Your job contains 1 sequence.
>psy13351
MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL
FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK
LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD
TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA
NGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIYISEKVGSLVEINCETDFVAKNNEFI
KFSKKIAKLITENTPINLDQLNNLKIKNNLLTVDEKCKELISRIGENIKIRRFKLFKTNN
NLISYLHDNKIGVIVEYNGDNESAVKDVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLK
AQQLGEALMKGDAYNINSSIIKNIISEISEIVSCGIELAIVIGGGNICRGISNKIQNIDR
STADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVI
FAGGIGNPFFTTDTTAALRAAEIKAEIILKATKVDGIYNSDPNKCLSAIIYKKITFDEVI
SKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDIKKN
TKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQ
PFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISI
RKIRRDSNENLKKLLKNKILSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEILTL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13351
(837 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9KPV2 - symbol:rpsB "30S ribosomal protein S2"... 611 1.3e-59 1
TIGR_CMR|VC_2260 - symbol:VC_2260 "ribosomal protein S2" ... 611 1.3e-59 1
TIGR_CMR|CPS_1553 - symbol:CPS_1553 "ribosomal protein S2... 598 3.2e-58 1
TIGR_CMR|GSU_1921 - symbol:GSU_1921 "ribosomal protein S2... 597 4.0e-58 1
TIGR_CMR|SO_1629 - symbol:SO_1629 "ribosomal protein S2" ... 593 1.1e-57 1
UNIPROTKB|P0A7V0 - symbol:rpsB species:83333 "Escherichia... 591 1.7e-57 1
TIGR_CMR|CHY_1787 - symbol:CHY_1787 "ribosomal protein S2... 574 1.1e-55 1
TIGR_CMR|ECH_0514 - symbol:ECH_0514 "ribosomal protein S2... 566 7.8e-55 1
TIGR_CMR|BA_3965 - symbol:BA_3965 "ribosomal protein S2" ... 565 9.9e-55 1
TIGR_CMR|DET_0377 - symbol:DET_0377 "ribosomal protein S2... 522 6.4e-53 2
TIGR_CMR|SPO_1976 - symbol:SPO_1976 "ribosomal protein S2... 543 2.1e-52 1
UNIPROTKB|P66537 - symbol:rpsB "30S ribosomal protein S2"... 537 1.1e-51 1
TIGR_CMR|CJE_1316 - symbol:CJE_1316 "ribosomal protein S2... 536 1.4e-51 1
TIGR_CMR|APH_0397 - symbol:APH_0397 "ribosomal protein S2... 513 6.8e-49 1
TIGR_CMR|NSE_0948 - symbol:NSE_0948 "ribosomal protein S2... 472 2.7e-44 1
TIGR_CMR|GSU_1919 - symbol:GSU_1919 "uridylate kinase" sp... 457 1.2e-42 1
TIGR_CMR|CHY_1785 - symbol:CHY_1785 "uridylate kinase" sp... 441 6.9e-41 1
TIGR_CMR|DET_0375 - symbol:DET_0375 "uridylate kinase" sp... 421 1.1e-38 1
TIGR_CMR|CPS_1555 - symbol:CPS_1555 "uridylate kinase" sp... 406 4.5e-37 1
TIGR_CMR|VC_2258 - symbol:VC_2258 "uridylate kinase" spec... 405 5.8e-37 1
UNIPROTKB|P0A7E9 - symbol:pyrH "PyrH" species:83333 "Esch... 404 7.5e-37 1
TIGR_CMR|BA_3963 - symbol:BA_3963 "uridylate kinase" spec... 403 9.6e-37 1
TIGR_CMR|CBU_1384 - symbol:CBU_1384 "uridylate kinase" sp... 398 3.4e-36 1
TIGR_CMR|SPO_1662 - symbol:SPO_1662 "uridylate kinase" sp... 398 3.4e-36 1
UNIPROTKB|P65929 - symbol:pyrH "Uridylate kinase" species... 392 1.5e-35 1
TIGR_CMR|NSE_0946 - symbol:NSE_0946 "uridylate kinase" sp... 392 1.5e-35 1
TIGR_CMR|APH_0111 - symbol:APH_0111 "uridylate kinase" sp... 387 5.2e-35 1
TIGR_CMR|SO_1631 - symbol:SO_1631 "uridylate kinase" spec... 386 6.7e-35 1
TAIR|locus:2093949 - symbol:AT3G18680 species:3702 "Arabi... 379 3.9e-34 1
TIGR_CMR|ECH_0266 - symbol:ECH_0266 "uridylate kinase" sp... 374 1.3e-33 1
UNIPROTKB|P0C480 - symbol:rps2 "30S ribosomal protein S2,... 372 2.2e-33 1
UNIPROTKB|P0C481 - symbol:rps2 "30S ribosomal protein S2,... 372 2.2e-33 1
UNIPROTKB|P0C482 - symbol:rps2 "30S ribosomal protein S2,... 372 2.2e-33 1
TIGR_CMR|CJE_1410 - symbol:CJE_1410 "uridylate kinase" sp... 372 2.2e-33 1
UNIPROTKB|Q6ENI1 - symbol:rps2 "30S ribosomal protein S2,... 369 4.7e-33 1
TIGR_CMR|CPS_1556 - symbol:CPS_1556 "ribosome recycling f... 364 1.6e-32 1
TIGR_CMR|VC_2257 - symbol:VC_2257 "ribosome recycling fac... 362 2.7e-32 1
UNIPROTKB|P0A805 - symbol:frr "ribosome recycling factor"... 358 7.2e-32 1
TIGR_CMR|GSU_1918 - symbol:GSU_1918 "ribosome recycling f... 356 1.2e-31 1
TIGR_CMR|CBU_1383 - symbol:CBU_1383 "ribosome recycling f... 349 6.7e-31 1
TIGR_CMR|CBU_1385 - symbol:CBU_1385 "translation elongati... 341 4.9e-30 1
TIGR_CMR|BA_3962 - symbol:BA_3962 "ribosome recycling fac... 334 2.8e-29 1
TIGR_CMR|CHY_1784 - symbol:CHY_1784 "ribosome recycling f... 334 2.8e-29 1
TIGR_CMR|BA_1797 - symbol:BA_1797 "uridylate kinase" spec... 330 7.6e-29 1
TAIR|locus:2077254 - symbol:RRF ""ribosome recycling fact... 321 7.1e-28 1
TIGR_CMR|CJE_0285 - symbol:CJE_0285 "ribosome recycling f... 311 8.4e-27 1
TIGR_CMR|CPS_1554 - symbol:CPS_1554 "translation elongati... 309 1.4e-26 1
TIGR_CMR|BA_3964 - symbol:BA_3964 "translation elongation... 308 1.8e-26 1
TIGR_CMR|SO_1632 - symbol:SO_1632 "ribosome recycling fac... 308 1.8e-26 1
UNIPROTKB|P0A6P1 - symbol:tsf species:83333 "Escherichia ... 306 2.9e-26 1
TIGR_CMR|DET_0374 - symbol:DET_0374 "ribosome recycling f... 306 2.9e-26 1
UNIPROTKB|P66734 - symbol:frr "Ribosome-recycling factor"... 304 4.8e-26 1
UNIPROTKB|Q9KPV3 - symbol:tsf "Elongation factor Ts" spec... 304 4.8e-26 1
TIGR_CMR|VC_2259 - symbol:VC_2259 "elongation factor Ts" ... 304 4.8e-26 1
UNIPROTKB|Q10788 - symbol:tsf "Elongation factor Ts" spec... 290 1.5e-24 1
TIGR_CMR|CJE_1315 - symbol:CJE_1315 "translation elongati... 288 2.5e-24 1
TIGR_CMR|SPO_1975 - symbol:SPO_1975 "translation elongati... 283 8.7e-24 1
POMBASE|SPAC24C9.10c - symbol:mrp4 "mitochondrial ribosom... 195 2.2e-23 2
TIGR_CMR|SO_1630 - symbol:SO_1630 "translation elongation... 273 1.0e-22 1
TIGR_CMR|APH_0112 - symbol:APH_0112 "ribosome recycling f... 266 5.8e-22 1
TIGR_CMR|NSE_0945 - symbol:NSE_0945 "ribosome recycling f... 265 7.5e-22 1
TIGR_CMR|ECH_0267 - symbol:ECH_0267 "ribosome recycling f... 262 1.6e-21 1
TIGR_CMR|ECH_0515 - symbol:ECH_0515 "translation elongati... 258 4.2e-21 1
TIGR_CMR|SPO_1664 - symbol:SPO_1664 "ribosome recycling f... 257 5.4e-21 1
TIGR_CMR|CHY_1786 - symbol:CHY_1786 "translation elongati... 207 4.5e-20 2
TAIR|locus:2082309 - symbol:AT3G01800 species:3702 "Arabi... 233 2.0e-18 1
TIGR_CMR|GSU_1920 - symbol:GSU_1920 "translation elongati... 194 2.9e-18 2
TAIR|locus:2100108 - symbol:AT3G10030 species:3702 "Arabi... 261 3.1e-18 2
ZFIN|ZDB-GENE-040704-12 - symbol:mrrf "mitochondrial ribo... 228 7.0e-18 1
TIGR_CMR|NSE_0947 - symbol:NSE_0947 "translation elongati... 225 1.5e-17 1
UNIPROTKB|Q0VCQ4 - symbol:MRRF "Ribosome-recycling factor... 222 3.1e-17 1
UNIPROTKB|Q96E11 - symbol:MRRF "Ribosome-recycling factor... 221 3.9e-17 1
UNIPROTKB|J9P265 - symbol:MRRF "Uncharacterized protein" ... 217 1.1e-16 1
TIGR_CMR|APH_0398 - symbol:APH_0398 "translation elongati... 215 1.7e-16 1
TIGR_CMR|DET_0376 - symbol:DET_0376 "translation elongati... 192 3.5e-16 2
MGI|MGI:1915121 - symbol:Mrrf "mitochondrial ribosome rec... 211 4.6e-16 1
DICTYBASE|DDB_G0268518 - symbol:DDB_G0268518 "Ribosome-re... 210 6.0e-16 1
UNIPROTKB|F1SLQ7 - symbol:LOC100515005 "Uncharacterized p... 208 9.8e-16 1
RGD|1305897 - symbol:Mrrf "mitochondrial ribosome recycli... 208 9.8e-16 1
ASPGD|ASPL0000014062 - symbol:AN4251 species:162425 "Emer... 163 4.0e-15 2
UNIPROTKB|E1BQ58 - symbol:MRRF "Uncharacterized protein" ... 201 5.5e-15 1
TAIR|locus:2136158 - symbol:AT4G11120 species:3702 "Arabi... 159 6.4e-15 2
UNIPROTKB|F1PHF1 - symbol:MRPS2 "Uncharacterized protein"... 145 1.8e-14 2
UNIPROTKB|G4NGF2 - symbol:MGG_04331 "37S ribosomal protei... 160 7.2e-14 2
UNIPROTKB|P82923 - symbol:MRPS2 "28S ribosomal protein S2... 132 1.8e-13 2
FB|FBgn0035980 - symbol:CG4447 species:7227 "Drosophila m... 181 6.1e-12 1
TAIR|locus:2119946 - symbol:emb2726 "embryo defective 272... 172 7.6e-12 2
SGD|S000000996 - symbol:MRP4 "Mitochondrial ribosomal pro... 186 3.1e-11 1
FB|FBgn0032646 - symbol:CG6412 species:7227 "Drosophila m... 177 1.6e-10 1
UNIPROTKB|Q4TT42 - symbol:MRRFP1 "Protein MRRFP1" species... 163 2.6e-09 1
DICTYBASE|DDB_G0286399 - symbol:tsfm "elongation factor T... 137 4.3e-08 2
CGD|CAL0001448 - symbol:orf19.5747 species:5476 "Candida ... 165 4.5e-08 2
ZFIN|ZDB-GENE-061215-17 - symbol:tsfm "Ts translation elo... 152 1.0e-07 1
ZFIN|ZDB-GENE-070112-992 - symbol:mrps2 "mitochondrial ri... 150 1.3e-07 1
UNIPROTKB|C9JG32 - symbol:TSFM "Elongation factor Ts" spe... 130 2.2e-07 1
UNIPROTKB|C9JT21 - symbol:TSFM "Elongation factor Ts" spe... 130 2.2e-07 1
UNIPROTKB|I3LF68 - symbol:TSFM "Elongation factor Ts, mit... 127 4.6e-07 1
UNIPROTKB|Q5T8A0 - symbol:MRPS2 "28S ribosomal protein S2... 144 5.1e-07 1
RGD|1309116 - symbol:Mrps2 "mitochondrial ribosomal prote... 144 6.6e-07 1
UNIPROTKB|Q9Y399 - symbol:MRPS2 "28S ribosomal protein S2... 144 7.0e-07 1
WARNING: Descriptions of 20 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q9KPV2 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 116/240 (48%), Positives = 169/240 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
ML AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 240
TN SPDG++Y+IPGNDD+ +++ LY A+ + E R+K +A + E K +EA
Sbjct: 189 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGRNKDVAAVAE-KDGFVEA 241
>TIGR_CMR|VC_2260 [details] [associations]
symbol:VC_2260 "ribosomal protein S2" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
ProtClustDB:PRK05299 OMA:SYIDRAY PIR:C82097 RefSeq:NP_231891.1
ProteinModelPortal:Q9KPV2 SMR:Q9KPV2 PRIDE:Q9KPV2 DNASU:2613182
GeneID:2613182 KEGG:vch:VC2260 PATRIC:20083563 Uniprot:Q9KPV2
Length = 242
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 116/240 (48%), Positives = 169/240 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
ML AGVHFGHQTR+WNPKM +IFG RN++HIINLEKT+ M+ +A+ + ++G KG +L
Sbjct: 9 MLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKKGKVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR A + A+ + +++ RWLGG+LTN+KT++ SI+RLKE+++ T+G+ K
Sbjct: 69 FVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDGTFDK 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ R+ KL + +GGIK+M +PDA+F+ID + A+ EA L IP+ VVD
Sbjct: 129 LTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAVVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 240
TN SPDG++Y+IPGNDD+ +++ LY A+ + E R+K +A + E K +EA
Sbjct: 189 TNSSPDGVDYIIPGNDDAIRAVQLYLNAA------AQAINEGRNKDVAAVAE-KDGFVEA 241
>TIGR_CMR|CPS_1553 [details] [associations]
symbol:CPS_1553 "ribosomal protein S2" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:SYIDRAY HSSP:P80371 RefSeq:YP_268295.1
ProteinModelPortal:Q485H0 SMR:Q485H0 STRING:Q485H0 GeneID:3522975
KEGG:cps:CPS_1553 PATRIC:21466313
BioCyc:CPSY167879:GI48-1634-MONOMER Uniprot:Q485H0
Length = 242
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 105/217 (48%), Positives = 160/217 (73%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
ML+AGVHFGH+TR+WNPKM +IFG R+K+HIINLE+T+ M+ +A+ ++ + KG +L
Sbjct: 9 MLKAGVHFGHKTRYWNPKMKQFIFGARDKVHIINLEQTVPMFNEALAFVNNVSSKKGKVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR A I + A+++ +++ RWLGG+LTN+KT++ SI+RLK+++ T+G+
Sbjct: 69 FVGTKRAASDAIKDAAIKSDQFYVNHRWLGGMLTNWKTVRQSIKRLKDLESQSTDGTFEA 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ R+ KL++ +GGIKNM +PD +FIID + A+ EA L IP+I VVD
Sbjct: 129 LTKKEALMRTREMEKLDKSLGGIKNMGGLPDVLFIIDADHEHIAIKEANNLGIPVISVVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TN +PDG++YV+PGNDD+ +++ LY + ++ L +
Sbjct: 189 TNSNPDGVDYVVPGNDDAIRAVTLYCDAVANSVLSGR 225
>TIGR_CMR|GSU_1921 [details] [associations]
symbol:GSU_1921 "ribosomal protein S2" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 GO:GO:0006412 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:NP_952970.1 ProteinModelPortal:Q74BW1 SMR:Q74BW1
GeneID:2685346 KEGG:gsu:GSU1921 PATRIC:22026707
BioCyc:GSUL243231:GH27-1978-MONOMER Uniprot:Q74BW1
Length = 251
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 113/215 (52%), Positives = 155/215 (72%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LEAGVHFGHQT+ WNPKM YIFG RN I+II+L+KT+ +++ A ++ + + T+L
Sbjct: 9 LLEAGVHFGHQTKRWNPKMKPYIFGARNGIYIIDLQKTVRLFKNAYNFVRENAQAGETML 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA+ I EAVR GM F++QRWLGG+LTNF T+K SI RLK +D +GSI
Sbjct: 69 FVGTKKQAQDAIGEEAVRCGMYFVNQRWLGGMLTNFVTVKQSIDRLKRLDAMFADGSIEA 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+KKEAL +++ KL +++GGIK M +P A+F+ID A+SEA KL IP++ VVD
Sbjct: 129 YTKKEALQLEKEREKLEKILGGIKGMGKLPGALFVIDPKNETIAISEAKKLGIPVVAVVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLD 215
TN PD I+YVIPGNDD+ ++I L T + DA ++
Sbjct: 189 TNCDPDPIDYVIPGNDDAIRAIRLLTSKMADAVIE 223
>TIGR_CMR|SO_1629 [details] [associations]
symbol:SO_1629 "ribosomal protein S2" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:NP_717240.1 ProteinModelPortal:Q8EGH5 SMR:Q8EGH5
PRIDE:Q8EGH5 GeneID:1169423 KEGG:son:SO_1629 PATRIC:23522892
Uniprot:Q8EGH5
Length = 242
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 108/212 (50%), Positives = 151/212 (71%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
ML+AGVHFGHQTR+WNPKM +IFG RN +HIINLE T+ M+ +A+ +I + KG +L
Sbjct: 9 MLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR A I A+ ++D RWLGG+LTN+KT++ SI+RLKE++ +G+ K
Sbjct: 69 FVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDK 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ R+ KL + +GGIKNM +PD +F+I + A+ EA L IP++ VVD
Sbjct: 129 LTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 212
TN +PDG+NY++PGNDD+ ++I LYT + A
Sbjct: 189 TNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAA 220
>UNIPROTKB|P0A7V0 [details] [associations]
symbol:rpsB species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA;IPI]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0008270 EMBL:U70214
GO:GO:0003735 PDB:3J00 PDBsum:3J00 EMBL:V00343 PDB:3FIH PDB:3IZV
PDB:3IZW PDBsum:3FIH PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967
OMA:NVAGGTD PDB:4GAS PDB:4GD1 PDBsum:4GAS PDBsum:4GD1 PDB:1M5G
PDB:1P87 PDB:1VS5 PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB
PDB:2I2P PDB:2I2U PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD
PDB:2QBF PDB:2QBH PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0
PDB:2VHO PDB:2VHP PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1
PDB:3DF3 PDB:3E1A PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S
PDB:3I1Z PDB:3I21 PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10
PDB:3J13 PDB:3J18 PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB
PDB:3OFO PDB:3OFP PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I
PDB:4ADV PDB:4GAQ PDB:4GD2 PDBsum:1M5G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 ProtClustDB:PRK05299 PIR:A02696
RefSeq:NP_414711.1 RefSeq:YP_488471.1 ProteinModelPortal:P0A7V0
SMR:P0A7V0 IntAct:P0A7V0 SWISS-2DPAGE:P0A7V0 PaxDb:P0A7V0
PRIDE:P0A7V0 EnsemblBacteria:EBESCT00000000658
EnsemblBacteria:EBESCT00000016914 GeneID:12931818 GeneID:947874
KEGG:ecj:Y75_p0165 KEGG:eco:b0169 PATRIC:32115445 EchoBASE:EB0894
EcoGene:EG10901 BioCyc:EcoCyc:EG10901-MONOMER
BioCyc:ECOL316407:JW0164-MONOMER ChEMBL:CHEMBL1922
EvolutionaryTrace:P0A7V0 Genevestigator:P0A7V0 Uniprot:P0A7V0
Length = 241
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 116/240 (48%), Positives = 168/240 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
ML+AGVHFGHQTR+WNPKM +IFG RNK+HIINLEKT+ M+ +A+ + ++ KG +L
Sbjct: 9 MLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKIL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKR A + + A+ F++ RWLGG+LTN+KT++ SI+RLK+++ +G+ K
Sbjct: 69 FVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDK 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ R+ KL +GGIK+M +PDA+F+ID + A+ EA L IP+ +VD
Sbjct: 129 LTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEA 240
TN PDG+++VIPGNDD+ +++ LY G V A TV E RS+ LA + +++ +EA
Sbjct: 189 TNSDPDGVDFVIPGNDDAIRAVTLYL-GAV-----AATVREGRSQDLAS--QAEESFVEA 240
>TIGR_CMR|CHY_1787 [details] [associations]
symbol:CHY_1787 "ribosomal protein S2" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967
OMA:SYIDRAY HSSP:P80371 RefSeq:YP_360607.1
ProteinModelPortal:Q3AB77 SMR:Q3AB77 STRING:Q3AB77 GeneID:3726905
KEGG:chy:CHY_1787 PATRIC:21276685
BioCyc:CHYD246194:GJCN-1786-MONOMER Uniprot:Q3AB77
Length = 232
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 110/221 (49%), Positives = 155/221 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LEAGVHFGHQTR WNPKM+ YIF RN I+II+L+KT E+A ++ +L GT+L
Sbjct: 9 LLEAGVHFGHQTRRWNPKMAEYIFTDRNGIYIIDLQKTAKKLEEAYSFVRELSAQGGTIL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA+ I EA R GM +++QRWLGG LTNFKTI+ ++RL E++ G++
Sbjct: 69 FVGTKKQAQDAIKEEAERCGMFYVNQRWLGGTLTNFKTIRKRVERLIEIEKMEQEGALSV 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L KKE +++ KL+R + GIK M +PDA+F++D K AV+EA KL+IP++ +VD
Sbjct: 129 LPKKEVAKILKEKEKLSRFLSGIKEMKKLPDALFVVDPRKEKIAVAEARKLDIPVVAIVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 221
TN PD ++YVIPGNDD+ +++ L T I DA ++ + GE
Sbjct: 189 TNCDPDEVDYVIPGNDDAIRAVKLITSKIADAVIEGRQ-GE 228
>TIGR_CMR|ECH_0514 [details] [associations]
symbol:ECH_0514 "ribosomal protein S2" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_507329.1 ProteinModelPortal:Q2GGV4 SMR:Q2GGV4
STRING:Q2GGV4 GeneID:3927057 KEGG:ech:ECH_0514 PATRIC:20576496
BioCyc:ECHA205920:GJNR-516-MONOMER Uniprot:Q2GGV4
Length = 288
Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
Identities = 108/216 (50%), Positives = 152/216 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
++E+GVHFGH+ WNPKM+ YI+G N IHIINL+ T+ + + A++ +Y + +G +L
Sbjct: 12 LVESGVHFGHKASRWNPKMAPYIYGVHNDIHIINLQNTVVLLKNALKALYDIVLKRGRVL 71
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
F+GTK QA +IA+EAVR G +I+ RWLGG+LTN++TI SI++LKE + I N +
Sbjct: 72 FIGTKVQASAIIADEAVRCGQYYINNRWLGGMLTNWETISLSIKKLKEYEKLIENVD-NQ 130
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+KKE LLF +K+ KL+R IGGI NM +P A+F+ID A+ EA KLNIP+I V+D
Sbjct: 131 FTKKELLLFEKKRAKLDRSIGGICNMGGLPHALFVIDTNKEHIAIKEANKLNIPVIAVLD 190
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 216
TN P GI+Y IPGNDD+ +SI + K + D L+A
Sbjct: 191 TNSDPAGIDYPIPGNDDAVRSIDFFCKIVSDTILEA 226
>TIGR_CMR|BA_3965 [details] [associations]
symbol:BA_3965 "ribosomal protein S2" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000071892 eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299
RefSeq:NP_846208.1 RefSeq:YP_020604.1 RefSeq:YP_029929.1
ProteinModelPortal:Q81WK8 SMR:Q81WK8 DNASU:1086819
EnsemblBacteria:EBBACT00000009487 EnsemblBacteria:EBBACT00000014287
EnsemblBacteria:EBBACT00000024301 GeneID:1086819 GeneID:2820094
GeneID:2848104 KEGG:ban:BA_3965 KEGG:bar:GBAA_3965 KEGG:bat:BAS3678
OMA:SYIDRAY BioCyc:BANT260799:GJAJ-3736-MONOMER
BioCyc:BANT261594:GJ7F-3853-MONOMER Uniprot:Q81WK8
Length = 233
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 111/221 (50%), Positives = 156/221 (70%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LEAGVHFGHQTR WNPKM YIF RN I+II+L+KT+ E+A + + + G +L
Sbjct: 9 LLEAGVHFGHQTRRWNPKMKRYIFTERNGIYIIDLQKTVKKVEEAFKVMRDIAAEGGDIL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA+ I EA RAGM F++QRWLGG LTNF+TI+ I+RLK+++ +G+
Sbjct: 69 FVGTKKQAQEAIKEEATRAGMYFVNQRWLGGTLTNFQTIQKRIKRLKDIERMQEDGTFEV 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L KKE + ++ +L + +GGIK+M +P A+F++D + AV+EA KL+IPIIG+VD
Sbjct: 129 LPKKEVVQLKKELERLEKFLGGIKDMKGLPSALFVVDPRKERIAVAEARKLHIPIIGIVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGE 221
TN PD I++VIP NDD+ +++ L T + DA L+AK GE
Sbjct: 189 TNCDPDEIDHVIPANDDAIRAVKLLTSKMADAILEAKQ-GE 228
>TIGR_CMR|DET_0377 [details] [associations]
symbol:DET_0377 "ribosomal protein S2" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
HSSP:P80371 RefSeq:YP_181123.1 ProteinModelPortal:Q3Z9H6
STRING:Q3Z9H6 GeneID:3230301 KEGG:det:DET0377 PATRIC:21607823
BioCyc:DETH243164:GJNF-377-MONOMER Uniprot:Q3Z9H6
Length = 245
Score = 522 (188.8 bits), Expect = 6.4e-53, Sum P(2) = 6.4e-53
Identities = 100/217 (46%), Positives = 145/217 (66%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LEAG HFGHQT W+P+M YIF RN IHII+LEKT+ M +KA YI Q+ G +L
Sbjct: 9 LLEAGAHFGHQTSRWHPRMKKYIFTKRNGIHIIDLEKTVVMLDKACNYINQVVSEGGKVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA+ ++A EA R GM FI+QRW GG+LTNF +I++ I L ++ G +
Sbjct: 69 FVGTKKQAQEILAEEAKRCGMYFINQRWTGGILTNFHSIQSRIDYLVRLEDQQARGDFNR 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L KKEA + +LNR +GG K M +PD IF++D K A++EA ++ +P++ +VD
Sbjct: 129 LPKKEAQKLAEEIARLNRTMGGFKEMTRLPDVIFVVDPTKEKIAMAEAKRMGVPLVAMVD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
TN +PD ++Y IP NDD+ ++I L + D+ ++A+
Sbjct: 189 TNCNPDEVDYPIPSNDDAMRAIKLICSKMADSVIEAQ 225
Score = 48 (22.0 bits), Expect = 6.4e-53, Sum P(2) = 6.4e-53
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 394 AMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGEA 427
AM+ I L ++ +IE + +L V + + GEA
Sbjct: 206 AMRAIKLICSKMADSVIEAQNALKVTEVETTGEA 239
>TIGR_CMR|SPO_1976 [details] [associations]
symbol:SPO_1976 "ribosomal protein S2" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_167211.1 ProteinModelPortal:Q5LRZ4 SMR:Q5LRZ4
GeneID:3192960 KEGG:sil:SPO1976 PATRIC:23377283 Uniprot:Q5LRZ4
Length = 257
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 108/218 (49%), Positives = 151/218 (69%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LEAGVHFGHQT+ WNP+MS +I+G RN IHI++L +T+ M ++A++ + G +L
Sbjct: 11 LLEAGVHFGHQTQRWNPRMSPFIYGARNGIHILDLTQTVPMLDQALKAVRDTVAKGGRVL 70
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTKRQA G IA A ++ +++ RWLGG LTN+KT+ SIQRL+ +D + G+
Sbjct: 71 FVGTKRQASGPIAEAAEKSAQYYMNHRWLGGTLTNWKTVSQSIQRLRMIDEKMEGGA-EG 129
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKE L R Q KL +GGI+ M +PD +F+IDV A++EA KL IP++ VVD
Sbjct: 130 LTKKERLGMERDQAKLQASLGGIREMGGVPDLLFVIDVKKEALAIAEANKLGIPVVAVVD 189
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKT 218
TN SPDG++Y+IPGNDD+A++I+LY A LD T
Sbjct: 190 TNCSPDGVDYIIPGNDDAARAISLYCDLAARAALDGMT 227
>UNIPROTKB|P66537 [details] [associations]
symbol:rpsB "30S ribosomal protein S2" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005886 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0006412 GO:GO:0003735 EMBL:BX842581 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
PIR:E70925 RefSeq:NP_217406.1 RefSeq:NP_337469.1
RefSeq:YP_006516343.1 ProteinModelPortal:P66537 SMR:P66537
PRIDE:P66537 EnsemblBacteria:EBMYCT00000003768
EnsemblBacteria:EBMYCT00000072764 GeneID:13317683 GeneID:887187
GeneID:925322 KEGG:mtc:MT2958 KEGG:mtu:Rv2890c KEGG:mtv:RVBD_2890c
PATRIC:18128274 TubercuList:Rv2890c Uniprot:P66537
Length = 287
Score = 537 (194.1 bits), Expect = 1.1e-51, P = 1.1e-51
Identities = 102/212 (48%), Positives = 145/212 (68%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+L++G HFGHQTR WNPKM +IF RN I+II+L++TL +KA ++ + G++L
Sbjct: 9 LLDSGTHFGHQTRRWNPKMKRFIFTDRNGIYIIDLQQTLTFIDKAYEFVKETVAHGGSVL 68
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA+ +A EA R GMP+++QRWLGG+LTNF T+ +QRLKE++ G
Sbjct: 69 FVGTKKQAQESVAAEATRVGMPYVNQRWLGGMLTNFSTVHKRLQRLKELEAMEQTGGFEG 128
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
+KKE L R++ KL R +GGI++M +P AI+++D AV EA KL IP+I ++D
Sbjct: 129 RTKKEILGLTREKNKLERSLGGIRDMAKVPSAIWVVDTNKEHIAVGEARKLGIPVIAILD 188
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDA 212
TN PD ++Y IPGNDD+ +S AL T+ I A
Sbjct: 189 TNCDPDEVDYPIPGNDDAIRSAALLTRVIASA 220
>TIGR_CMR|CJE_1316 [details] [associations]
symbol:CJE_1316 "ribosomal protein S2" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0015935
HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_179303.1 HSSP:P80371 ProteinModelPortal:Q5HTT2 SMR:Q5HTT2
STRING:Q5HTT2 GeneID:3231823 KEGG:cjr:CJE1316 PATRIC:20044432
BioCyc:CJEJ195099:GJC0-1342-MONOMER Uniprot:Q5HTT2
Length = 263
Score = 536 (193.7 bits), Expect = 1.4e-51, P = 1.4e-51
Identities = 104/228 (45%), Positives = 149/228 (65%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+LE GVHFGHQTR WNPKM +IFG R I++I+L+KTL + + T+L
Sbjct: 7 LLECGVHFGHQTRRWNPKMKKFIFGERKGIYVIDLQKTLRYFRYTYNIVRDAAAEGKTIL 66
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FVGTK+QA G I A + GMP+++ RWLGG++TNF TI+ SI++L+ ++ +GSI+
Sbjct: 67 FVGTKKQAGGAIKEYAEKCGMPYVNHRWLGGMMTNFGTIRQSIRKLEVIEKMEEDGSIKL 126
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L+KKEAL+ RK+ KL +GGI+ M PD IF+ID K AV EA +L IP++ +D
Sbjct: 127 LTKKEALMLTRKKEKLLAYLGGIRYMKTQPDMIFVIDTVKEKIAVQEANRLRIPVVAPLD 186
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLA 228
TN PD + Y IPGNDD+ +S+ L+ + + +A + K + E + LA
Sbjct: 187 TNCDPDLVTYPIPGNDDAIRSVQLFCQEMAEAINEGKALREQDGEALA 234
>TIGR_CMR|APH_0397 [details] [associations]
symbol:APH_0397 "ribosomal protein S2" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 OMA:NVAGGTD RefSeq:YP_505002.1
ProteinModelPortal:Q2GKU9 SMR:Q2GKU9 STRING:Q2GKU9 GeneID:3930049
KEGG:aph:APH_0397 PATRIC:20949402 ProtClustDB:PRK05299
BioCyc:APHA212042:GHPM-425-MONOMER Uniprot:Q2GKU9
Length = 296
Score = 513 (185.6 bits), Expect = 6.8e-49, P = 6.8e-49
Identities = 99/218 (45%), Positives = 145/218 (66%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFG-HRNK-IHIINLEKTLYMYEKAIRYIYQLGFSKGT 58
++EAGVH GH+ WNP M+ YI+G HR K IHII+L KT + A+ +Y + +G
Sbjct: 12 LMEAGVHLGHKAGRWNPAMAPYIYGVHRYKDIHIIDLRKTAVLLRNALSVLYDVVHRRGR 71
Query: 59 LLFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSI 118
+LFVGTK QA VIA EA R G +++ RWLGG+LTN++T+ +SI+RL + + + N +
Sbjct: 72 VLFVGTKVQASNVIAEEAARCGQYYVNHRWLGGMLTNWETVSSSIRRLLDFEKLL-NDTD 130
Query: 119 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 178
K +KKE L+F +K+ KL R +GGI+ M +P +F+ID A+ EA KL IP++ V
Sbjct: 131 AKFTKKELLMFDKKREKLERSLGGIREMGGLPHILFVIDTNKEHIAIQEANKLKIPVVAV 190
Query: 179 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA 216
+DTN P G++Y IPGNDDS +SI + + + + L+A
Sbjct: 191 LDTNSDPRGVDYPIPGNDDSIRSIDFFCRAVSNTILEA 228
>TIGR_CMR|NSE_0948 [details] [associations]
symbol:NSE_0948 "ribosomal protein S2" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015935 "small ribosomal subunit" evidence=ISS]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0006412 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
GO:GO:0015935 HAMAP:MF_00291_B InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 TIGRFAMs:TIGR01011 HOGENOM:HOG000071892
eggNOG:COG0052 KO:K02967 ProtClustDB:PRK05299 OMA:SYIDRAY
RefSeq:YP_506812.1 ProteinModelPortal:Q2GCI4 STRING:Q2GCI4
GeneID:3932142 KEGG:nse:NSE_0948 PATRIC:22681875
BioCyc:NSEN222891:GHFU-950-MONOMER Uniprot:Q2GCI4
Length = 298
Score = 472 (171.2 bits), Expect = 2.7e-44, P = 2.7e-44
Identities = 112/289 (38%), Positives = 158/289 (54%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRN-KIHIINLEKTLYMYEKAIRYIYQLGFSKGTL 59
+ E G H GH+TRFWNPKM SYI+G N K HI++L+KT+ M A+ I + + G +
Sbjct: 13 LFEVGAHLGHKTRFWNPKMVSYIYGTSNAKTHIVDLQKTVPMLRTALNAISDVAANSGRV 72
Query: 60 LFVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMD-LFITNGSI 118
LFVGTK QA +I EA R G +++ RW G+ TN+ T+ S+++L + L G +
Sbjct: 73 LFVGTKMQACDIIKEEATRCGQYYVNLRWPSGMFTNWNTVSKSVKKLVHYEKLLEQEGDV 132
Query: 119 RKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGV 178
LSKKE L RK+ ++ + +GG++ M +P+ IF+ID AV EA KL IP++ V
Sbjct: 133 --LSKKERLSINRKRERIEKYLGGVRKMGGLPNIIFVIDPKKEHIAVEEAWKLGIPVVAV 190
Query: 179 VDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDA--KTVGELRSKTLAPIMECKKA 236
VDTN P I Y IPGNDDS + I Y + DA L + +SK L + K A
Sbjct: 191 VDTNCDPSKITYAIPGNDDSLRCIEYYCSLVADAVLVGIESELQRKQSKELDDKADEKAA 250
Query: 237 LIEANGKLSKAEEILRIKLGKKILN---ISNRNAK-DGVIAIYISEKVG 281
+ + K I R K L +S ++ K D V A + E G
Sbjct: 251 KVSHSDGQKKGASI-RAGTDKAALQKRKVSPKSEKQDNVDAAKLPENKG 298
>TIGR_CMR|GSU_1919 [details] [associations]
symbol:GSU_1919 "uridylate kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_952968.1
ProteinModelPortal:Q74BW2 SMR:Q74BW2 GeneID:2685329
KEGG:gsu:GSU1919 PATRIC:22026703
BioCyc:GSUL243231:GH27-1976-MONOMER Uniprot:Q74BW2
Length = 239
Score = 457 (165.9 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 97/233 (41%), Positives = 135/233 (57%)
Query: 414 YSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISN 473
Y +LK GEAL Y LA+VIGGGNI RG++
Sbjct: 6 YGRVLLKLS--GEALAGDQGYGIDPRTITAIAAEIKEVVATGSQLALVIGGGNIFRGLAA 63
Query: 474 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 533
+ +DR++ADYMGMLAT+INSLA+ D L K G+ + V SAI++++ E YI AI++L
Sbjct: 64 SSKGMDRASADYMGMLATMINSLAMQDALEKVGVDTRVQSAIAMQEVAEPYIRRRAIRHL 123
Query: 534 EEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKK 593
E+G++VIF G GNP+FTTD VDG+Y++DP K +AI Y +
Sbjct: 124 EKGRIVIFGAGTGNPYFTTDTAASLRAMEIGADVILKGTKVDGVYSADPKKDPTAIKYPR 183
Query: 594 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
+T+ EV+ K L++MD+TA S C D LPI VF I G +K+V+ G+ GT+V
Sbjct: 184 LTYLEVLKKGLQVMDATATSLCMDNNLPIIVFDITTYGNIKKVVCGEEIGTIV 236
>TIGR_CMR|CHY_1785 [details] [associations]
symbol:CHY_1785 "uridylate kinase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_360605.1 HSSP:P65938 ProteinModelPortal:Q3AB79 SMR:Q3AB79
STRING:Q3AB79 GeneID:3727662 KEGG:chy:CHY_1785 PATRIC:21276681
BioCyc:CHYD246194:GJCN-1784-MONOMER Uniprot:Q3AB79
Length = 242
Score = 441 (160.3 bits), Expect = 6.9e-41, P = 6.9e-41
Identities = 89/189 (47%), Positives = 125/189 (66%)
Query: 458 LAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISI 517
+A+V+GGGNI RG+S + +DR+TADYMGMLAT+INSLAL D L K GI + V +AI +
Sbjct: 49 VAVVVGGGNIWRGLSGSAKGMDRATADYMGMLATVINSLALQDALEKLGIDTRVQTAIEM 108
Query: 518 EKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGI 577
+ E YI AI++LE+G+VVIFA G GNP+F+TD VDG+
Sbjct: 109 RQIAEPYIRRRAIRHLEKGRVVIFAAGTGNPYFSTDTTAALRAAEIEAEVILMAKRVDGV 168
Query: 578 YNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVI 637
Y+SDP K +A + ++ + EV+++ L +MDSTA S C D +P+ VF++ G +KRVI
Sbjct: 169 YDSDPLKNPNAQKFDELEYIEVLNRGLGVMDSTATSLCMDNNIPLIVFNLEVPGNIKRVI 228
Query: 638 EGKNEGTLV 646
G+N GT+V
Sbjct: 229 LGENIGTIV 237
>TIGR_CMR|DET_0375 [details] [associations]
symbol:DET_0375 "uridylate kinase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_181121.1
ProteinModelPortal:Q3Z9H8 STRING:Q3Z9H8 GeneID:3230311
KEGG:det:DET0375 PATRIC:21607819 BioCyc:DETH243164:GJNF-375-MONOMER
Uniprot:Q3Z9H8
Length = 241
Score = 421 (153.3 bits), Expect = 1.1e-38, P = 1.1e-38
Identities = 94/237 (39%), Positives = 130/237 (54%)
Query: 411 EKEYSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRG 470
E +Y +LK GEA Y +AIV+GGGNI RG
Sbjct: 3 EIKYKRILLKLS--GEAFKGATGYGIDIPTVRSIAHEIKHICLMGVEVAIVVGGGNIWRG 60
Query: 471 ISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAI 530
+ + IDR +ADY GMLATIIN+L L D L + GI++ SA+++++ E YI AI
Sbjct: 61 ATAAKEGIDRVSADYAGMLATIINALTLQDALEREGIVTRTQSALAVQQVAEPYICRRAI 120
Query: 531 KYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXX-VDGIYNSDPNKCLSAI 589
++LE+G+VVIFAGG GNP+ TTD VDG+Y +DP K A
Sbjct: 121 RHLEKGRVVIFAGGTGNPYMTTDTAAALRAIEIEADVLLMAKNKVDGVYTADPKKHPEAT 180
Query: 590 IYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
+++ +T E I+K+L++MD+TA S C D KLPI VF + S +L I G+ GTL+
Sbjct: 181 LFQHLTHMEAINKRLQVMDATALSLCLDNKLPIIVFDLQSSESLVSAISGQPIGTLI 237
>TIGR_CMR|CPS_1555 [details] [associations]
symbol:CPS_1555 "uridylate kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_268297.1
ProteinModelPortal:Q485G8 SMR:Q485G8 STRING:Q485G8 PRIDE:Q485G8
GeneID:3522188 KEGG:cps:CPS_1555 PATRIC:21466317
BioCyc:CPSY167879:GI48-1636-MONOMER Uniprot:Q485G8
Length = 247
Score = 406 (148.0 bits), Expect = 4.5e-37, P = 4.5e-37
Identities = 89/233 (38%), Positives = 127/233 (54%)
Query: 414 YSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISN 473
Y +LK GEALM + + + +VIGGGN+ RG
Sbjct: 9 YRRILLKLS--GEALMGDEGFGIDPKVLDRMAQEIKELVEMGIQVGLVIGGGNLFRGAGL 66
Query: 474 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 533
++R D MGMLAT++N LA+ D L+++ + + +MSAI + E Y NAI L
Sbjct: 67 AEAGMNRVVGDQMGMLATVMNGLAMRDALHRAFVNTRLMSAIDLAGVCERYNWANAISLL 126
Query: 534 EEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKK 593
+ G+VVIF+ G GNPFFTTD VDG+Y+ DP K A +Y +
Sbjct: 127 KSGRVVIFSAGTGNPFFTTDSAACLRGIEIEADAVLKATKVDGVYSEDPAKNPEAELYSE 186
Query: 594 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
+++DEV+ K+L++MD AF+ RD +PIRVF++ K GALK VI G EGT++
Sbjct: 187 LSYDEVLDKELKVMDLAAFTLARDHNIPIRVFNMNKPGALKSVIMGNTEGTVI 239
>TIGR_CMR|VC_2258 [details] [associations]
symbol:VC_2258 "uridylate kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 ProtClustDB:PRK00358
PIR:H82099 RefSeq:NP_231889.1 ProteinModelPortal:Q9KPV4 SMR:Q9KPV4
PRIDE:Q9KPV4 DNASU:2613180 GeneID:2613180 KEGG:vch:VC2258
PATRIC:20083559 Uniprot:Q9KPV4
Length = 243
Score = 405 (147.6 bits), Expect = 5.8e-37, P = 5.8e-37
Identities = 86/236 (36%), Positives = 132/236 (55%)
Query: 414 YSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISN 473
Y +LK GEAL + + + +VIGGGN+ RG
Sbjct: 9 YQRILLKLS--GEALQGSEGFGIDPTVLDRMAQEVKELVELGVQVGVVIGGGNLFRGAGL 66
Query: 474 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 533
++R D+MGMLAT++N LA+ D L+++ + + +MSAI + + Y +AI+ L
Sbjct: 67 AKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDDYSWSDAIREL 126
Query: 534 EEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKK 593
+G+VVIFA G GNPFFTTD VDG+Y++DP A +Y K
Sbjct: 127 RQGRVVIFAAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVYSADPVANPDAQLYDK 186
Query: 594 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEI 649
+ +++V+ K+L++MD AF+ RD K+PIRVF++ K GAL+RV+ G+ EGTL+ ++
Sbjct: 187 LAYNDVLEKELKVMDLAAFTLARDHKMPIRVFNMNKPGALRRVVMGEAEGTLISDV 242
>UNIPROTKB|P0A7E9 [details] [associations]
symbol:pyrH "PyrH" species:83333 "Escherichia coli K-12"
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=IEA] [GO:0044210 "'de novo' CTP biosynthetic process"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042802
"identical protein binding" evidence=IDA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0033862 "UMP kinase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006221 "pyrimidine nucleotide
biosynthetic process" evidence=IEA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008652 EMBL:U70214
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 EMBL:D13334
GO:GO:0044210 eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903
OMA:RHMEKGR HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 EMBL:X78809 PIR:B45269 RefSeq:NP_414713.1
RefSeq:YP_488473.1 PDB:2BND PDB:2BNE PDB:2BNF PDB:2V4Y PDBsum:2BND
PDBsum:2BNE PDBsum:2BNF PDBsum:2V4Y ProteinModelPortal:P0A7E9
SMR:P0A7E9 DIP:DIP-31830N IntAct:P0A7E9 MINT:MINT-1222953
PaxDb:P0A7E9 PRIDE:P0A7E9 EnsemblBacteria:EBESCT00000004594
EnsemblBacteria:EBESCT00000016112 GeneID:12933231 GeneID:944989
KEGG:ecj:Y75_p0167 KEGG:eco:b0171 PATRIC:32115451 EchoBASE:EB1501
EcoGene:EG11539 BioCyc:EcoCyc:UMPKI-MONOMER
BioCyc:ECOL316407:JW0166-MONOMER BioCyc:MetaCyc:UMPKI-MONOMER
BRENDA:2.7.4.22 SABIO-RK:P0A7E9 EvolutionaryTrace:P0A7E9
Genevestigator:P0A7E9 Uniprot:P0A7E9
Length = 241
Score = 404 (147.3 bits), Expect = 7.5e-37, P = 7.5e-37
Identities = 87/235 (37%), Positives = 129/235 (54%)
Query: 414 YSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISN 473
Y +LK GEAL + + + +VIGGGN+ RG
Sbjct: 9 YKRILLKLS--GEALQGTEGFGIDASILDRMAQEIKELVELGIQVGVVIGGGNLFRGAGL 66
Query: 474 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 533
++R D+MGMLAT++N LA+ D L+++ + + +MSAI + +SY AI L
Sbjct: 67 AKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLNGVCDSYSWAEAISLL 126
Query: 534 EEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKK 593
+VVI + G GNPFFTTD VDG++ +DP K +A +Y++
Sbjct: 127 RNNRVVILSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPAKDPTATMYEQ 186
Query: 594 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYE 648
+T+ EV+ K+L++MD AF+ RD KLPIRVF++ K GAL+RV+ G+ EGTL+ E
Sbjct: 187 LTYSEVLEKELKVMDLAAFTLARDHKLPIRVFNMNKPGALRRVVMGEKEGTLITE 241
>TIGR_CMR|BA_3963 [details] [associations]
symbol:BA_3963 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:NP_846206.1 RefSeq:YP_020602.2 RefSeq:YP_029927.1
ProteinModelPortal:Q81WL0 SMR:Q81WL0 DNASU:1086816
EnsemblBacteria:EBBACT00000009368 EnsemblBacteria:EBBACT00000014903
EnsemblBacteria:EBBACT00000024399 GeneID:1086816 GeneID:2819541
GeneID:2850619 KEGG:ban:BA_3963 KEGG:bar:GBAA_3963 KEGG:bat:BAS3676
ProtClustDB:PRK00358 BioCyc:BANT260799:GJAJ-3734-MONOMER
BioCyc:BANT261594:GJ7F-3851-MONOMER Uniprot:Q81WL0
Length = 240
Score = 403 (146.9 bits), Expect = 9.6e-37, P = 9.6e-37
Identities = 89/235 (37%), Positives = 131/235 (55%)
Query: 413 EYSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGIS 472
+Y+ VLK GEAL + +A+V+GGGNI RG
Sbjct: 5 KYNRVVLKLS--GEALAGEQGFGINPAVIKSVAEQVKEIAELDVEVAVVVGGGNIWRGKI 62
Query: 473 NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKY 532
+DR+ ADYMGMLAT++NSLAL D L GI + V ++I + + E YI A+++
Sbjct: 63 GSEMGMDRAGADYMGMLATVMNSLALQDSLENIGIQTRVQTSIEMRQVAEPYIRRKAVRH 122
Query: 533 LEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXX-VDGIYNSDPNKCLSAIIY 591
LE+ +VVIFA G GNP+F+TD VDG+YN+DP+ +A Y
Sbjct: 123 LEKKRVVIFAAGTGNPYFSTDTTAALRAAEIEADVILMAKNNVDGVYNADPSIDPTATKY 182
Query: 592 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
+ +T+ +V+ + L +MDSTA S C D +P+ VFS+++ G +KR + G+N GT+V
Sbjct: 183 ETLTYLDVLKEGLGVMDSTASSLCMDNDIPLIVFSVMEKGNIKRAVLGENIGTVV 237
>TIGR_CMR|CBU_1384 [details] [associations]
symbol:CBU_1384 "uridylate kinase" species:227377
"Coxiella burnetii RSA 493" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_820373.1
ProteinModelPortal:Q83BV3 SMR:Q83BV3 PRIDE:Q83BV3 GeneID:1209290
KEGG:cbu:CBU_1384 PATRIC:17931513
BioCyc:CBUR227377:GJ7S-1372-MONOMER Uniprot:Q83BV3
Length = 243
Score = 398 (145.2 bits), Expect = 3.4e-36, P = 3.4e-36
Identities = 90/233 (38%), Positives = 124/233 (53%)
Query: 414 YSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISN 473
Y +LK GEALM + +AIVIGGGN RG +
Sbjct: 9 YRRVLLKMS--GEALMGKGLHAIDPNVLDRMAKDVTQVYQLGVQIAIVIGGGNFFRGAAL 66
Query: 474 KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYL 533
+ I+R T DYMGMLAT++N+LAL D +S + ++SAI + +++ AI +L
Sbjct: 67 QAAGINRITGDYMGMLATLMNALALRDAFERSNLPVRILSAIPMTGVADAFHRRKAIHHL 126
Query: 534 EEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKK 593
++G+VVIFA G GNP TTD VDG+Y+ DP K A +YK
Sbjct: 127 QQGRVVIFAAGTGNPLVTTDSAASLRGIEINADVVLKATNVDGVYSDDPAKNPQAKLYKH 186
Query: 594 ITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
+++ E + K+L +MD AF CRD +P+RVF+I K GAL VI + EGTLV
Sbjct: 187 LSYQEALKKELAVMDLAAFCQCRDYNMPLRVFNINKPGALLSVIMNQEEGTLV 239
>TIGR_CMR|SPO_1662 [details] [associations]
symbol:SPO_1662 "uridylate kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P65938 RefSeq:YP_166901.1
ProteinModelPortal:Q5LSV4 GeneID:3192709 KEGG:sil:SPO1662
PATRIC:23376649 Uniprot:Q5LSV4
Length = 251
Score = 398 (145.2 bits), Expect = 3.4e-36, P = 3.4e-36
Identities = 87/245 (35%), Positives = 134/245 (54%)
Query: 401 SSDQIPKKIIEKEYSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAI 460
+S + P + Y +LK GEALM + + +
Sbjct: 5 TSPETPSDPSQTRYKRVMLKIS--GEALMGDQGFGLHPPTVKRIAHEIKTVHDMGVEICM 62
Query: 461 VIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKF 520
VIGGGNI RG+S Q ++R+TADYMGMLAT++N+L + L G+ + V+SAI +++
Sbjct: 63 VIGGGNIFRGLSGAAQGMERTTADYMGMLATVMNALGMQAALEGLGVFTRVISAIRMDEV 122
Query: 521 LESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXX-XXXXXXXXXVDGIYN 579
E YI A+++LE+ +V IFA G GNP+FTTD VDG+Y+
Sbjct: 123 AEPYIRRRAVRHLEKKRVCIFAAGTGNPYFTTDTAATLRANEMACEAIFMGKNGVDGVYD 182
Query: 580 SDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEG 639
DP A+ Y +I++DEV++K+L++MD++A + RD LP+ VFS+ +G + ++ G
Sbjct: 183 KDPALHDDAVRYDEISYDEVLAKRLKVMDASAIALARDNNLPLIVFSLDTAGGFRGILAG 242
Query: 640 KNEGT 644
EGT
Sbjct: 243 --EGT 245
>UNIPROTKB|P65929 [details] [associations]
symbol:pyrH "Uridylate kinase" species:1773 "Mycobacterium
tuberculosis" [GO:0000287 "magnesium ion binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0006225 "UDP biosynthetic
process" evidence=IDA] [GO:0033862 "UMP kinase activity"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] [GO:0051289
"protein homotetramerization" evidence=IPI] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005886 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000287 GO:GO:0006200 GO:GO:0008652
GO:GO:0051289 EMBL:BX842581 Gene3D:3.40.1160.10 SUPFAM:SSF53633
GO:GO:0033862 GO:GO:0006225 GO:GO:0044210 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR HAMAP:MF_01220_B
TIGRFAMs:TIGR02075 ProtClustDB:PRK00358 PIR:F70924
RefSeq:NP_217399.1 RefSeq:NP_337462.2 RefSeq:YP_006516336.1
PDB:3NWY PDBsum:3NWY ProteinModelPortal:P65929 SMR:P65929
PRIDE:P65929 EnsemblBacteria:EBMYCT00000003573
EnsemblBacteria:EBMYCT00000069614 GeneID:13317676 GeneID:887709
GeneID:925329 KEGG:mtc:MT2951 KEGG:mtu:Rv2883c KEGG:mtv:RVBD_2883c
PATRIC:18128260 TubercuList:Rv2883c EvolutionaryTrace:P65929
Uniprot:P65929
Length = 261
Score = 392 (143.0 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 75/189 (39%), Positives = 115/189 (60%)
Query: 458 LAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISI 517
+A+VIGGGN RG + ++R+ +DYMGML T++NSLAL D L K GI++ V +AI++
Sbjct: 71 IAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITM 130
Query: 518 EKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGI 577
+ E Y+PL A+++LE+G+VVIF G+G P+F+TD VDG+
Sbjct: 131 GQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGV 190
Query: 578 YNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVI 637
+ DP A + ++ EV+ + L + D+TAFS C D +PI VF+++ G + R +
Sbjct: 191 FAEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAV 250
Query: 638 EGKNEGTLV 646
G+ GTLV
Sbjct: 251 RGEKIGTLV 259
>TIGR_CMR|NSE_0946 [details] [associations]
symbol:NSE_0946 "uridylate kinase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0009041 "uridylate
kinase activity" evidence=ISS] [GO:0015949 "nucleobase-containing
small molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 Gene3D:3.40.1160.10 SUPFAM:SSF53633 EMBL:CP000237
GenomeReviews:CP000237_GR GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
RefSeq:YP_506810.1 ProteinModelPortal:Q2GCI6 STRING:Q2GCI6
GeneID:3931337 KEGG:nse:NSE_0946 PATRIC:22681871
ProtClustDB:CLSK2527950 BioCyc:NSEN222891:GHFU-948-MONOMER
Uniprot:Q2GCI6
Length = 233
Score = 392 (143.0 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 82/189 (43%), Positives = 115/189 (60%)
Query: 458 LAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISI 517
+ +VIGGGNI RG S+ I NIDR+T DYMGMLAT+IN+LAL +N G++S V SAI +
Sbjct: 43 VCLVIGGGNIYRG-SSGIPNIDRATGDYMGMLATVINALALQGAINNLGVVSRVQSAIPM 101
Query: 518 EKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGI 577
E Y+ AI ++E+ ++VIFA G GNPFFTTD VDGI
Sbjct: 102 RSICEPYVRQKAISHMEKNRIVIFAAGTGNPFFTTDTAAVLRSVEMGCDVMLKGTLVDGI 161
Query: 578 YNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVI 637
Y+ DP ++A K+++ +V+SKKL ++DS+A S RD +P+ +FS+ A VI
Sbjct: 162 YSDDPRTNINAERITKLSYTDVLSKKLRVLDSSAVSIARDNGMPVVIFSLDSEMAFYEVI 221
Query: 638 EGK-NEGTL 645
+ N T+
Sbjct: 222 NKQGNYSTI 230
>TIGR_CMR|APH_0111 [details] [associations]
symbol:APH_0111 "uridylate kinase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000235 GenomeReviews:CP000235_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
RefSeq:YP_504739.1 ProteinModelPortal:Q2GLL2 STRING:Q2GLL2
GeneID:3930967 KEGG:aph:APH_0111 PATRIC:20948786 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
BioCyc:APHA212042:GHPM-146-MONOMER HAMAP:MF_01220_B
PANTHER:PTHR26059 TIGRFAMs:TIGR02075 Uniprot:Q2GLL2
Length = 244
Score = 387 (141.3 bits), Expect = 5.2e-35, P = 5.2e-35
Identities = 91/239 (38%), Positives = 128/239 (53%)
Query: 409 IIEK-EYSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNI 467
++E YS +LK GEAL + L IV+GGGNI
Sbjct: 7 VVENVRYSRVLLKVS--GEALAGERGFGFDQDVIGKLSCDLKKVRESGVELCIVVGGGNI 64
Query: 468 CRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPL 527
RG S +R++ DY+GMLAT+IN+LAL + L GI S V+SAI + E+YI
Sbjct: 65 FRGSSTSF-GFERASNDYVGMLATMINALALQNSLEDMGIASRVLSAIPMTAVCETYIRR 123
Query: 528 NAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLS 587
AI++LE+G+VVI A GIG+PFFTTD VDG+Y+SDP K S
Sbjct: 124 RAIRHLEKGRVVICAAGIGSPFFTTDTAAVLRSIEMRCDAIFKGTQVDGVYSSDPKKDCS 183
Query: 588 AIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
A Y KI++ ++++ L+IMD+ A S R+ +PI VF + K A V++G+ T +
Sbjct: 184 ATRYDKISYHDLLASDLKIMDAAAVSLARENSIPIIVFDLGKENAFSEVMKGRGTFTTI 242
>TIGR_CMR|SO_1631 [details] [associations]
symbol:SO_1631 "uridylate kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:AE014299 GenomeReviews:AE014299_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 HSSP:P0A7E9 RefSeq:NP_717242.1
ProteinModelPortal:Q8EGH3 SMR:Q8EGH3 GeneID:1169425
KEGG:son:SO_1631 PATRIC:23522896 Uniprot:Q8EGH3
Length = 242
Score = 386 (140.9 bits), Expect = 6.7e-35, P = 6.7e-35
Identities = 82/222 (36%), Positives = 123/222 (55%)
Query: 425 GEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGISNKIQNIDRSTAD 484
GEALM + + + +VIGGGN+ RG ++R D
Sbjct: 18 GEALMGDEGFGIDPKVLDRMAQEVKELVELGIQVGVVIGGGNLFRGEGLAKAGMNRVVGD 77
Query: 485 YMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIKYLEEGKVVIFAGG 544
+MGMLAT++N LA+ D L+++ + + +MSAI ++ + Y AI L+ G+VVIFA G
Sbjct: 78 HMGMLATVMNGLAMRDALHRAYVNARLMSAIPLKGVCDDYNWAEAISLLKSGRVVIFAAG 137
Query: 545 IGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIYKKITFDEVISKKL 604
GNPF TTD VDG+Y+ DP K A+ Y ++T+ EV+ K+L
Sbjct: 138 TGNPFCTTDSAACLRGIEIEAEVVLKGTKVDGVYSDDPMKNPEAVKYDELTYTEVLDKEL 197
Query: 605 EIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
++MD AF+ RD +PI VF++ K GAL+RV+ G+ EGT++
Sbjct: 198 KVMDLAAFTMARDHDMPILVFNMNKPGALRRVVMGEEEGTMI 239
>TAIR|locus:2093949 [details] [associations]
symbol:AT3G18680 species:3702 "Arabidopsis thaliana"
[GO:0006221 "pyrimidine nucleotide biosynthetic process"
evidence=IEA;ISS] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0033862 "UMP kinase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0006399 "tRNA metabolic process"
evidence=RCA] [GO:0009073 "aromatic amino acid family biosynthetic
process" evidence=RCA] [GO:0009658 "chloroplast organization"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0045036 "protein
targeting to chloroplast" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008652 EMBL:AB026654
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0006221
UniGene:At.6380 UniGene:At.69640 eggNOG:COG0528
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 EMBL:AY050828 EMBL:AY091161 IPI:IPI00526120
RefSeq:NP_188498.1 ProteinModelPortal:Q9LSA9 SMR:Q9LSA9
IntAct:Q9LSA9 STRING:Q9LSA9 PaxDb:Q9LSA9 PRIDE:Q9LSA9 ProMEX:Q9LSA9
EnsemblPlants:AT3G18680.1 GeneID:821399 KEGG:ath:AT3G18680
TAIR:At3g18680 OMA:IKGKHSG PhylomeDB:Q9LSA9 ProtClustDB:CLSN2915342
ArrayExpress:Q9LSA9 Genevestigator:Q9LSA9 Uniprot:Q9LSA9
Length = 339
Score = 379 (138.5 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 75/190 (39%), Positives = 116/190 (61%)
Query: 458 LAIVIGGGNICRGIS-NKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAIS 516
+AIV+GGGNI RG + +DRS+ADY+GMLAT++N++ L + GI + V +A
Sbjct: 138 VAIVVGGGNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFR 197
Query: 517 IEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDG 576
+ + E YI AI++LE+G+VVIFA G GNPFFTTD VDG
Sbjct: 198 MSEVAEPYIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDG 257
Query: 577 IYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRV 636
+++ DP + +A + +T+ EV SK L +MD TA + C++ +P+ VF++ + G + +
Sbjct: 258 VFDDDPKRNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKA 317
Query: 637 IEGKNEGTLV 646
I+G+ GTL+
Sbjct: 318 IKGERVGTLI 327
>TIGR_CMR|ECH_0266 [details] [associations]
symbol:ECH_0266 "uridylate kinase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_507087.1 ProteinModelPortal:Q2GHJ6
STRING:Q2GHJ6 GeneID:3928016 KEGG:ech:ECH_0266 PATRIC:20576049
BioCyc:ECHA205920:GJNR-266-MONOMER Uniprot:Q2GHJ6
Length = 244
Score = 374 (136.7 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 86/236 (36%), Positives = 127/236 (53%)
Query: 413 EYSLAVLKAQQLGEALMKGDAYXXXXXXXXXXXXXXXXXXXXXXXLAIVIGGGNICRGIS 472
+YS +LK GEALM + L +V+GGGNI RG S
Sbjct: 10 KYSRVLLKVS--GEALMGKKGFGCDIEVLDKLSHDLKEVHSFGVQLCLVVGGGNIFRGAS 67
Query: 473 NKIQ-NIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAISIEKFLESYIPLNAIK 531
+R++ DY+GMLAT++N+L+L + L K + S V+SAI I E+YI AI+
Sbjct: 68 ASASFGFERASNDYIGMLATMMNALSLQNALEKVNVQSRVLSAIPITAVCETYIRRRAIR 127
Query: 532 YLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDGIYNSDPNKCLSAIIY 591
+LE+G+VVI A G+G+PFFTTD VDG+Y++DP K A+ Y
Sbjct: 128 HLEKGRVVICAAGVGSPFFTTDTAAALRGIEMGCDAIFKGTQVDGVYSADPKKNADAVRY 187
Query: 592 KKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVY 647
KI++ +++S L+IMD A S R+ +PI VF++ + G+ +I G T +Y
Sbjct: 188 DKISYRDLLSLDLKIMDVAAVSLAREHSVPIIVFNLGQPGSFADIIRGDGLYTTIY 243
>UNIPROTKB|P0C480 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0009536 GO:GO:0009570 GO:GO:0016020 GO:GO:0006412
EMBL:AY522331 GO:GO:0003735 GO:GO:0015935 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 ProteinModelPortal:P0C480 SMR:P0C480
Gramene:P0C480 HOGENOM:HOG000071892 Genevestigator:P0C480
Uniprot:P0C480
Length = 236
Score = 372 (136.0 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 76/219 (34%), Positives = 118/219 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
M+EAGVHFGH + WNPKM+ YI R HI NL +T +A ++ + L
Sbjct: 13 MIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGKSFL 72
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTK++A ++A+ A+RA +++++W G+LTN+ KT + + +++
Sbjct: 73 IVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEKFHH 132
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L K++ + RK L R +GGIK M +PD + ++D A+ E L IP I + D
Sbjct: 133 LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTISLAD 192
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 219
TN PD N IP NDD+ SI L +V A + +++
Sbjct: 193 TNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSL 231
>UNIPROTKB|P0C481 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009536 GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 EMBL:AY522329 GO:GO:0003735 GO:GO:0015935
ProtClustDB:CHL00067 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
RefSeq:YP_654209.2 ProteinModelPortal:P0C481 SMR:P0C481
PRIDE:P0C481 GeneID:4126925 Gramene:P0C481 Uniprot:P0C481
Length = 236
Score = 372 (136.0 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 76/219 (34%), Positives = 118/219 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
M+EAGVHFGH + WNPKM+ YI R HI NL +T +A ++ + L
Sbjct: 13 MIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGKSFL 72
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTK++A ++A+ A+RA +++++W G+LTN+ KT + + +++
Sbjct: 73 IVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEKFHH 132
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L K++ + RK L R +GGIK M +PD + ++D A+ E L IP I + D
Sbjct: 133 LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTISLAD 192
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 219
TN PD N IP NDD+ SI L +V A + +++
Sbjct: 193 TNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSL 231
>UNIPROTKB|P0C482 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0009536 GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 EMBL:X15901 EMBL:AY522330 GenomeReviews:AY522330_GR
GO:GO:0003735 GO:GO:0015935 ProtClustDB:CHL00067 HAMAP:MF_00291_B
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 PIR:JQ0216 RefSeq:NP_039376.1
ProteinModelPortal:P0C482 SMR:P0C482 STRING:P0C482
EnsemblPlants:LOC_Os02g24612.1 EnsemblPlants:LOC_Os10g38278.1
EnsemblPlants:LOC_Osp1g00270.1 GeneID:3131442 KEGG:osa:3131442
Gramene:P0C482 eggNOG:COG0052 KO:K02967 OMA:NVAGGTD Uniprot:P0C482
Length = 236
Score = 372 (136.0 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 76/219 (34%), Positives = 118/219 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
M+EAGVHFGH + WNPKM+ YI R HI NL +T +A ++ + L
Sbjct: 13 MIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGKSFL 72
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTK++A ++A+ A+RA +++++W G+LTN+ KT + + +++
Sbjct: 73 IVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEKFHH 132
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L K++ + RK L R +GGIK M +PD + ++D A+ E L IP I + D
Sbjct: 133 LPKRDVAILKRKLSTLQRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTISLAD 192
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 219
TN PD N IP NDD+ SI L +V A + +++
Sbjct: 193 TNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSL 231
>TIGR_CMR|CJE_1410 [details] [associations]
symbol:CJE_1410 "uridylate kinase" species:195099
"Campylobacter jejuni RM1221" [GO:0009041 "uridylate kinase
activity" evidence=ISS] [GO:0015949 "nucleobase-containing small
molecule interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
GO:GO:0008652 EMBL:CP000025 GenomeReviews:CP000025_GR
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
eggNOG:COG0528 HOGENOM:HOG000047187 KO:K09903 OMA:RHMEKGR
HAMAP:MF_01220_B PANTHER:PTHR26059 TIGRFAMs:TIGR02075
ProtClustDB:PRK00358 RefSeq:YP_179396.1 HSSP:P0A7E9
ProteinModelPortal:Q5HTI9 STRING:Q5HTI9 GeneID:3231916
KEGG:cjr:CJE1410 PATRIC:20044622
BioCyc:CJEJ195099:GJC0-1437-MONOMER Uniprot:Q5HTI9
Length = 239
Score = 372 (136.0 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 74/183 (40%), Positives = 113/183 (61%)
Query: 458 LAIVIGGGNICRGISN-KIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAIS 516
+ IVIGGGNI RG+S K I R++ D+MGMLAT+IN++A+ + L SG+ V SAI
Sbjct: 46 VGIVIGGGNIIRGVSAAKGGLIKRTSGDHMGMLATVINAIAIQEALESSGLEVRVQSAIQ 105
Query: 517 IEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDXXXXXXXXXXXXXXXXXXXXVDG 576
+E F E+YI A ++LE+G+VV+FA G GNP+FTTD V+G
Sbjct: 106 MEAFCETYIMRRAQRHLEKGRVVVFAAGTGNPYFTTDTTAILRAVEIDADMVIKATKVNG 165
Query: 577 IYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRV 636
+Y+ DP + A+ +++DE + +++MD TA + +D KLPI V ++ + G L ++
Sbjct: 166 VYDKDPKQFDDAVFLNTLSYDEAMQDNIKVMDDTAIALAKDNKLPIVVCNMFEEGNLLKI 225
Query: 637 IEG 639
I+G
Sbjct: 226 IQG 228
>UNIPROTKB|Q6ENI1 [details] [associations]
symbol:rps2 "30S ribosomal protein S2, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
GO:GO:0009507 GO:GO:0009536 GO:GO:0006412 GO:GO:0003735
EMBL:AP006728 GO:GO:0015935 RefSeq:YP_052742.1
ProteinModelPortal:Q6ENI1 SMR:Q6ENI1 GeneID:2885954 Gramene:Q6ENI1
ProtClustDB:CHL00067 HAMAP:MF_00291_B InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 Uniprot:Q6ENI1
Length = 236
Score = 369 (135.0 bits), Expect = 4.7e-33, P = 4.7e-33
Identities = 76/219 (34%), Positives = 118/219 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
M+EAGVHFGH + WNPKM+ YI R HI NL +T +A ++ + L
Sbjct: 13 MIEAGVHFGHGIKKWNPKMAPYISAKRKGTHITNLARTTRFLSEACDLVFDAASQGKSFL 72
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
VGTK++A ++A+ A+RA +++++W G+LTN+ KT + + +++
Sbjct: 73 IVGTKKRAADLVASAAIRARCHYVNKKWFSGMLTNWSITKTRLSQFRDLRAEEKMEKFHH 132
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVD 180
L K++ + RK L R +GGIK M +PD + ++D A+ E L IP I + D
Sbjct: 133 LPKRDVAILKRKLSTLLRYLGGIKYMTRLPDIVIVLDQQKEYIALRECAILGIPTISLAD 192
Query: 181 TNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAKTV 219
TN PD N IP NDD+ SI L +V A + +++
Sbjct: 193 TNCDPDLANISIPANDDTMTSIRLILNKLVFAICEGRSL 231
>TIGR_CMR|CPS_1556 [details] [associations]
symbol:CPS_1556 "ribosome recycling factor" species:167879
"Colwellia psychrerythraea 34H" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
RefSeq:YP_268298.1 ProteinModelPortal:Q485G7 SMR:Q485G7
STRING:Q485G7 GeneID:3518539 KEGG:cps:CPS_1556 PATRIC:21466319
BioCyc:CPSY167879:GI48-1637-MONOMER Uniprot:Q485G7
Length = 185
Score = 364 (133.2 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 69/185 (37%), Positives = 125/185 (67%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I +I ++ + +M +I+ LK +L K+RTGRA+ +LDNI V+Y+ T L ++ N+++
Sbjct: 1 MIDEIIEDAQDRMGKSIEALKTSLTKIRTGRAHASLLDNIVVEYYGMDTPLNQVGNVSVP 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
++ +SI F+K M S ++KAI +++LGLNP G +I + +PPLT+ERR+++VK+++
Sbjct: 61 DARNLSITVFDKSMISAVEKAIMKSDLGLNPQSNGTLIRIPLPPLTEERRKDLVKVVRGE 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E K++IR IRRD+N S D+ ++A+ IQK+TD F+ +++++L+ KE
Sbjct: 121 AEGGKVAIRNIRRDANSDFKSLLKEKEISEDDHHQAEDSIQKITDVFVKQVDEVLVKKEA 180
Query: 833 EILTL 837
E++ +
Sbjct: 181 ELMEI 185
>TIGR_CMR|VC_2257 [details] [associations]
symbol:VC_2257 "ribosome recycling factor" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0045182 "translation regulator
activity" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
TIGRFAMs:TIGR00496 OMA:VMVEYYG ProtClustDB:PRK00083 PIR:G82099
RefSeq:NP_231888.1 ProteinModelPortal:Q9KPV5 SMR:Q9KPV5
GeneID:2613179 KEGG:vch:VC2257 PATRIC:20083557 Uniprot:Q9KPV5
Length = 185
Score = 362 (132.5 bits), Expect = 2.7e-32, P = 2.7e-32
Identities = 72/183 (39%), Positives = 121/183 (66%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I++IKK+ +++M +++ LK L K+RTGRA+ +L I V Y+ T L ++AN+
Sbjct: 1 MINEIKKDAQERMEKSVEALKNGLSKIRTGRAHPSLLTGISVDYYGAPTPLNQVANVIAE 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
++ T++I F++E++ ++KAI ++LGLNP G II V +PPLT+ERR ++VK+++
Sbjct: 61 DARTLAITVFDRELTQKVEKAILMSDLGLNPMSAGTIIRVPLPPLTEERRRDLVKIVRGE 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E ++++R IRRD+N S D+E RAQ +IQKLTD + +I+ +L KEK
Sbjct: 121 AEGGRVAVRNIRRDANNDLKALLKDKEISEDDERRAQEEIQKLTDAAVKKIDDVLAAKEK 180
Query: 833 EIL 835
E++
Sbjct: 181 ELM 183
>UNIPROTKB|P0A805 [details] [associations]
symbol:frr "ribosome recycling factor" species:83333
"Escherichia coli K-12" [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0032790 "ribosome disassembly" evidence=IMP]
[GO:0006412 "translation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0043022 EMBL:U70214
GO:GO:0032790 EMBL:D13334 PDB:2RDO PDBsum:2RDO eggNOG:COG0233
KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 EMBL:J05113 EMBL:M69029 PIR:A34495
RefSeq:NP_414714.1 RefSeq:YP_488474.1 PDB:1EK8 PDB:1ISE PDB:1ZN0
PDB:1ZN1 PDB:4GAS PDB:4GD1 PDBsum:1EK8 PDBsum:1ISE PDBsum:1ZN0
PDBsum:1ZN1 PDBsum:4GAS PDBsum:4GD1 ProteinModelPortal:P0A805
SMR:P0A805 DIP:DIP-48120N IntAct:P0A805 MINT:MINT-1308979
SWISS-2DPAGE:P0A805 PaxDb:P0A805 PRIDE:P0A805
EnsemblBacteria:EBESCT00000001100 EnsemblBacteria:EBESCT00000016070
GeneID:12930756 GeneID:946122 KEGG:ecj:Y75_p0168 KEGG:eco:b0172
PATRIC:32115453 EchoBASE:EB0331 EcoGene:EG10335
BioCyc:EcoCyc:EG10335-MONOMER BioCyc:ECOL316407:JW0167-MONOMER
EvolutionaryTrace:P0A805 Genevestigator:P0A805 Uniprot:P0A805
Length = 185
Score = 358 (131.1 bits), Expect = 7.2e-32, P = 7.2e-32
Identities = 69/183 (37%), Positives = 120/183 (65%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+ISDI+K+ + +M ++ K + K+RTGRA+ +LD I V+Y+ T L ++A++T+
Sbjct: 1 MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVE 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
+S T+ I F++ MS ++KAI ++LGLNP G+ I V +PPLT+ERR+++ K+++
Sbjct: 61 DSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGE 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E+ ++++R +RRD+N+ S D++ R+Q D+QKLTD I +I L +KE
Sbjct: 121 AEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEA 180
Query: 833 EIL 835
E++
Sbjct: 181 ELM 183
>TIGR_CMR|GSU_1918 [details] [associations]
symbol:GSU_1918 "ribosome recycling factor" species:243231
"Geobacter sulfurreducens PCA" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:AE017180
GenomeReviews:AE017180_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 RefSeq:NP_952967.1 ProteinModelPortal:P61304
GeneID:2685328 KEGG:gsu:GSU1918 PATRIC:22026701
BioCyc:GSUL243231:GH27-1975-MONOMER Uniprot:P61304
Length = 185
Score = 356 (130.4 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 70/180 (38%), Positives = 119/180 (66%)
Query: 656 DIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSH 715
D+ + K M +++ L+ +KVRTGRAN G+LD I+V ++ + + L ++A + +
Sbjct: 4 DVINDMKSHMEKSVESLRREYQKVRTGRANTGLLDEIRVDFYGNPSPLNQVATLAVPEPR 63
Query: 716 TISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEE 775
TI+IQP+E +M +I+KAI ANLG P+ G +I +S+PPLT+ERR+EIVK +K E+
Sbjct: 64 TITIQPWETKMIPVIEKAILNANLGFTPSNDGKLIRISLPPLTEERRKEIVKSLKKTAED 123
Query: 776 TKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
KI+IR IRRD+ + S D+ RA+ ++Q +T+ ++ +++++L +KEKE++
Sbjct: 124 AKIAIRNIRRDAIDGLKKLEKDKKISEDDLKRAEKEVQDVTNVYVAKVDEVLAHKEKEVM 183
>TIGR_CMR|CBU_1383 [details] [associations]
symbol:CBU_1383 "ribosome recycling factor" species:227377
"Coxiella burnetii RSA 493" [GO:0006412 "translation" evidence=ISS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765
GO:GO:0005737 GO:GO:0006412 EMBL:AE016828 GenomeReviews:AE016828_GR
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
OMA:VMVEYYG ProtClustDB:PRK00083 RefSeq:NP_820372.1
ProteinModelPortal:Q83BV4 SMR:Q83BV4 PRIDE:Q83BV4 GeneID:1209289
KEGG:cbu:CBU_1383 PATRIC:17931511
BioCyc:CBUR227377:GJ7S-1371-MONOMER Uniprot:Q83BV4
Length = 185
Score = 349 (127.9 bits), Expect = 6.7e-31, P = 6.7e-31
Identities = 73/185 (39%), Positives = 118/185 (63%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I+DI ++K +M ++ LK L K+RT RA+ +L++I+V Y+ T L ++A+I +
Sbjct: 1 MINDIINDSKSRMEKSLGSLKTELAKLRTCRAHPSLLEHIKVDYYNVETPLSQVASIAIE 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
N T+SI P+EK M I+KAI +A+LGLNP G +I V +PPLT+ERR+E+ ++++
Sbjct: 61 NPRTLSITPWEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREE 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E +++IR IRR++N S D E RAQ IQKLTD I E++++ KE
Sbjct: 121 AEHARVAIRNIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKEA 180
Query: 833 EILTL 837
+++ +
Sbjct: 181 DLMAV 185
>TIGR_CMR|CBU_1385 [details] [associations]
symbol:CBU_1385 "translation elongation factor Ts"
species:227377 "Coxiella burnetii RSA 493" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE016828 GenomeReviews:AE016828_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 EMBL:AF127534
RefSeq:NP_820374.1 ProteinModelPortal:Q9X5U9 SMR:Q9X5U9
PRIDE:Q9X5U9 GeneID:1209291 KEGG:cbu:CBU_1385 PATRIC:17931515
BioCyc:CBUR227377:GJ7S-1373-MONOMER Uniprot:Q9X5U9
Length = 296
Score = 341 (125.1 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 77/212 (36%), Positives = 122/212 (57%)
Query: 219 VGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK-KILNISNRNAKDGVIAIYIS 277
V ELR +T A +M CKKAL E NG + A ++LR K G K + + A +GVI I IS
Sbjct: 9 VKELRERTGAAVMACKKALQETNGDMEAAIDLLR-KAGDAKAAKRAGKTAAEGVIVIAIS 67
Query: 278 --EKVGSLVEINCETDFVAKNNEFIKFSKKIAKL-ITENTPXXXXXXXXXXXXXXXXTVD 334
+K G + E+N ETDFVA++ F+ F+ K+A+ + E T++
Sbjct: 68 KDQKKGFMAEVNSETDFVARDTNFMAFASKVAERGLAEGVSDVAATLALPIEPNSSSTIE 127
Query: 335 EKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKDVAMHIAA 394
++ K L++RIGENI+IRR ++ + Y H +IGV++ + N K +AMH+AA
Sbjct: 128 DERKALVNRIGENIQIRRVASLSSDGVVGHYSHGGRIGVLLALDVPNPELAKGLAMHVAA 187
Query: 395 MKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
P A+S++Q+ + +EKE + + +AQ+ G+
Sbjct: 188 FNPQAVSANQVSTEFVEKEKEIFLARAQETGK 219
>TIGR_CMR|BA_3962 [details] [associations]
symbol:BA_3962 "ribosome recycling factor" species:198094
"Bacillus anthracis str. Ames" [GO:0006415 "translational
termination" evidence=ISS] [GO:0008135 "translation factor
activity, nucleic acid binding" evidence=ISS] HAMAP:MF_00040
InterPro:IPR002661 Pfam:PF01765 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
OMA:VMVEYYG RefSeq:NP_846205.1 RefSeq:YP_020601.1
RefSeq:YP_029926.1 PDB:4GFQ PDBsum:4GFQ ProteinModelPortal:Q81WL1
SMR:Q81WL1 DNASU:1086824 EnsemblBacteria:EBBACT00000008993
EnsemblBacteria:EBBACT00000015628 EnsemblBacteria:EBBACT00000020750
GeneID:1086824 GeneID:2819578 GeneID:2850618 KEGG:ban:BA_3962
KEGG:bar:GBAA_3962 KEGG:bat:BAS3675 ProtClustDB:PRK00083
BioCyc:BANT260799:GJAJ-3733-MONOMER
BioCyc:BANT261594:GJ7F-3850-MONOMER Uniprot:Q81WL1
Length = 185
Score = 334 (122.6 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 67/179 (37%), Positives = 110/179 (61%)
Query: 657 IKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHT 716
+ K + +KM + L VR GRA+ +LD +QV Y+ T ++++ANIT+ +
Sbjct: 5 VLKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARL 64
Query: 717 ISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEET 776
+ IQP++K I+KAI +A+LGLNP+ G +I ++ P LT+ERR ++VK++K EE
Sbjct: 65 LVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEA 124
Query: 777 KISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
K+++R +RRD N+ + D+ DIQK TDK+I +++++ NKEKEI+
Sbjct: 125 KVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIM 183
>TIGR_CMR|CHY_1784 [details] [associations]
symbol:CHY_1784 "ribosome recycling factor" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006412
"translation" evidence=ISS] [GO:0008135 "translation factor
activity, nucleic acid binding" evidence=ISS] HAMAP:MF_00040
InterPro:IPR002661 Pfam:PF01765 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
RefSeq:YP_360604.1 ProteinModelPortal:Q3AB80 SMR:Q3AB80
STRING:Q3AB80 GeneID:3728266 KEGG:chy:CHY_1784 PATRIC:21276679
BioCyc:CHYD246194:GJCN-1783-MONOMER Uniprot:Q3AB80
Length = 185
Score = 334 (122.6 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 70/185 (37%), Positives = 114/185 (61%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I DI K + M I++LK+ +R GRA +L+ + V+Y+ + ++A I+
Sbjct: 1 MIQDILKEAQDHMQKAIEVLKKEFATMRVGRATPALLEKVVVEYYGTQMPVNQLATISAP 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
+ IQP++K I+KAI +++LG+ PT G++I ++IPPLT+ERR+E+VK+ +
Sbjct: 61 EPRLLVIQPWDKGALGAIEKAILKSDLGITPTNDGSVIRLAIPPLTQERRQELVKVARKK 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
EE +++IR IRRD+N+ S D R Q ++QKLTDKFI +++LL KE
Sbjct: 121 AEEARVAIRNIRRDANDRIKDLEKDKVISEDEGKRGQDEVQKLTDKFIKTVDELLKAKED 180
Query: 833 EILTL 837
EIL++
Sbjct: 181 EILSI 185
>TIGR_CMR|BA_1797 [details] [associations]
symbol:BA_1797 "uridylate kinase" species:198094 "Bacillus
anthracis str. Ames" [GO:0009041 "uridylate kinase activity"
evidence=ISS] [GO:0015949 "nucleobase-containing small molecule
interconversion" evidence=ISS] InterPro:IPR001048
InterPro:IPR011817 InterPro:IPR015963 Pfam:PF00696
PIRSF:PIRSF005650 UniPathway:UPA00159 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008652
Gene3D:3.40.1160.10 SUPFAM:SSF53633 GO:GO:0033862 GO:GO:0044210
HOGENOM:HOG000047187 KO:K09903 HAMAP:MF_01220_B PANTHER:PTHR26059
TIGRFAMs:TIGR02075 RefSeq:NP_844222.1 RefSeq:YP_018435.1
RefSeq:YP_027931.1 PDB:2JJX PDBsum:2JJX ProteinModelPortal:Q81S73
IntAct:Q81S73 DNASU:1086122 EnsemblBacteria:EBBACT00000008266
EnsemblBacteria:EBBACT00000018753 EnsemblBacteria:EBBACT00000020173
GeneID:1086122 GeneID:2814751 GeneID:2849897 KEGG:ban:BA_1797
KEGG:bar:GBAA_1797 KEGG:bat:BAS1665 OMA:EADNIGM
ProtClustDB:PRK14557 BioCyc:BANT260799:GJAJ-1736-MONOMER
BioCyc:BANT261594:GJ7F-1807-MONOMER EvolutionaryTrace:Q81S73
Uniprot:Q81S73
Length = 247
Score = 330 (121.2 bits), Expect = 7.6e-29, P = 7.6e-29
Identities = 73/201 (36%), Positives = 112/201 (55%)
Query: 458 LAIVIGGGNICRGISNKIQNIDRSTADYMGMLATIINSLALFDIL-NKSGIISHVMSAIS 516
++IVIGGGNI RG + IDR AD +G L TIINSL L +L +K+ VM++I
Sbjct: 46 VSIVIGGGNIFRGHLAEEWGIDRVEADNIGTLGTIINSLMLRGVLTSKTNKEVRVMTSIP 105
Query: 517 IEKFLESYIPLNAIKYLEEGKVVIFAGGIGNPFFTTDX-XXXXXXXXXXXXXXXXXXXVD 575
E YI L A+ +L+ G +VIF GG G PF TTD VD
Sbjct: 106 FNAVAEPYIRLRAVHHLDNGYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILVAKQGVD 165
Query: 576 GIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKR 635
G++ SDP SA +Y+K+ +++V+ + +++MD A RD LP VF+ + G ++R
Sbjct: 166 GVFTSDPKHNKSAKMYRKLNYNDVVRQNIQVMDQAALLLARDYNLPAHVFNFDEPGVMRR 225
Query: 636 VIEGKNEGTLVYEIYIMIISD 656
+ G++ GTL+ + +++ +
Sbjct: 226 ICLGEHVGTLINDDASLLVHE 246
>TAIR|locus:2077254 [details] [associations]
symbol:RRF ""ribosome recycling factor, chloroplast
precursor"" species:3702 "Arabidopsis thaliana" [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009817 "defense response to
fungus, incompatible interaction" evidence=IDA] [GO:0005507 "copper
ion binding" evidence=IDA] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0009790 "embryo development" evidence=IMP]
[GO:0032544 "plastid translation" evidence=IMP] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0009073 "aromatic amino
acid family biosynthetic process" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0016226
"iron-sulfur cluster assembly" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019408 "dolichol
biosynthetic process" evidence=RCA] InterPro:IPR002661 Pfam:PF01765
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0042742
GO:GO:0005507 GO:GO:0009658 GO:GO:0009817 GO:GO:0009790
GO:GO:0009579 GO:GO:0032544 EMBL:AL138648 eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982 EMBL:AF372883
EMBL:AY056778 EMBL:AY092982 EMBL:BT002678 IPI:IPI00545948
RefSeq:NP_567141.1 UniGene:At.19134 ProteinModelPortal:Q9M1X0
SMR:Q9M1X0 STRING:Q9M1X0 PaxDb:Q9M1X0 PRIDE:Q9M1X0 ProMEX:Q9M1X0
EnsemblPlants:AT3G63190.1 GeneID:825494 KEGG:ath:AT3G63190
TAIR:At3g63190 HOGENOM:HOG000040143 InParanoid:Q9M1X0 OMA:TREHRES
PhylomeDB:Q9M1X0 ProtClustDB:CLSN2917503 Genevestigator:Q9M1X0
GermOnline:AT3G63190 TIGRFAMs:TIGR00496 Uniprot:Q9M1X0
Length = 275
Score = 321 (118.1 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 78/228 (34%), Positives = 128/228 (56%)
Query: 611 AFSFCRDQKLPIRVFSIIKSG-ALKRVIEGKN--EGTLVYEIYIMIISDIKKNTKQKMLN 667
A SF D KLP+ + G +KR ++ + + EI S I+ + K KM
Sbjct: 48 ACSFKTD-KLPLGAGVNLSGGPVVKRSLQKRLVIRSATIEEIEAEK-SAIETDVKSKMEK 105
Query: 668 TIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFEKEMS 727
TI+ L+ + +RTGR+N MLD I+V+Y+ L IA I+ + ++ +QP++K
Sbjct: 106 TIETLRTSFNSIRTGRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSL 165
Query: 728 SIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDS 787
I+KAI ++LG+ P G++I +S+PPLT +RR+E+ K++ +EE K+++R IRRD+
Sbjct: 166 KAIEKAIVNSDLGVTPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDA 225
Query: 788 NEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
+ S DN D+QKL D ++ +I +L KEKE++
Sbjct: 226 LKSYDKLEKEKKLSEDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELM 273
>TIGR_CMR|CJE_0285 [details] [associations]
symbol:CJE_0285 "ribosome recycling factor" species:195099
"Campylobacter jejuni RM1221" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 RefSeq:YP_178307.1 ProteinModelPortal:Q5HWM8
STRING:Q5HWM8 GeneID:3231047 KEGG:cjr:CJE0285 PATRIC:20042268
BioCyc:CJEJ195099:GJC0-290-MONOMER Uniprot:Q5HWM8
Length = 185
Score = 311 (114.5 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 65/183 (35%), Positives = 110/183 (60%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
++++I K + +++ LK++ +RTG+ N +LD+I V Y+ T L ++A +
Sbjct: 1 MLNEIFNKQKTQSEKSLEALKKDFTTLRTGKVNTHILDHITVDYYGTQTPLNQVATVLAS 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
++ TISI P+EK + I+ AI AN+G+NP G + + PP+T+E+REE VK K +
Sbjct: 61 DASTISITPWEKPLLKTIESAIAAANIGVNPNNDGESVKLFFPPMTREQREENVKQAKAM 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E+ K+SIR IR+D+N+ S D +A ++QKLTD + +I++ + NKE
Sbjct: 121 GEKAKVSIRNIRKDANDAVKKLEKDKAISEDEAKKAYDEVQKLTDTYTTKIDESVKNKES 180
Query: 833 EIL 835
E+L
Sbjct: 181 ELL 183
>TIGR_CMR|CPS_1554 [details] [associations]
symbol:CPS_1554 "translation elongation factor Ts"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000083 GenomeReviews:CP000083_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_268296.1
ProteinModelPortal:Q485G9 SMR:Q485G9 STRING:Q485G9 PRIDE:Q485G9
GeneID:3522589 KEGG:cps:CPS_1554 PATRIC:21466315
BioCyc:CPSY167879:GI48-1635-MONOMER Uniprot:Q485G9
Length = 282
Score = 309 (113.8 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 77/214 (35%), Positives = 116/214 (54%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK-KILNISNRNAKDGVI 272
+ A V ELR +T A +M+CK AL+EA G + A E +R K G+ K + A +G I
Sbjct: 3 ITAAMVKELRERTAAGMMDCKNALVEAEGDMELAIENMR-KNGQAKAAKKAGNIAAEGAI 61
Query: 273 AIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXT 332
I ++ + +LVE+NC+TDFVAK++ F+ F+ ++A
Sbjct: 62 LIKTTDGLAALVEVNCQTDFVAKDDNFLGFANEVAD---------AALASKVTIAELQAQ 112
Query: 333 VDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKDVAMHI 392
+EK L+++IGENI IRR + + NL SY H IGV+V GD ES +K +AMH+
Sbjct: 113 FEEKRITLVTKIGENINIRRVE-YVEGANLASYSHGATIGVVVAGEGDAES-LKHIAMHV 170
Query: 393 AAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
AA KP L+ D +P ++ E + + A G+
Sbjct: 171 AASKPEFLTPDDVPADVVANEKRIQIEMAMNEGK 204
>TIGR_CMR|BA_3964 [details] [associations]
symbol:BA_3964 "translation elongation factor Ts"
species:198094 "Bacillus anthracis str. Ames" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:NP_846207.1
RefSeq:YP_020603.1 RefSeq:YP_029928.1 ProteinModelPortal:Q81WK9
PRIDE:Q81WK9 DNASU:1086812 EnsemblBacteria:EBBACT00000010254
EnsemblBacteria:EBBACT00000015045 EnsemblBacteria:EBBACT00000019672
GeneID:1086812 GeneID:2819542 GeneID:2848103 KEGG:ban:BA_3964
KEGG:bar:GBAA_3964 KEGG:bat:BAS3677 HOGENOM:HOG000220987
BioCyc:BANT260799:GJAJ-3735-MONOMER
BioCyc:BANT261594:GJ7F-3852-MONOMER Uniprot:Q81WK9
Length = 295
Score = 308 (113.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 82/217 (37%), Positives = 118/217 (54%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+ A+ V ELR KT A +M+CKKAL E NG + KA + LR K K ++R A +G+
Sbjct: 3 ITAQMVKELREKTGAGMMDCKKALTETNGDMEKAIDFLREKGIAKAAKKADRIAAEGLTF 62
Query: 274 IYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTV 333
I + G ++E+N ETDFVAKN F K++A + N P V
Sbjct: 63 IETNGNDGLILELNSETDFVAKNEGFQTLIKELAAHLLANKPANVEEAMAQTMENGKK-V 121
Query: 334 DEKCKELISRIGENIKIRRFKLF-KTNNNLI-SYLH-DNKIGVIVEYNGD-NESAVKDVA 389
+E E I++IGE + +RRF++ KT+ + +YLH +IGV+ G +E+A KDVA
Sbjct: 122 EEHINEAIAKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAKDVA 181
Query: 390 MHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
MHIAA+ P + D + + +E E VL Q L E
Sbjct: 182 MHIAAVNPKYIDRDAVTAEEVEHERQ--VLTQQALNE 216
>TIGR_CMR|SO_1632 [details] [associations]
symbol:SO_1632 "ribosome recycling factor" species:211586
"Shewanella oneidensis MR-1" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:AE014299
GenomeReviews:AE014299_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 RefSeq:NP_717243.1 ProteinModelPortal:Q8EGH2
SMR:Q8EGH2 GeneID:1169426 KEGG:son:SO_1632 PATRIC:23522898
Uniprot:Q8EGH2
Length = 185
Score = 308 (113.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 60/183 (32%), Positives = 114/183 (62%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I+DIKK+ +++M + K + KVRTGRA+ +LD+IQV Y+ +T L ++AN+ +
Sbjct: 1 MIADIKKDAQERMGKCVDATKNQMAKVRTGRAHPSLLDSIQVSYYGTMTPLNQVANVGVE 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
++ T+S+ F++ ++KAI ++LGLNP G + + +P LT+ERR++ +K+++
Sbjct: 61 DARTLSVTVFDRSAIQAVEKAIMSSDLGLNPMSAGATLRIPLPALTEERRKDFIKVVRAE 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
E +++IR +RRD+ + D+ R + ++QK TD I +++++L KE
Sbjct: 121 AEGGRVAIRNVRRDAISDVKKLEKAKECTEDDVRRFEDEVQKFTDAHIKKVDEILAAKEI 180
Query: 833 EIL 835
E++
Sbjct: 181 ELM 183
>UNIPROTKB|P0A6P1 [details] [associations]
symbol:tsf species:83333 "Escherichia coli K-12"
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 GO:GO:0016020 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0008270 GO:GO:0003746 EMBL:U70214 SUPFAM:SSF46934 EMBL:D13334
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:V00343 PIR:A03525
RefSeq:NP_414712.1 RefSeq:YP_488472.1 PDB:1EFU PDB:3MMP PDBsum:1EFU
PDBsum:3MMP ProteinModelPortal:P0A6P1 SMR:P0A6P1 DIP:DIP-31835N
IntAct:P0A6P1 MINT:MINT-1273899 PhosSite:P0810442
SWISS-2DPAGE:P0A6P1 PaxDb:P0A6P1 PRIDE:P0A6P1
EnsemblBacteria:EBESCT00000002436 EnsemblBacteria:EBESCT00000016027
GeneID:12931801 GeneID:944866 KEGG:ecj:Y75_p0166 KEGG:eco:b0170
PATRIC:32115449 EchoBASE:EB1026 EcoGene:EG11033
BioCyc:EcoCyc:EG11033-MONOMER BioCyc:ECOL316407:JW0165-MONOMER
EvolutionaryTrace:P0A6P1 Genevestigator:P0A6P1 Uniprot:P0A6P1
Length = 283
Score = 306 (112.8 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 81/219 (36%), Positives = 116/219 (52%)
Query: 212 AFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILR----IKLGKKILNISNRNA 267
A + A V ELR +T A +M+CKKAL EANG + A E +R IK KK N+ A
Sbjct: 2 AEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNV----A 57
Query: 268 KDGVIAIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXX 327
DGVI I G ++E+NC+TDFVAK+ F F+ K+
Sbjct: 58 ADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLD--------AAVAGKITDVE 109
Query: 328 XXXXTVDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKD 387
+E+ L+++IGENI IRR + + L SY H +IGV+V G +E VK
Sbjct: 110 VLKAQFEEERVALVAKIGENINIRRVAALE-GDVLGSYQHGARIGVLVAAKGADEELVKH 168
Query: 388 VAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
+AMH+AA KP + + + +++EKEY + + A Q G+
Sbjct: 169 IAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGK 207
>TIGR_CMR|DET_0374 [details] [associations]
symbol:DET_0374 "ribosome recycling factor" species:243164
"Dehalococcoides ethenogenes 195" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661
Pfam:PF01765 GO:GO:0005737 GO:GO:0006412 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 RefSeq:YP_181120.1 ProteinModelPortal:Q3Z9H9
STRING:Q3Z9H9 GeneID:3230312 KEGG:det:DET0374 PATRIC:21607817
BioCyc:DETH243164:GJNF-374-MONOMER Uniprot:Q3Z9H9
Length = 185
Score = 306 (112.8 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 63/182 (34%), Positives = 117/182 (64%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I++I + +++KM ++ +L + L +RTGR++ ++++I+V+Y T + +A+I
Sbjct: 1 MINEILQKSEKKMAASLDVLSQELSGIRTGRSSPALVEHIKVEYAGVPTPINHLASIAAP 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
+ I+IQP+++ S I+KAI +++LGL P GNII ++IPPL++ERR+E++K++
Sbjct: 61 DPRYITIQPWDRSCLSAIEKAIMKSDLGLMPNNDGNIIRLNIPPLSEERRQEMIKMVSKR 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
EE KI++R +RRD+ + S D+ R +QK+TD FI + ++L +KE
Sbjct: 121 LEEDKIAMRNVRRDAMDEMKKLEKSKEISQDDLKRGSDQLQKITDSFIAKADKLGADKET 180
Query: 833 EI 834
E+
Sbjct: 181 EL 182
>UNIPROTKB|P66734 [details] [associations]
symbol:frr "Ribosome-recycling factor" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006415
"translational termination" evidence=IDA] [GO:0008079 "translation
termination factor activity" evidence=IDA] [GO:0040007 "growth"
evidence=IMP] HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765
GO:GO:0005886 GO:GO:0005737 GO:GO:0040007 GO:GO:0005618
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842581 GO:GO:0008079 eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000040143 TIGRFAMs:TIGR00496 OMA:VMVEYYG
ProtClustDB:PRK00083 PIR:E70924 RefSeq:NP_217398.1
RefSeq:NP_337460.1 RefSeq:YP_006516334.1 PDB:1WQF PDB:1WQG PDB:1WQH
PDBsum:1WQF PDBsum:1WQG PDBsum:1WQH ProteinModelPortal:P66734
SMR:P66734 PRIDE:P66734 EnsemblBacteria:EBMYCT00000002392
EnsemblBacteria:EBMYCT00000072289 GeneID:13317674 GeneID:887464
GeneID:925331 KEGG:mtc:MT2949 KEGG:mtu:Rv2882c KEGG:mtv:RVBD_2882c
PATRIC:18128256 TubercuList:Rv2882c EvolutionaryTrace:P66734
Uniprot:P66734
Length = 185
Score = 304 (112.1 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 62/183 (33%), Positives = 108/183 (59%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+I + + ++KM + + +++L +RTGRAN GM I + Y+ T + ++A+I +
Sbjct: 1 MIDEALFDAEEKMEKAVAVARDDLSTIRTGRANPGMFSRITIDYYGAATPITQLASINVP 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
+ + I+P+E I+ AI ++LG+NPT G +I V++P LT+ERR E+VK K+
Sbjct: 61 EARLVVIKPYEANQLRAIETAIRNSDLGVNPTNDGALIRVAVPQLTEERRRELVKQAKHK 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
EE K+S+R IRR + E D RA+ D+ K T +++ +I++L+ +KE
Sbjct: 121 GEEAKVSVRNIRRKAMEELHRIRKEGEAGEDEVGRAEKDLDKTTHQYVTQIDELVKHKEG 180
Query: 833 EIL 835
E+L
Sbjct: 181 ELL 183
>UNIPROTKB|Q9KPV3 [details] [associations]
symbol:tsf "Elongation factor Ts" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 304 (112.1 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 75/212 (35%), Positives = 116/212 (54%)
Query: 216 AKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIY 275
A V ELR +T A +MECKKAL+E NG + A E +R K + A +G I I
Sbjct: 5 AALVKELRERTGAGMMECKKALVETNGDIELAIENMRKSGAAKAAKKAGNIAAEGTIMIK 64
Query: 276 ISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTVDE 335
E + +LVE+NC+TDFVAK++ F+ F+ ++ T+ +E
Sbjct: 65 EGEGIAALVEVNCQTDFVAKDSNFVAFANQV----TD-----AALASKASVEELQAQFEE 115
Query: 336 KCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKDVAMHIAAM 395
L+++IGENI IRR + + L +Y H ++IGV+V + D E+ +K VAMH+AA
Sbjct: 116 ARVALVAKIGENINIRRVQ-YVEGEALATYRHGDRIGVVVAGSADVET-LKHVAMHVAAS 173
Query: 396 KPIALSSDQIPKKIIEKEYSLAVLKAQQLGEA 427
+P L+ D +P +++ KE + V A G++
Sbjct: 174 RPEFLTPDDVPAEVVAKEREVQVGIAMNEGKS 205
>TIGR_CMR|VC_2259 [details] [associations]
symbol:VC_2259 "elongation factor Ts" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003746 "translation elongation
factor activity" evidence=ISS] [GO:0006414 "translational
elongation" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 PIR:A82100 RefSeq:NP_231890.1
ProteinModelPortal:Q9KPV3 PRIDE:Q9KPV3 DNASU:2613181 GeneID:2613181
KEGG:vch:VC2259 PATRIC:20083561 Uniprot:Q9KPV3
Length = 280
Score = 304 (112.1 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 75/212 (35%), Positives = 116/212 (54%)
Query: 216 AKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIY 275
A V ELR +T A +MECKKAL+E NG + A E +R K + A +G I I
Sbjct: 5 AALVKELRERTGAGMMECKKALVETNGDIELAIENMRKSGAAKAAKKAGNIAAEGTIMIK 64
Query: 276 ISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTVDE 335
E + +LVE+NC+TDFVAK++ F+ F+ ++ T+ +E
Sbjct: 65 EGEGIAALVEVNCQTDFVAKDSNFVAFANQV----TD-----AALASKASVEELQAQFEE 115
Query: 336 KCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKDVAMHIAAM 395
L+++IGENI IRR + + L +Y H ++IGV+V + D E+ +K VAMH+AA
Sbjct: 116 ARVALVAKIGENINIRRVQ-YVEGEALATYRHGDRIGVVVAGSADVET-LKHVAMHVAAS 173
Query: 396 KPIALSSDQIPKKIIEKEYSLAVLKAQQLGEA 427
+P L+ D +P +++ KE + V A G++
Sbjct: 174 RPEFLTPDDVPAEVVAKEREVQVGIAMNEGKS 205
>UNIPROTKB|Q10788 [details] [associations]
symbol:tsf "Elongation factor Ts" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005829 GO:GO:0005886
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0003746 EMBL:BX842581
SUPFAM:SSF46934 eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357
OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 PIR:D70925
RefSeq:NP_217405.1 RefSeq:NP_337468.1 RefSeq:YP_006516342.1
ProteinModelPortal:Q10788 SMR:Q10788 PRIDE:Q10788
EnsemblBacteria:EBMYCT00000001377 EnsemblBacteria:EBMYCT00000071329
GeneID:13317682 GeneID:888187 GeneID:925323 KEGG:mtc:MT2957
KEGG:mtu:Rv2889c KEGG:mtv:RVBD_2889c PATRIC:18128272
TubercuList:Rv2889c Uniprot:Q10788
Length = 271
Score = 290 (107.1 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 75/217 (34%), Positives = 113/217 (52%)
Query: 216 AKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIAIY 275
A V LR T A ++ CK AL E +G KA E LRIK K + + R +G++A
Sbjct: 6 AADVKRLRELTGAGMLACKNALAETDGDFDKAVEALRIKGAKDVGKRAERATAEGLVAA- 64
Query: 276 ISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTVDE 335
K G+L+E+NCETDFVAKN EF + ++ P TV++
Sbjct: 65 ---KDGALIELNCETDFVAKNAEFQTLADQVVAAAAAAKPADVDALKGASIGDK--TVEQ 119
Query: 336 KCKELISRIGENIKIRRFKLFKTNNNLISYLHDNK------IGVIVEYNGDNESAVKDVA 389
EL ++IGE +++RR +F + + +YLH +GV+VEY GD+ +A VA
Sbjct: 120 AIAELSAKIGEKLELRRVAIF--DGTVEAYLHRRSADLPPAVGVLVEYRGDDAAAAHAVA 177
Query: 390 MHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
+ IAA++ LS D +P+ I+ E +A A+ G+
Sbjct: 178 LQIAALRARYLSRDDVPEDIVASERRIAEETARAEGK 214
>TIGR_CMR|CJE_1315 [details] [associations]
symbol:CJE_1315 "translation elongation factor Ts"
species:195099 "Campylobacter jejuni RM1221" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000025 GenomeReviews:CP000025_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_179302.1
ProteinModelPortal:Q5HTT3 STRING:Q5HTT3 GeneID:3231822
KEGG:cjr:CJE1315 PATRIC:20044430
BioCyc:CJEJ195099:GJC0-1341-MONOMER Uniprot:Q5HTT3
Length = 357
Score = 288 (106.4 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 77/228 (33%), Positives = 118/228 (51%)
Query: 212 AFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIK-LGKKILNISNRNAKDG 270
A + A V ELR T A +M+CK AL E NG KA ++LR K LGK ++R A +G
Sbjct: 2 AEITAAMVKELRESTGAGMMDCKNALSETNGDFDKAVQLLREKGLGKAAKK-ADRLAAEG 60
Query: 271 VIAIYISEKVGSLV--EINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXX 328
++++ +S+ S EIN ETDFVAKN++FI +K I N+
Sbjct: 61 LVSVKVSDDFTSATVSEINSETDFVAKNDQFIALTKDTTAHIQSNS--LQSVEELHSSTI 118
Query: 329 XXXTVDEKCKELISRIGENIKIRRFKLFKTN-NNLIS-YLHDN-KIGVIV-------EYN 378
+E K I+ IGEN+ +RRF K N +++ Y+H N ++GV++ E
Sbjct: 119 NGVKFEEYLKSQIATIGENLVVRRFATLKAGANGVVNGYIHTNGRVGVVIAAACDSTEVA 178
Query: 379 GDNESAVKDVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
+ ++ + MHIAAM+P LS + + +E EY V + ++ E
Sbjct: 179 SKSRDLLRQICMHIAAMRPSYLSYEDLDMTFVENEYKALVAELEKENE 226
>TIGR_CMR|SPO_1975 [details] [associations]
symbol:SPO_1975 "translation elongation factor Ts"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003746 "translation
elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:YP_167210.1
ProteinModelPortal:Q5LRZ5 GeneID:3192723 KEGG:sil:SPO1975
PATRIC:23377281 Uniprot:Q5LRZ5
Length = 291
Score = 283 (104.7 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 75/219 (34%), Positives = 113/219 (51%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+ A V ELR T A +M+ KKAL E +G + A + LR K K S R A +G++A
Sbjct: 3 ITAALVKELRDSTGAGMMDAKKALTETDGDMEAAVDWLRTKGLAKAAKKSGRTAAEGLVA 62
Query: 274 IYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTV 333
+ + G VE+N ETDFVAKN++F + KIA T+
Sbjct: 63 VVVEGGKGVAVEVNSETDFVAKNSDFQEMVGKIAAAALAADDVDALLAADLGGKSVADTL 122
Query: 334 DEKCKELISRIGENIKIRRFKLFKTNNNLISYLHD------NKIGVIVEYNGDNESAVKD 387
K I+ IGEN+ +RR + +++Y+H+ KIGV+V G +E+ K
Sbjct: 123 TAK----IATIGENMSVRRLAKLE-GETVVTYVHNAATTGMGKIGVLVAMKGGDEALGKQ 177
Query: 388 VAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
VAMHIAA+ P ALS ++ ++EKE + + A++ G+
Sbjct: 178 VAMHIAAVNPAALSEAEMDPVVVEKEKQVQMDIARESGK 216
>POMBASE|SPAC24C9.10c [details] [associations]
symbol:mrp4 "mitochondrial ribosomal protein subunit S2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000049
"tRNA binding" evidence=ISS] [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005763 "mitochondrial small ribosomal subunit" evidence=ISS]
[GO:0006412 "translation" evidence=ISS] [GO:0032543 "mitochondrial
translation" evidence=NAS] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 PomBase:SPAC24C9.10c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0032543 GO:GO:0000049
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 PIR:T38351
RefSeq:NP_594035.1 ProteinModelPortal:O13970 STRING:O13970
EnsemblFungi:SPAC24C9.10c.1 GeneID:2541569 KEGG:spo:SPAC24C9.10c
HOGENOM:HOG000209871 OMA:NTEARTS OrthoDB:EOG4J14J1 NextBio:20802663
Uniprot:O13970
Length = 263
Score = 195 (73.7 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 37/100 (37%), Positives = 56/100 (56%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+L +G H GH T WNP +I+G R IHII+L++T+ +AI + + G +L
Sbjct: 53 LLSSGAHLGHSTSIWNPYTQPFIYGKREGIHIISLDQTMVYLRRAISVVRSIAKENGIIL 112
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIK 100
F+GT+ + + A RA I RWL GLLTN + ++
Sbjct: 113 FIGTRNGQKDSVVAAAKRARGYHIFDRWLPGLLTNAREVQ 152
Score = 111 (44.1 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 148 IIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAK 200
+ PD + I++ +K A EA K ++P IG++DT+ P + Y IP NDDS +
Sbjct: 178 VFPDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLR 230
Score = 39 (18.8 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 462 IGGGNICRGISNKIQNIDRSTADYMGMLATIINSL 496
+GG +C+ K+ D+ + L I+N L
Sbjct: 155 LGGSILCKDNRGKLIQTDKKPSYVFPDLMVILNPL 189
>TIGR_CMR|SO_1630 [details] [associations]
symbol:SO_1630 "translation elongation factor Ts"
species:211586 "Shewanella oneidensis MR-1" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE014299 GenomeReviews:AE014299_GR SUPFAM:SSF46934
eggNOG:COG0264 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HOGENOM:HOG000220987 RefSeq:NP_717241.1
ProteinModelPortal:Q8EGH4 SMR:Q8EGH4 PRIDE:Q8EGH4 GeneID:1169424
KEGG:son:SO_1630 PATRIC:23522894 Uniprot:Q8EGH4
Length = 283
Score = 273 (101.2 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 67/205 (32%), Positives = 106/205 (51%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+ A V ELR +T A +M+CKKAL E NG + A + +R K + A DG I
Sbjct: 3 ISAAQVKELRERTGAGMMDCKKALEETNGDMELAIDNMRKSGAAKAAKKAGNIAADGTIL 62
Query: 274 IYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTV 333
I E L+E+NC+TDFVAK+ F+ F+ + +
Sbjct: 63 IKNGEGFAVLLEVNCQTDFVAKDANFLGFANAVLDV---------AAASKVTLEDLKAQF 113
Query: 334 DEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGDNESAVKDVAMHIA 393
+E L+++IGENI +RR + + L SY H +IGV+V + D E+ +K +AMH+A
Sbjct: 114 EEARVALVAKIGENINVRRVE-YIDGAKLASYRHGERIGVVVTGDADEET-LKHLAMHVA 171
Query: 394 AMKPIALSSDQIPKKIIEKEYSLAV 418
A KP ++ + +P ++ +E +L +
Sbjct: 172 ASKPEYVNPEDVPADVVAREQALQI 196
>TIGR_CMR|APH_0112 [details] [associations]
symbol:APH_0112 "ribosome recycling factor" species:212042
"Anaplasma phagocytophilum HZ" [GO:0006412 "translation"
evidence=ISS] [GO:0008135 "translation factor activity, nucleic
acid binding" evidence=ISS] InterPro:IPR002661 Pfam:PF01765
GO:GO:0006412 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
ProtClustDB:PRK00083 OMA:CEATTIR RefSeq:YP_504740.1
ProteinModelPortal:Q2GLL1 STRING:Q2GLL1 GeneID:3930282
KEGG:aph:APH_0112 PATRIC:20948788
BioCyc:APHA212042:GHPM-147-MONOMER Uniprot:Q2GLL1
Length = 184
Score = 266 (98.7 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 56/184 (30%), Positives = 102/184 (55%)
Query: 652 MIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITL 711
M I++ +++M T + ++ +RTGR + +LD I V Y+ + KL +++I++
Sbjct: 1 MATGAIRQYAQERMDKTYAMFLNDISGIRTGRVSASLLDGISVSYYGNKVKLNTVSSISV 60
Query: 712 FNSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKN 771
N T+ + ++ + +K AI +N+G T + + + + +P LT + R+ +VK++
Sbjct: 61 -NGRTLLVSLWDASILGEVKSAIEASNMGFGMTCESSTVRLVVPELTNDVRKNLVKMLNK 119
Query: 772 ITEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKE 831
+ EE+K+SIR IRRD+ E S D+ + +IQK+TD FI +I +KE
Sbjct: 120 LAEESKVSIRNIRRDAIERLKSLQDNKEISEDDMHGVSAEIQKITDSFIKKIADAYTSKE 179
Query: 832 KEIL 835
EIL
Sbjct: 180 SEIL 183
>TIGR_CMR|NSE_0945 [details] [associations]
symbol:NSE_0945 "ribosome recycling factor" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0008135
"translation factor activity, nucleic acid binding" evidence=ISS]
HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765 GO:GO:0005737
GO:GO:0006412 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
OMA:VMVEYYG RefSeq:YP_506809.1 ProteinModelPortal:Q2GCI7
STRING:Q2GCI7 PRIDE:Q2GCI7 GeneID:3931454 KEGG:nse:NSE_0945
PATRIC:22681869 ProtClustDB:CLSK2527749
BioCyc:NSEN222891:GHFU-947-MONOMER Uniprot:Q2GCI7
Length = 185
Score = 265 (98.3 bits), Expect = 7.5e-22, P = 7.5e-22
Identities = 51/183 (27%), Positives = 106/183 (57%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
++ D+ K T K+ ++ ++ +LK +R+G ++ +LD + V H +L ++A++++
Sbjct: 1 MLEDVIKETNDKLRSSYEVFLSDLKGIRSGSLSVSILDGVIVSTHMGKLRLNQVASLSVV 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
N+ +S+Q ++K +K AI +NLG+NP ++G+++ + +P LT+ERR+E+VK++K
Sbjct: 61 NNKMLSVQVWDKSTVGAVKDAILTSNLGMNPIVEGSVLRLPVPDLTEERRKELVKVLKKY 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
+ K+++R IRRD+ S ++ + I K+ + I+ + KE
Sbjct: 121 GDRAKVAVRNIRRDAISRIKVLEKAKEISENDMHALLKKIDKIISEEDARIDDAVSKKET 180
Query: 833 EIL 835
+IL
Sbjct: 181 DIL 183
>TIGR_CMR|ECH_0267 [details] [associations]
symbol:ECH_0267 "ribosome recycling factor" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0008135
"translation factor activity, nucleic acid binding" evidence=ISS]
HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006412
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
ProtClustDB:PRK00083 RefSeq:YP_507088.1 ProteinModelPortal:Q2GHJ5
STRING:Q2GHJ5 GeneID:3927666 KEGG:ech:ECH_0267 PATRIC:20576051
OMA:CEATTIR BioCyc:ECHA205920:GJNR-267-MONOMER Uniprot:Q2GHJ5
Length = 185
Score = 262 (97.3 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 55/183 (30%), Positives = 107/183 (58%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLF 712
+IS++K++ K +M ++ + ++ +RTGRA +L+ I V+ + KL I+++++
Sbjct: 1 MISEVKQDAKSRMEKSLSVYLSDIDGIRTGRARTSVLNGIVVETYGGRVKLNTISSVSVS 60
Query: 713 NSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNI 772
++ T+ I+ ++ IK AI +NLG + + I +++P +T++ R+ +VKL+ I
Sbjct: 61 DNKTLMIKVWDSNNIGAIKTAIMNSNLGFGISCEATTIRLTVPDMTQDMRKNLVKLLGKI 120
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEK 832
+E+ ++SIR IRRD + S D+ A +IQK+TD + ++N +KEK
Sbjct: 121 SEDCRVSIRNIRRDIMDRLKVMQDSKEISEDDLRVAGVEIQKITDDIMKKVNDAFTSKEK 180
Query: 833 EIL 835
E+L
Sbjct: 181 ELL 183
>TIGR_CMR|ECH_0515 [details] [associations]
symbol:ECH_0515 "translation elongation factor Ts"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI
ProtClustDB:PRK09377 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 RefSeq:YP_507330.1
ProteinModelPortal:Q2GGV3 STRING:Q2GGV3 GeneID:3928034
KEGG:ech:ECH_0515 PATRIC:20576498
BioCyc:ECHA205920:GJNR-517-MONOMER Uniprot:Q2GGV3
Length = 288
Score = 258 (95.9 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 69/225 (30%), Positives = 109/225 (48%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+D V ELR+ T A + +CK+AL G + KA+ LR + K S ++ DG++A
Sbjct: 3 VDINAVKELRNLTGAGVGDCKEALNSCGGDIEKAKNYLREQGIAKAYKKSTKDVSDGLVA 62
Query: 274 IYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTV 333
++++ G+++E+N ETDFVA+N +F K + L +
Sbjct: 63 VHVNGNQGAILEVNSETDFVARNEKFQKLVLNLVSLANQYAVEDIEDFLKHEYVSGTSIH 122
Query: 334 DEKCKELISRIGENIKIRRFKLFKTNNNLIS-YLHD------NKIGVIV--EYNGDNESA 384
DE I+ IGENI + + N ++ Y+H KIG IV E DN+
Sbjct: 123 DEIMTN-IAVIGENIHLNKIGYLSVNAGVVGGYIHSPVVNNLGKIGAIVALESTADNDKL 181
Query: 385 ---VKDVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
+ +AMHI A +P ALS D + K I++KE + + QL +
Sbjct: 182 NVLARQIAMHIVAARPEALSVDLLDKDILDKEREIIKKQVDQLNK 226
>TIGR_CMR|SPO_1664 [details] [associations]
symbol:SPO_1664 "ribosome recycling factor" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0006412 "translation" evidence=ISS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=ISS] HAMAP:MF_00040 InterPro:IPR002661 Pfam:PF01765
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 HOGENOM:HOG000040143 TIGRFAMs:TIGR00496
OMA:VMVEYYG ProtClustDB:PRK00083 RefSeq:YP_166903.1
ProteinModelPortal:Q5LSV2 GeneID:3193529 KEGG:sil:SPO1664
PATRIC:23376653 Uniprot:Q5LSV2
Length = 187
Score = 257 (95.5 bits), Expect = 5.4e-21, P = 5.4e-21
Identities = 55/174 (31%), Positives = 96/174 (55%)
Query: 662 KQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQP 721
K++M + LK +RTGRA+ ML+ IQV+ + +T + +I + + ++I
Sbjct: 13 KRRMDGAMANLKTEFASLRTGRASGSMLEPIQVEAYGQMTPINQIGTVNVPEPRMVTINV 72
Query: 722 FEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIR 781
++K M ++KAI E+ LG+NP + G II + IP L +ERR E+ K+ E +++IR
Sbjct: 73 WDKSMVGKVEKAIRESGLGINPQLNGTIIMLPIPELNEERRRELTKVAGQYAEHARVAIR 132
Query: 782 KIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
+RRD + D ++ + ++Q+LTDK I ++ L K+ EI+
Sbjct: 133 NVRRDGMDQIKKAKADGISEDDQKFW-EAEVQELTDKMIKVVDAALETKQAEIM 185
>TIGR_CMR|CHY_1786 [details] [associations]
symbol:CHY_1786 "translation elongation factor Ts"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0003746 SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_360606.1 ProteinModelPortal:Q3AB78 SMR:Q3AB78
STRING:Q3AB78 PRIDE:Q3AB78 GeneID:3728651 KEGG:chy:CHY_1786
PATRIC:21276683 OMA:YIHTGAR ProtClustDB:PRK12332
BioCyc:CHYD246194:GJCN-1785-MONOMER Uniprot:Q3AB78
Length = 217
Score = 207 (77.9 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 49/104 (47%), Positives = 65/104 (62%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+ ++ V ELR +T A +M+CK+AL EANG + KA EILR K + R A +GV+
Sbjct: 2 ITSQMVKELRERTGAGMMDCKRALEEANGDMEKAIEILRQKGLAAAAKKAGRIATEGVVE 61
Query: 274 IYI--SEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP 315
YI ++G LVEINCETDFVAK +EF F++ IA I P
Sbjct: 62 AYIHGGGRIGVLVEINCETDFVAKTDEFKSFARDIAMQIAAAKP 105
Score = 67 (28.6 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 332 TVDEKCKELISRIGENIKIRRFKLFKTNNNL 362
TV + E I++IGENI IRRF F+ L
Sbjct: 168 TVKDLLTEKIAKIGENINIRRFVRFELGEGL 198
>TAIR|locus:2082309 [details] [associations]
symbol:AT3G01800 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA] [GO:0019408 "dolichol biosynthetic
process" evidence=RCA] InterPro:IPR002661 Pfam:PF01765
GO:GO:0005739 EMBL:CP002686 GO:GO:0006412 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982 EMBL:BT010432
EMBL:AK176317 EMBL:AK220929 IPI:IPI00527773 RefSeq:NP_186829.3
UniGene:At.43211 ProteinModelPortal:Q6NQM0 SMR:Q6NQM0 STRING:Q6NQM0
PRIDE:Q6NQM0 EnsemblPlants:AT3G01800.1 GeneID:821076
KEGG:ath:AT3G01800 TAIR:At3g01800 InParanoid:Q6NQM0 OMA:SMKSIEH
PhylomeDB:Q6NQM0 ProtClustDB:CLSN2680816 Genevestigator:Q6NQM0
Uniprot:Q6NQM0
Length = 267
Score = 233 (87.1 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 69/248 (27%), Positives = 117/248 (47%)
Query: 587 SAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLV 646
S+++ + F + S L +M F D +P + G K + GT +
Sbjct: 22 SSVVVQSRDFSFISSPNLMMMGGRDLQF--DLSMP-DFLRDSRRGFAKGKKSKDDSGTGM 78
Query: 647 YEIYIMIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKI 706
+ I +K +M I L +L K+RTGRA GMLD+I V+ L +
Sbjct: 79 VDAAPDIGPTVKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHL 138
Query: 707 ANITLFNSHTISIQPFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIV 766
A +++ + T+S+ P++ + ++KAI + LGLNP + G + SIP LTKE + +
Sbjct: 139 ALVSVLDPKTLSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMC 198
Query: 767 KLIKNITEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQL 826
K++ +E K SIR+ R+ + + D R + ++ +LT KF+ +
Sbjct: 199 KIVTKSSEVVKQSIRRARQKALDTIKKAGSSLPK--DEVKRLEKEVDELTKKFVKSAEDM 256
Query: 827 LINKEKEI 834
+KEKEI
Sbjct: 257 CKSKEKEI 264
>TIGR_CMR|GSU_1920 [details] [associations]
symbol:GSU_1920 "translation elongation factor Ts"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:AE017180 GenomeReviews:AE017180_GR SUPFAM:SSF46934
eggNOG:COG0264 HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
ProtClustDB:PRK12332 RefSeq:NP_952969.1 ProteinModelPortal:P61333
SMR:P61333 GeneID:2685331 KEGG:gsu:GSU1920 PATRIC:22026705
OMA:EAREGII BioCyc:GSUL243231:GH27-1977-MONOMER Uniprot:P61333
Length = 216
Score = 194 (73.4 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 47/104 (45%), Positives = 60/104 (57%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+ A V ELR T A +M+CKKAL E NG L +A + LR K + R A +G +
Sbjct: 3 ITAAQVNELRKITGAGLMDCKKALTETNGDLEQAVDYLRKKGLAAASKKAGRAATEGAVG 62
Query: 274 IYISE--KVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP 315
YI K+G LVE+NCETDFVA+N+ F F K IA I +P
Sbjct: 63 SYIHAGGKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASP 106
Score = 116 (45.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 29/73 (39%), Positives = 44/73 (60%)
Query: 364 SYLH-DNKIGVIVEYN--------GDNESA-VKDVAMHIAAMKPIALSSDQIPKKIIEKE 413
SY+H KIGV+VE N DN A VKD+AMHIAA P + +++P +++E+E
Sbjct: 63 SYIHAGGKIGVLVEVNCETDFVARNDNFQAFVKDIAMHIAAASPQYVRREEVPAELLERE 122
Query: 414 YSLAVLKAQQLGE 426
+ KA++ G+
Sbjct: 123 KEIYRAKARETGK 135
Score = 63 (27.2 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 332 TVDEKCKELISRIGENIKIRRFKLFKTNNNL 362
TV + E IS IGEN+ +RRF F L
Sbjct: 169 TVQQFLNETISSIGENMSVRRFARFVLGEGL 199
Score = 47 (21.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 633 LKRVIEGKNEGTLVYEIYIM---IISDIKKNTKQKMLNTIKILKENLKKVRTGRANIG 687
++++IEG+ EI +M + D K +Q + TI + EN+ R R +G
Sbjct: 140 IEKIIEGQIN-KFYAEICLMEQNFVKDPDKTVQQFLNETISSIGENMSVRRFARFVLG 196
>TAIR|locus:2100108 [details] [associations]
symbol:AT3G10030 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA;ISS] [GO:0000956 "nuclear-transcribed mRNA
catabolic process" evidence=RCA] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR001005 InterPro:IPR001048
Pfam:PF00696 SMART:SM00717 GO:GO:0005737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003682 GO:GO:0008652 GO:GO:0016301
Gene3D:3.40.1160.10 SUPFAM:SSF53633 eggNOG:COG0528
HOGENOM:HOG000047187 EMBL:AF375431 EMBL:AY120687 IPI:IPI00535263
RefSeq:NP_566366.1 UniGene:At.28740 ProteinModelPortal:Q94JR1
SMR:Q94JR1 IntAct:Q94JR1 STRING:Q94JR1 PaxDb:Q94JR1 PRIDE:Q94JR1
EnsemblPlants:AT3G10030.1 GeneID:820164 KEGG:ath:AT3G10030
TAIR:At3g10030 InParanoid:Q94JR1 OMA:QINNVKS PhylomeDB:Q94JR1
ProtClustDB:CLSN2684524 Genevestigator:Q94JR1 Uniprot:Q94JR1
Length = 542
Score = 261 (96.9 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 58/193 (30%), Positives = 105/193 (54%)
Query: 458 LAIVIGGGNI-CRGISNKIQNIDRSTADYMGMLATIINSLALFDILNKSGIISHVMSAIS 516
+AIV+G N C +DR+TA ++ M+A+++NS L L K G+ + + +AIS
Sbjct: 344 VAIVVGSRNFFCGSTWVTATGLDRTTAYHISMMASVMNSALLQSSLEKIGVQARLQTAIS 403
Query: 517 IEKFLESYIPLNAIKYLEEGKVVIFAG-G--IGNPFFTTDXXXXXXXXXXXXXXXXXXXX 573
++ E Y A ++L++G+VVIF G G +GNP ++D
Sbjct: 404 VQGVGEPYNRQRATRHLDKGRVVIFGGIGATLGNPLLSSDASAALRAIDINAEAVVKGTN 463
Query: 574 VDGIYNSDPNKCLSAIIYKKITFDEVISKKLEIMDSTAFSFCRDQKLPIRVFSIIKSGAL 633
VDG+Y+ S + ++ I+F ++ S+ L MD+ A +FC + +P+ VF+ +++G +
Sbjct: 464 VDGVYDCHSQD--SNVTFEHISFQDLASRGLTSMDTMALNFCEENSIPVVVFNFLEAGNI 521
Query: 634 KRVIEGKNEGTLV 646
+ + G+ GTL+
Sbjct: 522 TKALCGEQVGTLI 534
Score = 37 (18.1 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 335 EKCKELISRIGENIKIRRFKL 355
E+CK I + + K+ R ++
Sbjct: 209 EQCKNKIDNLKKRYKLERHRM 229
>ZFIN|ZDB-GENE-040704-12 [details] [associations]
symbol:mrrf "mitochondrial ribosome recycling
factor" species:7955 "Danio rerio" [GO:0006412 "translation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002661
InterPro:IPR016000 Pfam:PF01765 ZFIN:ZDB-GENE-040704-12
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40 InterPro:IPR024946
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 CTD:92399 HOGENOM:HOG000007351 HOVERGEN:HBG061516
OrthoDB:EOG4QRH4V PANTHER:PTHR20982:SF4 EMBL:BC074048
IPI:IPI00513547 RefSeq:NP_001002174.1 UniGene:Dr.84906
ProteinModelPortal:Q6GMJ7 SMR:Q6GMJ7 STRING:Q6GMJ7 GeneID:431721
KEGG:dre:431721 InParanoid:Q6GMJ7 NextBio:20830957
ArrayExpress:Q6GMJ7 Uniprot:Q6GMJ7
Length = 257
Score = 228 (85.3 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 64/235 (27%), Positives = 122/235 (51%)
Query: 607 MDSTAFSFCRD-QKLPIRVFSIIKSGALKRVIEGKNEG-TLVYEIYIMIISDI--KKNTK 662
+ S+ SF + P+ + + + A K+ + K +G T I ++ DI + K
Sbjct: 26 LTSSRVSFLPQVSQCPVALPNYARHYATKKS-KAKAKGQTAKVNINAALVEDIISLEEVK 84
Query: 663 QKMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSH--TISIQ 720
+ M + LK++ + + R + G LD+I V + L ++ I++ + +++
Sbjct: 85 EDMAAVLAALKDDFSRNLSVRTSPGALDHITVTTKDGKFPLNQLGQISMKSPQLLVVNMT 144
Query: 721 PFEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISI 780
F + M ++ + A+ E+++GLNP ++G II V +P +T+E RE +VKL K + ++K S+
Sbjct: 145 GFPEAMVAVTR-ALRESSMGLNPEVEGTIIRVPVPKVTREHRENLVKLAKQFSNKSKDSL 203
Query: 781 RKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
R++R SN S D + + IQ++TD F +I++ L K KE+L
Sbjct: 204 RRVR--SNAISQVKKSKDAVSDDTIHLIEKQIQQMTDSFTADIDKQLATKTKELL 256
>TIGR_CMR|NSE_0947 [details] [associations]
symbol:NSE_0947 "translation elongation factor Ts"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005737 GO:GO:0003746 SUPFAM:SSF46934 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0264 HOGENOM:HOG000220986
KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
RefSeq:YP_506811.1 STRING:Q2GCI5 GeneID:3932029 KEGG:nse:NSE_0947
PATRIC:22681873 BioCyc:NSEN222891:GHFU-949-MONOMER Uniprot:Q2GCI5
Length = 290
Score = 225 (84.3 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 69/236 (29%), Positives = 122/236 (51%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKI-LNISNRNAKDGVI 272
++ + + L +T A ++ CK+AL EA+G L++A EIL+ +LG + + +NR A+DGV+
Sbjct: 4 INLEDLKSLSKETSAGLVHCKQALSEAHGDLTRAREILK-ELGHAVSVKKANRGARDGVV 62
Query: 273 AIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXT 332
S K G ++E+NCETDFVA+N +F +F++ + +
Sbjct: 63 GALSSGKFGVILELNCETDFVARNEKFQQFAQSVLEAACA-AKVKSVEECLSTPLPGGQK 121
Query: 333 VDEKCKELISRIGENIKIRRFKLFKTNNN-LIS-YLHDN------KIGVIVEYNGDNE-- 382
V + E ++ ENI + R ++ + + L+ Y+H+ KIGV V + +
Sbjct: 122 VRDAIVEQVAVFRENIVLSRCVTYEVSQSGLLGVYVHNKYTENLGKIGVAVAVVSEADPS 181
Query: 383 --SAV-KDVAMHIAAMKPIALSSDQIPKKIIEKE---YSLAVL-KAQQLGEALMKG 431
S V KD+A+ + + P A+ +IP ++E E Y+L V K + E ++ G
Sbjct: 182 FLSTVAKDIAIQVMSECPCAIDVARIPPNLLESEKHKYNLEVEGKPASVAEKIIAG 237
>UNIPROTKB|Q0VCQ4 [details] [associations]
symbol:MRRF "Ribosome-recycling factor, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002661
Pfam:PF01765 GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40
InterPro:IPR024946 eggNOG:COG0233 KO:K02838 InterPro:IPR023584
SUPFAM:SSF55194 PANTHER:PTHR20982 EMBL:BC120054 IPI:IPI00714526
RefSeq:NP_001069775.1 UniGene:Bt.21335 ProteinModelPortal:Q0VCQ4
SMR:Q0VCQ4 STRING:Q0VCQ4 PRIDE:Q0VCQ4 GeneID:614013 KEGG:bta:614013
CTD:92399 HOGENOM:HOG000007351 HOVERGEN:HBG061516 InParanoid:Q0VCQ4
OrthoDB:EOG4QRH4V NextBio:20898894 Uniprot:Q0VCQ4
Length = 262
Score = 222 (83.2 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 64/219 (29%), Positives = 109/219 (49%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
+P+R F+ K+ A +GK + + ++ DI + ++M + I+ LK+N
Sbjct: 50 VPVRHFATKKAKA-----KGKGQSQTRMNLNTALVEDIINLEEVDEEMKSVIEALKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K R + G LDNI V + L +I+ I++ + I + E ++ KAI E
Sbjct: 105 KTVNIRTSPGALDNITVVTADGKLPLNQISQISMKSPQLILVNMASFPECTAAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP +T+E RE +VKL K T + K S+RK+R +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKDSLRKVR--TNAINKVKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S D + I ++ D + E+++ L K KE+L
Sbjct: 223 KDKASEDTIRLIEKQISQMADDTVAELDRHLAVKTKELL 261
>UNIPROTKB|Q96E11 [details] [associations]
symbol:MRRF "Ribosome-recycling factor, mitochondrial"
species:9606 "Homo sapiens" [GO:0006412 "translation" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0032790 "ribosome
disassembly" evidence=IDA] InterPro:IPR002661 Pfam:PF01765
GO:GO:0005739 GO:GO:0006412 EMBL:CH471090 Gene3D:3.30.1360.40
InterPro:IPR024946 GO:GO:0032790 EMBL:AL162424 eggNOG:COG0233
KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
CTD:92399 HOVERGEN:HBG061516 OrthoDB:EOG4QRH4V EMBL:AK291603
EMBL:AK298046 EMBL:AK291809 EMBL:AK292790 EMBL:AK300718
EMBL:AK316266 EMBL:BC013049 EMBL:BC053604 IPI:IPI00030596
IPI:IPI00061108 IPI:IPI00412392 IPI:IPI00514034 IPI:IPI00555800
IPI:IPI00556454 IPI:IPI00556600 RefSeq:NP_001166983.1
RefSeq:NP_620132.1 RefSeq:NP_954646.1 UniGene:Hs.368011
ProteinModelPortal:Q96E11 SMR:Q96E11 IntAct:Q96E11 STRING:Q96E11
PhosphoSite:Q96E11 DMDM:62901043 PaxDb:Q96E11 PRIDE:Q96E11
DNASU:92399 Ensembl:ENST00000297908 Ensembl:ENST00000344641
Ensembl:ENST00000373723 Ensembl:ENST00000373724
Ensembl:ENST00000373727 Ensembl:ENST00000373728
Ensembl:ENST00000373729 Ensembl:ENST00000373730
Ensembl:ENST00000394315 Ensembl:ENST00000441707
Ensembl:ENST00000467864 Ensembl:ENST00000470366
Ensembl:ENST00000489572 Ensembl:ENST00000546115 GeneID:92399
KEGG:hsa:92399 UCSC:uc010mwa.3 UCSC:uc011lyq.2 UCSC:uc022bmy.1
GeneCards:GC09P125026 HGNC:HGNC:7234 MIM:604602 neXtProt:NX_Q96E11
PharmGKB:PA31029 InParanoid:Q96E11 OMA:VMVEYYG PhylomeDB:Q96E11
GenomeRNAi:92399 NextBio:77750 Bgee:Q96E11 Genevestigator:Q96E11
GermOnline:ENSG00000148187 Uniprot:Q96E11
Length = 262
Score = 221 (82.9 bits), Expect = 3.9e-17, P = 3.9e-17
Identities = 64/219 (29%), Positives = 108/219 (49%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
+P+R F+ K+ A +GK + I ++ DI + ++M + I+ LK+N
Sbjct: 50 VPVRHFATKKAKA-----KGKGQSQTRVNINAALVEDIINLEEVNEEMKSVIEALKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K R + G LD I V + L +I+ I++ + I + E ++ KAI E
Sbjct: 105 KTLNIRTSPGSLDKIAVVTADGKLALNQISQISMKSPQLILVNMASFPECTAAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP +T+E RE +VKL K T + K S+RK+R +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNTNKAKDSLRKVR--TNSMNKLKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S D + I ++ D + E+++ L K KE+L
Sbjct: 223 KDTVSEDTIRLIEKQISQMADDTVAELDRHLAVKTKELL 261
>UNIPROTKB|J9P265 [details] [associations]
symbol:MRRF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002661 Pfam:PF01765 GO:GO:0006412 Gene3D:3.30.1360.40
InterPro:IPR024946 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 OMA:TREHRES CTD:92399
GeneTree:ENSGT00390000005084 EMBL:AAEX03006907 RefSeq:XP_537859.2
ProteinModelPortal:J9P265 Ensembl:ENSCAFT00000043300 GeneID:480739
KEGG:cfa:480739 Uniprot:J9P265
Length = 262
Score = 217 (81.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 64/219 (29%), Positives = 108/219 (49%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
LP+R F+ K+ A +GK + + ++ DI + ++M + ++ LK+N
Sbjct: 50 LPVRHFATKKAKA-----KGKGQFQTRVNLNAALVEDIINLEEVDEEMKSVMEALKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K + R + G LD I V L +I I++ + H I + E ++ KAI E
Sbjct: 105 KTISIRTSPGSLDRITVVTANGKLALNQIGQISMKSPHLILVNMASFPECTAAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP +T+E RE +VKL K T + K S+RK+R +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPKVTREHREMMVKLAKQNTNKAKDSLRKVR--TNAMNKLKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S D + I ++ D + E+++ L K KE+L
Sbjct: 223 KDKVSEDTIRLIEKQISQMADDTVAELDRHLAVKTKELL 261
>TIGR_CMR|APH_0398 [details] [associations]
symbol:APH_0398 "translation elongation factor Ts"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0006414
"translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746
EMBL:CP000235 GenomeReviews:CP000235_GR SUPFAM:SSF46934
RefSeq:YP_505003.1 ProteinModelPortal:Q2GKU8 STRING:Q2GKU8
GeneID:3930974 KEGG:aph:APH_0398 PATRIC:20949404 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 OMA:YLHGTRI ProtClustDB:PRK09377
BioCyc:APHA212042:GHPM-426-MONOMER Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 Uniprot:Q2GKU8
Length = 287
Score = 215 (80.7 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 63/226 (27%), Positives = 111/226 (49%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
+D + + ELR T A I +CK+AL +G + KA E LR K K S+R+ DG++A
Sbjct: 3 IDVEVIKELRQITGAGIGDCKEALESCSGDMDKAREYLREKGLSKAYKKSHRDVADGLVA 62
Query: 274 IYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXXXXXXXXXXXXXXXTV 333
++ VG+++++ ETDFVA+N +F + + + + V
Sbjct: 63 VFAEGDVGAILKLGSETDFVARNEKFRSLALGLVRGLYGY--GVEDLEGFSASSYDGSRV 120
Query: 334 DEKCKELISRIGENIKIRRFKLFKTNN-NLI-SYLH---DNKIG-----VIVE---YNGD 380
++ + +GEN+ + K + +I SY+H +G V++E ++ +
Sbjct: 121 ADEIVAAAAVLGENVVLSGVGFVKLSGPGVIGSYVHGMVSEGLGKAAALVVLEGGPHSDE 180
Query: 381 NESAVKDVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGE 426
S K +AMHI A KP ALS D + ++++E L + + LG+
Sbjct: 181 LASFAKQLAMHIVAAKPEALSIDTLSSDVVDRERELVARQVEALGK 226
>TIGR_CMR|DET_0376 [details] [associations]
symbol:DET_0376 "translation elongation factor Ts,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003746 "translation elongation factor activity" evidence=ISS]
[GO:0006414 "translational elongation" evidence=ISS] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 GO:GO:0005737 GO:GO:0003746 EMBL:CP000027
GenomeReviews:CP000027_GR SUPFAM:SSF46934 eggNOG:COG0264
HOGENOM:HOG000220986 KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 ProtClustDB:PRK12332 OMA:EAREGII
RefSeq:YP_181122.1 ProteinModelPortal:Q3Z9H7 STRING:Q3Z9H7
GeneID:3230302 KEGG:det:DET0376 PATRIC:21607821
BioCyc:DETH243164:GJNF-376-MONOMER Uniprot:Q3Z9H7
Length = 167
Score = 192 (72.6 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 40/104 (38%), Positives = 64/104 (61%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISNRNAKDGVIA 273
++A+ + ELR K A +MEC+ AL+++NG + KA+EILR K K + R G++
Sbjct: 3 INAEQIKELREKCGAGVMECRNALMDSNGNVEKAQEILREKGLVKAAKKAERETVQGIVE 62
Query: 274 IYISE--KVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP 315
YI ++G+LVE+NCETDFVA+ + F + + +A + P
Sbjct: 63 SYIHTQGRIGALVELNCETDFVARTDAFKELAHNLAMQVAAMCP 106
Score = 45 (20.9 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 13/51 (25%), Positives = 25/51 (49%)
Query: 637 IEGKNEGTLVYEIYIMIISDIKKNTKQKMLNTIKILKENLKKVRTGRANIG 687
+E +N L+ + YI D+ K ++ T+ + EN++ R R +G
Sbjct: 120 VEAEN-ACLLLQPYI---KDLSKTINGLIIETVAKVGENIRLKRFARFELG 166
>MGI|MGI:1915121 [details] [associations]
symbol:Mrrf "mitochondrial ribosome recycling factor"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412
"translation" evidence=IEA] [GO:0032790 "ribosome disassembly"
evidence=ISO] InterPro:IPR002661 Pfam:PF01765 MGI:MGI:1915121
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40 InterPro:IPR024946
eggNOG:COG0233 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 OMA:TREHRES CTD:92399 HOGENOM:HOG000007351
HOVERGEN:HBG061516 OrthoDB:EOG4QRH4V GeneTree:ENSGT00390000005084
EMBL:AK010018 EMBL:AK032371 EMBL:BX293557 EMBL:BC019787
IPI:IPI00109501 RefSeq:NP_080698.1 UniGene:Mm.378232 PDB:1WIH
PDBsum:1WIH ProteinModelPortal:Q9D6S7 SMR:Q9D6S7 STRING:Q9D6S7
PaxDb:Q9D6S7 PRIDE:Q9D6S7 Ensembl:ENSMUST00000028250 GeneID:67871
KEGG:mmu:67871 UCSC:uc008jlj.2 InParanoid:B1B055
EvolutionaryTrace:Q9D6S7 NextBio:325787 Bgee:Q9D6S7 CleanEx:MM_MRRF
Genevestigator:Q9D6S7 GermOnline:ENSMUSG00000026887 Uniprot:Q9D6S7
Length = 262
Score = 211 (79.3 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
+P+R F+ K+ A +GK + + ++ DI + + M + ++ LK+N
Sbjct: 50 VPVRHFATKKAKA-----KGKGQPQARVTVNRALVEDIISLEEVDEDMKSVVEALKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K R G LD+I V + L +I I++ + I + E ++ KAI E
Sbjct: 105 KTLNIRTAPGSLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP +T+E RE +VKL K T + K ++RK+R +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVR--TNAMNKLKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S D + I ++ D + E++Q L K KE+L
Sbjct: 223 KDKTSEDTIRLIEKQISQMADDTVAELDQHLAAKTKELL 261
>DICTYBASE|DDB_G0268518 [details] [associations]
symbol:DDB_G0268518 "Ribosome-recycling factor,
mitochondrial" species:44689 "Dictyostelium discoideum" [GO:0006412
"translation" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002661 dictyBase:DDB_G0268518
Pfam:PF01765 GO:GO:0006412 EMBL:AAFI02000003 eggNOG:COG0233
KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
RefSeq:XP_647294.1 ProteinModelPortal:Q55G90 STRING:Q55G90
EnsemblProtists:DDB0216552 GeneID:8616100 KEGG:ddi:DDB_G0268518
InParanoid:Q55G90 OMA:IKQVNTI ProtClustDB:CLSZ2846946
Uniprot:Q55G90
Length = 263
Score = 210 (79.0 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 51/167 (30%), Positives = 91/167 (54%)
Query: 668 TIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFEKEMS 727
TI+ + L +R GR +L+ I V+ L +A IT+ +S T++I ++ +
Sbjct: 98 TIEYVSRELGNIRFGRVGPELLERINVETPSGNLLLPHMAMITIKDSLTLNITLYDSSLL 157
Query: 728 SIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDS 787
S +++A+ + LGLNP I VS+P T++ R++++K + I+E+ K+SIR+ R+D
Sbjct: 158 SNVERALTNSGLGLNPQTFDTTIRVSLPKPTQDLRQKLIKQVNTISEDAKVSIRRHRKDG 217
Query: 788 NEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEI 834
+ D+E + +IQK+TD +I I ++ K KEI
Sbjct: 218 MDILKRYKLTK----DDEKTLEKNIQKITDDYIKSITKITETKLKEI 260
>UNIPROTKB|F1SLQ7 [details] [associations]
symbol:LOC100515005 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR002661 Pfam:PF01765
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40 InterPro:IPR024946
KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
OMA:TREHRES GeneTree:ENSGT00390000005084 EMBL:CU041257
RefSeq:XP_003480647.1 Ensembl:ENSSSCT00000006083 GeneID:100515005
KEGG:ssc:100515005 Uniprot:F1SLQ7
Length = 262
Score = 208 (78.3 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 59/205 (28%), Positives = 98/205 (47%)
Query: 634 KRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLKKVRTGRANIGMLDN 691
K +GK + + ++ DI + ++M + I+ LK+N K R + G LD
Sbjct: 59 KAKAKGKGQSQTRMNLNTALVEDIISLEEVDEEMKSVIEALKDNFNKTVNIRTSPGSLDQ 118
Query: 692 IQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINEANLGLNPTIQGNII 750
I V + L +I I++ + I + E ++ KAI E+ + LNP ++G +I
Sbjct: 119 ITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRESGMNLNPDVEGTLI 178
Query: 751 YVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQY 810
V IP +T+E RE +VKL K T + K S+RK+R +N S D +
Sbjct: 179 RVPIPKVTREHREMLVKLAKQNTNKAKESLRKVR--TNAMNKLKKSKDKASEDTLRLIEK 236
Query: 811 DIQKLTDKFILEINQLLINKEKEIL 835
I ++ D + E+ + L K KE+L
Sbjct: 237 QISQMADDTVAELERHLAVKTKELL 261
>RGD|1305897 [details] [associations]
symbol:Mrrf "mitochondrial ribosome recycling factor"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0032790 "ribosome disassembly" evidence=ISO] InterPro:IPR002661
Pfam:PF01765 RGD:1305897 GO:GO:0005739 GO:GO:0006412
Gene3D:3.30.1360.40 InterPro:IPR024946 eggNOG:COG0233 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982 OMA:TREHRES
CTD:92399 HOGENOM:HOG000007351 HOVERGEN:HBG061516 OrthoDB:EOG4QRH4V
GeneTree:ENSGT00390000005084 EMBL:BC085779 IPI:IPI00372124
RefSeq:NP_001008355.1 UniGene:Rn.105234 ProteinModelPortal:Q5RKI9
SMR:Q5RKI9 STRING:Q5RKI9 PhosphoSite:Q5RKI9 PRIDE:Q5RKI9
Ensembl:ENSRNOT00000033047 GeneID:311903 KEGG:rno:311903
UCSC:RGD:1305897 InParanoid:Q5RKI9 NextBio:664438
Genevestigator:Q5RKI9 GermOnline:ENSRNOG00000025997 Uniprot:Q5RKI9
Length = 262
Score = 208 (78.3 bits), Expect = 9.8e-16, P = 9.8e-16
Identities = 62/219 (28%), Positives = 106/219 (48%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
+P+R F+ K+ A +GK + I ++ DI + + M + ++ LK+N
Sbjct: 50 VPVRQFATKKAKA-----KGKGQPQARVNINTALVEDIISLEEVDEDMKSVMEALKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K R G LD+I V + L +I I++ + I + E ++ KAI E
Sbjct: 105 KTLNIRTAPGSLDHITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP +T+E RE +VKL K T + K ++RK+R +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVR--TNAMNKLKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S D + I ++ D + E+++ L K KE+L
Sbjct: 223 KDKTSEDTIRLIEKQISQMADDTVAELDRHLAAKTKELL 261
>ASPGD|ASPL0000014062 [details] [associations]
symbol:AN4251 species:162425 "Emericella nidulans"
[GO:0006412 "translation" evidence=IEA] [GO:0005763 "mitochondrial
small ribosomal subunit" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001865
InterPro:IPR005706 Pfam:PF00318 PRINTS:PR00395 GO:GO:0006412
EMBL:BN001302 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011
HOGENOM:HOG000209871 EnsemblFungi:CADANIAT00004405 OMA:HECGLNN
Uniprot:C8V427
Length = 332
Score = 163 (62.4 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+L H GH T WNP+ S YIFG R IHII+L+ T +A + + ++ G +L
Sbjct: 108 LLANQTHLGHSTSRWNPQNSRYIFGIREGIHIISLDITAAYLRRAAKVVEEVAARGGLIL 167
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTI 99
F GT+ + ++ A + I +RW+ G LTN + I
Sbjct: 168 FAGTRPGQKRIVVRAAELSKGYHIFERWIPGSLTNGEQI 206
Score = 103 (41.3 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 150 PDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIAL 204
PD + ++ ++ + E N+P IG++DT+ P + Y IP NDDS +S+A+
Sbjct: 237 PDLVICLNPLENEPLLHECGLNNVPTIGIIDTDADPTRVTYPIPANDDSLRSVAV 291
>UNIPROTKB|E1BQ58 [details] [associations]
symbol:MRRF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006412 "translation" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002661 InterPro:IPR016000
Pfam:PF01765 GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40
InterPro:IPR024946 KO:K02838 InterPro:IPR023584 SUPFAM:SSF55194
PANTHER:PTHR20982 OMA:TREHRES CTD:92399
GeneTree:ENSGT00390000005084 PANTHER:PTHR20982:SF4
EMBL:AADN02026362 IPI:IPI00572512 RefSeq:XP_003642346.1
RefSeq:XP_415395.1 UniGene:Gga.7262 Ensembl:ENSGALT00000002038
GeneID:417110 KEGG:gga:417110 NextBio:20820466 Uniprot:E1BQ58
Length = 259
Score = 201 (75.8 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 58/207 (28%), Positives = 99/207 (47%)
Query: 632 ALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLKKVRTGRANIGML 689
A K+ +GK + I ++ DI + T M ++ LKE+ + R + G L
Sbjct: 55 ATKKA-KGKGQTQAKVNISAALVEDIINLEETNTDMQAVVEALKEDFNRNLNVRTSQGAL 113
Query: 690 DNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINEANLGLNPTIQGN 748
D+I V + L ++ I+ + I + E ++ KAI E+ + LNP + G
Sbjct: 114 DHIIVTTKDGKFPLNQLGQISQKSPQLIVVNMTSFPESTAAAMKAIRESGMNLNPEVDGT 173
Query: 749 IIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRA 808
+I V +P +T+E RE + KL K T ++K ++RK+R S S D +
Sbjct: 174 LIRVPVPKVTREHRESLAKLAKQSTNKSKEALRKVR--SKSVNQVKKFKSKVSEDTIWLL 231
Query: 809 QYDIQKLTDKFILEINQLLINKEKEIL 835
+ IQ++ D E+++LL K KE+L
Sbjct: 232 EKQIQQMADSAAAEMDKLLAAKTKELL 258
>TAIR|locus:2136158 [details] [associations]
symbol:AT4G11120 species:3702 "Arabidopsis thaliana"
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006414
"translational elongation" evidence=IEA;ISS] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01127 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161531 GO:GO:0003746
SUPFAM:SSF46934 EMBL:AF080120 EMBL:AL049876 eggNOG:COG0264
HOGENOM:HOG000220986 OMA:YLHGTRI Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116 EMBL:BT015741
EMBL:BT020174 IPI:IPI00518106 PIR:T08191 RefSeq:NP_192850.2
UniGene:At.3293 ProteinModelPortal:Q5XF75 SMR:Q5XF75 STRING:Q5XF75
PaxDb:Q5XF75 PRIDE:Q5XF75 EnsemblPlants:AT4G11120.1 GeneID:826713
KEGG:ath:AT4G11120 GeneFarm:4380 TAIR:At4g11120 InParanoid:Q5XF75
PhylomeDB:Q5XF75 ProtClustDB:CLSN2680955 Genevestigator:Q5XF75
Uniprot:Q5XF75
Length = 395
Score = 159 (61.0 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 38/99 (38%), Positives = 64/99 (64%)
Query: 219 VGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNI-SNRNAKDGVIAIYIS 277
+ +LR +T API + K +L+E N L A++ LR K GK + + S+R A +G++A+ +
Sbjct: 78 IKQLRERTSAPIKDVKASLVECNWDLEAAQKDLR-KRGKVLASKKSSRTAAEGMLAVAQN 136
Query: 278 EKVGSLVEINCETDFVAKNNEFIKFSKKIAK--LITENT 314
E +++E+NCETDFVA+N F + +AK L+ E++
Sbjct: 137 EGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESS 175
Score = 109 (43.4 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 34/114 (29%), Positives = 62/114 (54%)
Query: 332 TVDEKCKELISRIGENIKIRR-FKLFKTNNNLIS-YLHDN------KI-GVI-VEYNGDN 381
TV E+ + +GEN+K RR F + K++ ++S YLH + +I G++ +E G+N
Sbjct: 207 TVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVLSAYLHTSPQPGLGRIAGIVSLEVEGEN 266
Query: 382 ES--AVK----DVAMHIAAMKPIALSSDQIPKKIIEKEYSLAVLKAQQLGEALM 429
A++ ++AMH+ A KP+ LS D + + + E + +A+ G+ M
Sbjct: 267 TQLEAIQRVGSELAMHVVAAKPLFLSKDLVSSEAMANEREILKSQAESTGKNQM 320
>UNIPROTKB|F1PHF1 [details] [associations]
symbol:MRPS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 GeneTree:ENSGT00390000017382 EMBL:AAEX03006806
Ensembl:ENSCAFT00000031602 Uniprot:F1PHF1
Length = 337
Score = 145 (56.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 38/114 (33%), Positives = 58/114 (50%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ A VH GH+ + M YIFG R II+LE+T + A+ + + + KG +L
Sbjct: 83 LFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTAVHLQLALNFTAHVAYRKGIIL 142
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFI 113
FV RQ +I A G + R+ GGLLTN + S+ RL ++ +F+
Sbjct: 143 FVSRNRQFSHLIETTAQDCG-EYAHTRYFKGGLLTNSSLLLGSMVRLPDLIIFL 195
Score = 117 (46.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
AV +A K++IP +G+VDTN +P I Y IPGNDDS ++ L+ +
Sbjct: 207 AVRDAAKMHIPTVGIVDTNCNPCLITYPIPGNDDSPPAVHLFCR 250
>UNIPROTKB|G4NGF2 [details] [associations]
symbol:MGG_04331 "37S ribosomal protein MRP4"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 GO:GO:0006412
GO:GO:0003735 EMBL:CM001236 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 TIGRFAMs:TIGR01011 KO:K02967
RefSeq:XP_003719476.1 ProteinModelPortal:G4NGF2
EnsemblFungi:MGG_04331T0 GeneID:2677383 KEGG:mgr:MGG_04331
Uniprot:G4NGF2
Length = 398
Score = 160 (61.4 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 30/95 (31%), Positives = 51/95 (53%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
++ + H GH WNP + +I+G R IHII+LE+T +A R + ++ F G +L
Sbjct: 142 LMASQCHMGHHKSLWNPANARFIYGVRQDIHIISLEQTAAHLRRAARLVEEVAFCGGLIL 201
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTN 95
FVGT++ ++ A + + +W G +TN
Sbjct: 202 FVGTRQGQMEIVTRAAELSRSCHLFNKWTPGTITN 236
Score = 98 (39.6 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 148 IIPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIAL 204
I PD + +++ + + E IP IGV+DTN + Y IP NDDS +S+A+
Sbjct: 269 ITPDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAV 325
>UNIPROTKB|P82923 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
HOGENOM:HOG000071892 eggNOG:COG0052 EMBL:BC146028 IPI:IPI00700022
RefSeq:NP_001092347.1 UniGene:Bt.28838 ProteinModelPortal:P82923
IntAct:P82923 STRING:P82923 PRIDE:P82923 Ensembl:ENSBTAT00000007473
GeneID:505681 KEGG:bta:505681 CTD:51116
GeneTree:ENSGT00390000017382 HOVERGEN:HBG028633 InParanoid:P82923
OMA:YAHTRYW OrthoDB:EOG4XWFZM NextBio:20867261 Uniprot:P82923
Length = 293
Score = 132 (51.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ A VH GH+ + M YIFG R II+LE+T + A+ + + F G +L
Sbjct: 73 LFNARVHLGHKAGCRHRFMEPYIFGSRLGQDIIDLEQTATHLQLALNFTAHVAFRGGIIL 132
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFI 113
FV RQ +I + A G + R+ GGLLTN + + RL ++ +F+
Sbjct: 133 FVSRARQFSHLIESTARSCG-EYAHTRYFKGGLLTNAPLLLGARVRLPDLIIFL 185
Score = 119 (46.9 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
AV +A K++IP +GVVDTN +P I Y +PGNDDS ++ L+ + A AK
Sbjct: 197 AVRDAAKMSIPTVGVVDTNCNPCLITYPVPGNDDSPPAVQLFCQLFQTAVTRAK 250
>FB|FBgn0035980 [details] [associations]
symbol:CG4447 species:7227 "Drosophila melanogaster"
[GO:0006412 "translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR002661 InterPro:IPR016000 Pfam:PF01765
GO:GO:0005739 GO:GO:0006412 Gene3D:3.30.1360.40 InterPro:IPR024946
eggNOG:COG0233 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
EMBL:AY069172 ProteinModelPortal:Q8T0M6 SMR:Q8T0M6 STRING:Q8T0M6
PaxDb:Q8T0M6 PRIDE:Q8T0M6 FlyBase:FBgn0035980 InParanoid:Q8T0M6
OrthoDB:EOG4H9W2V ArrayExpress:Q8T0M6 Bgee:Q8T0M6
PANTHER:PTHR20982:SF4 Uniprot:Q8T0M6
Length = 254
Score = 181 (68.8 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 47/174 (27%), Positives = 91/174 (52%)
Query: 664 KMLNTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQP-- 721
+M ++ +KE+ K + + G +D +++K +L ++A I+ N TI +
Sbjct: 83 QMQKSVMQMKEDFVKHLSLPSTSGAIDTLRIKVDGQEHELQELAQISRKNPKTIIVNMIG 142
Query: 722 FEKEMSSIIKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIR 781
F + + ++K AI ++ + LNP G +++ IP +TKE RE + K K + + + +IR
Sbjct: 143 FPQTIPDVLK-AIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAKALFVKYRDAIR 201
Query: 782 KIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
++ NE D+ + AQ + + D+FI E ++LL +K+KE+L
Sbjct: 202 GVQ---NEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASKQKELL 252
>TAIR|locus:2119946 [details] [associations]
symbol:emb2726 "embryo defective 2726" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003746 "translation elongation factor activity"
evidence=IEA;ISS] [GO:0006414 "translational elongation"
evidence=IEA;ISS] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009902 "chloroplast
relocation" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0016117 "carotenoid biosynthetic
process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR003029
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00575 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 PROSITE:PS50126 GO:GO:0046686 GO:GO:0009570
EMBL:CP002687 EMBL:AL078470 EMBL:AL161574 GO:GO:0009941
GO:GO:0003746 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
SUPFAM:SSF46934 InterPro:IPR022967 SMART:SM00316 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 HSSP:P43895 EMBL:AY056792 IPI:IPI00541725
PIR:T08961 RefSeq:NP_567820.1 UniGene:At.21764
ProteinModelPortal:Q9SZD6 SMR:Q9SZD6 STRING:Q9SZD6 PRIDE:Q9SZD6
ProMEX:Q9SZD6 EnsemblPlants:AT4G29060.1 GeneID:829027
KEGG:ath:AT4G29060 TAIR:At4g29060 HOGENOM:HOG000244107
InParanoid:Q9SZD6 OMA:DDLAMQV PhylomeDB:Q9SZD6
Genevestigator:Q9SZD6 Uniprot:Q9SZD6
Length = 953
Score = 172 (65.6 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 44/122 (36%), Positives = 68/122 (55%)
Query: 193 PGNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILR 252
P +++ +++A +V A L V +LR +T A +M+CKKAL G L KA+E LR
Sbjct: 740 PKAEEAKEAVASPPTTVVSAAL----VKQLREETGAGMMDCKKALAATGGDLEKAQEFLR 795
Query: 253 IKLGKKILNISNRNAKDGVIAIYISE-KVGSLVEINCETDFVAKNNEFIKFSKKIAKLIT 311
K S+R A +G I YI + ++G L+E+NCETDFV ++ +F + +A
Sbjct: 796 KKGLSSADKKSSRLASEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELVDDLAMQAV 855
Query: 312 EN 313
N
Sbjct: 856 AN 857
Score = 158 (60.7 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 43/107 (40%), Positives = 63/107 (58%)
Query: 194 GNDDSAKSIALYTKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRI 253
GN +A+SI KGI A V +LR +T A +M+CK AL E+ G + KA+E LR
Sbjct: 508 GNTATAESI----KGISPAL-----VKQLREETGAGMMDCKNALSESEGDMVKAQEYLRK 558
Query: 254 KLGKKILNISNRNAKDGVIAIYISE-KVGSLVEINCETDFVAKNNEF 299
K ++R +G I YI + ++G L+E+NCETDFV++ + F
Sbjct: 559 KGLASADKKASRATSEGRIGAYIHDSRIGVLLEVNCETDFVSRGDIF 605
Score = 92 (37.4 bits), Expect = 7.6e-12, Sum P(2) = 7.6e-12
Identities = 27/102 (26%), Positives = 52/102 (50%)
Query: 335 EKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYN------GDNES---AV 385
EK +E + + G + ++ + + SY+HD++IGV++E N G +E V
Sbjct: 788 EKAQEFLRKKGLSSADKKSSRLASEGRIGSYIHDSRIGVLIEVNCETDFVGRSEKFKELV 847
Query: 386 KDVAMHIAAMKPIA-LSSDQIPKKIIEKEYSLAVLKAQQLGE 426
D+AM A + +S + IP++I +KE + + + L +
Sbjct: 848 DDLAMQAVANPQVQYVSIEDIPEEIKQKEKEIEMQREDLLSK 889
Score = 60 (26.2 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 333 VDEKCKELISRIGENIKIRRFKLF 356
V + K+ ++ +GENIK+RRF F
Sbjct: 924 VKDLVKQTVATLGENIKVRRFVKF 947
Score = 59 (25.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 21/83 (25%), Positives = 34/83 (40%)
Query: 333 VDEKCKELISRIGENIKIRRFKLFKTNNNLISYLHDNKIGVIVEYNGD---NESAVKDVA 389
V + K+ I+ IGENIK++RF + L D V + E + A
Sbjct: 686 VKDLVKQRIATIGENIKVKRFVRYTLGEGLEKKSQDFAAEVAAQTAAKPKAKEEPKAEEA 745
Query: 390 MHIAAMKPIALSSDQIPKKIIEK 412
A P + S + K++ E+
Sbjct: 746 KEAVASPPTTVVSAALVKQLREE 768
>SGD|S000000996 [details] [associations]
symbol:MRP4 "Mitochondrial ribosomal protein of the small
subunit" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0032543 "mitochondrial translation" evidence=IC] [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IPI] [GO:0003735
"structural constituent of ribosome" evidence=IEA;IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0000049 "tRNA binding" evidence=ISS] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 SGD:S000000996 EMBL:BK006934
GO:GO:0003735 GO:GO:0032543 GO:GO:0000049 GO:GO:0005763 EMBL:U10555
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967
GeneTree:ENSGT00390000017382 OrthoDB:EOG4J14J1 EMBL:M82841
EMBL:AY558385 PIR:A42115 RefSeq:NP_011859.1
ProteinModelPortal:P32902 SMR:P32902 DIP:DIP-5035N IntAct:P32902
MINT:MINT-482507 STRING:P32902 PaxDb:P32902 PeptideAtlas:P32902
EnsemblFungi:YHL004W GeneID:856384 KEGG:sce:YHL004W CYGD:YHL004w
HOGENOM:HOG000248605 OMA:LNPTENR NextBio:981887
Genevestigator:P32902 GermOnline:YHL004W Uniprot:P32902
Length = 394
Score = 186 (70.5 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 53/156 (33%), Positives = 81/156 (51%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
++ AGVH G T W SYI+G IHII+L +TL ++A + + + S G +L
Sbjct: 188 LMSAGVHLGQSTSLWRSSTQSYIYGEYKGIHIIDLNQTLSYLKRAAKVVEGVSESGGIIL 247
Query: 61 FVGTKR-QARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
F+GT++ Q RG + A + ++ RW+ G LTN I + I +E+D N + R
Sbjct: 248 FLGTRQGQKRG-LEEAAKKTHGYYVSTRWIPGTLTNSTEI-SGIWEKQEIDSN-DNPTER 304
Query: 120 KLSKKEALLFYRKQMK--LNRVIGGIKNMNIIPDAI 153
LS E KQ+K L V+ +N N + +AI
Sbjct: 305 ALSPNET----SKQVKPDLLVVLNPTENRNALLEAI 336
Score = 123 (48.4 bits), Expect = 0.00028, P = 0.00028
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 150 PDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSI 202
PD + +++ ++ A+ EAIK +P I ++DT+ P + Y IPGNDDS +S+
Sbjct: 317 PDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSV 369
>FB|FBgn0032646 [details] [associations]
symbol:CG6412 species:7227 "Drosophila melanogaster"
[GO:0006414 "translational elongation" evidence=ISS] [GO:0003746
"translation elongation factor activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126
PROSITE:PS01127 GO:GO:0005739 EMBL:AE014134 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 GeneTree:ENSGT00390000016293
OMA:FANCKKA EMBL:AY051938 RefSeq:NP_609847.1 UniGene:Dm.4434
HSSP:P02997 ProteinModelPortal:Q9VJC7 SMR:Q9VJC7 IntAct:Q9VJC7
MINT:MINT-318283 STRING:Q9VJC7 PaxDb:Q9VJC7 PRIDE:Q9VJC7
EnsemblMetazoa:FBtr0080994 GeneID:35060 KEGG:dme:Dmel_CG6412
UCSC:CG6412-RA FlyBase:FBgn0032646 InParanoid:Q9VJC7
OrthoDB:EOG4VT4D3 PhylomeDB:Q9VJC7 ChiTaRS:CG6412 GenomeRNAi:35060
NextBio:791621 Bgee:Q9VJC7 Uniprot:Q9VJC7
Length = 318
Score = 177 (67.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 54/171 (31%), Positives = 78/171 (45%)
Query: 214 LDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIK---LG-KKILNISNRNAKD 269
L+ + LR KT CKKAL + N + AE+ L + LG K +++R
Sbjct: 27 LEKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVADRATAH 86
Query: 270 GVIAIYISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTPXXX----------- 318
G+I + I G++VE+NCETDFVA+N+ F +F +A + + T
Sbjct: 87 GLIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVACMCLQYTDLTDFDGDLWKLGFD 146
Query: 319 XXXXXXXXXXXXXTVDEKCKELISRIGENIKIRRFKLFKTNNNL--ISYLH 367
T+ + LI IGEN IRR FK NN+L + Y H
Sbjct: 147 ADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANNDLKLVGYAH 197
>UNIPROTKB|Q4TT42 [details] [associations]
symbol:MRRFP1 "Protein MRRFP1" species:9606 "Homo sapiens"
[GO:0006412 "translation" evidence=IEA] InterPro:IPR002661
Pfam:PF01765 GO:GO:0006412 Gene3D:3.30.1360.40 InterPro:IPR024946
EMBL:Z83848 InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982
HOGENOM:HOG000007351 HOVERGEN:HBG061516 OrthoDB:EOG4QRH4V
IPI:IPI00176976 SMR:Q4TT42 STRING:Q4TT42 Ensembl:ENST00000435941
HGNC:HGNC:35238 OMA:IREHREM Uniprot:Q4TT42
Length = 262
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 57/219 (26%), Positives = 96/219 (43%)
Query: 620 LPIRVFSIIKSGALKRVIEGKNEGTLVYEIYIMIISDI--KKNTKQKMLNTIKILKENLK 677
+P+ F+ K+ A +GK + I + DI + ++M + I+ K+N
Sbjct: 50 VPVHHFATKKAKA-----KGKGKSQTRVNISAAFVEDIINLEEVNEEMKSVIEARKDNFN 104
Query: 678 KVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KEMSSIIKKAINE 736
K + G LD I V + L +I I++ I + E + KAI E
Sbjct: 105 KTLNIGTSPGSLDKIAVVTADGKLALNQIRQISVKLPQLILVNMASFPEFTVAAIKAIRE 164
Query: 737 ANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXX 796
+ + LNP ++G +I V IP + +E RE +VKL K T + S+RK+ +N
Sbjct: 165 SGMNLNPEVEGTLIRVPIPQVIREHREMLVKLAKQNTNKATYSLRKVC--TNAMNKLKKS 222
Query: 797 XXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
S + I ++ D + E+ + L K KE+L
Sbjct: 223 KDTVSEGTIRLTEKQISQMADDTVAELYRHLAVKTKELL 261
>DICTYBASE|DDB_G0286399 [details] [associations]
symbol:tsfm "elongation factor Ts" species:44689
"Dictyostelium discoideum" [GO:0006414 "translational elongation"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
dictyBase:DDB_G0286399 GO:GO:0005739 GenomeReviews:CM000153_GR
GO:GO:0003746 EMBL:AAFI02000085 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
TIGRFAMs:TIGR00116 RefSeq:XP_637727.1 ProteinModelPortal:Q54LV3
STRING:Q54LV3 EnsemblProtists:DDB0266366 GeneID:8625592
KEGG:ddi:DDB_G0286399 OMA:ILEMNSE ProtClustDB:CLSZ2846693
Uniprot:Q54LV3
Length = 355
Score = 137 (53.3 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 34/111 (30%), Positives = 61/111 (54%)
Query: 206 TKGIVDAFLDAKTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILN-ISN 264
T+ + + + V +LR KT +P+ ECKKAL +N + A + L ++ GK + +
Sbjct: 38 TQSTSEVKVPTELVVQLRKKTQSPVQECKKALQASNNDMDGAIKWL-LEKGKATAEKLKS 96
Query: 265 RNAKDGVIAIYISEKVGSLV--EINCETDFVAKNNEFIKFSKKIAKLITEN 313
R + +G+I++ + G V E+N ETDFV++ + F ++ I+K N
Sbjct: 97 RVSAEGIISVLVDSGSGKAVILEMNSETDFVSRGDIFRNLARDISKATLSN 147
Score = 65 (27.9 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 332 TVDEKCKELISRIGENIKIRRFKLFKT-NNNLISYLHDNKIGVIVEYNGDNESAVKDV 388
T+ + ++S++ ENI IRR + NNN ++N I Y D+ S KDV
Sbjct: 188 TIKDSIVRIVSKLRENIVIRRASFIQPLNNN-----NNNSKSYISSYAHDSTSEKKDV 240
Score = 64 (27.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 20/65 (30%), Positives = 36/65 (55%)
Query: 364 SYLHDN--------KIGVIV--EYNGD--NESAVKD----VAMHIAAMKPIALSSDQIPK 407
SY HD+ ++G IV EY GD N +++K+ +A+HI + P ++ + IP
Sbjct: 228 SYAHDSTSEKKDVGRLGSIVQFEYQGDCNNMNSLKEFANQLAIHIVSNSPSVVTVNDIPS 287
Query: 408 KIIEK 412
++E+
Sbjct: 288 SVLEE 292
Score = 43 (20.2 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 730 IKKAINEANLGLNPTIQGNIIYVSIPPLTKERREEIVKLIKNITEETKISIRKIRRDS 787
+ + I++A L NP G + I L + E I + NIT E ++ +DS
Sbjct: 136 LARDISKATLS-NPISGGKLAENGILELDPTQVENIYPIKINITNEDGVAEEMTIKDS 192
>CGD|CAL0001448 [details] [associations]
symbol:orf19.5747 species:5476 "Candida albicans" [GO:0005763
"mitochondrial small ribosomal subunit" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00963 CGD:CAL0001448
GO:GO:0006412 GO:GO:0003735 EMBL:AACQ01000046 EMBL:AACQ01000047
GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 eggNOG:COG0052 KO:K02967 RefSeq:XP_718017.1
RefSeq:XP_718083.1 ProteinModelPortal:Q5A8K1 STRING:Q5A8K1
GeneID:3640303 GeneID:3640369 KEGG:cal:CaO19.13170
KEGG:cal:CaO19.5747 Uniprot:Q5A8K1
Length = 460
Score = 165 (63.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 39/157 (24%), Positives = 83/157 (52%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
++ AG H GH T + P M +I+G +K+HII+L KTL A + I + G +L
Sbjct: 241 LMAAGCHLGHSTSSFRPSMQPFIYGIYDKVHIIDLNKTLEKLTLACKVIEGVVEKGGVVL 300
Query: 61 FVGTKRQARGV---IANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLK-EMDLFITNG 116
+VGT + + + + R+ ++++RW+ G +TN+ + ++K +M++ + +
Sbjct: 301 YVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVDMKD- 359
Query: 117 SIRKLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAI 153
+K++ K + + + + ++ ++N N I + I
Sbjct: 360 --QKITTKNSNKIIKPDLVV--LLNPVENRNCIKECI 392
Score = 39 (18.8 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 653 IISDIKKNTKQKMLNTIKILKENLKKV 679
I+S ++ QK ++ +K L+EN KV
Sbjct: 431 IMSKSAESGLQKRISAVKKLEENDGKV 457
>ZFIN|ZDB-GENE-061215-17 [details] [associations]
symbol:tsfm "Ts translation elongation factor,
mitochondrial" species:7955 "Danio rerio" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006414 "translational
elongation" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01127 ZFIN:ZDB-GENE-061215-17 GO:GO:0005622 GO:GO:0003746
SUPFAM:SSF46934 Gene3D:3.30.479.20 PANTHER:PTHR11741
SUPFAM:SSF54713 TIGRFAMs:TIGR00116 HOGENOM:HOG000220988
HOVERGEN:HBG005571 EMBL:BC152076 IPI:IPI00829007 UniGene:Dr.84965
STRING:A7MC80 ArrayExpress:A7MC80 Uniprot:A7MC80
Length = 311
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 45/168 (26%), Positives = 77/168 (45%)
Query: 223 RSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYISE 278
R T + CKKAL + N +++AE L + K K + R AK+G+I + + +
Sbjct: 50 RKSTGYTFVNCKKALEKCNNDITQAESWLHEQAKKEGWSKATKLEGRKAKEGLIGLMMHD 109
Query: 279 KVGSLVEINCETDFVAKNNEFIKFSKKIAKLIT--ENTPXXXXXXXXXXXXXXXXTVD-- 334
+VE+NCETDFVA+N +F + K +A + ++T ++
Sbjct: 110 NAAVMVEVNCETDFVARNEKFQQLVKDVALSVMAHQSTSKKTGFIKSVLSSEDMSKLNAP 169
Query: 335 ------EKCKELISRIGENIKIRRFKLFKTNNN--LISYLHDNKIGVI 374
++ I R+GENI +RR ++ + SY+H G +
Sbjct: 170 DGPSLADQLALTIGRLGENIAMRRAVSLSVPSDWHIGSYIHGTVAGQV 217
>ZFIN|ZDB-GENE-070112-992 [details] [associations]
symbol:mrps2 "mitochondrial ribosomal protein S2"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
ZFIN:ZDB-GENE-070112-992 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
TIGRFAMs:TIGR01011 GeneTree:ENSGT00390000017382 EMBL:CU655836
IPI:IPI00972285 Ensembl:ENSDART00000114670 ArrayExpress:F1RDB9
Bgee:F1RDB9 Uniprot:F1RDB9
Length = 285
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 43/153 (28%), Positives = 75/153 (49%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ +A VH GH+ + M Y+FG R + II+LE+T+ ++A+ + + F G +L
Sbjct: 96 LFDARVHLGHKKGCRHALMEPYLFGCRLDMDIIDLEQTVDHLQRALNFTAHVAFRGGVVL 155
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLTNFKTIKTSIQRLKEMDLFITNGSIRK 120
FV +RQ ++ A G + W GGLLTN RL ++ +F++ ++
Sbjct: 156 FVSRRRQFAHLVETTARDCGEYAHTRYWKGGLLTNAPIQYNPGVRLPDLIVFLS--TLNN 213
Query: 121 LSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAI 153
+ ++ + R K+N GI + N P I
Sbjct: 214 VFQEHVGI--RDAAKMNIPTVGIVDSNCNPSLI 244
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 161 HKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
H G + +A K+NIP +G+VD+N +P I+Y +PGNDD+ ++ LY +
Sbjct: 218 HVG-IRDAAKMNIPTVGIVDSNCNPSLISYPVPGNDDTPAAMELYCR 263
>UNIPROTKB|C9JG32 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:C9JG32
SMR:C9JG32 STRING:C9JG32 PRIDE:C9JG32 Ensembl:ENST00000434359
HOGENOM:HOG000152327 ArrayExpress:C9JG32 Bgee:C9JG32 Uniprot:C9JG32
Length = 140
Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F +++A
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVA 92
>UNIPROTKB|C9JT21 [details] [associations]
symbol:TSFM "Elongation factor Ts" species:9606 "Homo
sapiens" [GO:0005622 "intracellular" evidence=IEA] [GO:0003746
"translation elongation factor activity" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOGENOM:HOG000220988 HGNC:HGNC:12367 IPI:IPI00916739
ProteinModelPortal:C9JT21 SMR:C9JT21 STRING:C9JT21 PRIDE:C9JT21
Ensembl:ENST00000457189 ArrayExpress:C9JT21 Bgee:C9JT21
Uniprot:C9JT21
Length = 169
Score = 130 (50.8 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 2 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 61
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F +++A
Sbjct: 62 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVA 92
>UNIPROTKB|I3LF68 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9823 "Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
InterPro:IPR018101 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
GeneTree:ENSGT00390000016293 Ensembl:ENSSSCT00000024924 OMA:AGPEHEG
Uniprot:I3LF68
Length = 162
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 221 ELRSKTLAPIMECKKAL-IEAN-GKLSKAEEILRIKLGK----KILNISNRNAKDGVIAI 274
+LR KT + CKKAL +E G L +AE L + K K + R K+G+I +
Sbjct: 51 KLRRKTGYSFVNCKKALXLETCCGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGL 110
Query: 275 YISEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F + +++A
Sbjct: 111 LQEGNTSVLVEVNCETDFVSRNLKFQQLVQQVA 143
>UNIPROTKB|Q5T8A0 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 GO:GO:0006412
GO:GO:0003735 GO:GO:0015935 EMBL:AL161452 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 HOGENOM:HOG000071892
HOVERGEN:HBG028633 OMA:YAHTRYW UniGene:Hs.382044 HGNC:HGNC:14495
SMR:Q5T8A0 Ensembl:ENST00000453385 Uniprot:Q5T8A0
Length = 270
Score = 144 (55.7 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ +A VH GH+ + M YIFG R II+LE+T + A+ + + + KG +L
Sbjct: 98 LFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIIL 157
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
F+ RQ +I N A G + R+ GG+LTN + + RL ++ +F+ ++
Sbjct: 158 FISRNRQFSYLIENMARDCG-EYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLH--TLN 214
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIP 150
+ + + R K+N GI + N P
Sbjct: 215 NIFEPHVAV--RDAAKMNIPTVGIVDTNCNP 243
Score = 125 (49.1 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 97 KTIKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLN-RVIGGIKNMNIIPDAIFI 155
K I I R ++ I N + R + ++R M N R++ G + + PD I
Sbjct: 153 KGIILFISRNRQFSYLIENMA-RDCGEYAHTRYFRGGMLTNARLLFG-PTVRL-PDLIIF 209
Query: 156 I----DVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
+ ++ AV +A K+NIP +G+VDTN +P I Y +PGNDDS ++ LY +
Sbjct: 210 LHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHLYCR 265
>RGD|1309116 [details] [associations]
symbol:Mrps2 "mitochondrial ribosomal protein S2" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 RGD:1309116
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
GeneTree:ENSGT00390000017382 OMA:YAHTRYW OrthoDB:EOG4XWFZM
IPI:IPI00207595 Ensembl:ENSRNOT00000013548 UCSC:RGD:1309116
Uniprot:D3ZY44
Length = 291
Score = 144 (55.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ EA VH GH+ + M YIFG+R II+L++T + A+ + + + KG +L
Sbjct: 81 LFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIIL 140
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
FV RQ +I A G + R+ GGLLTN + + RL ++ +F+ ++
Sbjct: 141 FVSRNRQFSHLIETTAQACG-EYAHTRYFKGGLLTNAQLLFGPTVRLPDLIVFLH--TLN 197
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIP 150
+ + + R K+N GI + N P
Sbjct: 198 NVFESHVAV--RDAAKMNIPTVGIVDTNCNP 226
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
AV +A K+NIP +G+VDTN +P I Y IPGNDDS ++I L+ K
Sbjct: 205 AVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPQAIQLFCK 248
>UNIPROTKB|Q9Y399 [details] [associations]
symbol:MRPS2 "28S ribosomal protein S2, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
PROSITE:PS00963 GO:GO:0005739 GO:GO:0006412 GO:GO:0003735
GO:GO:0015935 EMBL:AL161452 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 HOGENOM:HOG000071892 eggNOG:COG0052 CTD:51116
HOVERGEN:HBG028633 OrthoDB:EOG4XWFZM EMBL:AB055388 EMBL:AF151849
EMBL:BC004905 EMBL:BC008017 EMBL:BC013108 IPI:IPI00006970
RefSeq:NP_057118.1 UniGene:Hs.382044 ProteinModelPortal:Q9Y399
SMR:Q9Y399 IntAct:Q9Y399 STRING:Q9Y399 PhosphoSite:Q9Y399
DMDM:24212389 PaxDb:Q9Y399 PRIDE:Q9Y399 Ensembl:ENST00000241600
Ensembl:ENST00000371785 GeneID:51116 KEGG:hsa:51116 UCSC:uc004cfv.4
GeneCards:GC09P138391 H-InvDB:HIX0035038 HGNC:HGNC:14495 MIM:611971
neXtProt:NX_Q9Y399 PharmGKB:PA31007 InParanoid:Q9Y399
PhylomeDB:Q9Y399 GenomeRNAi:51116 NextBio:53885 ArrayExpress:Q9Y399
Bgee:Q9Y399 CleanEx:HS_MRPS2 Genevestigator:Q9Y399
GermOnline:ENSG00000122140 Uniprot:Q9Y399
Length = 296
Score = 144 (55.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ +A VH GH+ + M YIFG R II+LE+T + A+ + + + KG +L
Sbjct: 84 LFDARVHLGHKAGCRHRFMEPYIFGSRLDHDIIDLEQTATHLQLALNFTAHMAYRKGIIL 143
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
F+ RQ +I N A G + R+ GG+LTN + + RL ++ +F+ ++
Sbjct: 144 FISRNRQFSYLIENMARDCG-EYAHTRYFRGGMLTNARLLFGPTVRLPDLIIFLH--TLN 200
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIP 150
+ + + R K+N GI + N P
Sbjct: 201 NIFEPHVAV--RDAAKMNIPTVGIVDTNCNP 229
Score = 128 (50.1 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 97 KTIKTSIQRLKEMDLFITNGSIRKLSKKEALLFYRKQMKLN-RVIGGIKNMNIIPDAIFI 155
K I I R ++ I N + R + ++R M N R++ G + + PD I
Sbjct: 139 KGIILFISRNRQFSYLIENMA-RDCGEYAHTRYFRGGMLTNARLLFG-PTVRL-PDLIIF 195
Query: 156 I----DVGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVD 211
+ ++ AV +A K+NIP +G+VDTN +P I Y +PGNDDS ++ LY +
Sbjct: 196 LHTLNNIFEPHVAVRDAAKMNIPTVGIVDTNCNPCLITYPVPGNDDSPLAVHLYCRLFQT 255
Query: 212 AFLDAK 217
A AK
Sbjct: 256 AITRAK 261
>SGD|S000001080 [details] [associations]
symbol:RRF1 "Mitochondrial ribosome recycling factor"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0032543 "mitochondrial translation" evidence=IMP] [GO:0003747
"translation release factor activity" evidence=ISO]
InterPro:IPR002661 InterPro:IPR015999 SGD:S000001080 Pfam:PF01765
GO:GO:0005739 EMBL:BK006934 EMBL:U00062 GO:GO:0032543 GO:GO:0003747
eggNOG:COG0233 KO:K02838 OrthoDB:EOG418FZ7 InterPro:IPR023584
SUPFAM:SSF55194 EMBL:AB016033 PIR:S46737 RefSeq:NP_011903.1
ProteinModelPortal:P38771 SMR:P38771 DIP:DIP-1693N IntAct:P38771
MINT:MINT-407253 STRING:P38771 PaxDb:P38771 EnsemblFungi:YHR038W
GeneID:856433 KEGG:sce:YHR038W CYGD:YHR038w HOGENOM:HOG000094410
OMA:PNNDGEV NextBio:982027 Genevestigator:P38771 GermOnline:YHR038W
PANTHER:PTHR20982 PANTHER:PTHR20982:SF1 Uniprot:P38771
Length = 230
Score = 140 (54.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 54/233 (23%), Positives = 109/233 (46%)
Query: 609 STAFSFCRDQKLPIRVFSIIKSGALKRVIEGKNEGTLVYEIYI--MIISDIKKNTKQKML 666
+TA CR +P R+F+ +S + +I K T ++ + ++++ K + +
Sbjct: 4 TTARLNCRPVTVP-RLFN--RSFSQSFIILKKKSSTPTEKVEEDEIDVNELLKKAETQFK 60
Query: 667 NTIKILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLKIANITLFNSHTISIQPFE-KE 725
T++I K+ + +++ G N + +++ K + T IA +L + + I F+ K+
Sbjct: 61 KTLEIQKQKMNEIKQGNFNPKVFNSLVFKNNRKFTD---IATTSLKGKNALLITVFDPKD 117
Query: 726 MSSIIKKAINEANLGLNPT-IQGNIIY--VSIPPLTKERREEIVKLIKNITEETKISIRK 782
+ ++I + ANL L P + N + VS+PP T E R ++ K +K + EE K S K
Sbjct: 118 VKTVISGVL-AANLNLTPERVPNNDLQLKVSLPPPTTESRLKVAKDLKRVFEEYKQSSLK 176
Query: 783 IRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILEINQLLINKEKEIL 835
+ D +A+ D++KL ++ +++ EK I+
Sbjct: 177 DSLGTIRGSILKEFKSFKKDDAVRKAERDLEKLHKDYVNKLHDQFQKVEKSIV 229
>TAIR|locus:2096394 [details] [associations]
symbol:RPS2 "ribosomal protein S2" species:3702
"Arabidopsis thaliana" [GO:0003735 "structural constituent of
ribosome" evidence=IEA;ISS;TAS] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS;TAS]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0019408 "dolichol biosynthetic process" evidence=RCA]
InterPro:IPR001865 InterPro:IPR005706 InterPro:IPR018130
Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962 PROSITE:PS00963
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
EMBL:AC009327 GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 eggNOG:COG0052 EMBL:AF273102 EMBL:BT003049
EMBL:AY084362 IPI:IPI00517280 RefSeq:NP_187010.1 UniGene:At.18448
ProteinModelPortal:Q9GCB9 SMR:Q9GCB9 STRING:Q9GCB9 PaxDb:Q9GCB9
PRIDE:Q9GCB9 EnsemblPlants:AT3G03600.1 GeneID:821211
KEGG:ath:AT3G03600 TAIR:At3g03600 HOGENOM:HOG000120703
InParanoid:Q9GCB9 OMA:VANLAHM ProtClustDB:CLSN2684095
Genevestigator:Q9GCB9 GermOnline:AT3G03600 Uniprot:Q9GCB9
Length = 219
Score = 97 (39.2 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 33/115 (28%), Positives = 51/115 (44%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+L G H G + + K Y +G RN + II+ +KTL A ++ L +G +
Sbjct: 11 LLNTGAHLGRRAAEHHFKQ--YAYGTRNGMTIIDSDKTLICLRSAAHFVANLAHMRGNIF 68
Query: 61 FVGTKRQARGVIANEAVRA-GMPFIDQR----W-LGGLLTNFKTIKTSIQRLKEM 109
FV T +I + R G + R W +GG LTN + K R K++
Sbjct: 69 FVNTNPLFDEIIELTSRRIQGDSYNHNRAMNLWKMGGFLTNSYSPKKFRSRHKKL 123
Score = 88 (36.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 149 IPDAIFIIDVGYHKGAVSEAIKLNIPIIGVVDTNHSP----DGINYVIPGNDDSAKSIAL 204
+PD + + D + EA KL IP++ +VD N P + I Y +P D S K + L
Sbjct: 130 MPDCVVVFDSERKSSVILEASKLQIPVVAIVDPN-VPLEFFEKITYPVPARD-SVKFVYL 187
Query: 205 YTKGIVDAFL 214
+ I F+
Sbjct: 188 FCNVITKCFV 197
>MGI|MGI:2153089 [details] [associations]
symbol:Mrps2 "mitochondrial ribosomal protein S2"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001865
InterPro:IPR005706 InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395
PROSITE:PS00962 PROSITE:PS00963 MGI:MGI:2153089 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 EMBL:AL772249 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
HOGENOM:HOG000071892 eggNOG:COG0052 CTD:51116
GeneTree:ENSGT00390000017382 HOVERGEN:HBG028633 OMA:YAHTRYW
OrthoDB:EOG4XWFZM EMBL:AB055389 EMBL:AK077219 EMBL:AK154131
EMBL:AK165956 EMBL:BC060503 IPI:IPI00126011 RefSeq:NP_001159503.2
RefSeq:NP_536700.3 UniGene:Mm.294951 ProteinModelPortal:Q924T2
SMR:Q924T2 STRING:Q924T2 PhosphoSite:Q924T2 PaxDb:Q924T2
PRIDE:Q924T2 Ensembl:ENSMUST00000038600 GeneID:118451
KEGG:mmu:118451 UCSC:uc008iyi.1 InParanoid:A2AK29 NextBio:369732
Bgee:Q924T2 CleanEx:MM_MRPS2 Genevestigator:Q924T2
GermOnline:ENSMUSG00000035772 Uniprot:Q924T2
Length = 291
Score = 143 (55.4 bits), Expect = 8.6e-07, P = 8.6e-07
Identities = 44/151 (29%), Positives = 73/151 (48%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ EA VH GH+ + M YIFG+R II+L++T + A+ + + + KG +L
Sbjct: 81 LFEARVHLGHKAGCRHRFMEPYIFGNRLGQDIIDLDQTALNLQLALNFTAHVAYRKGIIL 140
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
FV RQ +I A G + R+ GGLLTN + + RL ++ +F+ ++
Sbjct: 141 FVSRNRQFSHLIETTAQACG-EYAHTRYFKGGLLTNAQLLFGPSVRLPDLIIFLH--TLN 197
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIP 150
+ + + R K+N GI + N P
Sbjct: 198 NVFEPHVAV--RDAAKMNIPTVGIVDTNCNP 226
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
AV +A K+NIP +G+VDTN +P I Y IPGNDDS ++I L+ K
Sbjct: 205 AVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSPQAIQLFCK 248
>MGI|MGI:1913649 [details] [associations]
symbol:Tsfm "Ts translation elongation factor,
mitochondrial" species:10090 "Mus musculus" [GO:0003746
"translation elongation factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006412 "translation" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 MGI:MGI:1913649 GO:GO:0005739
GO:GO:0005634 GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 OMA:FANCKKA EMBL:AK012240 EMBL:AK169164
EMBL:BC057904 IPI:IPI00113052 RefSeq:NP_079813.1 UniGene:Mm.29900
ProteinModelPortal:Q9CZR8 SMR:Q9CZR8 STRING:Q9CZR8
PhosphoSite:Q9CZR8 PaxDb:Q9CZR8 PRIDE:Q9CZR8
Ensembl:ENSMUST00000040560 GeneID:66399 KEGG:mmu:66399
UCSC:uc007hhm.1 InParanoid:Q9CZR8 ChiTaRS:TSFM NextBio:321563
Bgee:Q9CZR8 CleanEx:MM_TSFM Genevestigator:Q9CZR8
GermOnline:ENSMUSG00000040521 Uniprot:Q9CZR8
Length = 324
Score = 139 (54.0 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE+ L + K K + R K+G+I +
Sbjct: 51 KLRRKTGYSFVNCKKALETCGGDLKQAEDWLHKQAQKEGWSKAAKLHGRKTKEGLIGLLQ 110
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F + +++A
Sbjct: 111 EGNTAVLVEVNCETDFVSRNLKFQQLVQQVA 141
>UNIPROTKB|F8VPA7 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01022674 ProteinModelPortal:F8VPA7
SMR:F8VPA7 Ensembl:ENST00000548851 ArrayExpress:F8VPA7 Bgee:F8VPA7
Uniprot:F8VPA7
Length = 200
Score = 130 (50.8 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 52 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 111
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F +++A
Sbjct: 112 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVA 142
>RGD|1593058 [details] [associations]
symbol:Tsfm "Ts translation elongation factor, mitochondrial"
species:10116 "Rattus norvegicus" [GO:0003746 "translation
elongation factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
RGD:1593058 GO:GO:0005739 GO:GO:0003746 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HOVERGEN:HBG005571 EMBL:AJ005161 IPI:IPI00555157
ProteinModelPortal:Q9QYU2 SMR:Q9QYU2 PRIDE:Q9QYU2
Genevestigator:Q9QYU2 Uniprot:Q9QYU2
Length = 324
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR T + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 51 KLRRTTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKAAKLHGRKTKEGLIGLLQ 110
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
E LVE+NCETDFV++N +F + +++A
Sbjct: 111 EENTAVLVEVNCETDFVSRNVKFQQLVQQVA 141
>WB|WBGene00020625 [details] [associations]
symbol:mrrf-1 species:6239 "Caenorhabditis elegans"
[GO:0006412 "translation" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR002661
Pfam:PF01765 GO:GO:0005739 GO:GO:0040010 GO:GO:0006412
Gene3D:3.30.1360.40 InterPro:IPR024946 EMBL:FO080916 KO:K02838
InterPro:IPR023584 SUPFAM:SSF55194 PANTHER:PTHR20982 PIR:T29207
RefSeq:NP_491262.2 ProteinModelPortal:P91478 SMR:P91478
STRING:P91478 PaxDb:P91478 EnsemblMetazoa:T20F5.3.1
EnsemblMetazoa:T20F5.3.2 GeneID:171976 KEGG:cel:CELE_T20F5.3
UCSC:T20F5.3 CTD:171976 WormBase:T20F5.3 eggNOG:NOG287229
GeneTree:ENSGT00390000005084 InParanoid:P91478 OMA:HAAEQRG
NextBio:873493 InterPro:IPR016001 PANTHER:PTHR20982:SF2
Uniprot:P91478
Length = 238
Score = 133 (51.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 43/146 (29%), Positives = 79/146 (54%)
Query: 653 IISDIKKNTK-QKMLNTIK----ILKENLKKVRTGRANIGMLDNIQVKYHEHLTKLLK-I 706
+ S++++N Q+ + I+ +L E L + + + +I +++ VK K L I
Sbjct: 47 VFSNLEENAVVQETIKEIQRVEGLLVEELTRHFSLKVDIRQYEDVMVKLENGKDKPLSMI 106
Query: 707 ANITLFNSHTISIQPFEKEMSSI--IKKAINEANLGLNPTIQGNIIYVSIPPLTKERREE 764
A +TL + I I F+ S+I K AI ++ L + P +G ++YV++PP++KERRE+
Sbjct: 107 ARVTLKSPLMIMIN-FQDNPSAIKAAKLAIQKSTLNVTPQQEGAVLYVNVPPMSKERREK 165
Query: 765 IVKLIKN-ITEETKISIRKIRRDSNE 789
+ K I E K +I +I S++
Sbjct: 166 MASDAKGRILNEYKKAINEIYSKSDK 191
>FB|FBgn0031639 [details] [associations]
symbol:mRpS2 "mitochondrial ribosomal protein S2"
species:7227 "Drosophila melanogaster" [GO:0006412 "translation"
evidence=ISS] [GO:0005763 "mitochondrial small ribosomal subunit"
evidence=ISS] [GO:0003735 "structural constituent of ribosome"
evidence=ISS] InterPro:IPR001865 InterPro:IPR005706 Pfam:PF00318
PRINTS:PR00395 EMBL:AE014134 GO:GO:0006412 GO:GO:0003735
GO:GO:0005763 InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
eggNOG:COG0052 CTD:51116 GeneTree:ENSGT00390000017382 OMA:YAHTRYW
EMBL:AY118630 RefSeq:NP_523473.2 UniGene:Dm.2745 SMR:Q8MSS7
STRING:Q8MSS7 EnsemblMetazoa:FBtr0077408 GeneID:33688
KEGG:dme:Dmel_CG2937 UCSC:CG2937-RA FlyBase:FBgn0031639
HOGENOM:HOG000236681 InParanoid:Q8MSS7 OrthoDB:EOG4WM39F
GenomeRNAi:33688 NextBio:784797 Uniprot:Q8MSS7
Length = 264
Score = 134 (52.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/154 (26%), Positives = 70/154 (45%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ A VH+GH+ + +M Y+FG R I +L+KT A+ + + F G +L
Sbjct: 63 LFNARVHYGHKEGSLDDRMRPYLFGSRLGHLIFDLDKTASHLRDALNFAAHIAFRDGIIL 122
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQR-WLGGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
F ++ +A AG F R W GG+ TN ++ RL ++ +F+ N
Sbjct: 123 FFNRNAMNSHLVERKAQEAG-EFSHTRFWRGGIFTNANVQFDAVTRLPDLCIFL-NTQNN 180
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAI 153
+++ A+ R K+ GI + N P+ I
Sbjct: 181 VMAQHTAV---RDAAKMAIPTIGIVDSNCNPNLI 211
Score = 124 (48.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTKGIVDAFLDAK 217
AV +A K+ IP IG+VD+N +P+ I Y +PGNDDS ++ LY +A L K
Sbjct: 187 AVRDAAKMAIPTIGIVDSNCNPNLITYPVPGNDDSPAAVELYCNLFKEAILRGK 240
>UNIPROTKB|F1NVE1 [details] [associations]
symbol:Gga.22522 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PROSITE:PS00962 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591
PANTHER:PTHR12534 SUPFAM:SSF52313 GeneTree:ENSGT00390000017382
EMBL:AADN02026425 IPI:IPI00588562 Ensembl:ENSGALT00000034825
Uniprot:F1NVE1
Length = 122
Score = 116 (45.9 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 31/94 (32%), Positives = 47/94 (50%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ +A VH GH+ + M YIFG R II+L++T+ + A + + + KG +L
Sbjct: 30 LFDARVHLGHKKGCRHQFMKPYIFGCRLDQDIIDLDQTMQHLQLADNFTAHVAYRKGIIL 89
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWLGGLLT 94
FV RQ + + A G + W GGLLT
Sbjct: 90 FVSRNRQFCLRVESTARECGET-TRRYWQGGLLT 122
>GENEDB_PFALCIPARUM|PFC0225c [details] [associations]
symbol:PFC0225c "elongation factor (EF-TS),
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449
InterPro:IPR001816 InterPro:IPR009060 InterPro:IPR014039
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 SUPFAM:SSF46934 EMBL:AL844502
GO:GO:0020011 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 OMA:ILEMNSE RefSeq:XP_001351126.1
ProteinModelPortal:O97235 EnsemblProtists:PFC0225c:mRNA
GeneID:814368 KEGG:pfa:PFC0225c EuPathDB:PlasmoDB:PF3D7_0305000
HOGENOM:HOG000284141 ProtClustDB:CLSZ2432189 Uniprot:O97235
Length = 390
Score = 111 (44.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 217 KTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISN-RNAKDGVIAIY 275
K + +R T A I C KAL E N + KA E +R +N + K+G++A
Sbjct: 58 KLLKYVREVTNASIQLCNKALKECNNDVDKAIEHVRKNTKSSTFVSTNIKVKKEGLVASQ 117
Query: 276 ISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITEN 313
I + L+E+ ++DFVA+N F++F + + +N
Sbjct: 118 IKDDKIVLLELLTDSDFVARNKMFVQFVYSLLNVTLDN 155
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 360 NNLISYLHDNKIGVIVEYNGDN-ESAVKDVAMHIAAMKPIALSSDQIPKKIIEKEYSL 416
+ ++ LH N + I++ ++ + D++MHI + KP ++S D + KI +KE +
Sbjct: 254 SGVLLVLHINNLDEILKTKKEDIVNFANDLSMHIISAKPASVSIDTLNPKITKKEMDI 311
>UNIPROTKB|O97235 [details] [associations]
symbol:PFC0225c "Elongation factor Ts, mitochondrial"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005739 GO:GO:0003746
SUPFAM:SSF46934 EMBL:AL844502 GO:GO:0020011 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
OMA:ILEMNSE RefSeq:XP_001351126.1 ProteinModelPortal:O97235
EnsemblProtists:PFC0225c:mRNA GeneID:814368 KEGG:pfa:PFC0225c
EuPathDB:PlasmoDB:PF3D7_0305000 HOGENOM:HOG000284141
ProtClustDB:CLSZ2432189 Uniprot:O97235
Length = 390
Score = 111 (44.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 217 KTVGELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGKKILNISN-RNAKDGVIAIY 275
K + +R T A I C KAL E N + KA E +R +N + K+G++A
Sbjct: 58 KLLKYVREVTNASIQLCNKALKECNNDVDKAIEHVRKNTKSSTFVSTNIKVKKEGLVASQ 117
Query: 276 ISEKVGSLVEINCETDFVAKNNEFIKFSKKIAKLITEN 313
I + L+E+ ++DFVA+N F++F + + +N
Sbjct: 118 IKDDKIVLLELLTDSDFVARNKMFVQFVYSLLNVTLDN 155
Score = 71 (30.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 360 NNLISYLHDNKIGVIVEYNGDN-ESAVKDVAMHIAAMKPIALSSDQIPKKIIEKEYSL 416
+ ++ LH N + I++ ++ + D++MHI + KP ++S D + KI +KE +
Sbjct: 254 SGVLLVLHINNLDEILKTKKEDIVNFANDLSMHIISAKPASVSIDTLNPKITKKEMDI 311
>UNIPROTKB|F8VS27 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0003746 EMBL:AC025165 SUPFAM:SSF46934
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
HGNC:HGNC:12367 IPI:IPI01021816 ProteinModelPortal:F8VS27
SMR:F8VS27 Ensembl:ENST00000550559 ArrayExpress:F8VS27 Bgee:F8VS27
Uniprot:F8VS27
Length = 230
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 52 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 111
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F +++A
Sbjct: 112 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVA 142
>UNIPROTKB|P43896 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003746 "translation
elongation factor activity" evidence=IEA] HAMAP:MF_00050
InterPro:IPR000449 InterPro:IPR001816 InterPro:IPR009060
InterPro:IPR014039 InterPro:IPR018101 Pfam:PF00627 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 GO:GO:0005739 GO:GO:0005634
GO:GO:0003746 SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713 EMBL:L37935
EMBL:BC149988 IPI:IPI00697490 PIR:I45941 RefSeq:NP_776629.1
UniGene:Bt.103027 PDB:1XB2 PDBsum:1XB2 ProteinModelPortal:P43896
SMR:P43896 IntAct:P43896 STRING:P43896 PRIDE:P43896
Ensembl:ENSBTAT00000022496 GeneID:281551 KEGG:bta:281551 CTD:10102
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988
HOVERGEN:HBG005571 InParanoid:P43896 OMA:FANCKKA OrthoDB:EOG48PMKQ
EvolutionaryTrace:P43896 NextBio:20805502 Uniprot:P43896
Length = 338
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 65 KLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAARLHGRKTKEGLIGLLQ 124
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F + +++A
Sbjct: 125 EGDTTVLVEVNCETDFVSRNLKFQQLVQQVA 155
>POMBASE|SPBC800.07c [details] [associations]
symbol:tsf1 "mitochondrial translation elongation factor
EF-Ts Tsf1" species:4896 "Schizosaccharomyces pombe" [GO:0003746
"translation elongation factor activity" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005759 "mitochondrial
matrix" evidence=IGI] [GO:0006414 "translational elongation"
evidence=IGI] [GO:0032543 "mitochondrial translation" evidence=NAS]
HAMAP:MF_00050 InterPro:IPR001816 InterPro:IPR014039 Pfam:PF00889
PROSITE:PS01126 PROSITE:PS01127 PomBase:SPBC800.07c GO:GO:0005525
GO:GO:0005759 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003746
GO:GO:0005085 GO:GO:0032543 eggNOG:COG0264 KO:K02357
Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
RefSeq:NP_595108.1 HSSP:P43895 ProteinModelPortal:Q9HGL5
STRING:Q9HGL5 EnsemblFungi:SPBC800.07c.1 GeneID:2540692
KEGG:spo:SPBC800.07c OrthoDB:EOG49W5R5 NextBio:20801816
Uniprot:Q9HGL5
Length = 299
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 40/104 (38%), Positives = 58/104 (55%)
Query: 219 VGELRSKTLAPIMECKKALIEAN-GKLSKAEEILRIKL---GKKILNIS-NRNAKDGVIA 273
+ +LRS+T A + K+++ EA G L A EIL+ K+ G K+ S NR AK+G I
Sbjct: 37 IKKLRSETNASMDLVKQSVEEAGVGNLELAREILKKKIVQRGGKLAEKSKNRTAKEGWII 96
Query: 274 IYISE--KVGSLVEINCETDFVAKNNEFIKFSKKIAKLITENTP 315
ISE + + EINCE+DFVA+ F +++IA P
Sbjct: 97 QCISEDGRKAVMAEINCESDFVAQTTPFQDLARRIASTFLHYLP 140
>UNIPROTKB|F1S001 [details] [associations]
symbol:MRPS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001865 InterPro:IPR005706
InterPro:IPR018130 Pfam:PF00318 PRINTS:PR00395 PROSITE:PS00962
GO:GO:0005739 GO:GO:0006412 GO:GO:0003735 GO:GO:0015935
InterPro:IPR023591 PANTHER:PTHR12534 SUPFAM:SSF52313
GeneTree:ENSGT00390000017382 OMA:YAHTRYW EMBL:FP102268
RefSeq:XP_003122327.1 UniGene:Ssc.1787 Ensembl:ENSSSCT00000006335
GeneID:100518410 KEGG:ssc:100518410 Uniprot:F1S001
Length = 289
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 43/154 (27%), Positives = 72/154 (46%)
Query: 1 MLEAGVHFGHQTRFWNPKMSSYIFGHRNKIHIINLEKTLYMYEKAIRYIYQLGFSKGTLL 60
+ +A VH GH+ + M Y+FG R II+LE+T + A+ + + + +G +L
Sbjct: 83 LFDARVHLGHKAGCRHRFMEPYLFGSRLGQDIIDLEQTAAHLQLALNFTAHVAYREGIIL 142
Query: 61 FVGTKRQARGVIANEAVRAGMPFIDQRWL-GGLLTNFKTIKTSIQRLKEMDLFITNGSIR 119
FV RQ +I A G + R+ GGLLTN + RL ++ +F+ ++
Sbjct: 143 FVSRHRQFAHLIETTARDCG-EYAHTRYFKGGLLTNAPLLLGPGVRLPDLIIFLH--TLN 199
Query: 120 KLSKKEALLFYRKQMKLNRVIGGIKNMNIIPDAI 153
+ + + R K+N GI + N P I
Sbjct: 200 NVFEPHVAV--RDAAKMNIPTVGIVDTNCNPALI 231
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 164 AVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIALYTK 207
AV +A K+NIP +G+VDTN +P I Y +PGNDDS ++ L+ +
Sbjct: 207 AVRDAAKMNIPTVGIVDTNCNPALITYPVPGNDDSPPAVRLFCR 250
>UNIPROTKB|F1PBM5 [details] [associations]
symbol:METTL21B "Elongation factor Ts" species:9615 "Canis
lupus familiaris" [GO:0003746 "translation elongation factor
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005622 GO:GO:0003746 SUPFAM:SSF46934 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 OMA:FANCKKA
GeneTree:ENSGT00550000074572 EMBL:AAEX03006960 EMBL:AAEX03006959
Ensembl:ENSCAFT00000000451 Uniprot:F1PBM5
Length = 321
Score = 129 (50.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR +T + CKKAL G L +AE L + K + + R K+G+I +
Sbjct: 48 KLRRRTGYSFVNCKKALEACGGDLKQAESWLHKQAQKEGWSRAAKLHGRKTKEGLIGLLQ 107
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F + +++A
Sbjct: 108 DGNATVLVEVNCETDFVSRNLKFQQLVQQVA 138
Score = 39 (18.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILE 822
T E K S+ + R + S+D+E + + + L+ ++L+
Sbjct: 238 TSERKASLEDLGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYLLD 287
>UNIPROTKB|P43897 [details] [associations]
symbol:TSFM "Elongation factor Ts, mitochondrial"
species:9606 "Homo sapiens" [GO:0003746 "translation elongation
factor activity" evidence=IEA] [GO:0032784 "regulation of
DNA-dependent transcription, elongation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0005634 EMBL:CH471054 GO:GO:0003746
EMBL:AC025165 SUPFAM:SSF46934 GO:GO:0006414 eggNOG:COG0264
KO:K02357 Gene3D:3.30.479.20 PANTHER:PTHR11741 SUPFAM:SSF54713
CTD:10102 HOGENOM:HOG000220988 HOVERGEN:HBG005571 OMA:FANCKKA
OrthoDB:EOG48PMKQ EMBL:AF110399 EMBL:AK304621 EMBL:AK308981
EMBL:BC022862 EMBL:BC093068 EMBL:L37936 IPI:IPI00021016
IPI:IPI00216260 IPI:IPI00916152 IPI:IPI00956590 PIR:I84606
RefSeq:NP_001166166.1 RefSeq:NP_001166167.1 RefSeq:NP_001166168.1
RefSeq:NP_005717.3 UniGene:Hs.632704 PDB:2CP9 PDBsum:2CP9
ProteinModelPortal:P43897 SMR:P43897 IntAct:P43897
MINT:MINT-3297563 STRING:P43897 PhosphoSite:P43897 DMDM:12644268
PaxDb:P43897 PRIDE:P43897 Ensembl:ENST00000323833
Ensembl:ENST00000454289 Ensembl:ENST00000540550
Ensembl:ENST00000543727 GeneID:10102 KEGG:hsa:10102 UCSC:uc001sqh.3
UCSC:uc001sqi.3 GeneCards:GC12P058176 HGNC:HGNC:12367 HPA:HPA006204
MIM:604723 MIM:610505 neXtProt:NX_P43897 Orphanet:168566
PharmGKB:PA37037 EvolutionaryTrace:P43897 GenomeRNAi:10102
NextBio:38213 ArrayExpress:P43897 Bgee:P43897 CleanEx:HS_TSFM
Genevestigator:P43897 GermOnline:ENSG00000123297 GO:GO:0032784
Uniprot:P43897
Length = 325
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 221 ELRSKTLAPIMECKKALIEANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
+LR KT + CKKAL G L +AE L + K K + R K+G+I +
Sbjct: 52 KLRRKTGYSFVNCKKALETCGGDLKQAEIWLHKEAQKEGWSKAAKLQGRKTKEGLIGLLQ 111
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKIA 307
LVE+NCETDFV++N +F +++A
Sbjct: 112 EGNTTVLVEVNCETDFVSRNLKFQLLVQQVA 142
Score = 37 (18.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/50 (18%), Positives = 22/50 (44%)
Query: 773 TEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYDIQKLTDKFILE 822
T E K ++ + R + S+D+E + + + L+ ++L+
Sbjct: 242 TSEQKTNLEDVGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYLLD 291
>UNIPROTKB|G3X7D8 [details] [associations]
symbol:MRRF "Ribosome-recycling factor, mitochondrial"
species:9913 "Bos taurus" [GO:0006412 "translation" evidence=IEA]
InterPro:IPR002661 Pfam:PF01765 GO:GO:0006412 InterPro:IPR023584
SUPFAM:SSF55194 PANTHER:PTHR20982 GeneTree:ENSGT00390000005084
EMBL:DAAA02032027 Ensembl:ENSBTAT00000024516 Uniprot:G3X7D8
Length = 84
Score = 104 (41.7 bits), Expect = 0.00013, P = 0.00013
Identities = 27/84 (32%), Positives = 43/84 (51%)
Query: 752 VSIPPLTKERREEIVKLIKNITEETKISIRKIRRDSNEXXXXXXXXXXXSVDNEYRAQYD 811
V +P +T+E RE +VKL K T + K S+RK+R +N S D +
Sbjct: 2 VPVPGVTREHREMLVKLAKQNTNKAKDSLRKVR--TNAINKVKKSKDKASEDTIRLIEKQ 59
Query: 812 IQKLTDKFILEINQLLINKEKEIL 835
I ++ D + E+++ L K KE+L
Sbjct: 60 ISQMADDTVAELDRHLAVKTKELL 83
>WB|WBGene00010094 [details] [associations]
symbol:tsfm-1 species:6239 "Caenorhabditis elegans"
[GO:0003746 "translation elongation factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006414
"translational elongation" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
HAMAP:MF_00050 InterPro:IPR000449 InterPro:IPR001816
InterPro:IPR009060 InterPro:IPR014039 InterPro:IPR018101
Pfam:PF00627 Pfam:PF00889 PROSITE:PS01126 PROSITE:PS01127
GO:GO:0005739 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0003746
SUPFAM:SSF46934 eggNOG:COG0264 KO:K02357 Gene3D:3.30.479.20
PANTHER:PTHR11741 SUPFAM:SSF54713 TIGRFAMs:TIGR00116
GeneTree:ENSGT00390000016293 HOGENOM:HOG000220988 OMA:FANCKKA
EMBL:D87850 EMBL:Z78198 PIR:T22713 RefSeq:NP_506079.1
UniGene:Cel.19688 ProteinModelPortal:Q20819 SMR:Q20819
DIP:DIP-25617N MINT:MINT-1104171 STRING:Q20819 PaxDb:Q20819
EnsemblMetazoa:F55C5.5 GeneID:179683 KEGG:cel:CELE_F55C5.5
UCSC:F55C5.5 CTD:179683 WormBase:F55C5.5 InParanoid:Q20819
NextBio:906442 Uniprot:Q20819
Length = 316
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 40/151 (26%), Positives = 67/151 (44%)
Query: 222 LRSKTLAPIMECKKALIE-ANGKLSKAEEILRIKLGK----KILNISNRNAKDGVIAIYI 276
LR KT + C+KALI+ + A + L+ K K + R +G++++
Sbjct: 33 LRKKTGYSYVNCRKALIQFGENDMDSAVKWLKEAAAKEGWAKAAKLGTRVTSNGLVSVVT 92
Query: 277 SEKVGSLVEINCETDFVAKNNEFIKFSKKI-----AKLITENTPXXXXXXXXXXXXXXXX 331
++VE++CETDFVA++ F I AK ++
Sbjct: 93 DNSTAAVVELSCETDFVARSGAFKDLLSNISNSVLAKAKPQSISSGSKLQEFTYDLGDLT 152
Query: 332 TVDEK-CKELIS----RIGENIKIRRFKLFK 357
D K +E++S ++GEN+ +RR K FK
Sbjct: 153 DSDGKNMREVLSLSIGKLGENMTVRRVKAFK 183
>WB|WBGene00020718 [details] [associations]
symbol:mrps-2 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0009306 "protein secretion"
evidence=IMP] InterPro:IPR001865 InterPro:IPR005706 Pfam:PF00318
PRINTS:PR00395 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0009306
GO:GO:0003735 GO:GO:0015935 InterPro:IPR023591 PANTHER:PTHR12534
SUPFAM:SSF52313 HOGENOM:HOG000071892 eggNOG:COG0052
GeneTree:ENSGT00390000017382 OMA:YAHTRYW EMBL:FO081628 PIR:T32224
RefSeq:NP_505180.1 ProteinModelPortal:O17004 SMR:O17004
STRING:O17004 PaxDb:O17004 EnsemblMetazoa:T23B12.3.1
EnsemblMetazoa:T23B12.3.2 GeneID:179229 KEGG:cel:CELE_T23B12.3
UCSC:T23B12.3.1 CTD:179229 WormBase:T23B12.3 InParanoid:O17004
NextBio:904474 Uniprot:O17004
Length = 264
Score = 115 (45.5 bits), Expect = 0.00095, P = 0.00095
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 149 IPDAIFIID----VGYHKGAVSEAIKLNIPIIGVVDTNHSPDGINYVIPGNDDSAKSIAL 204
+PDA+ + +G + A+ EA K+ IP IGVVD+N P + Y++P NDD+ +S
Sbjct: 182 LPDAVCFLSTLTSLGENHPAIVEAAKMAIPTIGVVDSNSDPAYLTYLVPANDDTPQS--- 238
Query: 205 YTKGIVDAFLDAKTVGELRSK 225
T+ ++ F +A G+ K
Sbjct: 239 -TEYLLRMFKEAVRKGQEERK 258
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 837 767 0.00092 121 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 120
No. of states in DFA: 609 (65 KB)
Total size of DFA: 320 KB (2164 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.76u 0.14s 62.90t Elapsed: 00:00:34
Total cpu time: 62.78u 0.14s 62.92t Elapsed: 00:00:34
Start: Thu Aug 15 12:58:23 2013 End: Thu Aug 15 12:58:57 2013
WARNINGS ISSUED: 1