BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13351
(837 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A6SZQ1|RS2_JANMA 30S ribosomal protein S2 OS=Janthinobacterium sp. (strain
Marseille) GN=rpsB PE=3 SV=2
Length = 248
Score = 352 bits (902), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 153/218 (70%), Positives = 192/218 (88%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRN+IHI+NLEKT+ MY++A++YI QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNRIHIVNLEKTMGMYQEAMKYIRQLSSNRGTVL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKEM+ I +GS++K
Sbjct: 68 FVGTKRQARETIAAEAQRAGMPYVDQRWLGGMLTNFKTIKTSIKRLKEMEASIEDGSVQK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVVD
Sbjct: 128 LSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+G+ YVIPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 188 TNHSPEGVTYVIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|A4G4S1|RS2_HERAR 30S ribosomal protein S2 OS=Herminiimonas arsenicoxydans GN=rpsB
PE=3 SV=1
Length = 248
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 152/218 (69%), Positives = 191/218 (87%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ YIFGHRN+IHI+NLEKTL MY++A++YI QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIVNLEKTLGMYQEAMKYIKQLSSNRGTVL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR IA EA RAGMP++DQRWLGG+LTNFKTIKTSI+RLKE++ + +GS+ K
Sbjct: 68 FVGTKRQARETIAAEAARAGMPYVDQRWLGGMLTNFKTIKTSIKRLKELEALVEDGSMEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKEAL+F R+++KL + IGGIK+M IPDAIF++DVGYHKGA++EA KL IP+IGVVD
Sbjct: 128 LSKKEALMFEREKIKLEKSIGGIKDMGGIPDAIFVVDVGYHKGAITEAAKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+G+ Y+IPGNDDS+K+I LY +G+ DA L+ +
Sbjct: 188 TNHSPEGVAYIIPGNDDSSKAIMLYARGVADAILEGRA 225
>sp|B2UB06|RS2_RALPJ 30S ribosomal protein S2 OS=Ralstonia pickettii (strain 12J)
GN=rpsB PE=3 SV=1
Length = 247
Score = 325 bits (834), Expect = 6e-88, Method: Composition-based stats.
Identities = 148/217 (68%), Positives = 186/217 (85%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY+ A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYQDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMPF+D RWLGG+LTNFKT+KTSI+RLK+M++ G+
Sbjct: 68 FVGTKRQSREILAEEAARAGMPFVDSRWLGGMLTNFKTVKTSIKRLKDMEVAKEAGATET 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVVD
Sbjct: 128 MSKKEALMFEREMDKLVKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q0KA16|RS2_CUPNH 30S ribosomal protein S2 OS=Cupriavidus necator (strain ATCC 17699
/ H16 / DSM 428 / Stanier 337) GN=rpsB PE=3 SV=1
Length = 248
Score = 322 bits (825), Expect = 8e-87, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 186/217 (85%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+L
Sbjct: 8 MLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 68 FVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALET 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ +KL + IGGIK+M +PDAIF++DVGYHK AV+EA KL +P+IGVVD
Sbjct: 128 MSKKEALMFEREMLKLEKSIGGIKDMGGVPDAIFVVDVGYHKIAVTEANKLGVPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q8XZJ1|RS2_RALSO 30S ribosomal protein S2 OS=Ralstonia solanacearum (strain GMI1000)
GN=rpsB PE=3 SV=1
Length = 247
Score = 320 bits (821), Expect = 2e-86, Method: Composition-based stats.
Identities = 146/217 (67%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYLDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 68 FVGTKRQSREILAEEAARAGMPYVDSRWLGGMLTNFKTVKISIKRLKDMEAAKEAGALES 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVVD
Sbjct: 128 MSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEAAKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|B3R2B7|RS2_CUPTR 30S ribosomal protein S2 OS=Cupriavidus taiwanensis (strain R1 /
LMG 19424) GN=rpsB PE=3 SV=1
Length = 247
Score = 320 bits (820), Expect = 3e-86, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 185/217 (85%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+L
Sbjct: 8 MLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDAMKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 68 FVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALET 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ +KL + IGGIK M +PDAIF++DVGYHK AV+EA KL IP+IGVVD
Sbjct: 128 MSKKEALMFEREMIKLEKSIGGIKEMGGVPDAIFVVDVGYHKIAVTEANKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q2L162|RS2_BORA1 30S ribosomal protein S2 OS=Bordetella avium (strain 197N) GN=rpsB
PE=3 SV=1
Length = 249
Score = 320 bits (820), Expect = 3e-86, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 183/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEATKFVKQLAARGGNIL 66
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR AR ++A EA R GMPF+D RWLGG+LTNFKT+K+SI+RLKEM++ + +GS+ +
Sbjct: 67 FVGTKRAARELVATEAERCGMPFVDARWLGGMLTNFKTVKSSIKRLKEMEVMVADGSVER 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VVD
Sbjct: 127 LTKKEGLLFQRELDKLNKAIGGIKDMNGLPDALFVIDVGYHKIAVAEARTLGIPVVAVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSPDG++Y+IPGNDDSA++IALY KGI DA L+ +
Sbjct: 187 TNHSPDGVDYIIPGNDDSARAIALYAKGIADAVLEGR 223
>sp|Q470D7|RS2_CUPPJ 30S ribosomal protein S2 OS=Cupriavidus pinatubonensis (strain
JMP134 / LMG 1197) GN=rpsB PE=3 SV=1
Length = 247
Score = 320 bits (819), Expect = 4e-86, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 185/217 (85%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT++
Sbjct: 8 MLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTIM 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+KTSI+RLK+M+ G++
Sbjct: 68 FVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKTSIKRLKDMEAAKEAGALDT 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ +KL + IGGIK M IPDAIF++DVGYHK AV+EA KL IP+IGVVD
Sbjct: 128 MSKKEALMFEREMIKLEKSIGGIKEMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q1LNF8|RS2_RALME 30S ribosomal protein S2 OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=rpsB PE=3 SV=1
Length = 247
Score = 318 bits (814), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M++ A++Y+ QL ++GT+L
Sbjct: 8 MLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTVL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R ++A EA RAGMP++D RWLGG+LTNFKT+K SI+RLK+M+ G++
Sbjct: 68 FVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALET 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEAL+F R+ KL + IGGIK+M IPDAIF++DVGYHK AV+EA KL IP+IGVVD
Sbjct: 128 MSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGR 224
>sp|Q63T12|RS2_BURPS 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
K96243) GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NAU8|RS2_BURP6 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain 668)
GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q3JR28|RS2_BURP1 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1710b) GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3NWN1|RS2_BURP0 30S ribosomal protein S2 OS=Burkholderia pseudomallei (strain
1106a) GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A1V569|RS2_BURMS 30S ribosomal protein S2 OS=Burkholderia mallei (strain SAVP1)
GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q62JC4|RS2_BURMA 30S ribosomal protein S2 OS=Burkholderia mallei (strain ATCC 23344)
GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A2SB72|RS2_BURM9 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10229)
GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A3MKU3|RS2_BURM7 30S ribosomal protein S2 OS=Burkholderia mallei (strain NCTC 10247)
GN=rpsB PE=3 SV=1
Length = 246
Score = 317 bits (813), Expect = 2e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 184/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA+RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEALRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|A1WHU2|RS2_VEREI 30S ribosomal protein S2 OS=Verminephrobacter eiseniae (strain
EF01-2) GN=rpsB PE=3 SV=1
Length = 250
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 183/218 (83%), Gaps = 1/218 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEK+L ++++A +++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKSLPLFQQAQKFVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A EA+RAGMPF+DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 68 MVGTKRQAREILATEALRAGMPFVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LDS 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKE L F R+ KL + IGGI++M+ +P+AIF+IDVG+HK AV+EA KL I +IGVVD
Sbjct: 127 LSKKEQLTFSREIDKLEKDIGGIQDMSALPNAIFVIDVGFHKIAVAEAKKLGIALIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 187 TNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|Q2YBA7|RS2_NITMU 30S ribosomal protein S2 OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=rpsB PE=3 SV=2
Length = 248
Score = 317 bits (811), Expect = 3e-85, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 183/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFW+PKM+ YIFGHRNKIHIINLEKTL MY++A+ Y+ QL +KGT+L
Sbjct: 8 MLEAGVHFGHQTRFWSPKMAPYIFGHRNKIHIINLEKTLVMYQEAMNYVRQLAANKGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR ++ EA+R G PF+DQRWLGG+LTNFKTIK S++RL +M+ + +G++ K
Sbjct: 68 FVGTKRQARDIVREEAMRCGSPFVDQRWLGGMLTNFKTIKQSVKRLHDMETMMEDGTLDK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKEAL R+ KLNR +GGIK+M +PDA+F+IDVGY KGA++EA KL IPI+G+VD
Sbjct: 128 LSKKEALDLQRELEKLNRSLGGIKDMKNLPDAMFVIDVGYQKGAITEARKLGIPIVGIVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
+NHSP G++YVIPGNDDS+++I LY +G+ DA L+ +
Sbjct: 188 SNHSPAGVDYVIPGNDDSSQAIRLYARGVADAILEGR 224
>sp|B2JIC6|RS2_BURP8 30S ribosomal protein S2 OS=Burkholderia phymatum (strain DSM 17167
/ STM815) GN=rpsB PE=3 SV=1
Length = 250
Score = 316 bits (809), Expect = 5e-85, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 183/217 (84%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA A RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAEAAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDD++K++ALYT+G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDASKAVALYTQGVADAILEGR 224
>sp|A1TN69|RS2_ACIAC 30S ribosomal protein S2 OS=Acidovorax citrulli (strain AAC00-1)
GN=rpsB PE=3 SV=1
Length = 250
Score = 316 bits (809), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 182/218 (83%), Gaps = 1/218 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLTANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 68 MVGTKRQARELLAAEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LES 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L F R+ KL + IGGI++MN +PDAIFIIDVG+HK AV+EA KL IP+IGVVD
Sbjct: 127 MSKKEQLTFTREIEKLEKDIGGIQDMNALPDAIFIIDVGFHKIAVAEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
+NHSP+GI+YVIPGNDDSAK++ALY +GI DA ++ +
Sbjct: 187 SNHSPEGIDYVIPGNDDSAKAVALYARGIADAIIEGRA 224
>sp|Q13XB6|RS2_BURXL 30S ribosomal protein S2 OS=Burkholderia xenovorans (strain LB400)
GN=rpsB PE=3 SV=1
Length = 250
Score = 315 bits (808), Expect = 7e-85, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 181/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 68 FVGTKRQSRDTIAEEAQRAGMPYVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETER 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VVD
Sbjct: 128 MSKKEALLFEREMAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 188 TNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|B2T5J4|RS2_BURPP 30S ribosomal protein S2 OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=rpsB PE=3 SV=1
Length = 250
Score = 315 bits (807), Expect = 1e-84, Method: Composition-based stats.
Identities = 145/217 (66%), Positives = 181/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL MY A++Y QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMYNDALKYARQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMPF++ RWLGG+LTNFKT+K SI+RLK+M+ + G +
Sbjct: 68 FVGTKRQSRDTIAEEAQRAGMPFVNARWLGGMLTNFKTLKVSIKRLKDMEAALEAGETER 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL IP+I VVD
Sbjct: 128 MSKKEALLFEREMAKLVKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+GI+YVIPGNDD++K++ALYT G+ DA ++ +
Sbjct: 188 TNHSPEGIDYVIPGNDDASKAVALYTAGVADAIVEGR 224
>sp|Q0BE15|RS2_BURCM 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=rpsB PE=3 SV=1
Length = 246
Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1YS74|RS2_BURA4 30S ribosomal protein S2 OS=Burkholderia ambifaria (strain MC40-6)
GN=rpsB PE=3 SV=1
Length = 246
Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMPF++ RWLGG++TNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPFVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q12A31|RS2_POLSJ 30S ribosomal protein S2 OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=rpsB PE=3 SV=1
Length = 250
Score = 313 bits (802), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 180/218 (82%), Gaps = 1/218 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ YIFGHRN+IHIINLEK+L M++ A+++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPYIFGHRNRIHIINLEKSLPMFQDAMKFAKQLSANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 68 MVGTKRQAREIVATEAKRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LDS 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L F R+ KL + IGGI++MN +PDAIF+IDVG+HK A+ EA KL IP+IGVVD
Sbjct: 127 ISKKEQLTFKREIEKLEKDIGGIQDMNALPDAIFVIDVGFHKIAILEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
+NHSP GI+YVIPGNDDS+K++ALY +GI DA L+ +
Sbjct: 187 SNHSPIGIDYVIPGNDDSSKAVALYARGIADAILEGRA 224
>sp|B4ECN1|RS2_BURCJ 30S ribosomal protein S2 OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q39F43|RS2_BURS3 30S ribosomal protein S2 OS=Burkholderia sp. (strain 383) GN=rpsB
PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A0K8E3|RS2_BURCH 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain
HI2424) GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|B1JUF0|RS2_BURCC 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain MC0-3)
GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q1BHI2|RS2_BURCA 30S ribosomal protein S2 OS=Burkholderia cenocepacia (strain AU
1054) GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (802), Expect = 4e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + +G K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVESGETEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|Q2SWZ8|RS2_BURTA 30S ribosomal protein S2 OS=Burkholderia thailandensis (strain E264
/ ATCC 700388 / DSM 13276 / CIP 106301) GN=rpsB PE=3
SV=2
Length = 246
Score = 313 bits (801), Expect = 5e-84, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 182/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFNDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G + K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF++DVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVVDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAEGVADAILEGR 224
>sp|A4JF75|RS2_BURVG 30S ribosomal protein S2 OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=rpsB PE=3 SV=1
Length = 246
Score = 313 bits (801), Expect = 5e-84, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 181/217 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEKTL M+ A +Y+ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFTDAQKYVRQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R IA EA RAGMP+++ RWLGG++TNFKT+K SI+RLK+M+ + G K
Sbjct: 68 FVGTKRQSRDTIAQEAQRAGMPYVNARWLGGMMTNFKTLKVSIKRLKDMEAAVEAGETEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKEALLF R+ KL + IGG+K+M IPDAIF+IDVGYHK AV+EA KL +P+I VVD
Sbjct: 128 MSKKEALLFEREIAKLQKSIGGVKDMGGIPDAIFVIDVGYHKIAVTEANKLGVPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP+G++YVIPGNDDS+K++ALY +G+ DA L+ +
Sbjct: 188 TNHSPEGVDYVIPGNDDSSKAVALYAQGVADAILEGR 224
>sp|Q21WY9|RS2_RHOFD 30S ribosomal protein S2 OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=rpsB PE=3 SV=1
Length = 250
Score = 312 bits (799), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 181/218 (83%), Gaps = 1/218 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ Q+ +GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAAKFASQVSARRGTVL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M + G +
Sbjct: 68 MVGTKRQARETVALEAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKIQQEAG-LDS 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKE L+F R+ KL R IGGI++M ++PDAIF+IDVG+HK A++EA KL IP+I VVD
Sbjct: 127 LSKKEQLMFARELAKLERDIGGIQDMTVLPDAIFVIDVGFHKIAIAEAKKLGIPLIAVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+GI+Y+IPGNDDS+K++ LY +GI DA ++ ++
Sbjct: 187 TNHSPEGIDYIIPGNDDSSKAVILYARGIADAIIEGRS 224
>sp|Q47F92|RS2_DECAR 30S ribosomal protein S2 OS=Dechloromonas aromatica (strain RCB)
GN=rpsB PE=3 SV=1
Length = 248
Score = 311 bits (798), Expect = 9e-84, Method: Composition-based stats.
Identities = 143/218 (65%), Positives = 181/218 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFW+PKM+ YIFG RNKIHI+NLEKTL Y +A+ ++ +L S+GT+L
Sbjct: 8 MLEAGVHFGHQTRFWSPKMAPYIFGARNKIHIVNLEKTLAKYNEAMAFVKKLASSRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR +I EA+RAG PF+DQRWLGG+LTNFKT+KTSI+RLK+M++ + G + K
Sbjct: 68 FVGTKRQAREIIGEEALRAGAPFVDQRWLGGMLTNFKTVKTSIKRLKDMEVAVEAGELEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+ KKEAL F R+ KL + IGGIK M +PDAIF+IDVGYHK A++EA KL IP+IGVVD
Sbjct: 128 MPKKEALTFRRELEKLQKSIGGIKEMAGLPDAIFVIDVGYHKIAITEAEKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSPDG+ YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 188 TNHSPDGVAYVIPGNDDSSRAIQLYARGVADAILEGRS 225
>sp|C5CKS0|RS2_VARPS 30S ribosomal protein S2 OS=Variovorax paradoxus (strain S110)
GN=rpsB PE=3 SV=1
Length = 250
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 141/217 (64%), Positives = 179/217 (82%), Gaps = 1/217 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A++Y QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAMKYAKQLTANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A EA RAG+PF+D RWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 68 MVGTKRQAREIVAAEARRAGVPFVDTRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LDS 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK AV+EA KL IP+IGVVD
Sbjct: 127 LSKKEQLTFTREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAVAEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
+NHSP+GI+YVIPGNDDS+K++ LY +GI DA ++ +
Sbjct: 187 SNHSPEGIDYVIPGNDDSSKAVTLYARGIADAIIEGR 223
>sp|Q5NZH5|RS2_AROAE 30S ribosomal protein S2 OS=Aromatoleum aromaticum (strain EbN1)
GN=rpsB PE=3 SV=1
Length = 251
Score = 310 bits (795), Expect = 2e-83, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ Y+ +L ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMGKYNEAMNYVRKLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR +++ EA RAGMPF+D+RWLGG+LTNFKT+K SI+RLKEM+ + +GSI +
Sbjct: 68 LVGTKRQAREIVSEEASRAGMPFVDERWLGGMLTNFKTVKQSIKRLKEMEAMVEDGSIER 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKEAL+ R+ KL + IGGIK+M +PDA+F+IDVGYHK A++EA KL IPI+ VVD
Sbjct: 128 LSKKEALMATREMDKLKKSIGGIKDMGGLPDAMFVIDVGYHKIAITEAQKLGIPIVAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+GI+YVIPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 188 TNHSPEGIDYVIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|A4SYV1|RS2_POLSQ 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=rpsB PE=3 SV=1
Length = 249
Score = 310 bits (793), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 177/218 (81%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+L
Sbjct: 8 MLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFAKQVASNRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M + G K
Sbjct: 68 FVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMAVAKEAGDWEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSKKEAL R KL + +GGI+++N +PDAIF++DVGYHK A++EA KL IP+I VVD
Sbjct: 128 LSKKEALTNDRDLDKLQKALGGIQDLNGVPDAIFVVDVGYHKIAITEANKLGIPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+G++Y+IPGNDDS+K++ LY +GI DA L+ K
Sbjct: 188 TNHSPEGVDYIIPGNDDSSKAVLLYARGIADAILEGKA 225
>sp|Q1H139|RS2_METFK 30S ribosomal protein S2 OS=Methylobacillus flagellatus (strain KT
/ ATCC 51484 / DSM 6875) GN=rpsB PE=3 SV=1
Length = 249
Score = 309 bits (792), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 140/217 (64%), Positives = 174/217 (80%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTR+WNPKM+ YIFG RNKIHIINLEKTL ++E A++Y+ QL +KG +L
Sbjct: 8 MLEAGVHFGHQTRYWNPKMAPYIFGERNKIHIINLEKTLPLFEDALKYVRQLSANKGRIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR +I EA RAG P+++ RWLGG+LTNFKT+K SI+RL E + + +G I K
Sbjct: 68 FVGTKRQARDIIKEEAQRAGCPYVNHRWLGGMLTNFKTVKQSIKRLTEYEALLQDGGIEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
KKEAL + R+ KL R IGGIK M +PDAIFIIDVG+ GAV+EA KL IP+IGVVD
Sbjct: 128 FGKKEALGYKREVEKLERSIGGIKEMGGLPDAIFIIDVGHESGAVTEAAKLGIPVIGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TN+SP+G+ YVIPGNDDS+++I LY +GI DA L+ +
Sbjct: 188 TNNSPEGVAYVIPGNDDSSRAIRLYARGIADAVLEGR 224
>sp|Q7VYD0|RS2_BORPE 30S ribosomal protein S2 OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=rpsB PE=3 SV=1
Length = 249
Score = 308 bits (789), Expect = 1e-82, Method: Composition-based stats.
Identities = 139/217 (64%), Positives = 180/217 (82%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNIL 66
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G +
Sbjct: 67 FVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFER 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VVD
Sbjct: 127 MTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 187 TNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WA60|RS2_BORPA 30S ribosomal protein S2 OS=Bordetella parapertussis (strain 12822
/ ATCC BAA-587 / NCTC 13253) GN=rpsB PE=3 SV=1
Length = 249
Score = 308 bits (789), Expect = 1e-82, Method: Composition-based stats.
Identities = 139/217 (64%), Positives = 180/217 (82%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNIL 66
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G +
Sbjct: 67 FVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFER 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VVD
Sbjct: 127 MTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 187 TNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|Q7WJ94|RS2_BORBR 30S ribosomal protein S2 OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=rpsB PE=3 SV=1
Length = 249
Score = 308 bits (789), Expect = 1e-82, Method: Composition-based stats.
Identities = 139/217 (64%), Positives = 180/217 (82%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTR+WNPKM+ YIFGHRNKIHIINLE+T+ Y++A +++ QL G +L
Sbjct: 7 MLEAGVHFGHQTRYWNPKMAPYIFGHRNKIHIINLEQTVAKYQEASKFVKQLVARGGNIL 66
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR AR ++A EA R GMP++D RWLGG+LTNFKT+K+SI+RLK+M+ + +G +
Sbjct: 67 FVGTKRAARELVATEAARCGMPYVDARWLGGMLTNFKTVKSSIKRLKDMEAMVADGGFER 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
++KKE LLF R+ KLN+ IGGIK+MN +PDA+F+IDVGYHK AV+EA L IP++ VVD
Sbjct: 127 MTKKEGLLFQRELDKLNKSIGGIKDMNGLPDALFVIDVGYHKIAVAEAKVLGIPVVAVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSPDGI++VIPGNDDSA++IALY KG+ DA L+ +
Sbjct: 187 TNHSPDGIDHVIPGNDDSARAIALYAKGMADAVLEGR 223
>sp|B1XTU3|RS2_POLNS 30S ribosomal protein S2 OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=rpsB PE=3 SV=1
Length = 249
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 137/218 (62%), Positives = 177/218 (81%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAG HFGHQTRFW+PKM+ +IFGHRNKIHIINLEKTL M++ A+++ Q+ ++GT+L
Sbjct: 8 MLEAGCHFGHQTRFWSPKMAPFIFGHRNKIHIINLEKTLPMFQDALKFTKQVAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQ+R +IA EA RAGMP+ID RWLGG LTNFKT+K S++RLK+M++ G K
Sbjct: 68 FVGTKRQSREIIAEEAARAGMPYIDSRWLGGTLTNFKTVKGSLKRLKDMEVAKEAGDWEK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LS+KEAL R KL + +GGIK++N IPDAIF++DVGYHK A++EA KL IP+I VVD
Sbjct: 128 LSRKEALTNDRDLDKLQKALGGIKDLNGIPDAIFVVDVGYHKIAITEANKLGIPVIAVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+G++Y+IPGNDDS+K++ LY GI +A L+ K
Sbjct: 188 TNHSPEGVDYIIPGNDDSSKAVILYAHGIANAILEGKA 225
>sp|A1K6S1|RS2_AZOSB 30S ribosomal protein S2 OS=Azoarcus sp. (strain BH72) GN=rpsB PE=3
SV=1
Length = 251
Score = 308 bits (788), Expect = 2e-82, Method: Composition-based stats.
Identities = 140/218 (64%), Positives = 183/218 (83%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNP+M+ YIFG RNKIHI+NLEKT+ Y +A+ ++ +L ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPRMAPYIFGQRNKIHIVNLEKTMVKYNEAMNFVRKLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FV TKRQAR ++A EA RAGMP++D+RWLGG+LTNFKT+K SI+RLKE++ I +GSI +
Sbjct: 68 FVSTKRQAREILAEEARRAGMPYVDERWLGGMLTNFKTVKQSIKRLKEVEAMIEDGSIER 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
LSK+EAL R+ KL + IGGIK+M +PDAIFIIDVGYHK AV+EA KL IP++GVVD
Sbjct: 128 LSKREALTVTRELEKLQKSIGGIKDMGGLPDAIFIIDVGYHKIAVTEAQKLGIPVVGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP+GI+Y+IPGNDDS+++I LY +G+ DA L+ ++
Sbjct: 188 TNHSPEGIDYIIPGNDDSSRAIRLYARGVADAVLEGRS 225
>sp|A1VN40|RS2_POLNA 30S ribosomal protein S2 OS=Polaromonas naphthalenivorans (strain
CJ2) GN=rpsB PE=3 SV=1
Length = 250
Score = 306 bits (784), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 178/218 (81%), Gaps = 1/218 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFW+PKM+ YIFGHRN+IHIINLEK+L M+++A+++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWDPKMAPYIFGHRNRIHIINLEKSLPMFQEAMKFAKQLTANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKR AR +A EA RAG+P++DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 68 MVGTKRTARETVAAEAQRAGIPYVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LDS 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L F R+ KL + IGGI++M +PDAIF+IDVG+HK A+ EA KL IP+IGVVD
Sbjct: 127 ISKKEQLTFKREIEKLEKDIGGIQDMTALPDAIFVIDVGFHKIAILEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TNHSP GI+YVIPGNDDS+K++ALY +GI DA ++ +
Sbjct: 187 TNHSPLGIDYVIPGNDDSSKAVALYARGIADAVIEGRA 224
>sp|B9MGL7|RS2_ACIET 30S ribosomal protein S2 OS=Acidovorax ebreus (strain TPSY) GN=rpsB
PE=3 SV=1
Length = 250
Score = 305 bits (781), Expect = 9e-82, Method: Composition-based stats.
Identities = 144/217 (66%), Positives = 182/217 (83%), Gaps = 1/217 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 68 MVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LES 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVVD
Sbjct: 127 MSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
+NHSP+GI+YVIPGNDDSAK++ALY +GI DA LD +
Sbjct: 187 SNHSPEGIDYVIPGNDDSAKAVALYARGIADAILDGR 223
>sp|A1W918|RS2_ACISJ 30S ribosomal protein S2 OS=Acidovorax sp. (strain JS42) GN=rpsB
PE=3 SV=1
Length = 250
Score = 303 bits (776), Expect = 4e-81, Method: Composition-based stats.
Identities = 143/217 (65%), Positives = 182/217 (83%), Gaps = 1/217 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M+++A ++ QL ++GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQEAQKFAKQLAANRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A +A RAG+P++DQRWLGG+LTNFKT+KTSI+RLK+M G +
Sbjct: 68 MVGTKRQARELVAEQAQRAGVPYVDQRWLGGMLTNFKTVKTSIKRLKDMKAQQEAG-LES 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L+F R+ KL + IGGI++M +PDAIF+IDVGYHK AVSEA KL IP+IGVVD
Sbjct: 127 MSKKEQLMFSRELEKLEKDIGGIQDMAALPDAIFVIDVGYHKIAVSEAKKLGIPLIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
+NHSP+GI+YVIPGNDDSAK++ALY +GI DA L+ +
Sbjct: 187 SNHSPEGIDYVIPGNDDSAKAVALYARGIADAILEGR 223
>sp|A9BMN2|RS2_DELAS 30S ribosomal protein S2 OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=rpsB PE=3 SV=1
Length = 250
Score = 302 bits (774), Expect = 7e-81, Method: Composition-based stats.
Identities = 142/217 (65%), Positives = 181/217 (83%), Gaps = 1/217 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ +IFGHRNKIHIINLEK+L M++ A +++ QL + GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKSLPMFQDAQKFVKQLASNGGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTKRQAR ++A EA RAG+PF+DQRWLGG+LTNFKT+KTSI+RLKEM G +
Sbjct: 68 MVGTKRQAREMVAAEAQRAGVPFVDQRWLGGMLTNFKTVKTSIKRLKEMKAQQEAG-LEA 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+SKKE L+F R+ KL + IGGI++MN +PDAIF+IDVG+HK AV+EA KL IP++GVVD
Sbjct: 127 MSKKEQLMFVRELEKLEKDIGGIQDMNSLPDAIFVIDVGFHKIAVAEAKKLGIPLVGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
+NH+P+GI+YVIPGNDDSAK++ LY +GI DA L+ +
Sbjct: 187 SNHNPEGIDYVIPGNDDSAKAVQLYAQGIADAILEGR 223
>sp|Q0AEH4|RS2_NITEC 30S ribosomal protein S2 OS=Nitrosomonas eutropha (strain C91)
GN=rpsB PE=3 SV=1
Length = 251
Score = 301 bits (772), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 172/217 (79%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ YIFG RNKIHI+NLE TL M+ A+ Y +L +K T+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPYIFGQRNKIHIVNLEHTLVMFRDALDYARRLAANKETIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR ++ EA+R G P+++QRWLGG+LTNFKTI+ SI+RL++M+ + +G++ K
Sbjct: 68 FVGTKRQARDIVKEEAIRCGAPYVNQRWLGGMLTNFKTIRQSIKRLQDMEKMVQDGTLNK 127
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L KKEAL F R+ KLN +GGIK M +PDA+F+IDVGY KG + EA KL IP++GVVD
Sbjct: 128 LVKKEALDFQRELEKLNASLGGIKEMKGLPDAMFVIDVGYQKGTIIEANKLGIPVVGVVD 187
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNH+P GI YVIPGNDDS+++I LY + + DA L+ +
Sbjct: 188 TNHNPAGIQYVIPGNDDSSQAIRLYARAMADAILEGR 224
>sp|B1XXJ5|RS2_LEPCP 30S ribosomal protein S2 OS=Leptothrix cholodnii (strain ATCC 51168
/ LMG 8142 / SP-6) GN=rpsB PE=3 SV=1
Length = 248
Score = 301 bits (770), Expect = 2e-80, Method: Composition-based stats.
Identities = 141/217 (64%), Positives = 179/217 (82%), Gaps = 1/217 (0%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
MLEAGVHFGHQTRFWNPKM+ YIFGHRNKIHIINLEKT+ ++ +A +Y QL +GT+L
Sbjct: 8 MLEAGVHFGHQTRFWNPKMAPYIFGHRNKIHIINLEKTVPLFNEATKYARQLAGKRGTIL 67
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQAR V+A EA RAGMPF++ RWLGG+LTNFKT+K S+++LKEM + G+ +
Sbjct: 68 FVGTKRQARDVVAMEAARAGMPFVETRWLGGMLTNFKTVKGSLKKLKEMQAQVEAGT-QP 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
KKEAL+F R+ KL + IGGI++MN +PDA+F+IDVG+HK A++EA KL IP+IGVVD
Sbjct: 127 AIKKEALMFQREIAKLEKDIGGIQDMNALPDALFVIDVGFHKIAIAEAKKLGIPVIGVVD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TNHSP GI+YVIPGNDDSAK++ALY + + DA ++ K
Sbjct: 187 TNHSPVGIDYVIPGNDDSAKAVALYARVMADAIIEGK 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 282,961,544
Number of Sequences: 539616
Number of extensions: 11898337
Number of successful extensions: 49299
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3132
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 43246
Number of HSP's gapped (non-prelim): 3906
length of query: 837
length of database: 191,569,459
effective HSP length: 126
effective length of query: 711
effective length of database: 123,577,843
effective search space: 87863846373
effective search space used: 87863846373
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)