BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13346
(238 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1
SV=1
Length = 396
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 103/143 (72%), Gaps = 7/143 (4%)
Query: 98 STLRPIVIYY-EPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIR 156
+T R +VI Y EP +A++P + +WRLYPFKN + LP+MYIHRQSAY++GR+ +++DI I
Sbjct: 237 NTFRGVVIKYSEPPEARIPKK-RWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPID 295
Query: 157 HCSCSNQHAVLQYRELSLNNT-----RVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
H SCS QHAV QYR + R V+PY++DL S NGTF+N +I P Y EL E
Sbjct: 296 HPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEK 355
Query: 212 DVIEFGLSTREYVLLHQNSECLQ 234
DV++FG S+REYVLLH++S+ +
Sbjct: 356 DVLKFGFSSREYVLLHESSDTSE 378
>sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1
PE=2 SV=1
Length = 389
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 7/141 (4%)
Query: 98 STLRPIVIYY-EPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIR 156
+T R +VI Y EP +A++P + +WRLYPFKN + LP+MYIHRQSAY++GR+ +++DI I
Sbjct: 228 NTFRGVVIKYSEPPEARIPKK-RWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPID 286
Query: 157 HCSCSNQHAVLQYRELSLNNT-----RVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
H SCS QHAV QYR + R V+PY++DL S NGTF+N +I P Y EL E
Sbjct: 287 HPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEK 346
Query: 212 DVIEFGLSTREYVLLHQNSEC 232
DV++FG S+REYVLLH++S+
Sbjct: 347 DVLKFGFSSREYVLLHESSDT 367
>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1
SV=1
Length = 383
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 7/141 (4%)
Query: 98 STLRPIVIYY-EPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIR 156
+T R +VI Y EP +A++P + +WRLYPFKN + LP+MYIHRQSAY++GR+ +++DI I
Sbjct: 224 NTFRGVVIKYSEPPEARIPKK-RWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPID 282
Query: 157 HCSCSNQHAVLQYRELSLNNT-----RVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
H SCS QHAV QYR + R V+PY++DL S NGTF+N +I P Y EL E
Sbjct: 283 HPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEK 342
Query: 212 DVIEFGLSTREYVLLHQNSEC 232
DV++FG S+REYVLLH++S+
Sbjct: 343 DVLKFGFSSREYVLLHESSDT 363
>sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL
PE=1 SV=1
Length = 314
Score = 135 bits (339), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 90/134 (67%), Gaps = 7/134 (5%)
Query: 103 IVIYYEPKDAKLPSQYKWRLYPFKNHQPL-PIMYIHRQSAYIIGRNAKVSDILIRHCSCS 161
+++ EP +A+ PS+ +WRLY FK+ +PL + +HRQS Y+ GR +++DI H SCS
Sbjct: 180 TLLFNEPPEARKPSE-RWRLYVFKDGEPLNEPLCLHRQSCYLFGRERRIADIPTDHPSCS 238
Query: 162 NQHAVLQYRELSLNN-----TRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEF 216
QHAV+QYRE+ + V+PY+MDL S N T++N I P Y ELFE D I+F
Sbjct: 239 KQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTNKTYINESPIEPQRYYELFEKDTIKF 298
Query: 217 GLSTREYVLLHQNS 230
G S+REYVLLH+NS
Sbjct: 299 GNSSREYVLLHENS 312
>sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133
OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1
Length = 1505
Score = 121 bits (303), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
Query: 106 YYEPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHA 165
++EP +AKLP++ KW LYPFK L +Y+HR+ +++ GRN ++DI I H SCS+QHA
Sbjct: 1364 WHEPAEAKLPTE-KWMLYPFKGKDQLDTIYLHRKKSFLFGRNRDIADIPIDHPSCSSQHA 1422
Query: 166 VLQYRELSLNNTR------VVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGLS 219
V+ +R N + PY++DL+S NGTF+ G KI P Y EL D I FG S
Sbjct: 1423 VIVFRIRKKENPNTGSIKTFILPYIIDLESTNGTFLKGEKIEPAKYFELRPKDKITFGTS 1482
Query: 220 TREYVLL 226
TREY+LL
Sbjct: 1483 TREYILL 1489
>sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1
Length = 796
Score = 57.8 bits (138), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 106 YYEPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHA 165
Y EP P+ + L K L + S + GR + D+ + H S S HA
Sbjct: 154 YQEPPWGG-PATAPYSLETLKGGTILGTRSLKGTSYCLFGRLSGC-DVCLEHPSVSRYHA 211
Query: 166 VLQYR------ELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGLS 219
VLQ+R E N YL DL S +GTF+N +I P TY + G V+ FG S
Sbjct: 212 VLQHRASGPDGECDSNGPGF---YLYDLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGS 268
Query: 220 TREYVL 225
TR ++L
Sbjct: 269 TRLFIL 274
>sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens
GN=PPP1R8 PE=1 SV=2
Length = 351
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 134 MYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGT 193
+ I + Y+ GRN + D I H SCS HA L Y + + R +L+DL S +GT
Sbjct: 41 LIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHK------HLKRVFLIDLNSTHGT 94
Query: 194 FVNGMKIAPLTYVELFEGDVIEFGLSTREYVL 225
F+ +++ P ++ + FG STR Y L
Sbjct: 95 FLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8
PE=1 SV=1
Length = 351
Score = 57.4 bits (137), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 134 MYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGT 193
+ I + Y+ GRN + D I H SCS HA L Y + + R +L+DL S +GT
Sbjct: 41 LIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHK------HLKRVFLIDLNSTHGT 94
Query: 194 FVNGMKIAPLTYVELFEGDVIEFGLSTREYVL 225
F+ +++ P ++ + FG STR Y L
Sbjct: 95 FLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus
GN=Ppp1r8 PE=1 SV=1
Length = 351
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 134 MYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGT 193
+ I + Y+ GRN + D I H SCS HA L Y + + R +L+DL S +GT
Sbjct: 41 LIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVYHK------HLKRVFLIDLNSTHGT 94
Query: 194 FVNGMKIAPLTYVELFEGDVIEFGLSTREYVL 225
F+ +++ P ++ + FG STR Y L
Sbjct: 95 FLGHIRLEPHKPQQIPIDSTVSFGASTRAYTL 126
>sp|Q9Y4F5|C170B_HUMAN Centrosomal protein of 170 kDa protein B OS=Homo sapiens GN=CEP170B
PE=1 SV=4
Length = 1589
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 152 DILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
+++++ S QHAV+ Y + + ++ DL S+NGTFVN M+I YV L
Sbjct: 31 ELMLQSRSVDKQHAVINYDQDRDEH------WVKDLGSLNGTFVNDMRIPDQKYVTLKLN 84
Query: 212 DVIEFGLSTREYVL 225
DVI FG + YVL
Sbjct: 85 DVIRFGYDSNMYVL 98
>sp|Q07930|PML1_YEAST Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PML1 PE=1 SV=1
Length = 204
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 48/199 (24%)
Query: 42 TSRKRKHSDKTTRT------PDDSP--VTECHDSSPVKIRREHASTFVASEDIAVKRKLD 93
+R H DK ++ PD SP + E ++ I +H + I+ +D
Sbjct: 10 NTRNYGHDDKKFKSQYIDIMPDFSPSGLLELESNNKEGIALKHVE---PQDAISPDNYMD 66
Query: 94 IL----KRSTLRPIVIYYEPKDAKLPSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAK 149
+L + T+ +VIY + K P W+ Y ++ +S Y++GR
Sbjct: 67 MLGLEARDRTMYELVIYRKNDKDKGP----WKRYD-----------LNGRSCYLVGRELG 111
Query: 150 --------------VSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFV 195
V+DI I + S QH V+Q+R N +++ Y+MDL S NGT +
Sbjct: 112 HSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFR----NVRGILKCYVMDLDSSNGTCL 167
Query: 196 NGMKIAPLTYVELFEGDVI 214
N + I Y+EL GDV+
Sbjct: 168 NNVVIPGARYIELRSGDVL 186
>sp|Q80U49|C170B_MOUSE Centrosomal protein of 170 kDa protein B OS=Mus musculus GN=Cep170b
PE=1 SV=2
Length = 1574
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 143 IIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAP 202
+GR+ +++++ S QHAV+ Y + + ++ DL S+NGTFVN ++I
Sbjct: 24 FVGRDE--CELMLQSRSVDKQHAVINYDQDRDEH------WVKDLGSLNGTFVNDVRIPD 75
Query: 203 LTYVELFEGDVIEFGLSTREYVL 225
Y+ L DVI FG + YVL
Sbjct: 76 QKYITLKLNDVIRFGYDSNMYVL 98
>sp|Q498L0|C170B_XENLA Centrosomal protein of 170 kDa protein B OS=Xenopus laevis
GN=cep170b PE=2 SV=1
Length = 1610
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 152 DILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
++++R S QHAV+ Y + + RV DL S+NGTF+N ++I Y+ L
Sbjct: 31 ELMLRSRSVDKQHAVINY-DSDKDEHRV-----KDLGSLNGTFINDVRIPDQKYITLKLN 84
Query: 212 DVIEFGLSTREYVL 225
D I FG YVL
Sbjct: 85 DNIRFGYDINTYVL 98
>sp|A6PWD2|FHAD1_MOUSE Forkhead-associated domain-containing protein 1 OS=Mus musculus
GN=Fhad1 PE=2 SV=1
Length = 1420
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 144 IGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPL 203
IG++A SD++++ N HA++++ E T V L D S NGTFVN I +
Sbjct: 20 IGKHAD-SDLVLQSADIDNHHALIEFNEAE--GTFV----LQDFNSRNGTFVNECHIQNV 72
Query: 204 TYVELFEGDVIEFGLSTREYVLLHQN 229
V+L GD++ FG + Y L+ +N
Sbjct: 73 A-VKLIPGDILRFGSAGMTYELVIEN 97
>sp|A0JM08|C170B_XENTR Centrosomal protein of 170 kDa protein B OS=Xenopus tropicalis
GN=cep170b PE=2 SV=1
Length = 1628
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
Query: 152 DILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEG 211
+++++ S QHAV+ Y + + RV DL S+NGTFVN ++I Y+ L
Sbjct: 31 ELMLQSRSVDKQHAVINY-DSDKDEHRV-----KDLGSLNGTFVNDVRIPDQKYITLKLS 84
Query: 212 DVIEFGLSTREYVL 225
D I FG YVL
Sbjct: 85 DNIRFGYDINTYVL 98
>sp|P34648|YOT2_CAEEL Uncharacterized protein ZK632.2 OS=Caenorhabditis elegans
GN=ZK632.2 PE=4 SV=1
Length = 710
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 143 IIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAP 202
+IGR D+L+ H S S H +LQY ++ T ++ +L S +G+ +N ++ P
Sbjct: 109 VIGRIKPGCDLLMEHPSISRYHCILQYGNDKMSKTGKGW-HIFELGSTHGSRMNKKRLPP 167
Query: 203 LTYVELFEGDVIEFGLSTR--EYVLLHQNSE 231
Y+ G + +FG STR +V ++SE
Sbjct: 168 KQYIRTRVGFIFQFGESTRILNFVGPEEDSE 198
>sp|Q5SW79|CE170_HUMAN Centrosomal protein of 170 kDa OS=Homo sapiens GN=CEP170 PE=1 SV=1
Length = 1584
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 143 IIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAP 202
+GR+ +++++ S QHAV+ Y + + DL S+NGTFVN ++I
Sbjct: 24 FVGRDD--CELMLQSRSVDKQHAVINY------DASTDEHLVKDLGSLNGTFVNDVRIPE 75
Query: 203 LTYVELFEGDVIEFGLSTREYVLLH 227
TY+ L D + FG T + ++
Sbjct: 76 QTYITLKLEDKLRFGYDTNLFTVVQ 100
>sp|Q6A065|CE170_MOUSE Centrosomal protein of 170 kDa OS=Mus musculus GN=Cep170 PE=1 SV=2
Length = 1588
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 143 IIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAP 202
+GR+ +++++ S QHAV+ Y + + + DL S+NGTFVN ++I
Sbjct: 24 FVGRDD--CELMLQSRSVDKQHAVINY------DASMDEHLVKDLGSLNGTFVNDVRIPE 75
Query: 203 LTYVELFEGDVIEFGLSTREYVLL 226
TY+ L D + FG T + ++
Sbjct: 76 QTYITLKLEDKLRFGYDTNLFTVV 99
>sp|B1AJZ9|FHAD1_HUMAN Forkhead-associated domain-containing protein 1 OS=Homo sapiens
GN=FHAD1 PE=2 SV=2
Length = 1412
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 144 IGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPL 203
IGR+ SD++++ N HA+++Y E + L D S NGTFVN I +
Sbjct: 20 IGRHEN-SDLVLQSPDIDNHHALIEYNEAECSFV------LQDFNSRNGTFVNECHIQNV 72
Query: 204 TYVELFEGDVIEFGLSTREYVLLHQN 229
V+L GD++ FG + Y L+ +N
Sbjct: 73 A-VKLIPGDILRFGSAGLTYELVIEN 97
>sp|Q3URD3|SLMAP_MOUSE Sarcolemmal membrane-associated protein OS=Mus musculus GN=Slmap
PE=1 SV=2
Length = 845
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 127 NHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNT------RVV 180
N P +++ IGR+ + C + +A + LS N+ +
Sbjct: 13 NSHPFQERHVYLDEPIKIGRS-------VARCRPAQNNATFDCKVLSRNHALVWFDHKTS 65
Query: 181 RPYLMDLKSMNGTFVNGMKIAPLTY----VELFEGDVIEFGLSTRE 222
+ YL D KS NGTF+N +++ + E+ GD+I+FG+ E
Sbjct: 66 KFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>sp|Q03944|VPS64_YEAST Vacuolar protein sorting-associated protein 64 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS64 PE=1
SV=1
Length = 604
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 183 YLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFG 217
Y+ DLKS NGTFVNG+KI VEL GD ++ G
Sbjct: 240 YIRDLKSSNGTFVNGVKIRQ-NDVELKVGDTVDLG 273
>sp|Q06001|FAR10_YEAST Factor arrest protein 10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=FAR10 PE=1 SV=1
Length = 478
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 183 YLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFG 217
Y+ DLKS NGTF+NG +I VE+ GDVI+ G
Sbjct: 159 YIRDLKSSNGTFINGQRIGS-NDVEIKVGDVIDLG 192
>sp|Q14BN4|SLMAP_HUMAN Sarcolemmal membrane-associated protein OS=Homo sapiens GN=SLMAP
PE=1 SV=1
Length = 828
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 127 NHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVV------ 180
N P +++ IGR+ + C + +A + LS N+ V
Sbjct: 13 NSHPFQERHVYLDEPIKIGRS-------VARCRPAQNNATFDCKVLSRNHALVWFDHKTG 65
Query: 181 RPYLMDLKSMNGTFVNGMKIAPLTY----VELFEGDVIEFGLSTRE 222
+ YL D KS NGTF+N +++ + E+ GD+I+FG+ E
Sbjct: 66 KFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>sp|Q28623|SLMAP_RABIT Sarcolemmal membrane-associated protein OS=Oryctolagus cuniculus
GN=SLMAP PE=1 SV=2
Length = 771
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 127 NHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVV------ 180
N P +++ IGR+ + C + +A + LS N+ V
Sbjct: 13 NSHPFQERHVYLDEPIKIGRS-------VARCRPAQNNATFDCKVLSRNHALVWFDHKTG 65
Query: 181 RPYLMDLKSMNGTFVNGMKIAPLTY----VELFEGDVIEFGLSTRE 222
+ YL D KS NGTF+N +++ + E+ GD+I+FG+ E
Sbjct: 66 KFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>sp|O74388|YNVD_SCHPO Uncharacterized protein C3H7.13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC3H7.13 PE=1 SV=1
Length = 301
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 134 MYIHRQSAYIIGRNAKVS------DILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDL 187
+ I + Y IGR+ S ++ S QHA L + +L+ Y+ D+
Sbjct: 19 LVISPSTIYKIGRHTNKSTSPSPSNLFFNSKVLSRQHAELWLDKDTLS------VYIRDV 72
Query: 188 KSMNGTFVNGMKIAPLTY----VELFEGDVIEFGLST-REYVLLHQ 228
KS NGTFVN +++P +L GD+++FG+ E ++HQ
Sbjct: 73 KSSNGTFVNETRLSPENKPSAPCKLNSGDIVDFGVDIYNEDEIVHQ 118
>sp|O23305|Y4449_ARATH FHA domain-containing protein At4g14490 OS=Arabidopsis thaliana
GN=At4g14490 PE=1 SV=1
Length = 386
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Query: 144 IGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPL 203
+GR + ++I I+ S +H L+ S N + DL S NGT +N + P
Sbjct: 30 VGRIVRGNEIAIKDAGISTKH--LRIESDSGN------WVIQDLGSSNGTLLNSNALDPE 81
Query: 204 TYVELFEGDVIEFG 217
T V L +GDVI+ G
Sbjct: 82 TSVNLGDGDVIKLG 95
>sp|Q9R207|NBN_MOUSE Nibrin OS=Mus musculus GN=Nbn PE=1 SV=1
Length = 751
Score = 37.7 bits (86), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Query: 120 WRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIRH-CSCSNQHAVL--QYRELSLNN 176
W+L P P + Y++GR K ILI + S S HAVL + SL+
Sbjct: 2 WKLLPAAGAAPGEPYRLLAGVEYVVGR--KNCGILIENDQSISRNHAVLTVNFPVTSLSQ 59
Query: 177 TRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGL 218
T + + S GTFVN K+ L GD + FG+
Sbjct: 60 TDEIPTLTIKDNSKYGTFVNEEKMQTGLSCTLKTGDRVTFGV 101
>sp|P46014|P2C70_ARATH Protein phosphatase 2C 70 OS=Arabidopsis thaliana GN=KAPP PE=1 SV=2
Length = 581
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 151 SDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPLTY----- 205
SD+ ++ S +HA +++ N+T+ + L+D+ S+NGT VN I+
Sbjct: 216 SDLALKDSEVSGKHA-----QITWNSTKF-KWELVDMGSLNGTLVNSHSISHPDLGSRKW 269
Query: 206 ---VELFEGDVIEFGLSTREYVLLHQNSE 231
VEL D+I G +T+ YV + +E
Sbjct: 270 GNPVELASDDIITLGTTTKVYVRISSQNE 298
>sp|Q5I2W8|NBN_DANRE Nibrin OS=Danio rerio GN=nbn PE=2 SV=2
Length = 818
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 120 WRLYPFKNHQPLPIMYIHRQSAYIIGR-NAKVSDILIRHCSCSNQHAVLQYRELSLNNTR 178
W+L P ++ I+ ++ Y++GR N ++ +L S S HAVL E ++
Sbjct: 2 WKLQPTESGGESVILLAGQE--YVVGRKNCEI--LLTNDQSISRVHAVLTVTEQAVT--- 54
Query: 179 VVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGLSTREYVLLHQNSECL 233
L D S GTFVNG K+ + L G I FG+ ++ L EC+
Sbjct: 55 -----LKD-SSKYGTFVNGEKLESGSTKTLQTGYKITFGVFQSKFSL---EKECI 100
>sp|P39009|DUN1_YEAST DNA damage response protein kinase DUN1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DUN1 PE=1 SV=1
Length = 513
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 136 IHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFV 195
I ++ IGR ++ D+++ S HA ++ ++N + ++D KS NGTF+
Sbjct: 50 ITNRNVTTIGR-SRSCDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVID-KSRNGTFI 107
Query: 196 NGMKIAPLTYVELFEGDVIEFGLS 219
NG ++ Y+ L GD I FG S
Sbjct: 108 NGNRLVKKDYI-LKNGDRIVFGKS 130
>sp|P0C219|SLMAP_RAT Sarcolemmal membrane-associated protein OS=Rattus norvegicus
GN=Slmap PE=2 SV=1
Length = 858
Score = 36.6 bits (83), Expect = 0.14, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 127 NHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNT------RVV 180
N P +++ IGR+ + C + +A + LS N+ +
Sbjct: 13 NSHPFQERHVYLDEPIKIGRS-------VARCRPAQNNATFDCKVLSRNHALVWFDHKTS 65
Query: 181 RPYLMDLKSMNGTFVNGMKIAPLTY----VELFEGDVIEFGLSTRE 222
+ YL D KS NGTF+N +++ + E+ GD+I+FG+ E
Sbjct: 66 KFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTE 111
>sp|Q9JIL9|NBN_RAT Nibrin OS=Rattus norvegicus GN=Nbn PE=1 SV=2
Length = 750
Score = 36.6 bits (83), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 5/102 (4%)
Query: 120 WRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIRH-CSCSNQHAVLQ--YRELSLNN 176
W+L P + P + YI+GR K ILI + S S HAVL+ + SL+
Sbjct: 2 WKLLPAASAAPGEPCRLLAGVEYIVGR--KNCAILIENDQSISRNHAVLRVNFPVTSLSQ 59
Query: 177 TRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGL 218
T + + S GTF+N K+ L GD + FG+
Sbjct: 60 TDEIPTLTIKDNSKYGTFINEEKMQNGLSSTLKTGDRVTFGV 101
>sp|Q5R4I2|RNF8_PONAB E3 ubiquitin-protein ligase RNF8 OS=Pongo abelii GN=RNF8 PE=2 SV=1
Length = 486
Score = 36.2 bits (82), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 184 LMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGL 218
+MD KS+NG ++N ++ PL+ + +GD I+ G+
Sbjct: 76 IMDNKSLNGVWLNRARLEPLSVYSIHQGDYIQLGV 110
>sp|Q9DE07|NBN_CHICK Nibrin OS=Gallus gallus GN=NBN PE=1 SV=1
Length = 753
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 14/122 (11%)
Query: 120 WRLYPFKN-HQPLPIMYIHRQSAYIIGRNAKVSDILIRH-CSCSNQHAVLQYRELSLNNT 177
W+L P +P ++ + Y++GR K LI+ S S HAVL ++
Sbjct: 2 WKLVPAAGPGEPFRLLV---GTEYVVGR--KNCAFLIQDDQSISRSHAVLTVSRPETTHS 56
Query: 178 RVVRPYLMDLKSMN--GTFVNGMKIAPLTYVELFEGDVIEFGLSTREYVLLHQN----SE 231
+ V ++ +K + GTFVNG K++ + L GD + FG+ ++ + +++ S
Sbjct: 57 QSVSVPVLTIKDTSKYGTFVNGSKLSGASR-SLQSGDRVNFGVFESKFRVEYESLVVCSS 115
Query: 232 CL 233
CL
Sbjct: 116 CL 117
>sp|O76064|RNF8_HUMAN E3 ubiquitin-protein ligase RNF8 OS=Homo sapiens GN=RNF8 PE=1 SV=1
Length = 485
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 184 LMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGL 218
+MD KS+NG ++N ++ PL + +GD I+ G+
Sbjct: 76 IMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGV 110
>sp|Q8VC56|RNF8_MOUSE E3 ubiquitin-protein ligase RNF8 OS=Mus musculus GN=Rnf8 PE=1 SV=1
Length = 488
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 184 LMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFG--LSTRE 222
+MD KS+NG ++N ++APL + +GD I+ G L +RE
Sbjct: 76 IMDNKSLNGVWLNRERLAPLQGYCIRKGDHIQLGVPLESRE 116
>sp|Q4KLN8|RNF8_RAT E3 ubiquitin-protein ligase RNF8 OS=Rattus norvegicus GN=Rnf8 PE=2
SV=1
Length = 487
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 184 LMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFG--LSTREYV 224
+MD KS+NG ++N ++APL + +GD I+ G L ++E+
Sbjct: 76 IMDNKSLNGVWLNRERLAPLQGYCIRKGDHIQLGVPLESKEHA 118
>sp|A6ZRW7|DMA2_YEAS7 E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae
(strain YJM789) GN=DMA2 PE=3 SV=1
Length = 522
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 183 YLMDLKSMNGTFVNGMKIAPLTYVE----LFEGDVIEFGLSTR 221
Y+ D+KS +GTF+N +++P + + L +GD+++ G+ R
Sbjct: 341 YIKDVKSSSGTFLNHQRLSPASSLSKDTPLRDGDILQLGMDFR 383
>sp|P53924|DMA2_YEAST E3 ubiquitin-protein ligase DMA2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DMA2 PE=1 SV=1
Length = 522
Score = 34.3 bits (77), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
Query: 183 YLMDLKSMNGTFVNGMKIAPLTYVE----LFEGDVIEFGLSTR 221
Y+ D+KS +GTF+N +++P + + L +GD+++ G+ R
Sbjct: 341 YIKDVKSSSGTFLNHQRLSPASSLSKDTPLRDGDILQLGMDFR 383
>sp|Q803C1|RNF8_DANRE E3 ubiquitin-protein ligase RNF8 OS=Danio rerio GN=rnf8 PE=2 SV=1
Length = 485
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 134 MYIHRQSAYIIGRNAKVS-DILIRHC--SCSNQHAVLQYRELSLNNTRVVRPYLMDLKSM 190
+ + S +GR V+ IL C S H V + LN R + + D KS+
Sbjct: 35 LRLFEDSEVSVGRGLNVTHQILSSSCPLMISRIHCVFK-----LNEGR--QWTVTDNKSL 87
Query: 191 NGTFVNGMKIAPLTYVELFEGDVIEFGLSTR------EYVLLHQN 229
NG +VNG +I P T L + D + G+ +Y+L+ +N
Sbjct: 88 NGVWVNGKRIPPSTPCILHQSDSVRLGVPLDGNPVEFDYILVQKN 132
>sp|Q54BF0|FHKA_DICDI Probable serine/threonine-protein kinase fhkA OS=Dictyostelium
discoideum GN=fhkA PE=3 SV=1
Length = 593
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 144 IGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSMNGTFVNGMKIAPL 203
IGR +K +I++ S +H ++ + N ++ +S NGTF+NG I
Sbjct: 56 IGR-SKTCNIVVPELIVSGKHCIITRADAIENGNTNYGLLMIQDQSTNGTFINGKLIGKG 114
Query: 204 TYVELFEGDVIEFGLSTRE 222
L GD + G ST+E
Sbjct: 115 KSRLLKNGDKLCLGKSTKE 133
>sp|Q10322|DMA1_SCHPO Probable E3 ubiquitin-protein ligase dma1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dma1 PE=1 SV=1
Length = 267
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 131 LPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRPYLMDLKSM 190
LPI YI R + G VS I+ R S +HA + Y NNT Y+ D+ S
Sbjct: 58 LPI-YIGRYTERYNG--GDVSAIVFRSKVVSRRHAQIFYE----NNTW----YIQDMGSS 106
Query: 191 NGTFVNGMKIAPLTYVE----LFEGDVIEFGLSTR 221
+GTF+N ++++P + + D+++ G R
Sbjct: 107 SGTFLNHVRLSPPSKTSKPYPISNNDILQLGADYR 141
>sp|P38823|DMA1_YEAST E3 ubiquitin-protein ligase DMA1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DMA1 PE=1 SV=1
Length = 416
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 183 YLMDLKSMNGTFVNGMKIAPLTYVE----LFEGDVIEFGLSTR 221
+L D+KS +GTF+N +++ + L +GD+I+ G+ R
Sbjct: 235 FLKDVKSSSGTFLNHQRLSSASTTSKDYLLHDGDIIQLGMDFR 277
>sp|P24719|MEK1_YEAST Meiosis-specific serine/threonine-protein kinase MEK1
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=MEK1 PE=3 SV=1
Length = 497
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 115 PSQYKWRLYPFKNHQPLPIMYIHRQSAYIIGRNAKVSDILIRHCSCSNQHAVLQYRELSL 174
P+ + + + Q +PI+ + +GRN K +++ + S S+ H V + +
Sbjct: 23 PAHLEVNVGGYNTEQTIPIV---KHQLVKVGRNDKECQLVLTNPSISSVHCV--FWCVFF 77
Query: 175 NNTRVVRPYLMDLKSMNGTFVNGMKIAPLTYVELFEGDVIEFGLSTRE 222
+ + Y+ D S+NGT++NG+ + L DVIE + E
Sbjct: 78 DEDSIPMFYVKDC-SLNGTYLNGLLLKRDKTYLLKHCDVIELSQGSEE 124
>sp|O65934|ABC1_MYCTU ABC transporter ATP-binding/permease protein Rv1747
OS=Mycobacterium tuberculosis GN=Rv1747 PE=1 SV=1
Length = 865
Score = 30.8 bits (68), Expect = 8.0, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 20/78 (25%)
Query: 144 IGRNAKVSDILIRHCSCSNQHAVLQYRELSLNNTRVVRP---YLMDLKSMNGTFVNGMKI 200
IGR A +DI+I S HA L V P + D +S+NGTFVNG ++
Sbjct: 232 IGR-ANDNDIVIPEVLASRHHATL-----------VPTPGGTEIRDNRSINGTFVNGARV 279
Query: 201 -APLTYVELFEGDVIEFG 217
A L L +GDV+ G
Sbjct: 280 DAAL----LHDGDVVTIG 293
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,807,947
Number of Sequences: 539616
Number of extensions: 3555589
Number of successful extensions: 7914
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 7854
Number of HSP's gapped (non-prelim): 63
length of query: 238
length of database: 191,569,459
effective HSP length: 114
effective length of query: 124
effective length of database: 130,053,235
effective search space: 16126601140
effective search space used: 16126601140
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)