BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13372
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R1F5|HYI_MOUSE Putative hydroxypyruvate isomerase OS=Mus musculus GN=Hyi PE=1 SV=2
Length = 277
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 153/273 (56%), Gaps = 12/273 (4%)
Query: 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQV 64
+ +AN++ LF +L ++ A GF+ E +W P + + L +A GL+ V
Sbjct: 4 LRFSANVSWLFPELPG-LPERLHAAGRAGFKAAEVAW--PYTESPQALASAAQTAGLRLV 60
Query: 65 LINTEVDEN----FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPI 120
LINT ++ G AV G+++ FR LE+ + YA AL P IH+M+G+ +
Sbjct: 61 LINTPRGDHEKGEMGLGAVPGRQAAFREGLEQAVLYAKALGCPRIHLMAGRVPQGADRAA 120
Query: 121 ASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-SVPGYYLSSFRVAERLIRELRAHG 179
+ T ENL +A L + +L L+EP+N + P Y+L + R A +++++ G
Sbjct: 121 VKGEMETVFVENLKHAAGVLAQENLVGLLEPINTRITDPQYFLDTPRQAAAILQKV---G 177
Query: 180 ISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELL 239
N+QLQ D F+ Q + G+LT +GHVQ+AQ PDR EP + GE+D+ Y+F+LL
Sbjct: 178 RPNLQLQMDIFHWQIMDGNLTGNIREFLPTVGHVQVAQVPDRGEPGSSGELDFTYLFQLL 237
Query: 240 AREGYEGYVGLEYKPQGNTKEGLEEFLKTFDLK 272
EGY+G+VG EY+P+G+T EGL +D +
Sbjct: 238 EDEGYQGFVGCEYRPRGDTVEGLSWLRSYWDRR 270
>sp|Q7T3H9|HYI_DANRE Putative hydroxypyruvate isomerase OS=Danio rerio GN=hyi PE=2 SV=2
Length = 276
Score = 167 bits (424), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIES-WFPPVGVTLEQLVAAQTRHGLKQV 64
K AN++ LF +L + + R AA GFR +E+ W L++L A+ GL+ V
Sbjct: 4 LKFCANISWLFTELP-EFPQRMRAAASAGFRAVEAAWL--YNTDLKELKTAKEETGLEFV 60
Query: 65 LINTEVDE----NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPI 120
LINT + + G AAV G+E EFR L+ +QYA AL+ IH+M+G+ + +
Sbjct: 61 LINTPPGDASAGDLGLAAVPGREQEFRQGLDLAVQYAKALDCTRIHLMAGRVPAGSERCA 120
Query: 121 ASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-SVPGYYLSSFRVAERLIRELRAHG 179
+ T NL +A L++ L LIEP+N + P Y+L S A +++ +
Sbjct: 121 LALQMEDTFVHNLKHAAGVLDKEGLLGLIEPINSRITDPRYFLHSPHQAAEILQRVDH-- 178
Query: 180 ISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELL 239
++++Q D F+ Q + G+LTH + GH+QIAQ PDR EP + GE++++++F LL
Sbjct: 179 -PSIKMQMDIFHWQIMDGNLTHNIRRYLPMTGHIQIAQVPDRHEPDSPGELNFSFIFRLL 237
Query: 240 AREGYEGYVGLEYKPQGNTKEGLEEFLKTF 269
Y+G++G EYKPQG+T+ GLE K +
Sbjct: 238 EELDYQGFIGCEYKPQGSTEAGLEWLRKYW 267
>sp|P36951|HYI_DROME Putative hydroxypyruvate isomerase OS=Drosophila melanogaster
GN=Gip PE=1 SV=1
Length = 264
Score = 163 bits (412), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 148/264 (56%), Gaps = 17/264 (6%)
Query: 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQV 64
+ K AANL LF + A + ++ R+A + GFR +E +P G T +V+A G+
Sbjct: 2 ALKFAANLNFLFTERATSIAERIRLAHQNGFRAVEIPYPE-GET-SDVVSAVKETGVVVS 59
Query: 65 LINTEVDEN-----FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQP 119
L+N D++ FG +V G E FR+ L+ TI +A +N IH+ +G + +
Sbjct: 60 LVNLAFDKSDDQLRFGSTSVPGSEKLFRSQLDATIDFARQVNCGKIHLTAGLFKGGQ--- 116
Query: 120 IASEDPYT-TLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178
E YT T NL A L + +IEP+N+++VPGYY++S+ A ++ ++ A
Sbjct: 117 ---ESDYTKTYTANLKIAADSLRASKMIGVIEPINKYAVPGYYMNSYSKAAGILADVAA- 172
Query: 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFEL 238
N+QL D ++ Q + G+++ T + LIGH QIAQ P R EP GE+DY +VF+
Sbjct: 173 --DNIQLLADLYHLQHLHGNVSKTLEEYKALIGHFQIAQVPHRHEPDVSGELDYGFVFKA 230
Query: 239 LAREGYEGYVGLEYKPQGNTKEGL 262
L GY+G++G EYKP+ T EGL
Sbjct: 231 LQEFGYDGWIGCEYKPKTTTVEGL 254
>sp|P30147|HYI_ECOLI Hydroxypyruvate isomerase OS=Escherichia coli (strain K12) GN=hyi
PE=1 SV=1
Length = 258
Score = 161 bits (407), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 148/261 (56%), Gaps = 15/261 (5%)
Query: 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVL 65
+ +ANL++LF + ++L ++ AA+ GFR +E FP +E+L + L+ L
Sbjct: 2 LRFSANLSMLFGEY--DFLARFEKAAQCGFRGVEFMFP-YDYDIEELKHVLASNKLEHTL 58
Query: 66 INTEVDE----NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIA 121
N + G A + G+E EFR + I+YA AL I+ + GKT + +
Sbjct: 59 HNLPAGDWAAGERGIACIPGREEEFRDGVAAAIRYARALGNKKINCLVGKTPAG----FS 114
Query: 122 SEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS 181
SE + TL ENL YA L + + LIEP+N +PG++L+ R A +LI ++ G
Sbjct: 115 SEQIHATLVENLRYAANMLMKEDILLLIEPINHFDIPGFHLTGTRQALKLIDDV---GCC 171
Query: 182 NVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAR 241
N+++Q+D ++ QR+ G+LT+T D IGH+QIA P R EP GEI+Y Y+F+++
Sbjct: 172 NLKIQYDIYHMQRMEGELTNTMTQWADKIGHLQIADNPHRGEP-GTGEINYDYLFKVIEN 230
Query: 242 EGYEGYVGLEYKPQGNTKEGL 262
Y G+VG EYKPQ T+ GL
Sbjct: 231 SDYNGWVGCEYKPQTTTEAGL 251
>sp|Q5T013|HYI_HUMAN Putative hydroxypyruvate isomerase OS=Homo sapiens GN=HYI PE=1 SV=2
Length = 277
Score = 160 bits (406), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 12/273 (4%)
Query: 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQV 64
+ +ANL+ LF +L+ + R A GF +E +W P T E L A GL+ V
Sbjct: 4 LRFSANLSWLFPELSG-LPARVRAAGSSGFEAVEVAW--PYAETPEALARAAREAGLRLV 60
Query: 65 LINTEVDEN----FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPI 120
LINT + G AV G+++ FR LE+ ++YA AL P IH+M+G+ +
Sbjct: 61 LINTPPGDQEKGEMGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRIA 120
Query: 121 ASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-SVPGYYLSSFRVAERLIRELRAHG 179
+ ENL +A L + L L+EP+N + P Y+L + + A +++++ G
Sbjct: 121 VKAEMEAVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKV---G 177
Query: 180 ISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELL 239
N+QLQ D F+ Q + G+LT ++GHVQ+AQ P R EP + GE+++ Y+F+LL
Sbjct: 178 RPNLQLQMDIFHWQIMDGNLTGNIREFLPIVGHVQVAQVPGRGEPSSPGELNFPYLFQLL 237
Query: 240 AREGYEGYVGLEYKPQGNTKEGLEEFLKTFDLK 272
EGY+G+VG EY+P+G+T EGL +D +
Sbjct: 238 EDEGYKGFVGCEYQPRGDTVEGLSWLRSYWDRR 270
>sp|Q6NUD4|HYI_XENLA Putative hydroxypyruvate isomerase OS=Xenopus laevis GN=hyi PE=2
SV=2
Length = 275
Score = 157 bits (397), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/275 (35%), Positives = 154/275 (56%), Gaps = 17/275 (6%)
Query: 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQV 64
+ +AN++ LF ++ ++ + + A++ GFR +E +W P AA H + V
Sbjct: 1 MRFSANISWLFPEVP-DFPGRIKAASQSGFRAVEVAW--PYATDRTLFKAALNTHRMSLV 57
Query: 65 LINT-----EVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQP 119
L+NT E E G AAV G++ EFR L + + +A L IHIM+G+ +
Sbjct: 58 LLNTPPGNIEAGE-LGLAAVPGRQDEFRTGLNEAVSWASDLGCDRIHIMAGRVPLGLERQ 116
Query: 120 IASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-SVPGYYLSSFRVAERLIRELRAH 178
++ T ENL YA L + + L+EP+N + P Y+L++ + A ++ +++
Sbjct: 117 FIEKEMEETFIENLQYAADILGQAGMVGLLEPINSLITEPRYFLNTPQHAASILHKVKR- 175
Query: 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFEL 238
N++LQ D ++ Q + G+LT LIGHVQIAQ P R EP + GE+++ Y+F+L
Sbjct: 176 --PNLKLQMDLYHWQIMGGNLTQNIKTYFPLIGHVQIAQIPHRNEPDSPGELNFMYLFDL 233
Query: 239 LAREGYEGYVGLEYKPQGNTKEGL---EEFLKTFD 270
L GY+GYVG EYKPQG+T +GL E++LK D
Sbjct: 234 LQDLGYQGYVGCEYKPQGDTVKGLGWMEKYLKNCD 268
>sp|Q57151|Y1013_HAEIN Putative hydroxypyruvate isomerase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1013
PE=3 SV=1
Length = 258
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 145/269 (53%), Gaps = 23/269 (8%)
Query: 7 KLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLI 66
K AANLT++FN++ +LD++ AA+ GF+Y+E +P ++L A +HGLK VL
Sbjct: 3 KFAANLTMMFNEVP--FLDRFEAAAKAGFKYVEFLWP-YDYPAQELKAILDKHGLKVVLF 59
Query: 67 NTEVDE----NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIAS 122
NT + +G +A+ G+E++ ++ ++YA AL P +HIMS ++
Sbjct: 60 NTPAGDVNKGEWGGSAIPGREADSHRDIDLALEYALALGCPNVHIMSAVVPEGASR---- 115
Query: 123 EDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSS----FRVAERLIRELRAH 178
E+ T +N+ YA + + + + +E ++ P Y L S V E + R+
Sbjct: 116 EEYKQTFIKNVRYASDKYKPYGIKIQLEALSPEVKPNYLLKSQFDTLEVVELVDRD---- 171
Query: 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFEL 238
NV +Q D+F+AQ + G+L HVQIA PDR EP GEI+Y Y+F+
Sbjct: 172 ---NVFVQLDYFHAQNVDGNLARLTDKLNGKFAHVQIASVPDRHEPD-EGEINYQYIFDK 227
Query: 239 LAREGYEGYVGLEYKPQGNTKEGLEEFLK 267
L GY GYVG EYKP+G T GL+ F K
Sbjct: 228 LDEIGYTGYVGCEYKPRGETVTGLDWFQK 256
>sp|Q11185|HYI_CAEEL Putative hydroxypyruvate isomerase OS=Caenorhabditis elegans
GN=C05D11.5 PE=3 SV=1
Length = 262
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 147/263 (55%), Gaps = 17/263 (6%)
Query: 7 KLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLI 66
++AANL +LF +L L +Y AA GF+ +E P E+L A + LK LI
Sbjct: 6 RVAANLNMLFTNLP--LLQRYGAAASAGFKLVEVSIP-YTEPAEKLREAADEYHLKHTLI 62
Query: 67 NT---EVDENF-GYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIAS 122
N D+ F G A++K + EFR SL+ I+YA AL +H+M+G +S
Sbjct: 63 NAPPGNWDDGFRGLASLKSAKKEFRKSLDTAIEYAKALGCCRVHVMAGIPKSDDDL---- 118
Query: 123 EDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN 182
E+ + T EN+ +A + + H L LIEP+N++++PGY+L+++ A +I+ ++ +N
Sbjct: 119 ENAHQTYSENVRFAAEKFKEHKLICLIEPINKYTIPGYHLNNYEDAMDVIQMDQS---NN 175
Query: 183 VQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLARE 242
+++Q+D F+AQ+I G + +D IG++Q+AQ P+R RGEIDY ++F+ +
Sbjct: 176 LKIQYDTFHAQQINGQIGAIMRKLKDYIGYIQVAQVPNRGACDTRGEIDYHFIFDEIRSI 235
Query: 243 GYEGYVGLEY---KPQGNTKEGL 262
+G EY KP N E +
Sbjct: 236 NPSWVIGAEYLDAKPSFNWIENM 258
>sp|Q46891|YGBM_ECOLI Putative hydroxypyruvate isomerase YgbM OS=Escherichia coli (strain
K12) GN=ygbM PE=1 SV=1
Length = 258
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 139/266 (52%), Gaps = 21/266 (7%)
Query: 7 KLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLI 66
+ AANL+++F ++ +++++ A + GF +E FP TL+ + H L L
Sbjct: 3 RFAANLSMMFTEVP--FIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNH-LTLALF 59
Query: 67 NTEVDE----NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIAS 122
NT + +G +A+ G+E E A ++ ++YA ALN +H+M+G + +
Sbjct: 60 NTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGED----A 115
Query: 123 EDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN 182
E +N+ YA H L+E ++ P Y SS A ++ E+ N
Sbjct: 116 ERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEV---ARDN 172
Query: 183 VQLQFDFFNAQRICGDLTHTFGACRDLIG---HVQIAQAPDRQEPHARGEIDYAYVFELL 239
V +Q D F+AQ++ G+LTH RD G HVQIA PDR EP GEI+Y ++F L
Sbjct: 173 VFIQLDTFHAQKVDGNLTHL---IRDYAGKYAHVQIAGLPDRHEPD-DGEINYPWLFRLF 228
Query: 240 AREGYEGYVGLEYKPQGNTKEGLEEF 265
GY+G++G EYKP+G T+EGL F
Sbjct: 229 DEVGYQGWIGCEYKPRGLTEEGLGWF 254
>sp|Q44015|YGB4_CUPNE Putative hydroxypyruvate isomerase OS=Cupriavidus necator PE=3 SV=1
Length = 260
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 145/271 (53%), Gaps = 24/271 (8%)
Query: 7 KLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLI 66
+ AANL++++N+ A A R +E FP E L A +GL Q L
Sbjct: 3 RFAANLSMMYNEHAFLDRFAAAAADGF--RAVEFLFPYEHAAAE-LRARLDANGLTQALF 59
Query: 67 NTEVDE----NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSG--KTESSRTQPI 120
N + G AA+ G+E++FR ++ + ++YA + IH+M+G ++ R +
Sbjct: 60 NAAPGDWAAGERGLAALPGREADFRGTIGRALEYAGVIGNDRIHVMAGLIPADADRARCR 119
Query: 121 ASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGI 180
A T ENL +A +T LIEP+N +PGY+L+ + + +E+ G
Sbjct: 120 A------TYLENLAFAANAAAAQGVTVLIEPINTRDMPGYFLNRQDDGQAICKEV---GA 170
Query: 181 SNVQLQFDFFNAQRICGDLTHTFGACRDL--IGHVQIAQAPDRQEPHARGEIDYAYVFEL 238
+N+++QFD ++ Q + GD+ RD+ IGH+QIA P+R EP GE++Y Y+FE+
Sbjct: 171 ANLKVQFDCYHCQIVEGDVAMKLK--RDIAGIGHIQIAGVPERHEPDV-GELNYPYLFEV 227
Query: 239 LAREGYEGYVGLEYKPQGNTKEGLEEFLKTF 269
+ GY+G++G EY+P+ T GL +LK +
Sbjct: 228 MDTLGYDGWIGCEYRPRAGTSAGL-GWLKPY 257
>sp|Q9Z596|Y6206_STRCO Putative hydroxypyruvate isomerase OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO6206 PE=3
SV=1
Length = 279
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 19/256 (7%)
Query: 11 NLTLLFNDLAANYLDKYRVAAELGFRYIESWFP------PVGVTLEQLVAAQTRHGLKQV 64
NL++LF +L L++ AA GF +E W+P P L+ L +A G++
Sbjct: 11 NLSILFTELP--LLERPAAAAAAGFTAVELWWPWIDSPTPEQSELDALKSAIEDAGVQLT 68
Query: 65 LINTEVDE----NFGYAAVKGKESE-FRASLEKTIQYACALNIPAIHIMSGKTESSRTQP 119
+N + + G ++ G+ESE FRA+++ +A +L A++ + G +R +
Sbjct: 69 GLNFYAGQLPGPDRGALSIPGEESERFRANIDVAADFARSLGCTALNALYG----NRVEG 124
Query: 120 IASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI-RELRAH 178
+ + ENL+ A +R L+E +N+ P Y L S A ++ R A
Sbjct: 125 VDPAEQDRLALENLVLAARAADRIGAVLLVEALNKPESPRYPLVSAPAAIAVVDRVNEAT 184
Query: 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFEL 238
G+ N + D ++ DL A GHVQIA P R P G + + +
Sbjct: 185 GLGNAKFLMDLYHLSMNGEDLPQVIDAYAAKTGHVQIADNPGRGAP-GTGSLPLEDLLDR 243
Query: 239 LAREGYEGYVGLEYKP 254
LA+ GY+G+VGLEYKP
Sbjct: 244 LAKAGYDGWVGLEYKP 259
>sp|P76044|YCJR_ECOLI Uncharacterized protein YcjR OS=Escherichia coli (strain K12)
GN=ycjR PE=3 SV=2
Length = 262
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 23/237 (9%)
Query: 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKG 81
N L+K+R E+GF E + +E++ AA GL + T GY G
Sbjct: 14 NILEKFRYIKEMGFDGFEIDGKLLVNNIEEVKAAIKETGLP---VTTACG---GYDGWIG 67
Query: 82 KESEFR-----ASLEKTIQYACALN-----IPAIHIMSGKTESSRTQPIASEDPYTTLKE 131
E R +E+ ++ + +PA M T P + + + +
Sbjct: 68 DFIEERRLNGLKQIERILEALAEVGGKGIVVPAAWGMFTFRLPPMTSPRSLDGDRKMVSD 127
Query: 132 NLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFN 191
+L R +EP+N++ + +++ A R I E + + +VQ+ DF++
Sbjct: 128 SLRVLEQVAARTGTVVYLEPLNRYQ--DHMINTLADARRYIVE---NDLKHVQIIGDFYH 182
Query: 192 AQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYV 248
+L RDL+GHV IA R +P G +D+ +FE L + Y+GYV
Sbjct: 183 MNIEEDNLAQALHDNRDLLGHVHIADN-HRYQP-GSGTLDFHALFEQLRADNYQGYV 237
>sp|A4VQZ7|LIPB_PSEU5 Octanoyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=lipB
PE=3 SV=1
Length = 219
Score = 38.5 bits (88), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 149 IEPVNQHSVPGYYLSSFRVAER--LIRELRA-HGIS-NVQLQFDFFNAQRICGDLTHTFG 204
+E V + PG Y+ ++A IR R+ HG++ NV + + F CG
Sbjct: 118 VEAVAKPDAPGVYVGGAKIASLGLRIRNGRSFHGLALNVDMDLEPFRRINPCGYAGLPMT 177
Query: 205 ACRDLIGHVQIAQAPDRQEPHARGEIDYA 233
RDLIG + I++ DR H ++ YA
Sbjct: 178 QLRDLIGPIDISEVADRLRDHLVRQLGYA 206
>sp|C1CPE5|EFG_STRZT Elongation factor G OS=Streptococcus pneumoniae (strain
Taiwan19F-14) GN=fusA PE=3 SV=1
Length = 693
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B2ISJ9|EFG_STRPS Elongation factor G OS=Streptococcus pneumoniae (strain CGSP14)
GN=fusA PE=3 SV=1
Length = 693
Score = 38.1 bits (87), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|C1CC62|EFG_STRZJ Elongation factor G OS=Streptococcus pneumoniae (strain JJA)
GN=fusA PE=3 SV=1
Length = 693
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|C1CIF3|EFG_STRZP Elongation factor G OS=Streptococcus pneumoniae (strain P1031)
GN=fusA PE=3 SV=1
Length = 693
Score = 38.1 bits (87), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLVEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B8ZKU0|EFG_STRPJ Elongation factor G OS=Streptococcus pneumoniae (strain ATCC 700669
/ Spain 23F-1) GN=fusA PE=3 SV=1
Length = 693
Score = 37.7 bits (86), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLVEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B1I8Z9|EFG_STRPI Elongation factor G OS=Streptococcus pneumoniae (strain
Hungary19A-6) GN=fusA PE=3 SV=1
Length = 693
Score = 36.6 bits (83), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR +L +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLVEAVAETDEDLMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|P64023|EFG_STRR6 Elongation factor G OS=Streptococcus pneumoniae (strain ATCC
BAA-255 / R6) GN=fusA PE=3 SV=1
Length = 693
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ +P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEEIRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|P64022|EFG_STRPN Elongation factor G OS=Streptococcus pneumoniae serotype 4 (strain
ATCC BAA-334 / TIGR4) GN=fusA PE=3 SV=1
Length = 693
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ +P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEEIRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|C1CB46|EFG_STRP7 Elongation factor G OS=Streptococcus pneumoniae (strain 70585)
GN=fusA PE=3 SV=1
Length = 693
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ +P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEEIRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B5E6U5|EFG_STRP4 Elongation factor G OS=Streptococcus pneumoniae serotype 19F
(strain G54) GN=fusA PE=3 SV=1
Length = 693
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ +P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEEIRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|Q04MH7|EFG_STRP2 Elongation factor G OS=Streptococcus pneumoniae serotype 2 (strain
D39 / NCTC 7466) GN=fusA PE=3 SV=1
Length = 693
Score = 36.2 bits (82), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YLD+ YR EL +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLDQAQEYREKLIEAVAETDEELMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T++ +P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDAEEIRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B9DVS2|EFG_STRU0 Elongation factor G OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=fusA PE=3 SV=1
Length = 692
Score = 34.7 bits (78), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 24/125 (19%)
Query: 18 DLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVL 65
D+ A Y+D+ YR EL +Y+E +T E+L+A G+++
Sbjct: 198 DIPAEYVDQANEYREKLVEAVAETDEELMMKYLEGE----EITNEELMA-----GIRKAT 248
Query: 66 INTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPIASED 124
IN E +A K K + L+ I Y L+IPAI ++ T++ T+P + E+
Sbjct: 249 INVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGVNPDTDAEETRPASDEE 306
Query: 125 PYTTL 129
P+ L
Sbjct: 307 PFAAL 311
>sp|A8AUR6|EFG_STRGC Elongation factor G OS=Streptococcus gordonii (strain Challis /
ATCC 35105 / CH1 / DL1 / V288) GN=fusA PE=3 SV=1
Length = 693
Score = 34.3 bits (77), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YL++ YR +L +Y+E E++ + + G+
Sbjct: 194 ILEEDIPAEYLEQAQEYREKLVEAVAETDEDLMMKYLEG---------EEITNEELKAGI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|Q8DXS7|EFG_STRA5 Elongation factor G OS=Streptococcus agalactiae serotype V (strain
ATCC BAA-611 / 2603 V/R) GN=fusA PE=3 SV=1
Length = 692
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A Y+D+ YR +L +Y+E +T E+L+AA +
Sbjct: 194 ILEEDIPAEYVDQANEYREKLVEAVADTDEDLMMKYLEGE----EITNEELMAA-----I 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RKATINVEFYPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|Q3JZB5|EFG_STRA1 Elongation factor G OS=Streptococcus agalactiae serotype Ia (strain
ATCC 27591 / A909 / CDC SS700) GN=fusA PE=3 SV=1
Length = 692
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A Y+D+ YR +L +Y+E +T E+L+AA +
Sbjct: 194 ILEEDIPAEYVDQANEYREKLVEAVADTDEDLMMKYLEGE----EITNEELMAA-----I 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RKATINVEFYPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|Q8E3E7|EFG_STRA3 Elongation factor G OS=Streptococcus agalactiae serotype III
(strain NEM316) GN=fusA PE=3 SV=1
Length = 692
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A Y+D+ YR +L +Y+E +T E+L+AA +
Sbjct: 194 ILEEDIPAEYVDQANEYREKLVEAVADTDEDLMMKYLEGE----EITNEELMAA-----I 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ T+ T+P
Sbjct: 245 RRATINVEFYPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTDEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|A3CQM2|EFG_STRSV Elongation factor G OS=Streptococcus sanguinis (strain SK36)
GN=fusA PE=3 SV=1
Length = 693
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A YL++ YR +L +Y+E E++ + + +
Sbjct: 194 ILEEDIPAEYLEQAQEYREKLVEAVAETDEDLMMKYLEG---------EEITNEELKAAI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ I Y L+IPAI ++ TE T+P
Sbjct: 245 RKATINVEFFPVLCGSAFKNKGVQLM--LDAVIDYLPSPLDIPAIKGINPDTEEEETRPA 302
Query: 121 ASEDPYTTL 129
+ E+P+ L
Sbjct: 303 SDEEPFAAL 311
>sp|B0G138|PKS21_DICDI Probable polyketide synthase 21 OS=Dictyostelium discoideum GN=pks21
PE=3 SV=1
Length = 2779
Score = 33.1 bits (74), Expect = 2.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 137 CAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQ 186
C E + ++ IE +N ++PG Y+ S V E L+RE+ GI ++ ++
Sbjct: 2560 CKEFDEETVIPTIENIN--NLPGGYMKSKVVVENLLREVAKRGIPSMLIR 2607
>sp|Q6A9H8|OBG_PROAC GTPase obg OS=Propionibacterium acnes (strain KPA171202 / DSM
16379) GN=obg PE=3 SV=1
Length = 505
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 45 VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLE-KTIQYACALNIP 103
VGV E +VAA R GL + + G+A + E + LE K + + P
Sbjct: 112 VGVGAELVVAAGGRGGLGNAALANSARKAPGFALLGEAGEERKILLELKVVADIGLVGFP 171
Query: 104 AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACA 138
+ S SR +P ++ P+TTL NL A
Sbjct: 172 SAGKSSLIAAISRAKPKIADYPFTTLVPNLGVVVA 206
>sp|Q8P608|CYSI_XANCP Sulfite reductase [NADPH] hemoprotein beta-component OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=cysI PE=3 SV=1
Length = 568
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 160 YYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAP 219
Y S R+ R + + HG+ +L+ Q I L T AC D+ +VQ+A P
Sbjct: 93 YANHSLRITTR--QAFQFHGVIKRELKATM---QAINATLIDTLAACGDVNRNVQVAANP 147
Query: 220 DRQEPHARGEIDYAYVFELL 239
R + HA D A V E L
Sbjct: 148 LRSQAHATLYADAARVSEHL 167
>sp|Q8DVV4|EFG_STRMU Elongation factor G OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=fusA PE=3 SV=1
Length = 693
Score = 32.0 bits (71), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 24/129 (18%)
Query: 14 LLFNDLAANYLDK---YR---------VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
+L D+ A+YLD+ YR +L +Y+E E++ + + +
Sbjct: 194 ILIEDIPADYLDQAKEYREKLIEAVAETDEDLMMKYLEG---------EEITETELKAAI 244
Query: 62 KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAIHIMSGKTESSRTQPI 120
++ IN E +A K K + L+ + Y L+IP I ++ T+ +P
Sbjct: 245 RKATINVEFFPVLAGSAFKNKGVQMM--LDAVVDYLPSPLDIPPIKGVNPDTDEEEERPA 302
Query: 121 ASEDPYTTL 129
+ ++P+ L
Sbjct: 303 SDDEPFAAL 311
>sp|O57774|DTDA_PYRHO D-tyrosyl-tRNA(Tyr) deacylase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=dtdA PE=1 SV=1
Length = 274
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 4 PSFKLAANLTLLFND--LAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL 61
P +K L L ND + +YLD+ + +LGF+ +++A +RH
Sbjct: 37 PVYKRGDVLILTTNDEMIYYDYLDR-EIENQLGFK-------------PEIIAFASRHSS 82
Query: 62 KQVL--INTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98
KQ L + T V N+G A GK+ F ++ ++ +
Sbjct: 83 KQKLPALTTHVTGNWGKAMYGGKDESFAVAIPSAMKLSL 121
>sp|B4U0V9|EFG_STREM Elongation factor G OS=Streptococcus equi subsp. zooepidemicus
(strain MGCS10565) GN=fusA PE=3 SV=1
Length = 692
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAI 105
+T E+LVA G+++ IN E +A K K + L+ I Y L+IPAI
Sbjct: 235 ITNEELVA-----GIRKATINVEFFPVLCGSAFKNKGVQLM--LDAVIAYLPSPLDIPAI 287
Query: 106 HIMSGKTESSRTQPIASEDPYTTL 129
++ T++ +P + E+P+ L
Sbjct: 288 KGVNPDTDAEEERPASDEEPFAAL 311
>sp|C0MF25|EFG_STRS7 Elongation factor G OS=Streptococcus equi subsp. zooepidemicus
(strain H70) GN=fusA PE=3 SV=1
Length = 692
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAI 105
+T E+LVA G+++ IN E +A K K + L+ I Y L+IPAI
Sbjct: 235 ITNEELVA-----GIRKATINVEFFPVLCGSAFKNKGVQLM--LDAVIAYLPSPLDIPAI 287
Query: 106 HIMSGKTESSRTQPIASEDPYTTL 129
++ T++ +P + E+P+ L
Sbjct: 288 KGVNPDTDAEEERPASDEEPFAAL 311
>sp|C0M937|EFG_STRE4 Elongation factor G OS=Streptococcus equi subsp. equi (strain 4047)
GN=fusA PE=3 SV=1
Length = 692
Score = 31.6 bits (70), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY-ACALNIPAI 105
+T E+LVA G+++ IN E +A K K + L+ I Y L+IPAI
Sbjct: 235 ITNEELVA-----GIRKATINVEFFPVLCGSAFKNKGVQLM--LDAVIAYLPSPLDIPAI 287
Query: 106 HIMSGKTESSRTQPIASEDPYTTL 129
++ T++ +P + E+P+ L
Sbjct: 288 KGVNPDTDAEEERPASDEEPFAAL 311
>sp|Q9WYP7|Y416_THEMA Uncharacterized protein TM_0416 OS=Thermotoga maritima (strain ATCC
43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_0416 PE=1
SV=1
Length = 270
Score = 31.2 bits (69), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 139 ELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGD 198
EL H+ +IEP+N++ ++++ A R++R++ ++ V + D F+ +
Sbjct: 139 ELTEHA-KFVIEPLNRYETD--FINTIDDALRILRKINSN---RVGILADTFHMNIEEVN 192
Query: 199 LTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYKP-QGN 257
+ + + + H +A + +R P G D+ VF L GY YV +E P G
Sbjct: 193 IPESLKRAGEKLYHFHVADS-NRWAPGC-GHFDFRSVFNTLKEIGYNRYVSVECLPLPGG 250
Query: 258 TKEGLEEFLKTF 269
+E E KT
Sbjct: 251 MEEAAEIAFKTL 262
>sp|B8HXN3|PNP_CYAP4 Polyribonucleotide nucleotidyltransferase OS=Cyanothece sp. (strain
PCC 7425 / ATCC 29141) GN=pnp PE=3 SV=1
Length = 715
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 32 ELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLE 91
ELG ++ PP TLE + + +K++L E D+N AA+ E +A++E
Sbjct: 223 ELGIALVQQDPPPRDPTLENFIRERAEAPVKEILARFEKDKNVRDAAL----DEVKAAIE 278
Query: 92 KTIQ 95
+ I+
Sbjct: 279 QAIK 282
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,892,849
Number of Sequences: 539616
Number of extensions: 4118567
Number of successful extensions: 10088
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 10041
Number of HSP's gapped (non-prelim): 44
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)