Psyllid ID: psy13353
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | 2.2.26 [Sep-21-2011] | |||||||
| A4G8X1 | 599 | Aspartate--tRNA ligase OS | yes | N/A | 0.988 | 0.981 | 0.658 | 0.0 | |
| B1XWR8 | 598 | Aspartate--tRNA ligase OS | yes | N/A | 0.986 | 0.981 | 0.610 | 0.0 | |
| Q8Y270 | 605 | Aspartate--tRNA ligase OS | yes | N/A | 0.988 | 0.971 | 0.603 | 0.0 | |
| Q0KEG8 | 602 | Aspartate--tRNA ligase OS | yes | N/A | 0.998 | 0.986 | 0.604 | 0.0 | |
| Q475W2 | 602 | Aspartate--tRNA ligase OS | yes | N/A | 0.998 | 0.986 | 0.599 | 0.0 | |
| B2AH15 | 602 | Aspartate--tRNA ligase OS | yes | N/A | 0.998 | 0.986 | 0.601 | 0.0 | |
| Q1LRG2 | 602 | Aspartate--tRNA ligase OS | yes | N/A | 0.988 | 0.976 | 0.605 | 0.0 | |
| Q145N3 | 599 | Aspartate--tRNA ligase OS | yes | N/A | 0.994 | 0.988 | 0.604 | 0.0 | |
| B2SX42 | 599 | Aspartate--tRNA ligase OS | yes | N/A | 0.994 | 0.988 | 0.603 | 0.0 | |
| A2SEP2 | 599 | Aspartate--tRNA ligase OS | yes | N/A | 0.986 | 0.979 | 0.607 | 0.0 |
| >sp|A4G8X1|SYD_HERAR Aspartate--tRNA ligase OS=Herminiimonas arsenicoxydans GN=aspS PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/588 (65%), Positives = 491/588 (83%)
Query: 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDIKIYKIA 60
MRT YCG +E LLDQ +SLCGWVHR+R+HGG+IFIDLRD GLVQ+V DP+ + ++K A
Sbjct: 1 MRTQYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAA 60
Query: 61 KIIRNEFCLQIIGKVCSRPNKTNNTNLISGNIEILCRELKILNSSITLPFQIDEKNILEV 120
+ +RNEFCL+I G V RP T N+NL SG IE+L EL++LN S+T PFQ+D+ N+ E
Sbjct: 61 EAVRNEFCLRITGIVRHRPEGTTNSNLTSGKIEVLAHELEVLNPSVTPPFQLDDDNLSET 120
Query: 121 TNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLVP 180
T L +RVL LR MQ NLRLRYKVTMEVRKFLD++ FI+IETP+L+KSTPEGARDYLVP
Sbjct: 121 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 180
Query: 181 SRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSFM 240
SR+N G FFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLR+DRQPEFTQIDCETSFM
Sbjct: 181 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFM 240
Query: 241 NEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTNI 300
NE+EIR+LFE MIR++F LN++LPNPFPV++++TA+ +YGSDKPDM +KL FTDLT+I
Sbjct: 241 NEQEIRDLFEGMIRLVFKNCLNVELPNPFPVMDYATAMGMYGSDKPDMRVKLEFTDLTSI 300
Query: 301 MKDSDFKLFSKIANMKNGRIIGLKIPGGFSISRNEINYYTQFVKTYGAKGLTYIKIHKIS 360
MKD +FK+FS ANM+NGR++GL++PGG ++ R+EI+ YTQFV YGAKGL YIK+++ +
Sbjct: 301 MKDVEFKVFSGAANMENGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNEKA 360
Query: 361 KEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYSDF 420
K DGL+SPI+K ++ L KII T AQ+GD+IF G D+ +VN+ + ALR+K+G+SDF
Sbjct: 361 KGRDGLQSPIVKNIHDEALAKIIEATGAQDGDLIFFGADKAKVVNDAIGALRVKVGHSDF 420
Query: 421 GKRNNILNNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSKA 480
GK+N + +++W PLWV++FPMF+YD+ + W A HHPFTAPKDG+ED + TNP K SKA
Sbjct: 421 GKKNGLFDDEWRPLWVVDFPMFEYDEDSQRWSATHHPFTAPKDGHEDLMETNPGKCLSKA 480
Query: 481 YDLIINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIAF 540
YD+++NGWE+GGGS+RIH AE+Q K+F+ L I + + +FGFLL++L+YGAPPHGG+AF
Sbjct: 481 YDMVLNGWELGGGSVRIHRAEVQSKVFRALKISAEEAQLKFGFLLDALQYGAPPHGGLAF 540
Query: 541 GLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNI 588
GLDR++T+MTG++SIRDVIAFPKTQ AQCLLT APS VDEKQL EL+I
Sbjct: 541 GLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHI 588
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Herminiimonas arsenicoxydans (taxid: 204773) EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|B1XWR8|SYD_LEPCP Aspartate--tRNA ligase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8Y270|SYD_RALSO Aspartate--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q0KEG8|SYD_CUPNH Aspartate--tRNA ligase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q475W2|SYD_CUPPJ Aspartate--tRNA ligase OS=Cupriavidus pinatubonensis (strain JMP134 / LMG 1197) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|B2AH15|SYD_CUPTR Aspartate--tRNA ligase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q1LRG2|SYD_RALME Aspartate--tRNA ligase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|Q145N3|SYD_BURXL Aspartate--tRNA ligase OS=Burkholderia xenovorans (strain LB400) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|B2SX42|SYD_BURPP Aspartate--tRNA ligase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=aspS PE=3 SV=1 | Back alignment and function description |
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| >sp|A2SEP2|SYD_METPP Aspartate--tRNA ligase OS=Methylibium petroleiphilum (strain PM1) GN=aspS PE=3 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| 152979848 | 601 | aspartyl-tRNA synthetase [Janthinobacter | 0.988 | 0.978 | 0.653 | 0.0 | |
| 134096004 | 599 | aspartyl-tRNA synthetase [Herminiimonas | 0.988 | 0.981 | 0.658 | 0.0 | |
| 415921643 | 630 | Aspartyl-tRNA synthetase [Herbaspirillum | 0.998 | 0.942 | 0.648 | 0.0 | |
| 398837126 | 601 | aspartyl-tRNA synthetase [Herbaspirillum | 0.998 | 0.988 | 0.646 | 0.0 | |
| 409408795 | 601 | aspartyl-tRNA synthetase [Herbaspirillum | 0.998 | 0.988 | 0.646 | 0.0 | |
| 329906027 | 601 | Aspartyl-tRNA synthetase [Oxalobacterace | 0.998 | 0.988 | 0.641 | 0.0 | |
| 399018258 | 601 | aspartyl-tRNA synthetase [Herbaspirillum | 0.998 | 0.988 | 0.643 | 0.0 | |
| 300309541 | 599 | aspartyl-tRNA synthetase [Herbaspirillum | 0.998 | 0.991 | 0.644 | 0.0 | |
| 340785846 | 600 | aspartyl-tRNA synthetase [Collimonas fun | 0.988 | 0.98 | 0.646 | 0.0 | |
| 445494552 | 602 | aspartate-tRNA ligase AspS [Janthinobact | 0.998 | 0.986 | 0.629 | 0.0 |
| >gi|152979848|ref|YP_001354789.1| aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille] gi|151279925|gb|ABR88335.1| Aspartyl-tRNA synthetase [Janthinobacterium sp. Marseille] | Back alignment and taxonomy information |
|---|
Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/588 (65%), Positives = 493/588 (83%)
Query: 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDIKIYKIA 60
MRTHYCG +E LLDQ +SLCGWVHR+R+HGG+IFIDLRD GLVQ+V DP+ + ++K A
Sbjct: 3 MRTHYCGLTSEALLDQTVSLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRVDVFKAA 62
Query: 61 KIIRNEFCLQIIGKVCSRPNKTNNTNLISGNIEILCRELKILNSSITLPFQIDEKNILEV 120
+ +RNEFCL+I G V SRP T+N+NL SG IE+L EL++LN+S+T PFQ+D+ N+ E
Sbjct: 63 EAVRNEFCLRITGVVRSRPEGTSNSNLTSGKIEVLAHELEVLNASVTPPFQLDDDNLSET 122
Query: 121 TNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLVP 180
T L +RVL LR MQ NLRLRYKVTMEVRKFLD++ FI+IETP+L+KSTPEGARDYLVP
Sbjct: 123 TRLTHRVLDLRRPQMQNNLRLRYKVTMEVRKFLDAQGFIDIETPMLTKSTPEGARDYLVP 182
Query: 181 SRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSFM 240
SR+N G FFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLR+DRQPEFTQIDCETSFM
Sbjct: 183 SRVNAGHFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRADRQPEFTQIDCETSFM 242
Query: 241 NEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTNI 300
NE+EIR+LFE MIR++F LN+ LPNPFPV++++TA+ LYGSDKPDM +KL FTDLT+I
Sbjct: 243 NEQEIRDLFEGMIRLVFKNALNVDLPNPFPVMDYATAMGLYGSDKPDMRVKLAFTDLTSI 302
Query: 301 MKDSDFKLFSKIANMKNGRIIGLKIPGGFSISRNEINYYTQFVKTYGAKGLTYIKIHKIS 360
MKD +FK+FS ANM+ GR++GL++PGG ++ R+EI+ YTQFV YGAKGL YIK+++ +
Sbjct: 303 MKDVEFKVFSGAANMEGGRVVGLRVPGGGAMPRSEIDAYTQFVAIYGAKGLAYIKVNEKA 362
Query: 361 KEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYSDF 420
K DGL+SPI+K ++ L KII T A++GD+IF G D+ +VN+ + ALR+K+G+SDF
Sbjct: 363 KGRDGLQSPIVKNIHDEALAKIIEATGAEDGDLIFFGADKAKVVNDAIGALRVKVGHSDF 422
Query: 421 GKRNNILNNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSKA 480
GK++ + +++W PLWV++FPMF++D+ N W A HHPFTAPKDG+ED + T+P K +KA
Sbjct: 423 GKKSGLFDDEWRPLWVVDFPMFEFDEENQRWSATHHPFTAPKDGHEDLMETDPGKCIAKA 482
Query: 481 YDLIINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIAF 540
YD+++NGWE+GGGS+RIH A++Q K+F+ L I + + +FGFLL++L+YGAPPHGG+AF
Sbjct: 483 YDMVLNGWELGGGSVRIHRADVQSKVFRALKIGAEEAQLKFGFLLDALQYGAPPHGGLAF 542
Query: 541 GLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNI 588
GLDR++T+MTG++SIRDVIAFPKTQ AQCLLT APS VDEKQL EL+I
Sbjct: 543 GLDRIVTMMTGAESIRDVIAFPKTQRAQCLLTQAPSEVDEKQLRELHI 590
|
Source: Janthinobacterium sp. Marseille Species: Janthinobacterium sp. Marseille Genus: Janthinobacterium Family: Oxalobacteraceae Order: Burkholderiales Class: Betaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
| >gi|134096004|ref|YP_001101079.1| aspartyl-tRNA synthetase [Herminiimonas arsenicoxydans] gi|166225350|sp|A4G8X1.1|SYD_HERAR RecName: Full=Aspartate--tRNA ligase; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS gi|133739907|emb|CAL62958.1| Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS) [Herminiimonas arsenicoxydans] | Back alignment and taxonomy information |
|---|
| >gi|415921643|ref|ZP_11554557.1| Aspartyl-tRNA synthetase [Herbaspirillum frisingense GSF30] gi|407760783|gb|EKF69991.1| Aspartyl-tRNA synthetase [Herbaspirillum frisingense GSF30] | Back alignment and taxonomy information |
|---|
| >gi|398837126|ref|ZP_10594438.1| aspartyl-tRNA synthetase [Herbaspirillum sp. YR522] gi|398209420|gb|EJM96095.1| aspartyl-tRNA synthetase [Herbaspirillum sp. YR522] | Back alignment and taxonomy information |
|---|
| >gi|409408795|ref|ZP_11257230.1| aspartyl-tRNA synthetase [Herbaspirillum sp. GW103] gi|386432117|gb|EIJ44945.1| aspartyl-tRNA synthetase [Herbaspirillum sp. GW103] | Back alignment and taxonomy information |
|---|
| >gi|329906027|ref|ZP_08274328.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gi|327547359|gb|EGF32189.1| Aspartyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] | Back alignment and taxonomy information |
|---|
| >gi|399018258|ref|ZP_10720440.1| aspartyl-tRNA synthetase [Herbaspirillum sp. CF444] gi|398101782|gb|EJL91987.1| aspartyl-tRNA synthetase [Herbaspirillum sp. CF444] | Back alignment and taxonomy information |
|---|
| >gi|300309541|ref|YP_003773633.1| aspartyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gi|300072326|gb|ADJ61725.1| aspartyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] | Back alignment and taxonomy information |
|---|
| >gi|340785846|ref|YP_004751311.1| aspartyl-tRNA synthetase [Collimonas fungivorans Ter331] gi|340551113|gb|AEK60488.1| Aspartyl-tRNA synthetase [Collimonas fungivorans Ter331] | Back alignment and taxonomy information |
|---|
| >gi|445494552|ref|ZP_21461596.1| aspartate-tRNA ligase AspS [Janthinobacterium sp. HH01] gi|444790713|gb|ELX12260.1| aspartate-tRNA ligase AspS [Janthinobacterium sp. HH01] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 595 | ||||||
| TIGR_CMR|CBU_1565 | 590 | CBU_1565 "aspartyl-tRNA synthe | 0.984 | 0.993 | 0.517 | 1.8e-167 | |
| TIGR_CMR|SO_2433 | 591 | SO_2433 "aspartyl-tRNA synthet | 0.983 | 0.989 | 0.516 | 3e-165 | |
| UNIPROTKB|Q9KSU0 | 591 | aspS "Aspartate--tRNA ligase" | 0.988 | 0.994 | 0.491 | 7.3e-162 | |
| TIGR_CMR|VC_1166 | 591 | VC_1166 "aspartyl-tRNA synthet | 0.988 | 0.994 | 0.491 | 7.3e-162 | |
| UNIPROTKB|P21889 | 590 | aspS "aspartyl-tRNA synthetase | 0.988 | 0.996 | 0.493 | 1.4e-158 | |
| TIGR_CMR|CPS_2114 | 601 | CPS_2114 "aspartyl-tRNA synthe | 0.983 | 0.973 | 0.487 | 6.7e-152 | |
| TIGR_CMR|CHY_2204 | 592 | CHY_2204 "aspartyl-tRNA synthe | 0.969 | 0.974 | 0.471 | 1.9e-147 | |
| TIGR_CMR|BA_4632 | 591 | BA_4632 "aspartyl-tRNA synthet | 0.968 | 0.974 | 0.458 | 3.7e-142 | |
| TIGR_CMR|GSU_1463 | 594 | GSU_1463 "aspartyl-tRNA synthe | 0.969 | 0.971 | 0.471 | 3e-140 | |
| TIGR_CMR|CJE_0743 | 583 | CJE_0743 "aspartyl-tRNA synthe | 0.963 | 0.982 | 0.468 | 7.4e-137 |
| TIGR_CMR|CBU_1565 CBU_1565 "aspartyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 1629 (578.5 bits), Expect = 1.8e-167, P = 1.8e-167
Identities = 307/593 (51%), Positives = 425/593 (71%)
Query: 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDIKIYKIA 60
MRTHY + L+DQ I+LCGWVHR+R+HGG+IFIDLRD GLVQ+V +P + ++K+A
Sbjct: 1 MRTHYADKVDSSLIDQTITLCGWVHRRRDHGGLIFIDLRDREGLVQVVCNPTESTVFKVA 60
Query: 61 KIIRNEFCLQIIGKVCSRPNKTNNTNLISGNIEILCRELKILNSSITLPFQIDE-KNILE 119
+ +RNE+ +++ GKV RP T N ++ SG +EI ++ +LN S LPF IDE + + E
Sbjct: 61 ESLRNEYVIKVTGKVHKRPEGTVNPHIPSGEVEIAASDITLLNKSKPLPFNIDEYQEVSE 120
Query: 120 VTNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLV 179
LK+R L LR + + L++R + E+R+FLD + F++IETP+L+KSTPEGARDYLV
Sbjct: 121 EVRLKFRYLDLRRPEVAQRLKMRSYIIREIRRFLDERGFLDIETPMLTKSTPEGARDYLV 180
Query: 180 PSRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSF 239
PSR +PG+FFALPQSPQ+FK++LMVA FDRYYQI +CFRDEDLR+DRQPEFTQ+D E SF
Sbjct: 181 PSRTHPGQFFALPQSPQIFKEILMVAGFDRYYQIVRCFRDEDLRADRQPEFTQLDLEMSF 240
Query: 240 MNEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTN 299
+ E++I+ L E MIR +F LN+ LP+PFP I + AIK YG+D+PD+ L D+T+
Sbjct: 241 VEEKDIQQLMETMIRHLFSTFLNVPLPDPFPRITYDEAIKTYGTDRPDLRNPLTLVDVTD 300
Query: 300 IMKDSDFKLFSKIANMKNGRIIGLKIPGGFSISRNEINYYTQFVKTYGAKGLTYIKIHKI 359
+MK +FK+F + AN +GRI L++P G +SR I+ YTQFV YGAKGL YIK+ I
Sbjct: 301 LMKSVEFKVFKEPANNPHGRIAVLRLPKGAELSRKAIDDYTQFVGIYGAKGLAYIKVENI 360
Query: 360 SKEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYSD 419
GL SPI+K+ ++ +I+ +T+AQ+GDI+F G D+ IVN + ALR ++ +D
Sbjct: 361 DNGTGGLHSPILKFLPENVIAEILKRTQAQSGDILFFGADKAKIVNESLGALRDRL-CAD 419
Query: 420 FGKRNNILNNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSK 479
N+ +W P+WV++FPMF + + + W A HHPFTA ++ + +I NP + S+
Sbjct: 420 L----NLYEGQWKPVWVVDFPMFDREDVGD-WQALHHPFTALQETDPEKVIANPGDVLSR 474
Query: 480 AYDLIINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIA 539
AYD+++NG EIGGGSIRI+D +Q + KVL I ++ + QFG LL +L++G+PP GGIA
Sbjct: 475 AYDMVLNGSEIGGGSIRINDIGMQYAVLKVLGISKEMAEAQFGHLLMALQFGSPPLGGIA 534
Query: 540 FGLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNILYKK 592
FGLDRL+ IMTG+ SIRDVIAFPKTQ+AQC LTNAP+ V+ QL L + K
Sbjct: 535 FGLDRLVAIMTGASSIRDVIAFPKTQTAQCPLTNAPAQVETLQLETLGLKVSK 587
|
|
| TIGR_CMR|SO_2433 SO_2433 "aspartyl-tRNA synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9KSU0 aspS "Aspartate--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|VC_1166 VC_1166 "aspartyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P21889 aspS "aspartyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CPS_2114 CPS_2114 "aspartyl-tRNA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CHY_2204 CHY_2204 "aspartyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|BA_4632 BA_4632 "aspartyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|GSU_1463 GSU_1463 "aspartyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CJE_0743 CJE_0743 "aspartyl-tRNA synthetase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A1V745 | SYD_BURMS | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9916 | yes | N/A |
| Q7WR42 | SYD_BORBR | 6, ., 1, ., 1, ., 1, 2 | 0.5952 | 0.9882 | 0.9865 | yes | N/A |
| A1WHI6 | SYD_VEREI | 6, ., 1, ., 1, ., 1, 2 | 0.5962 | 0.9865 | 0.9718 | yes | N/A |
| Q39D20 | SYD_BURS3 | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| Q62MP0 | SYD_BURMA | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9949 | yes | N/A |
| Q7W001 | SYD_BORPE | 6, ., 1, ., 1, ., 1, 2 | 0.5952 | 0.9882 | 0.9865 | yes | N/A |
| A2S8L9 | SYD_BURM9 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9916 | yes | N/A |
| C5CWX8 | SYD_VARPS | 6, ., 1, ., 1, ., 1, 2 | 0.5869 | 0.9983 | 0.9883 | yes | N/A |
| B4EBD1 | SYD_BURCJ | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| A9AFC7 | SYD_BURM1 | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| B9ME28 | SYD_ACIET | 6, ., 1, ., 1, ., 1, 2 | 0.5895 | 0.9865 | 0.9734 | yes | N/A |
| Q5P280 | SYD_AROAE | 6, ., 1, ., 1, ., 1, 2 | 0.5699 | 0.9865 | 0.9799 | yes | N/A |
| Q9K0U5 | SYD_NEIMB | 6, ., 1, ., 1, ., 1, 2 | 0.5822 | 0.9915 | 0.9800 | yes | N/A |
| Q8Y270 | SYD_RALSO | 6, ., 1, ., 1, ., 1, 2 | 0.6037 | 0.9882 | 0.9719 | yes | N/A |
| A0KAE8 | SYD_BURCH | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| A3N5V6 | SYD_BURP6 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9916 | yes | N/A |
| A9IHE2 | SYD_BORPD | 6, ., 1, ., 1, ., 1, 2 | 0.6003 | 0.9865 | 0.9865 | yes | N/A |
| A1KAJ9 | SYD_AZOSB | 6, ., 1, ., 1, ., 1, 2 | 0.5784 | 0.9865 | 0.9799 | yes | N/A |
| A4JHR9 | SYD_BURVG | 6, ., 1, ., 1, ., 1, 2 | 0.5932 | 1.0 | 0.9916 | yes | N/A |
| Q7W275 | SYD_BORPA | 6, ., 1, ., 1, ., 1, 2 | 0.5952 | 0.9882 | 0.9865 | yes | N/A |
| A3MNU6 | SYD_BURM7 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9916 | yes | N/A |
| Q0BBZ1 | SYD_BURCM | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| A9M257 | SYD_NEIM0 | 6, ., 1, ., 1, ., 1, 2 | 0.5771 | 0.9915 | 0.9800 | yes | N/A |
| B2SX42 | SYD_BURPP | 6, ., 1, ., 1, ., 1, 2 | 0.6030 | 0.9949 | 0.9883 | yes | N/A |
| B1YWF2 | SYD_BURA4 | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| Q3JVY8 | SYD_BURP1 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9949 | yes | N/A |
| Q475W2 | SYD_CUPPJ | 6, ., 1, ., 1, ., 1, 2 | 0.5993 | 0.9983 | 0.9867 | yes | N/A |
| Q145N3 | SYD_BURXL | 6, ., 1, ., 1, ., 1, 2 | 0.6047 | 0.9949 | 0.9883 | yes | N/A |
| Q63X93 | SYD_BURPS | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9949 | yes | N/A |
| B2JCV5 | SYD_BURP8 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9933 | yes | N/A |
| A3NRK2 | SYD_BURP0 | 6, ., 1, ., 1, ., 1, 2 | 0.5949 | 1.0 | 0.9916 | yes | N/A |
| A1TT99 | SYD_ACIAC | 6, ., 1, ., 1, ., 1, 2 | 0.5878 | 0.9865 | 0.9718 | yes | N/A |
| Q0KEG8 | SYD_CUPNH | 6, ., 1, ., 1, ., 1, 2 | 0.6043 | 0.9983 | 0.9867 | yes | N/A |
| A1W4E1 | SYD_ACISJ | 6, ., 1, ., 1, ., 1, 2 | 0.5895 | 0.9865 | 0.9734 | yes | N/A |
| A9BP37 | SYD_DELAS | 6, ., 1, ., 1, ., 1, 2 | 0.5884 | 0.9865 | 0.9783 | yes | N/A |
| Q1LRG2 | SYD_RALME | 6, ., 1, ., 1, ., 1, 2 | 0.6054 | 0.9882 | 0.9767 | yes | N/A |
| Q9JT23 | SYD_NEIMA | 6, ., 1, ., 1, ., 1, 2 | 0.5771 | 0.9915 | 0.9800 | yes | N/A |
| B1JYI9 | SYD_BURCC | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| B1XWR8 | SYD_LEPCP | 6, ., 1, ., 1, ., 1, 2 | 0.6105 | 0.9865 | 0.9816 | yes | N/A |
| A2SEP2 | SYD_METPP | 6, ., 1, ., 1, ., 1, 2 | 0.6071 | 0.9865 | 0.9799 | yes | N/A |
| Q21YX2 | SYD_RHOFD | 6, ., 1, ., 1, ., 1, 2 | 0.5926 | 0.9865 | 0.9607 | yes | N/A |
| Q2L1K6 | SYD_BORA1 | 6, ., 1, ., 1, ., 1, 2 | 0.5875 | 0.9983 | 0.9966 | yes | N/A |
| Q47IE0 | SYD_DECAR | 6, ., 1, ., 1, ., 1, 2 | 0.5767 | 0.9865 | 0.9799 | yes | N/A |
| A4G8X1 | SYD_HERAR | 6, ., 1, ., 1, ., 1, 2 | 0.6581 | 0.9882 | 0.9816 | yes | N/A |
| Q82SQ5 | SYD_NITEU | 6, ., 1, ., 1, ., 1, 2 | 0.5731 | 0.9915 | 0.9949 | yes | N/A |
| C1DB91 | SYD_LARHH | 6, ., 1, ., 1, ., 1, 2 | 0.5692 | 0.9966 | 0.9834 | yes | N/A |
| B2AH15 | SYD_CUPTR | 6, ., 1, ., 1, ., 1, 2 | 0.6010 | 0.9983 | 0.9867 | yes | N/A |
| Q2T132 | SYD_BURTA | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
| Q1GYN8 | SYD_METFK | 6, ., 1, ., 1, ., 1, 2 | 0.5666 | 0.9882 | 0.9898 | yes | N/A |
| Q1BTP1 | SYD_BURCA | 6, ., 1, ., 1, ., 1, 2 | 0.5915 | 1.0 | 0.9916 | yes | N/A |
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 6.1.1.12 | 0.991 |
| 3rd Layer | 6.1.1 | 0.976 |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 595 | |||
| PRK00476 | 588 | PRK00476, aspS, aspartyl-tRNA synthetase; Validate | 0.0 | |
| COG0173 | 585 | COG0173, AspS, Aspartyl-tRNA synthetase [Translati | 0.0 | |
| TIGR00459 | 583 | TIGR00459, aspS_bact, aspartyl-tRNA synthetase, ba | 0.0 | |
| PLN02903 | 652 | PLN02903, PLN02903, aminoacyl-tRNA ligase | 0.0 | |
| PRK12820 | 706 | PRK12820, PRK12820, bifunctional aspartyl-tRNA syn | 0.0 | |
| cd00777 | 280 | cd00777, AspRS_core, Asp tRNA synthetase (aspRS) c | 2e-87 | |
| pfam00152 | 345 | pfam00152, tRNA-synt_2, tRNA synthetases class II | 1e-74 | |
| cd00777 | 280 | cd00777, AspRS_core, Asp tRNA synthetase (aspRS) c | 8e-73 | |
| cd04317 | 135 | cd04317, EcAspRS_like_N, EcAspRS_like_N: N-termina | 4e-58 | |
| pfam00152 | 345 | pfam00152, tRNA-synt_2, tRNA synthetases class II | 9e-54 | |
| PRK05159 | 437 | PRK05159, aspC, aspartyl-tRNA synthetase; Provisio | 3e-51 | |
| COG0017 | 435 | COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetas | 1e-49 | |
| cd00669 | 269 | cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA syn | 3e-46 | |
| TIGR00458 | 428 | TIGR00458, aspS_nondisc, nondiscriminating asparty | 2e-42 | |
| cd00669 | 269 | cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA syn | 4e-36 | |
| cd04100 | 85 | cd04100, Asp_Lys_Asn_RS_N, Asp_Lys_Asn_RS_N: N-ter | 2e-27 | |
| cd00776 | 322 | cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/As | 9e-23 | |
| pfam02938 | 94 | pfam02938, GAD, GAD domain | 7e-22 | |
| PRK03932 | 450 | PRK03932, asnC, asparaginyl-tRNA synthetase; Valid | 2e-21 | |
| TIGR00499 | 496 | TIGR00499, lysS_bact, lysyl-tRNA synthetase, eukar | 3e-21 | |
| TIGR00457 | 453 | TIGR00457, asnS, asparaginyl-tRNA synthetase | 8e-21 | |
| cd00768 | 211 | cd00768, class_II_aaRS-like_core, Class II tRNA am | 1e-20 | |
| COG1190 | 502 | COG1190, LysU, Lysyl-tRNA synthetase (class II) [T | 2e-20 | |
| PLN02850 | 530 | PLN02850, PLN02850, aspartate-tRNA ligase | 2e-20 | |
| PRK05159 | 437 | PRK05159, aspC, aspartyl-tRNA synthetase; Provisio | 9e-19 | |
| PLN02502 | 553 | PLN02502, PLN02502, lysyl-tRNA synthetase | 2e-18 | |
| cd00776 | 322 | cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/As | 1e-17 | |
| PRK00484 | 491 | PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | 5e-17 | |
| COG0017 | 435 | COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetas | 3e-15 | |
| PRK12445 | 505 | PRK12445, PRK12445, lysyl-tRNA synthetase; Reviewe | 3e-15 | |
| cd04316 | 108 | cd04316, ND_PkAspRS_like_N, ND_PkAspRS_like_N: N-t | 2e-14 | |
| pfam01336 | 75 | pfam01336, tRNA_anti, OB-fold nucleic acid binding | 1e-13 | |
| PRK06462 | 335 | PRK06462, PRK06462, asparagine synthetase A; Revie | 2e-13 | |
| cd00775 | 329 | cd00775, LysRS_core, Lys_tRNA synthetase (LysRS) c | 2e-13 | |
| PLN02850 | 530 | PLN02850, PLN02850, aspartate-tRNA ligase | 5e-13 | |
| TIGR00458 | 428 | TIGR00458, aspS_nondisc, nondiscriminating asparty | 1e-12 | |
| PTZ00401 | 550 | PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Prov | 1e-12 | |
| PTZ00385 | 659 | PTZ00385, PTZ00385, lysyl-tRNA synthetase; Provisi | 3e-12 | |
| cd04323 | 84 | cd04323, AsnRS_cyto_like_N, AsnRS_cyto_like_N: N-t | 1e-11 | |
| PRK00484 | 491 | PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | 3e-11 | |
| TIGR00457 | 453 | TIGR00457, asnS, asparaginyl-tRNA synthetase | 4e-11 | |
| COG1190 | 502 | COG1190, LysU, Lysyl-tRNA synthetase (class II) [T | 4e-11 | |
| cd00775 | 329 | cd00775, LysRS_core, Lys_tRNA synthetase (LysRS) c | 6e-11 | |
| TIGR00499 | 496 | TIGR00499, lysS_bact, lysyl-tRNA synthetase, eukar | 1e-10 | |
| PTZ00401 | 550 | PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Prov | 2e-10 | |
| PRK03932 | 450 | PRK03932, asnC, asparaginyl-tRNA synthetase; Valid | 9e-10 | |
| PRK12445 | 505 | PRK12445, PRK12445, lysyl-tRNA synthetase; Reviewe | 4e-09 | |
| PRK02983 | 1094 | PRK02983, lysS, lysyl-tRNA synthetase; Provisional | 1e-08 | |
| PRK02983 | 1094 | PRK02983, lysS, lysyl-tRNA synthetase; Provisional | 2e-08 | |
| PLN02502 | 553 | PLN02502, PLN02502, lysyl-tRNA synthetase | 3e-08 | |
| COG2269 | 322 | COG2269, COG2269, Truncated, possibly inactive, ly | 3e-08 | |
| cd04322 | 108 | cd04322, LysRS_N, LysRS_N: N-terminal, anticodon r | 6e-08 | |
| TIGR00462 | 290 | TIGR00462, genX, EF-P lysine aminoacylase GenX | 1e-07 | |
| PRK02983 | 1094 | PRK02983, lysS, lysyl-tRNA synthetase; Provisional | 3e-07 | |
| COG2269 | 322 | COG2269, COG2269, Truncated, possibly inactive, ly | 9e-07 | |
| TIGR00462 | 290 | TIGR00462, genX, EF-P lysine aminoacylase GenX | 2e-06 | |
| PLN02603 | 565 | PLN02603, PLN02603, asparaginyl-tRNA synthetase | 2e-06 | |
| PTZ00417 | 585 | PTZ00417, PTZ00417, lysine-tRNA ligase; Provisiona | 4e-06 | |
| cd04319 | 103 | cd04319, PhAsnRS_like_N, PhAsnRS_like_N: N-termina | 5e-06 | |
| pfam00587 | 171 | pfam00587, tRNA-synt_2b, tRNA synthetase class II | 5e-06 | |
| PTZ00417 | 585 | PTZ00417, PTZ00417, lysine-tRNA ligase; Provisiona | 7e-06 | |
| PRK09350 | 306 | PRK09350, PRK09350, poxB regulator PoxA; Provision | 7e-06 | |
| PTZ00385 | 659 | PTZ00385, PTZ00385, lysyl-tRNA synthetase; Provisi | 2e-05 | |
| PTZ00425 | 586 | PTZ00425, PTZ00425, asparagine-tRNA ligase; Provis | 2e-05 | |
| PRK09350 | 306 | PRK09350, PRK09350, poxB regulator PoxA; Provision | 3e-05 | |
| cd04321 | 86 | cd04321, ScAspRS_mt_like_N, ScAspRS_mt_like_N: N-t | 6e-05 | |
| PTZ00425 | 586 | PTZ00425, PTZ00425, asparagine-tRNA ligase; Provis | 7e-05 | |
| cd00768 | 211 | cd00768, class_II_aaRS-like_core, Class II tRNA am | 1e-04 | |
| cd04318 | 82 | cd04318, EcAsnRS_like_N, EcAsnRS_like_N: N-termina | 1e-04 | |
| PLN02532 | 633 | PLN02532, PLN02532, asparagine-tRNA synthetase | 0.001 | |
| PLN02221 | 572 | PLN02221, PLN02221, asparaginyl-tRNA synthetase | 0.002 |
| >gnl|CDD|234775 PRK00476, aspS, aspartyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
Score = 966 bits (2499), Expect = 0.0
Identities = 330/591 (55%), Positives = 437/591 (73%), Gaps = 14/591 (2%)
Query: 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDIKIYKIA 60
MRTHYCG + E + Q ++LCGWVHR+R+HGG+IFIDLRD G+VQ+VFDP D + +++A
Sbjct: 3 MRTHYCGELRESHVGQTVTLCGWVHRRRDHGGLIFIDLRDREGIVQVVFDP-DAEAFEVA 61
Query: 61 KIIRNEFCLQIIGKVCSRPNKTNNTNLISGNIEILCRELKILNSSITLPFQI-DEKNILE 119
+ +R+E+ +Q+ G V +RP T N NL +G IE+L EL++LN S TLPF I DE+++ E
Sbjct: 62 ESLRSEYVIQVTGTVRARPEGTVNPNLPTGEIEVLASELEVLNKSKTLPFPIDDEEDVSE 121
Query: 120 VTNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLV 179
LKYR L LR MQKNL+LR KVT +R FLD F+EIETPIL+KSTPEGARDYLV
Sbjct: 122 ELRLKYRYLDLRRPEMQKNLKLRSKVTSAIRNFLDDNGFLEIETPILTKSTPEGARDYLV 181
Query: 180 PSRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSF 239
PSR++PG+F+ALPQSPQLFKQLLMVA FDRYYQI +CFRDEDLR+DRQPEFTQID E SF
Sbjct: 182 PSRVHPGKFYALPQSPQLFKQLLMVAGFDRYYQIARCFRDEDLRADRQPEFTQIDIEMSF 241
Query: 240 MNEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTN 299
+ +E++ L E +IR +F + L + LP PFP + ++ A++ YGSDKPD+ L D+T+
Sbjct: 242 VTQEDVMALMEGLIRHVFKEVLGVDLPTPFPRMTYAEAMRRYGSDKPDLRFGLELVDVTD 301
Query: 300 IMKDSDFKLFSKIANMKNGRIIGLKIPGG-FSISRNEINYYTQFVKTYGAKGLTYIKIHK 358
+ KDS FK+F+ AN GR+ +++PGG +SR +I+ T+F K YGAKGL YIK+
Sbjct: 302 LFKDSGFKVFAGAAN-DGGRVKAIRVPGGAAQLSRKQIDELTEFAKIYGAKGLAYIKV-- 358
Query: 359 ISKEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYS 418
DGLK PI K+ + L ++ +T A++GD+IF G D+ +VN+ + ALR+K+G
Sbjct: 359 ---NEDGLKGPIAKFLSEEELAALLERTGAKDGDLIFFGADKAKVVNDALGALRLKLGK- 414
Query: 419 DFGKRNNILNNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIIT-NPEKIF 477
+ I +K+ LWV++FPMF+YD+ W+A HHPFT PKD D + T +P K
Sbjct: 415 ---ELGLIDEDKFAFLWVVDFPMFEYDEEEGRWVAAHHPFTMPKDEDLDELETTDPGKAR 471
Query: 478 SKAYDLIINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGG 537
+ AYDL++NG+E+GGGSIRIH EIQ+K+F++L I + + +FGFLL++LKYGAPPHGG
Sbjct: 472 AYAYDLVLNGYELGGGSIRIHRPEIQEKVFEILGISEEEAEEKFGFLLDALKYGAPPHGG 531
Query: 538 IAFGLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNI 588
IAFGLDRL+ ++ G+ SIRDVIAFPKTQSAQ LLT APS VDEKQL EL I
Sbjct: 532 IAFGLDRLVMLLAGADSIRDVIAFPKTQSAQDLLTGAPSPVDEKQLRELGI 582
|
Length = 588 |
| >gnl|CDD|223251 COG0173, AspS, Aspartyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|211576 TIGR00459, aspS_bact, aspartyl-tRNA synthetase, bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|215490 PLN02903, PLN02903, aminoacyl-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|105955 PRK12820, PRK12820, bifunctional aspartyl-tRNA synthetase/aspartyl/glutamyl-tRNA amidotransferase subunit C; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238400 cd00777, AspRS_core, Asp tRNA synthetase (aspRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|215753 pfam00152, tRNA-synt_2, tRNA synthetases class II (D, K and N) | Back alignment and domain information |
|---|
| >gnl|CDD|238400 cd00777, AspRS_core, Asp tRNA synthetase (aspRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|239812 cd04317, EcAspRS_like_N, EcAspRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli aspartyl-tRNA synthetase (AspRS), the human mitochondrial (mt) AspRS-2, the discriminating (D) Thermus thermophilus AspRS-1, and the nondiscriminating (ND) Helicobacter pylori AspRS | Back alignment and domain information |
|---|
| >gnl|CDD|215753 pfam00152, tRNA-synt_2, tRNA synthetases class II (D, K and N) | Back alignment and domain information |
|---|
| >gnl|CDD|235354 PRK05159, aspC, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223096 COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|238358 cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|129550 TIGR00458, aspS_nondisc, nondiscriminating aspartyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238358 cd00669, Asp_Lys_Asn_RS_core, Asp_Lys_Asn_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|239766 cd04100, Asp_Lys_Asn_RS_N, Asp_Lys_Asn_RS_N: N-terminal, anticodon recognition domain of class 2b aminoacyl-tRNA synthetases (aaRSs) | Back alignment and domain information |
|---|
| >gnl|CDD|238399 cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/AsnRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|145868 pfam02938, GAD, GAD domain | Back alignment and domain information |
|---|
| >gnl|CDD|235176 PRK03932, asnC, asparaginyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|232998 TIGR00499, lysS_bact, lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial | Back alignment and domain information |
|---|
| >gnl|CDD|232982 TIGR00457, asnS, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >gnl|CDD|224111 COG1190, LysU, Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|215456 PLN02850, PLN02850, aspartate-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|235354 PRK05159, aspC, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215278 PLN02502, PLN02502, lysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|238399 cd00776, AsxRS_core, Asx tRNA synthetase (AspRS/AsnRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|234778 PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223096 COG0017, AsnS, Aspartyl/asparaginyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|171504 PRK12445, PRK12445, lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|239811 cd04316, ND_PkAspRS_like_N, ND_PkAspRS_like_N: N-terminal, anticodon recognition domain of the type found in the homodimeric non-discriminating (ND) Pyrococcus kodakaraensis aspartyl-tRNA synthetase (AspRS) | Back alignment and domain information |
|---|
| >gnl|CDD|216440 pfam01336, tRNA_anti, OB-fold nucleic acid binding domain | Back alignment and domain information |
|---|
| >gnl|CDD|235808 PRK06462, PRK06462, asparagine synthetase A; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|238398 cd00775, LysRS_core, Lys_tRNA synthetase (LysRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|215456 PLN02850, PLN02850, aspartate-tRNA ligase | Back alignment and domain information |
|---|
| >gnl|CDD|129550 TIGR00458, aspS_nondisc, nondiscriminating aspartyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|173592 PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185588 PTZ00385, PTZ00385, lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239818 cd04323, AsnRS_cyto_like_N, AsnRS_cyto_like_N: N-terminal, anticodon recognition domain of the type found in human and Saccharomyces cerevisiae cytoplasmic asparaginyl-tRNA synthetase (AsnRS), in Brugia malayai AsnRs and, in various putative bacterial AsnRSs | Back alignment and domain information |
|---|
| >gnl|CDD|234778 PRK00484, lysS, lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|232982 TIGR00457, asnS, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|224111 COG1190, LysU, Lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|238398 cd00775, LysRS_core, Lys_tRNA synthetase (LysRS) class II core domain | Back alignment and domain information |
|---|
| >gnl|CDD|232998 TIGR00499, lysS_bact, lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial | Back alignment and domain information |
|---|
| >gnl|CDD|173592 PTZ00401, PTZ00401, aspartyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235176 PRK03932, asnC, asparaginyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|171504 PRK12445, PRK12445, lysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|235095 PRK02983, lysS, lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235095 PRK02983, lysS, lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215278 PLN02502, PLN02502, lysyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|225178 COG2269, COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|239817 cd04322, LysRS_N, LysRS_N: N-terminal, anticodon recognition domain of lysyl-tRNA synthetases (LysRS) | Back alignment and domain information |
|---|
| >gnl|CDD|232984 TIGR00462, genX, EF-P lysine aminoacylase GenX | Back alignment and domain information |
|---|
| >gnl|CDD|235095 PRK02983, lysS, lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|225178 COG2269, COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >gnl|CDD|232984 TIGR00462, genX, EF-P lysine aminoacylase GenX | Back alignment and domain information |
|---|
| >gnl|CDD|178213 PLN02603, PLN02603, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|173607 PTZ00417, PTZ00417, lysine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239814 cd04319, PhAsnRS_like_N, PhAsnRS_like_N: N-terminal, anticodon recognition domain of the type found in Pyrococcus horikoshii AsnRS asparaginyl-tRNA synthetase (AsnRS) | Back alignment and domain information |
|---|
| >gnl|CDD|216009 pfam00587, tRNA-synt_2b, tRNA synthetase class II core domain (G, H, P, S and T) | Back alignment and domain information |
|---|
| >gnl|CDD|173607 PTZ00417, PTZ00417, lysine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236474 PRK09350, PRK09350, poxB regulator PoxA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185588 PTZ00385, PTZ00385, lysyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240414 PTZ00425, PTZ00425, asparagine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236474 PRK09350, PRK09350, poxB regulator PoxA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239816 cd04321, ScAspRS_mt_like_N, ScAspRS_mt_like_N: N-terminal, anticodon recognition domain of the type found in Saccharomyces cerevisiae mitochondrial (mt) aspartyl-tRNA synthetase (AspRS) | Back alignment and domain information |
|---|
| >gnl|CDD|240414 PTZ00425, PTZ00425, asparagine-tRNA ligase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238391 cd00768, class_II_aaRS-like_core, Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
| >gnl|CDD|239813 cd04318, EcAsnRS_like_N, EcAsnRS_like_N: N-terminal, anticodon recognition domain of the type found in Escherichia coli asparaginyl-tRNA synthetase (AsnRS) and, in Arabidopsis thaliana and Saccharomyces cerevisiae mitochondrial (mt) AsnRS | Back alignment and domain information |
|---|
| >gnl|CDD|215291 PLN02532, PLN02532, asparagine-tRNA synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|177867 PLN02221, PLN02221, asparaginyl-tRNA synthetase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 595 | ||||
| 1eqr_A | 590 | Crystal Structure Of Free Aspartyl-Trna Synthetase | 0.0 | ||
| 1c0a_A | 585 | Crystal Structure Of The E. Coli Aspartyl-Trna Synt | 0.0 | ||
| 1efw_A | 580 | Crystal Structure Of Aspartyl-Trna Synthetase From | 1e-137 | ||
| 4ah6_A | 617 | Human Mitochondrial Aspartyl-Trna Synthetase Length | 1e-109 | ||
| 3nel_A | 438 | Aspartyl-Trna Synthetase Complexed With Aspartic Ac | 4e-27 | ||
| 3nel_A | 438 | Aspartyl-Trna Synthetase Complexed With Aspartic Ac | 7e-09 | ||
| 1b8a_A | 438 | Aspartyl-trna Synthetase Length = 438 | 3e-26 | ||
| 1b8a_A | 438 | Aspartyl-trna Synthetase Length = 438 | 6e-09 | ||
| 1wyd_A | 429 | Crystal Structure Of Aspartyl-Trna Synthetase From | 3e-22 | ||
| 1wyd_A | 429 | Crystal Structure Of Aspartyl-Trna Synthetase From | 9e-11 | ||
| 1n9w_A | 422 | Crystal Structure Of The Non-Discriminating And Arc | 2e-18 | ||
| 1n9w_A | 422 | Crystal Structure Of The Non-Discriminating And Arc | 2e-08 | ||
| 1x54_A | 434 | Crystal Structure Of Asparaginyl-trna Synthetase Fr | 5e-15 | ||
| 1bbu_A | 504 | Lysyl-Trna Synthetase (Lyss) Complexed With Lysine | 6e-15 | ||
| 1bbu_A | 504 | Lysyl-Trna Synthetase (Lyss) Complexed With Lysine | 2e-08 | ||
| 4ex5_A | 529 | Crystal Structure Of Lysyl-Trna Synthetase Lysrs Fr | 7e-15 | ||
| 4ex5_A | 529 | Crystal Structure Of Lysyl-Trna Synthetase Lysrs Fr | 5e-10 | ||
| 3m4p_A | 456 | Entamoeba Histolytica Asparaginyl-Trna Synthetase ( | 9e-15 | ||
| 3m4p_A | 456 | Entamoeba Histolytica Asparaginyl-Trna Synthetase ( | 9e-06 | ||
| 1lyl_A | 504 | Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexe | 1e-13 | ||
| 1lyl_A | 504 | Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexe | 3e-09 | ||
| 1eov_A | 487 | Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.1 | 4e-13 | ||
| 1eov_A | 487 | Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.1 | 2e-06 | ||
| 1asy_A | 490 | Class Ii Aminoacyl Transfer Rna Synthetases: Crysta | 4e-13 | ||
| 1asy_A | 490 | Class Ii Aminoacyl Transfer Rna Synthetases: Crysta | 2e-06 | ||
| 4dpg_A | 513 | Crystal Structure Of Human Lysrs: P38/aimp2 Complex | 5e-13 | ||
| 3bju_A | 521 | Crystal Structure Of Tetrameric Form Of Human Lysyl | 5e-13 | ||
| 3e9h_A | 493 | Lysyl-Trna Synthetase From Bacillus Stearothermophi | 6e-09 | ||
| 3e9h_A | 493 | Lysyl-Trna Synthetase From Bacillus Stearothermophi | 1e-07 | ||
| 2xgt_A | 435 | Asparaginyl-Trna Synthetase From Brugia Malayi Comp | 2e-08 | ||
| 3i7f_A | 548 | Aspartyl Trna Synthetase From Entamoeba Histolytica | 2e-08 | ||
| 2xti_A | 437 | Asparaginyl-Trna Synthetase From Brugia Malayi Comp | 3e-08 | ||
| 3a5y_A | 345 | Crystal Structure Of Genx From Escherichia Coli In | 6e-06 | ||
| 3a5y_A | 345 | Crystal Structure Of Genx From Escherichia Coli In | 3e-04 | ||
| 3a5z_A | 328 | Crystal Structure Of Escherichia Coli Genx In Compl | 7e-06 | ||
| 3a5z_A | 328 | Crystal Structure Of Escherichia Coli Genx In Compl | 2e-04 | ||
| 3g1z_A | 326 | Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthe | 1e-05 | ||
| 3g1z_A | 326 | Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthe | 4e-05 |
| >pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From Escherichia Coli Length = 590 | Back alignment and structure |
|
| >pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase : Trnaasp : Aspartyl-Adenylate Complex Length = 585 | Back alignment and structure |
| >pdb|1EFW|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Thermus Thermophilus Complexed To Trnaasp From Escherichia Coli Length = 580 | Back alignment and structure |
| >pdb|4AH6|A Chain A, Human Mitochondrial Aspartyl-Trna Synthetase Length = 617 | Back alignment and structure |
| >pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid Length = 438 | Back alignment and structure |
| >pdb|3NEL|A Chain A, Aspartyl-Trna Synthetase Complexed With Aspartic Acid Length = 438 | Back alignment and structure |
| >pdb|1B8A|A Chain A, Aspartyl-trna Synthetase Length = 438 | Back alignment and structure |
| >pdb|1B8A|A Chain A, Aspartyl-trna Synthetase Length = 438 | Back alignment and structure |
| >pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Sulfolobus Tokodaii Length = 429 | Back alignment and structure |
| >pdb|1WYD|A Chain A, Crystal Structure Of Aspartyl-Trna Synthetase From Sulfolobus Tokodaii Length = 429 | Back alignment and structure |
| >pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus Length = 422 | Back alignment and structure |
| >pdb|1N9W|A Chain A, Crystal Structure Of The Non-Discriminating And Archaeal- Type Aspartyl-Trna Synthetase From Thermus Thermophilus Length = 422 | Back alignment and structure |
| >pdb|1X54|A Chain A, Crystal Structure Of Asparaginyl-trna Synthetase From Pyrococcus Horikoshii Complexed With Asparaginyl-adenylate Length = 434 | Back alignment and structure |
| >pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine Length = 504 | Back alignment and structure |
| >pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine Length = 504 | Back alignment and structure |
| >pdb|4EX5|A Chain A, Crystal Structure Of Lysyl-Trna Synthetase Lysrs From Burkholderia Thailandensis Bound To Lysine Length = 529 | Back alignment and structure |
| >pdb|4EX5|A Chain A, Crystal Structure Of Lysyl-Trna Synthetase Lysrs From Burkholderia Thailandensis Bound To Lysine Length = 529 | Back alignment and structure |
| >pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs) In Complex With Asparaginyl-Adenylate Length = 456 | Back alignment and structure |
| >pdb|3M4P|A Chain A, Entamoeba Histolytica Asparaginyl-Trna Synthetase (Asnrs) In Complex With Asparaginyl-Adenylate Length = 456 | Back alignment and structure |
| >pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With Lysine Length = 504 | Back alignment and structure |
| >pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With Lysine Length = 504 | Back alignment and structure |
| >pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From Yeast Length = 487 | Back alignment and structure |
| >pdb|1EOV|A Chain A, Free Aspartyl-Trna Synthetase (Asprs) (E.C. 6.1.1.12) From Yeast Length = 487 | Back alignment and structure |
| >pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal Structure Of Yeast Aspartyl-Trna Synthetase Complexed With Trna Asp Length = 490 | Back alignment and structure |
| >pdb|1ASY|A Chain A, Class Ii Aminoacyl Transfer Rna Synthetases: Crystal Structure Of Yeast Aspartyl-Trna Synthetase Complexed With Trna Asp Length = 490 | Back alignment and structure |
| >pdb|4DPG|A Chain A, Crystal Structure Of Human Lysrs: P38/aimp2 Complex I Length = 513 | Back alignment and structure |
| >pdb|3BJU|A Chain A, Crystal Structure Of Tetrameric Form Of Human Lysyl-Trna Synthetase Length = 521 | Back alignment and structure |
| >pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus Complexed With L-Lysylsulfamoyl Adenosine Length = 493 | Back alignment and structure |
| >pdb|3E9H|A Chain A, Lysyl-Trna Synthetase From Bacillus Stearothermophilus Complexed With L-Lysylsulfamoyl Adenosine Length = 493 | Back alignment and structure |
| >pdb|2XGT|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed With The Sulphamoyl Analogue Of Asparaginyl-Adenylate Length = 435 | Back alignment and structure |
| >pdb|3I7F|A Chain A, Aspartyl Trna Synthetase From Entamoeba Histolytica Length = 548 | Back alignment and structure |
| >pdb|2XTI|A Chain A, Asparaginyl-Trna Synthetase From Brugia Malayi Complexed With Atp:mg And L-Asp-Beta-Noh Adenylate:ppi:mg Length = 437 | Back alignment and structure |
| >pdb|3A5Y|A Chain A, Crystal Structure Of Genx From Escherichia Coli In Complex With Lysyladenylate Analog Length = 345 | Back alignment and structure |
| >pdb|3A5Y|A Chain A, Crystal Structure Of Genx From Escherichia Coli In Complex With Lysyladenylate Analog Length = 345 | Back alignment and structure |
| >pdb|3A5Z|A Chain A, Crystal Structure Of Escherichia Coli Genx In Complex With Elongation Factor P Length = 328 | Back alignment and structure |
| >pdb|3A5Z|A Chain A, Crystal Structure Of Escherichia Coli Genx In Complex With Elongation Factor P Length = 328 | Back alignment and structure |
| >pdb|3G1Z|A Chain A, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase From Salmonella Typhimurium Length = 326 | Back alignment and structure |
| >pdb|3G1Z|A Chain A, Structure Of Idp01693YJEA, A POTENTIAL T-Rna Synthetase From Salmonella Typhimurium Length = 326 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* Length = 585 | Back alignment and structure |
|---|
Score = 979 bits (2533), Expect = 0.0
Identities = 289/589 (49%), Positives = 410/589 (69%), Gaps = 9/589 (1%)
Query: 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDIKIYKIA 60
MRT YCG + + Q ++LCGWV+R+R+ G +IFID+RD G+VQ+ FDP+ K+A
Sbjct: 1 MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLA 60
Query: 61 KIIRNEFCLQIIGKVCSRPNKTNNTNLISGNIEILCRELKILNSSITLPFQIDEKNILEV 120
+RNEFC+Q+ G V +R K N ++ +G IE+L L I+N + LP + E
Sbjct: 61 SELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTIINRADVLPLDSNH-VNTEE 119
Query: 121 TNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLVP 180
LKYR L LR M + L+ R K+T VR+F+D F++IETP+L+K+TPEGARDYLVP
Sbjct: 120 ARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVP 179
Query: 181 SRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSFM 240
SR++ G+F+ALPQSPQLFKQLLM++ FDRYYQI KCFRDEDLR+DRQPEFTQID ETSFM
Sbjct: 180 SRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFM 239
Query: 241 NEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTNI 300
++R + E ++R ++ + + L FPV+ ++ A + YGSDKPD+ + TD+ ++
Sbjct: 240 TAPQVREVMEALVRHLWLEVKGVDLG-DFPVMTFAEAERRYGSDKPDLRNPMELTDVADL 298
Query: 301 MKDSDFKLFSKIANMKNGRIIGLKIPGGFSISRNEINYYTQFVKTYGAKGLTYIKIHKIS 360
+K +F +F+ AN GR+ L++PGG S++R +I+ Y FVK YGAKGL YIK+++ +
Sbjct: 299 LKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQIDEYGNFVKIYGAKGLAYIKVNERA 358
Query: 361 KEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYSDF 420
K +G+ SP+ K+ N I+E I+++T AQ+GD+IF G D K IV + M ALR+K+
Sbjct: 359 KGLEGINSPVAKFLNAEIIEDILDRTAAQDGDMIFFGADNKKIVADAMGALRLKV----- 413
Query: 421 GKRNNILN-NKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSK 479
GK + + +KW PLWVI+FPMF+ D A HHPFT+PKD + PE +
Sbjct: 414 GKDLGLTDESKWAPLWVIDFPMFEDDG-EGGLTAMHHPFTSPKDMTAAELKAAPENAVAN 472
Query: 480 AYDLIINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIA 539
AYD++ING+E+GGGS+RIH+ ++Q+ +F +L I+ + + +FGFLL++LKYG PPH G+A
Sbjct: 473 AYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEEEQREKFGFLLDALKYGTPPHAGLA 532
Query: 540 FGLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNI 588
FGLDRL ++TG+ +IRDVIAFPKT +A CL+T APS + L EL+I
Sbjct: 533 FGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELSI 581
|
| >1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A Length = 580 | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Length = 429 | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} Length = 429 | Back alignment and structure |
|---|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Length = 438 | Back alignment and structure |
|---|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* Length = 438 | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Length = 487 | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* Length = 487 | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Length = 434 | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A Length = 434 | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Length = 422 | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* Length = 422 | Back alignment and structure |
|---|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Length = 456 | Back alignment and structure |
|---|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A Length = 456 | Back alignment and structure |
|---|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Length = 435 | Back alignment and structure |
|---|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* Length = 435 | Back alignment and structure |
|---|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Length = 548 | Back alignment and structure |
|---|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} Length = 548 | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Length = 294 | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* Length = 294 | Back alignment and structure |
|---|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} Length = 521 | Back alignment and structure |
|---|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} Length = 521 | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Length = 493 | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* Length = 493 | Back alignment and structure |
|---|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} Length = 529 | Back alignment and structure |
|---|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} Length = 529 | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A Length = 504 | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A Length = 504 | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* Length = 345 | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* Length = 345 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* Length = 290 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| 4ah6_A | 617 | Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo | 100.0 | |
| 1c0a_A | 585 | Aspartyl tRNA synthetase; protein-RNA complex, lig | 100.0 | |
| 1l0w_A | 580 | Aspartyl-tRNA synthetase; space-grown crystal, dim | 100.0 | |
| 3nem_A | 438 | Aspartyl-tRNA synthetase; rossmann fold, OB fold, | 100.0 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 100.0 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 100.0 | |
| 4ex5_A | 529 | Lysine--tRNA ligase; structural genomics, niaid, n | 100.0 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 100.0 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 100.0 | |
| 3i7f_A | 548 | Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi | 100.0 | |
| 2xgt_A | 435 | Asparaginyl-tRNA synthetase, cytoplasmic; ligase, | 100.0 | |
| 3bju_A | 521 | Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 100.0 | |
| 3m4p_A | 456 | Ehasnrs, asparaginyl-tRNA synthetase, putative; am | 100.0 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 100.0 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 100.0 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 100.0 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 99.9 | |
| 12as_A | 330 | Asparagine synthetase; ligase, nitrogen fixation; | 99.84 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 99.74 | |
| 1b7y_A | 350 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 99.72 | |
| 3pco_A | 327 | Phenylalanyl-tRNA synthetase, alpha subunit; amino | 99.58 | |
| 2rhq_A | 294 | Phenylalanyl-tRNA synthetase alpha chain; heterote | 99.57 | |
| 3l4g_A | 508 | Phenylalanyl-tRNA synthetase alpha chain; aminoacy | 99.4 | |
| 3cmq_A | 415 | Phenylalanyl-tRNA synthetase, mitochondrial; class | 99.12 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 98.97 | |
| 2du3_A | 534 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 98.75 | |
| 2du7_A | 549 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 98.74 | |
| 2odr_B | 648 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 98.68 | |
| 2odr_A | 665 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 98.68 | |
| 2odr_D | 685 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 98.68 | |
| 2odr_C | 701 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 98.64 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 98.38 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 98.36 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 98.35 | |
| 2dq3_A | 425 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 98.32 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 98.32 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 98.31 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 98.29 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 98.28 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 98.26 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 98.25 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 98.22 | |
| 4g84_A | 464 | Histidine--tRNA ligase, cytoplasmic; synthetase; 2 | 98.19 | |
| 4g85_A | 517 | Histidine-tRNA ligase, cytoplasmic; synthetase; 3. | 98.19 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 98.16 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 98.14 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 98.09 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 98.07 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 98.05 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 98.05 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 98.04 | |
| 1ses_A | 421 | Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A | 98.03 | |
| 3a32_A | 471 | Probable threonyl-tRNA synthetase 1; aeropyrum per | 97.95 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 97.94 | |
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 97.9 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 97.9 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 97.79 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 97.73 | |
| 2rhq_B | 795 | Phenylalanyl-tRNA synthetase beta chain; heterotet | 97.71 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 97.71 | |
| 1wle_A | 501 | Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo | 97.64 | |
| 3lss_A | 484 | Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, | 97.58 | |
| 3vbb_A | 522 | Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l | 97.58 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 97.56 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 97.5 | |
| 3qne_A | 485 | Seryl-tRNA synthetase, cytoplasmic; amino acid bio | 97.44 | |
| 3kf6_A | 159 | Protein STN1; OB fold, chromosomal protein, DNA-bi | 96.97 | |
| 2zt5_A | 693 | Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP | 96.95 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 96.95 | |
| 3kdf_D | 132 | Replication protein A 32 kDa subunit; wheat GERM c | 96.91 | |
| 3dm3_A | 105 | Replication factor A; probably plays AN essential | 96.7 | |
| 2k50_A | 115 | Replication factor A related protein; uncharacteri | 96.59 | |
| 4gop_B | 136 | Putative uncharacterized protein; OB fold, ssDNA b | 96.53 | |
| 1nnx_A | 109 | Protein YGIW; structural genomics, hypothetical pr | 96.52 | |
| 3e0e_A | 97 | Replication protein A; structural genomics, PSI-2, | 96.49 | |
| 3ikl_A | 459 | DNA polymerase subunit gamma-2, mitochondrial; tra | 96.3 | |
| 1ynx_A | 114 | Replication factor-A protein 1; canonical OB fold, | 96.28 | |
| 3au7_A | 402 | TIAS, putative uncharacterized protein; ATP hydrol | 95.82 | |
| 1g5h_A | 454 | Mitochondrial DNA polymerase accessory subunit; in | 95.78 | |
| 2pi2_A | 270 | Replication protein A 32 kDa subunit; FULL-length | 95.53 | |
| 3l4g_B | 589 | Phenylalanyl-tRNA synthetase beta chain; aminoacyl | 95.4 | |
| 3ig2_A | 213 | Phenylalanyl-tRNA synthetase beta chain; phers, MC | 94.87 | |
| 3ica_A | 213 | Phenylalanyl-tRNA synthetase beta chain; APC61692. | 94.59 | |
| 1o7i_A | 119 | SSB, SSO2364, single stranded DNA binding protein; | 93.82 | |
| 3kdf_A | 121 | Replication protein A 14 kDa subunit; wheat GERM c | 93.56 | |
| 3kf8_A | 220 | Protein STN1; OB fold; 2.40A {Candida tropicalis m | 93.33 | |
| 1jmc_A | 246 | Protein (replication protein A (RPA)); human ssDNA | 93.29 | |
| 4gop_C | 444 | Putative uncharacterized protein; OB fold, ssDNA b | 92.25 | |
| 1b7y_B | 785 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 92.1 | |
| 2kbn_A | 109 | Conserved protein; nucleic acid binding protein, b | 90.66 | |
| 2hpi_A | 1220 | DNA polymerase III alpha subunit; POL-beta-like nu | 90.08 | |
| 2pi2_E | 142 | Replication protein A 14 kDa subunit; FULL-length | 89.25 | |
| 2k75_A | 106 | Uncharacterized protein TA0387; closed beta barrel | 88.96 | |
| 4gop_A | 114 | Putative uncharacterized protein; OB fold, ssDNA b | 86.48 | |
| 3fhw_A | 115 | Primosomal replication protein N; PRIB BPR162 X-RA | 85.97 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 82.52 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 80.75 |
| >4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-135 Score=1130.32 Aligned_cols=573 Identities=38% Similarity=0.685 Sum_probs=524.4
Q ss_pred CccccccccccccCCCEEEEEEEEEeEeccCCeEEEEEEeCCeeEEEEECCCcH--HHHHHHhcCCCCcEEEEEeEEEeC
Q psy13353 1 MRTHYCGNITEKLLDQVISLCGWVHRKRNHGGIIFIDLRDYTGLVQIVFDPNDI--KIYKIAKIIRNEFCLQIIGKVCSR 78 (595)
Q Consensus 1 ~~t~~~~~l~~~~~g~~V~i~GwV~~~R~~g~l~Fi~LrD~~g~lQvv~~~~~~--~~~~~~~~l~~es~V~V~G~v~~~ 78 (595)
+|||+|++|+.+++|++|+|+|||+++|.+ +|++|||++|.+|||++++.. ++++.++.|+.||+|.|+|+|+.+
T Consensus 10 ~rt~~~~~l~~~~~g~~V~l~GwV~~~R~~---~Fi~LrD~~g~iQvv~~~~~~~~~~~~~~~~l~~e~~V~V~G~v~~~ 86 (617)
T 4ah6_A 10 VRTNTCGELRSSHLGQEVTLCGWIQYRRQN---TFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSGTVISR 86 (617)
T ss_dssp SCSSCGGGCCGGGTTCEEEEEEEECCCCTT---TEEEEECSSCEEEEECCCSSSSHHHHHHHHHCCSSCEEEEEEEEEEC
T ss_pred cCceEHHHhHHHhCCCEEEEEEEeeeecCe---EEEEEEeCCcCEEEEEeCCcCcHHHHHHHhcCCCCCEEEEEEEEEeC
Confidence 589999999999999999999999999975 599999999999999987642 678889999999999999999999
Q ss_pred CCCCCCCCcCCccEEEEEeeEEEeecCCCCCCccccc-CcchhhhccccchhhccHhhHHHHHHHHHHHHHHHHHhh-hC
Q psy13353 79 PNKTNNTNLISGNIEILCRELKILNSSITLPFQIDEK-NILEVTNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLD-SK 156 (595)
Q Consensus 79 ~~~~~~~~~~~g~iEl~v~~i~vls~~~~lP~~~~~~-~~~~~~r~~~r~l~lr~~~~~~~l~~rs~i~~~iR~ff~-~~ 156 (595)
|++..|+++++|++||+|++|+|||+|.++|+++++. ..++++|++|||||+|++.++++|++||.+++++|+||. ++
T Consensus 87 ~~~~~n~~~~tgeiEl~~~~i~vL~~a~~lP~~~~~~~~~~ee~Rl~~R~LdLR~~~~~~~lr~Rs~i~~~iR~f~~~~~ 166 (617)
T 4ah6_A 87 PAGQENPKMPTGEIEIKVKTAELLNACKKLPFEIKNFVKKTEALRLQYRYLDLRSFQMQYNLRLRSQMVMKMREYLCNLH 166 (617)
T ss_dssp STTCCCTTSTTTTEEEEEEEEEEEECBCCCSSCTTTTCCSCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CccccCccCCCCcEEEEEeEEEEeecCCCCCcccccccccChhhhccceeeeecchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9888888899999999999999999998888887653 457899999999999999999999999999999999996 79
Q ss_pred CCeeccCceeecCCCCCCccccccccCCCCCeeeccCChHHHHHHHHhhCCCceEEEecceecCCCCCCCCccccccccc
Q psy13353 157 KFIEIETPILSKSTPEGARDYLVPSRINPGEFFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCE 236 (595)
Q Consensus 157 gF~EV~TPiL~~~~~~ga~~f~~~~~~~~~~~~~L~~Spql~~q~ll~~g~~rvf~i~~~FR~E~~~~~r~~EFt~lE~e 236 (595)
||+||+||+|++++|+||++|.++++ ..+.+|||+||||+|||+||++|++||||||||||+|+++++|+|||||||||
T Consensus 167 gF~EVeTPiL~~st~~GA~~F~v~~~-~~g~~~~L~qSpql~kq~l~v~g~~rvfqi~~~FR~E~~~t~r~pEFt~lE~e 245 (617)
T 4ah6_A 167 GFVDIETPTLFKRTPGGAKEFLVPSR-EPGKFYSLPQSPQQFKQLLMVGGLDRYFQVARCYRDEGSRPDRQPEFTQIDIE 245 (617)
T ss_dssp CCEECCCCSSBCCCCSSSCCCEEECS-STTCEEECCSSTTHHHHHHHHTSCSEEEEEEEEECCCSSCSSSCSEEEEEEEE
T ss_pred CeEEEeCCeeccCCCCCCcCceeccc-cCCcccccccCHHHHHHHHHhcccCcEEEEEhheecccCCCCcCcceecceee
Confidence 99999999999999999999988865 56789999999999999999999999999999999999999999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccHHHHHHHhCCCCCccccchhhcchhhhhhccchhhHHHHhhcc
Q psy13353 237 TSFMNEEEIRNLFEEMIRVIFYKTLNIKLPNPFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTNIMKDSDFKLFSKIANMK 316 (595)
Q Consensus 237 ~~~~~~~dl~~~~E~ll~~l~~~~~~~~~~~~f~rity~ea~~~~~~d~p~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (595)
|+|++++|+|+++|+|++++++.+.+ ++..||+||||.|||.+||+||||+|++++++|+++++++++|.+|+..++.+
T Consensus 246 ~af~d~~d~m~~~E~l~~~~~~~~~~-~~~~pf~r~ty~eA~~~ygsDkPDlR~~~ei~DVtdif~~s~FkVF~~~~~~~ 324 (617)
T 4ah6_A 246 MSFVDQTGIQSLIEGLLQYSWPNDKD-PVVVPFPTMTFAEVLATYGTDKPDTRFGMKIIDISDVFRNTEIGFLQDALSKP 324 (617)
T ss_dssp EESCCHHHHHHHHHHHHHHHSCSSSC-CCCSSCCEEEHHHHHHHTSSSSCCSSSCCCEEECGGGGSSCCCHHHHHHTTST
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHhcC-ccCCCceEeEHHHHHHHHcCCCCccccCcccccHHHHhccCCchhHhhhhhcC
Confidence 99999999999999999999876543 56679999999999999999999999999999999999999999999888767
Q ss_pred CCeeEEEecCCCC-ccchhhhHHHHHHHHH-hCCCCceEEEEeccccccCCCCcccccccCHHHHHHHHHHhcCcCCCeE
Q psy13353 317 NGRIIGLKIPGGF-SISRNEINYYTQFVKT-YGAKGLTYIKIHKISKEFDGLKSPIIKYFNNLILEKIINKTEAQNGDII 394 (595)
Q Consensus 317 ~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~gd~~ 394 (595)
+++|++|++|+++ .++|+.++.+.++++. +|..++.++...+ .++++++.+++++++.++|.+.+++++||++
T Consensus 325 ~g~VkAI~vpg~a~~lsRK~id~L~e~ak~~~g~ggl~~~~~~d-----~~~~~~I~Kflsee~~~~L~e~l~a~~GDlI 399 (617)
T 4ah6_A 325 HGTVKAICIPEGAKYLKRKDIESIRNFAADHFNQEILPVFLNAN-----RNWNSPVANFIMESQRLELIRLMETQEEDVV 399 (617)
T ss_dssp TEEEEEEEEESCTTTSCTTTHHHHHHHHHHSSCCCEEEECSSTT-----TTSSCTTHHHHHHHHHHHHHHHHTCCSSEEE
T ss_pred CCeEEEEEcCCCccccchhhHHHHHHHHHHhcCCceEEEEEecC-----CccccchhhhcCHHHHHHHHHHhCCCCCCEE
Confidence 8999999999876 4799999999999999 7766655554433 3588999999999999999999999999999
Q ss_pred EecCCchhhHHHHHHHHHHHhcccCccccc-----ccc-cCCCccEEEEecCCCcc-ccccccccccccCCCCCCC-CCC
Q psy13353 395 FLGGDEKNIVNNFMSALRIKIGYSDFGKRN-----NIL-NNKWHPLWVINFPMFKY-DKINNNWIARHHPFTAPKD-GYE 466 (595)
Q Consensus 395 ~~~~~~~~~~~~~lg~~r~~l~~~~~~~~~-----~l~-~~~~~p~~V~dfP~~~~-~~~~~~~~a~~~PF~~~~~-~~~ 466 (595)
||++++...++++||++|..+++ ++ +++ ++.++|+||+|||+|++ ++++++|.|+|||||||+. |.+
T Consensus 400 ff~Ag~~~~v~~~LG~LR~~l~~-----~L~~~~~~l~~~~~~~f~WvvdfPlf~~~~~~~~~~~a~HhPFT~P~~~d~~ 474 (617)
T 4ah6_A 400 LLTAGEHNKACSLLGKLRLECAD-----LLETRGVVLRDPTLFSFLWVVDFPLFLPKEENPRELESAHHPFTAPHPSDIH 474 (617)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHH-----HHHTTSCCSCCTTSCCEEEEECCBSBCCCSSSSSSCCBSSCSSCCCCCTTST
T ss_pred EEecCChHHHHHHHHHHHHHHHH-----HhhhccccccCCCCeEEEEEeccCCcCCccccccceeeccCCcCCCChhhHH
Confidence 99999988999999999999998 55 366 56789999999999955 4577999999999999998 888
Q ss_pred cccccCccccccceeeEEecCEEEeecccccCCHHHHHHHHH-HcCCChhhhhhcHHHHHHHhhCCCCCccceeccHHHH
Q psy13353 467 DFIITNPEKIFSKAYDLIINGWEIGGGSIRIHDAEIQKKIFK-VLNIDNKIVKTQFGFLLNSLKYGAPPHGGIAFGLDRL 545 (595)
Q Consensus 467 ~l~~~dp~~~~~~~fDl~~~G~Ei~gGs~R~~d~~~~~~~~~-~~g~~~~~~~~~~~~yL~al~~G~PPh~G~glGlDRL 545 (595)
.|. +||.+.++.+||||+||+||+|||+|+||+++|+++|+ .+|++.+ .|+|||+||+||+|||||||+|||||
T Consensus 475 ~l~-~~p~~~~a~~ydlv~~g~El~~gs~ri~~~~~q~~~f~~~~~~~~~----~~~~~l~a~~~G~pphgG~a~G~dRl 549 (617)
T 4ah6_A 475 LLY-TEPKKARSQHYDLVLNGNEIGGGSIRIHNAELQRYILATLLKEDVK----MLSHLLQALDYGAPPHGGIALGLDRL 549 (617)
T ss_dssp HHH-HSTTSSBCCCEEEEETTEEEEEEECCCCSHHHHHHHHHHHCSSTHH----HHHHHHHHHTBTCCCEEEEEEEHHHH
T ss_pred Hhh-cChhhhhhceEEEEECCEEEeeeeEEcCCHHHHHHHHHHhhccchh----hHHHHHHHHHcCCCCCCceeecHHHH
Confidence 887 89999999999999999999999999999999999999 8888753 69999999999999999999999999
Q ss_pred HHHHcCCCCccccccCCCCCCccccCCCCCCcCChhhhhhcccccccc
Q psy13353 546 ITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNILYKKT 593 (595)
Q Consensus 546 vm~l~g~~~IRdvi~FPr~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~ 593 (595)
||+++|.+||||||+|||+.+|+|||++||+.|+++||+||||+++.+
T Consensus 550 vml~~g~~~irdvi~fP~~~~~~d~~~~aP~~v~~~qL~el~i~~~~~ 597 (617)
T 4ah6_A 550 ICLVTGSPSIRDVIAFPKSFRGHDLMSNTPDSVPPEELKPYHIRVSKP 597 (617)
T ss_dssp HHHHHTCSSGGGSSSSCCCSSSCCSSSCCSBCCCGGGTTTTC------
T ss_pred HHHHcCCCchheEEecCCCCCccccccCCCCCCCHHHHHhcCeeeccc
Confidence 999999999999999999999999999999999999999999998753
|
| >1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* | Back alignment and structure |
|---|
| >1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A | Back alignment and structure |
|---|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* | Back alignment and structure |
|---|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* | Back alignment and structure |
|---|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A | Back alignment and structure |
|---|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
| >12as_A Asparagine synthetase; ligase, nitrogen fixation; HET: AMP; 2.20A {Escherichia coli K12} SCOP: d.104.1.1 PDB: 11as_A* | Back alignment and structure |
|---|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
| >1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* | Back alignment and structure |
|---|
| >3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
| >2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* | Back alignment and structure |
|---|
| >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A | Back alignment and structure |
|---|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
| >2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* | Back alignment and structure |
|---|
| >2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
| >2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
| >4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
| >1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A | Back alignment and structure |
|---|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A | Back alignment and structure |
|---|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* | Back alignment and structure |
|---|
| >2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* | Back alignment and structure |
|---|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} | Back alignment and structure |
|---|
| >3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* | Back alignment and structure |
|---|
| >3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
| >3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A | Back alignment and structure |
|---|
| >3kf6_A Protein STN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A | Back alignment and structure |
|---|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
| >3kdf_D Replication protein A 32 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_A 1quq_A 1l1o_B | Back alignment and structure |
|---|
| >3dm3_A Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >2k50_A Replication factor A related protein; uncharacterized protein, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str} | Back alignment and structure |
|---|
| >4gop_B Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis} | Back alignment and structure |
|---|
| >1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1 | Back alignment and structure |
|---|
| >3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A | Back alignment and structure |
|---|
| >3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >1ynx_A Replication factor-A protein 1; canonical OB fold, DNA binding protein; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3au7_A TIAS, putative uncharacterized protein; ATP hydrolysis, RNA binding protein; 2.60A {Archaeoglobus fulgidus} PDB: 3amt_A* 3amu_A* | Back alignment and structure |
|---|
| >1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* | Back alignment and structure |
|---|
| >2pi2_A Replication protein A 32 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2z6k_A 1dpu_A 1z1d_A | Back alignment and structure |
|---|
| >3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
| >1o7i_A SSB, SSO2364, single stranded DNA binding protein; OB fold; 1.2A {Sulfolobus solfataricus} SCOP: b.40.4.3 | Back alignment and structure |
|---|
| >3kdf_A Replication protein A 14 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 1quq_B 1l1o_A | Back alignment and structure |
|---|
| >3kf8_A Protein STN1; OB fold; 2.40A {Candida tropicalis mya-3404} | Back alignment and structure |
|---|
| >1jmc_A Protein (replication protein A (RPA)); human ssDNA binding replication protein A(RPA), single stranded DNA-binding protein, protein-ssDNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: b.40.4.3 b.40.4.3 PDB: 1fgu_A | Back alignment and structure |
|---|
| >4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis} | Back alignment and structure |
|---|
| >1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* | Back alignment and structure |
|---|
| >2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A | Back alignment and structure |
|---|
| >2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A* | Back alignment and structure |
|---|
| >2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C | Back alignment and structure |
|---|
| >2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum} | Back alignment and structure |
|---|
| >4gop_A Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis} | Back alignment and structure |
|---|
| >3fhw_A Primosomal replication protein N; PRIB BPR162 X-RAY NESG, structural genomics, PSI-2, protein initiative; 1.90A {Bordetella parapertussis} PDB: 3dm4_A 3klw_A | Back alignment and structure |
|---|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 595 | ||||
| d1l0wa3 | 356 | d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synt | 2e-52 | |
| d1l0wa3 | 356 | d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synt | 2e-41 | |
| d1c0aa3 | 346 | d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synt | 4e-49 | |
| d1c0aa3 | 346 | d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synt | 2e-45 | |
| d1c0aa1 | 106 | b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS | 1e-32 | |
| d1c0aa2 | 133 | d.74.4.1 (A:288-420) Prokaryotic AspRS, insert dom | 3e-31 | |
| d1nnha_ | 293 | d.104.1.1 (A:) Hypothetical protein PF1951 {Archae | 4e-31 | |
| d1nnha_ | 293 | d.104.1.1 (A:) Hypothetical protein PF1951 {Archae | 2e-25 | |
| d1n9wa2 | 304 | d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (As | 3e-30 | |
| d1n9wa2 | 304 | d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (As | 4e-30 | |
| d1e1oa2 | 342 | d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS | 5e-29 | |
| d1e1oa2 | 342 | d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS | 1e-28 | |
| d1b8aa2 | 335 | d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (As | 6e-29 | |
| d1b8aa2 | 335 | d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (As | 1e-27 | |
| d1l0wa1 | 104 | b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS | 7e-29 | |
| d1eova2 | 353 | d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (As | 3e-28 | |
| d1eova2 | 353 | d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (As | 5e-27 | |
| d1b8aa1 | 103 | b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS | 3e-26 | |
| d1zq1c2 | 131 | d.74.4.1 (C:277-407) Glutamyl-tRNA(gln) amidotrans | 2e-25 | |
| d1l0wa2 | 120 | d.74.4.1 (A:295-414) Prokaryotic AspRS, insert dom | 3e-22 | |
| d1eova1 | 134 | b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspR | 4e-21 | |
| d1n9wa1 | 93 | b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) | 3e-20 | |
| d2d6fc2 | 125 | d.74.4.1 (C:271-395) Glutamyl-tRNA(gln) amidotrans | 1e-19 | |
| d1e1oa1 | 143 | b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) | 6e-07 |
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Score = 181 bits (460), Expect = 2e-52
Identities = 78/169 (46%), Positives = 116/169 (68%)
Query: 424 NNILNNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSKAYDL 483
++ + LWV++FP+ ++D+ W HHPFT+P + +P ++ + AYDL
Sbjct: 187 PDLRREGFRFLWVVDFPLLEWDEEEEAWTYMHHPFTSPHPEDLPLLEKDPGRVRALAYDL 246
Query: 484 IINGWEIGGGSIRIHDAEIQKKIFKVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIAFGLD 543
++NG E+GGGSIRIHD +Q ++F++L I + + +FGF L +L+YGAPPHGGIA+GLD
Sbjct: 247 VLNGVEVGGGSIRIHDPRLQARVFRLLGIGEEEQREKFGFFLEALEYGAPPHGGIAWGLD 306
Query: 544 RLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELNILYKK 592
RL+ +MTGS SIR+VIAFPK + + LT APS V E+QL EL ++ +
Sbjct: 307 RLLALMTGSPSIREVIAFPKNKEGKDPLTGAPSPVPEEQLRELGLMVVR 355
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Length = 356 | Back information, alignment and structure |
|---|
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Length = 346 | Back information, alignment and structure |
|---|
| >d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Length = 106 | Back information, alignment and structure |
|---|
| >d1c0aa2 d.74.4.1 (A:288-420) Prokaryotic AspRS, insert domain {Escherichia coli [TaxId: 562]} Length = 133 | Back information, alignment and structure |
|---|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 293 | Back information, alignment and structure |
|---|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 293 | Back information, alignment and structure |
|---|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Length = 304 | Back information, alignment and structure |
|---|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Length = 304 | Back information, alignment and structure |
|---|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Length = 335 | Back information, alignment and structure |
|---|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Length = 335 | Back information, alignment and structure |
|---|
| >d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} Length = 104 | Back information, alignment and structure |
|---|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 353 | Back information, alignment and structure |
|---|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 353 | Back information, alignment and structure |
|---|
| >d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} Length = 103 | Back information, alignment and structure |
|---|
| >d1zq1c2 d.74.4.1 (C:277-407) Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain {Pyrococcus abyssi [TaxId: 29292]} Length = 131 | Back information, alignment and structure |
|---|
| >d1l0wa2 d.74.4.1 (A:295-414) Prokaryotic AspRS, insert domain {Thermus thermophilus, AspRS-1 [TaxId: 274]} Length = 120 | Back information, alignment and structure |
|---|
| >d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 134 | Back information, alignment and structure |
|---|
| >d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} Length = 93 | Back information, alignment and structure |
|---|
| >d2d6fc2 d.74.4.1 (C:271-395) Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain {Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 125 | Back information, alignment and structure |
|---|
| >d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 595 | |||
| d1c0aa3 | 346 | Aspartyl-tRNA synthetase (AspRS) {Escherichia coli | 100.0 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1e1oa2 | 342 | Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g | 100.0 | |
| d1eova2 | 353 | Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S | 100.0 | |
| d1b8aa2 | 335 | Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ | 100.0 | |
| d1nnha_ | 293 | Hypothetical protein PF1951 {Archaeon Pyrococcus f | 100.0 | |
| d1n9wa2 | 304 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 100.0 | |
| d1c0aa1 | 106 | Aspartyl-tRNA synthetase (AspRS) {Escherichia coli | 99.95 | |
| d1l0wa1 | 104 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 99.92 | |
| d1b8aa1 | 103 | Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ | 99.92 | |
| d1n9wa1 | 93 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 99.85 | |
| d1eova1 | 134 | Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S | 99.79 | |
| d1jjca_ | 266 | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS | 99.75 | |
| d1e1oa1 | 143 | Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g | 99.74 | |
| d1c0aa2 | 133 | Prokaryotic AspRS, insert domain {Escherichia coli | 99.71 | |
| d1l0wa2 | 120 | Prokaryotic AspRS, insert domain {Thermus thermoph | 99.58 | |
| d1zq1c2 | 131 | Glutamyl-tRNA(gln) amidotransferase subunit E, Gat | 99.2 | |
| d2d6fc2 | 125 | Glutamyl-tRNA(gln) amidotransferase subunit E, Gat | 99.16 | |
| d1z7ma1 | 318 | ATP phosphoribosyltransferase regulatory subunit H | 99.06 | |
| d12asa_ | 327 | Asparagine synthetase {Escherichia coli [TaxId: 56 | 98.21 | |
| d1nyra4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a | 98.16 | |
| d1wu7a2 | 327 | Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop | 98.09 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 98.06 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 97.97 | |
| d1h4vb2 | 324 | Histidyl-tRNA synthetase (HisRS) {Thermus thermoph | 97.92 | |
| d1qf6a4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Escherichia coli | 97.82 | |
| d1hc7a2 | 272 | Prolyl-tRNA synthetase (ProRS) {Thermus thermophil | 97.74 | |
| d1nj8a3 | 268 | Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc | 97.67 | |
| d1usya_ | 275 | ATP phosphoribosyltransferase regulatory subunit H | 97.46 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 97.15 | |
| d1nj1a3 | 265 | Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth | 97.09 | |
| d2pi2a1 | 128 | Replication protein A 32 KDa subunit (RPA32) fragm | 96.57 | |
| d1seta2 | 311 | Seryl-tRNA synthetase (SerRS) {Thermus thermophilu | 96.5 | |
| d1nnxa_ | 106 | Hypothetical protein YgiW {Escherichia coli [TaxId | 96.31 | |
| d1jmca1 | 116 | Replication protein A 70 KDa subunit (RPA70) {Huma | 96.23 | |
| d1o7ia_ | 115 | Archaeal ssDNA-binding protein {Archaeon Sulfolobu | 94.38 | |
| d2pi2e1 | 115 | Replication protein A 14 KDa (RPA14) subunit {Huma | 93.61 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 89.87 | |
| d1g5ha2 | 290 | The aaRS-like accessory subunit of mitochondrial p | 89.72 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 81.77 | |
| d1jjcb5 | 207 | Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, | 81.67 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 80.32 |
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=9.8e-81 Score=655.29 Aligned_cols=345 Identities=49% Similarity=0.856 Sum_probs=289.0
Q ss_pred CCCcccccCcchhhhccccchhhccHhhHHHHHHHHHHHHHHHHHhhhCCCeeccCceeecCCCCCCccccccccCCCCC
Q psy13353 108 LPFQIDEKNILEVTNLKYRVLYLRYKHMQKNLRLRYKVTMEVRKFLDSKKFIEIETPILSKSTPEGARDYLVPSRINPGE 187 (595)
Q Consensus 108 lP~~~~~~~~~~~~r~~~r~l~lr~~~~~~~l~~rs~i~~~iR~ff~~~gF~EV~TPiL~~~~~~ga~~f~~~~~~~~~~ 187 (595)
+|.+.+. ..++++|++|||||||++..+++|++||.|++++|+||.++||+||+||+|++++++|+..+..+...+.++
T Consensus 2 lP~~~~~-~~~~e~Rl~~R~LdLr~~~~~~ilr~Rs~i~~~iR~ff~~~gFlEV~TPiL~~~~~~g~~~~~~~~~~~~~~ 80 (346)
T d1c0aa3 2 LPLDSNH-VNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGK 80 (346)
T ss_dssp CSSCTTS-CCCHHHHHHTHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSSSCCCEEECSSSTTC
T ss_pred CCCCCCC-CCCHHHHhhchHHhhCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCccccccccccccCCCc
Confidence 5666554 567899999999999999999999999999999999999999999999999999999987765666667788
Q ss_pred eeeccCChHHHHHHHHhhCCCceEEEecceecCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCC
Q psy13353 188 FFALPQSPQLFKQLLMVANFDRYYQITKCFRDEDLRSDRQPEFTQIDCETSFMNEEEIRNLFEEMIRVIFYKTLNIKLPN 267 (595)
Q Consensus 188 ~~~L~~Spql~~q~ll~~g~~rvf~i~~~FR~E~~~~~r~~EFt~lE~e~~~~~~~dl~~~~E~ll~~l~~~~~~~~~~~ 267 (595)
.+||+||||+|||+++++|++|||+||||||+|+++++||+||||||||++|.+++++|+++|+++++++..+.+.++ .
T Consensus 81 ~~~L~~Spel~lk~ll~~g~~~Vf~i~~~FR~E~~~~~H~~EFtmLE~e~a~~~~~~~m~~~E~li~~l~~~~~~~~~-~ 159 (346)
T d1c0aa3 81 FYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDL-G 159 (346)
T ss_dssp EEECCSCSHHHHHHHHHTTCCEEEEEEEEECCCCCBTTBCSEEEEEEEEEESCCHHHHHHHHHHHHHHHHHHHHSCCC-C
T ss_pred cccCCcCHHHHHHHHhhcCCCceEEEeeeccccccCchhhhHhhhhccccccccHhHhHHHHHHHHHHHHHHHhCCcC-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999998876 6
Q ss_pred CCccccHHHHHHHhCCCCCccccchhhcchhhhhhccchhhHHHHhhccCCeeEEEecCCCCccchhhhHHHHHHHHHhC
Q psy13353 268 PFPVIEWSTAIKLYGSDKPDMCIKLIFTDLTNIMKDSDFKLFSKIANMKNGRIIGLKIPGGFSISRNEINYYTQFVKTYG 347 (595)
Q Consensus 268 ~f~rity~ea~~~~~~d~p~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 347 (595)
+|++++|.+|+.+|+.+.++++....... .....+
T Consensus 160 ~~~~~~~~e~~~~~~~~~~~l~~~~~~~~-----------------------~~~~~~---------------------- 194 (346)
T d1c0aa3 160 DFPVMTFAEAERRYGSDKPDLRDESKWAP-----------------------LWVIDF---------------------- 194 (346)
T ss_dssp SCCEEEHHHHHHHHSCSSCCTTCSSCCCE-----------------------EEEECC----------------------
T ss_pred ccceeeHHHHHHHhcccccchhhHhhhhh-----------------------hccccc----------------------
Confidence 89999999999999988876542110000 000000
Q ss_pred CCCceEEEEeccccccCCCCcccccccCHHHHHHHHHHhcCcCCCeEEecCCchhhHHHHHHHHHHHhcccCcccccccc
Q psy13353 348 AKGLTYIKIHKISKEFDGLKSPIIKYFNNLILEKIINKTEAQNGDIIFLGGDEKNIVNNFMSALRIKIGYSDFGKRNNIL 427 (595)
Q Consensus 348 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~gd~~~~~~~~~~~~~~~lg~~r~~l~~~~~~~~~~l~ 427 (595)
+. +.. .+.
T Consensus 195 ---------------------~~-------------------------~~~----------------~~~---------- 202 (346)
T d1c0aa3 195 ---------------------PM-------------------------FED----------------DGE---------- 202 (346)
T ss_dssp ---------------------BS-------------------------EEE----------------CSS----------
T ss_pred ---------------------cc-------------------------cch----------------hcc----------
Confidence 00 000 000
Q ss_pred cCCCccEEEEecCCCccccccccccccccCCCCCCCCCCcccccCccccccceeeEEecCEEEeecccccCCHHHHHHHH
Q psy13353 428 NNKWHPLWVINFPMFKYDKINNNWIARHHPFTAPKDGYEDFIITNPEKIFSKAYDLIINGWEIGGGSIRIHDAEIQKKIF 507 (595)
Q Consensus 428 ~~~~~p~~V~dfP~~~~~~~~~~~~a~~~PF~~~~~~~~~l~~~dp~~~~~~~fDl~~~G~Ei~gGs~R~~d~~~~~~~~ 507 (595)
.....+++++++|.. ..||++. .+|...++++|||+++|+||+|||+|+||+++|+++|
T Consensus 203 ~~l~~~~~~~~~p~~------------~~~~~~~---------~~~~~~~a~~fdl~~~G~El~nG~~rl~d~~~~~~r~ 261 (346)
T d1c0aa3 203 GGLTAMHHPFTSPKD------------MTAAELK---------AAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVF 261 (346)
T ss_dssp SCEEESSCTTBCBSS------------CCHHHHH---------HSCTTCBBSEEEEEETTEEEEEEEEBCCCHHHHHHHH
T ss_pred cceeeeEeeccccch------------hhHHHhc---------cCCccccccccccCcCCEEEechhhhhchHHHHHHHH
Confidence 000111222333432 1334332 2333478999999999999999999999999999999
Q ss_pred HHcCCChhhhhhcHHHHHHHhhCCCCCccceeccHHHHHHHHcCCCCccccccCCCCCCccccCCCCCCcCChhhhhhcc
Q psy13353 508 KVLNIDNKIVKTQFGFLLNSLKYGAPPHGGIAFGLDRLITIMTGSKSIRDVIAFPKTQSAQCLLTNAPSIVDEKQLNELN 587 (595)
Q Consensus 508 ~~~g~~~~~~~~~~~~yL~al~~G~PPh~G~glGlDRLvm~l~g~~~IRdvi~FPr~~~~~~~~~~~p~~~~~~~l~~~~ 587 (595)
++.|+++.+..+.|.|||+|++||+|||||||||+|||+|+++|.+|||||++|||++++.|||++||+.++.+||++||
T Consensus 262 ~~~~~~~~~~~e~~~~ylda~~~G~PP~~G~glGldRL~m~l~g~~~Irdvi~FPRt~~~~~~~~~~p~~~~~~~~~~~~ 341 (346)
T d1c0aa3 262 GILGINEEEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPTALAELS 341 (346)
T ss_dssp HHTTCCHHHHHHHHHHHHHHTTTTCCCEEEEEEEHHHHHHHHHTCSCGGGGSSSCCCTTSCBTTTTBSCCCCHHHHHHTT
T ss_pred HHhCccccchHHHHHHHHHHHHCCCCCceeEeEHHHHHHHHHcCCCcHHheecCCCCCCCCCcccCCCCCCCHHHHHhhC
Confidence 99999988777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q psy13353 588 ILYKK 592 (595)
Q Consensus 588 ~~~~~ 592 (595)
|+++.
T Consensus 342 ~~~~~ 346 (346)
T d1c0aa3 342 IQVVK 346 (346)
T ss_dssp CCCCC
T ss_pred eEeeC
Confidence 99874
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l0wa1 b.40.4.1 (A:1-104) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1b8aa1 b.40.4.1 (A:1-103) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1n9wa1 b.40.4.1 (A:1-93) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1eova1 b.40.4.1 (A:71-204) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1e1oa1 b.40.4.1 (A:11-153) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1c0aa2 d.74.4.1 (A:288-420) Prokaryotic AspRS, insert domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1l0wa2 d.74.4.1 (A:295-414) Prokaryotic AspRS, insert domain {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1zq1c2 d.74.4.1 (C:277-407) Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2d6fc2 d.74.4.1 (C:271-395) Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain {Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
| >d12asa_ d.104.1.1 (A:) Asparagine synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
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| >d2pi2a1 b.40.4.3 (A:44-171) Replication protein A 32 KDa subunit (RPA32) fragment {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} | Back information, alignment and structure |
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| >d1nnxa_ b.40.10.1 (A:) Hypothetical protein YgiW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1jmca1 b.40.4.3 (A:183-298) Replication protein A 70 KDa subunit (RPA70) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1o7ia_ b.40.4.3 (A:) Archaeal ssDNA-binding protein {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
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| >d2pi2e1 b.40.4.3 (E:3-117) Replication protein A 14 KDa (RPA14) subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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