RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13349
(604 letters)
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 304 bits (780), Expect = e-101
Identities = 123/259 (47%), Positives = 174/259 (67%), Gaps = 6/259 (2%)
Query: 344 IVDNYNAKRLVVTNGKIFFKNVSFSY-DQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTI 402
I + A+ + + G+I +VSF Y D + I+ +++L+I+ GE + VG SG GKST+
Sbjct: 1 IKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTL 60
Query: 403 NNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYGRPDAS 462
NL+ RFYD+ G+ILIDG NI + SLR QIG+V QD L ++++NIL GRP A+
Sbjct: 61 INLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTAT 120
Query: 463 ECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPI 522
+ E+ AAK A A FI +L GYD VGE G+KLSGGQ+QR++IAR+ L N PI
Sbjct: 121 DEEVVEAAKMANAHDFIMNLPQ-----GYDTEVGERGVKLSGGQKQRLSIARIFLNNPPI 175
Query: 523 LLLDEATSALDSEAEIAIQKSLYNLMKGKTVIAIAHRLSTISAMDRLIVLDNGCVAEEGS 582
L+LDEATSALD E+E IQ++L L K +T + +AHRLSTI+ D+++V++NG + E G+
Sbjct: 176 LILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 235
Query: 583 HLDLLKKNGLYSRLWRHQN 601
H +L+ K G Y L+ QN
Sbjct: 236 HRELIAKQGAYEHLYSIQN 254
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 279 bits (716), Expect = 4e-91
Identities = 110/256 (42%), Positives = 172/256 (67%), Gaps = 7/256 (2%)
Query: 347 NYNAKRLVVTNGKIFFKNVSFSYD-QKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNL 405
+ + + G + F+NV+F+Y ++ + N++L I G+ + LVGRSG+GKSTI +L
Sbjct: 1 DEGKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASL 60
Query: 406 LLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYGRPDA-SEC 464
+ RFYDI G IL+DG ++ + SLR Q+ +V+Q+ L + ++ +NI Y R + S
Sbjct: 61 ITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSRE 120
Query: 465 ELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILL 524
++ AA+ A A FI + + G D +GE+G+ LSGGQRQRIAIAR +L+++PIL+
Sbjct: 121 QIEEAARMAYAMDFINKMDN-----GLDTIIGENGVLLSGGQRQRIAIARALLRDSPILI 175
Query: 525 LDEATSALDSEAEIAIQKSLYNLMKGKTVIAIAHRLSTISAMDRLIVLDNGCVAEEGSHL 584
LDEATSALD+E+E AIQ +L L K +T + IAHRLSTI D ++V+++G + E G+H
Sbjct: 176 LDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHS 235
Query: 585 DLLKKNGLYSRLWRHQ 600
+LL ++G+Y++L + Q
Sbjct: 236 ELLAQHGVYAQLHKMQ 251
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 261 bits (667), Expect = 4e-84
Identities = 117/244 (47%), Positives = 164/244 (67%), Gaps = 7/244 (2%)
Query: 360 IFFKNVSFSYD-QKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEIL 418
I F+N+ F Y +I++N++L+I+ GE IG+VGRSG+GKST+ L+ RFY + G++L
Sbjct: 2 ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVL 61
Query: 419 IDGQNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYGRPDASECELFNAAKCAEADIF 478
IDG +++ LR Q+G+V QD LL+RSI DNI P S ++ AAK A A F
Sbjct: 62 IDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANPGMSVEKVIYAAKLAGAHDF 121
Query: 479 IKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEI 538
I L R+GY+ VGE G LSGGQRQRIAIAR ++ N IL+ DEATSALD E+E
Sbjct: 122 ISEL-----REGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEH 176
Query: 539 AIQKSLYNLMKGKTVIAIAHRLSTISAMDRLIVLDNGCVAEEGSHLDLLKK-NGLYSRLW 597
I ++++ + KG+TVI IAHRLST+ DR+IV++ G + E+G H +LL + LYS L+
Sbjct: 177 VIMRNMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLY 236
Query: 598 RHQN 601
+ Q+
Sbjct: 237 QLQS 240
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 260 bits (666), Expect = 6e-84
Identities = 105/240 (43%), Positives = 152/240 (63%), Gaps = 6/240 (2%)
Query: 362 FKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDG 421
++V F+YD I+ ++S QP I G SG GKSTI +LL RFY GEI IDG
Sbjct: 4 ARHVDFAYDDSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDG 63
Query: 422 QNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYG-RPDASECELFNAAKCAEADIFIK 480
Q I N+S E+ R QIG V+QD++++ +IR+N+ YG D ++ +L+ A A F+
Sbjct: 64 QPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFV- 122
Query: 481 SLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAI 540
E+ + VGE G+K+SGGQRQR+AIAR L+N IL+LDEAT++LDSE+E +
Sbjct: 123 ----ENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMV 178
Query: 541 QKSLYNLMKGKTVIAIAHRLSTISAMDRLIVLDNGCVAEEGSHLDLLKKNGLYSRLWRHQ 600
QK+L +LMKG+T + IAHRLSTI D++ ++ G + G H +L+ + LY++ Q
Sbjct: 179 QKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLYAKYVSEQ 238
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 259 bits (662), Expect = 3e-83
Identities = 85/247 (34%), Positives = 142/247 (57%), Gaps = 10/247 (4%)
Query: 357 NGKIFFKNVSFSYDQK--HLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKY 414
G + F++VSF+Y + L++ L+ T++PGE LVG +G+GKST+ LL Y
Sbjct: 9 EGLVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTG 68
Query: 415 GEILIDGQNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYG-RPDASECELFNAAKCA 473
G++L+DG+ + L Q+ V Q+ + RS+++NI YG + E+ AA +
Sbjct: 69 GQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKS 128
Query: 474 EADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALD 533
A FI L GYD V E G +LSGGQRQ +A+AR +++ +L+LD+ATSALD
Sbjct: 129 GAHSFISGLPQ-----GYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALD 183
Query: 534 SEAEIAIQKSLYNLMK--GKTVIAIAHRLSTISAMDRLIVLDNGCVAEEGSHLDLLKKNG 591
+ +++ +++ LY + ++V+ I LS + D ++ L+ G + E G+H L++K G
Sbjct: 184 ANSQLQVEQLLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTHQQLMEKKG 243
Query: 592 LYSRLWR 598
Y + +
Sbjct: 244 CYWAMVQ 250
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 226 bits (578), Expect = 2e-70
Identities = 56/260 (21%), Positives = 115/260 (44%), Gaps = 23/260 (8%)
Query: 343 KIVDNYNAKRLVVTNGKIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTI 402
K+ + ++ + F ++ + ++ N++L I+ GE + + G +G+GK+++
Sbjct: 22 KVQQSNGDRKHSSDENNVSFSHLCLVGNP---VLKNINLNIEKGEMLAITGSTGSGKTSL 78
Query: 403 NNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLHRSIRDNILYGRPDAS 462
L+L + G I G ++ +Q + ++ +I++NI++G
Sbjct: 79 LMLILGELEASEGIIKHSG-------------RVSFCSQFSWIMPGTIKENIIFG-VSYD 124
Query: 463 ECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPI 522
E + K + I + + +GE G+ LSGGQR RI++AR + K+A +
Sbjct: 125 EYRYKSVVKACQLQQDITKFAE-----QDNTVLGEGGVTLSGGQRARISLARAVYKDADL 179
Query: 523 LLLDEATSALDSEAEIAI-QKSLYNLMKGKTVIAIAHRLSTISAMDRLIVLDNGCVAEEG 581
LLD LD E + + + LM KT I + ++ + D++++L G G
Sbjct: 180 YLLDSPFGYLDVFTEEQVFESCVCKLMANKTRILVTSKMEHLRKADKILILHQGSSYFYG 239
Query: 582 SHLDLLKKNGLYSRLWRHQN 601
+ +L +S +
Sbjct: 240 TFSELQSLRPDFSSKLMGYD 259
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 163 bits (414), Expect = 3e-47
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 16/232 (6%)
Query: 360 IFFKNVSFSYDQKHLII---NNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
I KNV+ +Y II N++L I+ GE + ++G SG+GKST+ N++ GE
Sbjct: 2 IKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGE 61
Query: 417 ILIDGQNISNVSQESL----REQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAK 471
+ ID +++ + L R++IG V Q +L+ + +N+ + +
Sbjct: 62 VYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGAMSGEER 121
Query: 472 CAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSA 531
A +K E + + +LSGGQ+QR+AIAR + N PI+L D+ T A
Sbjct: 122 RKRALECLKMAELEERFANHKPN------QLSGGQQQRVAIARALANNPPIILADQPTGA 175
Query: 532 LDSEAEIAIQKSLYNLMK--GKTVIAIAHRLSTISAMDRLIVLDNGCVAEEG 581
LDS+ I + L L + GKTV+ + H ++ +R+I L +G V E
Sbjct: 176 LDSKTGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREE 227
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 152 bits (385), Expect = 4e-43
Identities = 60/242 (24%), Positives = 99/242 (40%), Gaps = 31/242 (12%)
Query: 362 FKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDG 421
++V+ S + LS ++ GE + LVG +GAGKST+ + K G I G
Sbjct: 6 LQDVAEST-----RLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGK-GSIQFAG 59
Query: 422 QNISNVSQESLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADIFIK 480
Q + S L ++Q + + + + D + EL N A
Sbjct: 60 QPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAGA------- 112
Query: 481 SLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAP-------ILLLDEATSALD 533
D +G +LSGG+ QR+ +A V+L+ P +LLLDE ++LD
Sbjct: 113 --------LALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLD 164
Query: 534 SEAEIAIQKSLYNLMK-GKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKKNG 591
+ A+ K L L + G ++ +H L+ R +L G + G ++L
Sbjct: 165 VAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPN 224
Query: 592 LY 593
L
Sbjct: 225 LA 226
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 147 bits (372), Expect = 4e-41
Identities = 58/236 (24%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 359 KIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEIL 418
++ +N++ + +N L+LTI+ GE + L+G SG GK+T ++ + G I
Sbjct: 6 EVKLENLTKRFGNFT-AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIY 64
Query: 419 IDGQNISNVSQESLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADI 477
++++ + + I MV Q ++ H ++ +NI + ++ K E D
Sbjct: 65 FGDRDVTYLPPK--DRNISMVFQSYAVWPHMTVYENIAFPL------KIKKFPK-DEIDK 115
Query: 478 FIKSLTDEHGRKGY-DAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEA 536
++ + + + + + LSGGQRQR+A+AR I+ +LL+DE S LD++
Sbjct: 116 RVRWAAELLQIEELLNRYPAQ----LSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKL 171
Query: 537 EIAIQKSLYNLMK--GKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
+A++ + L + T I + H M DR+ V++ G + + GS ++ +
Sbjct: 172 RVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLR 227
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 144 bits (365), Expect = 5e-40
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 29/249 (11%)
Query: 359 KIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEIL 418
K+ ++ Y ++ +SL + G+ I ++G SG+GKST + G I+
Sbjct: 2 KLHVIDLHKRYGGHE-VLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAII 60
Query: 419 IDGQNISNVSQES-------------LREQIGMVTQDTSLL-HRSIRDNILYGRPDASEC 464
++GQNI+ V + LR ++ MV Q +L H ++ +N++
Sbjct: 61 VNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAP-----I 115
Query: 465 ELFNAAKCAEADIFIKSLTDEHG--RKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPI 522
++ +K +A + G + + LSGGQ+QR++IAR + +
Sbjct: 116 QVLGLSK-HDARERALKYLAKVGIDERAQGKYPVH----LSGGQQQRVSIARALAMEPDV 170
Query: 523 LLLDEATSALDSEAEIAIQKSLY-NLMKGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEE 580
LL DE TSALD E + + + +GKT++ + H + + +I L G + EE
Sbjct: 171 LLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 230
Query: 581 GSHLDLLKK 589
G +
Sbjct: 231 GDPEQVFGN 239
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 142 bits (359), Expect = 2e-39
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 22/241 (9%)
Query: 360 IFFKNVSFSYDQKHL---IINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
I N++ + Q +NN+SL + G+ G++G SGAGKST+ + G
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 417 ILIDGQNISNVSQE---SLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKC 472
+L+DGQ ++ +S+ R QIGM+ Q +LL R++ N+ EL N K
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPL------ELDNTPK- 114
Query: 473 AEADIFIKSLTDEHGRKGY-DAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSA 531
E + L G D++ LSGGQ+QR+AIAR + N +LL DEATSA
Sbjct: 115 DEVKRRVTELLSLVGLGDKHDSYPSN----LSGGQKQRVAIARALASNPKVLLCDEATSA 170
Query: 532 LDSEAEIAIQKSLYNLMK--GKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLK 588
LD +I + L ++ + G T++ I H + + + D + V+ NG + E+ + ++
Sbjct: 171 LDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFS 230
Query: 589 K 589
Sbjct: 231 H 231
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 136 bits (344), Expect = 4e-37
Identities = 51/234 (21%), Positives = 100/234 (42%), Gaps = 8/234 (3%)
Query: 363 KNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQ 422
+N+ + + ++ +S+++ G+ ++G +G+GKST+ N++ F G + + +
Sbjct: 8 ENIVKYFGEFK-ALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENK 66
Query: 423 NISNVSQ-ESLREQIGMVTQD-TSLLHRSIRDNILYGRPDASEC---ELFNAAKCAEADI 477
+I+N E I Q L ++ +N+L G E LF + +
Sbjct: 67 DITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGESPLNSLFYKKWIPKEEE 126
Query: 478 FIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAE 537
++ +LSGGQ + + I R ++ N ++++DE + +
Sbjct: 127 MVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLA 186
Query: 538 IAIQKSLYNLM-KGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
I + L KG T + I HRL + D L V+ NG + EG + +K
Sbjct: 187 HDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKN 240
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 132 bits (334), Expect = 6e-36
Identities = 55/239 (23%), Positives = 102/239 (42%), Gaps = 19/239 (7%)
Query: 359 KIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEIL 418
+ +V + + + +SL ++ GE + L+G SG GK+T ++ + G+I
Sbjct: 3 GVRLVDVWKVFGEVT-AVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIY 61
Query: 419 IDGQNISNVSQESLRE----QIGMVTQDTSLLHRSIRDNILYGRPDASECELFNAAKCAE 474
I + +++ + I MV Q +L + + E
Sbjct: 62 IGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNIA------FPLKLRKVPRQE 115
Query: 475 ADIFIKSLTDEHGRKGY-DAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALD 533
D ++ + + G + E LSGGQRQR+A+ R I++ + L+DE S LD
Sbjct: 116 IDQRVREVAELLGLTELLNRKPRE----LSGGQRQRVALGRAIVRKPQVFLMDEPLSNLD 171
Query: 534 SEAEIAIQKSLYNL--MKGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
++ + ++ L L G T I + H M DR+ V++ G + + GS ++ K
Sbjct: 172 AKLRVRMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDK 230
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 130 bits (327), Expect = 2e-35
Identities = 46/219 (21%), Positives = 100/219 (45%), Gaps = 30/219 (13%)
Query: 359 KIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEIL 418
K+ +++S YD+ ++ +++TI+ G + G +G GK+T+ + + GEI+
Sbjct: 2 KLEIRDLSVGYDKP--VLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEII 59
Query: 419 IDGQNISNVSQESLREQIGMVTQDTSLLHR-SIRDNILYGR----PDASECELFNAAKCA 473
+G ++ +I + ++ + + S+ D + ++ E+ +A +
Sbjct: 60 YNGVP-----ITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESV 114
Query: 474 EADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALD 533
E + D + G LS G +R+ +A +L NA I +LD+ A+D
Sbjct: 115 E-------VLDLKKKLGE----------LSQGTIRRVQLASTLLVNAEIYVLDDPVVAID 157
Query: 534 SEAEIAIQKSLYNLMKGKTVIAIAHRLSTISAMDRLIVL 572
+++ + KS+ ++K K ++ I+ R +S D L
Sbjct: 158 EDSKHKVLKSILEILKEKGIVIISSR-EELSYCDVNENL 195
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 129 bits (326), Expect = 6e-35
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 17/234 (7%)
Query: 360 IFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILI 419
+ +NV+ ++ + + +++L I GE + VG SG GKST+ ++ I G++ I
Sbjct: 1 VQLQNVTKAWGEVV-VSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFI 59
Query: 420 DGQNISNVSQESLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADIF 478
+ +++ +GMV Q +L H S+ +N+ +G A + + +
Sbjct: 60 GEKRMNDTPPA--ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQV--- 114
Query: 479 IKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEI 538
+ L H D LSGGQRQR+AI R ++ + LLDE S LD+ +
Sbjct: 115 AEVLQLAHLL---DRKPKA----LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRV 167
Query: 539 AIQKSLYNL--MKGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
++ + L G+T+I + H + D+++VLD G VA+ G L+L
Sbjct: 168 QMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 221
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 125 bits (316), Expect = 2e-33
Identities = 52/235 (22%), Positives = 109/235 (46%), Gaps = 15/235 (6%)
Query: 358 GKIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEI 417
G + K++ +K I+ +S I+ GE GL+G +GAGK+T ++ G +
Sbjct: 1 GAVVVKDLRKRIGKKE-ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIV 59
Query: 418 LIDGQNISNVSQESLREQIGMVTQDTSL-LHRSIRDNILYGRPDASECELFNAAKCAEAD 476
+ G+N+ E +R+ I + ++ + + + + F A+ +E +
Sbjct: 60 TVFGKNVVEEPHE-VRKLISYLPEEAGAYRNMQGIEYLRFVAG-------FYASSSSEIE 111
Query: 477 IFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEA 536
++ T+ G + + S G +++ IAR ++ N + +LDE TS LD
Sbjct: 112 EMVERATE---IAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLN 168
Query: 537 EIAIQKSLYNLMK-GKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
++K L + G T++ +H + + + DR+ ++ NG + E G+ +L ++
Sbjct: 169 AREVRKILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER 223
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 122 bits (307), Expect = 3e-32
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 15/230 (6%)
Query: 363 KNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQ 422
+++ Y H I + L + G+ + L+G +GAGK+T + + + G+I+ +GQ
Sbjct: 10 QSLHVYYGAIH-AIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQ 68
Query: 423 NISNVS-QESLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADIFIK 480
+I+N R I +V + + ++ +N++ G + + E +F +
Sbjct: 69 DITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPR 128
Query: 481 SLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAI 540
L + + G LSGG++Q +AI R ++ +L++DE + L +
Sbjct: 129 -LKERLKQLGGT---------LSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEV 178
Query: 541 QKSLYNLMK-GKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLK 588
+ + + + G T++ + + VL+ G + EG +LL
Sbjct: 179 FEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLD 228
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 118 bits (297), Expect = 5e-31
Identities = 65/234 (27%), Positives = 116/234 (49%), Gaps = 21/234 (8%)
Query: 360 IFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILI 419
I +++S + L +NLSL ++ GE ++G +GAGK+ L+ F+ G IL+
Sbjct: 2 IEIESLSRKWKNFSL--DNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILL 59
Query: 420 DGQNISNVSQESLREQIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADIF 478
DG++++++S E + I V Q+ SL H +++ N+ +G + A
Sbjct: 60 DGKDVTDLSPE--KHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIKDPKRVLDTAR---- 113
Query: 479 IKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEI 538
+ + + + LSGG++QR+A+AR ++ N ILLLDE SALD +
Sbjct: 114 ---------DLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQE 164
Query: 539 AIQKSLYNL--MKGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
++ L L TV+ I H + M DR+ V+ +G + + G ++ +K
Sbjct: 165 NAREMLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEK 218
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 119 bits (298), Expect = 5e-31
Identities = 63/239 (26%), Positives = 119/239 (49%), Gaps = 18/239 (7%)
Query: 359 KIFFKNVSFSYDQ-KHLIINNLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEI 417
+I KNVS + + K + ++N+++ I+ GE+ G++G SGAGK+T ++ GE+
Sbjct: 3 RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGEL 62
Query: 418 LIDGQNISNVSQESLRE---QIGMVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCA 473
D + +++ + + +IGMV Q +L + + +NI + + + +
Sbjct: 63 YFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIAFPLTNMKMSKEEIRKRVE 122
Query: 474 EADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALD 533
E + D H + +LSG Q+QR+A+AR ++K+ +LLLDE S LD
Sbjct: 123 EV----AKILDIHHVLNHFPR------ELSGAQQQRVALARALVKDPSLLLLDEPFSNLD 172
Query: 534 SEAEIAIQKSLYNL--MKGKTVIAIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLLKK 589
+ + + + + G T++ ++H + I A+ DR+ VL G + + G DL
Sbjct: 173 ARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDN 231
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 113 bits (285), Expect = 3e-29
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 19/214 (8%)
Query: 378 NLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIG 437
N+ + + L+G +GAGKS L+ GE+ ++G +I+ + E R IG
Sbjct: 17 NVDFEM-GRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPE--RRGIG 73
Query: 438 MVTQDTSLL-HRSIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVG 496
V QD +L H S+ NI YG + E D ++ + ++ G +
Sbjct: 74 FVPQDYALFPHLSVYRNIAYGLRNVE---------RVERDRRVREMAEKL---GIAHLLD 121
Query: 497 EHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAIQKSLYNL--MKGKTVI 554
+LSGG+RQR+A+AR ++ +LLLDE SA+D + + + + L + ++
Sbjct: 122 RKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPIL 181
Query: 555 AIAHRLSTISAM-DRLIVLDNGCVAEEGSHLDLL 587
+ H L + + D + V+ NG + E+G +L
Sbjct: 182 HVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELF 215
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 82.0 bits (201), Expect = 9e-19
Identities = 21/211 (9%), Positives = 44/211 (20%), Gaps = 43/211 (20%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLH 447
KI + G G GK+T+ ++ + + + + I +
Sbjct: 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSS 61
Query: 448 RSIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQR 507
+ L G V +
Sbjct: 62 KFFTSKKLVGSY----------------------------------GVNVQYFEELAIPI 87
Query: 508 QRIAIARVILKNAPILLLDEATSALDSEAEIAIQKSLYNLMKGKTVIAIAHRLSTISAMD 567
A ++++DE + V+A +
Sbjct: 88 LERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVK 147
Query: 568 RLIVLDNGCVAEEGSH---------LDLLKK 589
+ L + E L LL++
Sbjct: 148 EIRRLPGAVLIELTPENRDVILEDILSLLER 178
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 58.6 bits (140), Expect = 5e-10
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Query: 491 YDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAIQKSLYNLMK- 549
G +++ G R+A++ + +L+LDE T LD E + + +K
Sbjct: 197 RPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKK 256
Query: 550 GKTVIAIAHRLSTISAMDRLIVLDNG 575
VI ++H A D +I +
Sbjct: 257 IPQVILVSHDEELKDAADHVIRISLE 282
Score = 33.2 bits (74), Expect = 0.081
Identities = 7/31 (22%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 378 NLSLTIQPGEKIGLVGRSGAGKSTINNLLLR 408
+ + + G ++G++G+GKS++ + +L
Sbjct: 16 DTVVEFKEGI-NLIIGQNGSGKSSLLDAILV 45
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 58.7 bits (140), Expect = 7e-10
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
Query: 489 KGYDAHVGEHGIKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAIQKSLYNLM 548
K G +++ G R+A++ + +L+LDE T LD E + + +
Sbjct: 272 KERPLTFLSGGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYL 331
Query: 549 K-GKTVIAIAHRLSTISAMDRLIVLD 573
K VI ++H A D +I +
Sbjct: 332 KKIPQVILVSHDEELKDAADHVIRIS 357
Score = 27.9 bits (60), Expect = 4.2
Identities = 8/36 (22%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 372 KHLIINNL----SLTIQPGEKI-GLVGRSGAGKSTI 402
+ + + N ++ E I ++G++G+GKS++
Sbjct: 4 ERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSL 39
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 56.2 bits (134), Expect = 9e-10
Identities = 17/150 (11%), Positives = 38/150 (25%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLHR 448
+ L G G GK+T+ + + + + ++ L R
Sbjct: 4 VFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSR 63
Query: 449 SIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKLSGGQRQ 508
+ R + + + + + D G V + K+ +
Sbjct: 64 VGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCSSGPGQRVCVIDEIGKMELFSQL 123
Query: 509 RIAIARVILKNAPILLLDEATSALDSEAEI 538
I R L ++L +
Sbjct: 124 FIQAVRQTLSTPGTIILGTIPVPKGKPLAL 153
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 43.9 bits (102), Expect = 4e-05
Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 503 SGGQRQRIAIARVI----LKNAPILLLDEATSALDSEAEIAIQKSLYNLMKGKT-VIAIA 557
SGG++ A+A + + +P +LDE +ALD I + I I+
Sbjct: 334 SGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVIS 393
Query: 558 HRLSTISAMDRLI 570
+ + D L+
Sbjct: 394 LKNTMFEKSDALV 406
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 34.2 bits (77), Expect = 0.021
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 386 GEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNI 424
G + L G G+GKSTI L + + ++
Sbjct: 4 GNILLLSGHPGSGKSTIAEALANLPGVPK--VHFHSDDL 40
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 33.7 bits (76), Expect = 0.027
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 378 NLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKY--GEILIDGQNISNVSQESLREQ 435
+ SL E + VG GAGKST L + + L Q + Q +LR+
Sbjct: 6 SSSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQG 65
Query: 436 IGMVTQDTSLLHRSIRDNILYGRPDASECELFN 468
+V +T+ S I + C FN
Sbjct: 66 KRVVIDNTNPDVPSRARYIQCAKDAGVPCRCFN 98
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 32.3 bits (72), Expect = 0.083
Identities = 11/32 (34%), Positives = 13/32 (40%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILID 420
I L G S AGKS I L + +D
Sbjct: 6 IILNGGSSAGKSGIVRCLQSVLPEPWLAFGVD 37
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 32.0 bits (71), Expect = 0.11
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 386 GEKIGLVGRSGAGKSTINNLLLR 408
G K+ + GR AGKS++ N L
Sbjct: 1 GMKVVIAGRPNAGKSSLLNALAG 23
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 32.0 bits (71), Expect = 0.12
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 383 IQPGEKIGLVGRSGAGKSTINNLLLR 408
I K+ +VGR GKST+ N +L
Sbjct: 5 ITDAIKVAIVGRPNVGKSTLFNAILN 30
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain
{Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 31.9 bits (71), Expect = 0.14
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
+GLVG AGKS++ + R
Sbjct: 4 VGLVGYPNAGKSSLLAAMTR 23
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain
{Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 31.4 bits (70), Expect = 0.17
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
+GLVG GKST+ +++
Sbjct: 4 VGLVGFPSVGKSTLLSVVSS 23
>d1umda_ c.36.1.11 (A:) Branched-chain alpha-keto acid
dehydrogenase, PP module {Thermus thermophilus [TaxId:
274]}
Length = 362
Score = 32.2 bits (72), Expect = 0.18
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 10/114 (8%)
Query: 252 DFLKKIYQQMRLISSFEIINHLLAMLLILGTTGCALFLWTKGILGIGAVAAATAMSLRLN 311
+ L+++Y+ M + +L+ G T G AA A++ +
Sbjct: 31 EKLRRLYRDMLAARMLDER---YTILIRTGKTSF-------IAPAAGHEAAQVAIAHAIR 80
Query: 312 GISHWVMWEIAALFESIGTIQDGMNMLSKKYKIVDNYNAKRLVVTNGKIFFKNV 365
WV ++ +L + + N R + + N
Sbjct: 81 PGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNF 134
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 31.5 bits (70), Expect = 0.18
Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 15/160 (9%)
Query: 389 IGLVGRSGAGKST-INNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLH 447
+ SG GK+T + L+ LI + + ++ + +
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 448 RSIRDNILYGRPDASECELFNAAKCAEAD--------IFIKSLTDEHGRKGYDAHVGEHG 499
+ + E EL + D + + + G
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 500 IKLSGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIA 539
+L R IA+A + N + LLD ++ +A
Sbjct: 125 EELVID-RHVIAVASDVPLNLDVALLD-----INDVEGLA 158
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 31.2 bits (69), Expect = 0.20
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
+ +VG+ GKST+ N LL
Sbjct: 8 VAIVGKPNVGKSTLLNNLLG 27
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 31.2 bits (69), Expect = 0.20
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
I GRS GKST+ L
Sbjct: 3 IIFAGRSNVGKSTLIYRLTG 22
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 31.2 bits (69), Expect = 0.25
Identities = 9/32 (28%), Positives = 12/32 (37%)
Query: 384 QPGEKIGLVGRSGAGKSTINNLLLRFYDIKYG 415
G I L G +GK I L + + G
Sbjct: 4 TQGFTIFLTGYMNSGKDAIARALQVTLNQQGG 35
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 30.9 bits (68), Expect = 0.26
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
+ +VGR GKST+ N L++
Sbjct: 3 VLIVGRPNVGKSTLFNKLVK 22
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 30.8 bits (68), Expect = 0.29
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
I +VGR GKST+ N LL
Sbjct: 8 IAIVGRPNVGKSTLLNKLLG 27
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 30.7 bits (68), Expect = 0.29
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 388 KIGLVGRSGAGKSTINNLLLR 408
++ +VG+ GKST+ N LL
Sbjct: 2 RMVIVGKPNVGKSTLLNRLLN 22
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 30.9 bits (68), Expect = 0.29
Identities = 9/33 (27%), Positives = 13/33 (39%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILID 420
K+ L+G G GKS + + D E
Sbjct: 3 KVLLLGAPGVGKSALARIFGGVEDGPEAEAAGH 35
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId:
2336]}
Length = 308
Score = 31.2 bits (69), Expect = 0.37
Identities = 15/52 (28%), Positives = 20/52 (38%)
Query: 519 NAPILLLDEATSALDSEAEIAIQKSLYNLMKGKTVIAIAHRLSTISAMDRLI 570
+P +LDE S LD ++ L K I I H + A D L
Sbjct: 241 PSPFYVLDEVDSPLDDYNAERFKRLLKENSKHTQFIVITHNKIVMEAADLLH 292
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.6 bits (68), Expect = 0.46
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 375 IINNLSLTIQPGEKIGLVGRSGAGKSTINNLLL 407
++ NL I ++G+ G GKS+ N ++
Sbjct: 21 LLGNLKQEDVNSLTILVMGKGGVGKSSTVNSII 53
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.0 bits (66), Expect = 0.49
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 384 QPGEKIGLVGRSGAGKSTINNLLLRFYDIKY 414
G + L G SGAGK+T++ L +
Sbjct: 17 FRGCTVWLTGLSGAGKTTVSMALEEYLVCHG 47
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 30.4 bits (68), Expect = 0.50
Identities = 12/77 (15%), Positives = 26/77 (33%)
Query: 341 KYKIVDNYNAKRLVVTNGKIFFKNVSFSYDQKHLIINNLSLTIQPGEKIGLVGRSGAGKS 400
K + D + +++ K + G+ + G SG GKS
Sbjct: 50 KMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKGKISTMAGLSGVGKS 109
Query: 401 TINNLLLRFYDIKYGEI 417
++ N + ++ E+
Sbjct: 110 SLLNAINPGLKLRVSEV 126
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 30.3 bits (67), Expect = 0.58
Identities = 19/78 (24%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 497 EHGIKLSGGQRQRIAI----ARVILKNAPILLLDEATSALDSEAEIAIQKSLYNLMKGKT 552
+ +SGG++ A+ A K AP L DE + LD + + K
Sbjct: 220 KRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEIDAHLDDANVKRVADLIKESSKESQ 279
Query: 553 VIAIAHRLSTISAMDRLI 570
I I R ++ D++I
Sbjct: 280 FIVITLRDVMMANADKII 297
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 29.8 bits (65), Expect = 0.59
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF 409
++ GRS AGKS+ N L
Sbjct: 18 EVAFAGRSNAGKSSALNTLTNQ 39
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.7 bits (65), Expect = 0.62
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILID 420
K+ +G AGK+T LL + + +
Sbjct: 2 KLLFLGLDNAGKTT---LLHMLKNDRLATLQPT 31
>d1xr4a2 c.124.1.2 (A:237-505) Putative citrate lyase alpha chain,
citF2 {Salmonella typhimurium [TaxId: 90371]}
Length = 269
Score = 30.2 bits (68), Expect = 0.63
Identities = 15/108 (13%), Positives = 27/108 (25%), Gaps = 14/108 (12%)
Query: 295 LGIGAVAAATAMSLRLNGISHWVMWEIAALFESIGTIQDGMNML--------SKKYKIVD 346
G G + A L H + +G I M L + D
Sbjct: 36 TGTGGASLAVTRFLEDKMRRHNITASFG-----LGGITGTMVDLHEKGLIKALLDTQSFD 90
Query: 347 NYNAKRLVVTNGKIFFKNVSFSYDQKHLI-INNLSLTIQPGEKIGLVG 393
A+ L I ++ L++ + +I +
Sbjct: 91 GDAARSLAQNPHHIEISTNQYANPASKGAACERLNVVMLSALEIDVNF 138
>d1w85a_ c.36.1.11 (A:) Pyruvate dehydrogenase E1-alpha, PdhA
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 365
Score = 30.2 bits (67), Expect = 0.70
Identities = 13/95 (13%), Positives = 28/95 (29%), Gaps = 14/95 (14%)
Query: 219 MTGRITDAYANIMTVKLFSHAGREANYARFAMI--DFLKKIYQQMRLISSFEIINHLLAM 276
++ T ++ + G N + + LK++ ++M + + L
Sbjct: 6 FAEQLEKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNR 65
Query: 277 LLILGTTGCALFLWTKGILGIG--AVAAATAMSLR 309
LG G A A+ +L
Sbjct: 66 QGRLGFY----------APTAGQEASQIASHFALE 90
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 29.5 bits (65), Expect = 0.74
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYG 415
I + G SG GKST+ L Y +G
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFG 30
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 29.5 bits (65), Expect = 0.75
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYG 415
+ L G SGAGKST+ L + + +G
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHSSIFG 29
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 29.6 bits (65), Expect = 0.78
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKY 414
+ G +G GKST L D
Sbjct: 5 YIITGPAGVGKSTTCKRLAAQLDNSA 30
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 29.3 bits (64), Expect = 0.84
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEI 417
+I ++G GAGK+T +L R +
Sbjct: 7 RILILGLDGAGKTT---ILYRLQVGEVVTT 33
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 29.2 bits (64), Expect = 0.85
Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 6/71 (8%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLH 447
+I +VG AGK+T +L + K GEI+ I + + I D
Sbjct: 2 RILMVGLDAAGKTT---ILYKL---KLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 55
Query: 448 RSIRDNILYGR 458
+ Y +
Sbjct: 56 KIRPLWRHYFQ 66
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 29.9 bits (66), Expect = 0.86
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 388 KIGLVGRSGAGKSTINNLL 406
+IG+VG+ GKST +
Sbjct: 2 EIGVVGKPNVGKSTFFSAA 20
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 29.6 bits (65), Expect = 0.88
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYD 411
I +VG GK+ I+ L R+ +
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLN 27
>d1qs0a_ c.36.1.11 (A:) 2-oxoisovalerate dehydrogenase (E1B), PP
module {Pseudomonas putida [TaxId: 303]}
Length = 407
Score = 29.8 bits (66), Expect = 0.90
Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 12/60 (20%)
Query: 252 DFLKKIYQQMRLISSFEIINHLLAMLLILGTTGCALFLWTKGILGIG--AVAAATAMSLR 309
L++ + M F+ + + + +G A+ + A++L
Sbjct: 74 QILRQGMRAMLKTRIFDSRMVVAQRQKKMSFY----------MQSLGEEAIGSGQALALN 123
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 29.1 bits (64), Expect = 0.92
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
I L G G GK+T+ L +KY
Sbjct: 6 NILLTGTPGVGKTTLGKELASKSGLKY 32
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 29.3 bits (64), Expect = 0.94
Identities = 7/22 (31%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF 409
++ ++G AGK+T +L +F
Sbjct: 4 RLLMLGLDNAGKTT---ILKKF 22
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1
ATP synthase {Spinach (Spinacia oleracea), chloroplast
[TaxId: 3562]}
Length = 276
Score = 29.5 bits (66), Expect = 1.0
Identities = 7/32 (21%), Positives = 16/32 (50%)
Query: 371 QKHLIINNLSLTIQPGEKIGLVGRSGAGKSTI 402
Q LI + + + G++ ++G GK+ +
Sbjct: 52 QTGLIAIDAMIPVGRGQRELIIGDRQTGKTAV 83
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.3 bits (64), Expect = 1.0
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +VG G GKS L ++F +
Sbjct: 8 KLVVVGGGGVGKSA---LTIQFIQSYFVS 33
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 296
Score = 29.4 bits (65), Expect = 1.0
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 388 KIGLVGRSGAGKSTINNLL 406
K G+VG GKST +
Sbjct: 12 KTGIVGMPNVGKSTFFRAI 30
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 28.8 bits (63), Expect = 1.1
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 391 LVGRSGAGKSTINNLLLRFYDIKY 414
L+G SG+GKS + + + +
Sbjct: 11 LMGVSGSGKSAVASEVAHQLHAAF 34
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal
domain {Haemophilus influenzae [TaxId: 727]}
Length = 278
Score = 29.5 bits (66), Expect = 1.1
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 388 KIGLVGRSGAGKSTINNLL 406
K G+VG GKST+ N L
Sbjct: 4 KCGIVGLPNVGKSTLFNAL 22
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 29.4 bits (66), Expect = 1.1
Identities = 6/25 (24%), Positives = 14/25 (56%)
Query: 378 NLSLTIQPGEKIGLVGRSGAGKSTI 402
+ + I G++ ++G GK++I
Sbjct: 60 DSLVPIGRGQRELIIGDRQTGKTSI 84
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 29.7 bits (66), Expect = 1.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 388 KIGLVGRSGAGKSTINNLLL 407
+ + G +G+GKS+ N L
Sbjct: 58 NVAVTGETGSGKSSFINTLR 77
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 29.1 bits (64), Expect = 1.2
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYG 415
+ L+G G G+ I N L+ + ++
Sbjct: 6 LVLLGAHGVGRRHIKNTLITKHPDRFA 32
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 28.8 bits (63), Expect = 1.4
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 386 GEKIGLVGRSGAGKSTINNLL 406
G I + G G GK+++ ++
Sbjct: 5 GINILITGTPGTGKTSMAEMI 25
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 28.5 bits (62), Expect = 1.6
Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
++ LVG +GK+T + ++ E
Sbjct: 4 ELTLVGLQYSGKTT---FVNVIASGQFNE 29
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.5 bits (62), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
I LVG GAGKSTI L + ++++
Sbjct: 4 NIFLVGPMGAGKSTIGRQLAQQLNMEF 30
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 28.3 bits (62), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
KI ++G SG GKS+ LLLRF D +
Sbjct: 9 KILIIGESGVGKSS---LLLRFTDDTFDP 34
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 28.6 bits (62), Expect = 1.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 388 KIGLVGRSGAGKSTINNLL 406
+I L GRS GKS+ N L
Sbjct: 25 EIALAGRSNVGKSSFINSL 43
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 28.6 bits (62), Expect = 1.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 389 IGLVGRSGAGKSTINNLL 406
+G+ G S +GK+T+ N L
Sbjct: 25 LGIDGLSRSGKTTLANQL 42
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 28.4 bits (62), Expect = 1.9
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +VG GK+ LL+ ++ E
Sbjct: 4 KLVIVGDGACGKTC---LLIVNSKDQFPE 29
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 28.3 bits (62), Expect = 1.9
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
+VG +GK+T+ +
Sbjct: 4 WQVVGYKHSGKTTLMEKWVA 23
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.0 bits (61), Expect = 2.2
Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Query: 388 KIGLVGRSGAGKSTINNLL-----LRFYDIKY 414
K LVG G+GKSTI L + D
Sbjct: 3 KAVLVGLPGSGKSTIGRRLAKALGVGLLDTDV 34
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 28.5 bits (62), Expect = 2.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 383 IQPGEKIGLVGRSGAGKSTI 402
+ G LV GAGKS +
Sbjct: 26 MVAGTVGALVSPGGAGKSML 45
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 28.1 bits (61), Expect = 2.3
Identities = 7/29 (24%), Positives = 12/29 (41%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K +VG GK+ LL+ + +
Sbjct: 7 KCVVVGDGAVGKTC---LLISYTTNAFPG 32
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase
domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 28.5 bits (62), Expect = 2.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 376 INNLSLTIQPGEKIGLVGRSGAGKSTI 402
IN+ +L + GE I + SG GKST
Sbjct: 25 INDKTLGARGGEVIMVTSGSGMGKSTF 51
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 28.6 bits (64), Expect = 2.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 378 NLSLTIQPGEKIGLVGRSGAGKSTINNLLLRFYDIKYGEILI 419
+L G KIGL G +G GK+ + L+ +G +
Sbjct: 60 DLLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSV 101
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.0 bits (61), Expect = 2.5
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 386 GEKIGLVGRSGAGKSTINNLLLRFYD 411
G + L G S GKST+ L
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLRERIP 27
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 27.6 bits (60), Expect = 2.7
Identities = 11/43 (25%), Positives = 15/43 (34%), Gaps = 5/43 (11%)
Query: 387 EKIGLVGRSGAGKSTINNLL-----LRFYDIKYGEILIDGQNI 424
E I +VG G G +T+ L F D G +
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTV 45
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 27.7 bits (60), Expect = 2.7
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ ++G SG GK++ L+ R+ + KY +
Sbjct: 4 KVIILGDSGVGKTS---LMHRYVNDKYSQ 29
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 27.8 bits (61), Expect = 2.8
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
KI L+G SG GKS LL+RF + K+
Sbjct: 4 KILLIGDSGVGKSC---LLVRFVEDKFNP 29
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 28.5 bits (63), Expect = 2.8
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 393 GRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQI 436
G SGAGK+ ++ + + + S+ + SL +QI
Sbjct: 128 GESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQI 171
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 27.6 bits (60), Expect = 2.9
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 5/29 (17%)
Query: 389 IGLVGRSGAGKSTINNLL-----LRFYDI 412
I +G G+GKST+ L L F D
Sbjct: 3 IVFIGFMGSGKSTLARALAKDLDLVFLDS 31
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 27.7 bits (60), Expect = 2.9
Identities = 8/29 (27%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ ++G SG GK++ L+ ++ + K+
Sbjct: 4 KVIILGDSGVGKTS---LMNQYVNKKFSN 29
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.4 bits (59), Expect = 3.0
Identities = 18/113 (15%), Positives = 39/113 (34%), Gaps = 11/113 (9%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLHR 448
I +G G+GKST E + N++++ R+ I + +
Sbjct: 5 ILTIGCPGSGKSTW-----------AREFIAKNPGFYNINRDDYRQSIMAHEERDEYKYT 53
Query: 449 SIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIK 501
++ I+ G + + + I + + R ++ E+G K
Sbjct: 54 KKKEGIVTGMQFDTAKSILYGGDSVKGVIISDTNLNPERRLAWETFAKEYGWK 106
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 27.7 bits (60), Expect = 3.2
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +VG G GKS L ++F+ +
Sbjct: 6 KLVVVGDGGVGKSA---LTIQFFQKIFVP 31
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 27.5 bits (60), Expect = 3.2
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G SG GKS LLLRF D Y
Sbjct: 8 KLLLIGNSGVGKSC---LLLRFSDDTYTN 33
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 27.7 bits (60), Expect = 3.2
Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
KI +VG S GK+ LL F + E
Sbjct: 4 KIVVVGDSQCGKTA---LLHVFAKDCFPE 29
>d2bfda1 c.36.1.11 (A:6-400) Branched-chain alpha-keto acid
dehydrogenase, PP module {Human (Homo sapiens) [TaxId:
9606]}
Length = 395
Score = 28.3 bits (62), Expect = 3.2
Identities = 13/89 (14%), Positives = 31/89 (34%), Gaps = 14/89 (15%)
Query: 225 DAYANIMTVKLFSHAGREANYARFAMI--DFLKKIYQQMRLISSFEIINHLLAMLLILGT 282
+ + I ++ G+ N + + + + K+Y+ M L+++ + I L G
Sbjct: 21 NVISGIPIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRI---LYESQRQGR 77
Query: 283 TGCALFLWTKGILGIG--AVAAATAMSLR 309
+ G +A +L
Sbjct: 78 ISFY-------MTNYGEEGTHVGSAAALD 99
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 27.6 bits (60), Expect = 3.3
Identities = 10/43 (23%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQES 431
IG+ G + +GKS++ +++ + E+ + + +SQ+S
Sbjct: 5 IGVSGGTASGKSSVCAKIVQL--LGQNEVDYRQKQVVILSQDS 45
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 27.9 bits (61), Expect = 3.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 391 LVGRSGAGKSTINNLLLR 408
+ SGAGKS++ LL+
Sbjct: 7 VSAPSGAGKSSLIQALLK 24
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 28.0 bits (61), Expect = 3.4
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIK 413
I L G +GK T + ++ Y
Sbjct: 3 LIFLSGVKRSGKDTTADFIMSNYSAV 28
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 27.6 bits (60), Expect = 3.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 389 IGLVGRSGAGKSTINNLL 406
IG+ G G+GKST+ LL
Sbjct: 6 IGITGNIGSGKSTVAALL 23
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 27.7 bits (60), Expect = 3.5
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 388 KIGLVGRSGAGKSTINNLLLR 408
+ VG +GK+ + LL
Sbjct: 2 AVLFVGLCDSGKTLLFVRLLT 22
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 27.5 bits (60), Expect = 3.6
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +G SG GK+T L R+ D K+
Sbjct: 7 KLLALGDSGVGKTT---FLYRYTDNKFNP 32
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 27.4 bits (59), Expect = 3.6
Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
KI ++G GKS+ L ++F + ++ +
Sbjct: 6 KIAILGYRSVGKSS---LTIQFVEGQFVD 31
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 27.3 bits (59), Expect = 3.8
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K +VG GK+ LL+ + + + E
Sbjct: 11 KCVVVGDGAVGKTC---LLMSYANDAFPE 36
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 27.3 bits (59), Expect = 3.8
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
++ +VG G GKS L ++F +
Sbjct: 7 RLVVVGGGGVGKSA---LTIQFIQSYFVT 32
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 27.2 bits (59), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF 409
+I L+G AGK+T LL +
Sbjct: 18 RILLLGLDNAGKTT---LLKQL 36
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 27.9 bits (61), Expect = 3.9
Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 15/225 (6%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILI--DGQNISNVSQESLREQIGMV--TQDT 443
++G+ G GAGKST + ++ + + L ++ M +
Sbjct: 56 RLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAE 115
Query: 444 SLLHRSIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIKL- 502
+ R + + G EL + A D+ I T G+ +
Sbjct: 116 AAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVI-VETVGVGQSETEVARMVDCFISL 174
Query: 503 --SGGQRQRIAIARVILKNAPILLLDEATSALDSEAEIAIQKSLYNL-MKGKTVIAIAHR 559
+GG I + +++ A ++++++ + IA L + + R
Sbjct: 175 QIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYESALHILRRKYDEWQPR 234
Query: 560 LSTISAM--DRLIVLDNGCVAEEGSHLDLLKKNGLYSRLWRHQNK 602
+ T SA+ + + + + L +G ++ + Q+
Sbjct: 235 VLTCSALEKRGIDEIWHAIID----FKTALTASGRLQQVRQQQSV 275
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 27.3 bits (59), Expect = 4.0
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K +VG GK+ LL+ + K+
Sbjct: 5 KCVVVGDGAVGKTC---LLISYTTNKFPS 30
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 27.2 bits (59), Expect = 4.1
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K ++G +G GKS LL +F + K+ +
Sbjct: 7 KFLVIGNAGTGKSC---LLHQFIEKKFKD 32
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 27.3 bits (59), Expect = 4.2
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ LVG G GK+T + R ++ +
Sbjct: 5 KLVLVGDGGTGKTT---FVKRHLTGEFEK 30
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 27.5 bits (60), Expect = 4.2
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 384 QPGEKIGLVGRSGAGKSTINNLLLRFYDIKY 414
Q G I L G S +GKST+ L
Sbjct: 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDR 52
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 27.3 bits (59), Expect = 4.2
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ + GR+G GKS L++RF ++
Sbjct: 4 KLAIFGRAGVGKSA---LVVRFLTKRFIW 29
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 27.0 bits (58), Expect = 4.2
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
++ L+G G GKST L F +
Sbjct: 5 RVVLIGEQGVGKST---LANIFAGVHD 28
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 27.2 bits (59), Expect = 4.4
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +VG G GKS L L+F ++ E
Sbjct: 6 KVIMVGSGGVGKSA---LTLQFMYDEFVE 31
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.2 bits (59), Expect = 4.4
Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 6/138 (4%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY---GEILIDGQNISNVSQESLREQIGMVTQDTS 444
++ L+G GAGK T L I GE+ + + S
Sbjct: 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPS 61
Query: 445 LLHRSIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKG---YDAHVGEHGIK 501
L + D+ L A+ L + E + + + G + V E +
Sbjct: 62 DLTNELVDDRLNNPDAANGFILDGYPRSVEQAKALHEMLERRGTDIDAVLEFRVSEEVLL 121
Query: 502 LSGGQRQRIAIARVILKN 519
R R ++ N
Sbjct: 122 ERLKGRGRADDTDDVILN 139
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 27.2 bits (59), Expect = 4.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
++ L+G GAGK T L + +
Sbjct: 4 RMVLIGPPGAGKGTQAPNLQERFHAAH 30
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 27.0 bits (58), Expect = 4.7
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEI 417
K+ +G AGK+T LL D + G+
Sbjct: 15 KLVFLGLDNAGKTT---LLHMLKDDRLGQH 41
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 26.9 bits (58), Expect = 4.7
Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G +G GKS+ ++ RF + +
Sbjct: 6 KVCLLGDTGVGKSS---IMWRFVEDSFDP 31
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 27.1 bits (59), Expect = 4.8
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
KI ++G S GK++ L R+ D +
Sbjct: 7 KILIIGNSSVGKTS---FLFRYADDSFTP 32
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 27.2 bits (59), Expect = 4.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
+I L+G AGK T ++ Y I
Sbjct: 2 RIILLGAPVAGKGTQAQFIMEKYGIPQ 28
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 26.8 bits (58), Expect = 4.8
Identities = 7/29 (24%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +G GK++ L+ RF +
Sbjct: 2 KLVFLGEQSVGKTS---LITRFMYDSFDN 27
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 27.5 bits (60), Expect = 4.9
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTSLLH 447
++G+ G G GKST + L ++ + V S G + D + +
Sbjct: 53 RVGITGVPGVGKSTTIDALGSLLTAAGHKVA-----VLAVDPSS-TRTGGSILGDKTRMA 106
Query: 448 RSIRDNILYGRPDASECELFNAAKCAEADI 477
R D + RP S L A +
Sbjct: 107 RLAIDRNAFIRPSPSSGTLGGVAAKTRETM 136
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 26.9 bits (58), Expect = 5.0
Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILI-DGQNISNVSQESLREQI 436
+I ++G GAGK+T +L R + G N+ +S ++L+ +
Sbjct: 19 RILILGLDGAGKTT---ILYRLQIGEVVTTKPTIGFNVETLSYKNLKLNV 65
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 27.0 bits (58), Expect = 5.0
Identities = 7/22 (31%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF 409
K+ +VG GKS+ ++ R+
Sbjct: 4 KMVVVGNGAVGKSS---MIQRY 22
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 26.8 bits (58), Expect = 5.2
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
+ L+G GAGK T ++ Y I +
Sbjct: 2 NLVLMGLPGAGKGTQAEKIVAAYGIPH 28
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 26.9 bits (58), Expect = 5.2
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G + GKS+ ++LRF + E
Sbjct: 5 KLVLLGEAAVGKSS---IVLRFVSNDFAE 30
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 26.9 bits (58), Expect = 5.3
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G S GKS+ L+LRF ++ E
Sbjct: 8 KLVLLGESAVGKSS---LVLRFVKGQFHE 33
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 5.3
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
K+ LVG SG GK+ LL+RF D +
Sbjct: 8 KVMLVGDSGVGKTC---LLVRFKDGAF 31
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 26.9 bits (58), Expect = 5.4
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 389 IGLVGRSGAGKSTINNLLLR 408
I + G +GK+++ LL
Sbjct: 6 IIIAGPQNSGKTSLLTLLTT 25
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 26.9 bits (58), Expect = 5.6
Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
++G++G + +GKS+ L+ RF Y
Sbjct: 7 RLGVLGDARSGKSS---LIHRFLTGSY 30
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.0 bits (58), Expect = 5.6
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
+ ++G +GKS + N L ++
Sbjct: 9 TVAILGGESSGKSVLVNKLAAVFNTTS 35
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 26.8 bits (58), Expect = 5.6
Identities = 9/29 (31%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G GK++ L+LR+ + K+ +
Sbjct: 5 KVVLLGEGCVGKTS---LVLRYCENKFND 30
>d2g39a2 c.124.1.2 (A:224-497) Acetyl-CoA hydrolase (PA5445)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 274
Score = 27.2 bits (60), Expect = 5.8
Identities = 13/95 (13%), Positives = 29/95 (30%), Gaps = 10/95 (10%)
Query: 295 LGIGAVAAATAMSLRLNGISHWVMWEIAALFESIGTIQDGMNMLSKKYKIVDNYNAKRLV 354
GIG++A A L + + M+ +QD L K+ + +
Sbjct: 39 AGIGSIANAVMCGLIESPFENLTMYS--------EVLQDSTFDLIDAGKL-RFASGSSIT 89
Query: 355 VTNGKIFFKNVSFSYDQKHLIINNLSLTIQPGEKI 389
++ + + K ++ E +
Sbjct: 90 LSPRRNADVFGNL-ERYKDKLVLRPQEISNHPEVV 123
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 26.7 bits (58), Expect = 6.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 389 IGLVGRSGAGKSTINNLL 406
+ L G G+GKST+ N
Sbjct: 6 VALTGGIGSGKSTVANAF 23
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 26.8 bits (58), Expect = 6.1
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
K+ + G +GK T L+ Y + +
Sbjct: 5 KVMISGAPASGKGTQCELIKTKYQLAH 31
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 26.8 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G SG GKS LL RF ++
Sbjct: 6 KVVLIGDSGVGKSN---LLSRFTRNEFNL 31
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.7 bits (58), Expect = 6.2
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY--GEILIDGQNISNVSQESLREQIGMVTQDTS 444
KI L+G +G GK+ L+ RF + G+ G + + E E++ + DT+
Sbjct: 7 KIVLIGNAGVGKTC---LVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTA 62
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 26.5 bits (57), Expect = 6.3
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
KI ++G S GK+ L RF ++
Sbjct: 4 KIIVIGDSNVGKTC---LTYRFCAGRF 27
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.8 bits (58), Expect = 6.4
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ ++G G GKS L ++F + E
Sbjct: 5 KVVVLGSGGVGKSA---LTVQFVTGTFIE 30
>d2inca1 a.25.1.2 (A:2-492) Toluene, o-xylene monooxygenase
oxygenase subunit TouA {Pseudomonas stutzeri [TaxId:
316]}
Length = 491
Score = 27.2 bits (60), Expect = 6.5
Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 7/87 (8%)
Query: 193 AYIYTLIYFIPRLNKTAESQATARSLMTGRITD-AYANIMTVKLFSHAGREA------NY 245
+ Y++ + R + S M A + R A N
Sbjct: 66 SGAYSIKAALERDGFVDRADPGWVSTMQLHFGAIALEEYAASTAEARMARFAKAPGNRNM 125
Query: 246 ARFAMIDFLKKIYQQMRLISSFEIINH 272
A F M+D + Q+ + +
Sbjct: 126 ATFGMMDENRHGQIQLYFPYANVKRSR 152
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 26.5 bits (57), Expect = 6.6
Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEI 417
K+ +VG AGK+T +L +F +
Sbjct: 17 KVIIVGLDNAGKTT---ILYQFSMNEVVHT 43
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 26.8 bits (58), Expect = 6.6
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 389 IGLVGRSGAGKSTINNLL 406
+GL G G+GK+TI NL
Sbjct: 5 VGLTGGIGSGKTTIANLF 22
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 26.6 bits (58), Expect = 6.6
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 17/52 (32%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF--------------YDIKYGEILIDGQNIS 425
K+ L+G SG GK+ +L RF D K I +DG+ I
Sbjct: 8 KLLLIGDSGVGKTC---VLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIK 56
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 26.9 bits (58), Expect = 6.8
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILI 419
+ + G G G +T + L + + +
Sbjct: 4 VVVTGVPGVGSTTSSQLAMDNLRKEGVNYKM 34
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 26.5 bits (57), Expect = 6.9
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ ++G G GKS L ++F + E
Sbjct: 5 KLVVLGSGGVGKSA---LTVQFVQGIFVE 30
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.6 bits (58), Expect = 7.1
Identities = 7/27 (25%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKY 414
++ L+G +GKSTI + + +
Sbjct: 8 RLLLLGAGESGKSTI---VKQMRILHV 31
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (58), Expect = 7.2
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIK 413
KI L+G +GKST L + I
Sbjct: 4 KILLLGAGESGKSTF---LKQMRIIH 26
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 26.5 bits (57), Expect = 7.2
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
++ + G G GKS+ L+LRF + E
Sbjct: 4 RVAVFGAGGVGKSS---LVLRFVKGTFRE 29
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 26.8 bits (59), Expect = 7.4
Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 8/81 (9%)
Query: 389 IGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESL-REQIGMVTQDTSLLH 447
I + G SGAG ST+ + + + +G ++ ++ R + + +
Sbjct: 7 ISVTGSSGAGTSTVKHTFDQIFR-------REGVKAVSIEGDAFHRFNRADMKAELDRRY 59
Query: 448 RSIRDNILYGRPDASECELFN 468
+ + +A+E +
Sbjct: 60 AAGDATFSHFSYEANELKELE 80
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 26.5 bits (57), Expect = 7.4
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ L+G G GKS+ L+ R+ K+
Sbjct: 8 KVILLGDGGVGKSS---LMNRYVTNKFDT 33
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 26.5 bits (57), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Query: 388 KIGLVGRSGAGKSTINNLLLRF 409
K+ L+G +GKSTI + +
Sbjct: 4 KLLLLGAGESGKSTI---VKQM 22
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 26.5 bits (57), Expect = 8.0
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K+ +VG G GKS L ++ + +
Sbjct: 5 KLVVVGAGGVGKSA---LTIQLIQNHFVD 30
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 26.5 bits (57), Expect = 8.3
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQIGMVTQDTS 444
+I ++G AGK+T +L + K G+ + + + + + D
Sbjct: 14 RILMLGLDAAGKTT---ILYKL---KLGQSVTTIPTVGFNVETVTYKNVKFNVWDVG 64
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 26.6 bits (58), Expect = 8.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 391 LVGRSGAGKSTINNLLLRFYDIKYGEI 417
G+SG GKS++ N + ++ EI
Sbjct: 102 FAGQSGVGKSSLLNAISPELGLRTNEI 128
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 26.5 bits (57), Expect = 8.6
Identities = 16/137 (11%), Positives = 36/137 (26%), Gaps = 4/137 (2%)
Query: 383 IQPGEKIGLVGRSGAGKSTINNLLLRF-YDIKYGEILIDGQNISNVSQESLREQIGMVTQ 441
+ G + G SG GK+ ++F Y+ + + + +
Sbjct: 23 LPIGRSTLVSGTSGTGKTL---FSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGW 79
Query: 442 DTSLLHRSIRDNILYGRPDASECELFNAAKCAEADIFIKSLTDEHGRKGYDAHVGEHGIK 501
D + L + IL PD E+ + I ++ + +
Sbjct: 80 DLAKLVDEGKLFILDASPDPEGQEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQ 139
Query: 502 LSGGQRQRIAIARVILK 518
++
Sbjct: 140 QYDASSVVRRELFRLVA 156
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 27.0 bits (59), Expect = 9.1
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 393 GRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNVSQESLREQI 436
G SGAGK+ +++++ + S Q +L +QI
Sbjct: 130 GESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQI 173
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 26.0 bits (56), Expect = 9.1
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGE 416
K ++G +G GKS LLL+F D ++
Sbjct: 5 KYIIIGDTGVGKSC---LLLQFTDKRFQP 30
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.4 bits (57), Expect = 9.3
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 385 PGEKIGLVGRSGAGKSTINNLLLRFYDIKY 414
G + L+G GAGK T L + + + +
Sbjct: 2 KGVRAVLLGPPGAGKGTQAPKLAKNFCVCH 31
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.4 bits (57), Expect = 9.4
Identities = 9/40 (22%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Query: 388 KIGLVGRSGAGKSTINNLLLRFYDIKYGEILIDGQNISNV 427
K+ L+G +GKST + + I + G
Sbjct: 4 KLLLLGTGESGKSTF---IKQMRIIHGSGVPTTGIIEYPF 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.326 0.141 0.411
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,250,511
Number of extensions: 106962
Number of successful extensions: 639
Number of sequences better than 10.0: 1
Number of HSP's gapped: 585
Number of HSP's successfully gapped: 209
Length of query: 604
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 513
Effective length of database: 1,158,166
Effective search space: 594139158
Effective search space used: 594139158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (26.1 bits)