Diaphorina citri psyllid: psy13345

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270------
MSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKIEWMSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKVPSPKVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRTSPGTLARDLIELGGNRTLTLQVKKRIRLEGEELEEYQKKKDKEAKDKQEKEKIPPHDTSFINELQLSDFKQTLQRNGIDCEFMDGVLICCRGTVAVRRVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRNRADDSDSNVIVLEGCLSDEYYRVQQLLYDQYAIL
cHHHHHHHccccccccEEEcccHHHHHHHHHHHHHHHcHHHHHHHHcccccccccccccccccHHHHHcccccEEEEEcccccccccHHHHHHHHccccccEEEEEcccccccHHHHHHHccccccEEEccEEEEEEEHHEEHHHHcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHccccEEEcccEEEEcccEEEEccccccccccccccccHHHHHHHccccccccCEEcccccccccccEEEccccccHHHHHHHHHHHHHHccc
MSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKIEWMSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKVPSPKVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRTSPGTLARDLIELGGNRTLTLQVKKRIRLEGEELEEYQKKKDK*****************FINELQLSDFKQTLQRNGIDCEFMDGVLICCRGTVAVRRVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRNRADDSDSNVIVLEGCLSDEYYRVQQLLYDQYAIL
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MSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKIEWMSDKLMKSFEGARNNPFHFKHVKLCHSLAELAKVPSPKVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRTSPGTLARDLIELGGNRTLTLQVKKRxxxxxxxxxxxxxxxxxxxxxxxxxxxxPPHDTSFINELQLSDFKQTLQRNGIDCEFMDGVLICCRGTVAVRRVVLVSTPDMECGFSRDLFFQWCSSPENSIIITNRNRADDSDSNVIVLEGCLSDEYYRVQQLLYDQYAIL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005847 [CC]mRNA cleavage and polyadenylation specificity factor complexprobableGO:0005849, GO:0031974, GO:0043229, GO:0043227, GO:0043226, GO:0005575, GO:0031981, GO:0005634, GO:0005654, GO:0044451, GO:0043234, GO:0032991, GO:0043231, GO:0043233, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0070013, GO:0044428, GO:0044424, GO:0044422
GO:0006398 [BP]histone mRNA 3'-end processingprobableGO:0008334, GO:0090304, GO:0034641, GO:0006807, GO:1901360, GO:0006139, GO:0044260, GO:0071704, GO:0010467, GO:0044238, GO:0031124, GO:0009987, GO:0006725, GO:0031123, GO:0008150, GO:0008152, GO:0046483, GO:0016070, GO:0016071, GO:0044237, GO:0043170, GO:0006396, GO:0006397
GO:0044763 [BP]single-organism cellular processprobableGO:0009987, GO:0008150, GO:0044699

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I7T, chain A
Confidence level:very confident
Coverage over the Query: 4-23,55-206
View the alignment between query and template
View the model in PyMOL
Template: 2I7T, chain A
Confidence level:confident
Coverage over the Query: 203-252
View the alignment between query and template
View the model in PyMOL