BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13352
(451 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A9IK31|SYA_BORPD Alanine--tRNA ligase OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=alaS PE=3 SV=1
Length = 873
Score = 617 bits (1591), Expect = e-176, Method: Compositional matrix adjust.
Identities = 283/446 (63%), Positives = 341/446 (76%), Gaps = 8/446 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGHTIVPS+SL+P ND +LLFTNSGMVQFKDVF G E R+Y RA
Sbjct: 1 MKSSEIRQKFLQFFQSKGHTIVPSASLVPGNDPTLLFTNSGMVQFKDVFTGKETRSYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++Q+ WELLTQ+Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIQYAWELLTQVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DD+ Y+IW ++GVP+ER+IRIGD K S Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYQEDDQAYDIWATEVGVPRERIIRIGDNKGS-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF ++ + +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFERD-----AAGNMTPLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ V++NYE DLF+ LI+AAARET NL++NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQGVHSNYEIDLFQNLIRAAARETGVTNLEDNSLKVIADHIRACAFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NEGRGYVLRRI+RRA+R+GYKLGQ F YKLV DL+ Y EL + ++ +
Sbjct: 295 VIPSNEGRGYVLRRIVRRALRHGYKLGQTKPFFYKLVPDLVAEMGQAYPELTQAAERVAQ 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKP--DKLDGKLAFILYDTYGFPIDLTIDICKEHN 418
+LK+EEE F +TL++G+KIL+ L P +LDG F LYDTYGFP+DLT DIC+E N
Sbjct: 355 VLKQEEERFGETLEHGMKILDGALAGVPAGGQLDGTTLFTLYDTYGFPVDLTADICRERN 414
Query: 419 VSFNKNDFILEMEKQRNNARLNSKFK 444
V + F M +QR+ AR KFK
Sbjct: 415 VEVDMAGFDAAMARQRDQARAAGKFK 440
>sp|Q7VXE1|SYA_BORPE Alanine--tRNA ligase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=alaS PE=3 SV=1
Length = 874
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 279/446 (62%), Positives = 337/446 (75%), Gaps = 8/446 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGHTIVPSSSL+P ND +LLFTNSGMVQFKDVF G E R Y RA
Sbjct: 1 MKSSEIRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK E++Q+ WELLTQ+Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF ++ + + +LPK CVDTG
Sbjct: 180 EIFYDHGPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERD-----AAGNMERLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LI AAARET +L +NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQKLIAAAARETGVKDLADNSLKVIADHIRACAFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
+ P NEGRGYVLRRI+RRA+R+GYKLGQ F ++LV DL+ Y EL ++ +
Sbjct: 295 IIPSNEGRGYVLRRIVRRALRHGYKLGQTKSFFHRLVPDLVAEMGEAYPELAQVAERVAQ 354
Query: 361 ILKKEEECFRKTLKYGIKILENIL--LTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHN 418
+L++EEE F +TL++G+KIL+ L + K D LDG F LYDTYGFP+DLT DIC+E
Sbjct: 355 VLRQEEERFGETLEHGMKILDGALAKVAKGDPLDGTTLFTLYDTYGFPVDLTADICRERE 414
Query: 419 VSFNKNDFILEMEKQRNNARLNSKFK 444
V + F M++QR AR KFK
Sbjct: 415 VEVDMAGFEAAMQRQREQARAAGKFK 440
>sp|Q7WHL6|SYA_BORBR Alanine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=alaS PE=3 SV=1
Length = 874
Score = 609 bits (1570), Expect = e-173, Method: Compositional matrix adjust.
Identities = 279/446 (62%), Positives = 337/446 (75%), Gaps = 8/446 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGHTIVPSSSL+P ND +LLFTNSGMVQFKDVF G E R Y RA
Sbjct: 1 MKSSEIRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK E++Q+ WELLTQ+Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYRLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF ++ + + +LPK CVDTG
Sbjct: 180 EIFYDHGPEIWGGPPGSPEEDGDRYIEIWNLVFMQFERD-----AAGNMERLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LI AAARET +L +NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQKLIAAAARETGVKDLADNSLKVIADHIRACAFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
+ P NEGRGYVLRRI+RRA+R+GYKLGQ F ++LV DL+ Y EL ++ +
Sbjct: 295 IIPSNEGRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELAQVAERVAQ 354
Query: 361 ILKKEEECFRKTLKYGIKILENIL--LTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHN 418
+L++EEE F +TL++G+KIL+ L + K D LDG F LYDTYGFP+DLT DIC+E
Sbjct: 355 VLRQEEERFGETLEHGMKILDGALAKVAKGDPLDGTTLFTLYDTYGFPVDLTADICRERG 414
Query: 419 VSFNKNDFILEMEKQRNNARLNSKFK 444
V + F M++QR AR KFK
Sbjct: 415 VEVDMAGFEAAMQRQREQARAAGKFK 440
>sp|Q7W6N4|SYA_BORPA Alanine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=alaS PE=3 SV=1
Length = 874
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 278/446 (62%), Positives = 337/446 (75%), Gaps = 8/446 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGHTIVPSSSL+P ND +LLFTNSGMVQFKDVF G E R Y RA
Sbjct: 1 MKSSEIRQKFLQFFQSKGHTIVPSSSLVPANDPTLLFTNSGMVQFKDVFTGKEARAYKRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK E++Q+ WELLTQ+Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTQVYRLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF ++ + + +LPK CVDTG
Sbjct: 180 EIFYDHGPEIWGGPPGSLEEDGDRYIEIWNLVFMQFERD-----AAGNMERLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LI AAARET +L +NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQKLIAAAARETGVKDLADNSLKVIADHIRACAFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
+ P NEGRGYVLRRI+RRA+R+GYKLGQ F ++LV DL+ Y EL ++ +
Sbjct: 295 IIPSNEGRGYVLRRIVRRALRHGYKLGQTKPFFHRLVPDLVAEMGEAYPELAQVAERVAQ 354
Query: 361 ILKKEEECFRKTLKYGIKILENIL--LTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHN 418
+L++EE+ F +TL++G+KIL+ L + K D LDG F LYDTYGFP+DLT DIC+E
Sbjct: 355 VLRQEEKRFGETLEHGMKILDGALAKVAKGDPLDGTTLFTLYDTYGFPVDLTADICRERG 414
Query: 419 VSFNKNDFILEMEKQRNNARLNSKFK 444
V + F M++QR AR KFK
Sbjct: 415 VEVDMAGFEAAMQRQREQARAAGKFK 440
>sp|B2JK72|SYA_BURP8 Alanine--tRNA ligase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=alaS PE=3 SV=1
Length = 874
Score = 603 bits (1556), Expect = e-172, Method: Compositional matrix adjust.
Identities = 279/448 (62%), Positives = 341/448 (76%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 KEKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTPLPKQCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKAAARETN ++L NNSLKV+ADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKAAARETNIDDLSNNSLKVVADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGSFFHKLVADLVAQMGGAYPELKDAEQRVTH 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG++AF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEGALADLDSKGGKTLDGEVAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDEAMARQREQARAAGKFK 442
>sp|Q2KY72|SYA_BORA1 Alanine--tRNA ligase OS=Bordetella avium (strain 197N) GN=alaS PE=3
SV=1
Length = 873
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 279/446 (62%), Positives = 335/446 (75%), Gaps = 8/446 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGH+IVPSSSL+P ND +LLFTNSGMVQFKDVF G EKR Y RA
Sbjct: 1 MKSSEIRQKFLQFFQSKGHSIVPSSSLVPGNDPTLLFTNSGMVQFKDVFTGKEKRPYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++++ WELLT +Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAIRFAWELLTTVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
+E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPC+
Sbjct: 121 VEKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF ++ + +T LPK CVDTG
Sbjct: 180 EIFYDHGPDIWGGPPGSPEEDGDRYIEIWNLVFMQFERD-----AAGNMTPLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ V++NYE DLF+ LI AAARET +L +NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQGVHSNYEIDLFQKLITAAARETGVQDLHDNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NEGRGYVLRRI+RRA+R+GYKLGQ F Y+LV DL+ Y EL ++ +
Sbjct: 295 VIPSNEGRGYVLRRIVRRALRHGYKLGQTKPFFYRLVPDLVAQMGEAYPELANMAERVGQ 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK--LDGKLAFILYDTYGFPIDLTIDICKEHN 418
+LK+EEE F +TL++G+KIL+ L P LDG F LYDTYGFP+DLT DIC+E
Sbjct: 355 VLKQEEERFGETLEHGMKILDVALAQVPKGGLLDGNTLFTLYDTYGFPVDLTADICRERE 414
Query: 419 VSFNKNDFILEMEKQRNNARLNSKFK 444
V + F ME+QR+ AR KFK
Sbjct: 415 VEIDMAGFEAAMERQRDQARAAGKFK 440
>sp|Q474F4|SYA_CUPPJ Alanine--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 /
LMG 1197) GN=alaS PE=3 SV=1
Length = 874
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 280/448 (62%), Positives = 345/448 (77%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK +I +KFL FF+SKGHT+V SSSL+P ND +LLFTNSGMVQFKDVFLG +KR Y RA
Sbjct: 1 MKVSDIRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK E++Q+ WELLT++Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER++RIGD K S Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYAEDDEAYDIWAKEVGVPTERIVRIGDNKGS-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIF+D G G PPGS E G+RYIEIWN VFMQFN++ + G+ +T LPK CVDTG
Sbjct: 180 EIFFDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRD---EQGN--MTPLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKAAARET+ +NL NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKAAARETHIDNLNQNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLGQ + F +KLV DL+ Y EL + ++ E
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVADLVAQMGEAYPELADAQGRVTE 354
Query: 361 ILKKEEECFRKTLKYGIKILENIL----LTKPDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+LK EEE F +T++ G+ IL+ L L LDG+LAF L+DT+GFP+DLT D+C+E
Sbjct: 355 VLKAEEERFFETIENGMSILDAALADLKLKGGKTLDGELAFKLHDTFGFPLDLTQDVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 QEIAVDEAAFDAAMNRQREQARAAGKFK 442
>sp|Q13W97|SYA_BURXL Alanine--tRNA ligase OS=Burkholderia xenovorans (strain LB400)
GN=alaS PE=3 SV=1
Length = 874
Score = 600 bits (1547), Expect = e-171, Method: Compositional matrix adjust.
Identities = 275/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE ++IW ++GVP ER+IRIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 KDKLWVTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTPLPKQCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKAAARET ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKAAARETGVSDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +++V DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGKKGSFFHRMVADLVAQMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLT----KPDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEGALAELEAGSSKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 REVTVDEAAFDEAMTRQREQARAAGKFK 442
>sp|A9AC16|SYA_BURM1 Alanine--tRNA ligase OS=Burkholderia multivorans (strain ATCC 17616
/ 249) GN=alaS PE=3 SV=1
Length = 874
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 275/448 (61%), Positives = 343/448 (76%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG ++R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDRRPYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYMLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEVSDLNNNSLKVIADHIRACAFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGAFFHKLVADLVAEMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE+ L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILESALADLEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q8Y193|SYA_RALSO Alanine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
GN=alaS PE=3 SV=1
Length = 884
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 284/452 (62%), Positives = 351/452 (77%), Gaps = 9/452 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ +I KFL+FF++KGHT+V SS L+P ND +LLFTNSGMVQFKDVFLG +KR Y+RA
Sbjct: 1 MKASDIRQKFLTFFETKGHTVVRSSPLVPGNDPTLLFTNSGMVQFKDVFLGTDKRPYVRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
S+QRCLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ++L W WELLTQ Y L
Sbjct: 61 ASVQRCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDALVWAWELLTQEYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW TVY TDDE Y+IWT IG+P ERV+RIGD K +P Y SDNFWQM++TGPCGPCS
Sbjct: 121 ADKLWATVYQTDDEAYDIWTKVIGLPPERVVRIGDNKGAP-YASDNFWQMAETGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWNNVFMQF+++++P+TG LT LP CVDTG
Sbjct: 180 EIFYDHGPEIWGGPPGSPEADGDRYIEIWNNVFMQFDRQLDPQTGEYTLTPLPAPCVDTG 239
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MG+ERLA+ILQ+V++NYE DLF+ L+ AAARETN +L NNSL+VIADHIRAC FLI+DG
Sbjct: 240 MGMERLAAILQHVHSNYEIDLFQALVSAAARETNTKDLANNSLRVIADHIRACAFLIVDG 299
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRIIRRAIR+GYKLG + F +KLV DL+ Y EL+ + ++ +
Sbjct: 300 VIPGNEGRGYVLRRIIRRAIRHGYKLGCRAAFFHKLVDDLVKEMGEAYPELREARDRVVD 359
Query: 361 ILKKEEECFRKTLKYGIKILENIL-----LTKPDK---LDGKLAFILYDTYGFPIDLTID 412
+L+ EE F +T+++G+ IL+ L K +K LDG+LAF L+DTYGFP+DLT D
Sbjct: 360 VLRTEEARFFETIEHGMSILDGALGELKAAGKDEKQRMLDGELAFKLHDTYGFPLDLTQD 419
Query: 413 ICKEHNVSFNKNDFILEMEKQRNNARLNSKFK 444
+C+E++V ++ F M +QR AR KFK
Sbjct: 420 VCRENDVIVDEAAFDAAMNRQREQARAAGKFK 451
>sp|B2SZN0|SYA_BURPP Alanine--tRNA ligase OS=Burkholderia phytofirmans (strain DSM 17436
/ PsJN) GN=alaS PE=3 SV=1
Length = 874
Score = 594 bits (1531), Expect = e-169, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAESRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTGVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE ++IW ++GVP ER+IRIGD K + Y SDNFWQM+D GPCGPCS
Sbjct: 121 KDKLWVTVYHEDDEAHDIWAKEVGVPVERIIRIGDNKGA-RYASDNFWQMADVGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQF+++ +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFSRDAQG-----NMTPLPKQCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKAA RET ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKAAGRETGVSDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +++V DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGKKGSFFHRMVADLVAQMGDAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE+ L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILESALADLEAKGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 REVTVDEAAFDEAMARQREQARAAGKFK 442
>sp|Q63TF9|SYA_BURPS Alanine--tRNA ligase OS=Burkholderia pseudomallei (strain K96243)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q3JT87|SYA_BURP1 Alanine--tRNA ligase OS=Burkholderia pseudomallei (strain 1710b)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A3NUB0|SYA_BURP0 Alanine--tRNA ligase OS=Burkholderia pseudomallei (strain 1106a)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A1V3F2|SYA_BURMS Alanine--tRNA ligase OS=Burkholderia mallei (strain SAVP1) GN=alaS
PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A2S3D4|SYA_BURM9 Alanine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10229)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A3MJ36|SYA_BURM7 Alanine--tRNA ligase OS=Burkholderia mallei (strain NCTC 10247)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A3N8K7|SYA_BURP6 Alanine--tRNA ligase OS=Burkholderia pseudomallei (strain 668)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1529), Expect = e-169, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q62KZ3|SYA_BURMA Alanine--tRNA ligase OS=Burkholderia mallei (strain ATCC 23344)
GN=alaS PE=3 SV=1
Length = 874
Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTSVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ + F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKAPFFHKLVADLVAEMGAAYPELKEAEPRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTK----PDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAELDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A4JDM9|SYA_BURVG Alanine--tRNA ligase OS=Burkholderia vietnamiensis (strain G4 / LMG
22486) GN=alaS PE=3 SV=1
Length = 874
Score = 592 bits (1527), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG ++R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDQRPYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTETADLNNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGAFFHKLVADLVAEMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q39HB7|SYA_BURS3 Alanine--tRNA ligase OS=Burkholderia sp. (strain 383) GN=alaS PE=3
SV=2
Length = 874
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 341/448 (76%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ + Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGSFFHKLVADLVAEMGVAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEGALADVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|B1YNJ6|SYA_BURA4 Alanine--tRNA ligase OS=Burkholderia ambifaria (strain MC40-6)
GN=alaS PE=3 SV=1
Length = 874
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KEKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPEVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGSFFHKLVADLVAEMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q0BG79|SYA_BURCM Alanine--tRNA ligase OS=Burkholderia ambifaria (strain ATCC BAA-244
/ AMMD) GN=alaS PE=3 SV=1
Length = 874
Score = 592 bits (1525), Expect = e-168, Method: Compositional matrix adjust.
Identities = 274/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIRFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KEKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGSFFHKLVADLVAEMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q1LQ59|SYA_RALME Alanine--tRNA ligase OS=Ralstonia metallidurans (strain CH34 / ATCC
43123 / DSM 2839) GN=alaS PE=3 SV=2
Length = 874
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 342/448 (76%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK +I +KFL FF+SKGHT+V SSSL+P ND +LLFTNSGMVQFKDVFLG +KR Y+RA
Sbjct: 1 MKVSDIRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYVRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK E++Q+ WELLT++Y L
Sbjct: 61 TSSQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKREAIQYAWELLTKVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP +R++RIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 ADKLWVTVYAEDDEAYDIWAKEVGVPADRIVRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + G+ +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRD---EQGT--MTPLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIK A RET+ +L NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKGAGRETHIADLNQNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLGQ + F +KLV DL+ Y EL + ++ E
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGQKTPFFHKLVGDLVAQMGEAYPELAEAQSRVVE 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+LK EEE F +T++ G+ IL+ + K LDG+LAF L+DT+GFP+DLT D+ +E
Sbjct: 355 VLKAEEERFFETIENGMSILDAAVADLKAKGGKVLDGELAFKLHDTFGFPLDLTQDVARE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 QEITVDEAAFDAAMTRQREQARAAGKFK 442
>sp|B1K026|SYA_BURCC Alanine--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=alaS PE=3 SV=1
Length = 874
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGAFFHKLVADLVAEMGTAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALADVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A0K6N4|SYA_BURCH Alanine--tRNA ligase OS=Burkholderia cenocepacia (strain HI2424)
GN=alaS PE=3 SV=2
Length = 874
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGAFFHKLVADLVAEMGTAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAEVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|Q1BX19|SYA_BURCA Alanine--tRNA ligase OS=Burkholderia cenocepacia (strain AU 1054)
GN=alaS PE=3 SV=2
Length = 874
Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust.
Identities = 272/448 (60%), Positives = 339/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +L+FTNSGMVQFKDVFLG + R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDPRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HH FF+MLGN+SFGDYFK++++++ WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHAFFEMLGNFSFGDYFKHDAIKFAWELLTTVYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFW M DTGPCGPC+
Sbjct: 121 KDKLWVTVYQEDDEAYDIWAKEVGVPTERIIRIGDNKGA-RYASDNFWTMGDTGPCGPCT 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK VDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKQSVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA++LQ+V++NYE DLF+ LIKAAAR T ++L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERLAAVLQHVHSNYEIDLFQNLIKAAARVTEISDLTNNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGAFFHKLVADLVAEMGTAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDK----LDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE L K LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALAEVEAKGGKVLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
++ ++ F M +QR AR KFK
Sbjct: 415 RGMTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A9C0B9|SYA_DELAS Alanine--tRNA ligase OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=alaS PE=3 SV=1
Length = 874
Score = 584 bits (1506), Expect = e-166, Method: Compositional matrix adjust.
Identities = 274/440 (62%), Positives = 332/440 (75%), Gaps = 6/440 (1%)
Query: 5 EICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQ 64
+I FL FF SKGHTIV SS L+P ND +L+FTNSGMVQFKDVFLG +KR Y RATS+Q
Sbjct: 10 DIRKSFLDFFASKGHTIVESSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYKRATSVQ 69
Query: 65 RCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERL 124
CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ESL+W WELLT++Y L ERL
Sbjct: 70 TCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPKERL 129
Query: 125 WITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFY 184
TVY DDE Y+IWT +IG+P ERVIRIGD K Y SDNFW M+DTGPCGPCSEIFY
Sbjct: 130 LATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGG-RYKSDNFWMMADTGPCGPCSEIFY 188
Query: 185 DCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLE 244
D G+ G PPGS + G+R+IEIWNNVFMQF+ + + G++K LP CVDTGMGLE
Sbjct: 189 DHGAHVAGGPPGSPDEDGDRFIEIWNNVFMQFDMD---EQGNVK--PLPAPCVDTGMGLE 243
Query: 245 RLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPG 304
RLA+ILQ+V++NYE DLF+ LIKAAARET+ +++ SLKVIADHIRA FL+ DGV P
Sbjct: 244 RLAAILQHVHSNYEIDLFQALIKAAARETHIADIETPSLKVIADHIRATAFLVADGVIPS 303
Query: 305 NEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKK 364
NEGRGYV RRI+RRAIR+GYKLGQ + F +KLVKDL+ Y +++ +I E+L+
Sbjct: 304 NEGRGYVQRRIVRRAIRHGYKLGQKTPFFHKLVKDLVAVMGDAYPKIREQEARITEVLRV 363
Query: 365 EEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKN 424
EEE F +TL G++IL+ L L G +AF L+DTYGFP+DLT D+C+E +S ++
Sbjct: 364 EEERFFETLANGMEILDAALAGGAKVLPGDVAFKLHDTYGFPLDLTNDVCRERGLSVDEA 423
Query: 425 DFILEMEKQRNNARLNSKFK 444
F ME+Q+N AR KFK
Sbjct: 424 GFQTAMEEQKNKARAAGKFK 443
>sp|A1W7D0|SYA_ACISJ Alanine--tRNA ligase OS=Acidovorax sp. (strain JS42) GN=alaS PE=3
SV=1
Length = 874
Score = 583 bits (1504), Expect = e-166, Method: Compositional matrix adjust.
Identities = 270/440 (61%), Positives = 332/440 (75%), Gaps = 6/440 (1%)
Query: 5 EICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQ 64
+I FL FF +KGHT+V SS L+P ND +L+FTNSGMVQFKDVFLG +KR Y+RATS+Q
Sbjct: 10 DIRKTFLDFFAAKGHTVVASSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYVRATSVQ 69
Query: 65 RCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERL 124
CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ESL+W WELLT++Y L ERL
Sbjct: 70 TCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPPERL 129
Query: 125 WITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFY 184
TVY DDE Y+IWT +IG+P ERVIRIGD K Y SDNFW M+DTGPCGPCSEIFY
Sbjct: 130 LATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGG-RYKSDNFWMMADTGPCGPCSEIFY 188
Query: 185 DCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLE 244
D G G PPGS + G+R+IEIWNNVFMQF+ + + G++K LP CVDTGMGLE
Sbjct: 189 DHGEHIAGGPPGSPDEDGDRFIEIWNNVFMQFDMD---EQGNVK--PLPAPCVDTGMGLE 243
Query: 245 RLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPG 304
RLA+ILQ+V++NYE DLF LIKAAARET ++L N SLKVIADHIRA FL+ DGV P
Sbjct: 244 RLAAILQHVHSNYEIDLFDALIKAAARETGTSDLTNPSLKVIADHIRATAFLVADGVIPS 303
Query: 305 NEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKK 364
NEGRGYV RRI+RRAIR+GYKLG+ + F +KLV+DL+ Y +++ +I ++L+
Sbjct: 304 NEGRGYVQRRIVRRAIRHGYKLGRKTPFFHKLVQDLVQQMGDAYPKIREQQARITDVLRV 363
Query: 365 EEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKN 424
EEE F +TL +G++IL++ L L G +AF L+DTYGFP+DLT D+C+E V+ ++
Sbjct: 364 EEERFFETLAHGMEILDSALAGGAKTLPGDVAFKLHDTYGFPLDLTNDVCRERGVNVDEA 423
Query: 425 DFILEMEKQRNNARLNSKFK 444
F ME Q++ AR KFK
Sbjct: 424 GFATAMEHQKSTARAAGKFK 443
>sp|Q2SV73|SYA_BURTA Alanine--tRNA ligase OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=alaS PE=3 SV=1
Length = 874
Score = 578 bits (1491), Expect = e-164, Method: Compositional matrix adjust.
Identities = 276/448 (61%), Positives = 340/448 (75%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK+ EI KFL FF+SKGHTIV SSSL+P ND +LLFTNSGMVQFKDVFLG E R Y RA
Sbjct: 1 MKAAEIREKFLKFFESKGHTIVRSSSLVPGNDPTLLFTNSGMVQFKDVFLGAETRPYSRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
T+ QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT +Y L
Sbjct: 61 TTAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAIHYAWELLTTVYKLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++LW+TVY DDE Y+IW ++GVP ER+IRIGD K + Y SDNFWQM DTGPCGPCS
Sbjct: 121 ADKLWVTVYHDDDEAYDIWAKEVGVPAERIIRIGDNKGA-RYASDNFWQMGDTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ +T+LPK CVDTG
Sbjct: 180 EIFYDHGPGVWGGPPGSPEEDGDRYIEIWNLVFMQFNRDAQG-----NMTRLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKA+ARET +L NNSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQQLIKASARETGVADLANNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRI+RRAIR+GYKLG+ F +KLV DL+ Y ELK + ++ +
Sbjct: 295 VIPGNEGRGYVLRRIVRRAIRHGYKLGRKGPFFHKLVADLVAEMGAAYPELKEAEQRVTD 354
Query: 361 ILKKEEECFRKTLKYGIKILE----NILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+L++EEE F +T+++G+ ILE ++ LDG+LAF L+DTYGFP+DLT D+C+E
Sbjct: 355 VLRQEEERFFETIEHGMSILEAALADLDAAGGKTLDGELAFKLHDTYGFPLDLTADVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F M +QR AR KFK
Sbjct: 415 RGVTVDEPAFDDAMARQREQARAAGKFK 442
>sp|A6SVH6|SYA_JANMA Alanine--tRNA ligase OS=Janthinobacterium sp. (strain Marseille)
GN=alaS PE=3 SV=1
Length = 869
Score = 577 bits (1486), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/444 (63%), Positives = 334/444 (75%), Gaps = 6/444 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
M S EI KFL FF+SKGHTIV SS L+P ND +L+FTNSGMVQFKDVFLG +KR Y RA
Sbjct: 1 MNSSEIREKFLKFFESKGHTIVASSPLVPGNDPTLMFTNSGMVQFKDVFLGEDKRPYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS+Q CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ++L+W+WELLTQ+YGL
Sbjct: 61 TSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDALKWSWELLTQVYGLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+L TVYI DDE ++IWT +IG+P ERVIRIGD K Y SDNFW M+DTGPCGPCS
Sbjct: 121 AEKLLATVYIEDDEAFDIWTKEIGLPPERVIRIGDNKGG-RYKSDNFWMMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS + G+R+IEIWNNVFMQF+ + GS+K LP CVDTG
Sbjct: 180 EIFYDHGPHIAGGPPGSPDEDGDRFIEIWNNVFMQFDM---AEDGSVK--PLPAPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA+ILQ+V++NYE D F+ LIKAA RETN +L NNSLKVIADHIRA FL+ DG
Sbjct: 235 MGLERLAAILQHVHSNYEIDTFEALIKAAGRETNTKDLSNNSLKVIADHIRATAFLVADG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NEGRGYV RRIIRRAIR+GYKLGQ F +KLVKDL+ Y +LK +I +
Sbjct: 295 VIPSNEGRGYVQRRIIRRAIRHGYKLGQKKPFFHKLVKDLVEQMGEAYPKLKADAQRITD 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVS 420
+LK EEE F +TL G++IL+ L L G++AF L+DT+GFP+DL+ D+C+E +S
Sbjct: 355 VLKAEEERFFETLANGMEILDAALAGDAKVLPGEVAFKLHDTFGFPLDLSADVCRERGLS 414
Query: 421 FNKNDFILEMEKQRNNARLNSKFK 444
++ F MEKQ+ R KFK
Sbjct: 415 VDEAGFAAAMEKQKAAGRAAGKFK 438
>sp|Q0K823|SYA_CUPNH Alanine--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=alaS PE=3 SV=1
Length = 874
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/448 (61%), Positives = 342/448 (76%), Gaps = 10/448 (2%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MK +I +KFL FF+SKGHT+V SSSL+P ND +LLFTNSGMVQFKDVFLG +KR Y RA
Sbjct: 1 MKVSDIRSKFLQFFESKGHTVVRSSSLVPANDPTLLFTNSGMVQFKDVFLGTDKRPYTRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS QR +RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK +++ + WELLT+ Y L
Sbjct: 61 TSAQRSVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKRDAILYAWELLTKTYQLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
E+LW+TVY DDE Y+IW ++GVP ER++RIGD K + Y SDNFWQM+DTGPCGPCS
Sbjct: 121 AEKLWVTVYAEDDEAYDIWAKEVGVPAERIVRIGDNKGA-RYASDNFWQMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIE+WN VFMQFN++ + G+ +T LPK CVDTG
Sbjct: 180 EIFYDHGPDVWGGPPGSPEEDGDRYIEVWNLVFMQFNRD---EQGN--MTPLPKPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V++NYE DLF+ LIKAAARET+ +NL NSLKVIADHIRAC FLI+DG
Sbjct: 235 MGLERIAAVLQHVHSNYEIDLFQALIKAAARETHIDNLNQNSLKVIADHIRACSFLIVDG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V PGNEGRGYVLRRIIRRAIR+GYKLGQ + F +K+V DL+ Y EL + ++ E
Sbjct: 295 VIPGNEGRGYVLRRIIRRAIRHGYKLGQKTPFFHKMVADLVEQMGQAYPELAEAQSRVTE 354
Query: 361 ILKKEEECFRKTLKYGIKILENIL----LTKPDKLDGKLAFILYDTYGFPIDLTIDICKE 416
+LK EEE F +T++ G+ IL+ L L LDG+LAF L+DT+GFP+DLT D+C+E
Sbjct: 355 VLKAEEERFFETIENGMSILDAALADLKLKGGKTLDGELAFKLHDTFGFPLDLTQDVCRE 414
Query: 417 HNVSFNKNDFILEMEKQRNNARLNSKFK 444
+ ++ F M +QR AR KFK
Sbjct: 415 QEIGVDEAAFDAAMNRQREQARAAGKFK 442
>sp|A4G2S9|SYA_HERAR Alanine--tRNA ligase OS=Herminiimonas arsenicoxydans GN=alaS PE=3
SV=1
Length = 869
Score = 574 bits (1479), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/444 (63%), Positives = 332/444 (74%), Gaps = 6/444 (1%)
Query: 1 MKSIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRA 60
MKS EI KFL FF+SKGHTIV SS L+P ND +L+FTNSGMVQFKDVFLG +KR Y+RA
Sbjct: 1 MKSSEIREKFLKFFESKGHTIVASSPLVPGNDPTLMFTNSGMVQFKDVFLGEDKRPYVRA 60
Query: 61 TSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLS 120
TS+Q CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ++L W+WELLT++YGL
Sbjct: 61 TSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDALMWSWELLTKVYGLP 120
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
++L TVYI D E Y+IWT +IG+P ERVIRIGD K Y SDNFW M+DTGPCGPCS
Sbjct: 121 GDKLLATVYIEDQEAYDIWTKEIGLPPERVIRIGDNKGG-RYKSDNFWMMADTGPCGPCS 179
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS + G+RYIEIWNNVFMQF+ + G++K LP CVDTG
Sbjct: 180 EIFYDHGPHIAGGPPGSPDEDGDRYIEIWNNVFMQFDM---AEDGTVK--PLPAPCVDTG 234
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLERLA+ILQ V++NYE D F LIKAA RETN +L NNSLKVIADHIRA FL+ DG
Sbjct: 235 MGLERLAAILQGVHSNYEIDTFAALIKAAGRETNTKDLTNNSLKVIADHIRATAFLVADG 294
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NEGRGYV RRIIRRAIR+GYKLGQ F +KLVKDL+ Y +L+ +I E
Sbjct: 295 VIPSNEGRGYVQRRIIRRAIRHGYKLGQKKPFFHKLVKDLVEQMGEAYPKLQADAQRITE 354
Query: 361 ILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVS 420
+LK EEE F +TL G++IL+ L L G++AF L+DT+GFP+DL+ D+C+E VS
Sbjct: 355 VLKAEEERFFETLANGMEILDAALAGGVKVLPGEVAFKLHDTFGFPLDLSADVCREAGVS 414
Query: 421 FNKNDFILEMEKQRNNARLNSKFK 444
++ F MEKQ+ R KFK
Sbjct: 415 VDEAGFAAAMEKQKAAGRAAGKFK 438
>sp|Q221G2|SYA_RHOFD Alanine--tRNA ligase OS=Rhodoferax ferrireducens (strain DSM 15236
/ ATCC BAA-621 / T118) GN=alaS PE=3 SV=1
Length = 876
Score = 571 bits (1472), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/435 (62%), Positives = 327/435 (75%), Gaps = 6/435 (1%)
Query: 10 FLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQRCLRA 69
FL FF SKGHT+VPSS L+P ND +L+FTNSGMVQFKDVFLG +KR+Y+RA S+Q CLRA
Sbjct: 17 FLDFFASKGHTVVPSSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRSYVRAASVQACLRA 76
Query: 70 GGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERLWITVY 129
GGKHNDLENVGYT HHTFF+MLGNWSFGDYFK +SL+W WELLT++Y L ++LW TVY
Sbjct: 77 GGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRDSLKWGWELLTKVYKLPADKLWATVY 136
Query: 130 ITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFYDCGST 189
I DDE YNIWT +IG+P ERV+RIGD K + Y SDNFW M+DTGPCGPCSEIFYD G
Sbjct: 137 IDDDEAYNIWTQEIGLPPERVVRIGDNKGAK-YASDNFWMMADTGPCGPCSEIFYDHGPA 195
Query: 190 FHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLERLASI 249
G PPGS E G+RYIEIWN+VFMQ++ + + GS+K LP CVDTGMGLERLA+I
Sbjct: 196 IAGGPPGSPEQDGDRYIEIWNHVFMQYDMQPD---GSVK--PLPAPCVDTGMGLERLAAI 250
Query: 250 LQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPGNEGRG 309
LQ+V++NYE D+F LIKAAARET C +L N SL+VIADHIRA FL+ DGV P NEGRG
Sbjct: 251 LQHVHSNYEIDIFDALIKAAARETGCTDLGNKSLRVIADHIRATAFLVSDGVLPSNEGRG 310
Query: 310 YVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKKEEECF 369
YV RRIIRRAIR+GYKLGQ + F YKLV DL+ Y L +I ++L+ EEE F
Sbjct: 311 YVQRRIIRRAIRHGYKLGQKAPFFYKLVPDLVTLMGEAYPGLATQAERIAQVLQAEEERF 370
Query: 370 RKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKNDFILE 429
+TL G++IL+ L L G +AF L+DT+GFP+DL+ D+C+E V ++ F
Sbjct: 371 FETLANGMQILDETLTGDAKVLPGDVAFKLHDTFGFPLDLSADVCRERGVEVDEAGFHAA 430
Query: 430 MEKQRNNARLNSKFK 444
MEKQ+ R KF+
Sbjct: 431 MEKQKAQGRAAGKFR 445
>sp|Q129G8|SYA_POLSJ Alanine--tRNA ligase OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=alaS PE=3 SV=1
Length = 878
Score = 570 bits (1468), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/440 (62%), Positives = 330/440 (75%), Gaps = 6/440 (1%)
Query: 5 EICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATSIQ 64
+I FL FF SKGHT+VPSSSL+P ND +L+FTNSGMVQFKDVFLG +KR+Y+RA S+Q
Sbjct: 14 DIRKSFLDFFASKGHTVVPSSSLVPGNDPTLMFTNSGMVQFKDVFLGTDKRSYVRAASVQ 73
Query: 65 RCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIYGLSIERL 124
CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ESL+W WELLT +Y L ++L
Sbjct: 74 ACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTDVYKLPADKL 133
Query: 125 WITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCSEIFY 184
W TVYI DDE Y+IWT +IG+P ERV+RIGD K + Y SDNFW M+DTGPCGPCSEIFY
Sbjct: 134 WATVYIDDDEAYDIWTKEIGLPPERVVRIGDNKGAK-YASDNFWMMADTGPCGPCSEIFY 192
Query: 185 DCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTGMGLE 244
D G G PPGS E G+RYIEIWNNVFMQF+ + + GS+K LP CVDTGMGLE
Sbjct: 193 DHGPEIAGGPPGSPEQDGDRYIEIWNNVFMQFDMQPD---GSVK--PLPAPCVDTGMGLE 247
Query: 245 RLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDGVFPG 304
RLA+ILQ+V++NYE D+F LIKAAARET +L N SL+VIADHIRA FL+ DGV P
Sbjct: 248 RLAAILQHVHSNYEIDVFDALIKAAARETGEKDLNNKSLRVIADHIRATAFLVSDGVNPS 307
Query: 305 NEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEEILKK 364
NEGRGYV RRIIRRAIR+GYKLG+ + F +KLV DL Y +L+ +I +LK
Sbjct: 308 NEGRGYVQRRIIRRAIRHGYKLGKKTPFFHKLVADLARLMGDAYPKLRTDEARITAVLKA 367
Query: 365 EEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNVSFNKN 424
EEE F +TL+ G+ IL+ L L G +AF L+DTYGFP+DL+ D+C+E V ++
Sbjct: 368 EEERFFETLEIGMTILDTALAGGAKVLPGDVAFKLHDTYGFPLDLSADVCRERGVDVDET 427
Query: 425 DFILEMEKQRNNARLNSKFK 444
F M++Q+N AR KFK
Sbjct: 428 GFNAAMDRQKNQARAAGKFK 447
>sp|A1WIG8|SYA_VEREI Alanine--tRNA ligase OS=Verminephrobacter eiseniae (strain EF01-2)
GN=alaS PE=3 SV=1
Length = 872
Score = 566 bits (1459), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/447 (61%), Positives = 330/447 (73%), Gaps = 9/447 (2%)
Query: 1 MKSIEICN---KFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNY 57
M SI + + FL FF +KGHTIV SS L+P ND +L+FTNSGMVQFKDVFLG +KR Y
Sbjct: 1 MPSISVADIRKSFLDFFVAKGHTIVASSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPY 60
Query: 58 LRATSIQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLTQIY 117
RA S+Q CLRAGGKHNDLENVGYT HHTFF+MLGNWSFGDYFK ESLQW WELLT++Y
Sbjct: 61 SRAVSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLQWAWELLTEVY 120
Query: 118 GLSIERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCG 177
L ERL TVY DDE Y+IWT +IG+P ERVIRIGD K Y SDNFW M+DTGPCG
Sbjct: 121 RLPAERLLATVYQDDDEAYDIWTREIGLPPERVIRIGDNKGG-RYKSDNFWMMADTGPCG 179
Query: 178 PCSEIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCV 237
PCSEIFYD G G PPGS + G+R+IEIWNNVFMQFN + GS+ T LP CV
Sbjct: 180 PCSEIFYDHGPGIPGGPPGSPDEDGDRFIEIWNNVFMQFNMAAD---GSV--TPLPAPCV 234
Query: 238 DTGMGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLI 297
DTGMGLERLA++LQ V++NYE DLF+ LI AA+RET +L + SL+VIADHIRA FL+
Sbjct: 235 DTGMGLERLAAVLQQVHSNYEIDLFEQLIAAASRETGEKDLGHKSLRVIADHIRASAFLV 294
Query: 298 IDGVFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIK 357
DGV PG+EGRGYV RRI+RRAIR+GY+LGQ + FL++LV DL+ Y L+ +
Sbjct: 295 SDGVLPGSEGRGYVQRRIMRRAIRHGYQLGQRAPFLHRLVADLVRLMGAAYPSLRAQQQR 354
Query: 358 IEEILKKEEECFRKTLKYGIKILENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEH 417
I +ILK EEE F +TL +G++IL+ L L G +AF L+DTYGFP+DL+ D+C+E
Sbjct: 355 IADILKAEEERFFETLAHGMEILDAALDGGAKLLPGDVAFKLHDTYGFPLDLSADMCRER 414
Query: 418 NVSFNKNDFILEMEKQRNNARLNSKFK 444
V+ ++ F L ME+Q+ AR KFK
Sbjct: 415 GVAVDEAGFHLAMERQKTQARAAGKFK 441
>sp|A9MFZ1|SYA_SALAR Alanine--tRNA ligase OS=Salmonella arizonae (strain ATCC BAA-731 /
CDC346-86 / RSK2980) GN=alaS PE=3 SV=2
Length = 876
Score = 566 bits (1458), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 328/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDEAYGIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NYE DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYEIDLFRTLIEAVAKVTGATDLSNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E ++
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERDI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFETAMEEQRRRAREASGF 442
>sp|Q5PF17|SYA_SALPA Alanine--tRNA ligase OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=alaS PE=3 SV=1
Length = 876
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 329/444 (74%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDETY IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDETYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEVGFEAAMEEQRRRAREASGF 442
>sp|A9N0C1|SYA_SALPB Alanine--tRNA ligase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=alaS PE=3 SV=1
Length = 876
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 328/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----AMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q57KU6|SYA_SALCH Alanine--tRNA ligase OS=Salmonella choleraesuis (strain SC-B67)
GN=alaS PE=3 SV=1
Length = 876
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 328/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVSSSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----AMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q8ZMK6|SYA_SALTY Alanine--tRNA ligase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=alaS PE=3 SV=1
Length = 876
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 328/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGATDLGNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q8Z4D5|SYA_SALTI Alanine--tRNA ligase OS=Salmonella typhi GN=alaS PE=3 SV=1
Length = 876
Score = 565 bits (1455), Expect = e-160, Method: Compositional matrix adjust.
Identities = 263/444 (59%), Positives = 328/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P+ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPNNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTGENWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY TDDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYETDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FL+ DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIEAVAKVTGSTDLGNKSLRVIADHIRSCAFLVADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI +ELK ++E+
Sbjct: 299 VLPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIEVMGSAGEELKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLQGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q1R804|SYA_ECOUT Alanine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNESRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFDAAMEEQRRRAREASGF 442
>sp|A1AEN7|SYA_ECOK1 Alanine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=alaS PE=3
SV=1
Length = 876
Score = 563 bits (1452), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNESRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFDAAMEEQRRRAREASGF 442
>sp|B1IUY2|SYA_ECOLC Alanine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=alaS PE=3 SV=1
Length = 876
Score = 563 bits (1451), Expect = e-160, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPANENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q0TEI3|SYA_ECOL5 Alanine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=alaS PE=3 SV=1
Length = 876
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q32CN1|SYA_SHIDS Alanine--tRNA ligase OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=alaS PE=3 SV=1
Length = 876
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|A8A3H4|SYA_ECOHS Alanine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS) GN=alaS
PE=3 SV=1
Length = 876
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|Q3YYG6|SYA_SHISS Alanine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=alaS PE=3
SV=1
Length = 876
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
>sp|B1LQ15|SYA_ECOSM Alanine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 262/444 (59%), Positives = 327/444 (73%), Gaps = 9/444 (2%)
Query: 3 SIEICNKFLSFFKSKGHTIVPSSSLIPDNDSSLLFTNSGMVQFKDVFLGIEKRNYLRATS 62
+ EI FL FF SKGH +V SSSL+P ND +LLFTN+GM QFKDVFLG++KRNY RAT+
Sbjct: 5 TAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATT 64
Query: 63 IQRCLRAGGKHNDLENVGYTNYHHTFFQMLGNWSFGDYFKYESLQWTWELLT--QIYGLS 120
QRC+RAGGKHNDLENVGYT HHTFF+MLGN+SFGDYFK++++Q+ WELLT + + L
Sbjct: 65 SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAIQFAWELLTSEKWFALP 124
Query: 121 IERLWITVYITDDETYNIWTNKIGVPKERVIRIGDKKNSPLYTSDNFWQMSDTGPCGPCS 180
ERLW+TVY +DDE Y IW ++G+P+ER+IRIGD K +P Y SDNFWQM DTGPCGPC+
Sbjct: 125 KERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAP-YASDNFWQMGDTGPCGPCT 183
Query: 181 EIFYDCGSTFHGNPPGSKENFGNRYIEIWNNVFMQFNKEINPKTGSIKLTKLPKYCVDTG 240
EIFYD G G PPGS E G+RYIEIWN VFMQFN++ + + LPK VDTG
Sbjct: 184 EIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADG-----TMEPLPKPSVDTG 238
Query: 241 MGLERLASILQNVYNNYETDLFKTLIKAAARETNCNNLKNNSLKVIADHIRACVFLIIDG 300
MGLER+A++LQ+V +NY+ DLF+TLI+A A+ T +L N SL+VIADHIR+C FLI DG
Sbjct: 239 MGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADG 298
Query: 301 VFPGNEGRGYVLRRIIRRAIRYGYKLGQNSIFLYKLVKDLIFNTYIIYKELKISVIKIEE 360
V P NE RGYVLRRIIRRA+R+G LG F YKLV LI ++LK ++E+
Sbjct: 299 VMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQ 358
Query: 361 ILKKEEECFRKTLKYGIKIL-ENILLTKPDKLDGKLAFILYDTYGFPIDLTIDICKEHNV 419
+LK EEE F +TL+ G+ +L E + D LDG+ AF LYDTYGFP+DLT D+C+E N+
Sbjct: 359 VLKTEEEQFARTLERGLALLDEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNI 418
Query: 420 SFNKNDFILEMEKQRNNARLNSKF 443
++ F ME+QR AR S F
Sbjct: 419 KVDEAGFEAAMEEQRRRAREASGF 442
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,377,533
Number of Sequences: 539616
Number of extensions: 8221152
Number of successful extensions: 22736
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 18145
Number of HSP's gapped (non-prelim): 875
length of query: 451
length of database: 191,569,459
effective HSP length: 121
effective length of query: 330
effective length of database: 126,275,923
effective search space: 41671054590
effective search space used: 41671054590
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)