BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13364
(285 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/125 (68%), Positives = 97/125 (77%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG IGG +F KGFRN+P G+N R G T IK ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
L G+FAVWG +FSTIDCS+V +R KEDPWNSI SGA TG ILAARNG AM GSA +GG
Sbjct: 61 QLGGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 57/76 (75%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G T IK ++P L G+FAVWG +FSTIDCS+V +R KEDPWNSI SGA TG ILAARNG
Sbjct: 50 GSLTAIKTRAPQLGGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA +GG + L
Sbjct: 110 VAMVGSAAMGGILLAL 125
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 182 bits (463), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/125 (69%), Positives = 97/125 (77%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG IGG +F IKGFRN+P G+N R G T IK ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
L G+FAVWG +FS IDCS+V VR KEDPWNSI SGA TG ILAARNG AM GSA +GG
Sbjct: 61 QLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G T IK ++P L G+FAVWG +FS IDCS+V VR KEDPWNSI SGA TG ILAARNG
Sbjct: 50 GSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA +GG + L
Sbjct: 110 VAMVGSAAMGGILLAL 125
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 85/125 (68%), Positives = 96/125 (76%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG IGG +F KGFRN+P G+N R G T IK ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
L G+FAVWG +FSTIDC +V +R KEDPWNSI SGA TG ILAARNG AM GSA +GG
Sbjct: 61 QLGGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 97.4 bits (241), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 56/76 (73%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G T IK ++P L G+FAVWG +FSTIDC +V +R KEDPWNSI SGA TG ILAARNG
Sbjct: 50 GSLTAIKTRAPQLGGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA +GG + L
Sbjct: 110 VAMVGSAAMGGILLAL 125
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 98/125 (78%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG+IGG +F IKGFRNAP G+ RF G ++ ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
+ G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+G AM GSA++GG
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G ++ ++P + G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+G
Sbjct: 50 GSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA++GG + L
Sbjct: 110 LAMVGSAMMGGILLAL 125
>sp|Q9VNA0|TI17A_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2
Length = 179
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 95/125 (76%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+ EY REPCP+RIV+DCGGAF MG +GG F IKGFRNAPSG+ R G ++ +S
Sbjct: 1 MAEYGREPCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSG 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
++ GNFAVWGA FS IDCSLVY RKKEDPWN+IISGA TGGILAAR G+ +M SAL+GG
Sbjct: 61 LVGGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ALLAL 125
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 58/76 (76%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G ++ +S ++ GNFAVWGA FS IDCSLVY RKKEDPWN+IISGA TGGILAAR G+
Sbjct: 50 GGLAAVRARSGLVGGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGL 109
Query: 65 PAMAGSALIGGKVRTL 80
+M SAL+GG + L
Sbjct: 110 TSMLSSALVGGALLAL 125
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 175 bits (443), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 97/125 (77%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG+IGG +F IKGFRNAP G+ R G ++ ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
+ G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+G AM GSA++GG
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G ++ ++P + G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+G
Sbjct: 50 GSANAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA++GG + L
Sbjct: 110 LAMVGSAMMGGILLAL 125
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/125 (64%), Positives = 96/125 (76%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEYAREPCPWRIVDDCGGAFTMG+IGG +F IKGFRNAP GM R G ++ ++P
Sbjct: 1 MEEYAREPCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAP 60
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
+ G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+ AM GSA++GG
Sbjct: 61 QIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGG 120
Query: 275 KLKRL 279
L L
Sbjct: 121 ILLAL 125
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/76 (55%), Positives = 55/76 (72%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G ++ ++P + G+FAVWG +FSTIDC LV +R KEDPWNSI SGA TG +LAAR+
Sbjct: 50 GSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVP 109
Query: 65 PAMAGSALIGGKVRTL 80
AM GSA++GG + L
Sbjct: 110 LAMVGSAMMGGILLAL 125
>sp|Q9VGA2|TI17C_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1
Length = 222
Score = 171 bits (434), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 77/117 (65%), Positives = 96/117 (82%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
EY R+PCP RIV+DCG AF MG IGG+LF +KGFRNAP+G+ RR G +K ++P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSI 61
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
AG+FAVWGA FST+DC+LV+ R++ED WNSI+SGAATGGILAARNG+ AMA SAL+G
Sbjct: 62 AGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVG 118
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 58/65 (89%)
Query: 10 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 69
+K ++P +AG+FAVWGA FST+DC+LV+ R++ED WNSI+SGAATGGILAARNG+ AMA
Sbjct: 54 VKMRTPSIAGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMAN 113
Query: 70 SALIG 74
SAL+G
Sbjct: 114 SALVG 118
>sp|Q9VN97|TI17D_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=3 SV=1
Length = 224
Score = 161 bits (408), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 71/117 (60%), Positives = 93/117 (79%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
EY R+PCP RIV+DCG AF MG +GG+LF +KGFRNAPSG+ R G +++ ++P +
Sbjct: 2 EYNRQPCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAI 61
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
AG+FA+WGA FST+DC +V R++ED WN+I+SGAATGGILAARNG+ AMA SA +G
Sbjct: 62 AGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVG 118
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 57/70 (81%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G +++ ++P +AG+FA+WGA FST+DC +V R++ED WN+I+SGAATGGILAARNG+
Sbjct: 49 GGIESVRLRTPAIAGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGI 108
Query: 65 PAMAGSALIG 74
AMA SA +G
Sbjct: 109 RAMANSAFVG 118
>sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2
OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2
Length = 243
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
E +REPCP RI+DD GGAF MG +GG+ FH IKG N+P G RF+G T ++ +P
Sbjct: 5 ETSREPCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKG--SRFVGGTQSVSMNAPRT 62
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGGKL 276
G+FAVWG +FST DC++VY+R+KEDPWNSII+GAATGG L+ R G A + SA+ GG L
Sbjct: 63 GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVL 122
Query: 277 KRL 279
L
Sbjct: 123 LAL 125
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 56/77 (72%)
Query: 4 VGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
VG T ++ +P G+FAVWG +FST DC++VY+R+KEDPWNSII+GAATGG L+ R G
Sbjct: 49 VGGTQSVSMNAPRTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG 108
Query: 64 VPAMAGSALIGGKVRTL 80
A + SA+ GG + L
Sbjct: 109 AGAASRSAIFGGVLLAL 125
>sp|Q9LN27|TI171_ARATH Mitochondrial import inner membrane translocase subunit TIM17-1
OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1
Length = 218
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
E +REPCP RI+DD GGAF MG +GG+ +H I+G N+P G R G ++ P
Sbjct: 5 ESSREPCPDRILDDVGGAFAMGAVGGSAYHLIRGIYNSPGGA--RLSGGVQALRMSGPRS 62
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGGKL 276
G+F+VWG ++ST DC+LVY R+KEDPWNSI+SGAATGG L+ R G+ A A SAL+GG L
Sbjct: 63 GGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGGVL 122
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 52/71 (73%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G ++ P G+F+VWG ++ST DC+LVY R+KEDPWNSI+SGAATGG L+ R G+
Sbjct: 50 GGVQALRMSGPRSGGSFSVWGGLYSTFDCALVYARQKEDPWNSILSGAATGGFLSLRQGL 109
Query: 65 PAMAGSALIGG 75
A A SAL+GG
Sbjct: 110 GASARSALVGG 120
>sp|O44477|TIM17_CAEEL Probable mitochondrial import inner membrane translocase subunit
Tim17 OS=Caenorhabditis elegans GN=tim-17 PE=3 SV=1
Length = 181
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 84/119 (70%), Gaps = 2/119 (1%)
Query: 155 LEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+EEY REPCP+RI DD G AF MGL+GG++F G++NA G ++ +GM ++ +S
Sbjct: 1 MEEYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKG--KKLVGMMREVRMRST 58
Query: 215 ILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
+ FA WG MFSTIDC LV +RKKEDP NSI+SG TG +LA R+G MAGSA++G
Sbjct: 59 LTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILG 117
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 50/71 (70%)
Query: 4 VGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
VGM ++ +S + FA WG MFSTIDC LV +RKKEDP NSI+SG TG +LA R+G
Sbjct: 47 VGMMREVRMRSTLTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSG 106
Query: 64 VPAMAGSALIG 74
MAGSA++G
Sbjct: 107 PKVMAGSAILG 117
>sp|P59670|TIM17_NEUCR Mitochondrial import inner membrane translocase subunit tim-17
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-17 PE=2 SV=1
Length = 155
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
++ R+PCPW I++D GGAF MG IGG ++HGIKGFRN+P G R +G T IK ++P L
Sbjct: 2 DHTRDPCPWVILNDFGGAFAMGAIGGTIWHGIKGFRNSPYGERR--IGAITAIKMRAPAL 59
Query: 217 AGNFAVWGAMFSTIDCSLVYVR-KKEDPWNSIISGAATGGILAARNGVPAMAGSAL 271
GNF VWG +FST DC++ +R KEDPWNSI++G TGG LA R G A A+
Sbjct: 60 GGNFGVWGGLFSTFDCAIKGLRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAI 115
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 4 VGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVR-KKEDPWNSIISGAATGGILAARN 62
+G T IK ++P L GNF VWG +FST DC++ +R KEDPWNSI++G TGG LA R
Sbjct: 46 IGAITAIKMRAPALGGNFGVWGGLFSTFDCAIKGLRNHKEDPWNSILAGFFTGGALAVRG 105
Query: 63 GVPAMAGSAL 72
G A A+
Sbjct: 106 GYKAARNGAI 115
>sp|P39515|TIM17_YEAST Mitochondrial import inner membrane translocase subunit TIM17
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM17 PE=1 SV=1
Length = 158
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
+++R+PCP I++D GGAF MG IGG ++HGIKGFRN+P G R G + IK ++P+L
Sbjct: 4 DHSRDPCPIVILNDFGGAFAMGAIGGVVWHGIKGFRNSPLG--ERGSGAMSAIKARAPVL 61
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 262
GNF VWG +FST DC++ VRK+EDPWN+II+G TGG LA R G
Sbjct: 62 GGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGG 107
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
G + IK ++P+L GNF VWG +FST DC++ VRK+EDPWN+II+G TGG LA R G
Sbjct: 49 GAMSAIKARAPVLGGNFGVWGGLFSTFDCAVKAVRKREDPWNAIIAGFFTGGALAVRGG 107
>sp|P87130|TIM17_SCHPO Mitochondrial import inner membrane translocase subunit tim17
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim17 PE=3 SV=1
Length = 164
Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Query: 157 EYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL 216
++ R+PCP+ I++D G AF+MG IGGA++H IKG+RN+P G R + K ++P+L
Sbjct: 5 DHTRDPCPYVILNDFGAAFSMGTIGGAIWHSIKGWRNSPPGEKR--ISAIAAAKTRAPVL 62
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 262
GNF VWG +FST DC++ VR+KEDPWN+II+G TGG LA R G
Sbjct: 63 GGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGG 108
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%)
Query: 11 KQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
K ++P+L GNF VWG +FST DC++ VR+KEDPWN+II+G TGG LA R G
Sbjct: 56 KTRAPVLGGNFGVWGGLFSTFDCAVKGVRRKEDPWNAIIAGFFTGGALAVRGG 108
>sp|Q9LYG1|TI173_ARATH Mitochondrial import inner membrane translocase subunit TIM17-3
OS=Arabidopsis thaliana GN=TIM17-3 PE=2 SV=1
Length = 133
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 153 VELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQK 212
++ ++ ++E +RIV+ G AF G +GG+++H ++G N+P G R++G T
Sbjct: 1 MDTKKKSKEHGLYRIVNAIGYAFGAGAVGGSVYHFVRGAYNSPIGA--RYVGGTQAASMN 58
Query: 213 SPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALI 272
+P L G FAV+G + ST D +LV +RKKEDPWNSI++GAATGG+L+ R GV A + SA++
Sbjct: 59 APRLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVM 118
Query: 273 GG 274
G
Sbjct: 119 FG 120
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 4 VGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
VG T +P L G FAV+G + ST D +LV +RKKEDPWNSI++GAATGG+L+ R G
Sbjct: 49 VGGTQAASMNAPRLGGTFAVFGGLLSTFDYALVRIRKKEDPWNSIVAGAATGGVLSIRKG 108
Query: 64 VPAMAGSALIGG 75
V A + SA++ G
Sbjct: 109 VVAASTSAVMFG 120
>sp|Q54K35|TIM17_DICDI Mitochondrial import inner membrane translocase subunit tim17
OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1
Length = 183
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 70/113 (61%), Gaps = 2/113 (1%)
Query: 162 PCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFA 221
PCP +I D GGAF +G + + + GF+ +P N+R L +++KSP GNFA
Sbjct: 4 PCPDKIWQDAGGAFAIGYVLMGVVNIGLGFKRSPP--NKRVLYTFALLRKKSPKFGGNFA 61
Query: 222 VWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGG 274
+WG++FS DC+L Y+RK ED N I +GA TGGILAAR+G +A GG
Sbjct: 62 IWGSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQAAAFGG 114
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 10 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 69
+++KSP GNFA+WG++FS DC+L Y+RK ED N I +GA TGGILAAR+G
Sbjct: 49 LRKKSPKFGGNFAIWGSLFSGFDCTLSYIRKTEDTVNPIAAGALTGGILAARSGWKHSVQ 108
Query: 70 SALIGG 75
+A GG
Sbjct: 109 AAAFGG 114
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 150 TPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMT 206
+ E ++ E A E C ++ V C G F +G G GI GF +
Sbjct: 54 SEEQKMIERAMESCAFKAVLACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREVL 113
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 266
+ Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A
Sbjct: 114 KDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAG 173
Query: 267 A 267
A
Sbjct: 174 A 174
Score = 47.8 bits (112), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 68
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A A
Sbjct: 118 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGA 174
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 150 TPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMT 206
+ E ++ E A E C ++ V C G F +G G GI GF +
Sbjct: 56 SEEQKMIERAMESCAFKAVLACVGGFVLGGAFGIFTAGIDTNVGFDPKDPYRTPTAKEVL 115
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 266
+ Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A
Sbjct: 116 KDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAG 175
Query: 267 A 267
A
Sbjct: 176 A 176
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 68
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGA 176
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 54/119 (45%), Gaps = 3/119 (2%)
Query: 150 TPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMT 206
+ E ++ E A E C ++ C G F +G G GI GF +
Sbjct: 56 SEEQKMIERAMESCAFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAREVL 115
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 265
+ Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A
Sbjct: 116 KDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKA 174
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 66
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKA 174
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 150 TPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMT 206
+ E ++ E E C ++ C G F +G G GI GF +
Sbjct: 48 SEEQKMMERVMESCGFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAKEVL 107
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 266
+ Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A
Sbjct: 108 KDMGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAG 167
Query: 267 A 267
A
Sbjct: 168 A 168
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 68
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A A
Sbjct: 112 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGA 168
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 150 TPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMT 206
+ E ++ E A E C ++ C G F +G G GI GF +
Sbjct: 56 SEEQKMIEKAMESCAFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPYRTPTAKEVL 115
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 266
+ Q+ A NFA+ GAMFS +C + R D NS+ISG TGG + R G+ A
Sbjct: 116 KDMGQRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAG 175
Query: 267 A 267
A
Sbjct: 176 A 176
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 68
Q+ A NFA+ GAMFS +C + R D NS+ISG TGG + R G+ A A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAGA 176
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 152 EVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIK---GFRNAPSGMNRRFLGMTTT 208
E ++ E E C ++ C G F +G G GI GF +
Sbjct: 48 EQKMMERVMESCGFKAALACVGGFVLGGAFGVFTAGIDTNVGFDPKDPLRTPTAKEVLRD 107
Query: 209 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 265
+ Q+ A NFA+ GAMFS +C + R K D NS++SG TGG + R G+ A
Sbjct: 108 MGQRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAIGFRAGLKA 164
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 66
Q+ A NFA+ GAMFS +C + R K D NS++SG TGG + R G+ A
Sbjct: 110 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAIGFRAGLKA 164
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 10 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 69
+ Q+S A NFA GA+FS I+C + +R K D N + +G TG IL A+NG P A
Sbjct: 112 MGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAIL-AKNGGPQAAA 170
Query: 70 SALIG 74
G
Sbjct: 171 VGCAG 175
Score = 44.7 bits (104), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 209 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 268
+ Q+S A NFA GA+FS I+C + +R K D N + +G TG IL A+NG P A
Sbjct: 112 MGQRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAIL-AKNGGPQAAA 170
Query: 269 SALIG 273
G
Sbjct: 171 VGCAG 175
>sp|Q2UAP8|TIM22_ASPOR Mitochondrial import inner membrane translocase subunit tim22
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=tim22 PE=3 SV=1
Length = 184
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGIL 58
A NF + GA++S +C + +R K D NS+ISG TGGIL
Sbjct: 111 AKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGIL 257
A NF + GA++S +C + +R K D NS+ISG TGGIL
Sbjct: 111 AKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
>sp|A1XJK0|TI224_ARATH Mitochondrial import inner membrane translocase subunit TIM22-4
OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3
Length = 142
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 200 RRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAA 259
++F+ + Q+S FAV G +FS +C + R K D N+ I+G TGG ++A
Sbjct: 54 QQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSA 113
Query: 260 RNG 262
R G
Sbjct: 114 RGG 116
Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 12 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
Q+S FAV G +FS +C + R K D N+ I+G TGG ++AR G
Sbjct: 65 QRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGG 116
>sp|A2RVP7|TI221_ARATH Mitochondrial import inner membrane translocase subunit TIM22-1
OS=Arabidopsis thaliana GN=TIM22-1 PE=2 SV=1
Length = 173
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 200 RRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAA 259
++F+ + Q+S FAV G +FS +C + R K D N+ I+G TGG ++A
Sbjct: 85 QQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSA 144
Query: 260 RNG 262
R G
Sbjct: 145 RGG 147
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 21 FAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG 63
FAV G +FS +C + R K D N+ I+G TGG ++AR G
Sbjct: 105 FAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSARGG 147
>sp|Q9LNQ1|TI231_ARATH Mitochondrial import inner membrane translocase subunit TIM23-1
OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1
Length = 187
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 18/141 (12%)
Query: 137 YVNY-----GENLVHVEATPEVEL-EEYAREPCPW--RIVDDCGGAFTMGLIGGA---LF 185
Y NY + L + +PE EE ++ W + G + G + GA +F
Sbjct: 21 YQNYQVPIKSQYLYKLPTSPEFLFTEESLKQRRSWGENLTFYTGTGYLAGSVAGASAGIF 80
Query: 186 HGIKGFRNAPS---GMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKED 242
GIK F N + +NR + + Q + G +++ I+ +V V K+D
Sbjct: 81 SGIKSFENGDTTKLKINR----ILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDKDD 136
Query: 243 PWNSIISGAATGGILAARNGV 263
W S+++G TG + A GV
Sbjct: 137 VWTSVVAGLGTGAVFRAARGV 157
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 25 GAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G +++ I+ +V V K+D W S+++G TG + A GV
Sbjct: 118 GLIYAGIESGVVAVTDKDDVWTSVVAGLGTGAVFRAARGV 157
>sp|Q6BZY4|TIM22_YARLI Mitochondrial import inner membrane translocase subunit TIM22
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM22 PE=3 SV=2
Length = 185
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 74
A NF G +FS +C + +R K D WN + +G TGG LA + G A AL+G
Sbjct: 104 AKNFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAGPQA----ALVG 156
Score = 40.8 bits (94), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
A NF G +FS +C + +R K D WN + +G TGG LA + G A AL+G
Sbjct: 104 AKNFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAGPQA----ALVG 156
>sp|P87146|TIM22_SCHPO Mitochondrial import inner membrane translocase subunit tim22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim22 PE=3 SV=1
Length = 175
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 67
A NF + G ++S +C + R K D +N+I +G TGG LA R+G A+
Sbjct: 104 AKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAI 153
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 266
A NF + G ++S +C + R K D +N+I +G TGG LA R+G A+
Sbjct: 104 AKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAI 153
>sp|Q75E80|TIM22_ASHGO Mitochondrial import inner membrane translocase subunit TIM22
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM22 PE=3 SV=1
Length = 201
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 74
A NF G ++S ++C++ +R K D +N + +G TGG LA ++G A ALIG
Sbjct: 120 AKNFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSGPSA----ALIG 172
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
A NF G ++S ++C++ +R K D +N + +G TGG LA ++G A ALIG
Sbjct: 120 AKNFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSGPSA----ALIG 172
>sp|Q6BT35|TIM22_DEBHA Mitochondrial import inner membrane translocase subunit TIM22
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1
Length = 182
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 74
A NF G ++S ++C++ +R K D +N + +G TGG LA R G A AL+G
Sbjct: 101 AKNFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGGLAIRAGPQA----ALVG 153
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
A NF G ++S ++C++ +R K D +N + +G TGG LA R G A AL+G
Sbjct: 101 AKNFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGGLAIRAGPQA----ALVG 153
>sp|Q6FT37|TIM22_CANGA Mitochondrial import inner membrane translocase subunit TIM22
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM22 PE=3 SV=1
Length = 193
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 74
A NF G +++ ++C++ +R K D +N I +G TGG LA ++G A AL+G
Sbjct: 112 AKNFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSGPQA----ALVG 164
Score = 38.9 bits (89), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
A NF G +++ ++C++ +R K D +N I +G TGG LA ++G A AL+G
Sbjct: 112 AKNFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSGPQA----ALVG 164
>sp|Q6CRJ6|TIM22_KLULA Mitochondrial import inner membrane translocase subunit TIM22
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM22
PE=3 SV=1
Length = 196
Score = 38.1 bits (87), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 18 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 74
A NF G ++S ++C + +R K D +N + +G TGG LA ++G A AL+G
Sbjct: 115 AKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSGPQA----ALVG 167
Score = 38.1 bits (87), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 217 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 273
A NF G ++S ++C + +R K D +N + +G TGG LA ++G A AL+G
Sbjct: 115 AKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSGPQA----ALVG 167
>sp|P0CR88|TIM22_CRYNJ Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIM22 PE=3 SV=1
Length = 187
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 34/171 (19%)
Query: 110 IYLRGHRPLTYGYN--KSKELRSSPVMERYVNYGENLVHVEATPEVELEEYAREPCPWRI 167
IYL G PL G + + +E++++ +RY+ E CP ++
Sbjct: 15 IYLPGQEPLPAGTSDWERQEMQTALKYQRYMGM------------------VMESCPLKV 56
Query: 168 VDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL----------A 217
G GL G F + ++R +TTT Q +
Sbjct: 57 TIAGVG----GLAIGGFFSLMSATFAYEDPLSRASNKLTTTRAQTMFVFKEMGRNMWSSG 112
Query: 218 GNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 268
FA G ++S ++C + R K D +N + +G TG ILA G AM G
Sbjct: 113 RGFAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTAMLG 163
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 21 FAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGGKV 77
FA G ++S ++C + R K D +N + +G TG IL ARN P +A++GG V
Sbjct: 115 FAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAIL-ARNAGP----TAMLGGGV 166
>sp|P0CR89|TIM22_CRYNB Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIM22 PE=3 SV=1
Length = 187
Score = 37.4 bits (85), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 34/171 (19%)
Query: 110 IYLRGHRPLTYGYN--KSKELRSSPVMERYVNYGENLVHVEATPEVELEEYAREPCPWRI 167
IYL G PL G + + +E++++ +RY+ E CP ++
Sbjct: 15 IYLPGQEPLPAGTSDWERQEMQTALKYQRYMGM------------------VMESCPLKV 56
Query: 168 VDDCGGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPIL----------A 217
G GL G F + ++R +TTT Q +
Sbjct: 57 TIAGVG----GLAIGGFFSLMSATFAYEDPLSRASNKLTTTRAQTMFVFKEMGRNMWSSG 112
Query: 218 GNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 268
FA G ++S ++C + R K D +N + +G TG ILA G AM G
Sbjct: 113 RGFAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTAMLG 163
Score = 35.0 bits (79), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 21 FAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGGKV 77
FA G ++S ++C + R K D +N + +G TG IL ARN P +A++GG V
Sbjct: 115 FAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAIL-ARNAGP----TAMLGGGV 166
>sp|Q38820|TI232_ARATH Mitochondrial import inner membrane translocase subunit TIM23-2
OS=Arabidopsis thaliana GN=TIM23-2 PE=1 SV=1
Length = 188
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 138 VNYGENLVHVEATPEVEL-EEYAREPCPW--RIVDDCGGAFTMGLIGGALFHGIKGFRNA 194
+N + L + +PE EE R+ W + G A+ G + GA I G ++
Sbjct: 28 INKSQYLYKLPTSPEFLFTEEALRQRRSWGENLTFYTGTAYLGGSVAGASVGVITGVKSF 87
Query: 195 PSGMNRRFL--GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAA 252
SG + + + Q + G +++ I+ +V ++D W S+++G
Sbjct: 88 ESGDTTKLKINRILNSSGQTGRTWGNRIGIIGLVYAGIESGIVAATDRDDVWTSVVAGLG 147
Query: 253 TGGILAARNGV 263
TG + A GV
Sbjct: 148 TGAVCRAARGV 158
>sp|Q9USM7|TIM23_SCHPO Mitochondrial import inner membrane translocase subunit tim23
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim23 PE=3 SV=1
Length = 210
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 171 CGGAFTMGL-IGG--ALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMF 227
G ++ GL IGG L G+K ++ S R G+ + ++ P + + V ++
Sbjct: 87 TGTSYLSGLAIGGLWGLNEGMKKTKDITS-TRLRLNGILNGVTRRGPFVGNSLGVLALVY 145
Query: 228 STIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSA 270
+ I+ + Y R+K NS+ +GA TG + + G+ AMA S+
Sbjct: 146 NGINSLIGYKRQKHGWENSVAAGALTGALYKSTRGLRAMAISS 188
Score = 33.5 bits (75), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 5 GMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGV 64
G+ + ++ P + + V +++ I+ + Y R+K NS+ +GA TG + + G+
Sbjct: 122 GILNGVTRRGPFVGNSLGVLALVYNGINSLIGYKRQKHGWENSVAAGALTGALYKSTRGL 181
Query: 65 PAMAGSA 71
AMA S+
Sbjct: 182 RAMAISS 188
>sp|Q12328|TIM22_YEAST Mitochondrial import inner membrane translocase subunit TIM22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM22 PE=1 SV=1
Length = 207
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 8 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 66
T + +KS A NF G +++ ++C + +R K D +N + +G TG LA + G A
Sbjct: 116 TDMGKKSYSSAKNFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAGPQA 174
Score = 35.8 bits (81), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 207 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 265
T + +KS A NF G +++ ++C + +R K D +N + +G TG LA + G A
Sbjct: 116 TDMGKKSYSSAKNFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAGPQA 174
>sp|Q464Z4|EF1A_METBF Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=tuf PE=3 SV=1
Length = 422
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 152 EVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHG-IKGFRNAPSGMNRRFLGMTTTIK 210
EV+ E E P + D G G+ + G + G + P + F+G ++
Sbjct: 267 EVKSIEMHHEEIPQALPGDNIGWNVRGIGKADVRRGDVCGHTDNPPKVADTFVGQIVVLQ 326
Query: 211 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 243
S I AG V+ A S I C L+ + KK DP
Sbjct: 327 HPSAITAGYTPVFHAHTSQIACQLIELNKKLDP 359
>sp|Q8TRC4|EF1A_METAC Elongation factor 1-alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tuf PE=3
SV=1
Length = 422
Score = 35.8 bits (81), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 190 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 243
G + P + F+G ++ S I AG V+ A S I C L+ + KK DP
Sbjct: 306 GHTDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDP 359
>sp|Q8PUR8|EF1A_METMA Elongation factor 1-alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=tuf PE=3 SV=1
Length = 422
Score = 35.4 bits (80), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 190 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 243
G + P + F+G ++ S I AG V+ A S I C L+ + KK DP
Sbjct: 306 GHADNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDP 359
>sp|C3PEA3|Y560_CORA7 Maf-like protein cauri_0560 OS=Corynebacterium aurimucosum (strain
ATCC 700975 / DSM 44827 / CN-1) GN=cauri_0560 PE=3 SV=1
Length = 198
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 135 ERYVNYGENLVHVEATPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNA 194
ER+V VH + ++E YAR P +C GAFT+ +GG I+G ++
Sbjct: 116 ERFVEASRTTVHFAQASDADIEAYARTGEPL----ECAGAFTLEALGGWFIDRIEGDPSS 171
Query: 195 PSGMN 199
G++
Sbjct: 172 VIGLS 176
>sp|P32897|TIM23_YEAST Mitochondrial import inner membrane translocase subunit TIM23
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM23 PE=1 SV=1
Length = 222
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 172 GGAFTMGLIGGALFHGIKGFRNAP--SGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFST 229
G + +GL G ++G +N P S + + I ++ P L N + ++
Sbjct: 102 GAVYLLGLGIGGFSGMMQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNI 161
Query: 230 IDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSA 270
I+ ++ +R K D SI +GA TG + + G+ M S+
Sbjct: 162 INSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGYSS 202
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 10 IKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 69
I ++ P L N + ++ I+ ++ +R K D SI +GA TG + + G+ M
Sbjct: 141 ITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAGSIGAGALTGALFKSSKGLKPMGY 200
Query: 70 SA 71
S+
Sbjct: 201 SS 202
>sp|Q9UBC5|MYO1A_HUMAN Unconventional myosin-Ia OS=Homo sapiens GN=MYO1A PE=1 SV=1
Length = 1043
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 137 YVNYGENLVHVEATPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKG 190
Y N V +E T + E EEY RE PW VD F G+I + H +G
Sbjct: 399 YCNEKLQQVFIEMTLKEEQEEYKREGIPWTKVD----YFDNGIICKLIEHNQRG 448
>sp|Q8FRM5|Y735_COREF Maf-like protein CE0735 OS=Corynebacterium efficiens (strain DSM
44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
GN=CE0735 PE=3 SV=1
Length = 197
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 136 RYVNYGENLVHVEATPEVELEEYAREPCPWRIVDDCGGAFTMGLIGGALFHGIKGFRNAP 195
R V +H + ++E YAR P + C GAFT+ +GG I+G ++
Sbjct: 117 RVVEASRTTIHFADASDTDIEAYARSGEPLQ----CAGAFTLEALGGWFIDAIEGDPSSV 172
Query: 196 SGMN 199
G++
Sbjct: 173 IGLS 176
>sp|Q9D8B4|NDUAB_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Mus musculus GN=Ndufa11 PE=2 SV=2
Length = 141
Score = 32.7 bits (73), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 22 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN---GVPAMA----GSALI 73
A GAMF C VR+K +DP N I G A G L AR G AM G+A
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGARTHSYGTAAMGCVYMGTAAA 123
Query: 74 GGKVRTLELVLLFEPAPN 91
K+ LE LF P P
Sbjct: 124 LFKIGKLEGWELF-PTPK 140
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 221 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 261
A GAMF C VR+K +DP N I G A G L AR
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGART 105
>sp|Q54QM0|TIM22_DICDI Mitochondrial import inner membrane translocase subunit tim22
OS=Dictyostelium discoideum GN=timm22 PE=3 SV=1
Length = 179
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 15/120 (12%)
Query: 165 WRIVDDC----------GGAFTMGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSP 214
+ ++D+C GGAF G + GALF GF P+ + + K++
Sbjct: 45 YNLMDNCIVHGVRGMVMGGAF--GFLFGALFTPNSGFTPEPTTPTPLYRQVIDGFKEQGR 102
Query: 215 I---LAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSAL 271
A + ++ +++ +C++ R + D N I +G TG + A R G A G +
Sbjct: 103 SGLRSAKSLSIITLVYTGTECAIEKARGRTDKLNPIYAGCTTGAVFAGRAGPMAAVGGCV 162
>sp|Q8HXG6|NDUAB_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Bos taurus GN=NDUFA11 PE=1 SV=3
Length = 141
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 22 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 62
A GA+F C VR+K +DP N +I G A G IL AR
Sbjct: 64 AAIGAIFGLTSCISAQVREKPDDPLNYLIGGCAGGLILGART 105
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 221 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 261
A GA+F C VR+K +DP N +I G A G IL AR
Sbjct: 64 AAIGAIFGLTSCISAQVREKPDDPLNYLIGGCAGGLILGART 105
>sp|Q80W89|NDUAB_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Rattus norvegicus GN=Ndufa11 PE=2 SV=1
Length = 141
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 22 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 62
A GAMF C VR+K +DP N I G A G L AR
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGART 105
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 221 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 261
A GAMF C VR+K +DP N I G A G L AR
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGART 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.430
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,251,144
Number of Sequences: 539616
Number of extensions: 4994092
Number of successful extensions: 9681
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9556
Number of HSP's gapped (non-prelim): 128
length of query: 285
length of database: 191,569,459
effective HSP length: 116
effective length of query: 169
effective length of database: 128,974,003
effective search space: 21796606507
effective search space used: 21796606507
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)