEN:HBG094895 InParanoid:O15370 OMA:VQQRGAR OrthoDB:EOG41VK47
PhylomeDB:O15370 GenomeRNAi:6666 NextBio:25991 Bgee:O15370
CleanEx:HS_SOX12 Genevestigator:O15370 Uniprot:O15370
Length = 315
Score = 209 (78.6 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ P MHN+EISKRLG W+LL + K PF+ EA+RLR
Sbjct: 40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLK 99
Query: 143 HMKEH 147
HM ++
Sbjct: 100 HMADY 104
Score = 40 (19.1 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 329 PNGLPPNSTDLHLVKREYSSPNGAPPNAGDLR 360
P+ PP+ T H +Y +P AGD R
Sbjct: 274 PDLQPPSGTS-HFEFPDYCTPEVTEMIAGDWR 304
>ZFIN|ZDB-GENE-001103-2 [details] [associations]
symbol:sox9b "SRY-box containing gene 9b"
species:7955 "Danio rerio" [GO:0048839 "inner ear development"
evidence=IGI;IMP] [GO:0043049 "otic placode formation"
evidence=IGI;IMP] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0035118
"embryonic pectoral fin morphogenesis" evidence=IMP] [GO:0030318
"melanocyte differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IGI] [GO:0050935 "iridophore
differentiation" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-001103-2 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060041 GO:GO:0051216
GO:GO:0031016 GO:GO:0030318 GO:GO:0035118 GO:GO:0043049
GO:GO:0050935 GeneTree:ENSGT00670000097649 InterPro:IPR022151
Pfam:PF12444 EMBL:CU855796 IPI:IPI00994467
Ensembl:ENSDART00000124464 ArrayExpress:F1QDZ3 Bgee:F1QDZ3
Uniprot:F1QDZ3
Length = 408
Score = 218 (81.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEW-KLLNEQAKRPFIDEAKRLRA 141
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W +LLNE KRPF++EA+RLR
Sbjct: 91 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWSRLLNEGEKRPFVEEAERLRV 150
Query: 142 VHMKEH 147
H K+H
Sbjct: 151 QHKKDH 156
Score = 37 (18.1 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 345 EYSSPNGAPPNAG 357
+Y P+GAP AG
Sbjct: 282 QYLPPHGAPGPAG 294
>MGI|MGI:1890761 [details] [associations]
symbol:Sox16 "SRY-box containing gene 16" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
MGI:MGI:1890761 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
UniGene:Mm.347499 GermOnline:ENSMUSG00000041287 EMBL:L29084
IPI:IPI00123384 ProteinModelPortal:Q62247 SMR:Q62247 STRING:Q62247
InParanoid:Q62247 Genevestigator:Q62247 Uniprot:Q62247
Length = 57
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 41/57 (71%), Positives = 51/57 (89%)
Query: 91 MVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MVWS QRR+MAQ NPKMHNSEISKRLGA+WKLL+++ KRPF++EAKRLRA H+ ++
Sbjct: 1 MVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDDEEKRPFVEEAKRLRARHLHDY 57
>UNIPROTKB|Q03255 [details] [associations]
symbol:SRY "Sex-determining region Y protein" species:9913
"Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:2000020 "positive regulation of male
gonad development" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007548 "sex
differentiation" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
InterPro:IPR009071 InterPro:IPR017253 PIRSF:PIRSF037653
Pfam:PF00505 GO:GO:0005737 GO:GO:0007423 GO:GO:0016607
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0009887 GO:GO:0060009 GO:GO:0060324
GO:GO:0021983 GO:GO:0000979 GO:GO:0001106 GO:GO:0021854
GO:GO:0048515 GeneTree:ENSGT00690000101940 GO:GO:2000020
GO:GO:0030238 EMBL:Z30327 EMBL:U15569 EMBL:AB039748 EMBL:DQ336526
EMBL:EU233320 EMBL:EU294189 EMBL:Z18808 EMBL:S71489 IPI:IPI00716700
PIR:S34113 RefSeq:NP_001014407.1 UniGene:Bt.90486
ProteinModelPortal:Q03255 SMR:Q03255 Ensembl:ENSBTAT00000062957
GeneID:280931 KEGG:bta:280931 CTD:6736 HOVERGEN:HBG008712 KO:K09266
OMA:QSYASAM NextBio:20805048 PANTHER:PTHR10270:SF48 Uniprot:Q03255
Length = 229
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 42/67 (62%), Positives = 54/67 (80%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D VKRPMNAF+VWSR +RRK+A +NPKM NS+ISK+LG EWK L + KRPF +EA+RL
Sbjct: 52 DHVKRPMNAFIVWSRERRRKVALENPKMKNSDISKQLGYEWKRLTDAEKRPFFEEAQRLL 111
Query: 141 AVHMKEH 147
A+H ++
Sbjct: 112 AIHRDKY 118
>RGD|620474 [details] [associations]
symbol:Sox9 "SRY-box containing gene 9" species:10116 "Rattus
norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001077
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in positive
regulation of transcription" evidence=ISO;IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0001501
"skeletal system development" evidence=ISO] [GO:0001502 "cartilage
condensation" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IMP] [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IMP;IDA] [GO:0001942 "hair follicle development"
evidence=IMP] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IMP] [GO:0002063 "chondrocyte development"
evidence=IMP] [GO:0002683 "negative regulation of immune system
process" evidence=IMP] [GO:0003170 "heart valve development"
evidence=IMP] [GO:0003179 "heart valve morphogenesis" evidence=IMP]
[GO:0003188 "heart valve formation" evidence=IMP] [GO:0003203
"endocardial cushion morphogenesis" evidence=IMP] [GO:0003413
"chondrocyte differentiation involved in endochondral bone
morphogenesis" evidence=ISO] [GO:0003415 "chondrocyte hypertrophy"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISO;IMP;IDA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISO;IDA]
[GO:0004672 "protein kinase activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=ISO] [GO:0007165 "signal transduction" evidence=IMP]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0007507 "heart development" evidence=IMP] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0008584 "male gonad development" evidence=ISO;IGI;IMP]
[GO:0010564 "regulation of cell cycle process" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=IGI]
[GO:0010634 "positive regulation of epithelial cell migration"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=IMP] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019100
"male germ-line sex determination" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0030155 "regulation of cell
adhesion" evidence=IMP] [GO:0030198 "extracellular matrix
organization" evidence=IMP] [GO:0030238 "male sex determination"
evidence=IGI] [GO:0030279 "negative regulation of ossification"
evidence=IMP] [GO:0030502 "negative regulation of bone
mineralization" evidence=IMP] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IMP] [GO:0030916 "otic
vesicle formation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO;IMP;IDA]
[GO:0034236 "protein kinase A catalytic subunit binding"
evidence=ISO] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035326 "enhancer binding" evidence=ISO;IDA]
[GO:0035622 "intrahepatic bile duct development" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO;IMP] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043491 "protein kinase B signaling cascade" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045165 "cell fate commitment" evidence=IGI]
[GO:0045595 "regulation of cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IMP;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;IMP;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048709
"oligodendrocyte differentiation" evidence=IMP] [GO:0050679
"positive regulation of epithelial cell proliferation"
evidence=IMP] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IMP] [GO:0051216 "cartilage development"
evidence=IEP;IMP;TAS] [GO:0060008 "Sertoli cell differentiation"
evidence=IMP] [GO:0060009 "Sertoli cell development" evidence=IGI]
[GO:0060018 "astrocyte fate commitment" evidence=IGI] [GO:0060041
"retina development in camera-type eye" evidence=IGI] [GO:0060221
"retinal rod cell differentiation" evidence=IGI] [GO:0060350
"endochondral bone morphogenesis" evidence=IMP] [GO:0060512
"prostate gland morphogenesis" evidence=IMP] [GO:0060517
"epithelial cell proliferation involved in prostatic bud
elongation" evidence=IMP] [GO:0060729 "intestinal epithelial
structure maintenance" evidence=IMP] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO;IDA] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=IGI] [GO:0070168 "negative regulation of
biomineral tissue development" evidence=IMP] [GO:0070371 "ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=IDA] [GO:0071364 "cellular response to
epidermal growth factor stimulus" evidence=IDA] [GO:0071504
"cellular response to heparin" evidence=IDA] [GO:0071560 "cellular
response to transforming growth factor beta stimulus" evidence=ISO]
[GO:0072034 "renal vesicle induction" evidence=IMP] [GO:0072197
"ureter morphogenesis" evidence=IGI] [GO:0072289 "metanephric
nephron tubule formation" evidence=IGI] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] [GO:0090103 "cochlea morphogenesis" evidence=IMP]
[GO:0090184 "positive regulation of kidney development"
evidence=IGI] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IMP] [GO:2000020
"positive regulation of male gonad development" evidence=ISO]
[GO:2000138 "positive regulation of cell proliferation involved in
heart morphogenesis" evidence=IMP] [GO:2000741 "positive regulation
of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 Pfam:PF00505 RGD:620474 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0051216 InterPro:IPR022151 Pfam:PF12444 HSSP:P48432
IPI:IPI00392284 EMBL:AB073720 UniGene:Rn.95086
ProteinModelPortal:Q91WY3 STRING:Q91WY3 HOVERGEN:HBG098066
Genevestigator:Q91WY3 Uniprot:Q91WY3
Length = 164
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPF++EA+RLR
Sbjct: 90 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQ 149
Query: 143 HMKEH 147
H K+H
Sbjct: 150 HRKDH 154
>UNIPROTKB|A6PVD3 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9606
"Homo sapiens" [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IEA]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0002052 "positive regulation of
neuroblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0030318 "melanocyte differentiation" evidence=IEA] [GO:0031315
"extrinsic to mitochondrial outer membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0048863 "stem cell differentiation" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0048863 GO:GO:0007422 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0048709 GO:GO:0031315
GO:GO:0048484 GO:GO:0002052 GO:GO:0048546 GO:GO:0048469
EMBL:AL031587 GO:GO:0014015 HOVERGEN:HBG002061 InterPro:IPR022151
Pfam:PF12444 UniGene:Hs.376984 HGNC:HGNC:11190 IPI:IPI00908479
SMR:A6PVD3 STRING:A6PVD3 Ensembl:ENST00000427770 UCSC:uc010gxj.3
HOGENOM:HOG000070122 Uniprot:A6PVD3
Length = 213
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 104 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 163
Query: 143 HMKEH 147
H K+H
Sbjct: 164 HKKDH 168
>UNIPROTKB|Q90ZH9 [details] [associations]
symbol:sox17a-b "Transcription factor Sox-17-alpha-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007442 "hindgut morphogenesis" evidence=IMP] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007494 "midgut
development" evidence=IMP] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 GO:GO:0007494
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007442 HSSP:P48431
KO:K04495 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
EMBL:AB052691 EMBL:BC060350 RefSeq:NP_001083136.1 UniGene:Xl.11957
ProteinModelPortal:Q90ZH9 SMR:Q90ZH9 GeneID:398765 KEGG:xla:398765
CTD:398765 Xenbase:XB-GENE-6255435 Uniprot:Q90ZH9
Length = 377
Score = 229 (85.7 bits), Expect = 7.9e-19, P = 7.9e-19
Identities = 37/66 (56%), Positives = 54/66 (81%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L+ KRPF++EA+RLR
Sbjct: 57 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLRV 116
Query: 142 VHMKEH 147
HM++H
Sbjct: 117 QHMQDH 122
>UNIPROTKB|Q8AWH3 [details] [associations]
symbol:sox17a "Transcription factor Sox-17-alpha"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007492 "endoderm development" evidence=ISS]
[GO:0008013 "beta-catenin binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0008013
GO:GO:0007492 GO:GO:0007369 GO:GO:0061371 HSSP:P48431
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 HOGENOM:HOG000069999
OrthoDB:EOG4KD6M5 EMBL:AY157635 EMBL:AC148408 EMBL:CR848309
EMBL:BC074527 RefSeq:NP_989425.1 UniGene:Str.114
ProteinModelPortal:Q8AWH3 SMR:Q8AWH3 STRING:Q8AWH3
Ensembl:ENSXETT00000053697 GeneID:395066 KEGG:xtr:395066 CTD:395066
Xenbase:XB-GENE-484295 InParanoid:Q8AWH3 OMA:FNGHEAN Bgee:Q8AWH3
GO:GO:0035469 Uniprot:Q8AWH3
Length = 383
Score = 228 (85.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 60 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRV 119
Query: 142 VHMKEH 147
HM++H
Sbjct: 120 QHMQDH 125
>MGI|MGI:107543 [details] [associations]
symbol:Sox17 "SRY-box containing gene 17" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IGI] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0001828 "inner cell mass cellular morphogenesis" evidence=IMP]
[GO:0001947 "heart looping" evidence=IMP] [GO:0003142 "cardiogenic
plate morphogenesis" evidence=IMP] [GO:0003143 "embryonic heart
tube morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003308 "negative regulation of
Wnt receptor signaling pathway involved in heart development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IDA] [GO:0007369 "gastrulation"
evidence=IMP] [GO:0007492 "endoderm development" evidence=IMP]
[GO:0007493 "endodermal cell fate determination" evidence=IDA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0016055 "Wnt
receptor signaling pathway" evidence=IEA] [GO:0021903 "rostrocaudal
neural tube patterning" evidence=IMP] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IDA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IDA;IMP] [GO:0030308 "negative
regulation of cell growth" evidence=ISO] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0035050 "embryonic heart tube
development" evidence=IGI] [GO:0042074 "cell migration involved in
gastrulation" evidence=IMP] [GO:0042661 "regulation of mesodermal
cell fate specification" evidence=IMP] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IMP]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045595 "regulation of cell
differentiation" evidence=IMP] [GO:0045597 "positive regulation of
cell differentiation" evidence=IMP;IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0045995 "regulation
of embryonic development" evidence=IMP] [GO:0048568 "embryonic
organ development" evidence=IMP] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IMP] [GO:0048643 "positive regulation of
skeletal muscle tissue development" evidence=IDA] [GO:0048863 "stem
cell differentiation" evidence=IMP] [GO:0048866 "stem cell fate
specification" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IDA] [GO:0060214 "endocardium formation"
evidence=IGI] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IMP] [GO:0060913 "cardiac cell fate
determination" evidence=ISO] [GO:0060956 "endocardial cell
differentiation" evidence=IGI] [GO:0061009 "common bile duct
development" evidence=IMP] [GO:0061010 "gall bladder development"
evidence=IMP] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IMP] [GO:0072001 "renal system development"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=ISO] [GO:2000035 "regulation
of stem cell division" evidence=IMP] [GO:2000043 "regulation of
cardiac cell fate specification" evidence=IMP] InterPro:IPR009071
MGI:MGI:107543 Pfam:PF00505 GO:GO:0005634 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214
eggNOG:NOG242943 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321
HOGENOM:HOG000069999 HOVERGEN:HBG000517 OMA:ALPCRDG
OrthoDB:EOG4KD6M5 GO:GO:0003142 GO:GO:0001828 GO:GO:2000043
GO:GO:0060807 GO:GO:0048866 EMBL:D49474 EMBL:D49473 EMBL:AK004781
EMBL:L29085 IPI:IPI00121298 IPI:IPI00230012 RefSeq:NP_035571.1
UniGene:Mm.279103 PDB:3F27 PDBsum:3F27 ProteinModelPortal:Q61473
SMR:Q61473 STRING:Q61473 PhosphoSite:Q61473 PRIDE:Q61473
DNASU:20671 Ensembl:ENSMUST00000027035 Ensembl:ENSMUST00000116652
GeneID:20671 KEGG:mmu:20671 UCSC:uc007aey.1 UCSC:uc007afb.1
InParanoid:Q61473 NextBio:299151 Bgee:Q61473 CleanEx:MM_SOX17
Genevestigator:Q61473 GermOnline:ENSMUSG00000025902 Uniprot:Q61473
Length = 419
Score = 229 (85.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 38/69 (55%), Positives = 54/69 (78%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+R
Sbjct: 64 AESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAER 123
Query: 139 LRAVHMKEH 147
LR HM++H
Sbjct: 124 LRVQHMQDH 132
>RGD|1305371 [details] [associations]
symbol:Sox17 "SRY (sex determining region Y)-box 17"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001525 "angiogenesis" evidence=IEA;ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001706 "endoderm formation"
evidence=ISO] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA;ISO] [GO:0001947 "heart looping" evidence=IEA;ISO]
[GO:0003142 "cardiogenic plate morphogenesis" evidence=IEA;ISO]
[GO:0003143 "embryonic heart tube morphogenesis" evidence=ISO]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA;ISO]
[GO:0003308 "negative regulation of Wnt receptor signaling pathway
involved in heart development" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0007369 "gastrulation" evidence=ISO]
[GO:0007492 "endoderm development" evidence=ISO] [GO:0007493
"endodermal cell fate determination" evidence=IEA;ISO] [GO:0008013
"beta-catenin binding" evidence=IEA;ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010628 "positive regulation of gene expression"
evidence=ISO] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA;ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA;ISO] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=IEA;ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0035050 "embryonic heart tube development"
evidence=ISO] [GO:0042074 "cell migration involved in gastrulation"
evidence=IEA;ISO] [GO:0042661 "regulation of mesodermal cell fate
specification" evidence=ISO] [GO:0042662 "negative regulation of
mesodermal cell fate specification" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA;ISO] [GO:0045595 "regulation of cell differentiation"
evidence=ISO] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA;ISO] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0045995 "regulation
of embryonic development" evidence=ISO] [GO:0048568 "embryonic
organ development" evidence=IEA;ISO] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA;ISO] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0048863 "stem cell differentiation" evidence=ISO] [GO:0048866
"stem cell fate specification" evidence=IEA;ISO] [GO:0050821
"protein stabilization" evidence=IEA;ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA;ISO] [GO:0060214
"endocardium formation" evidence=IEA;ISO] [GO:0060807 "regulation
of transcription from RNA polymerase II promoter involved in
definitive endodermal cell fate specification" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0060956 "endocardial cell differentiation" evidence=IEA;ISO]
[GO:0061009 "common bile duct development" evidence=IEA;ISO]
[GO:0061010 "gall bladder development" evidence=IEA;ISO]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=IEA;ISO] [GO:0072001 "renal system development"
evidence=IEA;ISO] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA;ISO] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:2000035 "regulation of stem cell division" evidence=IEA;ISO]
[GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1305371
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:CH473984 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG
RefSeq:NP_001101372.1 UniGene:Rn.7884 Ensembl:ENSRNOT00000033116
GeneID:312936 KEGG:rno:312936 NextBio:665393 Uniprot:G3V923
Length = 423
Score = 229 (85.7 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 38/69 (55%), Positives = 54/69 (78%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+R
Sbjct: 64 AESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAER 123
Query: 139 LRAVHMKEH 147
LR HM++H
Sbjct: 124 LRVQHMQDH 132
>UNIPROTKB|F1NFH7 [details] [associations]
symbol:SOX2 "Transcription factor SOX-2" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001714 "endodermal
cell fate specification" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0007050 "cell cycle arrest"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021987
"cerebral cortex development" evidence=IEA] [GO:0030539 "male
genitalia development" evidence=IEA] [GO:0030858 "positive
regulation of epithelial cell differentiation" evidence=IEA]
[GO:0030910 "olfactory placode formation" evidence=IEA] [GO:0032526
"response to retinoic acid" evidence=IEA] [GO:0035019 "somatic stem
cell maintenance" evidence=IEA] [GO:0035198 "miRNA binding"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0043281 "regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043410 "positive
regulation of MAPK cascade" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043586 "tongue
development" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IEA] [GO:0045668
"negative regulation of osteoblast differentiation" evidence=IEA]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046148 "pigment
biosynthetic process" evidence=IEA] [GO:0048286 "lung alveolus
development" evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IEA] [GO:0048852 "diencephalon morphogenesis"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
[GO:0050973 "detection of mechanical stimulus involved in
equilibrioception" evidence=IEA] [GO:0060042 "retina morphogenesis
in camera-type eye" evidence=IEA] [GO:0060235 "lens induction in
camera-type eye" evidence=IEA] [GO:0060441 "epithelial tube
branching involved in lung morphogenesis" evidence=IEA] [GO:0070848
"response to growth factor stimulus" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005829
GO:GO:0001708 GO:GO:0009611 GO:GO:0043565 GO:GO:0045944
GO:GO:0048863 GO:GO:0003700 GO:GO:0045747 GO:GO:0007050
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0032526 GO:GO:0043410 GO:GO:0090090 GO:GO:0035198
GO:GO:0050680 GO:GO:0070848 GO:GO:0030858 GO:GO:0045668
GO:GO:0046148 GO:GO:0043281 GeneTree:ENSGT00690000101940
EMBL:AADN02020755 IPI:IPI00822043 Ensembl:ENSGALT00000039636
ArrayExpress:F1NFH7 Uniprot:F1NFH7
Length = 54
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 42/47 (89%), Positives = 45/47 (95%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLRA+HMKEH
Sbjct: 1 MAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEH 47
>UNIPROTKB|Q3KQ35 [details] [associations]
symbol:sox17a-a "Transcription factor Sox-17-alpha-A"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA]
[GO:0007440 "foregut morphogenesis" evidence=IMP] [GO:0007442
"hindgut morphogenesis" evidence=IMP] [GO:0007492 "endoderm
development" evidence=IMP] [GO:0007494 "midgut development"
evidence=IMP] [GO:0008013 "beta-catenin binding" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0008285 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0007494 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0090090
GO:GO:0008013 GO:GO:0042074 GO:GO:0007492 GO:GO:0007440
GO:GO:0007442 HSSP:P48431 EMBL:AJ001730 EMBL:BC106403 EMBL:AB052690
RefSeq:NP_001081631.1 UniGene:Xl.3831 ProteinModelPortal:Q3KQ35
SMR:Q3KQ35 GeneID:397966 KEGG:xla:397966 CTD:397966
Xenbase:XB-GENE-865067 KO:K04495 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 Uniprot:Q3KQ35
Length = 380
Score = 227 (85.0 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 60 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRV 119
Query: 142 VHMKEH 147
HM++H
Sbjct: 120 QHMQDH 125
>UNIPROTKB|F1RSI1 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:CU463866 RefSeq:XP_001928411.1 Ensembl:ENSSSCT00000006855
GeneID:100154087 KEGG:ssc:100154087 Uniprot:F1RSI1
Length = 407
Score = 228 (85.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRV 126
Query: 142 VHMKEH 147
HM++H
Sbjct: 127 QHMQDH 132
>UNIPROTKB|F1N1F9 [details] [associations]
symbol:SOX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000043 "regulation of cardiac cell fate specification"
evidence=IEA] [GO:2000035 "regulation of stem cell division"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA] [GO:0072001 "renal system
development" evidence=IEA] [GO:0061031 "endodermal digestive tract
morphogenesis" evidence=IEA] [GO:0061010 "gall bladder development"
evidence=IEA] [GO:0061009 "common bile duct development"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060913 "cardiac cell fate determination"
evidence=IEA] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
tissue development" evidence=IEA] [GO:0048617 "embryonic foregut
morphogenesis" evidence=IEA] [GO:0048568 "embryonic organ
development" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042662 "negative
regulation of mesodermal cell fate specification" evidence=IEA]
[GO:0042074 "cell migration involved in gastrulation" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0023019
"signal transduction involved in regulation of gene expression"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0007493 "endodermal cell fate determination" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003308 "negative
regulation of Wnt receptor signaling pathway involved in heart
development" evidence=IEA] [GO:0003151 "outflow tract
morphogenesis" evidence=IEA] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=IEA] [GO:0001947 "heart looping"
evidence=IEA] [GO:0001828 "inner cell mass cellular morphogenesis"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0050821
GO:GO:0030308 GO:GO:0043565 GO:GO:0045597 GO:GO:0045944
GO:GO:0007283 GO:GO:0001525 GO:GO:0005667 GO:GO:0003705
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0003713 GO:GO:0001570
GO:GO:0090090 GO:GO:0001947 GO:GO:0045732 GO:GO:0042074
GO:GO:0003151 GO:GO:0060070 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0048643 GO:GO:2000035 GO:GO:0042662 GO:GO:0072001
GO:GO:0007493 GO:GO:0072091 GO:GO:0061031 GO:GO:0061009
GO:GO:0061010 GO:GO:0060913 GO:GO:0060956 GO:GO:0060214 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 CTD:64321 OMA:ALPCRDG GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
EMBL:DAAA02038302 IPI:IPI00687993 RefSeq:NP_001193180.1
UniGene:Bt.112292 Ensembl:ENSBTAT00000007553 GeneID:534010
KEGG:bta:534010 NextBio:20876231 Uniprot:F1N1F9
Length = 410
Score = 228 (85.3 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRV 126
Query: 142 VHMKEH 147
HM++H
Sbjct: 127 QHMQDH 132
>UNIPROTKB|Q9H6I2 [details] [associations]
symbol:SOX17 "Transcription factor SOX-17" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001828 "inner
cell mass cellular morphogenesis" evidence=IEA] [GO:0003308
"negative regulation of Wnt receptor signaling pathway involved in
heart development" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007493 "endodermal cell fate determination"
evidence=IEA] [GO:0021903 "rostrocaudal neural tube patterning"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IEA] [GO:0042662
"negative regulation of mesodermal cell fate specification"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045597 "positive regulation of cell
differentiation" evidence=IEA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IEA] [GO:0048568 "embryonic
organ development" evidence=IEA] [GO:0048643 "positive regulation
of skeletal muscle tissue development" evidence=IEA] [GO:0048866
"stem cell fate specification" evidence=IEA] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0061009 "common
bile duct development" evidence=IEA] [GO:0061010 "gall bladder
development" evidence=IEA] [GO:0072091 "regulation of stem cell
proliferation" evidence=IEA] [GO:2000035 "regulation of stem cell
division" evidence=IEA] [GO:2000043 "regulation of cardiac cell
fate specification" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001706 "endoderm formation" evidence=IDA]
[GO:0001947 "heart looping" evidence=ISS] [GO:0045995 "regulation
of embryonic development" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008013
"beta-catenin binding" evidence=IPI] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0035050 "embryonic heart tube development" evidence=ISS]
[GO:0001570 "vasculogenesis" evidence=ISS] [GO:0001525
"angiogenesis" evidence=ISS] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0060914 "heart formation" evidence=TAS]
[GO:0060913 "cardiac cell fate determination" evidence=IMP]
[GO:0061031 "endodermal digestive tract morphogenesis"
evidence=ISS] [GO:0060807 "regulation of transcription from RNA
polymerase II promoter involved in definitive endodermal cell fate
specification" evidence=ISS] [GO:0048617 "embryonic foregut
morphogenesis" evidence=ISS] [GO:0003143 "embryonic heart tube
morphogenesis" evidence=ISS] [GO:0003142 "cardiogenic plate
morphogenesis" evidence=ISS] [GO:0072001 "renal system development"
evidence=IMP] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0030308 "negative
regulation of cell growth" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 GO:GO:0050821 GO:GO:0030308 GO:GO:0043565
GO:GO:0045597 GO:GO:0045944 GO:GO:0007283 GO:GO:0001525
GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0003713 GO:GO:0001570 GO:GO:0090090 GO:GO:0001947
GO:GO:0045732 GO:GO:0042074 GO:GO:0003151 GO:GO:0060070
GO:GO:0060914 GO:GO:0042789 GO:GO:0048617 GO:GO:0021903
GO:GO:0003308 GO:GO:0031648 GO:GO:0048568 GO:GO:0023019
GO:GO:0045995 GO:GO:0048643 GO:GO:2000035 GO:GO:0042662
GO:GO:0072001 GO:GO:0007493 GO:GO:0072091 GO:GO:0061031
GO:GO:0061009 GO:GO:0061010 GO:GO:0060913 GO:GO:0060956
GO:GO:0060214 eggNOG:NOG242943 Orphanet:289365 KO:K04495
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 EMBL:AB073988
EMBL:AK025905 IPI:IPI00007874 RefSeq:NP_071899.1 UniGene:Hs.98367
PDB:2YUL PDB:4A3N PDBsum:2YUL PDBsum:4A3N ProteinModelPortal:Q9H6I2
SMR:Q9H6I2 STRING:Q9H6I2 PhosphoSite:Q9H6I2 DMDM:23822216
PRIDE:Q9H6I2 DNASU:64321 Ensembl:ENST00000297316 GeneID:64321
KEGG:hsa:64321 UCSC:uc003xsb.4 CTD:64321 GeneCards:GC08P055370
H-InvDB:HIX0034521 HGNC:HGNC:18122 HPA:CAB025594 MIM:610928
MIM:613674 neXtProt:NX_Q9H6I2 PharmGKB:PA38296 HOGENOM:HOG000069999
HOVERGEN:HBG000517 InParanoid:Q9H6I2 OMA:ALPCRDG OrthoDB:EOG4KD6M5
PhylomeDB:Q9H6I2 EvolutionaryTrace:Q9H6I2 GenomeRNAi:64321
NextBio:66237 ArrayExpress:Q9H6I2 Bgee:Q9H6I2 CleanEx:HS_SOX17
Genevestigator:Q9H6I2 GermOnline:ENSG00000164736 GO:GO:0003142
GO:GO:0001828 GO:GO:2000043 GO:GO:0060807 GO:GO:0048866
Uniprot:Q9H6I2
Length = 414
Score = 228 (85.3 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRV 126
Query: 142 VHMKEH 147
HM++H
Sbjct: 127 QHMQDH 132
>UNIPROTKB|P40650 [details] [associations]
symbol:sox11-b "Transcription factor Sox-11-B" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D87209 EMBL:BC070707
EMBL:X65656 PIR:S22948 RefSeq:NP_001084325.1 UniGene:Xl.78258
ProteinModelPortal:P40650 SMR:P40650 GeneID:399440 KEGG:xla:399440
CTD:399440 Xenbase:XB-GENE-483422 Uniprot:P40650
Length = 374
Score = 226 (84.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+LN+ K PFI EA+R
Sbjct: 41 ATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAER 100
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 101 LRLKHMADY 109
>UNIPROTKB|Q91731 [details] [associations]
symbol:sox11-a "Transcription factor Sox-11-A" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0007399 "nervous system
development" evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 EMBL:D86076 EMBL:D83650
PIR:S72169 RefSeq:NP_001135834.1 UniGene:Xl.891 GeneID:100216330
KEGG:xla:100216330 CTD:100216330 Xenbase:XB-GENE-6252061
Uniprot:Q91731
Length = 382
Score = 226 (84.6 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+LN+ K PFI EA+R
Sbjct: 43 ATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAER 102
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 103 LRLKHMADY 111
>UNIPROTKB|Q66JF1 [details] [associations]
symbol:sox11 "Transcription factor Sox-11" species:8364
"Xenopus (Silurana) tropicalis" [GO:0007399 "nervous system
development" evidence=ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 CTD:6664 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659 EMBL:AC148407
EMBL:BC080939 RefSeq:NP_001008053.1 UniGene:Str.15716 HSSP:P48432
ProteinModelPortal:Q66JF1 SMR:Q66JF1 STRING:Q66JF1 GeneID:493415
KEGG:xtr:493415 Xenbase:XB-GENE-483418 Uniprot:Q66JF1
Length = 383
Score = 226 (84.6 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 41/69 (59%), Positives = 53/69 (76%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+LN+ K PFI EA+R
Sbjct: 44 ATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAER 103
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 104 LRLKHMADY 112
>UNIPROTKB|Q8AXX8 [details] [associations]
symbol:sox10 "Transcription factor Sox-10" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0014029 "neural crest formation"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0032183
"SUMO binding" evidence=IPI] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030318 GO:GO:0014029
HSSP:P48431 CTD:6663 KO:K09270 InterPro:IPR022151 Pfam:PF12444
EMBL:AY149116 EMBL:AY157667 EMBL:BC170062 RefSeq:NP_001082358.1
UniGene:Xl.1588 ProteinModelPortal:Q8AXX8 SMR:Q8AXX8 GeneID:398422
KEGG:xla:398422 Xenbase:XB-GENE-865362 Uniprot:Q8AXX8
Length = 446
Score = 228 (85.3 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNENDKRPFIEEAERLRMQ 157
Query: 143 HMKEH 147
H K+H
Sbjct: 158 HKKDH 162
>UNIPROTKB|Q9W757 [details] [associations]
symbol:SOX10 "Transcription factor SOX-10" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001755 "neural
crest cell migration" evidence=IEA] [GO:0002052 "positive
regulation of neuroblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007422 "peripheral nervous system
development" evidence=IEA] [GO:0014015 "positive regulation of
gliogenesis" evidence=IEA] [GO:0030318 "melanocyte differentiation"
evidence=IEA] [GO:0031315 "extrinsic to mitochondrial outer
membrane" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048546 "digestive
tract morphogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0060959 "cardiac
neuron development" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043066 GO:GO:0045944 GO:GO:0003682
GO:GO:0003705 GO:GO:0000980 GO:GO:0000978 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048589
GO:GO:0090090 GO:GO:0030318 GO:GO:0031315 EMBL:AF152356
EMBL:AJ245601 IPI:IPI00599244 RefSeq:NP_990123.1 UniGene:Gga.4428
ProteinModelPortal:Q9W757 SMR:Q9W757 STRING:Q9W757
Ensembl:ENSGALT00000020083 GeneID:395573 KEGG:gga:395573 CTD:6663
eggNOG:NOG295709 GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 InParanoid:Q9W757 KO:K09270 OMA:GPSMASD
OrthoDB:EOG41C6WH NextBio:20815647 GO:GO:0060959 InterPro:IPR022151
Pfam:PF12444 Uniprot:Q9W757
Length = 461
Score = 228 (85.3 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRMQ 157
Query: 143 HMKEH 147
H K+H
Sbjct: 158 HKKDH 162
>MGI|MGI:103559 [details] [associations]
symbol:Sox18 "SRY-box containing gene 18" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000978 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding"
evidence=ISO] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001525 "angiogenesis" evidence=IGI] [GO:0001568 "blood vessel
development" evidence=IMP] [GO:0001570 "vasculogenesis"
evidence=IGI] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0001944 "vasculature development" evidence=IMP] [GO:0001945
"lymph vessel development" evidence=IMP] [GO:0001946
"lymphangiogenesis" evidence=ISO;IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0007507 "heart development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IGI] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISO;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048469 "cell maturation"
evidence=IDA] [GO:0048866 "stem cell fate specification"
evidence=IDA] [GO:0060214 "endocardium formation" evidence=IGI]
[GO:0060836 "lymphatic endothelial cell differentiation"
evidence=IMP] [GO:0060956 "endocardial cell differentiation"
evidence=IGI] [GO:0061028 "establishment of endothelial barrier"
evidence=ISO] [GO:0072091 "regulation of stem cell proliferation"
evidence=IDA] InterPro:IPR009071 MGI:MGI:103559 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942 GO:GO:0001946
GO:GO:0060836 GO:GO:0043534 GO:GO:0001570 GO:GO:0048469
GO:GO:0035050 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:L35032 EMBL:AF288518
EMBL:BC006612 EMBL:L29086 IPI:IPI00377924 RefSeq:NP_033262.2
UniGene:Mm.264904 ProteinModelPortal:P43680 SMR:P43680
STRING:P43680 PhosphoSite:P43680 PRIDE:P43680
Ensembl:ENSMUST00000054491 GeneID:20672 KEGG:mmu:20672
InParanoid:P43680 NextBio:299155 Bgee:P43680 CleanEx:MM_SOX18
Genevestigator:P43680 GermOnline:ENSMUSG00000046470 Uniprot:P43680
Length = 377
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 36/66 (54%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK LN KRPF++EA+RLR
Sbjct: 78 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRV 137
Query: 142 VHMKEH 147
H+++H
Sbjct: 138 QHLRDH 143
>RGD|1311718 [details] [associations]
symbol:Sox18 "SRY (sex determining region Y)-box 18"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=ISO] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=IEA;ISO]
[GO:0001568 "blood vessel development" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001942 "hair follicle
development" evidence=IEA;ISO] [GO:0001944 "vasculature
development" evidence=ISO] [GO:0001945 "lymph vessel development"
evidence=ISO] [GO:0001946 "lymphangiogenesis" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007507 "heart development"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0022405 "hair cycle process" evidence=ISO] [GO:0035050
"embryonic heart tube development" evidence=IEA;ISO] [GO:0042789
"mRNA transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0048469 "cell
maturation" evidence=IEA;ISO] [GO:0048866 "stem cell fate
specification" evidence=IEA;ISO] [GO:0060214 "endocardium
formation" evidence=IEA;ISO] [GO:0060836 "lymphatic endothelial
cell differentiation" evidence=IEA;ISO] [GO:0060956 "endocardial
cell differentiation" evidence=IEA;ISO] [GO:0061028 "establishment
of endothelial barrier" evidence=IEA;ISO] [GO:0072091 "regulation
of stem cell proliferation" evidence=IEA;ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1311718 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
GO:GO:0001701 GO:GO:0045944 GO:GO:0003700 GO:GO:0001525
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0001942 GO:GO:0001946 GO:GO:0060836
GO:GO:0043534 GO:GO:0001570 GO:GO:0048469 GO:GO:0035050
GO:GO:0072091 GO:GO:0060956 GO:GO:0060214 GO:GO:0061028
EMBL:CH474066 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
HOVERGEN:HBG000517 GO:GO:0048866 CTD:54345 eggNOG:NOG252325
OMA:YLNCSRT OrthoDB:EOG4KSPKP EMBL:BC097973 IPI:IPI00211524
RefSeq:NP_001019952.1 UniGene:Rn.22446 SMR:Q4V7E4
Ensembl:ENSRNOT00000021790 GeneID:311723 KEGG:rno:311723
UCSC:RGD:1311718 InParanoid:Q4V7E4 NextBio:664090
Genevestigator:Q4V7E4 Uniprot:Q4V7E4
Length = 377
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 36/66 (54%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK LN KRPF++EA+RLR
Sbjct: 78 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNTAEKRPFVEEAERLRV 137
Query: 142 VHMKEH 147
H+++H
Sbjct: 138 QHLRDH 143
>UNIPROTKB|P35713 [details] [associations]
symbol:SOX18 "Transcription factor SOX-18" species:9606
"Homo sapiens" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048866 "stem cell
fate specification" evidence=IEA] [GO:0072091 "regulation of stem
cell proliferation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0061028 "establishment of endothelial barrier" evidence=IMP]
[GO:0001525 "angiogenesis" evidence=IEP] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IEP] [GO:0001946
"lymphangiogenesis" evidence=IMP] [GO:0022405 "hair cycle process"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0003151 "outflow tract morphogenesis"
evidence=ISS] [GO:0001947 "heart looping" evidence=ISS] [GO:0001570
"vasculogenesis" evidence=ISS] [GO:0001944 "vasculature
development" evidence=ISS] [GO:0035050 "embryonic heart tube
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0060214 "endocardium formation" evidence=ISS] [GO:0060836
"lymphatic endothelial cell differentiation" evidence=ISS]
[GO:0060956 "endocardial cell differentiation" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001701 GO:GO:0001525
GO:GO:0000978 GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000790
GO:GO:0001942 GO:GO:0001946 GO:GO:0060836 GO:GO:0043534
GO:GO:0001570 GO:GO:0001947 GO:GO:0003151 GO:GO:0042789
GO:GO:0048469 GO:GO:0072091 GO:GO:0060956 GO:GO:0060214
GO:GO:0061028 EMBL:AL355803 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
GO:GO:0048866 EMBL:AJ243896 EMBL:AB033888 EMBL:AF270652
EMBL:BC038590 EMBL:BC073971 EMBL:BC111390 EMBL:X65664
IPI:IPI00020428 PIR:S22941 RefSeq:NP_060889.1 UniGene:Hs.8619
ProteinModelPortal:P35713 SMR:P35713 IntAct:P35713 STRING:P35713
PhosphoSite:P35713 DMDM:12644232 PaxDb:P35713 PRIDE:P35713
Ensembl:ENST00000340356 GeneID:54345 KEGG:hsa:54345 UCSC:uc002yhs.3
CTD:54345 GeneCards:GC20M062679 HGNC:HGNC:11194 MIM:601618
MIM:607823 neXtProt:NX_P35713 Orphanet:69735 PharmGKB:PA36031
eggNOG:NOG252325 InParanoid:P35713 OMA:YLNCSRT OrthoDB:EOG4KSPKP
GenomeRNAi:54345 NextBio:56587 Bgee:P35713 CleanEx:HS_SOX18
Genevestigator:P35713 GermOnline:ENSG00000203883 GO:GO:0022405
Uniprot:P35713
Length = 384
Score = 224 (83.9 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 36/66 (54%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK LN KRPF++EA+RLR
Sbjct: 84 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELNAAEKRPFVEEAERLRV 143
Query: 142 VHMKEH 147
H+++H
Sbjct: 144 QHLRDH 149
>ZFIN|ZDB-GENE-991213-1 [details] [associations]
symbol:sox17 "SRY-box containing gene 17"
species:7955 "Danio rerio" [GO:0070121 "Kupffer's vesicle
development" evidence=IMP] [GO:0061371 "determination of heart
left/right asymmetry" evidence=IMP] [GO:0035469 "determination of
pancreatic left/right asymmetry" evidence=IMP] InterPro:IPR009071
Pfam:PF00505 ZFIN:ZDB-GENE-991213-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0070121 GO:GO:0061371
HSSP:P48432 HOVERGEN:HBG000517 GO:GO:0035469 EMBL:AF168614
IPI:IPI00490847 UniGene:Dr.81308 ProteinModelPortal:Q9PTN0
SMR:Q9PTN0 STRING:Q9PTN0 InParanoid:Q9PTN0 ArrayExpress:Q9PTN0
Uniprot:Q9PTN0
Length = 413
Score = 225 (84.3 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 37/66 (56%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+E+SK LG WK L KRPF++EA+RLR
Sbjct: 62 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALPMVDKRPFVEEAERLRV 121
Query: 142 VHMKEH 147
HM++H
Sbjct: 122 KHMQDH 127
>UNIPROTKB|P57073 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0046533 "negative regulation of photoreceptor
cell differentiation" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0014015 "positive
regulation of gliogenesis" evidence=ISS] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISS] [GO:0048484 "enteric
nervous system development" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0001649 "osteoblast differentiation"
evidence=ISS] [GO:0001701 "in utero embryonic development"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0010817 "regulation of hormone levels" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045444 "fat cell differentiation" evidence=ISS]
[GO:0045165 "cell fate commitment" evidence=ISS] [GO:0060009
"Sertoli cell development" evidence=ISS] [GO:0048709
"oligodendrocyte differentiation" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=ISS] [GO:0060221 "retinal
rod cell differentiation" evidence=ISS] [GO:0061138 "morphogenesis
of a branching epithelium" evidence=ISS] [GO:0072197 "ureter
morphogenesis" evidence=ISS] [GO:0072289 "metanephric nephron
tubule formation" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0008584 "male
gonad development" evidence=ISS] [GO:0045662 "negative regulation
of myoblast differentiation" evidence=ISS] [GO:0060612 "adipose
tissue development" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
EMBL:AE006465 GO:GO:0060018 GO:GO:0014015 GO:GO:0072289
GO:GO:0072197 HOGENOM:HOG000108876 HOVERGEN:HBG002061 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 eggNOG:NOG324597
OrthoDB:EOG4ZKJMD EMBL:AF226675 EMBL:Z99757 EMBL:BC031797
EMBL:AF164104 IPI:IPI00299069 RefSeq:NP_055402.2 UniGene:Hs.243678
ProteinModelPortal:P57073 SMR:P57073 IntAct:P57073 STRING:P57073
PhosphoSite:P57073 DMDM:10720294 PRIDE:P57073
Ensembl:ENST00000293894 GeneID:30812 KEGG:hsa:30812 UCSC:uc002ckn.3
GeneCards:GC16P001033 HGNC:HGNC:11203 HPA:HPA041640 MIM:605923
neXtProt:NX_P57073 PharmGKB:PA36040 InParanoid:P57073 OMA:DQSHGSP
PhylomeDB:P57073 ChiTaRS:SOX8 GenomeRNAi:30812 NextBio:52860
Bgee:P57073 CleanEx:HS_SOX8 Genevestigator:P57073
GermOnline:ENSG00000005513 GO:GO:0061138 GO:GO:0072034
GO:GO:0060221 Uniprot:P57073
Length = 446
Score = 224 (83.9 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 102 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQ 161
Query: 143 HMKEH 147
H K+H
Sbjct: 162 HKKDH 166
>UNIPROTKB|P40670 [details] [associations]
symbol:P40670 "SRY-related protein CH31" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86323 IPI:IPI00575625
PIR:I50192 ProteinModelPortal:P40670 SMR:P40670 STRING:P40670
InParanoid:P40670 Uniprot:P40670
Length = 54
Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 41/47 (87%), Positives = 45/47 (95%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MAQ+NPKMHNSEISKRLGAEWKLL+E KRPFIDEAKRLRA+HMKE+
Sbjct: 1 MAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRAMHMKEY 47
>UNIPROTKB|Q6VVD7 [details] [associations]
symbol:sox8 "Transcription factor Sox-8" species:8355
"Xenopus laevis" [GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014029 KO:K09270
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 CTD:30812 EMBL:AY324658
EMBL:BC169521 EMBL:BC169525 RefSeq:NP_001083964.1 UniGene:Xl.29789
ProteinModelPortal:Q6VVD7 SMR:Q6VVD7 GeneID:399214 KEGG:xla:399214
Xenbase:XB-GENE-480869 Uniprot:Q6VVD7
Length = 459
Score = 224 (83.9 bits), Expect = 6.3e-18, P = 6.3e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 98 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQ 157
Query: 143 HMKEH 147
H K+H
Sbjct: 158 HKKDH 162
>RGD|1309072 [details] [associations]
symbol:Sox8 "SRY (sex determining region Y)-box 8" species:10116
"Rattus norvegicus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001649
"osteoblast differentiation" evidence=ISO;ISS] [GO:0001701 "in
utero embryonic development" evidence=ISO;ISS] [GO:0001755 "neural
crest cell migration" evidence=ISO;ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007165 "signal transduction" evidence=ISO;ISS] [GO:0007283
"spermatogenesis" evidence=ISO;ISS] [GO:0007422 "peripheral nervous
system development" evidence=ISO;ISS] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008584 "male gonad development" evidence=ISO;ISS]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0010817 "regulation of hormone levels" evidence=ISO;ISS]
[GO:0014015 "positive regulation of gliogenesis" evidence=ISO;ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISO;ISS] [GO:0035914 "skeletal muscle cell
differentiation" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO;ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISO] [GO:0045165 "cell fate commitment"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISO;ISS] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=ISO;ISS] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046533
"negative regulation of photoreceptor cell differentiation"
evidence=IEA;ISO] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048484 "enteric nervous system development" evidence=ISO;ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISO;ISS]
[GO:0060009 "Sertoli cell development" evidence=ISO;ISS]
[GO:0060018 "astrocyte fate commitment" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye"
evidence=ISO;ISS] [GO:0060221 "retinal rod cell differentiation"
evidence=ISO;ISS] [GO:0060612 "adipose tissue development"
evidence=ISO;ISS] [GO:0061138 "morphogenesis of a branching
epithelium" evidence=ISO;ISS] [GO:0072034 "renal vesicle induction"
evidence=ISO;ISS] [GO:0072197 "ureter morphogenesis"
evidence=ISO;ISS] [GO:0072289 "metanephric nephron tubule
formation" evidence=ISO;ISS] [GO:0090184 "positive regulation of
kidney development" evidence=ISO;ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISO;ISS] InterPro:IPR009071 Pfam:PF00505 RGD:1309072
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0007165
GO:GO:0045893 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190 GO:GO:0001649
GO:GO:0045444 GO:GO:0000979 EMBL:CH473948 GO:GO:0048709
GO:GO:0048484 GO:GO:0010817 GO:GO:0048469 GO:GO:0033690
GO:GO:0045662 GO:GO:0046533 GO:GO:0060018 GO:GO:0014015
GO:GO:0072289 GO:GO:0072197 GeneTree:ENSGT00670000097649 KO:K09270
InterPro:IPR022151 Pfam:PF12444 CTD:30812 OrthoDB:EOG4ZKJMD
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
IPI:IPI00368755 RefSeq:NP_001100459.1 UniGene:Rn.141194
Ensembl:ENSRNOT00000025494 GeneID:302993 KEGG:rno:302993
UCSC:RGD:1309072 NextBio:650512 Uniprot:D3ZR96
Length = 463
Score = 224 (83.9 bits), Expect = 6.4e-18, P = 6.4e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 99 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQ 158
Query: 143 HMKEH 147
H K+H
Sbjct: 159 HKKDH 163
>MGI|MGI:98370 [details] [associations]
symbol:Sox8 "SRY-box containing gene 8" species:10090 "Mus
musculus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IDA] [GO:0001649
"osteoblast differentiation" evidence=IMP] [GO:0001701 "in utero
embryonic development" evidence=IGI] [GO:0001755 "neural crest cell
migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IMP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IMP;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IGI;IMP] [GO:0007422 "peripheral nervous system
development" evidence=IGI] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008584 "male gonad development"
evidence=IGI] [GO:0010628 "positive regulation of gene expression"
evidence=IGI] [GO:0010817 "regulation of hormone levels"
evidence=IMP] [GO:0014015 "positive regulation of gliogenesis"
evidence=IMP] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IMP] [GO:0035914 "skeletal muscle cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045444 "fat cell differentiation" evidence=IMP]
[GO:0045662 "negative regulation of myoblast differentiation"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IGI] [GO:0048469 "cell
maturation" evidence=IGI;IMP] [GO:0048484 "enteric nervous system
development" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0060009 "Sertoli cell
development" evidence=IGI] [GO:0060018 "astrocyte fate commitment"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] [GO:0060221 "retinal rod cell differentiation"
evidence=IGI] [GO:0060612 "adipose tissue development"
evidence=IMP] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IGI] [GO:0072034 "renal vesicle induction" evidence=IMP]
[GO:0072197 "ureter morphogenesis" evidence=IGI] [GO:0072289
"metanephric nephron tubule formation" evidence=IGI] [GO:0090184
"positive regulation of kidney development" evidence=IGI]
[GO:0090190 "positive regulation of branching involved in ureteric
bud morphogenesis" evidence=IMP] InterPro:IPR009071 MGI:MGI:98370
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045892
GO:GO:0007165 GO:GO:0043066 GO:GO:0001755 GO:GO:0001701
GO:GO:0045944 GO:GO:0007422 GO:GO:0060612 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009 GO:GO:0090190
GO:GO:0001649 GO:GO:0045444 GO:GO:0035914 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 InterPro:IPR022151 Pfam:PF12444
CTD:30812 eggNOG:NOG324597 OrthoDB:EOG4ZKJMD OMA:DQSHGSP
ChiTaRS:SOX8 GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:AF191325 EMBL:BC085619 EMBL:Z18957 IPI:IPI00111141 PIR:S30246
RefSeq:NP_035577.1 UniGene:Mm.258220 ProteinModelPortal:Q04886
SMR:Q04886 IntAct:Q04886 STRING:Q04886 PhosphoSite:Q04886
PRIDE:Q04886 Ensembl:ENSMUST00000025003 GeneID:20681 KEGG:mmu:20681
InParanoid:Q04886 NextBio:299189 Bgee:Q04886 CleanEx:MM_SOX8
Genevestigator:Q04886 GermOnline:ENSMUSG00000024176 Uniprot:Q04886
Length = 464
Score = 224 (83.9 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 99 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQ 158
Query: 143 HMKEH 147
H K+H
Sbjct: 159 HKKDH 163
>UNIPROTKB|F1MBL5 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090190 "positive regulation of branching involved in
ureteric bud morphogenesis" evidence=IEA] [GO:0072289 "metanephric
nephron tubule formation" evidence=IEA] [GO:0072197 "ureter
morphogenesis" evidence=IEA] [GO:0072034 "renal vesicle induction"
evidence=IEA] [GO:0061138 "morphogenesis of a branching epithelium"
evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0060221 "retinal rod cell differentiation"
evidence=IEA] [GO:0060018 "astrocyte fate commitment" evidence=IEA]
[GO:0060009 "Sertoli cell development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0048484
"enteric nervous system development" evidence=IEA] [GO:0048469
"cell maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045662 "negative
regulation of myoblast differentiation" evidence=IEA] [GO:0045444
"fat cell differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0033690
"positive regulation of osteoblast proliferation" evidence=IEA]
[GO:0014015 "positive regulation of gliogenesis" evidence=IEA]
[GO:0010817 "regulation of hormone levels" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007422 "peripheral nervous system development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001755 "neural crest cell migration" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0043066
GO:GO:0001755 GO:GO:0001701 GO:GO:0045944 GO:GO:0007422
GO:GO:0060612 GO:GO:0003700 GO:GO:0007283 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0060009
GO:GO:0090190 GO:GO:0001649 GO:GO:0045444 GO:GO:0000979
GO:GO:0048709 GO:GO:0048484 GO:GO:0010817 GO:GO:0048469
GO:GO:0033690 GO:GO:0045662 GO:GO:0046533 GO:GO:0060018
GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
OMA:DQSHGSP GO:GO:0061138 GO:GO:0072034 GO:GO:0060221
EMBL:DAAA02057285 IPI:IPI00696341 Ensembl:ENSBTAT00000027633
Uniprot:F1MBL5
Length = 468
Score = 224 (83.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 108 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQ 167
Query: 143 HMKEH 147
H K+H
Sbjct: 168 HKKDH 172
>UNIPROTKB|F1P1Z5 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007422 "peripheral nervous system development"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010817 "regulation of hormone levels"
evidence=IEA] [GO:0014015 "positive regulation of gliogenesis"
evidence=IEA] [GO:0033690 "positive regulation of osteoblast
proliferation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046533 "negative
regulation of photoreceptor cell differentiation" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0048484 "enteric
nervous system development" evidence=IEA] [GO:0048709
"oligodendrocyte differentiation" evidence=IEA] [GO:0060009
"Sertoli cell development" evidence=IEA] [GO:0060018 "astrocyte
fate commitment" evidence=IEA] [GO:0060221 "retinal rod cell
differentiation" evidence=IEA] [GO:0060612 "adipose tissue
development" evidence=IEA] [GO:0061138 "morphogenesis of a
branching epithelium" evidence=IEA] [GO:0072034 "renal vesicle
induction" evidence=IEA] [GO:0072197 "ureter morphogenesis"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0007165 GO:GO:0043066 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0090190 GO:GO:0045444 GO:GO:0000979
GO:GO:0010817 GO:GO:0033690 GO:GO:0045662
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
IPI:IPI00593054 OMA:DQSHGSP GO:GO:0072034 EMBL:AADN02023690
Ensembl:ENSGALT00000008449 Uniprot:F1P1Z5
Length = 470
Score = 224 (83.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 109 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQ 168
Query: 143 HMKEH 147
H K+H
Sbjct: 169 HKKDH 173
>UNIPROTKB|P57074 [details] [associations]
symbol:SOX8 "Transcription factor SOX-8" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003170 "heart valve
development" evidence=IEP] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEP] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0048709 GO:GO:0003170 HOGENOM:HOG000108876 HOVERGEN:HBG002061
KO:K09270 InterPro:IPR022151 Pfam:PF12444 EMBL:AF228664
IPI:IPI00593054 RefSeq:NP_990062.1 UniGene:Gga.4309
ProteinModelPortal:P57074 SMR:P57074 GeneID:395483 KEGG:gga:395483
CTD:30812 eggNOG:NOG324597 InParanoid:P57074 OrthoDB:EOG4ZKJMD
NextBio:20815563 Uniprot:P57074
Length = 470
Score = 224 (83.9 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LL+E KRPF++EA+RLR
Sbjct: 109 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLSENEKRPFVEEAERLRVQ 168
Query: 143 HMKEH 147
H K+H
Sbjct: 169 HKKDH 173
>UNIPROTKB|B3DLD3 [details] [associations]
symbol:sox18 "Transcription factor Sox-18" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0007507 "heart development" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0006355 GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:54345
EMBL:BC167402 RefSeq:NP_001123409.1 UniGene:Str.78926
GeneID:100170185 KEGG:xtr:100170185 Xenbase:XB-GENE-483233
Uniprot:B3DLD3
Length = 362
Score = 220 (82.5 bits), Expect = 6.8e-18, P = 6.8e-18
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK L+ KRPF++EA+RLR
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLSSAEKRPFVEEAERLRV 126
Query: 142 VHMKEH 147
H+++H
Sbjct: 127 QHLQDH 132
>ZFIN|ZDB-GENE-980526-466 [details] [associations]
symbol:sox11b "SRY-box containing gene 11b"
species:7955 "Danio rerio" [GO:0009611 "response to wounding"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-980526-466
GO:GO:0009611 GO:GO:0030182 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 HOVERGEN:HBG005040
InterPro:IPR017386 PIRSF:PIRSF038098 HSSP:P48432 EMBL:U85091
IPI:IPI00486894 UniGene:Dr.77148 ProteinModelPortal:Q9YH22
SMR:Q9YH22 Uniprot:Q9YH22
Length = 368
Score = 220 (82.5 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 42 ATGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 101
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 102 LRLQHMADY 110
>UNIPROTKB|Q90ZH7 [details] [associations]
symbol:sox18-b "Transcription factor Sox-18B" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=IMP] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0007507 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0030178 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270
EMBL:AB052693 EMBL:BC072123 RefSeq:NP_001082104.1 UniGene:Xl.11959
ProteinModelPortal:Q90ZH7 SMR:Q90ZH7 GeneID:398227 KEGG:xla:398227
CTD:398227 Xenbase:XB-GENE-6251810 Uniprot:Q90ZH7
Length = 361
Score = 219 (82.2 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK L KRPF++EA+RLR
Sbjct: 65 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRV 124
Query: 142 VHMKEH 147
H+++H
Sbjct: 125 QHLQDH 130
>UNIPROTKB|E2RLZ6 [details] [associations]
symbol:SOX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000761 "positive regulation of N-terminal
peptidyl-lysine acetylation" evidence=IEA] [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0060993 "kidney morphogenesis" evidence=IEA]
[GO:0060563 "neuroepithelial cell differentiation" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042769 "DNA damage response, detection
of DNA damage" evidence=IEA] [GO:0035910 "ascending aorta
morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0031018 "endocrine
pancreas development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0021782 "glial cell development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0014009 "glial cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0006977 "DNA damage
response, signal transduction by p53 class mediator resulting in
cell cycle arrest" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0003289
"atrial septum primum morphogenesis" evidence=IEA] [GO:0003215
"cardiac right ventricle morphogenesis" evidence=IEA] [GO:0003211
"cardiac ventricle formation" evidence=IEA] [GO:0003183 "mitral
valve morphogenesis" evidence=IEA] [GO:0002328 "pro-B cell
differentiation" evidence=IEA] [GO:0001841 "neural tube formation"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
GO:GO:0008284 GO:GO:0045944 GO:GO:0032024 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043065 GO:GO:0021522 GO:GO:0014009 GO:GO:0001501
GO:GO:0003289 GO:GO:0003183 GO:GO:0035019 GO:GO:0060993
GO:GO:0031018 GO:GO:0045727 GO:GO:0090263 GO:GO:0001105
GO:GO:0048485 GO:GO:0060070 GO:GO:0031397 GO:GO:0060563
GO:GO:0046826 GO:GO:0001046 GO:GO:0030217 GO:GO:0001841
GO:GO:0060412 GO:GO:0060174 GO:GO:0042769 GO:GO:0002328
GO:GO:0003215 GO:GO:0021782 GO:GO:0003357 GO:GO:0035910
GO:GO:0003211 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 OMA:AGCSPDG GO:GO:2000761
EMBL:AAEX03017587 EMBL:AAEX03017588 EMBL:AAEX03017589
Ensembl:ENSCAFT00000038483 Uniprot:E2RLZ6
Length = 356
Score = 218 (81.8 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLQDSDKIPFIREAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>UNIPROTKB|Q90ZH8 [details] [associations]
symbol:sox18-a "Transcription factor Sox-18A" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0006355 GO:GO:0043565 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
KO:K09270 EMBL:AB052692 EMBL:BC169575 RefSeq:NP_001082102.1
UniGene:Xl.11958 ProteinModelPortal:Q90ZH8 SMR:Q90ZH8 GeneID:398226
KEGG:xla:398226 CTD:398226 Xenbase:XB-GENE-864957 Uniprot:Q90ZH8
Length = 363
Score = 218 (81.8 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK L KRPF++EA+RLR
Sbjct: 67 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSVEKRPFVEEAERLRV 126
Query: 142 VHMKEH 147
H+++H
Sbjct: 127 QHLQDH 132
>UNIPROTKB|P40667 [details] [associations]
symbol:P40667 "SRY-related protein CH3" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000979 GO:GO:0001106 eggNOG:NOG321816
EMBL:M86322 IPI:IPI00601658 UniGene:Gga.3795
ProteinModelPortal:P40667 SMR:P40667 STRING:P40667
Ensembl:ENSGALT00000039603 GeneTree:ENSGT00690000101940
InParanoid:P40667 OrthoDB:EOG45MN6C ArrayExpress:P40667
Uniprot:P40667
Length = 54
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MAQ+NPKMHNSEISKRLGA+WKLL++ KRPFIDEAKRLRAVHMKE+
Sbjct: 1 MAQENPKMHNSEISKRLGADWKLLSDAEKRPFIDEAKRLRAVHMKEY 47
>UNIPROTKB|F6RRS7 [details] [associations]
symbol:SOX18 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072091 "regulation of stem cell proliferation"
evidence=IEA] [GO:0061028 "establishment of endothelial barrier"
evidence=IEA] [GO:0060956 "endocardial cell differentiation"
evidence=IEA] [GO:0060836 "lymphatic endothelial cell
differentiation" evidence=IEA] [GO:0060214 "endocardium formation"
evidence=IEA] [GO:0048866 "stem cell fate specification"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043534 "blood vessel endothelial cell migration"
evidence=IEA] [GO:0035050 "embryonic heart tube development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001946 "lymphangiogenesis" evidence=IEA]
[GO:0001942 "hair follicle development" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
GO:GO:0003700 GO:GO:0001525 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0001942
GO:GO:0001946 GO:GO:0060836 GO:GO:0043534 GO:GO:0001570
GO:GO:0048469 GO:GO:0035050 GO:GO:0072091 GO:GO:0060956
GO:GO:0060214 GO:GO:0061028 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 GO:GO:0048866
OMA:YLNCSRT EMBL:DAAA02036216 EMBL:DAAA02036215 IPI:IPI00717042
Ensembl:ENSBTAT00000015485 Uniprot:F6RRS7
Length = 388
Score = 219 (82.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 35/66 (53%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++AQ NP +HN+ +SK LG WK L+ KRPF++EA+RLR
Sbjct: 83 RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGKAWKELSPAEKRPFVEEAERLRV 142
Query: 142 VHMKEH 147
H+++H
Sbjct: 143 QHLRDH 148
>MGI|MGI:98359 [details] [associations]
symbol:Sox11 "SRY-box containing gene 11" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=ISO] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;IDA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO;IDA] [GO:0001158 "enhancer sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0001841 "neural tube formation"
evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
evidence=IMP] [GO:0003151 "outflow tract morphogenesis"
evidence=IMP] [GO:0003211 "cardiac ventricle formation"
evidence=IMP] [GO:0003357 "noradrenergic neuron differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006412
"translation" evidence=ISO] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISO] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0010628 "positive regulation
of gene expression" evidence=ISO;IMP] [GO:0010629 "negative
regulation of gene expression" evidence=ISO;IMP] [GO:0014009 "glial
cell proliferation" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0021510 "spinal cord development"
evidence=IMP] [GO:0021782 "glial cell development" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030513
"positive regulation of BMP signaling pathway" evidence=IMP]
[GO:0035332 "positive regulation of hippo signaling cascade"
evidence=IMP] [GO:0035914 "skeletal muscle cell differentiation"
evidence=IMP] [GO:0045666 "positive regulation of neuron
differentiation" evidence=ISO;IDA;IMP] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=ISO] [GO:0045778
"positive regulation of ossification" evidence=ISO;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IDA;IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0046887
"positive regulation of hormone secretion" evidence=IMP]
[GO:0048485 "sympathetic nervous system development" evidence=IMP]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IMP]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0050672 "negative regulation of lymphocyte proliferation"
evidence=ISO] [GO:0050769 "positive regulation of neurogenesis"
evidence=IDA] [GO:0060022 "hard palate development" evidence=IMP]
[GO:0060023 "soft palate development" evidence=IMP] [GO:0060174
"limb bud formation" evidence=IMP] [GO:0060253 "negative regulation
of glial cell proliferation" evidence=ISO;IMP] [GO:0060412
"ventricular septum morphogenesis" evidence=IMP] [GO:0060425 "lung
morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IMP] [GO:0061029 "eyelid development in
camera-type eye" evidence=IMP] [GO:0061053 "somite development"
evidence=IMP] [GO:0061303 "cornea development in camera-type eye"
evidence=IMP] [GO:0061386 "closure of optic fissure" evidence=IMP]
[GO:2000648 "positive regulation of stem cell proliferation"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISO] [GO:2001111 "positive
regulation of lens epithelial cell proliferation" evidence=IMP]
InterPro:IPR009071 MGI:MGI:98359 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0008135 GO:GO:0003705 GO:GO:0001077
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822 GO:GO:0050769
GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
GO:GO:0035914 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
GO:GO:2000678 GO:GO:0021782 GO:GO:0003357 GO:GO:0061053
GO:GO:0003211 CTD:6664 HOVERGEN:HBG005040 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 eggNOG:NOG130659
HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 EMBL:AF009414
EMBL:AB108675 EMBL:BK001484 EMBL:AK165693 EMBL:AK146514
EMBL:BC062095 EMBL:Z18960 IPI:IPI00556698 RefSeq:NP_033260.4
UniGene:Mm.41702 UniGene:Mm.466344 ProteinModelPortal:Q7M6Y2
SMR:Q7M6Y2 STRING:Q7M6Y2 PhosphoSite:Q7M6Y2 PRIDE:Q7M6Y2
Ensembl:ENSMUST00000079063 GeneID:20666 KEGG:mmu:20666
UCSC:uc007nfn.2 GeneTree:ENSGT00690000101789 InParanoid:Q7M6Y2
NextBio:299129 Bgee:Q7M6Y2 CleanEx:MM_SOX11 Genevestigator:Q7M6Y2
GermOnline:ENSMUSG00000063632 Uniprot:Q7M6Y2
Length = 395
Score = 219 (82.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 45 ASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 104
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 105 LRLKHMADY 113
>RGD|69351 [details] [associations]
symbol:Sox11 "SRY (sex determining region Y)-box 11" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=IEA;ISO]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO;ISS] [GO:0001501
"skeletal system development" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=IEP] [GO:0001841 "neural tube formation"
evidence=ISO;ISS] [GO:0002089 "lens morphogenesis in camera-type
eye" evidence=ISO;ISS] [GO:0003151 "outflow tract morphogenesis"
evidence=ISO;ISS] [GO:0003211 "cardiac ventricle formation"
evidence=ISO;ISS] [GO:0003357 "noradrenergic neuron differentiation"
evidence=ISO;IMP] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006412 "translation" evidence=ISO]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=ISO;ISS] [GO:0008283 "cell proliferation" evidence=IEP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISO;ISS] [GO:0010628 "positive regulation of gene
expression" evidence=ISO;ISS] [GO:0010629 "negative regulation of
gene expression" evidence=ISO;ISS] [GO:0014003 "oligodendrocyte
development" evidence=IEP] [GO:0014009 "glial cell proliferation"
evidence=ISO;ISS] [GO:0014032 "neural crest cell development"
evidence=ISO;ISS] [GO:0017015 "regulation of transforming growth
factor beta receptor signaling pathway" evidence=IEA;ISO]
[GO:0021510 "spinal cord development" evidence=ISO;ISS] [GO:0021782
"glial cell development" evidence=ISO;ISS] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030513 "positive regulation of
BMP signaling pathway" evidence=ISO;ISS] [GO:0035332 "positive
regulation of hippo signaling cascade" evidence=ISO;ISS] [GO:0035914
"skeletal muscle cell differentiation" evidence=ISO] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISO;ISS]
[GO:0045669 "positive regulation of osteoblast differentiation"
evidence=ISO;ISS] [GO:0045778 "positive regulation of ossification"
evidence=ISO;ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IMP]
[GO:0046887 "positive regulation of hormone secretion"
evidence=ISO;ISS] [GO:0048485 "sympathetic nervous system
development" evidence=ISO;ISS] [GO:0048557 "embryonic digestive
tract morphogenesis" evidence=ISO;ISS] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISO;ISS] [GO:0050672
"negative regulation of lymphocyte proliferation" evidence=IEA;ISO]
[GO:0050769 "positive regulation of neurogenesis" evidence=ISO;ISS]
[GO:0060022 "hard palate development" evidence=ISO;ISS] [GO:0060023
"soft palate development" evidence=ISO;ISS] [GO:0060174 "limb bud
formation" evidence=ISO;ISS] [GO:0060253 "negative regulation of
glial cell proliferation" evidence=ISO;ISS] [GO:0060412 "ventricular
septum morphogenesis" evidence=ISO;ISS] [GO:0060425 "lung
morphogenesis" evidence=ISO;ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISO;ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISO;ISS] [GO:0061029 "eyelid development
in camera-type eye" evidence=ISO;ISS] [GO:0061053 "somite
development" evidence=ISO;ISS] [GO:0061303 "cornea development in
camera-type eye" evidence=ISO;ISS] [GO:0061386 "closure of optic
fissure" evidence=ISO;ISS] [GO:0072395 "signal transduction involved
in cell cycle checkpoint" evidence=ISO] [GO:2000648 "positive
regulation of stem cell proliferation" evidence=ISO;ISS] [GO:2000678
"negative regulation of transcription regulatory region DNA binding"
evidence=IMP] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=ISO;ISS] InterPro:IPR009071
Pfam:PF00505 RGD:69351 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0001822
GO:GO:0050769 GO:GO:0030513 GO:GO:0045669 GO:GO:0045666
GO:GO:0060548 GO:GO:0021510 GO:GO:0014032 GO:GO:0048704
GO:GO:0001105 GO:GO:0000979 GO:GO:0061303 GO:GO:0061029
GO:GO:0003151 GO:GO:0048485 GO:GO:0001158 GO:GO:0014003
GO:GO:0060563 GO:GO:0045778 GO:GO:0001841 GO:GO:0017015
GO:GO:0002089 GO:GO:0060412 GO:GO:0046887 GO:GO:0060174
GO:GO:0060023 GO:GO:0060022 GO:GO:2000648 GO:GO:0060253
GO:GO:0048557 GO:GO:0060425 GO:GO:0061386 GO:GO:0050672
GO:GO:2000678 GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
eggNOG:NOG130659 HOGENOM:HOG000231874 OMA:TEEGEFM OrthoDB:EOG4QVCCX
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
GeneTree:ENSGT00690000101789 EMBL:AJ004858 IPI:IPI00202666
RefSeq:NP_445801.1 UniGene:Rn.162854 ProteinModelPortal:P0C1G9
SMR:P0C1G9 STRING:P0C1G9 Ensembl:ENSRNOT00000045963 GeneID:84046
KEGG:rno:84046 InParanoid:P0C1G9 NextBio:616629
Genevestigator:P0C1G9 Uniprot:P0C1G9
Length = 395
Score = 219 (82.2 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 45 ASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 104
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 105 LRLKHMADY 113
>UNIPROTKB|G3MYL8 [details] [associations]
symbol:G3MYL8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000761 "positive regulation of N-terminal
peptidyl-lysine acetylation" evidence=IEA] [GO:0090263 "positive
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071333 "cellular response to glucose stimulus"
evidence=IEA] [GO:0060993 "kidney morphogenesis" evidence=IEA]
[GO:0060563 "neuroepithelial cell differentiation" evidence=IEA]
[GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
[GO:0060174 "limb bud formation" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0048485
"sympathetic nervous system development" evidence=IEA] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042769 "DNA damage response, detection
of DNA damage" evidence=IEA] [GO:0035910 "ascending aorta
morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0032024 "positive regulation of
insulin secretion" evidence=IEA] [GO:0031397 "negative regulation
of protein ubiquitination" evidence=IEA] [GO:0031018 "endocrine
pancreas development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0021782 "glial cell development"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0014009 "glial cell
proliferation" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0006977 "DNA damage
response, signal transduction by p53 class mediator resulting in
cell cycle arrest" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0003289
"atrial septum primum morphogenesis" evidence=IEA] [GO:0003215
"cardiac right ventricle morphogenesis" evidence=IEA] [GO:0003211
"cardiac ventricle formation" evidence=IEA] [GO:0003183 "mitral
valve morphogenesis" evidence=IEA] [GO:0002328 "pro-B cell
differentiation" evidence=IEA] [GO:0001841 "neural tube formation"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
GO:GO:0008284 GO:GO:0045944 GO:GO:0032024 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0043065 GO:GO:0021522 GO:GO:0014009 GO:GO:0001501
GO:GO:0003289 GO:GO:0003183 GO:GO:0035019 GO:GO:0060993
GO:GO:0031018 GO:GO:0045727 GO:GO:0090263 GO:GO:0001105
GO:GO:0048485 GO:GO:0060070 GO:GO:0031397 GO:GO:0060563
GO:GO:0046826 GO:GO:0001046 GO:GO:0030217 GO:GO:0001841
GO:GO:0060412 GO:GO:0060174 GO:GO:0042769 GO:GO:0002328
GO:GO:0003215 GO:GO:0021782 GO:GO:0003357 GO:GO:0035910
GO:GO:0003211 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 OMA:AGCSPDG GO:GO:2000761
EMBL:DAAA02055577 EMBL:DAAA02055578 Ensembl:ENSBTAT00000064038
Uniprot:G3MYL8
Length = 378
Score = 218 (81.8 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>MGI|MGI:98366 [details] [associations]
symbol:Sox4 "SRY-box containing gene 4" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;IDA] [GO:0001077 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO;IDA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IDA] [GO:0001501 "skeletal system
development" evidence=IMP] [GO:0001666 "response to hypoxia"
evidence=ISO] [GO:0001841 "neural tube formation" evidence=IMP]
[GO:0002328 "pro-B cell differentiation" evidence=IMP] [GO:0003183
"mitral valve morphogenesis" evidence=IMP] [GO:0003211 "cardiac
ventricle formation" evidence=IMP] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IMP] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IMP] [GO:0003357 "noradrenergic
neuron differentiation" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=ISO] [GO:0007507
"heart development" evidence=IMP] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO;IMP] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0014009 "glial
cell proliferation" evidence=IMP] [GO:0021510 "spinal cord
development" evidence=IMP] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021782 "glial cell development"
evidence=IMP] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0030217 "T cell
differentiation" evidence=IMP] [GO:0031018 "endocrine pancreas
development" evidence=IMP] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0032024 "positive regulation
of insulin secretion" evidence=IMP] [GO:0035019 "somatic stem cell
maintenance" evidence=IDA] [GO:0035910 "ascending aorta
morphogenesis" evidence=IMP] [GO:0042593 "glucose homeostasis"
evidence=IMP] [GO:0042769 "DNA damage response, detection of DNA
damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0046826 "negative regulation of
protein export from nucleus" evidence=ISO] [GO:0048485 "sympathetic
nervous system development" evidence=IMP] [GO:0050821 "protein
stabilization" evidence=ISO;IMP] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:0060174 "limb bud
formation" evidence=IMP] [GO:0060412 "ventricular septum
morphogenesis" evidence=IMP] [GO:0060548 "negative regulation of
cell death" evidence=IMP] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IMP] [GO:0060993 "kidney morphogenesis"
evidence=IMP] [GO:0071333 "cellular response to glucose stimulus"
evidence=IMP] [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] [GO:2000761 "positive
regulation of N-terminal peptidyl-lysine acetylation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98366 Pfam:PF00505 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
GO:GO:0001841 EMBL:CH466561 GO:GO:0060412 GO:GO:0060174
GO:GO:0042769 GO:GO:0002328 GO:GO:0003215 GO:GO:0021782
GO:GO:0003357 GO:GO:0035910 GO:GO:0003211 HOVERGEN:HBG005040
KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098 HOGENOM:HOG000231874
GeneTree:ENSGT00690000101789 CTD:6659 OMA:AGCSPDG ChiTaRS:SOX4
GO:GO:2000761 EMBL:X70298 EMBL:AL606511 EMBL:BC052736 EMBL:U70440
IPI:IPI00320363 PIR:S37303 RefSeq:NP_033264.2 UniGene:Mm.240627
UniGene:Mm.455819 PDB:3U2B PDBsum:3U2B ProteinModelPortal:Q06831
SMR:Q06831 IntAct:Q06831 STRING:Q06831 PhosphoSite:Q06831
PRIDE:Q06831 Ensembl:ENSMUST00000067230 GeneID:20677 KEGG:mmu:20677
InParanoid:Q5SW95 NextBio:299169 Bgee:Q06831 CleanEx:MM_SOX4
Genevestigator:Q06831 Uniprot:Q06831
Length = 440
Score = 220 (82.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>RGD|1309488 [details] [associations]
symbol:Sox4 "SRY (sex determining region Y)-box 4" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=IDA]
[GO:0001841 "neural tube formation" evidence=ISO] [GO:0002328
"pro-B cell differentiation" evidence=ISO] [GO:0003183 "mitral
valve morphogenesis" evidence=ISO] [GO:0003211 "cardiac ventricle
formation" evidence=ISO] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=ISO] [GO:0003289 "atrial septum primum
morphogenesis" evidence=ISO] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISO] [GO:0007507 "heart
development" evidence=ISO] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0008285 "negative regulation of
cell proliferation" evidence=ISO] [GO:0014009 "glial cell
proliferation" evidence=ISO] [GO:0021510 "spinal cord development"
evidence=ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021782 "glial cell development"
evidence=ISO] [GO:0030177 "positive regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0030217 "T cell
differentiation" evidence=ISO] [GO:0031018 "endocrine pancreas
development" evidence=ISO] [GO:0031397 "negative regulation of
protein ubiquitination" evidence=ISO] [GO:0031647 "regulation of
protein stability" evidence=ISO] [GO:0032024 "positive regulation
of insulin secretion" evidence=ISO] [GO:0035019 "somatic stem cell
maintenance" evidence=ISO] [GO:0035910 "ascending aorta
morphogenesis" evidence=ISO] [GO:0042593 "glucose homeostasis"
evidence=ISO] [GO:0042769 "DNA damage response, detection of DNA
damage" evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046826 "negative regulation of protein export
from nucleus" evidence=ISO] [GO:0048485 "sympathetic nervous system
development" evidence=ISO] [GO:0050821 "protein stabilization"
evidence=ISO] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=ISO] [GO:0060174 "limb bud formation"
evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
evidence=ISO] [GO:0060548 "negative regulation of cell death"
evidence=ISO] [GO:0060563 "neuroepithelial cell differentiation"
evidence=ISO] [GO:0060993 "kidney morphogenesis" evidence=ISO]
[GO:0071333 "cellular response to glucose stimulus" evidence=ISO]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISO] [GO:2000761 "positive regulation
of N-terminal peptidyl-lysine acetylation" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] NCBI:NP_001258134
REFSEQ:NM_001271205
Length = 440
Score = 220 (82.5 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIQEAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>ZFIN|ZDB-GENE-011207-1 [details] [associations]
symbol:sox10 "SRY-box containing gene 10"
species:7955 "Danio rerio" [GO:0014044 "Schwann cell development"
evidence=IMP] [GO:0048840 "otolith development" evidence=IMP]
[GO:0048839 "inner ear development" evidence=IGI;IMP] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI] [GO:0001755
"neural crest cell migration" evidence=IMP] [GO:0048484 "enteric
nervous system development" evidence=IMP] [GO:0010001 "glial cell
differentiation" evidence=IGI] [GO:0071600 "otic vesicle
morphogenesis" evidence=IMP] [GO:0030318 "melanocyte
differentiation" evidence=IGI] [GO:0048709 "oligodendrocyte
differentiation" evidence=IMP] [GO:0014037 "Schwann cell
differentiation" evidence=IMP] [GO:0050768 "negative regulation of
neurogenesis" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011207-1 GO:GO:0001755 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0010628
GO:GO:0014044 GO:GO:0030318 GO:GO:0048709 GO:GO:0050768
GO:GO:0048484 GO:GO:0048840 GO:GO:0048752 GO:GO:0071600 CTD:6663
GeneTree:ENSGT00670000097649 HOGENOM:HOG000108876
HOVERGEN:HBG002061 KO:K09270 OMA:GPSMASD InterPro:IPR022151
Pfam:PF12444 HSSP:P48432 EMBL:CU695115 EMBL:BC163868 EMBL:BC163883
EMBL:AF402677 IPI:IPI00512024 RefSeq:NP_571950.1 UniGene:Dr.83682
SMR:Q90XD1 STRING:Q90XD1 Ensembl:ENSDART00000112979 GeneID:140616
KEGG:dre:140616 NextBio:20797027 Uniprot:Q90XD1
Length = 485
Score = 221 (82.9 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W+LLNE KRPFI+EA+RLR
Sbjct: 108 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNETDKRPFIEEAERLRKQ 167
Query: 143 HMKEH 147
H K++
Sbjct: 168 HKKDY 172
>UNIPROTKB|E2R0K1 [details] [associations]
symbol:SOX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072197 "ureter morphogenesis" evidence=ISS]
[GO:0048709 "oligodendrocyte differentiation" evidence=ISS]
[GO:0033690 "positive regulation of osteoblast proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048484 "enteric nervous system
development" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0014015 "positive regulation
of gliogenesis" evidence=ISS] [GO:0000979 "RNA polymerase II core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0001755
"neural crest cell migration" evidence=ISS] [GO:0072289
"metanephric nephron tubule formation" evidence=ISS] [GO:0061138
"morphogenesis of a branching epithelium" evidence=ISS] [GO:0060612
"adipose tissue development" evidence=ISS] [GO:0060221 "retinal rod
cell differentiation" evidence=ISS] [GO:0060041 "retina development
in camera-type eye" evidence=ISS] [GO:0060009 "Sertoli cell
development" evidence=ISS] [GO:0045662 "negative regulation of
myoblast differentiation" evidence=ISS] [GO:0045165 "cell fate
commitment" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0010817 "regulation of hormone levels"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0007422 "peripheral nervous system development" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0001649 "osteoblast
differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0090184
"positive regulation of kidney development" evidence=ISS]
[GO:0072034 "renal vesicle induction" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0007165 "signal transduction" evidence=ISS] [GO:0060018
"astrocyte fate commitment" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0007165 GO:GO:0045893
GO:GO:0043066 GO:GO:0001755 GO:GO:0001701 GO:GO:0045944
GO:GO:0007422 GO:GO:0060612 GO:GO:0003700 GO:GO:0007283
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0060009 GO:GO:0090190 GO:GO:0001649 GO:GO:0045444
GO:GO:0000979 GO:GO:0048709 GO:GO:0048484 GO:GO:0010817
GO:GO:0048469 GO:GO:0033690 GO:GO:0045662 GO:GO:0046533
GO:GO:0060018 GO:GO:0014015 GO:GO:0072289 GO:GO:0072197
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:0061138 GO:GO:0072034 GO:GO:0060221 EMBL:AAEX03004665
EMBL:AAEX03004666 Ensembl:ENSCAFT00000031157 Uniprot:E2R0K1
Length = 462
Score = 220 (82.5 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW++ RRK+A P +HN+E+SK LG W LL+E KRPF++EA+RLR
Sbjct: 102 VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWGLLSESEKRPFVEEAERLRVQ 161
Query: 143 HMKEH 147
H K+H
Sbjct: 162 HKKDH 166
>UNIPROTKB|P35716 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9606
"Homo sapiens" [GO:0001822 "kidney development" evidence=IEA]
[GO:0014003 "oligodendrocyte development" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008135 "translation factor activity,
nucleic acid binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000979 "RNA polymerase II core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0001841 "neural tube formation" evidence=ISS]
[GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0014009
"glial cell proliferation" evidence=ISS] [GO:0014032 "neural crest
cell development" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0021782 "glial cell development"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0035332 "positive regulation of
hippo signaling cascade" evidence=ISS] [GO:0046887 "positive
regulation of hormone secretion" evidence=ISS] [GO:0060174 "limb
bud formation" evidence=ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0061053 "somite development"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IDA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:2000678 "negative regulation of
transcription regulatory region DNA binding" evidence=ISS]
[GO:0017015 "regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEP] [GO:0045778 "positive regulation
of ossification" evidence=IMP] [GO:0045669 "positive regulation of
osteoblast differentiation" evidence=IMP] [GO:2000648 "positive
regulation of stem cell proliferation" evidence=IMP] [GO:0072395
"signal transduction involved in cell cycle checkpoint"
evidence=IEP] [GO:0060253 "negative regulation of glial cell
proliferation" evidence=IMP] [GO:0045666 "positive regulation of
neuron differentiation" evidence=IMP] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0010628 "positive
regulation of gene expression" evidence=IMP] [GO:0050672 "negative
regulation of lymphocyte proliferation" evidence=IMP] [GO:0003151
"outflow tract morphogenesis" evidence=ISS] [GO:0048557 "embryonic
digestive tract morphogenesis" evidence=ISS] [GO:0048704 "embryonic
skeletal system morphogenesis" evidence=ISS] [GO:0060022 "hard
palate development" evidence=ISS] [GO:0060023 "soft palate
development" evidence=ISS] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISS] [GO:0060425 "lung morphogenesis"
evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
evidence=ISS] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=ISS]
[GO:0030513 "positive regulation of BMP signaling pathway"
evidence=ISS] [GO:0061303 "cornea development in camera-type eye"
evidence=ISS] [GO:0061386 "closure of optic fissure" evidence=ISS]
[GO:0050769 "positive regulation of neurogenesis" evidence=ISS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISS] [GO:0048485 "sympathetic nervous
system development" evidence=ISS] [GO:0006412 "translation"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0008135 GO:GO:0001077 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0014009 GO:GO:0001822 GO:GO:0050769 GO:GO:0030513
GO:GO:0045669 GO:GO:0045666 GO:GO:0060548 GO:GO:0021510
GO:GO:0014032 GO:GO:0048704 GO:GO:0001105 GO:GO:0000979
GO:GO:0061303 GO:GO:0061029 GO:GO:0003151 GO:GO:0048485
GO:GO:0001158 GO:GO:0014003 GO:GO:0060563 GO:GO:0045778
GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 CTD:6664
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
EMBL:U23752 EMBL:AB028641 EMBL:AC108025 EMBL:X73038 IPI:IPI00020435
PIR:G01758 PIR:S34118 RefSeq:NP_003099.1 UniGene:Hs.432638
ProteinModelPortal:P35716 SMR:P35716 STRING:P35716
PhosphoSite:P35716 DMDM:1351142 PaxDb:P35716 PRIDE:P35716
DNASU:6664 Ensembl:ENST00000322002 GeneID:6664 KEGG:hsa:6664
UCSC:uc002qyj.3 GeneCards:GC02P005834 HGNC:HGNC:11191 HPA:CAB009378
HPA:CAB056152 HPA:HPA000536 MIM:600898 neXtProt:NX_P35716
PharmGKB:PA36028 eggNOG:NOG130659 HOGENOM:HOG000231874
InParanoid:P35716 OMA:TEEGEFM OrthoDB:EOG4QVCCX ChiTaRS:SOX11
GenomeRNAi:6664 NextBio:25981 ArrayExpress:P35716 Bgee:P35716
CleanEx:HS_SOX11 Genevestigator:P35716 GermOnline:ENSG00000176887
GO:GO:0035332 GO:GO:2001111 GO:GO:0072404 Uniprot:P35716
Length = 441
Score = 219 (82.2 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 45 ASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 104
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 105 LRLKHMADY 113
>UNIPROTKB|F1S9L1 [details] [associations]
symbol:SOX11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=ISS] [GO:0061053 "somite
development" evidence=ISS] [GO:0035332 "positive regulation of
hippo signaling cascade" evidence=ISS] [GO:0021782 "glial cell
development" evidence=ISS] [GO:0003211 "cardiac ventricle
formation" evidence=ISS] [GO:2001111 "positive regulation of lens
epithelial cell proliferation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008135 "translation factor activity,
nucleic acid binding" evidence=ISS] [GO:0050769 "positive
regulation of neurogenesis" evidence=ISS] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISS] [GO:0061386
"closure of optic fissure" evidence=ISS] [GO:0061303 "cornea
development in camera-type eye" evidence=ISS] [GO:0030513 "positive
regulation of BMP signaling pathway" evidence=ISS] [GO:0002089
"lens morphogenesis in camera-type eye" evidence=ISS] [GO:0061029
"eyelid development in camera-type eye" evidence=ISS] [GO:0060425
"lung morphogenesis" evidence=ISS] [GO:0060412 "ventricular septum
morphogenesis" evidence=ISS] [GO:0060023 "soft palate development"
evidence=ISS] [GO:0060022 "hard palate development" evidence=ISS]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=ISS]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=ISS] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISS] [GO:0045669 "positive regulation of osteoblast
differentiation" evidence=ISS] [GO:2000648 "positive regulation of
stem cell proliferation" evidence=ISS] [GO:0045778 "positive
regulation of ossification" evidence=ISS] [GO:0060253 "negative
regulation of glial cell proliferation" evidence=ISS] [GO:0010629
"negative regulation of gene expression" evidence=ISS] [GO:0010628
"positive regulation of gene expression" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0060548 "negative regulation of
cell death" evidence=ISS] [GO:0060174 "limb bud formation"
evidence=ISS] [GO:0048485 "sympathetic nervous system development"
evidence=ISS] [GO:0046887 "positive regulation of hormone
secretion" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0021510 "spinal cord
development" evidence=ISS] [GO:0014032 "neural crest cell
development" evidence=ISS] [GO:0014009 "glial cell proliferation"
evidence=ISS] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISS] [GO:0003357 "noradrenergic neuron
differentiation" evidence=ISS] [GO:0001841 "neural tube formation"
evidence=ISS] [GO:0001501 "skeletal system development"
evidence=ISS] [GO:0050672 "negative regulation of lymphocyte
proliferation" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0000979 "RNA polymerase II core promoter
sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0008135
GO:GO:0001077 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0014009 GO:GO:0050769
GO:GO:0030513 GO:GO:0045669 GO:GO:0045666 GO:GO:0060548
GO:GO:0021510 GO:GO:0014032 GO:GO:0048704 GO:GO:0001105
GO:GO:0000979 GO:GO:0061303 GO:GO:0061029 GO:GO:0003151
GO:GO:0048485 GO:GO:0001158 GO:GO:0060563 GO:GO:0045778
GO:GO:0001841 GO:GO:0017015 GO:GO:0002089 GO:GO:0060412
GO:GO:0046887 GO:GO:0060174 GO:GO:0060023 GO:GO:0060022
GO:GO:2000648 GO:GO:0060253 GO:GO:0048557 GO:GO:0060425
GO:GO:0061386 GO:GO:0050672 GO:GO:2000678 GO:GO:0021782
GO:GO:0003357 GO:GO:0061053 GO:GO:0003211 KO:K09268
InterPro:IPR017386 PIRSF:PIRSF038098 OMA:TEEGEFM GO:GO:0035332
GO:GO:2001111 GO:GO:0072404 GeneTree:ENSGT00690000101789
EMBL:FP245498 RefSeq:XP_003354985.1 Ensembl:ENSSSCT00000009462
GeneID:100514639 KEGG:ssc:100514639 Uniprot:F1S9L1
Length = 447
Score = 219 (82.2 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 79 AIDRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKR 138
A +KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+R
Sbjct: 45 ASGHIKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAER 104
Query: 139 LRAVHMKEH 147
LR HM ++
Sbjct: 105 LRLKHMADY 113
>MGI|MGI:98369 [details] [associations]
symbol:Sox7 "SRY-box containing gene 7" species:10090 "Mus
musculus" [GO:0001706 "endoderm formation" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0060828 "regulation
of canonical Wnt receptor signaling pathway" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98369 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043565 GO:GO:0003705
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 eggNOG:NOG242943 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
CTD:83595 OrthoDB:EOG447FTC EMBL:AB023419 EMBL:X65660
IPI:IPI00112869 PIR:S22945 RefSeq:NP_035576.1 UniGene:Mm.42162
ProteinModelPortal:P40646 SMR:P40646 STRING:P40646
PhosphoSite:P40646 PRIDE:P40646 Ensembl:ENSMUST00000079652
GeneID:20680 KEGG:mmu:20680 InParanoid:P40646 OMA:ECPALEA
NextBio:299185 Bgee:P40646 CleanEx:MM_SOX7 Genevestigator:P40646
GermOnline:ENSMUSG00000063060 Uniprot:P40646
Length = 380
Score = 216 (81.1 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L KRP++DEA+RLR
Sbjct: 44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRL 103
Query: 142 VHMKEH 147
HM+++
Sbjct: 104 QHMQDY 109
>UNIPROTKB|P40666 [details] [associations]
symbol:P40666 "SRY-related protein CH2" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG321816 EMBL:M86321
IPI:IPI00594121 PIR:I50191 ProteinModelPortal:P40666 SMR:P40666
STRING:P40666 InParanoid:P40666 Uniprot:P40666
Length = 54
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/47 (85%), Positives = 44/47 (93%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MAQ+NPKMHNSE+SKRLGAEWKLL+E KRPFIDEAKRLRA HMKE+
Sbjct: 1 MAQENPKMHNSEMSKRLGAEWKLLSEAEKRPFIDEAKRLRASHMKEY 47
>UNIPROTKB|P40668 [details] [associations]
symbol:P40668 "SRY-related protein CH4" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86325 IPI:IPI00600355
PIR:I50195 ProteinModelPortal:P40668 SMR:P40668 STRING:P40668
InParanoid:P40668 Uniprot:P40668
Length = 54
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 39/47 (82%), Positives = 45/47 (95%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MAQ+NPKMHNSEISKRLGAEWKLL+E KRPFID++KRLRA+HMKE+
Sbjct: 1 MAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDDSKRLRAMHMKEY 47
>UNIPROTKB|O42342 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8355
"Xenopus laevis" [GO:0001706 "endoderm formation" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS] [GO:0007507 "heart development"
evidence=IMP] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0048793 "pronephros development" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0030154 GO:GO:0043565 GO:GO:0045944 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0030178 GO:GO:0048793 GO:GO:0001706 HSSP:P48431
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516 KO:K09270 CTD:83595
EMBL:D83649 RefSeq:NP_001079337.1 UniGene:Xl.1241
ProteinModelPortal:O42342 SMR:O42342 GeneID:378665 KEGG:xla:378665
Xenbase:XB-GENE-865761 Uniprot:O42342
Length = 362
Score = 215 (80.7 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 34/66 (51%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L+ KRP+++EA+RLR
Sbjct: 41 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEEAERLRV 100
Query: 142 VHMKEH 147
HM+++
Sbjct: 101 QHMQDY 106
>UNIPROTKB|Q28GD5 [details] [associations]
symbol:sox7 "Transcription factor Sox-7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0001706 "endoderm formation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007507
"heart development" evidence=ISS] [GO:0043565 "sequence-specific
DNA binding" evidence=ISS] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISS] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0048793 "pronephros development" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0007507
GO:GO:0043565 GO:GO:0045944 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0001570 GO:GO:0048793 GO:GO:0001706 eggNOG:NOG242943
InterPro:IPR021934 Pfam:PF12067 PROSITE:PS51516
GeneTree:ENSGT00670000097649 KO:K09270 HOGENOM:HOG000069999
CTD:83595 OrthoDB:EOG447FTC EMBL:CR761431 EMBL:BC170859
RefSeq:NP_001016326.1 UniGene:Str.66419 ProteinModelPortal:Q28GD5
SMR:Q28GD5 STRING:Q28GD5 Ensembl:ENSXETT00000001530 GeneID:549080
KEGG:xtr:549080 Xenbase:XB-GENE-488067 OMA:SFECSAG Bgee:Q28GD5
Uniprot:Q28GD5
Length = 362
Score = 215 (80.7 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 34/66 (51%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L+ KRP+++EA+RLR
Sbjct: 41 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSPAQKRPYVEEAERLRV 100
Query: 142 VHMKEH 147
HM+++
Sbjct: 101 QHMQDY 106
>RGD|1310038 [details] [associations]
symbol:Sox7 "SRY (sex determining region Y)-box 7" species:10116
"Rattus norvegicus" [GO:0001706 "endoderm formation"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0060828
"regulation of canonical Wnt receptor signaling pathway"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1310038
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0043565
GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270 CTD:83595
OrthoDB:EOG447FTC OMA:ECPALEA EMBL:CH474023 IPI:IPI00373062
RefSeq:NP_001099515.1 UniGene:Rn.17732 Ensembl:ENSRNOT00000016503
GeneID:290317 KEGG:rno:290317 UCSC:RGD:1310038 NextBio:630913
Uniprot:D3ZTE1
Length = 383
Score = 216 (81.1 bits), Expect = 2.6e-17, P = 2.6e-17
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L KRP++DEA+RLR
Sbjct: 44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRL 103
Query: 142 VHMKEH 147
HM+++
Sbjct: 104 QHMQDY 109
>UNIPROTKB|Q9BT81 [details] [associations]
symbol:SOX7 "Transcription factor SOX-7" species:9606 "Homo
sapiens" [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0060828 "regulation of canonical
Wnt receptor signaling pathway" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0001706 "endoderm formation" evidence=IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0045892 GO:GO:0008285
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 KO:K09270 HOGENOM:HOG000069999 HOVERGEN:HBG000517
EMBL:AJ409320 EMBL:AK055556 EMBL:BT006693 EMBL:BC071947
IPI:IPI00027779 RefSeq:NP_113627.1 UniGene:Hs.709543
ProteinModelPortal:Q9BT81 SMR:Q9BT81 MINT:MINT-1186658
STRING:Q9BT81 PhosphoSite:Q9BT81 DMDM:20532272 PRIDE:Q9BT81
DNASU:83595 Ensembl:ENST00000304501 GeneID:83595 KEGG:hsa:83595
UCSC:uc003wtf.3 CTD:83595 GeneCards:GC08M010618 HGNC:HGNC:18196
HPA:HPA009065 MIM:612202 neXtProt:NX_Q9BT81 PharmGKB:PA38307
InParanoid:Q9BT81 OrthoDB:EOG447FTC PhylomeDB:Q9BT81 ChiTaRS:SOX7
GenomeRNAi:83595 NextBio:72529 ArrayExpress:Q9BT81 Bgee:Q9BT81
CleanEx:HS_SOX7 Genevestigator:Q9BT81 GermOnline:ENSG00000171056
Uniprot:Q9BT81
Length = 388
Score = 216 (81.1 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 35/66 (53%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L KRP++DEA+RLR
Sbjct: 44 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTLSQKRPYVDEAERLRL 103
Query: 142 VHMKEH 147
HM+++
Sbjct: 104 QHMQDY 109
>UNIPROTKB|Q06945 [details] [associations]
symbol:SOX4 "Transcription factor SOX-4" species:9606 "Homo
sapiens" [GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISS] [GO:0071333 "cellular response to glucose stimulus"
evidence=ISS] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=IMP] [GO:0042593 "glucose homeostasis" evidence=ISS]
[GO:0090263 "positive regulation of canonical Wnt receptor
signaling pathway" evidence=ISS] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0042769 "DNA damage response,
detection of DNA damage" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA;IMP]
[GO:0001841 "neural tube formation" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=ISS] [GO:0014009
"glial cell proliferation" evidence=ISS] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=ISS] [GO:0060174 "limb bud
formation" evidence=ISS] [GO:0060563 "neuroepithelial cell
differentiation" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0048485 "sympathetic nervous system development" evidence=ISS]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0031397 "negative
regulation of protein ubiquitination" evidence=IMP] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IMP]
[GO:2000761 "positive regulation of N-terminal peptidyl-lysine
acetylation" evidence=IDA] [GO:0006977 "DNA damage response, signal
transduction by p53 class mediator resulting in cell cycle arrest"
evidence=IMP] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0031647 "regulation of protein
stability" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0001501 "skeletal system development" evidence=ISS] [GO:0003211
"cardiac ventricle formation" evidence=ISS] [GO:0021510 "spinal
cord development" evidence=ISS] [GO:0021782 "glial cell
development" evidence=ISS] [GO:0060548 "negative regulation of cell
death" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
differentiation" evidence=ISS] [GO:0002328 "pro-B cell
differentiation" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0030177 "positive regulation
of Wnt receptor signaling pathway" evidence=ISS] [GO:0003289
"atrial septum primum morphogenesis" evidence=ISS] [GO:0003183
"mitral valve morphogenesis" evidence=ISS] [GO:0060412 "ventricular
septum morphogenesis" evidence=ISS] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=ISS] [GO:0060993 "kidney
morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
morphogenesis" evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005739 GO:GO:0005634 GO:GO:0043066
GO:GO:0008285 GO:GO:0050821 GO:GO:0006977 GO:GO:0071333
GO:GO:0008284 GO:GO:0032024 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0043065
GO:GO:0021522 GO:GO:0014009 GO:GO:0001501 GO:GO:0003289
GO:GO:0003183 GO:GO:0035019 GO:GO:0060993 GO:GO:0031018
GO:GO:0045727 GO:GO:0090263 GO:GO:0001105 GO:GO:0048485
GO:GO:0060070 GO:GO:0031397 GO:GO:0060563 GO:GO:0046826
GO:GO:0001046 GO:GO:0030217 GO:GO:0001841 GO:GO:0060412
GO:GO:0060174 GO:GO:0042769 GO:GO:0002328 GO:GO:0003215
GO:GO:0021782 GO:GO:0003357 GO:GO:0035910 GO:GO:0003211
HOVERGEN:HBG005040 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
eggNOG:NOG130659 HOGENOM:HOG000231874 OrthoDB:EOG41VK47 EMBL:X70683
EMBL:AL136179 EMBL:BC072668 EMBL:X65661 IPI:IPI00001617 PIR:I38240
RefSeq:NP_003098.1 UniGene:Hs.643910 ProteinModelPortal:Q06945
SMR:Q06945 DIP:DIP-58650N STRING:Q06945 PhosphoSite:Q06945
DMDM:548952 PaxDb:Q06945 PRIDE:Q06945 DNASU:6659
Ensembl:ENST00000244745 Ensembl:ENST00000543472 GeneID:6659
KEGG:hsa:6659 UCSC:uc003ndi.3 CTD:6659 GeneCards:GC06P021593
HGNC:HGNC:11200 HPA:HPA029901 MIM:184430 neXtProt:NX_Q06945
PharmGKB:PA36037 InParanoid:Q06945 OMA:AGCSPDG ChiTaRS:SOX4
GenomeRNAi:6659 NextBio:25959 Bgee:Q06945 CleanEx:HS_SOX4
Genevestigator:Q06945 GermOnline:ENSG00000124766 GO:GO:2000761
Uniprot:Q06945
Length = 474
Score = 218 (81.8 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>UNIPROTKB|F1RUF9 [details] [associations]
symbol:SOX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060174 "limb bud formation" evidence=ISS] [GO:0008284
"positive regulation of cell proliferation" evidence=ISS]
[GO:0002328 "pro-B cell differentiation" evidence=ISS] [GO:0060563
"neuroepithelial cell differentiation" evidence=ISS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0014009 "glial cell proliferation" evidence=ISS] [GO:0003357
"noradrenergic neuron differentiation" evidence=ISS] [GO:0001841
"neural tube formation" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0046826 "negative regulation of protein export
from nucleus" evidence=ISS] [GO:0031647 "regulation of protein
stability" evidence=ISS] [GO:2000761 "positive regulation of
N-terminal peptidyl-lysine acetylation" evidence=ISS] [GO:0006977
"DNA damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0007507 "heart development" evidence=ISS] [GO:0030217 "T cell
differentiation" evidence=ISS] [GO:0090263 "positive regulation of
canonical Wnt receptor signaling pathway" evidence=ISS] [GO:0042593
"glucose homeostasis" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060548 "negative regulation of cell
death" evidence=ISS] [GO:0021782 "glial cell development"
evidence=ISS] [GO:0021510 "spinal cord development" evidence=ISS]
[GO:0003211 "cardiac ventricle formation" evidence=ISS] [GO:0001501
"skeletal system development" evidence=ISS] [GO:0045727 "positive
regulation of translation" evidence=ISS] [GO:0042769 "DNA damage
response, detection of DNA damage" evidence=ISS] [GO:0031397
"negative regulation of protein ubiquitination" evidence=ISS]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISS] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISS] [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0000976 "transcription regulatory
region sequence-specific DNA binding" evidence=ISS] [GO:0048485
"sympathetic nervous system development" evidence=ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0050821 "protein stabilization"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0030177 "positive regulation
of Wnt receptor signaling pathway" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0071333 "cellular response to glucose
stimulus" evidence=ISS] [GO:0032024 "positive regulation of insulin
secretion" evidence=ISS] [GO:0060993 "kidney morphogenesis"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0035910 "ascending aorta morphogenesis"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0031018 "endocrine pancreas development"
evidence=IEA] [GO:0003289 "atrial septum primum morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003183 "mitral valve morphogenesis"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005739
GO:GO:0005634 GO:GO:0043066 GO:GO:0008285 GO:GO:0050821
GO:GO:0006977 GO:GO:0071333 GO:GO:0008284 GO:GO:0032024
GO:GO:0001077 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0043065 GO:GO:0021522 GO:GO:0014009
GO:GO:0001501 GO:GO:0003289 GO:GO:0003183 GO:GO:0035019
GO:GO:0060993 GO:GO:0031018 GO:GO:0045727 GO:GO:0090263
GO:GO:0001105 GO:GO:0048485 GO:GO:0060070 GO:GO:0031397
GO:GO:0060563 GO:GO:0046826 GO:GO:0001046 GO:GO:0030217
GO:GO:0001841 GO:GO:0060412 GO:GO:0060174 GO:GO:0042769
GO:GO:0002328 GO:GO:0003215 GO:GO:0021782 GO:GO:0003357
GO:GO:0035910 GO:GO:0003211 KO:K09268 InterPro:IPR017386
PIRSF:PIRSF038098 GeneTree:ENSGT00690000101789 OMA:AGCSPDG
GO:GO:2000761 EMBL:CT757489 RefSeq:XP_003128248.1
Ensembl:ENSSSCT00000001176 GeneID:100512542 KEGG:ssc:100512542
Uniprot:F1RUF9
Length = 477
Score = 218 (81.8 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + +P MHN+EISKRLG WKLL + K PFI EA+RLR
Sbjct: 59 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDSDKIPFIREAERLRLK 118
Query: 143 HMKEH 147
HM ++
Sbjct: 119 HMADY 123
>ZFIN|ZDB-GENE-040109-4 [details] [associations]
symbol:sox7 "SRY-box containing gene 7" species:7955
"Danio rerio" [GO:0001570 "vasculogenesis" evidence=IGI]
[GO:0048793 "pronephros development" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 ZFIN:ZDB-GENE-040109-4
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0001570 GO:GO:0048793 eggNOG:NOG242943 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
HOGENOM:HOG000069999 HOVERGEN:HBG000517 CTD:83595 OrthoDB:EOG447FTC
OMA:SFECSAG EMBL:BX510941 EMBL:BC075872 EMBL:AY423014
IPI:IPI00504949 RefSeq:NP_001074219.1 UniGene:Dr.151971
UniGene:Dr.27174 SMR:Q6TEN5 STRING:Q6TEN5
Ensembl:ENSDART00000044224 Ensembl:ENSDART00000130271 GeneID:394203
KEGG:dre:394203 InParanoid:Q6TEN5 NextBio:20815136 Uniprot:Q6TEN5
Length = 390
Score = 214 (80.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 34/66 (51%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L KRP+++EA+RLR
Sbjct: 42 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALTPPQKRPYVEEAERLRV 101
Query: 142 VHMKEH 147
HM+++
Sbjct: 102 QHMQDY 107
>UNIPROTKB|F1NFP0 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649
OMA:ECPALEA EMBL:AADN02018316 IPI:IPI00684202
Ensembl:ENSGALT00000026870 Uniprot:F1NFP0
Length = 397
Score = 214 (80.4 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 34/66 (51%), Positives = 53/66 (80%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+E+SK LG WK L+ KRP+++EA+RLR
Sbjct: 60 RIRRPMNAFMVWAKDERKRLAVQNPDLHNAELSKMLGKSWKALSLSQKRPYVEEAERLRV 119
Query: 142 VHMKEH 147
HM+++
Sbjct: 120 KHMQDY 125
>MGI|MGI:98360 [details] [associations]
symbol:Sox12 "SRY-box containing gene 12" species:10090 "Mus
musculus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0021510 "spinal cord development"
evidence=IDA] [GO:0032993 "protein-DNA complex" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0065004 "protein-DNA
complex assembly" evidence=IDA] InterPro:IPR009071 MGI:MGI:98360
Pfam:PF00505 GO:GO:0005634 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 EMBL:AL928568 KO:K09268 InterPro:IPR017386
PIRSF:PIRSF038098 HOGENOM:HOG000231874 GeneTree:ENSGT00690000101789
CTD:6666 eggNOG:NOG290369 HOVERGEN:HBG094895 OMA:VQQRGAR
OrthoDB:EOG41VK47 EMBL:BC067019 EMBL:Z18961 EMBL:U70442
IPI:IPI00111161 PIR:S30240 RefSeq:NP_035568.1 UniGene:Mm.28424
ProteinModelPortal:Q04890 SMR:Q04890 STRING:Q04890
PhosphoSite:Q04890 PRIDE:Q04890 Ensembl:ENSMUST00000063332
GeneID:20667 KEGG:mmu:20667 UCSC:uc008nfi.1 InParanoid:A2AS82
ChiTaRS:SOX12 NextBio:299133 Bgee:Q04890 CleanEx:MM_SOX12
Genevestigator:Q04890 GermOnline:ENSMUSG00000051817 Uniprot:Q04890
Length = 314
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ P MHN+EISKRLG W+LL + K PF+ EA+RLR
Sbjct: 40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLK 99
Query: 143 HMKEH 147
HM ++
Sbjct: 100 HMADY 104
>RGD|1586313 [details] [associations]
symbol:Sox12 "SRY (sex determining region Y)-box 12"
species:10116 "Rattus norvegicus" [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=ISO;ISS]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO;ISS]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO;ISS] [GO:0021510 "spinal cord development"
evidence=ISO;ISS] [GO:0032993 "protein-DNA complex"
evidence=IEA;ISO] [GO:0045165 "cell fate commitment"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0065004
"protein-DNA complex assembly" evidence=IEA;ISO] InterPro:IPR009071
Pfam:PF00505 RGD:1586313 GO:GO:0001077 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0021510
GO:GO:0000976 GO:GO:0001105 GO:GO:0045165 GO:GO:0032993
GO:GO:0065004 KO:K09268 InterPro:IPR017386 PIRSF:PIRSF038098
GeneTree:ENSGT00690000101789 CTD:6666 OrthoDB:EOG41VK47
IPI:IPI00368815 RefSeq:NP_001162121.1 UniGene:Rn.224641
PRIDE:D3ZZ13 Ensembl:ENSRNOT00000009852 GeneID:689988
KEGG:rno:689988 UCSC:RGD:1586313 NextBio:739931 Uniprot:D3ZZ13
Length = 314
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 38/65 (58%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ P MHN+EISKRLG W+LL + K PF+ EA+RLR
Sbjct: 40 IKRPMNAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLK 99
Query: 143 HMKEH 147
HM ++
Sbjct: 100 HMADY 104
>ZFIN|ZDB-GENE-080725-1 [details] [associations]
symbol:sox18 "SRY-box containing gene 18"
species:7955 "Danio rerio" [GO:0001570 "vasculogenesis"
evidence=IGI] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-080725-1 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0001570 InterPro:IPR021934
Pfam:PF12067 PROSITE:PS51516 GeneTree:ENSGT00670000097649 KO:K09270
CTD:54345 EMBL:CR457456 IPI:IPI00632675 RefSeq:XP_001337702.1
UniGene:Dr.88332 Ensembl:ENSDART00000132992 GeneID:797246
KEGG:dre:797246 NextBio:20932931 Bgee:E7F9I2 Uniprot:E7F9I2
Length = 431
Score = 210 (79.0 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 34/66 (51%), Positives = 52/66 (78%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A NP +HN+ +SK LG WK L+ KRPF++EA+RLR
Sbjct: 93 RIRRPMNAFMVWAKDERKRLAIQNPDLHNAVLSKMLGQSWKALSTLDKRPFVEEAERLRL 152
Query: 142 VHMKEH 147
H+++H
Sbjct: 153 QHLQDH 158
>UNIPROTKB|P40671 [details] [associations]
symbol:P40671 "SRY-related protein CH32" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86324 IPI:IPI00597041
PIR:I50193 ProteinModelPortal:P40671 SMR:P40671 Uniprot:P40671
Length = 54
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MA +NPKMHNSEIS+RLGAEWKLL+E KRP+IDEAKRLRA HMKE+
Sbjct: 1 MALENPKMHNSEISQRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEY 47
>UNIPROTKB|P40665 [details] [associations]
symbol:P40665 "SRY-related protein CH1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86320 IPI:IPI00574315
PIR:I50190 ProteinModelPortal:P40665 SMR:P40665 STRING:P40665
eggNOG:NOG321816 InParanoid:P40665 OrthoDB:EOG4MPHQV Uniprot:P40665
Length = 54
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MA +NPKMHNSEISKRLGAEWK L+E KRPFIDEAKR RA+HMKE+
Sbjct: 1 MALENPKMHNSEISKRLGAEWKQLSEAEKRPFIDEAKRHRAMHMKEY 47
>UNIPROTKB|P40669 [details] [associations]
symbol:P40669 "SRY-related protein CH7" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:M86327 IPI:IPI00588027
PIR:I50197 ProteinModelPortal:P40669 SMR:P40669 STRING:P40669
InParanoid:P40669 Uniprot:P40669
Length = 54
Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 38/47 (80%), Positives = 42/47 (89%)
Query: 101 MAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKEH 147
MA +NPKMHNSE SKRLGAEWKLL+E KRPFIDEAKRLRA+ MKE+
Sbjct: 1 MALENPKMHNSESSKRLGAEWKLLSEAEKRPFIDEAKRLRAMRMKEY 47
>FB|FBgn0005612 [details] [associations]
symbol:Sox14 "Sox box protein 14" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;IMP;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0016322 "neuron remodeling" evidence=IGI]
[GO:0048813 "dendrite morphogenesis" evidence=IGI] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0007552 "metamorphosis" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599 GO:GO:0005634
GO:GO:0043565 GO:GO:0016322 GO:GO:0006357 GO:GO:0006351
GO:GO:0008301 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048813 GO:GO:0007552 eggNOG:NOG130659
GeneTree:ENSGT00690000101789 CTD:8403 EMBL:AJ252125 EMBL:X65667
PIR:S22935 RefSeq:NP_476894.1 RefSeq:NP_599117.1 UniGene:Dm.760
ProteinModelPortal:P40656 SMR:P40656 IntAct:P40656 MINT:MINT-791196
STRING:P40656 EnsemblMetazoa:FBtr0072157 EnsemblMetazoa:FBtr0072158
GeneID:37822 KEGG:dme:Dmel_CG3090 FlyBase:FBgn0005612
InParanoid:P40656 OMA:NDANLHS OrthoDB:EOG4ZGMVV PhylomeDB:P40656
GenomeRNAi:37822 NextBio:805561 Bgee:P40656 GermOnline:CG3090
Uniprot:P40656
Length = 669
Score = 206 (77.6 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 36/65 (55%), Positives = 52/65 (80%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ + P +HN+EISK LG W+LL++ K+P+I EA++LR +
Sbjct: 187 IKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDDKQPYIIEAEKLRKL 246
Query: 143 HMKEH 147
HM E+
Sbjct: 247 HMIEY 251
>UNIPROTKB|F1S992 [details] [associations]
symbol:SOX-6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 PANTHER:PTHR10270:SF89 EMBL:CU462935
EMBL:CU576535 Ensembl:ENSSSCT00000014619 ArrayExpress:F1S992
Uniprot:F1S992
Length = 247
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 40 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 99
Query: 143 HMKEH 147
H++++
Sbjct: 100 HLEKY 104
>UNIPROTKB|Q8AXQ4 [details] [associations]
symbol:sox12 "Transcription factor Sox-12" species:8355
"Xenopus laevis" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0005634 "nucleus"
evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
HSSP:P48431 KO:K09268 CTD:6666 EMBL:AB086020 EMBL:BC169671
EMBL:BC169697 RefSeq:NP_001079045.1 UniGene:Xl.21610
ProteinModelPortal:Q8AXQ4 GeneID:373574 KEGG:xla:373574
Xenbase:XB-GENE-864958 Uniprot:Q8AXQ4
Length = 244
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVWS+ +RRK+ P MHN++IS+ LG WKLL + K P++ EA+RLR
Sbjct: 31 IKRPMNAFMVWSQIERRKLMSLCPNMHNADISRSLGQRWKLLQDTDKIPYVREAERLRLK 90
Query: 143 HMKEH 147
HM ++
Sbjct: 91 HMADY 95
>UNIPROTKB|Q86G49 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform b" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 HSSP:P35710 UCSC:T22B7.1c.2 HOGENOM:HOG000020384
NextBio:911168 ProteinModelPortal:Q86G49 SMR:Q86G49 STRING:Q86G49
EnsemblMetazoa:T22B7.1b.1 EnsemblMetazoa:T22B7.1b.2
WormBase:T22B7.1b ArrayExpress:Q86G49 Uniprot:Q86G49
Length = 316
Score = 198 (74.8 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW+R +RRK+ + P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 173 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLS 232
Query: 141 AVHMKEH 147
+HM++H
Sbjct: 233 KLHMEQH 239
>UNIPROTKB|H2L0M3 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform d" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 ProteinModelPortal:H2L0M3 SMR:H2L0M3
EnsemblMetazoa:T22B7.1d WormBase:T22B7.1d Uniprot:H2L0M3
Length = 319
Score = 198 (74.8 bits), Expect = 3.5e-15, P = 3.5e-15
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW+R +RRK+ + P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 176 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLS 235
Query: 141 AVHMKEH 147
+HM++H
Sbjct: 236 KLHMEQH 242
>UNIPROTKB|F1NSW6 [details] [associations]
symbol:SOX11 "Transcription factor SOX-11" species:9031
"Gallus gallus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0000979 "RNA
polymerase II core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001841 "neural tube formation" evidence=IEA]
[GO:0002089 "lens morphogenesis in camera-type eye" evidence=IEA]
[GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003211
"cardiac ventricle formation" evidence=IEA] [GO:0003357
"noradrenergic neuron differentiation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=IEA] [GO:0014009 "glial cell proliferation" evidence=IEA]
[GO:0014032 "neural crest cell development" evidence=IEA]
[GO:0017015 "regulation of transforming growth factor beta receptor
signaling pathway" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0021782 "glial cell development"
evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
pathway" evidence=IEA] [GO:0035332 "positive regulation of hippo
signaling cascade" evidence=IEA] [GO:0045666 "positive regulation
of neuron differentiation" evidence=IEA] [GO:0045669 "positive
regulation of osteoblast differentiation" evidence=IEA] [GO:0045778
"positive regulation of ossification" evidence=IEA] [GO:0046887
"positive regulation of hormone secretion" evidence=IEA]
[GO:0048485 "sympathetic nervous system development" evidence=IEA]
[GO:0048557 "embryonic digestive tract morphogenesis" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0050672 "negative regulation of lymphocyte proliferation"
evidence=IEA] [GO:0050769 "positive regulation of neurogenesis"
evidence=IEA] [GO:0060022 "hard palate development" evidence=IEA]
[GO:0060023 "soft palate development" evidence=IEA] [GO:0060174
"limb bud formation" evidence=IEA] [GO:0060253 "negative regulation
of glial cell proliferation" evidence=IEA] [GO:0060412 "ventricular
septum morphogenesis" evidence=IEA] [GO:0060425 "lung
morphogenesis" evidence=IEA] [GO:0060548 "negative regulation of
cell death" evidence=IEA] [GO:0060563 "neuroepithelial cell
differentiation" evidence=IEA] [GO:0061029 "eyelid development in
camera-type eye" evidence=IEA] [GO:0061053 "somite development"
evidence=IEA] [GO:0061303 "cornea development in camera-type eye"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IEA]
[GO:2000648 "positive regulation of stem cell proliferation"
evidence=IEA] [GO:2001111 "positive regulation of lens epithelial
cell proliferation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0005737 GO:GO:0008135 GO:GO:0001077
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0030513 GO:GO:0045669 GO:GO:0060548
GO:GO:0001105 GO:GO:0000979 GO:GO:0001158 GO:GO:0060563
GO:GO:0045778 GO:GO:0017015 GO:GO:0046887 GO:GO:2000648
GO:GO:0050672 IPI:IPI00602181 InterPro:IPR017386 PIRSF:PIRSF038098
OMA:TEEGEFM GO:GO:0035332 GO:GO:2001111 GO:GO:0072404
GeneTree:ENSGT00690000101789 EMBL:AADN02002906
Ensembl:ENSGALT00000026447 ArrayExpress:F1NSW6 Uniprot:F1NSW6
Length = 344
Score = 198 (74.8 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 36/61 (59%), Positives = 47/61 (77%)
Query: 87 MNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHMKE 146
MNAFMVWS+ +RRK+ + +P MHN+EISKRLG WK+L + K PFI EA+RLR HM +
Sbjct: 1 MNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMAD 60
Query: 147 H 147
+
Sbjct: 61 Y 61
>UNIPROTKB|Q4PIT4 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform c" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
EMBL:FO081738 UniGene:Cel.8590 GeneID:180833 KEGG:cel:CELE_T22B7.1
UCSC:T22B7.1c.2 CTD:180833 HOGENOM:HOG000020384 NextBio:911168
RefSeq:NP_001024920.1 ProteinModelPortal:Q4PIT4 SMR:Q4PIT4
STRING:Q4PIT4 EnsemblMetazoa:T22B7.1c.1 EnsemblMetazoa:T22B7.1c.2
WormBase:T22B7.1c ArrayExpress:Q4PIT4 Uniprot:Q4PIT4
Length = 422
Score = 198 (74.8 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW+R +RRK+ + P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 279 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLS 338
Query: 141 AVHMKEH 147
+HM++H
Sbjct: 339 KLHMEQH 345
>WB|WBGene00001182 [details] [associations]
symbol:egl-13 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0009653 "anatomical
structure morphogenesis" evidence=IMP] [GO:0040025 "vulval
development" evidence=IMP] [GO:0045026 "plasma membrane fusion"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0001708
GO:GO:0018991 GO:GO:0040011 GO:GO:0003700 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0040035
GO:GO:0030163 GO:GO:0009653 GO:GO:0040025 GO:GO:0045026
GeneTree:ENSGT00690000101789 eggNOG:NOG253815 EMBL:FO081738
EMBL:AF097319 PIR:T25909 PIR:T43675 RefSeq:NP_001024918.1
UniGene:Cel.8590 HSSP:P35710 ProteinModelPortal:Q23045 SMR:Q23045
IntAct:Q23045 STRING:Q23045 PRIDE:Q23045 EnsemblMetazoa:T22B7.1a
GeneID:180833 KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833
WormBase:T22B7.1a HOGENOM:HOG000020384 InParanoid:Q23045
OMA:STISDHT NextBio:911168 ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 198 (74.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW+R +RRK+ + P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 327 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLS 386
Query: 141 AVHMKEH 147
+HM++H
Sbjct: 387 KLHMEQH 393
>UNIPROTKB|Q23045 [details] [associations]
symbol:egl-13 "Protein EGL-13, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0001708 GO:GO:0018991 GO:GO:0040011
GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0040035 GO:GO:0030163 GO:GO:0009653
GO:GO:0040025 GO:GO:0045026 GeneTree:ENSGT00690000101789
eggNOG:NOG253815 EMBL:FO081738 EMBL:AF097319 PIR:T25909 PIR:T43675
RefSeq:NP_001024918.1 UniGene:Cel.8590 HSSP:P35710
ProteinModelPortal:Q23045 SMR:Q23045 IntAct:Q23045 STRING:Q23045
PRIDE:Q23045 EnsemblMetazoa:T22B7.1a GeneID:180833
KEGG:cel:CELE_T22B7.1 UCSC:T22B7.1c.2 CTD:180833 WormBase:T22B7.1a
HOGENOM:HOG000020384 InParanoid:Q23045 OMA:STISDHT NextBio:911168
ArrayExpress:Q23045 Uniprot:Q23045
Length = 470
Score = 198 (74.8 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW+R +RRK+ + P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 327 NHIKRPMNAFMVWARDERRKILKAYPDMHNSNISKILGSRWKGMSNSEKQPYYEEQSRLS 386
Query: 141 AVHMKEH 147
+HM++H
Sbjct: 387 KLHMEQH 393
>FB|FBgn0039938 [details] [associations]
symbol:Sox102F "Sox102F" species:7227 "Drosophila
melanogaster" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR009071 Pfam:PF00505
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AE014135 GeneTree:ENSGT00690000101789 eggNOG:NOG253815
EMBL:BT133294 RefSeq:NP_001014695.1 UniGene:Dm.18582 SMR:Q59DN5
EnsemblMetazoa:FBtr0100600 GeneID:43844 KEGG:dme:Dmel_CG11153
UCSC:CG11153-RB CTD:43844 FlyBase:FBgn0039938 OMA:LMRNRRA
OrthoDB:EOG42BVQS GenomeRNAi:43844 NextBio:836205 Uniprot:Q59DN5
Length = 618
Score = 197 (74.4 bits), Expect = 4.1e-14, P = 4.1e-14
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ + P MHNS ISK LGA WK ++ K+P+ +E RL +
Sbjct: 423 IKRPMNAFMVWAKDERRKILKACPDMHNSNISKILGARWKAMSNADKQPYYEEQSRLSKL 482
Query: 143 HMKEH 147
HM++H
Sbjct: 483 HMEQH 487
>RGD|1586382 [details] [associations]
symbol:Sox30 "SRY (sex determining region Y)-box 30"
species:10116 "Rattus norvegicus" [GO:0000981 "sequence-specific
DNA binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0031960 "response to corticosteroid
stimulus" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1586382
GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
GeneTree:ENSGT00670000098123 IPI:IPI00930917
Ensembl:ENSRNOT00000007978 Uniprot:F1M453
Length = 627
Score = 184 (69.8 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E+ K+P+ DEA++++
Sbjct: 211 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 270
Query: 143 HMKE 146
H +E
Sbjct: 271 HREE 274
Score = 52 (23.4 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 213 MPN--GYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSY--MNGSSY 262
MP GY D YQ+H A + ++ YP D H S S M+G Y
Sbjct: 519 MPECLGYYED--RYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESMDGPPY 570
>UNIPROTKB|F1NAU5 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0048821 "erythrocyte development" evidence=IEA] [GO:0051216
"cartilage development" evidence=IEA] [GO:0061036 "positive
regulation of cartilage development" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=IEA] InterPro:IPR009071
InterPro:IPR027153 Pfam:PF00505 GO:GO:0005634 GO:GO:0071560
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0000122
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0032332 GO:GO:0045165 GO:GO:0016458
GO:GO:0061036 GeneTree:ENSGT00690000101789 GO:GO:2000741
OMA:FENLGPQ PANTHER:PTHR10270:SF89 EMBL:AADN02030483
EMBL:AADN02030484 EMBL:AADN02030485 EMBL:AADN02030486
EMBL:AADN02030487 EMBL:AADN02030488 EMBL:AADN02030489
EMBL:AADN02030490 EMBL:AADN02030491 EMBL:AADN02030492
EMBL:AADN02030493 EMBL:AADN02030494 EMBL:AADN02030495
EMBL:AADN02030496 EMBL:AADN02030497 EMBL:AADN02030498
EMBL:AADN02030499 EMBL:AADN02030500 EMBL:AADN02030501
EMBL:AADN02030502 EMBL:AADN02030503 EMBL:AADN02030504
EMBL:AADN02030505 IPI:IPI00597024 Ensembl:ENSGALT00000009804
Uniprot:F1NAU5
Length = 783
Score = 195 (73.7 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 576 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 635
Query: 143 HMKEH 147
H++++
Sbjct: 636 HLEKY 640
>RGD|1309000 [details] [associations]
symbol:Sox6 "SRY (sex determining region Y)-box 6" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000902 "cell morphogenesis" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0009791 "post-embryonic
development" evidence=ISO] [GO:0010468 "regulation of gene
expression" evidence=ISO] [GO:0016458 "gene silencing"
evidence=ISO] [GO:0021778 "oligodendrocyte cell fate specification"
evidence=ISO] [GO:0030097 "hemopoiesis" evidence=ISO] [GO:0030218
"erythrocyte differentiation" evidence=ISO] [GO:0032332 "positive
regulation of chondrocyte differentiation" evidence=ISO]
[GO:0035051 "cardiocyte differentiation" evidence=ISO] [GO:0042692
"muscle cell differentiation" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045165 "cell fate commitment" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048708 "astrocyte
differentiation" evidence=IMP] [GO:0048709 "oligodendrocyte
differentiation" evidence=ISO] [GO:0048821 "erythrocyte
development" evidence=ISO] [GO:0051216 "cartilage development"
evidence=ISO] [GO:0061036 "positive regulation of cartilage
development" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=ISO] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
RGD:1309000 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0048708 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 CTD:55553
PANTHER:PTHR10270:SF89 IPI:IPI00371181 EMBL:BC097403
RefSeq:NP_001019922.1 UniGene:Rn.76073 ProteinModelPortal:Q4V8G3
SMR:Q4V8G3 STRING:Q4V8G3 GeneID:293165 KEGG:rno:293165
UCSC:RGD:1309000 NextBio:635493 Genevestigator:Q4V8G3
Uniprot:Q4V8G3
Length = 787
Score = 195 (73.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 580 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 639
Query: 143 HMKEH 147
H++++
Sbjct: 640 HLEKY 644
>UNIPROTKB|F6UQM4 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR027153
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101789 OMA:FENLGPQ
PANTHER:PTHR10270:SF89 Ensembl:ENSCAFT00000013736 EMBL:AAEX03012946
EMBL:AAEX03012947 EMBL:AAEX03012948 Uniprot:F6UQM4
Length = 793
Score = 195 (73.7 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 586 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 645
Query: 143 HMKEH 147
H++++
Sbjct: 646 HLEKY 650
>MGI|MGI:98368 [details] [associations]
symbol:Sox6 "SRY-box containing gene 6" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP;IDA] [GO:0000902 "cell
morphogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IGI;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0005667
"transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0016458 "gene
silencing" evidence=IMP] [GO:0021778 "oligodendrocyte cell fate
specification" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0030218 "erythrocyte differentiation"
evidence=IMP] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=ISO;IDA] [GO:0035051 "cardiocyte
differentiation" evidence=IDA] [GO:0042692 "muscle cell
differentiation" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0048708 "astrocyte differentiation" evidence=ISO]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0048821 "erythrocyte development" evidence=IMP] [GO:0051216
"cartilage development" evidence=IGI] [GO:0061036 "positive
regulation of cartilage development" evidence=ISO] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=ISO] [GO:2000741 "positive regulation of mesenchymal stem
cell differentiation" evidence=ISO] InterPro:IPR009071
InterPro:IPR027153 MGI:MGI:98368 Pfam:PF00505 GO:GO:0071560
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0042692 GO:GO:0009791 GO:GO:0000902 GO:GO:0032332
GO:GO:0051216 GO:GO:0048821 GO:GO:0016458 GO:GO:0035051
GO:GO:0061036 GO:GO:0021778 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 GO:GO:2000741 CTD:55553
OMA:FENLGPQ ChiTaRS:SOX6 PANTHER:PTHR10270:SF89 EMBL:U32614
EMBL:D61689 EMBL:AJ010605 EMBL:X65659 IPI:IPI00620986
IPI:IPI00623688 PIR:S22944 PIR:S59121 RefSeq:NP_035575.1
UniGene:Mm.323365 ProteinModelPortal:P40645 SMR:P40645
IntAct:P40645 STRING:P40645 PhosphoSite:P40645 PRIDE:P40645
Ensembl:ENSMUST00000072804 Ensembl:ENSMUST00000166207 GeneID:20679
KEGG:mmu:20679 UCSC:uc009jin.1 InParanoid:P40645 OrthoDB:EOG4N8R45
NextBio:299177 Bgee:P40645 CleanEx:MM_SOX6 Genevestigator:P40645
GermOnline:ENSMUSG00000051910 Uniprot:P40645
Length = 827
Score = 195 (73.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 620 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 679
Query: 143 HMKEH 147
H++++
Sbjct: 680 HLEKY 684
>UNIPROTKB|P35712 [details] [associations]
symbol:SOX6 "Transcription factor SOX-6" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0016458 "gene silencing" evidence=IEA]
[GO:0021778 "oligodendrocyte cell fate specification" evidence=IEA]
[GO:0035051 "cardiocyte differentiation" evidence=IEA] [GO:0042692
"muscle cell differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048821 "erythrocyte
development" evidence=IEA] [GO:0051216 "cartilage development"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0007517 "muscle
organ development" evidence=NAS] [GO:0003677 "DNA binding"
evidence=NAS] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IDA] [GO:0061036 "positive regulation of
cartilage development" evidence=IDA] [GO:0071560 "cellular response
to transforming growth factor beta stimulus" evidence=IDA]
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
GO:GO:0005634 EMBL:CH471064 GO:GO:0071560 GO:GO:0003677
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0042692
GO:GO:0009791 GO:GO:0007517 GO:GO:0000902 GO:GO:0032332
GO:GO:0051216 GO:GO:0048821 GO:GO:0016458 GO:GO:0035051
GO:GO:0061036 GO:GO:0021778 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 eggNOG:NOG253815 GO:GO:2000741 EMBL:AF309034
EMBL:AF309476 EMBL:AF309471 EMBL:AF309472 EMBL:AF309473
EMBL:AF309474 EMBL:AF309475 EMBL:AL136780 EMBL:AC009869
EMBL:AC013595 EMBL:AC027016 EMBL:AC068405 EMBL:AC103794
EMBL:BC037866 EMBL:BC047064 EMBL:X65663 IPI:IPI00218631
IPI:IPI00641980 IPI:IPI00872738 IPI:IPI00926649
RefSeq:NP_001139283.1 RefSeq:NP_001139291.1 RefSeq:NP_059978.1
RefSeq:NP_201583.2 UniGene:Hs.368226 ProteinModelPortal:P35712
SMR:P35712 IntAct:P35712 STRING:P35712 PhosphoSite:P35712
DMDM:215274178 PaxDb:P35712 PRIDE:P35712 DNASU:55553
Ensembl:ENST00000316399 Ensembl:ENST00000352083
Ensembl:ENST00000396356 Ensembl:ENST00000527619
Ensembl:ENST00000528252 Ensembl:ENST00000528429 GeneID:55553
KEGG:hsa:55553 UCSC:uc001mmd.3 UCSC:uc001mme.3 UCSC:uc001mmf.3
UCSC:uc001mmg.3 CTD:55553 GeneCards:GC11M015949 HGNC:HGNC:16421
HPA:HPA001923 HPA:HPA003908 MIM:607257 neXtProt:NX_P35712
PharmGKB:PA38137 InParanoid:P35712 OMA:FENLGPQ ChiTaRS:SOX6
GenomeRNAi:55553 NextBio:60012 ArrayExpress:P35712 Bgee:P35712
CleanEx:HS_SOX6 Genevestigator:P35712 GermOnline:ENSG00000110693
PANTHER:PTHR10270:SF89 Uniprot:P35712
Length = 828
Score = 195 (73.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 621 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 680
Query: 143 HMKEH 147
H++++
Sbjct: 681 HLEKY 685
>UNIPROTKB|E2QTS7 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR027153
Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 PANTHER:PTHR10270:SF89 Ensembl:ENSCAFT00000013736
Uniprot:E2QTS7
Length = 829
Score = 195 (73.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 622 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 681
Query: 143 HMKEH 147
H++++
Sbjct: 682 HLEKY 686
>UNIPROTKB|E1BE01 [details] [associations]
symbol:SOX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IEA] [GO:0048821
"erythrocyte development" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0042692 "muscle cell differentiation"
evidence=IEA] [GO:0035051 "cardiocyte differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0021778 "oligodendrocyte cell
fate specification" evidence=IEA] [GO:0016458 "gene silencing"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR009071
InterPro:IPR027153 Pfam:PF00505 GO:GO:0005634 GO:GO:0071560
GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0044212 GO:GO:0042692 GO:GO:0009791
GO:GO:0000902 GO:GO:0032332 GO:GO:0051216 GO:GO:0048821
GO:GO:0016458 GO:GO:0035051 GO:GO:0061036 GO:GO:0021778
GeneTree:ENSGT00690000101789 KO:K09269 GO:GO:2000741 CTD:55553
OMA:FENLGPQ PANTHER:PTHR10270:SF89 EMBL:DAAA02040602
EMBL:DAAA02040603 EMBL:DAAA02040604 EMBL:DAAA02040605
EMBL:DAAA02040606 EMBL:DAAA02040607 EMBL:DAAA02040608
EMBL:DAAA02040609 EMBL:DAAA02040610 EMBL:DAAA02040611
EMBL:DAAA02040612 IPI:IPI01000762 RefSeq:NP_001178347.1
UniGene:Bt.62052 Ensembl:ENSBTAT00000061473 GeneID:534321
KEGG:bta:534321 NextBio:20876354 Uniprot:E1BE01
Length = 841
Score = 195 (73.7 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL +
Sbjct: 634 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKI 693
Query: 143 HMKEH 147
H++++
Sbjct: 694 HLEKY 698
>MGI|MGI:1341157 [details] [associations]
symbol:Sox30 "SRY-box containing gene 30" species:10090 "Mus
musculus" [GO:0000981 "sequence-specific DNA binding RNA polymerase
II transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] InterPro:IPR009071
MGI:MGI:1341157 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960 KO:K09271 CTD:11063
eggNOG:NOG329829 HOGENOM:HOG000070158 HOVERGEN:HBG057980
OMA:VPQLDIG OrthoDB:EOG4CVG6C EMBL:AY005801 IPI:IPI00229589
RefSeq:NP_775560.1 UniGene:Mm.66708 ProteinModelPortal:Q8CGW4
SMR:Q8CGW4 PhosphoSite:Q8CGW4 PaxDb:Q8CGW4 PRIDE:Q8CGW4
DNASU:214105 Ensembl:ENSMUST00000049038 GeneID:214105
KEGG:mmu:214105 GeneTree:ENSGT00670000098123 InParanoid:Q8CGW4
NextBio:374182 Bgee:Q8CGW4 CleanEx:MM_SOX30 Genevestigator:Q8CGW4
GermOnline:ENSMUSG00000040489 Uniprot:Q8CGW4
Length = 782
Score = 184 (69.8 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E+ K+P+ DEA++++
Sbjct: 366 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 425
Query: 143 HMKE 146
H +E
Sbjct: 426 HREE 429
Score = 52 (23.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 213 MPN--GYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSY--MNGSSY 262
MP GY D YQ+H A + ++ YP D H S S M+G Y
Sbjct: 674 MPECLGYYED--RYQKHEAIFSALNRDYPFRDYPDEHTHSEDSRSCESMDGPPY 725
>UNIPROTKB|F1RQF2 [details] [associations]
symbol:SOX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0031960 "response to corticosteroid stimulus" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
OMA:VPQLDIG GeneTree:ENSGT00670000098123 EMBL:CU570950
Ensembl:ENSSSCT00000018564 Uniprot:F1RQF2
Length = 764
Score = 184 (69.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E+ K+P+ DEA++++
Sbjct: 348 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 407
Query: 143 HMKE 146
H +E
Sbjct: 408 HREE 411
Score = 51 (23.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 18/54 (33%), Positives = 24/54 (44%)
Query: 213 MPN--GYMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSY--MNGSSY 262
MP GY D YQ+H A + ++ YP D S S M+G+SY
Sbjct: 656 MPECLGYYED--RYQKHEAMFSALNRDYPFRDYPDERAHSEDSRSCESMDGTSY 707
>ZFIN|ZDB-GENE-081120-6 [details] [associations]
symbol:sox6 "SRY-box containing gene 6" species:7955
"Danio rerio" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505
ZFIN:ZDB-GENE-081120-6 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
PANTHER:PTHR10270:SF89 EMBL:BX537340 EMBL:BX936464 EMBL:BX936427
IPI:IPI01024072 Ensembl:ENSDART00000150068 ArrayExpress:F8W2H3
Bgee:F8W2H3 Uniprot:F8W2H3
Length = 785
Score = 194 (73.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + Q K+P+ +E RL +
Sbjct: 576 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPYYEEQARLSKI 635
Query: 143 HMKEH 147
H++++
Sbjct: 636 HLEKY 640
>UNIPROTKB|Q29RR8 [details] [associations]
symbol:SOX30 "SRY (Sex determining region Y)-box 30"
species:9913 "Bos taurus" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0031960 "response to corticosteroid
stimulus" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0000981 "sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043565 GO:GO:0007283 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981
GO:GO:0031960 KO:K09271 CTD:11063 eggNOG:NOG329829
HOGENOM:HOG000070158 HOVERGEN:HBG057980 OMA:VPQLDIG
OrthoDB:EOG4CVG6C GeneTree:ENSGT00670000098123 EMBL:DAAA02020795
EMBL:DAAA02020796 EMBL:BC114054 IPI:IPI00687049
RefSeq:NP_001039894.1 UniGene:Bt.50786 Ensembl:ENSBTAT00000027304
GeneID:538232 KEGG:bta:538232 InParanoid:Q29RR8 NextBio:20877312
Uniprot:Q29RR8
Length = 766
Score = 184 (69.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E+ K+P+ DEA++++
Sbjct: 351 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 410
Query: 143 HMKE 146
H +E
Sbjct: 411 HREE 414
Score = 50 (22.7 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 213 MPN--GYMMDPATYQQHSAYTTHMSSGYPRYDMTG--MHPSSTSLNSYMNGSSY 262
MP GY D YQ+H A + ++ YP D H + M+G+SY
Sbjct: 658 MPECLGYYED--RYQKHEAMFSALNRDYPFRDYPDERAHNEDSRSCENMDGTSY 709
>UNIPROTKB|G3N2M6 [details] [associations]
symbol:SOX7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060828 "regulation of canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0043565 GO:GO:0003705 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0043280
GO:GO:0060828 GO:GO:0001706 InterPro:IPR021934 Pfam:PF12067
PROSITE:PS51516 GeneTree:ENSGT00670000097649 OMA:ECPALEA
EMBL:DAAA02021933 Ensembl:ENSBTAT00000065564 Uniprot:G3N2M6
Length = 406
Score = 190 (71.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 32/66 (48%), Positives = 50/66 (75%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
R++RPMNAFMVW++ +R+++A P +HN+E+S+ G WK L KRP++DEA+RLR
Sbjct: 64 RIRRPMNAFMVWAKDERKRLAVQ-PDLHNAELSRCWGKSWKALTLSQKRPYVDEAERLRL 122
Query: 142 VHMKEH 147
HM+++
Sbjct: 123 QHMQDY 128
>UNIPROTKB|E1BL97 [details] [associations]
symbol:SOX13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OMA:TMVNCTV EMBL:DAAA02041911 IPI:IPI00825051
Ensembl:ENSBTAT00000010692 Uniprot:E1BL97
Length = 622
Score = 190 (71.9 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ Q K+P+ +E RL
Sbjct: 424 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQ 483
Query: 143 HMKEH 147
H++++
Sbjct: 484 HLEKY 488
>FB|FBgn0024288 [details] [associations]
symbol:Sox100B "Sox100B" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008301 "DNA binding, bending"
evidence=ISS] [GO:0008584 "male gonad development"
evidence=IMP;IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0008584
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
InterPro:IPR022151 Pfam:PF12444 HSSP:P48432 EMBL:AJ251580
ProteinModelPortal:Q9VA16 SMR:Q9VA16 STRING:Q9VA16
FlyBase:FBgn0024288 InParanoid:Q9VA16 OrthoDB:EOG4Q83CZ Bgee:Q9VA16
Uniprot:Q9VA16
Length = 529
Score = 189 (71.6 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW++ RR M++ P + NSE+SK LG WK L + K+PF++ A++LR
Sbjct: 75 EHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLR 134
Query: 141 AVHMKEH 147
H +EH
Sbjct: 135 MTHKQEH 141
>UNIPROTKB|F1S3U8 [details] [associations]
symbol:SOX13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OMA:TMVNCTV EMBL:CU972366 Ensembl:ENSSSCT00000016646 Uniprot:F1S3U8
Length = 545
Score = 189 (71.6 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + Q K+P+ +E RL
Sbjct: 441 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 500
Query: 143 HMKEH 147
H++++
Sbjct: 501 HLEKY 505
>MGI|MGI:98361 [details] [associations]
symbol:Sox13 "SRY-box containing gene 13" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] InterPro:IPR009071 MGI:MGI:98361
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GeneTree:ENSGT00690000101789 CTD:9580
eggNOG:NOG275089 HOVERGEN:HBG003915 KO:K09269 OMA:TMVNCTV
EMBL:BC007130 EMBL:AB006329 EMBL:AJ000740 EMBL:Z18962
IPI:IPI00228353 PIR:JC6550 PIR:S30241 RefSeq:NP_035569.2
UniGene:Mm.8575 ProteinModelPortal:Q04891 SMR:Q04891 STRING:Q04891
PhosphoSite:Q04891 PRIDE:Q04891 Ensembl:ENSMUST00000094551
Ensembl:ENSMUST00000153799 GeneID:20668 KEGG:mmu:20668
UCSC:uc007cqk.1 HOGENOM:HOG000056455 InParanoid:Q04891
NextBio:299137 Bgee:Q04891 CleanEx:MM_SOX13 Genevestigator:Q04891
GermOnline:ENSMUSG00000070643 Uniprot:Q04891
Length = 613
Score = 189 (71.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + Q K+P+ +E RL
Sbjct: 416 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 475
Query: 143 HMKEH 147
H++++
Sbjct: 476 HLEKY 480
>RGD|1309674 [details] [associations]
symbol:Sox13 "SRY (sex determining region Y)-box 13"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] InterPro:IPR009071 Pfam:PF00505 RGD:1309674
GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
OrthoDB:EOG40S0F9 IPI:IPI00869801 Ensembl:ENSRNOT00000032244
UCSC:RGD:1309674 Uniprot:D4A8S0
Length = 613
Score = 189 (71.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + Q K+P+ +E RL
Sbjct: 416 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 475
Query: 143 HMKEH 147
H++++
Sbjct: 476 HLEKY 480
>UNIPROTKB|Q9UN79 [details] [associations]
symbol:SOX13 "Transcription factor SOX-13" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0043565
EMBL:CH471067 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0009653
EMBL:AL592146 EMBL:AF083105 EMBL:AF098915 EMBL:AF116571
EMBL:AK304192 EMBL:AF149301 EMBL:BC106038 IPI:IPI00219551
RefSeq:NP_005677.2 UniGene:Hs.201671 ProteinModelPortal:Q9UN79
SMR:Q9UN79 IntAct:Q9UN79 MINT:MINT-1179847 STRING:Q9UN79
PhosphoSite:Q9UN79 DMDM:288558840 PRIDE:Q9UN79 DNASU:9580
Ensembl:ENST00000367204 GeneID:9580 KEGG:hsa:9580 UCSC:uc001ham.3
CTD:9580 GeneCards:GC01P204043 HGNC:HGNC:11192 MIM:604748
neXtProt:NX_Q9UN79 PharmGKB:PA36029 eggNOG:NOG275089
HOVERGEN:HBG003915 InParanoid:Q9UN79 KO:K09269 OMA:TMVNCTV
OrthoDB:EOG40S0F9 GenomeRNAi:9580 NextBio:35933 ArrayExpress:Q9UN79
Bgee:Q9UN79 CleanEx:HS_SOX13 Genevestigator:Q9UN79
GermOnline:ENSG00000143842 Uniprot:Q9UN79
Length = 622
Score = 189 (71.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + Q K+P+ +E RL
Sbjct: 424 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQ 483
Query: 143 HMKEH 147
H++++
Sbjct: 484 HLEKY 488
>UNIPROTKB|F1SFJ1 [details] [associations]
symbol:SOX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
GO:GO:2000741 EMBL:CU695217 Ensembl:ENSSSCT00000000610 OMA:GEEPHII
Uniprot:F1SFJ1
Length = 316
Score = 183 (69.5 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + K+P+ +E RL
Sbjct: 113 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 172
Query: 143 HMKEH 147
H++++
Sbjct: 173 HLEKY 177
>UNIPROTKB|G3N274 [details] [associations]
symbol:Bt.30086 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:2000138 "positive regulation of
cell proliferation involved in heart morphogenesis" evidence=IEA]
[GO:2000020 "positive regulation of male gonad development"
evidence=IEA] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=IEA] [GO:0090103
"cochlea morphogenesis" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072289 "metanephric nephron tubule formation"
evidence=IEA] [GO:0072197 "ureter morphogenesis" evidence=IEA]
[GO:0072190 "ureter urothelium development" evidence=IEA]
[GO:0072034 "renal vesicle induction" evidence=IEA] [GO:0071560
"cellular response to transforming growth factor beta stimulus"
evidence=IEA] [GO:0071504 "cellular response to heparin"
evidence=IEA] [GO:0071364 "cellular response to epidermal growth
factor stimulus" evidence=IEA] [GO:0071347 "cellular response to
interleukin-1" evidence=IEA] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA] [GO:0071260 "cellular response to
mechanical stimulus" evidence=IEA] [GO:0070371 "ERK1 and ERK2
cascade" evidence=IEA] [GO:0061036 "positive regulation of
cartilage development" evidence=IEA] [GO:0060784 "regulation of
cell proliferation involved in tissue homeostasis" evidence=IEA]
[GO:0060729 "intestinal epithelial structure maintenance"
evidence=IEA] [GO:0060517 "epithelial cell proliferation involved
in prostatic bud elongation" evidence=IEA] [GO:0060221 "retinal rod
cell differentiation" evidence=IEA] [GO:0060174 "limb bud
formation" evidence=IEA] [GO:0060018 "astrocyte fate commitment"
evidence=IEA] [GO:0060009 "Sertoli cell development" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
proliferation" evidence=IEA] [GO:0048709 "oligodendrocyte
differentiation" evidence=IEA] [GO:0046533 "negative regulation of
photoreceptor cell differentiation" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0045662 "negative regulation of myoblast
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0043066 "negative regulation
of apoptotic process" evidence=IEA] [GO:0035622 "intrahepatic bile
duct development" evidence=IEA] [GO:0035019 "somatic stem cell
maintenance" evidence=IEA] [GO:0034236 "protein kinase A catalytic
subunit binding" evidence=IEA] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IEA]
[GO:0030916 "otic vesicle formation" evidence=IEA] [GO:0030903
"notochord development" evidence=IEA] [GO:0030879 "mammary gland
development" evidence=IEA] [GO:0030858 "positive regulation of
epithelial cell differentiation" evidence=IEA] [GO:0030502
"negative regulation of bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030155 "regulation of cell adhesion" evidence=IEA] [GO:0019933
"cAMP-mediated signaling" evidence=IEA] [GO:0019100 "male germ-line
sex determination" evidence=IEA] [GO:0014068 "positive regulation
of phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0014032
"neural crest cell development" evidence=IEA] [GO:0010634 "positive
regulation of epithelial cell migration" evidence=IEA] [GO:0010564
"regulation of cell cycle process" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=IEA] [GO:0006461 "protein complex
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0003705
"RNA polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003415 "chondrocyte hypertrophy"
evidence=IEA] [GO:0003413 "chondrocyte differentiation involved in
endochondral bone morphogenesis" evidence=IEA] [GO:0003203
"endocardial cushion morphogenesis" evidence=IEA] [GO:0003188
"heart valve formation" evidence=IEA] [GO:0002683 "negative
regulation of immune system process" evidence=IEA] [GO:0002053
"positive regulation of mesenchymal cell proliferation"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001837 "epithelial to mesenchymal transition"
evidence=IEA] [GO:0001708 "cell fate specification" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001503 "ossification" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0001708 GO:GO:0007173
GO:GO:0045892 GO:GO:0043066 GO:GO:0006461 GO:GO:0030155
GO:GO:0071560 GO:GO:0019933 GO:GO:0070371 GO:GO:0071300
GO:GO:0030198 GO:GO:0014068 GO:GO:0007283 GO:GO:0003682
GO:GO:0003705 GO:GO:0001077 GO:GO:0006338 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0004672
GO:GO:0071504 GO:GO:0001942 GO:GO:0032332 GO:GO:0060009
GO:GO:0090090 GO:GO:0071260 GO:GO:0035019 GO:GO:0001934
GO:GO:0090190 GO:GO:0071364 GO:GO:0031018 GO:GO:0043491
GO:GO:0014032 GO:GO:0001502 GO:GO:0045732 GO:GO:0001837
GO:GO:0050680 GO:GO:0001503 GO:GO:0001658 GO:GO:0071347
GO:GO:0001158 GO:GO:0030858 GO:GO:0048709 GO:GO:0010634
GO:GO:0016585 GO:GO:0006334 GO:GO:0003413 GO:GO:0030879
GO:GO:0050679 GO:GO:0002053 GO:GO:0001046 GO:GO:0030502
GO:GO:2000138 GO:GO:0061036 GO:GO:0003203 GO:GO:0032331
GO:GO:0045662 GO:GO:0030916 GO:GO:2000020 GO:GO:0046533
GO:GO:0060174 GO:GO:0030903 GO:GO:0090103 GO:GO:0010564
GO:GO:0019100 GO:GO:0060018 GO:GO:0035622 GO:GO:0072190
GO:GO:0072289 GO:GO:0072197 GO:GO:0003188
GeneTree:ENSGT00670000097649 InterPro:IPR022151 Pfam:PF12444
GO:GO:2000741 GO:GO:0072034 GO:GO:0060221 GO:GO:0003415
GO:GO:0060517 GO:GO:0060729 GO:GO:0002683 GO:GO:0060784
EMBL:DAAA02049654 EMBL:DAAA02049655 Ensembl:ENSBTAT00000063815
OMA:PEQTHIS Uniprot:G3N274
Length = 226
Score = 168 (64.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNA MVW+ RRK+A P +H +S R A +LLNE KRPF++EA+RLR
Sbjct: 105 VKRPMNA-MVWAHAARRKLADQYPHLHPLSLSPR--AAPRLLNESEKRPFVEEAERLRVQ 161
Query: 143 HMKEH 147
H K+H
Sbjct: 162 HKKDH 166
>MGI|MGI:1097162 [details] [associations]
symbol:Sox19 "SRY-box containing gene 19" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR009071
MGI:MGI:1097162 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
eggNOG:NOG130659 OrthoDB:EOG41VK47 EMBL:X98368 IPI:IPI00123385
ProteinModelPortal:Q62249 SMR:Q62249 STRING:Q62249 PRIDE:Q62249
InParanoid:Q62249 Genevestigator:Q62249 Uniprot:Q62249
Length = 55
Score = 168 (64.2 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 91 MVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVHM 144
MVWS+ +RRK+ + P MHN+EISKRLG WKLL + K PFI EA+RLR HM
Sbjct: 1 MVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKHM 54
>ZFIN|ZDB-GENE-011026-1 [details] [associations]
symbol:sox32 "SRY-box containing gene 32"
species:7955 "Danio rerio" [GO:0001706 "endoderm formation"
evidence=IDA;IMP] [GO:0003007 "heart morphogenesis" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IDA] [GO:0001885
"endothelial cell development" evidence=IMP] [GO:0035050 "embryonic
heart tube development" evidence=IMP] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IGI;IDA] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=IGI;IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0007492
"endoderm development" evidence=IMP] [GO:0007493 "endodermal cell
fate determination" evidence=IMP] [GO:0042074 "cell migration
involved in gastrulation" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IMP] [GO:0061035 "regulation of cartilage
development" evidence=IGI;IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR009071 Pfam:PF00505
ZFIN:ZDB-GENE-011026-1 GO:GO:0005634 GO:GO:0045893 GO:GO:0007498
GO:GO:0003677 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0007368 GO:GO:0042074
GO:GO:0001885 GO:GO:0035050 GO:GO:0007493 GO:GO:0061035 HSSP:P48432
GO:GO:0003262 EMBL:BC097087 EMBL:AF362749 IPI:IPI00494054
RefSeq:NP_571926.1 UniGene:Dr.133216 SMR:Q90Z46 STRING:Q90Z46
GeneID:116990 KEGG:dre:116990 CTD:116990 HOVERGEN:HBG098276
InParanoid:Q90Z46 NextBio:20796959 Uniprot:Q90Z46
Length = 307
Score = 179 (68.1 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 30/62 (48%), Positives = 48/62 (77%)
Query: 82 RVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRA 141
RV+RP+NAF++W++ +RR++AQ NP + N+++SK LG WK ++ KRP++ EA+RLR
Sbjct: 69 RVRRPLNAFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMSLADKRPYMQEAERLRI 128
Query: 142 VH 143
H
Sbjct: 129 QH 130
>UNIPROTKB|E1BQW7 [details] [associations]
symbol:SOX30 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000981 "sequence-specific DNA binding RNA polymerase
II transcription factor activity" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031960 "response to
corticosteroid stimulus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0043565 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0000981 GO:GO:0031960
OMA:VPQLDIG GeneTree:ENSGT00670000098123 EMBL:AADN02028684
IPI:IPI00596095 Ensembl:ENSGALT00000005911 Uniprot:E1BQW7
Length = 548
Score = 183 (69.5 bits), Expect = 6.2e-12, P = 6.2e-12
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L E+ K+P+ DEA++++
Sbjct: 135 VKRPMNAFMVWARIHRPALAKANPNANNAEISVQLGLEWSKLTEEQKQPYYDEARKIKQR 194
Query: 143 HMKE 146
H +E
Sbjct: 195 HREE 198
>UNIPROTKB|Q28EW4 [details] [associations]
symbol:sox13 "Transcription factor Sox-13" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0006355
GO:GO:0043565 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00690000101789
CTD:9580 eggNOG:NOG275089 KO:K09269 HOGENOM:HOG000056455
EMBL:CR762311 RefSeq:NP_001017004.1 UniGene:Str.11026
ProteinModelPortal:Q28EW4 SMR:Q28EW4 Ensembl:ENSXETT00000064129
GeneID:549758 KEGG:xtr:549758 Xenbase:XB-GENE-481889 Bgee:Q28EW4
Uniprot:Q28EW4
Length = 566
Score = 183 (69.5 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 378 IKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNAEKQPYYEEQARLSRQ 437
Query: 143 HMKEH 147
H++ +
Sbjct: 438 HLERY 442
>UNIPROTKB|P40649 [details] [associations]
symbol:sox13 "Transcription factor Sox-13" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0043565
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 CTD:9580 HOVERGEN:HBG003915 KO:K09269 EMBL:D50552
EMBL:BC068647 EMBL:X65655 PIR:S71466 RefSeq:NP_001081238.1
UniGene:Xl.13036 ProteinModelPortal:P40649 SMR:P40649 GeneID:397727
KEGG:xla:397727 Xenbase:XB-GENE-865496 Uniprot:P40649
Length = 567
Score = 183 (69.5 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK ++ K+P+ +E RL
Sbjct: 390 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMSNGEKQPYYEEQARLS 449
Query: 141 AVHMKEH 147
H++ +
Sbjct: 450 RQHLERY 456
>UNIPROTKB|O94993 [details] [associations]
symbol:SOX30 "Transcription factor SOX-30" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0031960 "response to corticosteroid stimulus" evidence=IEP]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0006355 GO:GO:0043565 GO:GO:0007283 GO:GO:0006351
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0000981 GO:GO:0031960 KO:K09271 EMBL:AB022083 EMBL:AB022441
EMBL:BC033492 IPI:IPI00016680 IPI:IPI00220989 RefSeq:NP_008948.1
RefSeq:NP_848511.1 UniGene:Hs.529462 ProteinModelPortal:O94993
SMR:O94993 IntAct:O94993 MINT:MINT-1439929 STRING:O94993
PhosphoSite:O94993 PaxDb:O94993 PRIDE:O94993 DNASU:11063
Ensembl:ENST00000265007 Ensembl:ENST00000311371 GeneID:11063
KEGG:hsa:11063 UCSC:uc003lxb.1 UCSC:uc003lxc.1 CTD:11063
GeneCards:GC05M157053 H-InvDB:HIX0005360 HGNC:HGNC:30635
HPA:CAB009382 HPA:HPA006159 MIM:606698 neXtProt:NX_O94993
PharmGKB:PA134876614 eggNOG:NOG329829 HOGENOM:HOG000070158
HOVERGEN:HBG057980 InParanoid:O94993 OMA:VPQLDIG OrthoDB:EOG4CVG6C
PhylomeDB:O94993 ChiTaRS:SOX30 GenomeRNAi:11063 NextBio:42041
ArrayExpress:O94993 Bgee:O94993 CleanEx:HS_SOX30
Genevestigator:O94993 GermOnline:ENSG00000039600 Uniprot:O94993
Length = 753
Score = 184 (69.8 bits), Expect = 7.8e-12, P = 7.8e-12
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
VKRPMNAFMVW+R R +A+ NP +N+EIS +LG EW L+E+ K+P+ DEA++++
Sbjct: 337 VKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEK 396
Query: 143 HMKE 146
H +E
Sbjct: 397 HREE 400
>UNIPROTKB|F1MAJ5 [details] [associations]
symbol:Sox6 "Protein Sox6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
InterPro:IPR009071 InterPro:IPR027153 Pfam:PF00505 RGD:1309000
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 PANTHER:PTHR10270:SF89 IPI:IPI00371181
Ensembl:ENSRNOT00000048020 ArrayExpress:F1MAJ5 Uniprot:F1MAJ5
Length = 789
Score = 184 (69.8 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLG--AEWKLLNEQAKRPFIDEAKRLR 140
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG + WK ++ Q K+P+ +E RL
Sbjct: 580 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGNGSRWKSMSNQEKQPYYEEQARLS 639
Query: 141 AVHMKEH 147
+H++++
Sbjct: 640 KIHLEKY 646
>UNIPROTKB|A4FUB3 [details] [associations]
symbol:SOX5 "SOX5 protein" species:9913 "Bos taurus"
[GO:2000741 "positive regulation of mesenchymal stem cell
differentiation" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:0061036
"positive regulation of cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0048709 "oligodendrocyte differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005634 GO:GO:0045892 GO:GO:0071560 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212 GO:GO:0032332
GO:GO:0051216 GO:GO:0048709 GO:GO:0045165 GO:GO:0061036
GO:GO:0060164 GO:GO:0021953 GeneTree:ENSGT00690000101789
HOVERGEN:HBG003915 KO:K09269 HOGENOM:HOG000056455 CTD:6660
eggNOG:NOG253815 OMA:PSEHSSM OrthoDB:EOG42BX84 GO:GO:2000741
EMBL:DAAA02014069 EMBL:DAAA02014070 EMBL:DAAA02014071
EMBL:DAAA02014072 EMBL:DAAA02014073 EMBL:DAAA02014074 EMBL:BC114658
IPI:IPI00704971 RefSeq:NP_001076940.1 UniGene:Bt.32918 SMR:A4FUB3
STRING:A4FUB3 Ensembl:ENSBTAT00000030260 GeneID:533829
KEGG:bta:533829 InParanoid:A4FUB3 NextBio:20876164 Uniprot:A4FUB3
Length = 728
Score = 183 (69.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + K+P+ +E RL
Sbjct: 521 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 580
Query: 143 HMKEH 147
H++++
Sbjct: 581 HLEKY 585
>UNIPROTKB|P35711 [details] [associations]
symbol:SOX5 "Transcription factor SOX-5" species:9606 "Homo
sapiens" [GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0032332
"positive regulation of chondrocyte differentiation" evidence=IDA]
[GO:0061036 "positive regulation of cartilage development"
evidence=IDA] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IDA] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634 GO:GO:0045892
GO:GO:0071560 GO:GO:0001701 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0006366 GO:GO:0032332 GO:GO:0051216
GO:GO:0048709 GO:GO:0045165 GO:GO:0061036 GO:GO:0060164
GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269 EMBL:AB081588
EMBL:AB081589 EMBL:AB081590 EMBL:AB081591 EMBL:AK074317
EMBL:AK098610 EMBL:AK303970 EMBL:AC087244 EMBL:AC087260
EMBL:AC087319 EMBL:AC092864 EMBL:BC029220 EMBL:BC035227
EMBL:BC047665 EMBL:BC060773 EMBL:S83308 EMBL:X65662 IPI:IPI00166143
IPI:IPI00171247 IPI:IPI00216317 IPI:IPI00221270 IPI:IPI01010805
PIR:S22939 RefSeq:NP_001248343.1 RefSeq:NP_001248344.1
RefSeq:NP_008871.3 RefSeq:NP_694534.1 RefSeq:NP_821078.1
UniGene:Hs.657542 ProteinModelPortal:P35711 SMR:P35711
IntAct:P35711 MINT:MINT-1198407 STRING:P35711 PhosphoSite:P35711
DMDM:30179883 PRIDE:P35711 DNASU:6660 Ensembl:ENST00000309359
Ensembl:ENST00000381381 Ensembl:ENST00000396007
Ensembl:ENST00000451604 Ensembl:ENST00000541536
Ensembl:ENST00000545921 Ensembl:ENST00000546136 GeneID:6660
KEGG:hsa:6660 UCSC:uc001rfv.3 UCSC:uc001rfw.3 UCSC:uc001rfy.3
CTD:6660 GeneCards:GC12M023585 HGNC:HGNC:11201 MIM:604975
neXtProt:NX_P35711 PharmGKB:PA36038 eggNOG:NOG253815
InParanoid:P35711 OMA:PSEHSSM OrthoDB:EOG42BX84 PhylomeDB:P35711
ChiTaRS:SOX5 GenomeRNAi:6660 NextBio:25963 ArrayExpress:P35711
Bgee:P35711 Genevestigator:P35711 GermOnline:ENSG00000134532
GO:GO:2000741 Uniprot:P35711
Length = 763
Score = 183 (69.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + K+P+ +E RL
Sbjct: 556 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 615
Query: 143 HMKEH 147
H++++
Sbjct: 616 HLEKY 620
>MGI|MGI:98367 [details] [associations]
symbol:Sox5 "SRY-box containing gene 5" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IGI;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0021953 "central
nervous system neuron differentiation" evidence=IGI] [GO:0032332
"positive regulation of chondrocyte differentiation"
evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048709 "oligodendrocyte differentiation" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IGI] [GO:0060164
"regulation of timing of neuron differentiation" evidence=IMP]
[GO:0061036 "positive regulation of cartilage development"
evidence=ISO] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=ISO] [GO:2000741 "positive
regulation of mesenchymal stem cell differentiation" evidence=ISO]
InterPro:IPR009071 MGI:MGI:98367 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0006355 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0044212
GO:GO:0032332 GO:GO:0051216 GO:GO:0048709 GO:GO:0045165
GO:GO:0060164 GO:GO:0021953 HOVERGEN:HBG003915 KO:K09269
HOGENOM:HOG000056455 CTD:6660 eggNOG:NOG253815 OrthoDB:EOG42BX84
EMBL:X65657 EMBL:X65658 EMBL:AB006330 EMBL:AJ010604 IPI:IPI00128018
IPI:IPI00466410 IPI:IPI00467353 PIR:S25195 RefSeq:NP_001230092.1
UniGene:Mm.1752 PDB:1I11 PDBsum:1I11 ProteinModelPortal:P35710
SMR:P35710 IntAct:P35710 STRING:P35710 PhosphoSite:P35710
PRIDE:P35710 Ensembl:ENSMUST00000111748 GeneID:20678 KEGG:mmu:20678
InParanoid:P35710 EvolutionaryTrace:P35710 NextBio:299173
Bgee:P35710 CleanEx:MM_SOX5 Genevestigator:P35710
GermOnline:ENSMUSG00000041540 Uniprot:P35710
Length = 763
Score = 183 (69.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + K+P+ +E RL
Sbjct: 556 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQ 615
Query: 143 HMKEH 147
H++++
Sbjct: 616 HLEKY 620
>UNIPROTKB|P40647 [details] [associations]
symbol:sox5 "Transcription factor Sox-5" species:8355
"Xenopus laevis" [GO:0090263 "positive regulation of canonical Wnt
receptor signaling pathway" evidence=IDA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0090263 HOVERGEN:HBG003915 KO:K09269 CTD:6660
EMBL:BC142559 EMBL:DR718509 EMBL:X65653 PIR:S22949
RefSeq:NP_001167508.1 UniGene:Xl.21446 UniGene:Xl.85854
GeneID:100381154 KEGG:xla:100381154 Xenbase:XB-GENE-865667
Uniprot:P40647
Length = 757
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK LG+ WK + K+P+ +E RL
Sbjct: 559 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYEEQARLSKQ 618
Query: 143 HMKEH 147
H++++
Sbjct: 619 HLEKY 623
>UNIPROTKB|F1NNF2 [details] [associations]
symbol:SOX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0032332 "positive regulation of chondrocyte
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048709 "oligodendrocyte differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0060164 "regulation of timing of neuron differentiation"
evidence=IEA] [GO:0061036 "positive regulation of cartilage
development" evidence=IEA] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IEA] [GO:2000741
"positive regulation of mesenchymal stem cell differentiation"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0045892 GO:GO:0071560 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0044212 GO:GO:0032332 GO:GO:0045165 GO:GO:0061036
GeneTree:ENSGT00690000101789 OMA:PSEHSSM GO:GO:2000741
EMBL:AADN02006625 EMBL:AADN02006626 EMBL:AADN02006627
EMBL:AADN02006628 EMBL:AADN02006629 IPI:IPI00574856
Ensembl:ENSGALT00000037410 ArrayExpress:F1NNF2 Uniprot:F1NNF2
Length = 762
Score = 174 (66.3 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRL-GAEWKLLNEQAKRPFIDEAKRLRA 141
+KRPMNAFMVW++ +RRK+ Q P MHNS ISK L G+ WK + K+P+ +E RL
Sbjct: 554 IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILAGSRWKAMTNLEKQPYYEEQARLSK 613
Query: 142 VHMKEH 147
H++++
Sbjct: 614 QHLEKY 619
>UNIPROTKB|F1NJ38 [details] [associations]
symbol:F1NJ38 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR009071
Pfam:PF00505 GO:GO:0005634 GO:GO:0043565 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00690000101789 OMA:TMVNCTV EMBL:AADN02044887
EMBL:AADN02044888 IPI:IPI00584532 Ensembl:ENSGALT00000000813
Uniprot:F1NJ38
Length = 491
Score = 168 (64.2 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
+ +KRPMNAFMVW++ +RRK+ Q P MHNS ISK L W + Q K+P+ +E RL
Sbjct: 297 NHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILTQLWGGMTNQEKQPYYEEQARLS 356
Query: 141 AVHMKEH 147
H++++
Sbjct: 357 RQHLEKY 363
>UNIPROTKB|I3LK63 [details] [associations]
symbol:SOX12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0065004 "protein-DNA complex assembly" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0032993
"protein-DNA complex" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] InterPro:IPR009071 Pfam:PF00505 GO:GO:0001077
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0021510 GO:GO:0000976 GO:GO:0001105 GO:GO:0045165
GO:GO:0032993 GO:GO:0065004 GeneTree:ENSGT00690000101789
OMA:VQQRGAR EMBL:CU606854 Ensembl:ENSSSCT00000029854 Uniprot:I3LK63
Length = 261
Score = 136 (52.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGA 119
+KRPMNAFMVWS+ +RRK+ + P MHN+EISKRL A
Sbjct: 40 IKRPMNAFMVWSQHERRKIMEQWPDMHNAEISKRLAA 76
Score = 42 (19.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 332 LPPNSTDLHLVKREYSSPNGAPPNAGDLR 360
LPP S H +Y +P AGD R
Sbjct: 222 LPPPSGTSHFEFPDYCTPEVTEMIAGDWR 250
>ASPGD|ASPL0000037691 [details] [associations]
symbol:AN2885 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008301 "DNA binding, bending" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0070898 "RNA
polymerase III transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
GO:GO:0005694 GO:GO:0006355 GO:GO:0043565 GO:GO:0006281
EMBL:BN001306 GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
EMBL:AACD01000051 GO:GO:0031491 HOGENOM:HOG000197861 GO:GO:0051123
GO:GO:0032301 OMA:FFANDNR OrthoDB:EOG4S7P0P GO:GO:0034724
GO:GO:0070898 RefSeq:XP_660489.1 ProteinModelPortal:Q5B995
SMR:Q5B995 STRING:Q5B995 EnsemblFungi:CADANIAT00010204
GeneID:2874036 KEGG:ani:AN2885.2 Uniprot:Q5B995
Length = 106
Score = 105 (42.0 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 17/53 (32%), Positives = 36/53 (67%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEA 136
KR ++A+M ++ R K+ ++NP + ++ K LG +WK L+++ ++P+ D+A
Sbjct: 28 KRGLSAYMFFANDNRDKVREENPGISFGQVGKMLGEKWKSLSDKERKPYEDKA 80
>ZFIN|ZDB-GENE-031118-9 [details] [associations]
symbol:ssrp1a "structure specific recognition protein
1a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
Pfam:PF03531 ZFIN:ZDB-GENE-031118-9 GO:GO:0005634 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GeneTree:ENSGT00700000104547
InterPro:IPR013719 Pfam:PF08512 InterPro:IPR024954 EMBL:BX510356
IPI:IPI00487997 Ensembl:ENSDART00000137795 ArrayExpress:F1QEB4
Bgee:F1QEB4 Uniprot:F1QEB4
Length = 705
Score = 129 (50.5 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPF---IDEAKRLR 140
KRPM+A+M+W G R ++ +NP + +EISK+ G WK L + K + +EAKR
Sbjct: 547 KRPMSAYMLWLNGNRERIKSENPGISITEISKKAGEMWKQLGKDKKEEWDKKAEEAKRQY 606
Query: 141 AVHMKEH 147
MKE+
Sbjct: 607 EKAMKEY 613
>UNIPROTKB|C9JQA7 [details] [associations]
symbol:HMG20B "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily E member
1-related" species:9606 "Homo sapiens" [GO:0033234 "negative
regulation of protein sumoylation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC005786 HOGENOM:HOG000247029
HGNC:HGNC:5002 ChiTaRS:HMG20B EMBL:AC116968 IPI:IPI00878211
ProteinModelPortal:C9JQA7 SMR:C9JQA7 STRING:C9JQA7
Ensembl:ENST00000453933 ArrayExpress:C9JQA7 Bgee:C9JQA7
Uniprot:C9JQA7
Length = 142
Score = 103 (41.3 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
K P+ ++ + +R ++ +P + EI+K LGAEW L K+ ++DEA+R + +
Sbjct: 71 KAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQY 130
Query: 144 MKE 146
MKE
Sbjct: 131 MKE 133
>UNIPROTKB|Q96RK0 [details] [associations]
symbol:CIC "Protein capicua homolog" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR009071 Pfam:PF00505 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 eggNOG:NOG12793
CTD:23152 EMBL:AF363689 EMBL:AC006486 EMBL:AB002304 IPI:IPI00045360
RefSeq:NP_055940.3 UniGene:Hs.388236 ProteinModelPortal:Q96RK0
SMR:Q96RK0 IntAct:Q96RK0 MINT:MINT-2856152 STRING:Q96RK0
PhosphoSite:Q96RK0 DMDM:116241300 PaxDb:Q96RK0 PRIDE:Q96RK0
DNASU:23152 Ensembl:ENST00000160740 GeneID:23152 KEGG:hsa:23152
UCSC:uc002otf.1 GeneCards:GC19P042772 H-InvDB:HIX0015175
H-InvDB:HIX0137483 HGNC:HGNC:14214 HPA:CAB026388 MIM:612082
neXtProt:NX_Q96RK0 PharmGKB:PA26513 HOVERGEN:HBG081174
InParanoid:Q96RK0 OMA:DGCMKES PhylomeDB:Q96RK0 ChiTaRS:CIC
GenomeRNAi:23152 NextBio:44481 Bgee:Q96RK0 CleanEx:HS_CIC
Genevestigator:Q96RK0 GermOnline:ENSG00000079432 Uniprot:Q96RK0
Length = 1608
Score = 130 (50.8 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D ++RPMNAFM++S+ R + Q +P N +SK LG W L + K+ + D A +++
Sbjct: 198 DHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVK 257
Query: 141 AVHMKEH 147
H K H
Sbjct: 258 EAHFKAH 264
Score = 43 (20.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 319 LHLVKREYGSP--NGLPPNSTDLHLVKREYSSPNG-APP 354
L LV + P NG P S + L S+P+G PP
Sbjct: 942 LPLVSPPFSVPVQNGAQPPSKIIQLTPVPVSTPSGLVPP 980
>FB|FBgn0004362 [details] [associations]
symbol:HmgD "High mobility group protein D" species:7227
"Drosophila melanogaster" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0006325 "chromatin organization" evidence=IDA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0008301 "DNA
binding, bending" evidence=IDA;NAS] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] InterPro:IPR009071 Pfam:PF00505 EMBL:AE013599
GO:GO:0005634 GO:GO:0005694 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0048813
GO:GO:0007517 GO:GO:0006325 GO:GO:0003680 eggNOG:NOG320947
EMBL:M77023 EMBL:X71138 EMBL:AM294353 EMBL:AM294354 EMBL:AM294355
EMBL:AM294356 EMBL:AM294357 EMBL:AM294358 EMBL:AM294359
EMBL:AM294360 EMBL:AM294361 EMBL:AM294362 EMBL:AM294363
EMBL:AY118333 PIR:A44382 RefSeq:NP_001163244.1 RefSeq:NP_726109.1
RefSeq:NP_726110.1 UniGene:Dm.7318 PDB:1E7J PDB:1HMA PDB:1QRV
PDB:3NM9 PDBsum:1E7J PDBsum:1HMA PDBsum:1QRV PDBsum:3NM9
ProteinModelPortal:Q05783 SMR:Q05783 DIP:DIP-22805N IntAct:Q05783
MINT:MINT-843935 STRING:Q05783 PaxDb:Q05783 PRIDE:Q05783
EnsemblMetazoa:FBtr0071708 EnsemblMetazoa:FBtr0071709
EnsemblMetazoa:FBtr0301410 GeneID:37481 KEGG:dme:Dmel_CG17950
CTD:37481 FlyBase:FBgn0004362 GeneTree:ENSGT00700000104547
InParanoid:Q05783 OMA:WRAMSEQ OrthoDB:EOG4TX98R PhylomeDB:Q05783
ChiTaRS:HmgD EvolutionaryTrace:Q05783 GenomeRNAi:37481
NextBio:803865 Bgee:Q05783 GermOnline:CG17950 Uniprot:Q05783
Length = 112
Score = 100 (40.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAK 129
D+ KRP++A+M+W R + ++NP + +E++KR G W+ + ++++
Sbjct: 3 DKPKRPLSAYMLWLNSARESIKRENPGIKVTEVAKRGGELWRAMKDKSE 51
>FB|FBgn0010228 [details] [associations]
symbol:HmgZ "HMG protein Z" species:7227 "Drosophila
melanogaster" [GO:0003677 "DNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=NAS] InterPro:IPR009071 Pfam:PF00505
EMBL:AE013599 GO:GO:0005634 GO:GO:0005694 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
eggNOG:NOG320947 GeneTree:ENSGT00700000104547 EMBL:X71139
EMBL:AY113439 PIR:S41765 RefSeq:NP_726106.1 RefSeq:NP_726107.1
UniGene:Dm.20604 ProteinModelPortal:Q06943 SMR:Q06943 PaxDb:Q06943
PRIDE:Q06943 EnsemblMetazoa:FBtr0071673 EnsemblMetazoa:FBtr0071674
GeneID:37480 KEGG:dme:Dmel_CG17921 CTD:37480 FlyBase:FBgn0010228
InParanoid:Q06943 OMA:EANGGTD OrthoDB:EOG4W0VWS PhylomeDB:Q06943
ChiTaRS:HmgZ GenomeRNAi:37480 NextBio:803858 Bgee:Q06943
GermOnline:CG17921 Uniprot:Q06943
Length = 111
Score = 100 (40.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAK 129
DR KRP++A+M+W R ++ +DNP ++I+KR G W+ L ++ +
Sbjct: 4 DRPKRPLSAYMLWLNETREQIKKDNPGSKVTDIAKRGGELWRGLKDKTE 52
>MGI|MGI:1918972 [details] [associations]
symbol:Cic "capicua homolog (Drosophila)" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR009071 MGI:MGI:1918972
Pfam:PF00505 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 eggNOG:NOG12793 GeneTree:ENSGT00530000063757
CTD:23152 HOVERGEN:HBG081174 OMA:DGCMKES ChiTaRS:CIC EMBL:AF363690
EMBL:AK004685 EMBL:AK147276 EMBL:AK147535 EMBL:AC156992
EMBL:BC040463 EMBL:BC058665 EMBL:AB093224 IPI:IPI00653910
IPI:IPI00974774 RefSeq:NP_001103601.1 RefSeq:NP_001103602.1
RefSeq:NP_082158.2 UniGene:Mm.28833 ProteinModelPortal:Q924A2
SMR:Q924A2 STRING:Q924A2 PhosphoSite:Q924A2 PaxDb:Q924A2
PRIDE:Q924A2 DNASU:71722 Ensembl:ENSMUST00000163320
Ensembl:ENSMUST00000169266 GeneID:71722 KEGG:mmu:71722
UCSC:uc009fsa.2 UCSC:uc009fsc.2 InParanoid:Q924A2 OrthoDB:EOG4K0QQN
NextBio:334331 Bgee:Q924A2 CleanEx:MM_CIC Genevestigator:Q924A2
GermOnline:ENSMUSG00000005442 Uniprot:Q924A2
Length = 2510
Score = 130 (50.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D ++RPMNAFM++S+ R + Q +P N +SK LG W L + K+ + D A +++
Sbjct: 1105 DHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVK 1164
Query: 141 AVHMKEH 147
H K H
Sbjct: 1165 EAHFKAH 1171
>POMBASE|SPAC57A10.09c [details] [associations]
symbol:nhp6 "High-mobility group non-histone chromatin
protein (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006359
"regulation of transcription from RNA polymerase III promoter"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] InterPro:IPR009071
PomBase:SPAC57A10.09c Pfam:PF00505 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0006351 GO:GO:0006338 eggNOG:COG5648
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0000790 GO:GO:0006334 GO:GO:0006359 HOGENOM:HOG000197861
OMA:LANPNNK OrthoDB:EOG4S7P0P PIR:T38936 RefSeq:NP_593314.1
ProteinModelPortal:P87057 STRING:P87057
EnsemblFungi:SPAC57A10.09c.1 GeneID:2542878 KEGG:spo:SPAC57A10.09c
NextBio:20803918 Uniprot:P87057
Length = 108
Score = 99 (39.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
KR M+AFM +S R KM DNP ++ LG WK L + P+ ++A++ + +
Sbjct: 17 KRNMSAFMFFSIENREKMKTDNPDATFGQLGSLLGKRWKELTSTEREPYEEKARQDKERY 76
Query: 144 MKE 146
+E
Sbjct: 77 ERE 79
>CGD|CAF0007020 [details] [associations]
symbol:NHP6A species:5476 "Candida albicans" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032301 "MutSalpha complex"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0034724 "DNA replication-independent nucleosome organization"
evidence=IEA] [GO:0070898 "RNA polymerase III transcriptional
preinitiation complex assembly" evidence=IEA] [GO:0051123 "RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008301 "DNA binding, bending" evidence=IEA] InterPro:IPR009071
CGD:CAF0007020 Pfam:PF00505 GO:GO:0005634 GO:GO:0005694
GO:GO:0006355 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
eggNOG:COG5648 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 EMBL:AACQ01000005 EMBL:AACQ01000006 EMBL:AF196333
ProteinModelPortal:Q9UVL1 SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
Length = 92
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D KR ++A+M ++ R + +NP + ++ K LG +WK LN + K P+ ++A+ +
Sbjct: 17 DAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADK 76
Query: 141 AVHMKE 146
+ KE
Sbjct: 77 KRYEKE 82
>UNIPROTKB|Q9UVL1 [details] [associations]
symbol:NHP6 "Non-histone chromosomal protein 6"
species:237561 "Candida albicans SC5314" [GO:0003677 "DNA binding"
evidence=IDA] InterPro:IPR009071 CGD:CAF0007020 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 eggNOG:COG5648 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AACQ01000005
EMBL:AACQ01000006 EMBL:AF196333 ProteinModelPortal:Q9UVL1
SMR:Q9UVL1 STRING:Q9UVL1 Uniprot:Q9UVL1
Length = 92
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 20/66 (30%), Positives = 38/66 (57%)
Query: 81 DRVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
D KR ++A+M ++ R + +NP + ++ K LG +WK LN + K P+ ++A+ +
Sbjct: 17 DAPKRSLSAYMFFANENRDIVRAENPGISFGQVGKLLGEKWKALNSEDKLPYENKAEADK 76
Query: 141 AVHMKE 146
+ KE
Sbjct: 77 KRYEKE 82
>SGD|S000006256 [details] [associations]
symbol:NHP6A "High-mobility group (HMG) protein, binds to and
remodels nucleosomes" species:4932 "Saccharomyces cerevisiae"
[GO:0032301 "MutSalpha complex" evidence=IDA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0070898 "RNA polymerase
III transcriptional preinitiation complex assembly"
evidence=IGI;IDA] [GO:0006338 "chromatin remodeling" evidence=IGI]
[GO:0034724 "DNA replication-independent nucleosome organization"
evidence=IDA] [GO:0051123 "RNA polymerase II transcriptional
preinitiation complex assembly" evidence=IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0008301 "DNA binding, bending"
evidence=IDA] [GO:0031491 "nucleosome binding" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IC] InterPro:IPR009071 SGD:S000006256 Pfam:PF00505
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0043565
GO:GO:0006338 eggNOG:COG5648 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:Z71255 EMBL:BK006949 GO:GO:0031491 EMBL:Z49219
GeneTree:ENSGT00560000076898 HOGENOM:HOG000197861 GO:GO:0051123
EMBL:M95912 EMBL:X15317 EMBL:AY693230 PIR:A35072 RefSeq:NP_015377.1
PDB:1CG7 PDB:1J5N PDB:1LWM PDBsum:1CG7 PDBsum:1J5N PDBsum:1LWM
DisProt:DP00432 ProteinModelPortal:P11632 SMR:P11632 IntAct:P11632
MINT:MINT-2785986 STRING:P11632 PaxDb:P11632 PeptideAtlas:P11632
EnsemblFungi:YPR052C GeneID:856165 KEGG:sce:YPR052C CYGD:YPR052c
OMA:FFANDNR OrthoDB:EOG4S7P0P EvolutionaryTrace:P11632
NextBio:981313 Genevestigator:P11632 GermOnline:YPR052C
GO:GO:0034724 GO:GO:0070898 Uniprot:P11632
Length = 93
Score = 93 (37.8 bits), Expect = 0.00045, P = 0.00045
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAK 137
KR ++A+M ++ R + +NP + ++ K+LG +WK L + K+P+ EAK
Sbjct: 22 KRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPY--EAK 73
>SGD|S000004676 [details] [associations]
symbol:ABF2 "Mitochondrial DNA-binding protein" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0090139
"mitochondrial DNA packaging" evidence=IMP] [GO:0000001
"mitochondrion inheritance" evidence=IMP] [GO:0000002
"mitochondrial genome maintenance" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0000262 "mitochondrial chromosome"
evidence=IDA] [GO:0008301 "DNA binding, bending" evidence=IDA]
[GO:0042645 "mitochondrial nucleoid" evidence=IDA]
InterPro:IPR009071 SGD:S000004676 Pfam:PF00505 GO:GO:0005634
EMBL:M73753 EMBL:AJ223169 EMBL:Z48952 EMBL:AY557967 EMBL:BK006946
PIR:A41302 RefSeq:NP_013788.1 ProteinModelPortal:Q02486 SMR:Q02486
DIP:DIP-5492N IntAct:Q02486 MINT:MINT-505363 STRING:Q02486
PaxDb:Q02486 PeptideAtlas:Q02486 EnsemblFungi:YMR072W GeneID:855094
KEGG:sce:YMR072W CYGD:YMR072w eggNOG:COG5648
GeneTree:ENSGT00680000100562 OMA:FHESSKP OrthoDB:EOG483HF0
NextBio:978405 Genevestigator:Q02486 GermOnline:YMR072W
GO:GO:0000262 GO:GO:0008301 GO:GO:0090139 GO:GO:0000001
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Uniprot:Q02486
Length = 183
Score = 107 (42.7 bits), Expect = 0.00047, P = 0.00047
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
KRP +A+ ++ + R + ++NP + +EISK G +W+ L K +I E K+L + +
Sbjct: 44 KRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKLYSEY 103
Query: 144 MK 145
K
Sbjct: 104 QK 105
>UNIPROTKB|C9J8X5 [details] [associations]
symbol:HMG20B "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily E member
1-related" species:9606 "Homo sapiens" [GO:0033234 "negative
regulation of protein sumoylation" evidence=IEA] [GO:0045666
"positive regulation of neuron differentiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR009071 Pfam:PF00505 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 EMBL:AC005786 HOGENOM:HOG000247029
OrthoDB:EOG4G7C05 HGNC:HGNC:5002 ChiTaRS:HMG20B EMBL:AC116968
IPI:IPI00877739 ProteinModelPortal:C9J8X5 SMR:C9J8X5 STRING:C9J8X5
Ensembl:ENST00000416526 ArrayExpress:C9J8X5 Bgee:C9J8X5
Uniprot:C9J8X5
Length = 215
Score = 103 (41.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
K P+ ++ + +R ++ +P + EI+K LGAEW L K+ ++DEA+R + +
Sbjct: 71 KAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQY 130
Query: 144 MKE 146
MKE
Sbjct: 131 MKE 133
Score = 40 (19.1 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 217 YMMDPATYQQHSAYTTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYG 263
YM + YQQ AY + + SS +N+ +NG G
Sbjct: 130 YMKELRAYQQSEAYKM-CTEKIQEKKIKKEDSSSGLMNTLLNGHKGG 175
>UNIPROTKB|E9PES6 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00411540
ProteinModelPortal:E9PES6 SMR:E9PES6 Ensembl:ENST00000430118
ArrayExpress:E9PES6 Bgee:E9PES6 Uniprot:E9PES6
Length = 153
Score = 102 (41.0 bits), Expect = 0.00064, P = 0.00064
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLR 140
KRP + F ++ R K+ NP + +++K+LG W LN+ K+P+I +A +L+
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLK 150
>UNIPROTKB|B6ZLK1 [details] [associations]
symbol:SSRP1 "Structure-specific recognition protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887
Pfam:PF00505 Pfam:PF03531 GO:GO:0005634 GO:GO:0005737
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104547 InterPro:IPR013719 Pfam:PF08512
InterPro:IPR024954 OMA:PVEVKKG IPI:IPI00582237 UniGene:Gga.2985
HOVERGEN:HBG002932 EMBL:AADN02050757 EMBL:AADN02050758
EMBL:AB465209 STRING:B6ZLK1 Ensembl:ENSGALT00000012159
Ensembl:ENSGALT00000038738 Uniprot:B6ZLK1
Length = 706
Score = 116 (45.9 bits), Expect = 0.00071, P = 0.00070
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPF---IDEAKRLR 140
KRPM+A+M+W R K+ D+P + +++SK+ G WK ++++ K + ++AKR
Sbjct: 546 KRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDY 605
Query: 141 AVHMKEH 147
MKE+
Sbjct: 606 EKAMKEY 612
>UNIPROTKB|Q04678 [details] [associations]
symbol:SSRP1 "FACT complex subunit SSRP1" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] InterPro:IPR009071
InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505 Pfam:PF03531
GO:GO:0005694 GO:GO:0005730 GO:GO:0006355 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512 eggNOG:COG5165
KO:K09272 InterPro:IPR024954 HOGENOM:HOG000180790 EMBL:AJ719641
EMBL:L08815 EMBL:D14315 IPI:IPI00582237 PIR:S78050
RefSeq:NP_001005796.1 UniGene:Gga.2985 ProteinModelPortal:Q04678
STRING:Q04678 PRIDE:Q04678 GeneID:396509 KEGG:gga:396509 CTD:6749
HOVERGEN:HBG002932 InParanoid:Q04678 OrthoDB:EOG41VK2K
NextBio:20816548 Uniprot:Q04678
Length = 706
Score = 116 (45.9 bits), Expect = 0.00071, P = 0.00070
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPF---IDEAKRLR 140
KRPM+A+M+W R K+ D+P + +++SK+ G WK ++++ K + ++AKR
Sbjct: 546 KRPMSAYMLWLNANREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDAKRDY 605
Query: 141 AVHMKEH 147
MKE+
Sbjct: 606 EKAMKEY 612
>UNIPROTKB|E7ES08 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00643317
ProteinModelPortal:E7ES08 SMR:E7ES08 PRIDE:E7ES08
Ensembl:ENST00000419110 ArrayExpress:E7ES08 Bgee:E7ES08
Uniprot:E7ES08
Length = 188
Score = 106 (42.4 bits), Expect = 0.00073, P = 0.00073
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
KRP + F ++ R K+ NP + +++K+LG W LN+ K+P+I +A +L+ +
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
Query: 144 MKE 146
K+
Sbjct: 154 EKD 156
>UNIPROTKB|E7EQU1 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR009071 InterPro:IPR017967
PROSITE:PS00353 Pfam:PF00505 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
Pfam:PF09011 EMBL:AF003626 HGNC:HGNC:5004 IPI:IPI00640781
ProteinModelPortal:E7EQU1 SMR:E7EQU1 PRIDE:E7EQU1
Ensembl:ENST00000455596 ArrayExpress:E7EQU1 Bgee:E7EQU1
Uniprot:E7EQU1
Length = 193
Score = 106 (42.4 bits), Expect = 0.00081, P = 0.00081
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
KRP + F ++ R K+ NP + +++K+LG W LN+ K+P+I +A +L+ +
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
Query: 144 MKE 146
K+
Sbjct: 154 EKD 156
>UNIPROTKB|Q5JRY4 [details] [associations]
symbol:TCF7L2 "Transcription factor 7-like 2" species:9606
"Homo sapiens" [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] InterPro:IPR009071 InterPro:IPR024940 Pfam:PF00505
GO:GO:0016055 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 HOGENOM:HOG000116032 HOVERGEN:HBG000419
PANTHER:PTHR10373 EMBL:AL135792 EMBL:AL158212 EMBL:AL445486
EMBL:AL451084 UniGene:Hs.593995 HGNC:HGNC:11641 ChiTaRS:TCF7L2
IPI:IPI00944473 SMR:Q5JRY4 Ensembl:ENST00000369389 Uniprot:Q5JRY4
Length = 176
Score = 98 (39.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 83 VKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAV 142
+K+P+NAFM++ + R K+ + ++ I++ LG W L+ + + + + A++ R +
Sbjct: 61 IKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQL 120
Query: 143 HMK 145
HM+
Sbjct: 121 HMQ 123
Score = 39 (18.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 13 IPPHHHLSSYG 23
+PPHH L + G
Sbjct: 9 VPPHHTLHTTG 19
>UNIPROTKB|E2R4Z8 [details] [associations]
symbol:HMG20B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IEA] [GO:0033234 "negative regulation of
protein sumoylation" evidence=IEA] InterPro:IPR009071 Pfam:PF00505
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GeneTree:ENSGT00700000104521 OMA:RLRKMNT EMBL:AAEX03012575
EMBL:AAEX03012576 Ensembl:ENSCAFT00000030501 Uniprot:E2R4Z8
Length = 316
Score = 103 (41.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
K P+ ++ + +R ++ +P + EI+K LGAEW L K+ ++DEA+R + +
Sbjct: 71 KAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEAEREKQQY 130
Query: 144 MKE 146
MKE
Sbjct: 131 MKE 133
Score = 45 (20.9 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 217 YMMDPATYQQHSAY---TTHMSSGYPRYDMTGMHPSSTSLNSYMNGSSYGMYT 266
YM + YQQ AY T + + + +G +T LN + G G T
Sbjct: 130 YMKELRAYQQSEAYKMCTEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGFST 182
>UNIPROTKB|Q9W602 [details] [associations]
symbol:ssrp1 "FACT complex subunit SSRP1" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR009071 InterPro:IPR000969 PRINTS:PR00887 Pfam:PF00505
Pfam:PF03531 GO:GO:0005694 GO:GO:0005730 GO:GO:0006355
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003677 GO:GO:0006260
GO:GO:0006281 GO:GO:0006351 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 InterPro:IPR013719 Pfam:PF08512
KO:K09272 InterPro:IPR024954 CTD:6749 HOVERGEN:HBG002932
EMBL:AB004793 EMBL:BC082613 RefSeq:NP_001084164.1 UniGene:Xl.336
ProteinModelPortal:Q9W602 PRIDE:Q9W602 GeneID:399344
KEGG:xla:399344 Xenbase:XB-GENE-994299 Uniprot:Q9W602
Length = 693
Score = 115 (45.5 bits), Expect = 0.00090, P = 0.00090
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPF---IDEAKRLR 140
KRPM+A+M+W R K+ +NP + +++SK+ G WK ++ K + +EAKR
Sbjct: 542 KRPMSAYMLWLNASREKIKSENPGISITDLSKKAGEIWKNMSRDKKEEWDRRAEEAKRDY 601
Query: 141 AVHMKEH 147
MKE+
Sbjct: 602 EKAMKEY 608
>UNIPROTKB|O15347 [details] [associations]
symbol:HMGB3 "High mobility group protein B3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0008301 "DNA binding, bending" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=TAS]
InterPro:IPR009071 InterPro:IPR017967 PROSITE:PS00353 Pfam:PF00505
GO:GO:0007275 GO:GO:0005634 GO:GO:0005694 GO:GO:0008301
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006310 GO:GO:0003690 Pfam:PF09011 HOGENOM:HOG000197861
HOVERGEN:HBG009000 OrthoDB:EOG4TTGK2 eggNOG:NOG320947 CTD:3149
KO:K11296 OMA:DNEKQPY EMBL:Y10043 EMBL:AF003626 EMBL:BC070482
IPI:IPI00217477 RefSeq:NP_005333.2 UniGene:Hs.19114 PDB:2EQZ
PDB:2YQI PDBsum:2EQZ PDBsum:2YQI ProteinModelPortal:O15347
SMR:O15347 IntAct:O15347 STRING:O15347 PhosphoSite:O15347
PaxDb:O15347 PeptideAtlas:O15347 PRIDE:O15347 DNASU:3149
Ensembl:ENST00000325307 Ensembl:ENST00000448905 GeneID:3149
KEGG:hsa:3149 UCSC:uc004fep.3 GeneCards:GC0XP150148 HGNC:HGNC:5004
MIM:300193 neXtProt:NX_O15347 PharmGKB:PA35092 InParanoid:O15347
PhylomeDB:O15347 EvolutionaryTrace:O15347 GenomeRNAi:3149
NextBio:12480 ArrayExpress:O15347 Bgee:O15347 CleanEx:HS_HMGB3
Genevestigator:O15347 GermOnline:ENSG00000029993 Uniprot:O15347
Length = 200
Score = 106 (42.4 bits), Expect = 0.00093, P = 0.00093
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPFIDEAKRLRAVH 143
KRP + F ++ R K+ NP + +++K+LG W LN+ K+P+I +A +L+ +
Sbjct: 94 KRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDSEKQPYITKAAKLKEKY 153
Query: 144 MKE 146
K+
Sbjct: 154 EKD 156
>UNIPROTKB|G4MS97 [details] [associations]
symbol:MGG_04489 "Non-histone chromosomal protein 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR009071 Pfam:PF00505
GO:GO:0043565 GO:GO:0006338 GO:GO:0008301 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 EMBL:CM001231
GO:GO:0031491 GO:GO:0051123 GO:GO:0032301 GO:GO:0034724
GO:GO:0070898 RefSeq:XP_003710967.1 ProteinModelPortal:G4MS97
SMR:G4MS97 EnsemblFungi:MGG_04489T0 GeneID:2678075
KEGG:mgr:MGG_04489 Uniprot:G4MS97
Length = 101
Score = 90 (36.7 bits), Expect = 0.00096, P = 0.00096
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 84 KRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLNEQAKRPF 132
KR ++A+M ++ QR + ++NP + ++ K LG WK L+++ + P+
Sbjct: 25 KRGLSAYMFFANEQRDNVREENPGVTFGQVGKILGERWKALSDKQRAPY 73
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.129 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 396 272 0.00099 114 3 11 23 0.39 34
32 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 231
No. of states in DFA: 599 (64 KB)
Total size of DFA: 205 KB (2113 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 20.83u 0.07s 20.90t Elapsed: 00:00:19
Total cpu time: 20.86u 0.07s 20.93t Elapsed: 00:00:36
Start: Thu Aug 15 12:42:52 2013 End: Thu Aug 15 12:43:28 2013
WARNINGS ISSUED: 1