RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy13364
         (285 letters)



>d2ixoa1 a.268.1.1 (A:2-317) Serine/threonine-protein phosphatase 2A
           regulatory subunit B', PTPA {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 316

 Score = 26.0 bits (57), Expect = 5.9
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 8/64 (12%)

Query: 77  VRTLELVLLFEPAPNQGTSIISFYNFLTYRY---RWIYLRGHRPLTYGYNKSKELRSSPV 133
           +R L L    EPA + G   +  +  L Y     +W  L    PL       +E+    +
Sbjct: 183 MRRLILTYTLEPAGSHGVWGLDDHFHLVYILGSSQWQLLDAQAPLQ-----PREILDKSL 237

Query: 134 MERY 137
           +  Y
Sbjct: 238 VREY 241


>d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 169

 Score = 25.6 bits (55), Expect = 6.6
 Identities = 7/34 (20%), Positives = 13/34 (38%)

Query: 99  FYNFLTYRYRWIYLRGHRPLTYGYNKSKELRSSP 132
             + L ++     L  H+   Y Y+  +  R S 
Sbjct: 18  KTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSK 51


>d2ixna1 a.268.1.1 (A:3-299) Serine/threonine-protein phosphatase 2A
           regulatory subunit B', PTPA {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 297

 Score = 25.6 bits (56), Expect = 7.0
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 5/61 (8%)

Query: 77  VRTLELVLLFEPAPNQGTSIISFYNFLTYRYRWIYLRGHRPLTYGYNKSKELRSSPVMER 136
           +R LE     EPA + G   +  Y+FL + +    L  H+ L     K   + ++ ++E 
Sbjct: 171 MRILETKYWLEPAGSHGVWGLDDYHFLPFLFGAFQLTTHKHL-----KPISIHNNELVEM 225

Query: 137 Y 137
           +
Sbjct: 226 F 226


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.138    0.430 

Gapped
Lambda     K      H
   0.267   0.0612    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,105,607
Number of extensions: 52615
Number of successful extensions: 89
Number of sequences better than 10.0: 1
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 3
Length of query: 285
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 201
Effective length of database: 1,254,276
Effective search space: 252109476
Effective search space used: 252109476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.1 bits)