Query psy13372
Match_columns 273
No_of_seqs 117 out of 1102
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 17:48:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13372.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13372hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ngf_A AP endonuclease, family 100.0 2.6E-46 9E-51 319.4 27.0 252 5-269 9-264 (269)
2 1k77_A EC1530, hypothetical pr 100.0 3.1E-46 1.1E-50 316.9 26.6 254 5-270 1-258 (260)
3 3kws_A Putative sugar isomeras 100.0 4.4E-42 1.5E-46 295.8 27.2 253 5-269 25-283 (287)
4 3vni_A Xylose isomerase domain 100.0 2.2E-40 7.4E-45 285.9 24.9 241 6-255 2-249 (294)
5 3qc0_A Sugar isomerase; TIM ba 100.0 8.8E-41 3E-45 285.3 22.1 252 3-269 2-274 (275)
6 2qul_A D-tagatose 3-epimerase; 100.0 1.1E-39 3.9E-44 280.6 26.1 238 5-255 1-250 (290)
7 1i60_A IOLI protein; beta barr 100.0 1.3E-39 4.6E-44 278.3 24.9 247 6-269 1-271 (278)
8 3u0h_A Xylose isomerase domain 100.0 1.9E-39 6.5E-44 277.9 22.1 249 4-269 2-275 (281)
9 2hk0_A D-psicose 3-epimerase; 100.0 2.4E-38 8.1E-43 275.3 26.0 237 6-255 21-268 (309)
10 3obe_A Sugar phosphate isomera 100.0 1.3E-38 4.3E-43 276.7 23.9 248 4-272 19-304 (305)
11 3dx5_A Uncharacterized protein 100.0 3.6E-39 1.2E-43 277.2 19.6 243 6-272 1-276 (286)
12 3cqj_A L-ribulose-5-phosphate 100.0 1.4E-38 4.9E-43 274.8 23.4 248 5-269 16-285 (295)
13 3l23_A Sugar phosphate isomera 100.0 2.5E-38 8.7E-43 274.6 23.9 248 4-271 11-301 (303)
14 3qxb_A Putative xylose isomera 100.0 1.2E-38 4.1E-43 278.1 21.9 257 4-269 18-312 (316)
15 2zvr_A Uncharacterized protein 100.0 2E-38 6.7E-43 273.4 22.9 250 4-270 19-286 (290)
16 3aal_A Probable endonuclease 4 100.0 6.5E-38 2.2E-42 271.9 21.7 250 4-271 4-290 (303)
17 3cny_A Inositol catabolism pro 100.0 3.9E-38 1.3E-42 272.5 19.8 245 6-269 10-297 (301)
18 2qw5_A Xylose isomerase-like T 100.0 5.4E-37 1.8E-41 269.7 26.4 241 4-255 7-285 (335)
19 3tva_A Xylose isomerase domain 100.0 2.2E-37 7.5E-42 266.7 23.2 241 3-269 8-283 (290)
20 2q02_A Putative cytoplasmic pr 100.0 5.5E-37 1.9E-41 261.5 21.4 224 1-253 2-247 (272)
21 1qtw_A Endonuclease IV; DNA re 100.0 2.7E-37 9.1E-42 265.2 19.0 246 5-269 1-278 (285)
22 2g0w_A LMO2234 protein; putati 100.0 2.4E-36 8.3E-41 261.2 23.6 234 6-269 23-285 (296)
23 2zds_A Putative DNA-binding pr 100.0 2.4E-36 8E-41 265.7 21.5 252 6-270 3-318 (340)
24 3lmz_A Putative sugar isomeras 100.0 3.5E-36 1.2E-40 255.0 18.3 221 5-269 17-253 (257)
25 3aam_A Endonuclease IV, endoiv 100.0 8.4E-36 2.9E-40 254.3 19.1 237 5-270 1-267 (270)
26 2x7v_A Probable endonuclease 4 100.0 1.7E-36 5.8E-41 260.4 14.9 245 5-269 1-278 (287)
27 1xla_A D-xylose isomerase; iso 100.0 2.9E-35 1E-39 264.0 21.9 250 2-256 4-297 (394)
28 3ktc_A Xylose isomerase; putat 100.0 6.8E-35 2.3E-39 256.2 23.7 257 6-269 8-293 (333)
29 1muw_A Xylose isomerase; atomi 100.0 1.9E-35 6.5E-40 264.6 19.6 249 2-255 4-290 (386)
30 3p6l_A Sugar phosphate isomera 100.0 3.7E-35 1.3E-39 249.2 19.6 221 4-269 8-257 (262)
31 1bxb_A Xylose isomerase; xylos 100.0 1.2E-34 4.2E-39 259.4 22.7 249 2-255 4-290 (387)
32 1xim_A D-xylose isomerase; iso 100.0 1E-33 3.5E-38 253.9 21.9 247 3-255 5-295 (393)
33 1a0c_A Xylose isomerase; ketol 100.0 2.6E-31 8.7E-36 239.6 22.9 230 23-257 82-344 (438)
34 1yx1_A Hypothetical protein PA 100.0 3.8E-33 1.3E-37 237.2 10.2 227 6-271 6-254 (264)
35 3bdk_A D-mannonate dehydratase 100.0 3.9E-30 1.3E-34 227.9 20.0 238 24-268 33-359 (386)
36 1tz9_A Mannonate dehydratase; 100.0 2.4E-30 8.1E-35 230.1 18.8 242 22-269 22-356 (367)
37 3ayv_A Putative uncharacterize 100.0 2.4E-30 8.1E-35 218.6 16.3 219 22-269 11-238 (254)
38 3m0m_A L-rhamnose isomerase; b 99.9 8E-22 2.7E-26 176.5 25.5 228 21-259 76-336 (438)
39 2j6v_A UV endonuclease, UVDE; 99.8 2.4E-20 8.1E-25 160.7 14.1 205 21-256 61-295 (301)
40 3p14_A L-rhamnose isomerase; T 99.4 2.3E-11 8E-16 106.5 20.3 221 19-254 72-334 (424)
41 3tc3_A UV damage endonuclease; 98.9 1.4E-06 4.6E-11 74.1 23.0 208 21-253 60-290 (310)
42 1d8w_A L-rhamnose isomerase; b 98.3 6.4E-05 2.2E-09 64.9 16.9 218 20-253 76-335 (426)
43 3bww_A Protein of unknown func 98.0 2.4E-05 8.3E-10 66.0 9.0 175 24-218 16-208 (307)
44 1ydn_A Hydroxymethylglutaryl-C 97.6 0.0059 2E-07 51.8 17.6 200 22-246 24-264 (295)
45 2ftp_A Hydroxymethylglutaryl-C 97.5 0.013 4.6E-07 49.8 18.9 196 24-246 33-268 (302)
46 2cw6_A Hydroxymethylglutaryl-C 97.5 0.0033 1.1E-07 53.5 14.8 199 22-245 25-264 (298)
47 3ewb_X 2-isopropylmalate synth 97.3 0.0086 2.9E-07 50.8 14.7 195 22-241 25-251 (293)
48 1ydo_A HMG-COA lyase; TIM-barr 97.3 0.016 5.5E-07 49.4 16.4 198 22-246 26-266 (307)
49 2nx9_A Oxaloacetate decarboxyl 97.2 0.038 1.3E-06 49.8 19.0 193 23-246 32-260 (464)
50 1m5w_A Pyridoxal phosphate bio 97.0 0.0049 1.7E-07 49.9 9.8 52 92-148 139-190 (243)
51 1rqb_A Transcarboxylase 5S sub 96.9 0.078 2.7E-06 48.6 18.1 193 22-245 48-278 (539)
52 3eeg_A 2-isopropylmalate synth 96.9 0.012 4.3E-07 50.5 12.2 192 22-241 29-252 (325)
53 3gk0_A PNP synthase, pyridoxin 96.9 0.023 8E-07 46.8 12.8 141 3-148 29-218 (278)
54 3rmj_A 2-isopropylmalate synth 96.8 0.039 1.3E-06 48.3 14.5 195 22-241 32-258 (370)
55 3ble_A Citramalate synthase fr 96.7 0.048 1.6E-06 47.1 14.6 198 22-245 39-272 (337)
56 3ivs_A Homocitrate synthase, m 96.6 0.12 4E-06 46.0 16.5 190 22-241 59-277 (423)
57 3hq1_A 2-isopropylmalate synth 96.5 0.063 2.1E-06 50.1 14.5 202 22-245 91-337 (644)
58 2ztj_A Homocitrate synthase; ( 96.4 0.34 1.2E-05 42.5 17.9 189 24-242 28-244 (382)
59 1nvm_A HOA, 4-hydroxy-2-oxoval 96.3 0.16 5.4E-06 44.0 15.3 183 22-246 28-253 (345)
60 1qwg_A PSL synthase;, (2R)-pho 96.1 0.087 3E-06 43.1 11.5 140 21-192 85-233 (251)
61 1aj0_A DHPS, dihydropteroate s 95.0 0.74 2.5E-05 38.5 13.9 82 91-179 123-208 (282)
62 3tr9_A Dihydropteroate synthas 94.9 1 3.6E-05 38.2 14.5 91 92-187 139-233 (314)
63 3ipw_A Hydrolase TATD family p 94.9 0.28 9.5E-06 42.0 11.1 139 20-185 51-196 (325)
64 2dqw_A Dihydropteroate synthas 94.9 1.3 4.3E-05 37.3 14.9 94 91-191 136-232 (294)
65 1x7f_A Outer surface protein; 94.7 1.1 3.9E-05 39.0 14.6 206 7-263 28-263 (385)
66 2d73_A Alpha-glucosidase SUSB; 94.7 0.72 2.5E-05 43.6 14.0 113 22-150 372-507 (738)
67 2ekg_A Proline dehydrogenase/d 94.2 2 6.8E-05 36.7 14.8 119 51-190 66-185 (327)
68 1tx2_A DHPS, dihydropteroate s 94.0 2.3 7.7E-05 35.8 14.6 74 92-178 150-226 (297)
69 4h6q_A Proline dehydrogenase; 93.7 1.2 4.2E-05 37.7 12.5 120 54-191 50-171 (312)
70 2y5s_A DHPS, dihydropteroate s 93.6 2.8 9.6E-05 35.2 14.7 82 92-179 131-217 (294)
71 3tc3_A UV damage endonuclease; 93.6 1.5 5.2E-05 37.0 12.8 67 84-151 56-122 (310)
72 3bg3_A Pyruvate carboxylase, m 93.6 5.1 0.00017 38.0 20.2 137 91-245 200-363 (718)
73 3qja_A IGPS, indole-3-glycerol 93.6 2.7 9.3E-05 34.9 16.0 184 22-267 73-259 (272)
74 3a24_A Alpha-galactosidase; gl 93.6 0.67 2.3E-05 43.3 11.5 103 22-150 310-424 (641)
75 2p10_A MLL9387 protein; putati 93.3 1 3.5E-05 37.5 10.9 119 21-178 108-250 (286)
76 2cks_A Endoglucanase E-5; carb 93.1 0.58 2E-05 39.4 9.7 91 93-193 47-140 (306)
77 3noy_A 4-hydroxy-3-methylbut-2 93.1 0.32 1.1E-05 41.9 7.8 90 23-149 48-138 (366)
78 1eye_A DHPS 1, dihydropteroate 93.1 0.75 2.6E-05 38.5 10.1 93 92-190 115-211 (280)
79 3pnz_A Phosphotriesterase fami 93.0 3.8 0.00013 35.0 14.9 193 26-253 51-272 (330)
80 3iwp_A Copper homeostasis prot 92.9 3.1 0.00011 34.7 13.5 80 22-108 48-131 (287)
81 1ub3_A Aldolase protein; schif 92.9 0.74 2.5E-05 37.0 9.5 133 21-186 19-153 (220)
82 1zzm_A Putative deoxyribonucle 92.5 3.4 0.00012 33.4 13.4 140 21-193 19-159 (259)
83 3f4w_A Putative hexulose 6 pho 92.5 2.2 7.5E-05 33.6 11.8 185 22-263 11-201 (211)
84 1u83_A Phosphosulfolactate syn 92.4 1.3 4.5E-05 36.6 10.3 139 21-192 110-257 (276)
85 1egz_A Endoglucanase Z, EGZ, C 91.9 1.1 3.8E-05 37.3 9.8 91 92-194 42-135 (291)
86 3o6c_A PNP synthase, pyridoxin 91.7 0.24 8.2E-06 40.5 5.1 79 50-148 114-210 (260)
87 1nvm_A HOA, 4-hydroxy-2-oxoval 91.4 2.1 7E-05 36.9 11.2 109 23-154 95-204 (345)
88 3tn4_A Phosphotriesterase; lac 91.3 6.7 0.00023 33.9 19.6 205 25-253 87-300 (360)
89 2nx9_A Oxaloacetate decarboxyl 91.3 3.5 0.00012 37.0 12.8 105 24-154 103-211 (464)
90 1xwy_A DNAse TATD, deoxyribonu 91.3 2.3 7.9E-05 34.6 11.0 136 21-187 19-155 (264)
91 1twd_A Copper homeostasis prot 91.2 5.4 0.00018 32.7 16.4 124 22-172 10-137 (256)
92 3oa3_A Aldolase; structural ge 91.0 2 7E-05 35.9 10.2 133 21-186 74-208 (288)
93 7a3h_A Endoglucanase; hydrolas 90.9 1.9 6.6E-05 36.1 10.4 87 97-194 53-141 (303)
94 3ngj_A Deoxyribose-phosphate a 90.8 3 0.0001 33.8 10.9 133 21-186 43-177 (239)
95 7odc_A Protein (ornithine deca 90.8 3.7 0.00013 36.3 12.5 93 51-151 179-275 (424)
96 2bdq_A Copper homeostasis prot 90.7 4.2 0.00014 32.6 11.4 119 28-172 15-142 (224)
97 1tqj_A Ribulose-phosphate 3-ep 90.4 4.1 0.00014 32.8 11.5 113 1-151 1-119 (230)
98 3r12_A Deoxyribose-phosphate a 90.3 4.1 0.00014 33.5 11.4 133 21-186 59-193 (260)
99 3inp_A D-ribulose-phosphate 3- 89.5 3.8 0.00013 33.5 10.6 188 22-269 41-242 (246)
100 3pzt_A Endoglucanase; alpha/be 89.3 3 0.0001 35.4 10.3 87 91-191 71-163 (327)
101 2whl_A Beta-mannanase, baman5; 89.2 8.5 0.00029 31.8 14.4 89 91-194 34-126 (294)
102 1rqb_A Transcarboxylase 5S sub 89.0 7.3 0.00025 35.6 13.1 108 23-154 119-230 (539)
103 1tvn_A Cellulase, endoglucanas 88.9 2.8 9.6E-05 34.8 9.8 92 92-193 42-136 (293)
104 3jug_A Beta-mannanase; TIM-bar 88.8 11 0.00036 32.4 14.5 89 92-194 58-149 (345)
105 3ndo_A Deoxyribose-phosphate a 88.6 3.6 0.00012 33.2 9.7 132 21-185 29-165 (231)
106 4i6k_A Amidohydrolase family p 88.5 9.4 0.00032 31.6 12.8 188 21-253 53-248 (294)
107 3m0z_A Putative aldolase; MCSG 87.9 5 0.00017 32.2 9.7 68 89-181 146-214 (249)
108 3iv3_A Tagatose 1,6-diphosphat 87.8 2.2 7.7E-05 36.4 8.4 145 22-186 54-210 (332)
109 3sgv_B Undecaprenyl pyrophosph 87.7 2.2 7.5E-05 34.9 7.9 67 82-149 42-109 (253)
110 3qr3_A Endoglucanase EG-II; TI 87.7 2.1 7.1E-05 36.8 8.2 100 90-193 45-150 (340)
111 2cho_A Glucosaminidase, hexosa 87.6 5.3 0.00018 37.9 11.6 96 87-191 143-245 (716)
112 1h1n_A Endo type cellulase ENG 87.5 4.3 0.00015 33.9 10.1 98 91-192 34-133 (305)
113 1ub3_A Aldolase protein; schif 87.3 3.9 0.00013 32.8 9.1 136 9-185 56-204 (220)
114 1wky_A Endo-beta-1,4-mannanase 87.2 14 0.00048 33.0 13.7 89 91-194 42-134 (464)
115 3rcm_A TATD family hydrolase; 87.0 3.5 0.00012 34.4 9.1 129 21-179 17-149 (287)
116 3m6y_A 4-hydroxy-2-oxoglutarat 86.9 4.8 0.00016 32.6 9.2 68 89-181 169-237 (275)
117 1twd_A Copper homeostasis prot 86.8 8.8 0.0003 31.4 11.0 72 23-109 75-149 (256)
118 2p0o_A Hypothetical protein DU 86.5 15 0.00053 31.7 18.1 213 8-269 5-241 (372)
119 1f6y_A 5-methyltetrahydrofolat 86.3 13 0.00043 30.6 15.2 94 88-194 103-202 (262)
120 2vp8_A Dihydropteroate synthas 86.1 1.8 6.2E-05 36.8 6.8 82 91-179 150-240 (318)
121 3o6c_A PNP synthase, pyridoxin 86.1 4.9 0.00017 32.8 9.0 143 6-192 4-156 (260)
122 3o1n_A 3-dehydroquinate dehydr 86.1 13 0.00046 30.7 15.8 133 22-185 50-195 (276)
123 3ctl_A D-allulose-6-phosphate 86.0 9.6 0.00033 30.6 10.9 94 22-151 14-113 (231)
124 4hb7_A Dihydropteroate synthas 85.9 3.7 0.00013 34.0 8.4 74 92-178 116-192 (270)
125 3irs_A Uncharacterized protein 85.6 14 0.00048 30.5 15.0 207 22-269 48-259 (291)
126 1k87_A PUTA, proline dehydroge 85.5 11 0.00038 35.4 12.3 119 53-188 272-404 (669)
127 3r4v_A Putative uncharacterize 85.0 0.73 2.5E-05 38.5 3.7 138 48-218 70-216 (315)
128 3ovg_A Amidohydrolase; structu 84.7 8.8 0.0003 33.2 10.7 197 25-254 53-275 (363)
129 4h3d_A 3-dehydroquinate dehydr 84.4 16 0.00053 29.9 16.0 36 22-57 30-70 (258)
130 2gou_A Oxidoreductase, FMN-bin 84.2 13 0.00043 32.2 11.5 26 87-112 249-274 (365)
131 2cw6_A Hydroxymethylglutaryl-C 84.2 6.6 0.00022 32.9 9.5 112 24-154 83-210 (298)
132 3gtx_A Organophosphorus hydrol 84.1 19 0.00065 30.7 15.3 204 24-253 66-280 (339)
133 2v9d_A YAGE; dihydrodipicolini 84.0 14 0.00048 31.6 11.6 127 22-183 53-188 (343)
134 3vup_A Beta-1,4-mannanase; TIM 83.8 2.1 7.1E-05 35.6 6.3 72 82-153 36-112 (351)
135 1rh9_A Endo-beta-mannanase; en 83.8 2.9 9.8E-05 36.0 7.3 65 88-153 42-107 (373)
136 2oo0_A ODC, ornithine decarbox 83.4 16 0.00053 32.8 12.2 94 50-151 188-285 (471)
137 4g9p_A 4-hydroxy-3-methylbut-2 83.4 6.3 0.00022 34.4 9.1 100 24-150 41-143 (406)
138 3tsm_A IGPS, indole-3-glycerol 83.4 18 0.00061 29.9 18.7 183 22-266 80-266 (272)
139 2ehh_A DHDPS, dihydrodipicolin 83.1 19 0.00065 30.0 12.5 128 22-184 22-158 (294)
140 2yxg_A DHDPS, dihydrodipicolin 83.0 19 0.00065 29.9 12.5 128 22-184 22-158 (289)
141 2a4a_A Deoxyribose-phosphate a 82.6 4.6 0.00016 33.6 7.7 131 21-186 48-192 (281)
142 3dxi_A Putative aldolase; TIM 82.5 21 0.00073 30.1 12.2 180 23-244 26-242 (320)
143 4h8e_A Undecaprenyl pyrophosph 82.2 2.5 8.6E-05 34.6 5.8 99 83-190 50-149 (256)
144 2r8w_A AGR_C_1641P; APC7498, d 82.0 23 0.00078 30.1 12.2 131 22-188 56-195 (332)
145 1f75_A Undecaprenyl pyrophosph 82.0 9.1 0.00031 31.2 9.1 99 83-190 46-145 (249)
146 2y1h_A Putative deoxyribonucle 81.8 19 0.00065 29.1 14.2 138 21-179 20-161 (272)
147 1p1x_A Deoxyribose-phosphate a 81.8 5.1 0.00017 33.0 7.6 130 22-186 29-170 (260)
148 1f3t_A ODC, ornithine decarbox 81.7 25 0.00085 30.8 12.7 94 50-151 178-275 (425)
149 1uuq_A Mannosyl-oligosaccharid 81.5 5 0.00017 35.5 8.1 64 88-152 62-132 (440)
150 1h1y_A D-ribulose-5-phosphate 81.5 18 0.00062 28.7 11.6 85 5-110 6-96 (228)
151 1yix_A Deoxyribonuclease YCFH; 81.4 8.4 0.00029 31.0 9.0 134 21-187 20-154 (265)
152 1f6y_A 5-methyltetrahydrofolat 81.1 21 0.00073 29.2 11.5 113 24-152 79-200 (262)
153 3ugs_B Undecaprenyl pyrophosph 81.0 2.1 7.1E-05 34.4 4.8 110 84-206 33-147 (225)
154 3si9_A DHDPS, dihydrodipicolin 80.8 24 0.00083 29.7 12.8 133 22-189 44-185 (315)
155 2d2r_A Undecaprenyl pyrophosph 80.8 4.4 0.00015 33.0 6.8 65 84-149 42-107 (245)
156 2yci_X 5-methyltetrahydrofolat 80.7 23 0.00077 29.2 18.5 94 88-194 112-211 (271)
157 3iwp_A Copper homeostasis prot 80.7 23 0.0008 29.4 13.5 94 23-142 113-208 (287)
158 1j6o_A TATD-related deoxyribon 80.7 2.7 9.4E-05 34.4 5.7 137 20-187 26-163 (268)
159 1bqc_A Protein (beta-mannanase 80.6 12 0.0004 31.0 9.8 91 92-193 36-129 (302)
160 3a24_A Alpha-galactosidase; gl 80.6 4.1 0.00014 38.0 7.3 84 86-185 307-393 (641)
161 2xio_A Putative deoxyribonucle 80.4 22 0.00075 29.5 11.4 131 21-179 27-162 (301)
162 2ftp_A Hydroxymethylglutaryl-C 80.2 7.1 0.00024 32.7 8.3 111 24-154 86-213 (302)
163 3e2q_A Proline oxidase, prolin 80.2 13 0.00046 33.9 10.4 121 54-188 188-319 (551)
164 3oa3_A Aldolase; structural ge 80.1 11 0.00039 31.3 9.2 124 27-185 132-262 (288)
165 3k13_A 5-methyltetrahydrofolat 79.8 26 0.00088 29.4 12.4 92 89-193 121-222 (300)
166 2wkj_A N-acetylneuraminate lya 79.7 26 0.00088 29.3 13.2 132 22-188 33-173 (303)
167 1to3_A Putative aldolase YIHT; 79.7 7.8 0.00027 32.6 8.3 80 25-110 112-199 (304)
168 4f2d_A L-arabinose isomerase; 79.6 28 0.00096 31.4 12.4 134 122-269 20-167 (500)
169 2qf7_A Pyruvate carboxylase pr 79.5 55 0.0019 32.9 17.5 136 92-245 649-810 (1165)
170 3hgj_A Chromate reductase; TIM 79.5 29 0.00097 29.6 17.3 92 89-203 240-331 (349)
171 3k2g_A Resiniferatoxin-binding 79.3 30 0.001 29.8 15.4 203 24-253 89-304 (364)
172 2bdq_A Copper homeostasis prot 79.2 23 0.00077 28.3 12.6 102 23-148 78-182 (224)
173 2gzx_A Putative TATD related D 79.2 11 0.00037 30.3 8.9 134 22-186 17-151 (265)
174 2d73_A Alpha-glucosidase SUSB; 78.8 2.6 8.9E-05 39.9 5.4 87 86-184 369-467 (738)
175 2vc7_A Aryldialkylphosphatase; 78.7 23 0.0008 29.2 11.1 201 27-253 53-256 (314)
176 3qfe_A Putative dihydrodipicol 78.5 29 0.001 29.2 13.0 135 22-189 33-177 (318)
177 1to3_A Putative aldolase YIHT; 78.4 8.8 0.0003 32.3 8.2 86 92-187 112-198 (304)
178 3icg_A Endoglucanase D; cellul 78.3 12 0.0004 33.9 9.6 104 50-153 48-151 (515)
179 1sfl_A 3-dehydroquinate dehydr 78.2 25 0.00085 28.3 17.0 134 22-185 18-161 (238)
180 1z41_A YQJM, probable NADH-dep 78.1 31 0.001 29.3 17.1 24 89-112 230-253 (338)
181 3ble_A Citramalate synthase fr 78.0 8.6 0.00029 32.8 8.2 108 26-154 101-223 (337)
182 3fkr_A L-2-keto-3-deoxyarabona 78.0 30 0.001 29.0 12.7 135 22-189 30-174 (309)
183 1qwg_A PSL synthase;, (2R)-pho 77.9 18 0.00062 29.4 9.5 125 22-172 24-154 (251)
184 3ndz_A Endoglucanase D; cellot 77.9 31 0.0011 29.2 12.4 71 84-154 79-149 (345)
185 2rfg_A Dihydrodipicolinate syn 77.9 23 0.00079 29.5 10.7 132 22-189 22-162 (297)
186 3tak_A DHDPS, dihydrodipicolin 77.8 23 0.00079 29.4 10.7 132 22-189 23-163 (291)
187 3ngj_A Deoxyribose-phosphate a 77.8 12 0.0004 30.3 8.4 111 27-172 101-219 (239)
188 3og2_A Beta-galactosidase; TIM 77.7 35 0.0012 33.6 12.9 117 22-147 57-210 (1003)
189 2hsa_B 12-oxophytodienoate red 77.4 27 0.00094 30.5 11.4 139 21-185 171-347 (402)
190 4do7_A Amidohydrolase 2; enzym 77.4 8.8 0.0003 31.9 8.0 131 21-189 34-166 (303)
191 1vcv_A Probable deoxyribose-ph 77.3 8.9 0.0003 30.8 7.5 130 21-186 17-148 (226)
192 3vab_A Diaminopimelate decarbo 77.0 28 0.00096 30.8 11.6 96 49-151 200-298 (443)
193 3glc_A Aldolase LSRF; TIM barr 77.0 7.9 0.00027 32.5 7.4 76 23-108 127-209 (295)
194 3qas_B Undecaprenyl pyrophosph 76.9 9.3 0.00032 31.2 7.6 65 84-149 44-109 (253)
195 1ydn_A Hydroxymethylglutaryl-C 76.9 17 0.00058 30.2 9.6 112 24-154 82-209 (295)
196 1g01_A Endoglucanase; alpha/be 76.9 9.4 0.00032 32.7 8.2 54 93-153 58-112 (364)
197 1n7k_A Deoxyribose-phosphate a 76.7 28 0.00095 28.0 11.6 76 25-113 92-173 (234)
198 3b4u_A Dihydrodipicolinate syn 76.3 32 0.0011 28.5 11.9 130 22-182 25-163 (294)
199 3h5d_A DHDPS, dihydrodipicolin 76.2 27 0.00093 29.3 10.7 133 21-189 28-170 (311)
200 1p1x_A Deoxyribose-phosphate a 76.1 18 0.00063 29.6 9.3 119 25-172 89-217 (260)
201 4eiv_A Deoxyribose-phosphate a 76.0 20 0.00068 29.9 9.4 108 22-151 43-159 (297)
202 3na8_A Putative dihydrodipicol 76.0 34 0.0012 28.7 11.9 133 22-189 46-187 (315)
203 1wdp_A Beta-amylase; (beta/alp 75.7 6.1 0.00021 35.3 6.6 46 22-67 34-90 (495)
204 4f9i_A Proline dehydrogenase/d 75.6 44 0.0015 33.1 13.3 123 54-190 155-300 (1026)
205 2y8k_A Arabinoxylanase, carboh 75.4 5 0.00017 36.2 6.2 94 93-193 44-139 (491)
206 2v5c_A O-GLCNACASE NAGJ; glyco 75.4 23 0.00079 32.7 10.7 95 87-189 165-268 (594)
207 1fa2_A Beta-amylase; TIM barre 74.9 6 0.00021 35.4 6.3 46 22-67 35-91 (498)
208 3hbl_A Pyruvate carboxylase; T 74.7 19 0.00065 36.2 10.6 113 23-154 629-745 (1150)
209 3m6y_A 4-hydroxy-2-oxoglutarat 74.2 10 0.00036 30.7 7.0 99 21-138 168-272 (275)
210 1ceo_A Cellulase CELC; glycosy 74.1 4.9 0.00017 34.0 5.6 62 90-153 30-91 (343)
211 2c0h_A Mannan endo-1,4-beta-ma 73.8 5.6 0.00019 33.7 5.9 66 87-152 44-112 (353)
212 3r12_A Deoxyribose-phosphate a 73.3 14 0.00047 30.4 7.7 120 27-185 117-244 (260)
213 3o0f_A Putative metal-dependen 73.2 12 0.0004 31.5 7.5 59 6-64 13-71 (301)
214 3gr7_A NADPH dehydrogenase; fl 73.1 42 0.0015 28.5 15.1 67 89-172 230-296 (340)
215 3q94_A Fructose-bisphosphate a 73.1 15 0.00052 30.6 8.1 142 21-190 91-238 (288)
216 4hty_A Cellulase; (alpha/beta) 72.9 8.3 0.00028 33.1 6.8 95 91-193 88-190 (359)
217 3daq_A DHDPS, dihydrodipicolin 72.7 40 0.0014 27.9 12.4 132 22-189 24-164 (292)
218 3m0z_A Putative aldolase; MCSG 72.6 10 0.00034 30.4 6.5 74 21-111 145-222 (249)
219 1lt8_A Betaine-homocysteine me 72.2 26 0.00087 30.8 9.8 168 22-207 28-206 (406)
220 3m5v_A DHDPS, dihydrodipicolin 72.2 42 0.0014 27.9 13.9 133 22-189 29-171 (301)
221 3haz_A Proline dehydrogenase; 72.2 8.4 0.00029 38.1 7.3 103 79-190 203-316 (1001)
222 4aql_A Guanine deaminase; hydr 72.1 38 0.0013 30.0 11.2 114 27-151 150-263 (476)
223 1f6k_A N-acetylneuraminate lya 72.0 41 0.0014 27.8 11.9 132 22-188 25-165 (293)
224 3pzg_A Mannan endo-1,4-beta-ma 71.8 5 0.00017 35.0 5.1 66 88-153 43-122 (383)
225 2ffi_A 2-pyrone-4,6-dicarboxyl 71.7 38 0.0013 27.4 11.0 126 21-188 40-166 (288)
226 3nco_A Endoglucanase fncel5A; 71.5 11 0.00038 31.5 7.2 61 91-153 44-104 (320)
227 2vg3_A Undecaprenyl pyrophosph 71.4 7.3 0.00025 32.4 5.7 62 84-150 82-148 (284)
228 4e38_A Keto-hydroxyglutarate-a 71.3 38 0.0013 27.1 11.4 152 22-246 47-198 (232)
229 3q94_A Fructose-bisphosphate a 71.2 40 0.0014 28.0 10.3 72 122-196 112-189 (288)
230 3l5l_A Xenobiotic reductase A; 71.1 49 0.0017 28.3 13.8 27 86-112 244-270 (363)
231 3bg3_A Pyruvate carboxylase, m 71.1 16 0.00055 34.6 8.7 116 23-154 199-315 (718)
232 3qze_A DHDPS, dihydrodipicolin 70.9 46 0.0016 27.9 12.0 132 22-189 45-185 (314)
233 1h4p_A Glucan 1,3-beta-glucosi 70.6 7.3 0.00025 34.2 6.0 59 91-153 76-136 (408)
234 3ndz_A Endoglucanase D; cellot 70.5 15 0.0005 31.4 7.8 62 91-154 45-106 (345)
235 3ues_A Alpha-1,3/4-fucosidase; 70.4 29 0.001 31.1 9.9 118 90-211 64-203 (478)
236 2v5d_A O-GLCNACASE NAGJ; famil 70.4 46 0.0016 31.6 11.8 99 87-190 165-269 (737)
237 3n9k_A Glucan 1,3-beta-glucosi 70.2 8 0.00028 33.9 6.1 57 91-152 76-134 (399)
238 4e8d_A Glycosyl hydrolase, fam 70.2 48 0.0016 30.6 11.4 46 21-66 32-90 (595)
239 3lab_A Putative KDPG (2-keto-3 70.2 39 0.0013 26.8 10.2 149 22-243 26-180 (217)
240 1olt_A Oxygen-independent copr 69.6 46 0.0016 29.5 11.1 111 24-146 153-283 (457)
241 2qf7_A Pyruvate carboxylase pr 69.6 32 0.0011 34.6 10.9 112 24-154 648-762 (1165)
242 3nco_A Endoglucanase fncel5A; 69.6 30 0.001 28.8 9.5 100 50-154 44-144 (320)
243 3l21_A DHDPS, dihydrodipicolin 69.5 48 0.0017 27.6 11.8 132 22-189 37-177 (304)
244 2yci_X 5-methyltetrahydrofolat 69.3 46 0.0016 27.3 12.1 81 24-112 88-173 (271)
245 3aof_A Endoglucanase; glycosyl 69.3 9 0.00031 31.9 6.1 61 91-153 36-96 (317)
246 1rpx_A Protein (ribulose-phosp 69.1 40 0.0014 26.5 13.0 71 22-110 24-100 (230)
247 3btn_A Antizyme inhibitor 1; T 69.0 61 0.0021 28.6 12.6 91 51-151 179-272 (448)
248 1n7k_A Deoxyribose-phosphate a 68.9 43 0.0015 26.9 13.3 130 21-186 36-168 (234)
249 3txv_A Probable tagatose 6-pho 68.9 50 0.0017 29.3 10.8 145 22-173 33-205 (450)
250 1tx2_A DHPS, dihydropteroate s 68.7 50 0.0017 27.6 10.4 81 24-111 125-207 (297)
251 3civ_A Endo-beta-1,4-mannanase 68.7 4.6 0.00016 34.6 4.2 63 91-153 56-119 (343)
252 2fli_A Ribulose-phosphate 3-ep 68.3 40 0.0014 26.2 12.1 71 22-110 17-93 (220)
253 1a0c_A Xylose isomerase; ketol 68.2 64 0.0022 28.5 13.4 65 83-151 75-140 (438)
254 1vli_A Spore coat polysacchari 68.0 9.1 0.00031 33.3 5.9 66 87-153 43-123 (385)
255 2xfr_A Beta-amylase; hydrolase 68.0 13 0.00045 33.5 6.9 46 22-67 32-88 (535)
256 1edg_A Endoglucanase A; family 67.5 10 0.00035 32.7 6.3 60 91-153 64-123 (380)
257 3k13_A 5-methyltetrahydrofolat 67.3 54 0.0019 27.4 10.9 115 24-148 94-215 (300)
258 2ojp_A DHDPS, dihydrodipicolin 67.2 52 0.0018 27.2 10.5 121 22-172 23-152 (292)
259 1q7z_A 5-methyltetrahydrofolat 67.2 44 0.0015 30.7 10.6 145 49-206 46-195 (566)
260 3icg_A Endoglucanase D; cellul 67.1 17 0.00057 32.9 7.8 61 91-153 48-108 (515)
261 3bfj_A 1,3-propanediol oxidore 67.1 31 0.0011 29.8 9.3 96 1-110 1-101 (387)
262 3ivz_A Nitrilase; alpha-beta s 67.1 21 0.00072 28.8 7.8 63 82-148 15-84 (262)
263 2je8_A Beta-mannosidase; glyco 67.0 45 0.0015 32.2 11.1 48 87-152 351-398 (848)
264 3ayr_A Endoglucanase; TIM barr 66.9 20 0.0007 30.7 8.0 62 90-153 64-125 (376)
265 2qv5_A AGR_C_5032P, uncharacte 66.8 36 0.0012 27.9 9.0 51 82-148 192-242 (261)
266 2jep_A Xyloglucanase; family 5 66.7 17 0.00059 31.3 7.6 60 92-153 73-132 (395)
267 1gvf_A Tagatose-bisphosphate a 66.6 55 0.0019 27.2 10.5 72 122-196 106-185 (286)
268 3l55_A B-1,4-endoglucanase/cel 66.3 9.6 0.00033 32.7 5.7 58 92-153 56-113 (353)
269 3fst_A 5,10-methylenetetrahydr 66.3 57 0.002 27.3 12.9 79 23-114 41-123 (304)
270 3dz1_A Dihydrodipicolinate syn 66.2 57 0.002 27.3 12.7 128 22-183 30-165 (313)
271 3nzp_A Arginine decarboxylase; 66.0 85 0.0029 29.1 12.6 97 51-151 213-321 (619)
272 3cz8_A Putative sporulation-sp 66.0 12 0.00041 31.5 6.3 44 23-66 100-151 (319)
273 1knw_A Diaminopimelate decarbo 65.9 65 0.0022 28.1 11.2 93 49-151 171-269 (425)
274 1ece_A Endocellulase E1; glyco 65.8 6.8 0.00023 33.3 4.7 102 90-192 46-162 (358)
275 2vc6_A MOSA, dihydrodipicolina 65.8 56 0.0019 27.0 11.7 132 22-188 22-162 (292)
276 3igz_B Cofactor-independent ph 65.7 54 0.0018 30.0 10.6 113 14-137 103-225 (561)
277 3cu2_A Ribulose-5-phosphate 3- 65.2 29 0.00098 28.0 8.0 184 22-268 27-234 (237)
278 3hbl_A Pyruvate carboxylase; T 65.1 1.2E+02 0.0041 30.5 19.3 199 22-245 553-793 (1150)
279 1now_A Beta-hexosaminidase bet 65.1 23 0.00079 32.1 8.2 64 87-151 167-240 (507)
280 3jug_A Beta-mannanase; TIM-bar 64.2 67 0.0023 27.3 19.6 60 87-153 86-146 (345)
281 1vjz_A Endoglucanase; TM1752, 64.2 6.3 0.00021 33.4 4.1 62 90-153 38-99 (341)
282 3elf_A Fructose-bisphosphate a 64.1 69 0.0023 27.4 11.4 126 51-195 78-216 (349)
283 1gvf_A Tagatose-bisphosphate a 64.1 28 0.00095 29.0 7.9 144 21-190 85-234 (286)
284 3nav_A Tryptophan synthase alp 64.1 46 0.0016 27.3 9.2 46 22-69 113-159 (271)
285 3tha_A Tryptophan synthase alp 64.0 57 0.002 26.5 11.2 46 22-69 104-150 (252)
286 1qnr_A Endo-1,4-B-D-mannanase; 63.8 8.4 0.00029 32.4 4.9 65 88-153 36-112 (344)
287 3qxb_A Putative xylose isomera 63.6 39 0.0014 27.8 9.1 92 48-149 36-132 (316)
288 2l69_A Rossmann 2X3 fold prote 63.6 15 0.0005 24.9 4.9 92 22-148 14-105 (134)
289 3dbi_A Sugar-binding transcrip 63.4 62 0.0021 26.7 10.8 104 26-147 111-214 (338)
290 3thd_A Beta-galactosidase; TIM 63.3 67 0.0023 30.0 10.9 89 21-109 40-162 (654)
291 2gjx_A Beta-hexosaminidase alp 63.2 22 0.00076 32.1 7.7 64 87-151 161-235 (507)
292 2vef_A Dihydropteroate synthas 63.1 20 0.00068 30.3 7.0 94 92-191 120-236 (314)
293 3flu_A DHDPS, dihydrodipicolin 63.1 64 0.0022 26.7 12.3 132 22-189 29-169 (297)
294 1rvg_A Fructose-1,6-bisphospha 63.1 67 0.0023 26.9 10.7 159 22-195 4-182 (305)
295 3mcm_A 2-amino-4-hydroxy-6-hyd 63.0 5.1 0.00018 35.6 3.4 81 91-178 305-388 (442)
296 1o5k_A DHDPS, dihydrodipicolin 62.5 67 0.0023 26.7 12.3 133 22-189 34-175 (306)
297 3epo_A Thiamine biosynthesis p 62.4 35 0.0012 31.0 8.5 108 25-149 234-372 (612)
298 1yht_A DSPB; beta barrel, hydr 62.0 18 0.00061 31.3 6.6 65 87-151 32-115 (367)
299 3igz_B Cofactor-independent ph 61.8 69 0.0024 29.3 10.5 57 87-148 139-197 (561)
300 4fnq_A Alpha-galactosidase AGA 61.7 12 0.0004 35.7 5.8 63 88-150 346-411 (729)
301 2bmb_A Folic acid synthesis pr 61.5 37 0.0013 31.0 8.8 81 92-179 346-459 (545)
302 3n2b_A Diaminopimelate decarbo 61.4 31 0.0011 30.4 8.3 93 50-151 204-300 (441)
303 4a29_A Engineered retro-aldol 61.3 14 0.00048 30.2 5.4 116 94-253 119-236 (258)
304 3qm3_A Fructose-bisphosphate a 61.3 79 0.0027 27.1 13.1 123 52-194 91-227 (357)
305 2wqp_A Polysialic acid capsule 61.3 11 0.00038 32.4 5.1 67 87-153 34-113 (349)
306 3gg7_A Uncharacterized metallo 61.1 46 0.0016 27.0 8.7 124 22-178 15-139 (254)
307 2osx_A Endoglycoceramidase II; 60.7 9.8 0.00033 34.1 4.9 59 91-153 68-127 (481)
308 4dpp_A DHDPS 2, dihydrodipicol 60.6 71 0.0024 27.4 10.1 131 22-189 81-219 (360)
309 3a5f_A Dihydrodipicolinate syn 60.5 42 0.0015 27.7 8.6 120 23-172 24-152 (291)
310 3rhg_A Putative phophotriester 60.5 81 0.0028 27.0 12.7 202 25-253 79-294 (365)
311 2zvr_A Uncharacterized protein 60.3 66 0.0023 26.0 11.6 88 48-151 42-133 (290)
312 1dos_A Aldolase class II; lyas 60.2 82 0.0028 27.0 14.3 128 50-194 91-229 (358)
313 1vcv_A Probable deoxyribose-ph 60.1 49 0.0017 26.4 8.4 70 27-112 73-152 (226)
314 3gh5_A HEX1, beta-hexosaminida 60.0 21 0.00071 32.5 6.9 64 87-151 198-276 (525)
315 3b0p_A TRNA-dihydrouridine syn 59.9 61 0.0021 27.6 9.6 80 22-111 71-167 (350)
316 3qk7_A Transcriptional regulat 59.7 59 0.002 26.2 9.4 107 22-147 53-159 (294)
317 1vhc_A Putative KHG/KDPG aldol 59.3 65 0.0022 25.5 11.5 154 22-248 30-184 (224)
318 3n9r_A Fructose-bisphosphate a 59.2 73 0.0025 26.7 9.7 71 122-195 106-184 (307)
319 1uoz_A Putative cellulase; hyd 59.1 54 0.0019 27.6 8.8 154 88-252 76-239 (315)
320 3ovp_A Ribulose-phosphate 3-ep 59.1 66 0.0022 25.5 11.4 94 22-151 18-119 (228)
321 2f6k_A Metal-dependent hydrola 58.8 71 0.0024 25.9 9.8 108 22-153 36-157 (307)
322 3o0f_A Putative metal-dependen 58.8 9.2 0.00031 32.1 4.1 41 24-64 216-257 (301)
323 2hl0_A Threonyl-tRNA synthetas 58.7 41 0.0014 24.7 7.0 60 88-154 59-119 (143)
324 4awe_A Endo-beta-D-1,4-mannana 58.5 4.9 0.00017 33.6 2.5 66 88-153 37-123 (387)
325 4gbu_A NADPH dehydrogenase 1; 58.5 4.5 0.00015 35.5 2.2 21 22-42 173-193 (400)
326 1h4p_A Glucan 1,3-beta-glucosi 58.2 79 0.0027 27.4 10.3 103 51-154 77-192 (408)
327 1gqo_A Dehydroquinase; dehydra 57.9 52 0.0018 24.2 7.5 78 131-221 29-106 (143)
328 3ff4_A Uncharacterized protein 57.9 13 0.00044 26.6 4.2 42 89-151 70-111 (122)
329 1ccw_A Protein (glutamate muta 57.8 31 0.0011 24.9 6.5 96 27-151 24-119 (137)
330 3gip_A N-acyl-D-glutamate deac 57.5 86 0.0029 27.7 10.6 102 31-154 177-284 (480)
331 3eb2_A Putative dihydrodipicol 57.5 82 0.0028 26.1 11.3 132 22-189 26-166 (300)
332 2dqw_A Dihydropteroate synthas 57.3 83 0.0028 26.2 13.2 112 24-149 113-228 (294)
333 1ceo_A Cellulase CELC; glycosy 57.2 77 0.0026 26.4 9.8 70 85-154 66-140 (343)
334 3glc_A Aldolase LSRF; TIM barr 56.9 84 0.0029 26.1 10.3 77 93-186 130-209 (295)
335 1x7f_A Outer surface protein; 56.9 17 0.0006 31.6 5.6 54 88-151 41-94 (385)
336 2p0o_A Hypothetical protein DU 56.9 21 0.00072 30.9 6.1 53 89-151 18-70 (372)
337 3aof_A Endoglucanase; glycosyl 56.8 57 0.0019 26.8 8.8 66 85-154 71-136 (317)
338 3pm6_A Putative fructose-bisph 56.6 88 0.003 26.2 10.7 106 47-192 13-124 (306)
339 3n9k_A Glucan 1,3-beta-glucosi 56.6 99 0.0034 26.8 12.2 100 53-154 79-191 (399)
340 1vc4_A Indole-3-glycerol phosp 56.5 78 0.0027 25.6 15.8 177 22-263 66-250 (254)
341 2yr1_A 3-dehydroquinate dehydr 56.4 79 0.0027 25.6 15.9 22 22-43 30-54 (257)
342 1jak_A Beta-N-acetylhexosamini 56.2 26 0.00089 31.7 6.9 64 87-151 173-251 (512)
343 4a3u_A NCR, NADH\:flavin oxido 56.2 5 0.00017 34.6 2.1 21 22-42 153-173 (358)
344 3ozo_A N-acetylglucosaminidase 56.2 39 0.0013 31.1 8.1 64 87-151 203-276 (572)
345 1uqr_A 3-dehydroquinate dehydr 55.8 51 0.0017 24.6 7.2 78 131-221 30-107 (154)
346 3rot_A ABC sugar transporter, 55.8 79 0.0027 25.4 13.9 111 24-150 51-166 (297)
347 2xsa_A Ogoga, hyaluronoglucosa 55.5 1.1E+02 0.0038 27.1 12.0 92 92-190 21-117 (447)
348 3fy1_A Amcase, TSA1902, acidic 55.5 17 0.00059 31.6 5.5 38 23-60 99-149 (395)
349 2vg0_A Short-chain Z-isoprenyl 55.0 36 0.0012 27.2 6.8 61 84-149 30-93 (227)
350 2uyg_A 3-dehydroquinate dehydr 55.0 62 0.0021 24.0 7.7 96 132-241 29-140 (149)
351 1zco_A 2-dehydro-3-deoxyphosph 54.7 46 0.0016 27.1 7.6 62 87-154 36-97 (262)
352 1gqi_A Alpha-glucuronidase; (a 54.7 32 0.0011 32.3 7.1 55 88-150 184-238 (708)
353 3lwz_A 3-dehydroquinate dehydr 54.7 64 0.0022 24.0 7.7 78 131-221 36-113 (153)
354 1o98_A 2,3-bisphosphoglycerate 54.7 67 0.0023 29.1 9.2 112 13-137 89-206 (511)
355 3inp_A D-ribulose-phosphate 3- 54.3 19 0.00065 29.2 5.2 43 22-65 97-139 (246)
356 1ps9_A 2,4-dienoyl-COA reducta 54.2 1E+02 0.0035 28.6 10.9 139 21-185 141-309 (671)
357 3cpr_A Dihydrodipicolinate syn 54.1 94 0.0032 25.8 13.1 132 22-189 38-178 (304)
358 3nvt_A 3-deoxy-D-arabino-heptu 53.9 20 0.00068 31.2 5.5 62 87-154 155-216 (385)
359 1jnd_A Imaginal DISC growth fa 53.9 31 0.0011 30.2 6.9 21 24-44 113-133 (420)
360 3jr2_A Hexulose-6-phosphate sy 53.8 77 0.0026 24.7 11.8 108 22-172 17-129 (218)
361 1i4n_A Indole-3-glycerol phosp 53.7 37 0.0013 27.6 6.8 179 22-265 62-246 (251)
362 3ctl_A D-allulose-6-phosphate 53.7 20 0.00069 28.7 5.2 43 22-65 68-111 (231)
363 1xky_A Dihydrodipicolinate syn 53.5 95 0.0033 25.7 12.5 132 22-189 34-174 (301)
364 3iix_A Biotin synthetase, puta 53.2 99 0.0034 25.8 10.8 43 22-64 85-134 (348)
365 3ayr_A Endoglucanase; TIM barr 53.1 92 0.0031 26.5 9.8 69 84-153 99-167 (376)
366 3bxw_B Chitinase domain-contai 53.1 23 0.0008 30.8 5.9 44 23-66 174-226 (393)
367 3p6l_A Sugar phosphate isomera 52.9 83 0.0028 24.8 9.1 87 90-186 24-111 (262)
368 3f4w_A Putative hexulose 6 pho 52.8 61 0.0021 24.9 7.9 73 22-111 65-137 (211)
369 1pno_A NAD(P) transhydrogenase 52.5 32 0.0011 26.1 5.6 60 101-182 22-83 (180)
370 2dvt_A Thermophilic reversible 52.3 56 0.0019 26.9 8.1 113 22-152 38-166 (327)
371 2nly_A BH1492 protein, diverge 52.0 92 0.0032 25.1 10.0 55 81-148 165-219 (245)
372 3m47_A Orotidine 5'-phosphate 51.8 65 0.0022 25.5 8.0 76 24-107 81-156 (228)
373 1of8_A Phospho-2-dehydro-3-deo 51.4 1.2E+02 0.004 26.2 11.6 96 50-154 56-162 (370)
374 1edg_A Endoglucanase A; family 51.3 81 0.0028 26.8 9.1 103 50-153 64-169 (380)
375 4f0r_A 5-methylthioadenosine/S 51.1 65 0.0022 27.8 8.7 105 26-151 115-220 (447)
376 2vqe_K 30S ribosomal protein S 50.7 23 0.00077 25.7 4.5 45 23-67 65-109 (129)
377 1vpq_A Hypothetical protein TM 50.7 1E+02 0.0035 25.2 9.5 56 4-60 12-76 (273)
378 1rvg_A Fructose-1,6-bisphospha 50.6 1.1E+02 0.0038 25.6 11.7 102 48-192 4-106 (305)
379 2epl_X N-acetyl-beta-D-glucosa 50.6 29 0.001 32.3 6.4 64 87-151 101-165 (627)
380 1uas_A Alpha-galactosidase; TI 50.2 18 0.00061 31.1 4.7 96 88-187 26-131 (362)
381 3egc_A Putative ribose operon 50.2 74 0.0025 25.4 8.4 105 24-147 54-158 (291)
382 3gbv_A Putative LACI-family tr 50.2 96 0.0033 24.7 10.3 82 24-109 59-142 (304)
383 3l6u_A ABC-type sugar transpor 50.1 95 0.0032 24.7 10.5 109 25-150 55-172 (293)
384 2jep_A Xyloglucanase; family 5 50.0 1E+02 0.0035 26.3 9.6 106 49-154 71-182 (395)
385 2pi6_A Chitinase-3-like protei 49.8 20 0.00069 30.6 4.9 39 23-61 99-145 (361)
386 2w6r_A Imidazole glycerol phos 49.7 98 0.0033 24.7 12.4 44 22-65 31-79 (266)
387 3nvt_A 3-deoxy-D-arabino-heptu 49.4 1.2E+02 0.0041 26.3 9.7 43 23-65 158-211 (385)
388 3khd_A Pyruvate kinase; malari 49.3 27 0.00094 31.6 5.8 41 22-62 218-258 (520)
389 3c8n_A Probable F420-dependent 49.2 8 0.00027 33.1 2.2 37 3-41 21-58 (356)
390 3r8n_K 30S ribosomal protein S 49.1 19 0.00066 25.6 3.9 44 23-67 55-99 (117)
391 3gk0_A PNP synthase, pyridoxin 49.0 85 0.0029 25.8 8.1 82 22-103 103-216 (278)
392 1zco_A 2-dehydro-3-deoxyphosph 49.0 1.1E+02 0.0036 24.9 9.8 43 23-65 39-92 (262)
393 3l5a_A NADH/flavin oxidoreduct 48.9 7.9 0.00027 34.2 2.2 22 21-42 170-191 (419)
394 1wbh_A KHG/KDPG aldolase; lyas 48.9 95 0.0032 24.3 11.0 155 22-248 29-183 (214)
395 1tv8_A MOAA, molybdenum cofact 48.7 1.2E+02 0.004 25.3 13.9 137 86-254 51-198 (340)
396 2yb1_A Amidohydrolase; HET: AM 48.7 47 0.0016 27.3 7.0 60 5-64 1-60 (292)
397 1m5w_A Pyridoxal phosphate bio 48.6 85 0.0029 25.3 7.9 83 22-104 75-189 (243)
398 3no5_A Uncharacterized protein 48.5 48 0.0016 27.3 6.8 95 88-194 30-153 (275)
399 1ud2_A Amylase, alpha-amylase; 48.4 26 0.00089 31.2 5.6 75 22-105 24-98 (480)
400 3ndo_A Deoxyribose-phosphate a 48.3 98 0.0034 24.7 8.4 124 27-185 86-218 (231)
401 1qop_A Tryptophan synthase alp 48.2 1.1E+02 0.0037 24.8 10.4 45 22-67 110-154 (268)
402 3fok_A Uncharacterized protein 48.1 41 0.0014 28.2 6.3 50 93-152 133-184 (307)
403 1wb0_A Chitinase 1, chitotrios 48.1 30 0.001 30.6 5.9 43 23-65 99-161 (445)
404 2qjg_A Putative aldolase MJ040 48.0 34 0.0012 27.7 5.9 140 93-263 104-251 (273)
405 3g6m_A Chitinase, crchi1; inhi 48.0 33 0.0011 29.8 6.1 36 23-58 134-178 (406)
406 1djl_A Transhydrogenase DIII; 47.9 30 0.001 27.0 5.0 60 101-182 44-105 (207)
407 4d9a_A 2-pyrone-4,6-dicarbaxyl 47.8 1.2E+02 0.004 25.0 11.5 124 22-189 55-180 (303)
408 1n8f_A DAHP synthetase; (beta/ 47.8 1.3E+02 0.0045 25.7 15.3 162 79-253 62-267 (350)
409 3rjz_A N-type ATP pyrophosphat 47.6 17 0.00058 29.4 3.8 43 24-66 53-96 (237)
410 1wpc_A Glucan 1,4-alpha-maltoh 47.6 28 0.00094 31.0 5.7 75 22-105 26-100 (485)
411 3ngf_A AP endonuclease, family 47.5 1E+02 0.0036 24.4 9.5 90 45-151 21-114 (269)
412 1vpy_A Protein (hypothetical p 47.5 1.1E+02 0.0036 25.4 8.8 55 4-60 12-68 (289)
413 7a3h_A Endoglucanase; hydrolas 47.2 1.2E+02 0.004 24.9 21.5 177 49-254 46-231 (303)
414 1tg7_A Beta-galactosidase; TIM 47.1 1.9E+02 0.0064 28.5 11.6 121 22-146 37-190 (971)
415 3n8k_A 3-dehydroquinate dehydr 47.1 91 0.0031 23.6 7.7 79 130-221 56-134 (172)
416 2isw_A Putative fructose-1,6-b 47.1 1.3E+02 0.0044 25.4 9.4 102 48-192 5-109 (323)
417 3n9r_A Fructose-bisphosphate a 47.0 1.3E+02 0.0043 25.2 10.8 102 48-192 4-108 (307)
418 3bh4_A Alpha-amylase; calcium, 47.0 29 0.001 30.8 5.7 75 22-105 22-96 (483)
419 3rjt_A Lipolytic protein G-D-S 46.8 68 0.0023 24.0 7.3 60 83-148 112-172 (216)
420 3vnd_A TSA, tryptophan synthas 46.8 26 0.00089 28.8 4.9 45 22-68 111-156 (267)
421 2isw_A Putative fructose-1,6-b 46.5 1.3E+02 0.0045 25.3 14.7 71 122-195 107-182 (323)
422 3dlo_A Universal stress protei 46.4 80 0.0027 22.8 7.4 60 86-150 38-97 (155)
423 3iv3_A Tagatose 1,6-diphosphat 46.3 1.4E+02 0.0046 25.4 11.1 121 24-148 113-249 (332)
424 2fsv_C NAD(P) transhydrogenase 46.1 33 0.0011 26.6 5.0 60 101-182 45-106 (203)
425 1lwj_A 4-alpha-glucanotransfer 46.0 24 0.00081 31.0 4.9 44 22-65 24-88 (441)
426 3k4h_A Putative transcriptiona 45.6 1.1E+02 0.0038 24.2 9.7 105 25-147 60-164 (292)
427 2ekc_A AQ_1548, tryptophan syn 45.5 1.2E+02 0.0041 24.5 10.5 45 22-67 110-154 (262)
428 1vjz_A Endoglucanase; TM1752, 45.4 1.3E+02 0.0045 24.9 10.3 68 86-153 75-150 (341)
429 3ajx_A 3-hexulose-6-phosphate 45.4 99 0.0034 23.5 11.7 186 22-267 11-203 (207)
430 4hty_A Cellulase; (alpha/beta) 45.0 1.4E+02 0.0047 25.2 9.5 96 52-153 90-188 (359)
431 2ztj_A Homocitrate synthase; ( 44.8 1.5E+02 0.0051 25.5 12.4 19 83-101 109-127 (382)
432 1hvx_A Alpha-amylase; hydrolas 44.7 35 0.0012 30.7 5.9 74 22-105 25-99 (515)
433 1xw8_A UPF0271 protein YBGL; N 44.7 85 0.0029 25.4 7.4 120 88-217 38-162 (252)
434 1ll7_A Chitinase 1; beta-alpha 44.6 41 0.0014 29.1 6.1 36 23-58 116-160 (392)
435 1szn_A Alpha-galactosidase; (b 44.6 29 0.00098 30.5 5.1 64 88-151 29-97 (417)
436 1ydo_A HMG-COA lyase; TIM-barr 44.4 1.4E+02 0.0047 24.9 10.8 135 22-176 61-196 (307)
437 1mxs_A KDPG aldolase; 2-keto-3 44.4 1.2E+02 0.004 24.0 10.3 154 22-248 39-193 (225)
438 1k77_A EC1530, hypothetical pr 44.4 1.1E+02 0.0038 23.9 8.8 86 47-148 15-102 (260)
439 3nav_A Tryptophan synthase alp 44.3 95 0.0032 25.4 8.0 40 90-147 114-153 (271)
440 3tr9_A Dihydropteroate synthas 44.3 1.4E+02 0.0048 25.0 11.9 112 24-149 115-233 (314)
441 1xim_A D-xylose isomerase; iso 44.3 1.5E+02 0.0051 25.3 10.1 91 47-148 33-133 (393)
442 1u83_A Phosphosulfolactate syn 44.3 1.3E+02 0.0045 24.7 11.4 123 22-173 51-179 (276)
443 1w9p_A Chitinase; peptide inhi 44.3 41 0.0014 29.6 6.1 35 24-58 158-201 (433)
444 2x5e_A UPF0271 protein PA4511; 44.2 80 0.0027 25.6 7.2 171 88-268 49-244 (252)
445 3qr3_A Endoglucanase EG-II; TI 43.9 1.5E+02 0.005 25.1 11.8 197 49-255 45-264 (340)
446 1eye_A DHPS 1, dihydropteroate 43.9 1.3E+02 0.0046 24.6 13.7 112 24-149 90-208 (280)
447 2wm1_A 2-amino-3-carboxymucona 43.8 1.3E+02 0.0044 24.9 9.1 107 22-153 55-177 (336)
448 1h05_A 3-dehydroquinate dehydr 43.7 53 0.0018 24.3 5.6 97 131-241 31-142 (146)
449 1aw2_A Triosephosphate isomera 43.5 81 0.0028 25.7 7.3 155 8-172 6-189 (256)
450 1xla_A D-xylose isomerase; iso 43.4 1.2E+02 0.0042 25.9 9.1 96 48-150 34-136 (394)
451 1vf8_A YM1, secretory protein; 43.3 41 0.0014 28.9 5.9 42 24-65 100-161 (377)
452 1d4o_A NADP(H) transhydrogenas 43.3 33 0.0011 26.1 4.5 60 101-182 21-82 (184)
453 3apt_A Methylenetetrahydrofola 43.3 1.4E+02 0.0049 24.8 15.3 79 23-114 31-112 (310)
454 1yqh_A DUF77, IG hypothetical 43.2 64 0.0022 22.5 5.8 53 49-108 27-79 (109)
455 2nwr_A 2-dehydro-3-deoxyphosph 43.2 57 0.002 26.7 6.4 70 79-154 12-85 (267)
456 1pii_A N-(5'phosphoribosyl)ant 43.2 74 0.0025 28.3 7.6 63 94-187 123-185 (452)
457 3ivs_A Homocitrate synthase, m 43.1 1.5E+02 0.0053 25.9 9.5 78 24-104 90-167 (423)
458 2ekc_A AQ_1548, tryptophan syn 43.1 1.3E+02 0.0044 24.2 12.2 40 90-147 111-150 (262)
459 2z1k_A (NEO)pullulanase; hydro 43.0 41 0.0014 29.7 6.1 44 22-65 51-115 (475)
460 3pzg_A Mannan endo-1,4-beta-ma 43.0 1.6E+02 0.0055 25.3 13.3 133 8-153 30-187 (383)
461 3aqu_A AT4G19810; stress respo 42.9 45 0.0015 28.4 6.0 36 24-59 98-142 (356)
462 1bxb_A Xylose isomerase; xylos 42.7 1.4E+02 0.0048 25.4 9.3 91 47-148 33-133 (387)
463 3ksm_A ABC-type sugar transpor 42.6 1.2E+02 0.0041 23.7 12.7 108 25-148 49-162 (276)
464 3nzq_A ADC, biosynthetic argin 42.6 2.2E+02 0.0074 26.7 11.8 96 52-151 253-361 (666)
465 2vp8_A Dihydropteroate synthas 42.5 1.5E+02 0.0052 24.9 11.2 110 24-149 127-248 (318)
466 1vs1_A 3-deoxy-7-phosphoheptul 42.3 32 0.0011 28.4 4.8 62 87-154 51-112 (276)
467 3vnd_A TSA, tryptophan synthas 42.3 1.4E+02 0.0047 24.3 9.4 95 23-148 34-152 (267)
468 3tml_A 2-dehydro-3-deoxyphosph 42.3 55 0.0019 27.2 6.2 70 80-154 27-98 (288)
469 2fiq_A Putative tagatose 6-pho 42.0 1.8E+02 0.0061 25.5 11.6 145 22-172 26-197 (420)
470 1q7z_A 5-methyltetrahydrofolat 41.9 1.5E+02 0.005 27.2 9.6 110 47-192 392-509 (566)
471 3tha_A Tryptophan synthase alp 41.6 1E+02 0.0035 25.0 7.6 96 22-147 26-144 (252)
472 1lxj_A YBL001C, hypothetical 1 41.5 61 0.0021 22.3 5.4 52 49-107 26-77 (104)
473 1tre_A Triosephosphate isomera 41.3 85 0.0029 25.5 7.1 155 8-172 6-187 (255)
474 3tjl_A NADPH dehydrogenase; OL 41.3 15 0.00052 32.2 2.8 20 23-42 170-189 (407)
475 3o74_A Fructose transport syst 41.2 1.3E+02 0.0043 23.5 10.9 108 24-149 48-155 (272)
476 2q02_A Putative cytoplasmic pr 41.2 1.3E+02 0.0044 23.7 9.9 87 47-151 19-106 (272)
477 3qho_A Endoglucanase, 458AA lo 41.1 57 0.002 29.0 6.6 63 90-152 86-155 (458)
478 3a5v_A Alpha-galactosidase; be 41.0 30 0.001 30.1 4.7 95 88-186 26-129 (397)
479 3vni_A Xylose isomerase domain 41.0 1.4E+02 0.0047 23.9 9.9 87 47-148 17-105 (294)
480 2o7s_A DHQ-SDH PR, bifunctiona 41.0 2E+02 0.0068 25.8 13.0 44 22-65 15-63 (523)
481 3cu2_A Ribulose-5-phosphate 3- 41.0 72 0.0025 25.6 6.6 140 22-206 80-232 (237)
482 3l55_A B-1,4-endoglucanase/cel 40.9 1.7E+02 0.0057 24.8 13.0 71 84-154 87-162 (353)
483 1goi_A Chitinase B; chitin deg 40.8 37 0.0013 30.5 5.4 37 23-59 124-168 (499)
484 3t05_A Pyruvate kinase, PK; te 40.8 92 0.0031 28.8 8.0 41 26-66 198-238 (606)
485 1l8n_A Alpha-D-glucuronidase; 40.7 33 0.0011 31.9 5.0 59 88-151 178-236 (679)
486 3n2o_A ADC, biosynthetic argin 40.7 2.3E+02 0.0078 26.4 12.2 97 51-151 235-344 (648)
487 3alf_A Chitinase, class V; hyd 40.7 52 0.0018 27.9 6.1 36 24-59 97-141 (353)
488 3gv0_A Transcriptional regulat 40.7 1.4E+02 0.0047 23.8 12.4 109 23-150 55-163 (288)
489 4aef_A Neopullulanase (alpha-a 40.6 32 0.0011 31.9 5.1 20 23-42 241-260 (645)
490 3gg8_A Pyruvate kinase; malari 40.5 34 0.0012 30.9 5.0 102 22-148 209-310 (511)
491 3rmj_A 2-isopropylmalate synth 40.4 1.1E+02 0.0037 26.3 8.1 74 82-176 122-196 (370)
492 3fs2_A 2-dehydro-3-deoxyphosph 40.4 1.6E+02 0.0055 24.5 11.9 70 79-153 50-121 (298)
493 2c4w_A 3-dehydroquinate dehydr 40.2 1.2E+02 0.004 23.1 7.1 76 133-221 40-118 (176)
494 3qtg_A Pyruvate kinase, PK; TI 40.1 83 0.0029 28.0 7.3 98 26-148 186-285 (461)
495 3d0c_A Dihydrodipicolinate syn 40.0 1.6E+02 0.0055 24.5 9.7 117 22-172 34-158 (314)
496 1nsj_A PRAI, phosphoribosyl an 39.9 1E+02 0.0036 23.9 7.3 69 24-108 12-83 (205)
497 3l23_A Sugar phosphate isomera 39.7 1.5E+02 0.0052 24.1 9.5 90 48-148 30-125 (303)
498 2bru_C NAD(P) transhydrogenase 39.5 34 0.0012 26.0 4.1 42 101-153 29-72 (186)
499 3lmz_A Putative sugar isomeras 39.5 1.4E+02 0.0047 23.5 9.8 79 89-186 31-109 (257)
500 4djd_D C/Fe-SP, corrinoid/iron 39.5 1.7E+02 0.0059 24.6 9.2 76 50-149 170-251 (323)
No 1
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=100.00 E-value=2.6e-46 Score=319.40 Aligned_cols=252 Identities=37% Similarity=0.657 Sum_probs=229.2
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCc-c---ccCCCCCc
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVD-E---NFGYAAVK 80 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~-~---~~~~~~~~ 80 (273)
|.+|++|.+++|.+. ++++.++.++++||++||++.+++ .+.+++++.++++||++++++.+.. . ..++++++
T Consensus 9 ~~~~~~~~~~~f~~~--~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~ 85 (269)
T 3ngf_A 9 MPRFAANLSTMFNEV--PFLERFRLAAEAGFGGVEFLFPYD-FDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAIS 85 (269)
T ss_dssp CCEEEEETTTSCTTS--CHHHHHHHHHHTTCSEEECSCCTT-SCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCT
T ss_pred CcceeeechhhhccC--CHHHHHHHHHHcCCCEEEecCCcc-CCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCc
Confidence 569999999999998 999999999999999999998876 7899999999999999999886532 1 12234578
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCc
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGY 160 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~ 160 (273)
+.++..++.++++|++|+.+|++.|++++| .+...+ .++.++++++.|++++++|+++||++++||+++..+++.
T Consensus 86 ~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g-~~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~ 160 (269)
T 3ngf_A 86 GREQEFRDNVDIALHYALALDCRTLHAMSG-ITEGLD----RKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGY 160 (269)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCEEECCBC-BCTTSC----HHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTB
T ss_pred cHHHHHHHHHHHHHHHHHHcCCCEEEEccC-CCCCCC----HHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccc
Confidence 889999999999999999999999999998 433221 677899999999999999999999999999887555678
Q ss_pred ccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHH
Q psy13372 161 YLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLA 240 (273)
Q Consensus 161 ~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~ 240 (273)
++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|+|++|+++++.||+ |.+||..+++.|+
T Consensus 161 ~~~~~~~~~~l~---~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~r~~~G~-G~id~~~~~~~L~ 236 (269)
T 3ngf_A 161 FIVHQLEAVGLV---KRVNRPNVAVQLDLYHAQIMDGDLTRLIEKMNGAFSHVQIASVPDRHEPDE-GELNYPYLFSVLE 236 (269)
T ss_dssp SCCCHHHHHHHH---HHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEEEEECCTTTCCCTTS-SSBCHHHHHHHHH
T ss_pred hhcCHHHHHHHH---HHhCCCCCCeEEEhhhHHhhCCCHHHHHHHhhhhEEEEEEecCCCCCCCCC-CccCHHHHHHHHH
Confidence 999999999999 999999999999999999989999999999999999999999989999999 9999999999999
Q ss_pred HcCCCceEEEeeecCCChHHHHHHHHHhh
Q psy13372 241 REGYEGYVGLEYKPQGNTKEGLEEFLKTF 269 (273)
Q Consensus 241 ~~gy~g~~~lE~~~~~~~~~~~~~~~~~~ 269 (273)
+.||+|++++|+.|.++..+|++ ||+++
T Consensus 237 ~~gy~g~i~lE~~p~~~~~~sl~-~l~~~ 264 (269)
T 3ngf_A 237 SVGYRGWVGCEYNPRGKTESGLA-WFAPY 264 (269)
T ss_dssp HTTCCSEEEECCCCSSSGGGGGG-GGGGG
T ss_pred HcCCCceEEEEecCCccHHHHHH-HHHHH
Confidence 99999999999999999999999 99986
No 2
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=100.00 E-value=3.1e-46 Score=316.91 Aligned_cols=254 Identities=32% Similarity=0.574 Sum_probs=227.8
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCc-c---ccCCCCCc
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVD-E---NFGYAAVK 80 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~-~---~~~~~~~~ 80 (273)
|||+|+|++++|... ++++.++.++++||++||++.+++ .+.+++++.++++||++++++.+.+ . ..+.++++
T Consensus 1 mmklg~~~~~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~ 77 (260)
T 1k77_A 1 MPRFAANLSMMFTEV--PFIERFAAARKAGFDAVEFLFPYN-YSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALP 77 (260)
T ss_dssp CCCEEEETTTSSTTS--CGGGHHHHHHHHTCSEEECSCCTT-SCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCT
T ss_pred CceeEeehhhhhcCC--CHHHHHHHHHHhCCCEEEecCCCC-CCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCCh
Confidence 799999997678776 999999999999999999998865 7799999999999999999887532 1 11234578
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCc
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGY 160 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~ 160 (273)
+.++..++.+++.++.|+.+|++.|++++|..+...+ .++.++++++.|++++++|+++||++++||+++..+++.
T Consensus 78 ~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~----~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~ 153 (260)
T 1k77_A 78 GREHEAHADIDLALEYALALNCEQVHVMAGVVPAGED----AERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHY 153 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCSEEECCCCBCCTTSC----HHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTB
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCC----HHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcC
Confidence 8899999999999999999999999999887543322 577899999999999999999999999999976433577
Q ss_pred ccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHH
Q psy13372 161 YLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLA 240 (273)
Q Consensus 161 ~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~ 240 (273)
++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|||++|.+++..||+ |.+||..+++.|+
T Consensus 154 ~~~~~~~~~~l~---~~~~~~~~g~~~D~~h~~~~~~d~~~~l~~~~~~i~~vH~~D~~~r~~~G~-G~id~~~~~~~L~ 229 (260)
T 1k77_A 154 LFSSQYQALAIV---EEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDD-GEINYPWLFRLFD 229 (260)
T ss_dssp SCCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEEEEECCTTTCCCSSS-SSSCHHHHHHHHH
T ss_pred ccCCHHHHHHHH---HHhCCCCEEEEeeHHHHHhhCCCHHHHHHHhhhheeEEEECCCCCCCCCCC-CccCHHHHHHHHH
Confidence 899999999999 999999999999999999999999999999999999999999988999999 9999999999999
Q ss_pred HcCCCceEEEeeecCCChHHHHHHHHHhhc
Q psy13372 241 REGYEGYVGLEYKPQGNTKEGLEEFLKTFD 270 (273)
Q Consensus 241 ~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~ 270 (273)
+.||+|++++|+.+..+..++++ |||++.
T Consensus 230 ~~gy~g~i~~E~~~~~~~~~s~~-~l~~~~ 258 (260)
T 1k77_A 230 EVGYQGWIGCEYKPRGLTEEGLG-WFDAWR 258 (260)
T ss_dssp HTTCCSCEEECCCCSSCTGGGTH-HHHHHH
T ss_pred HcCCCceEEEEeecCCCHHHHHH-HHHhhc
Confidence 99999999999999889999999 999864
No 3
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=100.00 E-value=4.4e-42 Score=295.76 Aligned_cols=253 Identities=18% Similarity=0.194 Sum_probs=218.6
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHH
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKES 84 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
+||||+++ +.+... ++++.++.++++||++||++........+++++.++++||.+++++.+...+. .+++++.|+
T Consensus 25 ~mklg~~~-~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l-~~~d~~~r~ 100 (287)
T 3kws_A 25 ELKLSFQE-GIAPGE--SLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFI-LSTDPAIRK 100 (287)
T ss_dssp CCEEEEET-TSSCCS--SHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCT-TBSSHHHHH
T ss_pred eeeEEEEe-cccCCC--CHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcC-CCCCHHHHH
Confidence 47999998 566666 99999999999999999999873236789999999999999998876432222 236788999
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCC
Q psy13372 85 EFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSS 164 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~ 164 (273)
..++.+++.|+.|+.||++.|++++|........| ..++.++++++.|++++++|+++||++++||++++ .+.++.+
T Consensus 101 ~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p-~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~--~~~~~~~ 177 (287)
T 3kws_A 101 ECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALP-HTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRK--ECFYLRQ 177 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCC-SSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTT--TCSSCCC
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCC-CHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc--cCcccCC
Confidence 99999999999999999999999987543210001 26788999999999999999999999999998754 4668899
Q ss_pred HHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCc--ccHHHHHHHHHHc
Q psy13372 165 FRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGE--IDYAYVFELLARE 242 (273)
Q Consensus 165 ~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~--id~~~i~~~L~~~ 242 (273)
++++.+++ +.+++|++|+++|++|+...+.++.++++.++++|.|||++|++++..||+ |. +||..+++.|++.
T Consensus 178 ~~~~~~ll---~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHlkD~~~r~~pG~-G~d~id~~~i~~~L~~~ 253 (287)
T 3kws_A 178 VADAASLC---RDINNPGVRCMGDFWHMTWEETSDMGAFISGGEYLQHVHVASRKRRSMPGE-DGDADNYINGFKGLKMI 253 (287)
T ss_dssp HHHHHHHH---HHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTTSCSTTT-TGGGCCCHHHHHHHHHT
T ss_pred HHHHHHHH---HHcCCCCeeEEeehHHHHhcCCCHHHHHHHhhhhEEEEEeCCCCCCCCCCC-CCCCcCHHHHHHHHHHc
Confidence 99999999 999999999999999999989999999999999999999999988899999 99 9999999999999
Q ss_pred CCCceEEEeeecCCC----hHHHHHHHHHhh
Q psy13372 243 GYEGYVGLEYKPQGN----TKEGLEEFLKTF 269 (273)
Q Consensus 243 gy~g~~~lE~~~~~~----~~~~~~~~~~~~ 269 (273)
||+|++++|+++..+ ..++++ ||++.
T Consensus 254 gy~g~i~lE~~~~~~~~~~~~~s~~-~l~~~ 283 (287)
T 3kws_A 254 GYNNYVSFECGCQGDRNVVVPAAVK-LLREQ 283 (287)
T ss_dssp TCCSEEEECCCCSSCHHHHHHHHHH-HHHHH
T ss_pred CCCccEEEEecCCCCHHHHHHHHHH-HHHHH
Confidence 999999999987654 456777 77764
No 4
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=100.00 E-value=2.2e-40 Score=285.91 Aligned_cols=241 Identities=17% Similarity=0.215 Sum_probs=202.2
Q ss_pred ccccccccccccccccCHHHHHHHHHHcCCCeEEecCC----CCCCCHHHHHHHHHHcCCeeEEEecC-CccccCCCCCc
Q psy13372 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP----PVGVTLEQLVAAQTRHGLKQVLINTE-VDENFGYAAVK 80 (273)
Q Consensus 6 ~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~----~~~~~~~~~~~~l~~~gL~i~~~~~~-~~~~~~~~~~~ 80 (273)
||+|++++.+......++++.++.++++||++||++.. ......+++++.++++||++++++.+ ...++ .++++
T Consensus 2 Mkigi~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l-~~~d~ 80 (294)
T 3vni_A 2 MKHGIYYAYWEQEWEADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNL-SSPDP 80 (294)
T ss_dssp CCEEEEGGGGCSSSCCCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCT-TCSCH
T ss_pred eeEEEehhhhcCCcCcCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCC-CCCCH
Confidence 89999995444433348999999999999999999953 12245789999999999999985433 22233 23578
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEe--cCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCC
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHI--MSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVP 158 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~--~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~ 158 (273)
+.|+..++.+++.++.|+.||++.|++ ++|.. ...+...+.++.++++++.|++++++|+++||++++||++++ +
T Consensus 81 ~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~--~ 157 (294)
T 3vni_A 81 DIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWP-IDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRF--E 157 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSS-CCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTT--T
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCC-CcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcc--c
Confidence 899999999999999999999999974 44432 000001125678999999999999999999999999998754 4
Q ss_pred CcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHH
Q psy13372 159 GYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFEL 238 (273)
Q Consensus 159 ~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~ 238 (273)
+.++.+++++.+++ +.+++|++|+|+|++|+...+.++.+++++++++|.|+|++|+ +++.||+ |.+||..+++.
T Consensus 158 ~~~~~~~~~~~~l~---~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~-~r~~pG~-G~id~~~~~~~ 232 (294)
T 3vni_A 158 NYLINTAQEGVDFV---KQVDHNNVKVMLDTFHMNIEEDSIGGAIRTAGSYLGHLHTGEC-NRKVPGR-GRIPWVEIGEA 232 (294)
T ss_dssp CSSCCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCT-TSCCTTS-SSCCHHHHHHH
T ss_pred CcccCCHHHHHHHH---HHcCCCCEEEEEEhhhhHHcCCCHHHHHHHhhhhEeEEEeCCC-CCCCCCC-CCcCHHHHHHH
Confidence 67889999999999 9999999999999999999999999999999999999999997 6789999 99999999999
Q ss_pred HHHcCCCceEEEeeecC
Q psy13372 239 LAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 239 L~~~gy~g~~~lE~~~~ 255 (273)
|++.||+|++++|+++.
T Consensus 233 L~~~gy~g~~~lE~~~~ 249 (294)
T 3vni_A 233 LADIGYNGSVVMEPFVR 249 (294)
T ss_dssp HHHTTCCSCEEECCCCC
T ss_pred HHHhCCCCcEEEEeccC
Confidence 99999999999998754
No 5
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=100.00 E-value=8.8e-41 Score=285.34 Aligned_cols=252 Identities=14% Similarity=0.154 Sum_probs=211.8
Q ss_pred CCcccccccccccccccccCHHHHHHHHHHcCCCeEEecCC-CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCch
Q psy13372 3 APSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP-PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKG 81 (273)
Q Consensus 3 ~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~ 81 (273)
|.|||+|+|+++++.+. ++++.++.++++||++||++.+ ....+.+++++.++++||++++++... ++ .+++++
T Consensus 2 m~~~~lg~~~~~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--~~-~~~d~~ 76 (275)
T 3qc0_A 2 MQVEGLSINLATIREQC--GFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGG--FF-PAPDAS 76 (275)
T ss_dssp CCCTTEEEEGGGGTTTC--CHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEE--CC-CCSSHH
T ss_pred CCcccceeeeeeccCCC--CHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCC--Cc-CCCCHH
Confidence 45789999996665777 9999999999999999999874 123678999999999999999877531 22 345788
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCC-CCCCc
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-SVPGY 160 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~-~~~~~ 160 (273)
.++..++.+++.|+.|+.||++.|++++|..+... .+.++.++++++.|++++++|+++||++++||+++. .+++.
T Consensus 77 ~r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~---~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~ 153 (275)
T 3qc0_A 77 GREKAIDDNRRAVDEAAELGADCLVLVAGGLPGGS---KNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRA 153 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTC---CCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTB
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCC---cCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCcc
Confidence 99999999999999999999999999998654320 126778999999999999999999999999997542 12456
Q ss_pred ccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcC--CcceeEEeccC--------CCCCCCCCCCcc
Q psy13372 161 YLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACR--DLIGHVQIAQA--------PDRQEPHARGEI 230 (273)
Q Consensus 161 ~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~--~~i~~vHi~d~--------~~~~~~g~~G~i 230 (273)
++.+++++.+++ +.+++ ++|+++|++|+.. ++++.+.+++++ ++|.|+|++|. +++..||+ |.+
T Consensus 154 ~~~~~~~~~~l~---~~~~~-~vg~~~D~~h~~~-~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~r~~~G~-G~i 227 (275)
T 3qc0_A 154 CVNTLGQALDIC---ETLGP-GVGVAIDVYHVWW-DPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMMGD-GVI 227 (275)
T ss_dssp SCCCHHHHHHHH---HHHCT-TEEEEEEHHHHTT-CTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCTTS-SCC
T ss_pred ccCCHHHHHHHH---HHhCc-ccEEEEEhhhhee-CCCHHHHHHHcCccceEEEEEecCCCCCcccccCCCcCCCC-Ccc
Confidence 899999999999 99998 9999999999987 689999999998 69999999995 24568999 999
Q ss_pred cHHHHHHHHHHcCCCceEEEeeecC-----CChH----HHHHHHHHhh
Q psy13372 231 DYAYVFELLAREGYEGYVGLEYKPQ-----GNTK----EGLEEFLKTF 269 (273)
Q Consensus 231 d~~~i~~~L~~~gy~g~~~lE~~~~-----~~~~----~~~~~~~~~~ 269 (273)
||..+++.|++.||+|++++|+.+. .++. ++++ |+|++
T Consensus 228 d~~~~~~~L~~~gy~g~~~~E~~~~~~~~~~~~~~~~~~~~~-~l~~~ 274 (275)
T 3qc0_A 228 DLKGIRRRIEAAGFHGAQEVEIFSADNWWKRPADEVIATCVE-RYRNC 274 (275)
T ss_dssp CHHHHHHHHHHTTCCCCEEECCCBTTTGGGSCHHHHHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHcCCCceEEEEecCccccccCCHHHHHHHHHH-HhcCC
Confidence 9999999999999999999998765 3544 4555 55543
No 6
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=100.00 E-value=1.1e-39 Score=280.63 Aligned_cols=238 Identities=16% Similarity=0.199 Sum_probs=202.5
Q ss_pred cccccccccccccc-cccCHHHHHHHHHHcCCCeEEecCCCC-C---CCHHHHHHHHHHcCCeeEEEec-CCccccCCCC
Q psy13372 5 SFKLAANLTLLFND-LAANYLDKYRVAAELGFRYIESWFPPV-G---VTLEQLVAAQTRHGLKQVLINT-EVDENFGYAA 78 (273)
Q Consensus 5 ~~k~~~~~~~~~~~-~~~~~~~~l~~~~~~G~~~vEl~~~~~-~---~~~~~~~~~l~~~gL~i~~~~~-~~~~~~~~~~ 78 (273)
|||+|+++ +.|.. ...++++.++.++++||++||++.... . ...+++++.++++||++++++. +...+. .++
T Consensus 1 Mmkig~~~-~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l-~~~ 78 (290)
T 2qul_A 1 MNKVGMFY-TYWSTEWMVDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDF-ASP 78 (290)
T ss_dssp CCCEEEET-TSSCSSSCCCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCT-TCS
T ss_pred CcceeEEe-eeecCcccccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCC-CCC
Confidence 79999999 45543 334899999999999999999997531 1 3578999999999999998653 211222 235
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecC----CC--CCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMS----GK--TESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~----G~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+++.|+..++.++++++.|+.||++.|+++. |. .... ...++.++++++.|++++++|+++||++++||+
T Consensus 79 d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~----~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~ 154 (290)
T 2qul_A 79 DKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDM----KDKRPYVDRAIESVRRVIKVAEDYGIIYALEVV 154 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTC----CCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCc----ccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 7888999999999999999999999998643 43 1111 126788999999999999999999999999998
Q ss_pred CCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccH
Q psy13372 153 NQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDY 232 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~ 232 (273)
+++ ++.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|+|++|+ .+..||+ |.+||
T Consensus 155 ~~~--~~~~~~~~~~~~~l~---~~~~~~~~g~~~D~~h~~~~g~d~~~~l~~~~~~i~~vH~~D~-~~~~~G~-G~id~ 227 (290)
T 2qul_A 155 NRF--EQWLCNDAKEAIAFA---DAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMGHFHLGEA-NRLPPGE-GRLPW 227 (290)
T ss_dssp CTT--TCSSCCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHHCSCHHHHHHHTTTTEEEEEECCT-TSCCTTS-SCSCH
T ss_pred ccc--cccccCCHHHHHHHH---HHcCCCCEEEEEEchhhhhcCCCHHHHHHHHHhheeEEEEccC-CCCCCCC-CCcCH
Confidence 753 456889999999999 9999999999999999999899999999999999999999997 5678999 99999
Q ss_pred HHHHHHHHHcCCCceEEEeeecC
Q psy13372 233 AYVFELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 233 ~~i~~~L~~~gy~g~~~lE~~~~ 255 (273)
..+++.|++.||+|++++|+.+.
T Consensus 228 ~~~~~~L~~~gy~g~~~lE~~~~ 250 (290)
T 2qul_A 228 DEIFGALKEIGYDGTIVMEPFMR 250 (290)
T ss_dssp HHHHHHHHHTTCCSCEEECCCCC
T ss_pred HHHHHHHHHhCCCceEEEEecCc
Confidence 99999999999999999998765
No 7
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=100.00 E-value=1.3e-39 Score=278.26 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=210.8
Q ss_pred ccccccccccccccccCHHHHHHHHHHcCCCeEEec-CCC-----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCC
Q psy13372 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESW-FPP-----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAV 79 (273)
Q Consensus 6 ~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~-~~~-----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~ 79 (273)
||+|+|+++++... ++++.++.++++||++||++ ... +....+++++.++++||++++++.+. ++. +++
T Consensus 1 Mklg~~~~~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--~~~-~~~ 75 (278)
T 1i60_A 1 MKLCFNEATTLENS--NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALV--FFN-NRD 75 (278)
T ss_dssp CEEEEEGGGGTTTC--CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEE--CCS-SCC
T ss_pred CeeEechhhcccCC--CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeecccc--ccc-cCC
Confidence 79999996546666 99999999999999999999 541 23678999999999999999887753 221 247
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCC
Q psy13372 80 KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPG 159 (273)
Q Consensus 80 ~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~ 159 (273)
++.++..++.+++.++.|+.+|++.|++++|...... +.++.++++++.|++++++|+++||++++||+++. .
T Consensus 76 ~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~----~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~---~ 148 (278)
T 1i60_A 76 EKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKI----VKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHP---Q 148 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCC----CHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCT---T
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCC----CHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCc---c
Confidence 8888999999999999999999999999887643221 14778999999999999999999999999998652 2
Q ss_pred cccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCC----------CCCCCCCc
Q psy13372 160 YYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDR----------QEPHARGE 229 (273)
Q Consensus 160 ~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~----------~~~g~~G~ 229 (273)
.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|+|++|..+. ..||+ |.
T Consensus 149 ~~~~~~~~~~~l~---~~~~~~~~g~~~D~~h~~~~g~d~~~~~~~~~~~i~~vHl~D~~~~~~g~~~~~~~~~~G~-G~ 224 (278)
T 1i60_A 149 CTVNTFEQAYEIV---NTVNRDNVGLVLDSFHFHAMGSNIESLKQADGKKIFIYHIDDTEDFPIGFLTDEDRVWPGQ-GA 224 (278)
T ss_dssp BSSCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECEECCCCTTTCCGGGEESTTS-SS
T ss_pred chhcCHHHHHHHH---HHhCCCCeeEEEEeEEEeecCCCHHHHHhcCcceEEEEEecCCCCCCccchhhccCCCCCC-CC
Confidence 2789999999999 9999999999999999999999999999999999999999996432 36899 99
Q ss_pred ccHHHHHHHHHHcCCCceEEEeeecC----CC----hHHHHHHHHHhh
Q psy13372 230 IDYAYVFELLAREGYEGYVGLEYKPQ----GN----TKEGLEEFLKTF 269 (273)
Q Consensus 230 id~~~i~~~L~~~gy~g~~~lE~~~~----~~----~~~~~~~~~~~~ 269 (273)
+||..+++.|++.||+|++++|+.+. .+ ..++++ |+++.
T Consensus 225 id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~-~l~~~ 271 (278)
T 1i60_A 225 IDLDAHLSALKEIGFSDVVSVELFRPEYYKLTAEEAIQTAKK-TTVDV 271 (278)
T ss_dssp SCHHHHHHHHHHTTCCSEEEECCCCGGGGGSCHHHHHHHHHH-HHHHH
T ss_pred CcHHHHHHHHHHcCCCceEEEEecCcccccCCHHHHHHHHHH-HHHHH
Confidence 99999999999999999999998753 23 456666 77764
No 8
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=1.9e-39 Score=277.89 Aligned_cols=249 Identities=17% Similarity=0.124 Sum_probs=205.0
Q ss_pred CcccccccccccccccccCHHHHHHHHHHcCCCeEEecCCC-----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCC
Q psy13372 4 PSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPP-----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAA 78 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~ 78 (273)
..||+|+|+ ++|.+. ++++.++.++++||++||++... ...+.+++++.++++||++++++.+. ++ ..
T Consensus 2 ~~Mk~~~~~-~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~--~~--~~ 74 (281)
T 3u0h_A 2 NAMEPCLHP-TLVDET--SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPL--NL--YD 74 (281)
T ss_dssp -CCEEEECG-GGTTCC--CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCS--CT--TS
T ss_pred Ccchhhhcc-hhccCC--CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccc--cc--cC
Confidence 369999999 788887 99999999999999999999641 12568999999999999999887653 22 22
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCC---
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQH--- 155 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~--- 155 (273)
..+.++..++.+++.|+.|+.||++.|+++.+.. .... .++.++++++.|++++++|+++||++++||+++.
T Consensus 75 ~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~p~-~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~ 149 (281)
T 3u0h_A 75 SEPVFLRELSLLPDRARLCARLGARSVTAFLWPS-MDEE----PVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLR 149 (281)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHTTCCEEEEECCSE-ESSC----HHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGC
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecCC-CCCc----chhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 2334667789999999999999999998643211 1111 4568999999999999999999999999998631
Q ss_pred CCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCC---------CCCCCC
Q psy13372 156 SVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPD---------RQEPHA 226 (273)
Q Consensus 156 ~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~---------~~~~g~ 226 (273)
..++.++.+++++.+++ +.+++|++|+++|++|+...+.++.+.++.++++|.|+|++|... +..||+
T Consensus 150 ~~~~~~~~~~~~~~~l~---~~v~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~G~ 226 (281)
T 3u0h_A 150 HRRYPFVQSLADLKTFW---EAIGAPNVGALVDSYHWYTAGEHEDDLAQLPPEKVVYVHINDTRDAPEDAHDGKRLLPGD 226 (281)
T ss_dssp CSSEECCCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECBCSSCTTTCCTTSCBCTTS
T ss_pred cccccccCCHHHHHHHH---HHcCCCCeeEEeehhHHHHcCCCHHHHHhcCcccEEEEEecCCCCCcccchhccCcCCCC
Confidence 01345789999999999 999999999999999999999999999999999999999999754 568999
Q ss_pred CCcccHHHHHHHHHHcCCCceEEEeeecC----CC----hHHHHHHHHHhh
Q psy13372 227 RGEIDYAYVFELLAREGYEGYVGLEYKPQ----GN----TKEGLEEFLKTF 269 (273)
Q Consensus 227 ~G~id~~~i~~~L~~~gy~g~~~lE~~~~----~~----~~~~~~~~~~~~ 269 (273)
|.+||..+++.|++.||+||+++|+... .+ ..++++ ++++.
T Consensus 227 -G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~-~l~~~ 275 (281)
T 3u0h_A 227 -GRIPLVPFLRGLYLAGYRGPVAAEVLHETPLDGTGESRARLVRE-RLEKL 275 (281)
T ss_dssp -SSSCHHHHHHHHHHHTCCSEEEECCCCSSCCSSCHHHHHHHHHH-HHHHH
T ss_pred -cCcCHHHHHHHHHHcCCCCcEEEEecChhhccCCHHHHHHHHHH-HHHHH
Confidence 9999999999999999999999998632 23 345555 66654
No 9
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=100.00 E-value=2.4e-38 Score=275.31 Aligned_cols=237 Identities=17% Similarity=0.151 Sum_probs=199.7
Q ss_pred ccccccccccccc--cccCHHHHHHHHHHcCCCeEEecCC--CC--CCCHHHHHHHHHHcCCeeEEEecCC-ccccCCCC
Q psy13372 6 FKLAANLTLLFND--LAANYLDKYRVAAELGFRYIESWFP--PV--GVTLEQLVAAQTRHGLKQVLINTEV-DENFGYAA 78 (273)
Q Consensus 6 ~k~~~~~~~~~~~--~~~~~~~~l~~~~~~G~~~vEl~~~--~~--~~~~~~~~~~l~~~gL~i~~~~~~~-~~~~~~~~ 78 (273)
||+|+++ +.|.. ...++++ ++.++++||++||++.. .. ....+++++.++++||+++++..+. ..+. .++
T Consensus 21 mklg~~~-~~~~~~~~~~~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l-~~~ 97 (309)
T 2hk0_A 21 MKHGIYY-SYWEHEWSAKFGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNL-SSE 97 (309)
T ss_dssp CEEEEEG-GGGCSCTTSCSHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCS-SCS
T ss_pred ceeEEeh-hhcccccccccHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCC-CCC
Confidence 8999998 45543 1138999 99999999999999864 22 1357899999999999999954221 1222 235
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecC----CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMS----GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~----G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+++.|+..++.+++.++.|+.||++.|++++ |...... ...++.++++++.|++++++|+++||++++||+++
T Consensus 98 d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~---~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~ 174 (309)
T 2hk0_A 98 DAAVRAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQP---VDKAGDYARGVEGINGIADFANDLGINLCIEVLNR 174 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSC---CCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCc---CChHHHHHHHHHHHHHHHHHHHHcCCEEEEeeccc
Confidence 7788999999999999999999999999765 3321110 02577899999999999999999999999999875
Q ss_pred CCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHH
Q psy13372 155 HSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAY 234 (273)
Q Consensus 155 ~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~ 234 (273)
+ ++.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|||++|. ++..||+ |.+||..
T Consensus 175 ~--~~~~~~~~~~~~~l~---~~v~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~~i~~vHl~D~-~r~~~G~-G~id~~~ 247 (309)
T 2hk0_A 175 F--ENHVLNTAAEGVAFV---KDVGKNNVKVMLDTFHMNIEEDSFGDAIRTAGPLLGHFHTGES-NRRVPGK-GRMPWHE 247 (309)
T ss_dssp T--TCSSCCSHHHHHHHH---HHHTCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCT-TSCCTTS-SCCCHHH
T ss_pred c--cccccCCHHHHHHHH---HHcCCCCeEEEEehhhHhhcCcCHHHHHHHHHhhEEEEEeCCC-CCCCCcC-CccCHHH
Confidence 4 467899999999999 9999999999999999999999999999999999999999998 5788999 9999999
Q ss_pred HHHHHHHcCCCceEEEeeecC
Q psy13372 235 VFELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 235 i~~~L~~~gy~g~~~lE~~~~ 255 (273)
+++.|++.||+|++++|+.+.
T Consensus 248 ~~~~L~~~gy~g~i~lE~~~~ 268 (309)
T 2hk0_A 248 IGLALRDINYTGAVIMEPFVK 268 (309)
T ss_dssp HHHHHHHTTCCSEEEECCCCC
T ss_pred HHHHHHHcCCCCcEEEEecCC
Confidence 999999999999999998765
No 10
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=100.00 E-value=1.3e-38 Score=276.71 Aligned_cols=248 Identities=12% Similarity=0.091 Sum_probs=205.0
Q ss_pred CcccccccccccccccccCHHHHHHHHHHcCCCeEEecCC-------CC-------CCCHHHHHHHHHHcCCeeEEEecC
Q psy13372 4 PSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP-------PV-------GVTLEQLVAAQTRHGLKQVLINTE 69 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-------~~-------~~~~~~~~~~l~~~gL~i~~~~~~ 69 (273)
+.||+|++++++......++++.++.++++||++||++.. ++ ..++++++++++++||++++++.+
T Consensus 19 ~~~~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~ 98 (305)
T 3obe_A 19 AGKKMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLT 98 (305)
T ss_dssp CCCCCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCC
T ss_pred cCCceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeecc
Confidence 5689999995554443459999999999999999999953 12 127899999999999999988764
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 70 VDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
.. .. +.+++.++..++.+++.|+.|+.||++.|+++ |..... .++.|+++++.|++++++|+++||++++
T Consensus 99 ~~--~~-~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~------~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 168 (305)
T 3obe_A 99 PS--LR-EYTKENMPKFDEFWKKATDIHAELGVSCMVQP-SLPRIE------NEDDAKVVSEIFNRAGEITKKAGILWGY 168 (305)
T ss_dssp CS--CC-CCCGGGHHHHHHHHHHHHHHHHHHTCSEEEEC-CCCCCS------SHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred cc--cc-ccchhhHHHHHHHHHHHHHHHHHcCCCEEEeC-CCCCCC------CHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 31 11 13567788889999999999999999999985 432211 5678999999999999999999999999
Q ss_pred ccCCCCCCCCcc----------------cCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeE
Q psy13372 150 EPVNQHSVPGYY----------------LSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHV 213 (273)
Q Consensus 150 E~~~~~~~~~~~----------------~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~v 213 (273)
||++.. ...+ ..+.+.+..++ +.++++++|+++|++|+...|.|+.+.++.++++|.||
T Consensus 169 En~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~vg~~lD~~H~~~~g~d~~~~i~~~~~ri~~v 243 (305)
T 3obe_A 169 HNHSNE--FKRVLKAGEKPEQNPNPWAPPKGTYIEELFL---KNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLL 243 (305)
T ss_dssp ECCSGG--GSEECCTTCCCC--------CCSEEHHHHHH---HHSCTTTEEEEEEHHHHHHTTCCHHHHHHHSTTTEEEE
T ss_pred ecCccc--ccccccccccccccccccccCCChHHHHHHH---HhCCcccEEEEEeHHHHHHcCCCHHHHHHHhhCceeEE
Confidence 998642 0111 15667777888 99999999999999999999999999999999999999
Q ss_pred EeccCCCCCCCC-CCCcccHHHHHHHHHHcCCCceEEEeeecC---C----ChHHHHHHHHHhhccc
Q psy13372 214 QIAQAPDRQEPH-ARGEIDYAYVFELLAREGYEGYVGLEYKPQ---G----NTKEGLEEFLKTFDLK 272 (273)
Q Consensus 214 Hi~d~~~~~~~g-~~G~id~~~i~~~L~~~gy~g~~~lE~~~~---~----~~~~~~~~~~~~~~~~ 272 (273)
|++| +..|| + |.+||..+++.|++.||+|++ +|++.. . ...++++ ||++.+|.
T Consensus 244 HlkD---~~~~G~~-G~id~~~i~~~L~~~gy~G~i-iE~~~~~~~~~~~~~~~~s~~-~L~~~~~~ 304 (305)
T 3obe_A 244 HIKD---RWIIGDS-GMMNFPNIFKKAYEIGILGYY-VELEGDKKGRTQFEGVEKSAA-YLQAAPFV 304 (305)
T ss_dssp EECC---SSSTTCS-SSBCHHHHHHHHHHHTCCEEE-ECCCCCSSSCCHHHHHHHHHH-HHHHCTTC
T ss_pred Eecc---CcCCCCC-CccCHHHHHHHHHHcCCCEEE-EEecCCcCCCCHHHHHHHHHH-HHHHcCCC
Confidence 9999 68899 8 999999999999999999999 998632 2 3568888 99998763
No 11
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=100.00 E-value=3.6e-39 Score=277.22 Aligned_cols=243 Identities=17% Similarity=0.253 Sum_probs=207.1
Q ss_pred ccccccccccccc--cccCHHHHHHHHHHcCCCeEEecCCC-------CCCCHHHHHHHHHHcCCeeEEEecCCccccCC
Q psy13372 6 FKLAANLTLLFND--LAANYLDKYRVAAELGFRYIESWFPP-------VGVTLEQLVAAQTRHGLKQVLINTEVDENFGY 76 (273)
Q Consensus 6 ~k~~~~~~~~~~~--~~~~~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~ 76 (273)
||+|+|+ +.|.+ . ++++.++.++++||++||++.++ +....+++++.++++||++++++.+.. .
T Consensus 1 Mklg~~~-~~~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~----~ 73 (286)
T 3dx5_A 1 MKYSLCT-ISFRHQLI--SFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLD----I 73 (286)
T ss_dssp CEEEEEG-GGGTTSCC--CHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCC----C
T ss_pred CeEEEEe-eeccCCCC--CHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCC----C
Confidence 8999999 56655 6 99999999999999999998542 124578999999999999999875421 1
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCC
Q psy13372 77 AAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHS 156 (273)
Q Consensus 77 ~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~ 156 (273)
++++.++..++.+++.++.|+.||++.|++++|..+.... .++.++++++.|++++++|+++||++++||+
T Consensus 74 -~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~----~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~---- 144 (286)
T 3dx5_A 74 -SLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSADF----SQQERQEYVNRIRMICELFAQHNMYVLLETH---- 144 (286)
T ss_dssp -STTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGS----CHHHHHHHHHHHHHHHHHHHHTTCEEEEECC----
T ss_pred -CCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccC----cHHHHHHHHHHHHHHHHHHHHhCCEEEEecC----
Confidence 3456678889999999999999999999999987643211 5678999999999999999999999999996
Q ss_pred CCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCC---------------
Q psy13372 157 VPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDR--------------- 221 (273)
Q Consensus 157 ~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~--------------- 221 (273)
++.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|+|++|+..+
T Consensus 145 -~~~~~~~~~~~~~l~---~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~~~~ 220 (286)
T 3dx5_A 145 -PNTLTDTLPSTLELL---GEVDHPNLKINLDFLHIWESGADPVDSFQQLRPWIQHYHFKNISSADYLHVFEPNNVYAAA 220 (286)
T ss_dssp -TTSTTSSHHHHHHHH---HHHCCTTEEEEEEHHHHHHTTCCHHHHHHHHGGGEEEEEECEESCGGGGGGGSHHHHHSTT
T ss_pred -CCcCcCCHHHHHHHH---HhcCCCCeEEEeccccHhhcCCCHHHHHHHHHhHheEEEecCCcccccccccCcccccccc
Confidence 356889999999999 9999999999999999999999999999999999999999997542
Q ss_pred ------CCCCCCCcccHHHHHHHHHHcCCCceEEEeeecC---CChHHHHHHHHHhhccc
Q psy13372 222 ------QEPHARGEIDYAYVFELLAREGYEGYVGLEYKPQ---GNTKEGLEEFLKTFDLK 272 (273)
Q Consensus 222 ------~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~---~~~~~~~~~~~~~~~~~ 272 (273)
.+||+ |.+||..+++.|++. +|++++|+.+. +...++++ |||+...+
T Consensus 221 g~~~~~~~~G~-G~id~~~i~~~L~~~--~g~~~lE~~~~d~~~~~~~s~~-~Lr~~~~~ 276 (286)
T 3dx5_A 221 GNRTGMVPLFE-GIVNYDEIIQEVRDT--DHFASLEWFGHNAKDILKAEMK-VLTNRNLE 276 (286)
T ss_dssp CCCTTEECGGG-SSSCHHHHHHHHTTS--SCEEEECCCSSCHHHHHHHHHH-HHHHCC--
T ss_pred CcceeeeccCC-CcCCHHHHHHHHHhc--CCCEEEEEeCCCHHHHHHHHHH-HHHhcCce
Confidence 25799 999999999999998 99999998753 24668899 99987543
No 12
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=100.00 E-value=1.4e-38 Score=274.82 Aligned_cols=248 Identities=18% Similarity=0.187 Sum_probs=207.4
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCC----------CCCHHHHHHHHHHcCCeeEEEecCCc--c
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPV----------GVTLEQLVAAQTRHGLKQVLINTEVD--E 72 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~----------~~~~~~~~~~l~~~gL~i~~~~~~~~--~ 72 (273)
++|+|++++.+.... ++++.++.++++||++||++.+.. ....+++++.++++||++++++.+.. .
T Consensus 16 ~~~~gi~~~~~~~~~--~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~ 93 (295)
T 3cqj_A 16 QIPLGIYEKALPAGE--CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRF 93 (295)
T ss_dssp CCCEEEEGGGSCCCS--CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTS
T ss_pred cccceeeeecCCCCC--CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCC
Confidence 479999995554456 999999999999999999986521 12367899999999999998875422 1
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 73 NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+++ +++++.|+..++.++++++.|+.||++.|+++++..... ...++.++++++.|++++++|+++||++++||+
T Consensus 94 ~l~-~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~----~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~ 168 (295)
T 3cqj_A 94 PLG-SEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQ----EANNETRRRFRDGLKESVEMASRAQVTLAMEIM 168 (295)
T ss_dssp CTT-CSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCSSS----CCCHHHHHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCC-CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCCCcC----cCHHHHHHHHHHHHHHHHHHHHHhCCEEEEeeC
Confidence 221 357888999999999999999999999999975433111 126788999999999999999999999999997
Q ss_pred CCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccC-CC--CC-CCCCCC
Q psy13372 153 NQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQA-PD--RQ-EPHARG 228 (273)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~-~~--~~-~~g~~G 228 (273)
+ +.++.+++++.+++ +.+++|++|+|+|++|+...+.|+.+.++.++++|.|||++|. ++ ++ ++|+ |
T Consensus 169 ~-----~~~~~~~~~~~~l~---~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~g~~~~~p~G~-G 239 (295)
T 3cqj_A 169 D-----YPLMNSISKALGYA---HYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGE-G 239 (295)
T ss_dssp S-----SGGGCSHHHHHHHH---HHHCCTTEEEECBHHHHHSSSCCHHHHHHHTGGGBCCEEECEEETTEEEEECTTS-S
T ss_pred C-----CcccCCHHHHHHHH---HhcCCCCeEEEeccchHhhcCCCHHHHHHHhccceEEEEeecCCCCccCCcCCCC-C
Confidence 4 45789999999999 9999999999999999998899999999999999999999996 44 34 4599 9
Q ss_pred cccHHHHHHHHHHcCCCceEEEeeecC--CC----hHHHHHHHHHhh
Q psy13372 229 EIDYAYVFELLAREGYEGYVGLEYKPQ--GN----TKEGLEEFLKTF 269 (273)
Q Consensus 229 ~id~~~i~~~L~~~gy~g~~~lE~~~~--~~----~~~~~~~~~~~~ 269 (273)
.+||..+++.|++.||+|++++|+.+. .+ ..++++ |+++.
T Consensus 240 ~id~~~~~~~L~~~gy~g~i~lE~~~~~~~~~~~~~~~s~~-~l~~~ 285 (295)
T 3cqj_A 240 VVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVAKARD-WVKAR 285 (295)
T ss_dssp SCCHHHHHHHHHHTTCCSCEEECCCGGGSSCHHHHHHHHHH-HHHHH
T ss_pred ccCHHHHHHHHHHCCCceeEEEEecCCCCCCHHHHHHHHHH-HHHHH
Confidence 999999999999999999999998754 33 456777 77764
No 13
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=100.00 E-value=2.5e-38 Score=274.58 Aligned_cols=248 Identities=13% Similarity=0.108 Sum_probs=199.9
Q ss_pred Cccccccccccccccccc-CHHHHHHHHHHcCCCeEEecC-----CCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCC
Q psy13372 4 PSFKLAANLTLLFNDLAA-NYLDKYRVAAELGFRYIESWF-----PPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYA 77 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~-~~~~~l~~~~~~G~~~vEl~~-----~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~ 77 (273)
..||+|++++++...... ++++.++.++++||++||++. +++ .+++++++.++++||++++++.+.......+
T Consensus 11 ~~~~~g~~~~s~~~~~~~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~-~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~ 89 (303)
T 3l23_A 11 AGKEIGLQIYSLSQELYKGDVAANLRKVKDMGYSKLELAGYGKGAIGG-VPMMDFKKMAEDAGLKIISSHVNPVDTSISD 89 (303)
T ss_dssp -CCCCEEEGGGGGGGGGSSCHHHHHHHHHHTTCCEEEECCEETTEETT-EEHHHHHHHHHHTTCEEEEEECCCBCTTCSS
T ss_pred cCCceEEEEEEchhhhccCCHHHHHHHHHHcCCCEEEeccccCcccCC-CCHHHHHHHHHHcCCeEEEEecccccccccC
Confidence 348999999555554444 899999999999999999986 233 6789999999999999999886531111011
Q ss_pred C--------CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--E
Q psy13372 78 A--------VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--A 147 (273)
Q Consensus 78 ~--------~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i 147 (273)
+ .++.++..++.++++|+.|+.||++.|+++.+.. .. .++.++++++.|++++++|+++||+ +
T Consensus 90 p~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~~~-~~------~~~~~~~~~~~l~~l~~~a~~~Gv~~~l 162 (303)
T 3l23_A 90 PFKAMIFKYSKEVTPKIMEYWKATAADHAKLGCKYLIQPMMPT-IT------THDEAKLVCDIFNQASDVIKAEGIATGF 162 (303)
T ss_dssp TTTTBCCSCCTTTHHHHHHHHHHHHHHHHHTTCSEEEECSCCC-CC------SHHHHHHHHHHHHHHHHHHHHTTCTTCE
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEECCCCC-CC------CHHHHHHHHHHHHHHHHHHHHCCCcceE
Confidence 1 1234688899999999999999999999964321 11 5778999999999999999999999 9
Q ss_pred EEccCCCCCCCCcccC-------------------CHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCC
Q psy13372 148 LIEPVNQHSVPGYYLS-------------------SFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRD 208 (273)
Q Consensus 148 ~lE~~~~~~~~~~~~~-------------------~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~ 208 (273)
++||++.. ...+. +.+....++ +.+++|++|+++|++|++..|.|+.++++++++
T Consensus 163 ~~En~~~e---~~~~~t~~~~~~~g~~~~~~~~~~~~~~~~~l~---~~~~~~~v~~~~D~~h~~~~g~d~~~~i~~~~~ 236 (303)
T 3l23_A 163 GYHNHNME---FNRVATKEQQEKVKGNPFAAFMKVGDQIYDLML---KDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPD 236 (303)
T ss_dssp EEECCSGG---GSEECCTTTC----------CCCCSEEHHHHHH---HHSCTTTEEEEEEHHHHHHTTCCHHHHHHHCTT
T ss_pred EEccCcce---eecccccccccccccccccccccCchHHHHHHH---HhCCchhEEEEEehHHHHHcCCCHHHHHHHhcC
Confidence 99998621 11111 334445567 889989999999999999999999999999999
Q ss_pred cceeEEeccCCCCCCCC-CCCcccHHHHHHHHHHcCCCceEEEeeecC---C----ChHHHHHHHHHhhcc
Q psy13372 209 LIGHVQIAQAPDRQEPH-ARGEIDYAYVFELLAREGYEGYVGLEYKPQ---G----NTKEGLEEFLKTFDL 271 (273)
Q Consensus 209 ~i~~vHi~d~~~~~~~g-~~G~id~~~i~~~L~~~gy~g~~~lE~~~~---~----~~~~~~~~~~~~~~~ 271 (273)
||.|+|++| +.+|| + |.+||+.++++|++.||+||+ +|++.. . ...+|++ |||+.++
T Consensus 237 ri~~vH~kD---~~~~G~~-G~id~~~i~~~L~~~gy~G~i-vE~~~~~~~~~p~~~~~~s~~-~l~~~~~ 301 (303)
T 3l23_A 237 RIKVLHIKD---RAVFGQS-GMMNFEMIFKQMYANGIKDYF-VELEQMPDGRTQFAGVKDCAD-YLIKAPF 301 (303)
T ss_dssp TEEEEEECC---SSSTTSS-SCCCHHHHHHHHHHHTCCCEE-ECCCCCTTSCCHHHHHHHHHH-HHHHCTT
T ss_pred cEEEEEecC---CcCCCCC-CccCHHHHHHHHHHcCCCEEE-EEecCCccCCCHHHHHHHHHH-HHHHcCC
Confidence 999999998 78999 8 999999999999999999999 998743 2 3567888 9998875
No 14
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=100.00 E-value=1.2e-38 Score=278.06 Aligned_cols=257 Identities=19% Similarity=0.176 Sum_probs=207.9
Q ss_pred CcccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCC-CC--------CHHHHHHHHHHcCCeeEEEecC-Ccc-
Q psy13372 4 PSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPV-GV--------TLEQLVAAQTRHGLKQVLINTE-VDE- 72 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~-~~--------~~~~~~~~l~~~gL~i~~~~~~-~~~- 72 (273)
++||||+|+.+.......+.+.+++.++++||++||++.... .. .++++++.++++||++++++.. .+.
T Consensus 18 ~~~~lgi~~~~~~~~~~~~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~ 97 (316)
T 3qxb_A 18 QGMKLGVNLCFAVKRWLEPDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTFGGLASYT 97 (316)
T ss_dssp -CCCEEEEGGGGTTTSCSHHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHT
T ss_pred ccccceecchHHHhccCCHHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEEeeccccccc
Confidence 568999999655555534567778999999999999986522 12 5789999999999999987542 111
Q ss_pred --ccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EE
Q psy13372 73 --NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLT-AL 148 (273)
Q Consensus 73 --~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~ 148 (273)
++ .+++++.|+.+++.++++|+.|+.||++.|++++|..... ...+...++.++++++.|++++++|+++||+ ++
T Consensus 98 ~~~l-~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~ 176 (316)
T 3qxb_A 98 YNHF-LAPTLELQSLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLY 176 (316)
T ss_dssp SCBT-TCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 23 3467889999999999999999999999999887752110 0001114567899999999999999999999 99
Q ss_pred EccCCCCCCCCcccCCHHHHHHHHHHHhhc---CCCceeEeeecccccc-----cCCChHHHHHhcCCcceeEEeccCCC
Q psy13372 149 IEPVNQHSVPGYYLSSFRVAERLIRELRAH---GISNVQLQFDFFNAQR-----ICGDLTHTFGACRDLIGHVQIAQAPD 220 (273)
Q Consensus 149 lE~~~~~~~~~~~~~~~~~~~~li~~~~~~---~~~~~g~~~D~~h~~~-----~~~~~~~~i~~~~~~i~~vHi~d~~~ 220 (273)
+||++. ...++.|++++.+++ +.+ ++|++|+|+|++|+.. .+.++.++++.++++|.|||++|+.+
T Consensus 177 lE~~~~---~~~~~~t~~~~~~l~---~~v~~~~~~~vg~~lD~~H~~~~~~~~~~~d~~~~l~~~~~~i~~vHlkD~~~ 250 (316)
T 3qxb_A 177 VEPVPL---ATEFPSSAADAARLM---ADLDGRTEIPVRLLVDWGHALFEPLFGPEADMDHWMDLCQPWIAAYHIQQTDG 250 (316)
T ss_dssp ECCCSC---TTBSSCSHHHHHHHH---HHHTTTSSSCEEEEEEHHHHTCHHHHGGGCSHHHHHHHHGGGEEEEEECBCCS
T ss_pred EEecCC---ccccCCCHHHHHHHH---HHHhccCCCCEEEEEEccchheecccccccCHHHHHHHHHhhheEEeeecCCC
Confidence 999643 236889999999999 888 9999999999999988 78899999999999999999999743
Q ss_pred ---C--CCCCCCCcccHHHHHHHHHHcCCCce-EEEeeecCC---------ChHHHHHHHHHhh
Q psy13372 221 ---R--QEPHARGEIDYAYVFELLAREGYEGY-VGLEYKPQG---------NTKEGLEEFLKTF 269 (273)
Q Consensus 221 ---~--~~~g~~G~id~~~i~~~L~~~gy~g~-~~lE~~~~~---------~~~~~~~~~~~~~ 269 (273)
+ ..||+ |.+||+.+++.|++.||+|+ +++|+.+.. ...+|++ |+|++
T Consensus 251 ~~d~h~~~~G~-G~id~~~i~~~L~~~gy~g~~v~lE~~~~~~~~~~~~~~~~~~s~~-~l~~~ 312 (316)
T 3qxb_A 251 QLDRHWSFTQP-GVVTPQRLQDFWDKYALTDQTFFAEILYPFEARDEDVLADMIASVK-ALKAA 312 (316)
T ss_dssp SSCCCBCTTSC-SSCCHHHHHHHHHHTTCSSCCEEECCCCCTTSCHHHHHHHHHHHHH-HHHTC
T ss_pred CcCccCCCCCC-ceECHHHHHHHHHHcCCCCceEEEEecCccccCcHHHHHHHHHHHH-HHHhc
Confidence 2 35899 99999999999999999996 899987542 3557788 88875
No 15
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=100.00 E-value=2e-38 Score=273.40 Aligned_cols=250 Identities=18% Similarity=0.226 Sum_probs=207.5
Q ss_pred Cccccccccc---ccccc-c-ccCHHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeEEEec--CC---cc
Q psy13372 4 PSFKLAANLT---LLFND-L-AANYLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQVLINT--EV---DE 72 (273)
Q Consensus 4 ~~~k~~~~~~---~~~~~-~-~~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~~~~~--~~---~~ 72 (273)
.+||+|++++ +.|.. . ..++++.++.++++||++||++... ...+.+++++.++++||++++++. +. ..
T Consensus 19 ~~mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~ 98 (290)
T 2zvr_A 19 SHMKLSLVISTSDAAFDALAFKGDLRKGMELAKRVGYQAVEIAVRDPSIVDWNEVKILSEELNLPICAIGTGQAYLADGL 98 (290)
T ss_dssp --CEEEEEECCCC-------CHHHHHHHHHHHHHHTCSEEEEECSCGGGSCHHHHHHHHHHHTCCEEEEECTHHHHTTCC
T ss_pred CCceeEEecccchhhccccccccCHHHHHHHHHHhCCCEEEEcCCCcchhhHHHHHHHHHHcCCeEEEEeccCccccCCC
Confidence 3489999984 33331 1 1388999999999999999999762 136789999999999999998876 21 11
Q ss_pred ccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 73 NFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+. .+++++.|+..++.+++.++.|+.+|++.|+ ++ |..+ . ...++.++++++.|++++++|++ |++++|
T Consensus 99 ~l-~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~-~~~~g~~~-~----~~~~~~~~~~~~~l~~l~~~a~~--v~l~lE 169 (290)
T 2zvr_A 99 SL-THPNDEIRKKAIERVVKHTEVAGMFGALVII-GLVRGRRE-G----RSYEETEELFIESMKRLLELTEH--AKFVIE 169 (290)
T ss_dssp CT-TCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE-SGGGCCCT-T----SCHHHHHHHHHHHHHHHHHHCSS--CCEEEC
T ss_pred CC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE-ecCCCCCC-C----cCHHHHHHHHHHHHHHHHHHhcc--CEEEEE
Confidence 22 2356778999999999999999999999998 44 4421 1 11678899999999999999998 999999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcc
Q psy13372 151 PVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEI 230 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~i 230 (273)
|++++ ++.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|||++|. ++..||+ |.+
T Consensus 170 n~~~~--~~~~~~~~~~~~~l~---~~~~~~~vgl~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~-~r~~~G~-G~i 242 (290)
T 2zvr_A 170 PLNRY--ETDFINTIDDALRIL---RKINSNRVGILADTFHMNIEEVNIPESLKRAGEKLYHFHVADS-NRWAPGC-GHF 242 (290)
T ss_dssp CCCTT--TCSSCCSHHHHHHHH---HHHCCTTEEEEEEHHHHHHHCSSHHHHHHHHGGGEEEEEECCT-TSSSTTS-SCC
T ss_pred eCCCc--CccccCCHHHHHHHH---HHcCCCCEEEEEehhHhhhcCCCHHHHHHHhhccEEEEEEcCC-CCCCCCC-ccc
Confidence 98643 567899999999999 9999999999999999999999999999999999999999996 6789999 999
Q ss_pred cHHHHHHHHHHcCCCceEEEeeecCCC-h----HHHHHHHHHhhc
Q psy13372 231 DYAYVFELLAREGYEGYVGLEYKPQGN-T----KEGLEEFLKTFD 270 (273)
Q Consensus 231 d~~~i~~~L~~~gy~g~~~lE~~~~~~-~----~~~~~~~~~~~~ 270 (273)
||..+++.|++.||+|++++|+.+..+ + .++++ ||++..
T Consensus 243 d~~~~~~~L~~~gy~g~i~lE~~~~~~~~~~~~~~s~~-~l~~~~ 286 (290)
T 2zvr_A 243 DFRSVFNTLKEIGYNRYVSVECLPLPGGMEEAAEIAFK-TLKELI 286 (290)
T ss_dssp CHHHHHHHHHHTTCCSEEEECCCSTTTSHHHHHHHHHH-HHHHHC
T ss_pred CHHHHHHHHHHcCCCceEEEEecCCCChHHHHHHHHHH-HHHHHH
Confidence 999999999999999999999987654 3 67788 888753
No 16
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=100.00 E-value=6.5e-38 Score=271.91 Aligned_cols=250 Identities=13% Similarity=0.108 Sum_probs=203.2
Q ss_pred CcccccccccccccccccCHHHHHHHHHHcCCCeEEecCC-----C----CCCCHHHHHHHHHHcCCeeEEEecCCcccc
Q psy13372 4 PSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP-----P----VGVTLEQLVAAQTRHGLKQVLINTEVDENF 74 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-----~----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~ 74 (273)
-|||||++++ .+... ++++.++.++++||++||++.. . .....+++++.++++||+..+++.+...+.
T Consensus 4 ~mmklG~~~~-~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl 80 (303)
T 3aal_A 4 HMLKIGSHVS-MSGKK--MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINI 80 (303)
T ss_dssp --CCEEEECC-CCTTT--THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCT
T ss_pred cceeeceeee-cCCCc--cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccC
Confidence 3789999995 44444 8999999999999999999531 1 124689999999999995444444432233
Q ss_pred CCCCC-chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 75 GYAAV-KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 75 ~~~~~-~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.+++ ++.|+.+++.+++.+++|+.||++.|++|+|..... + .++.++++++.|+++++.| +||++++||++
T Consensus 81 -~s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~~~~~-~----~~~~~~~~~~~l~~l~~~a--~gv~l~lEn~~ 152 (303)
T 3aal_A 81 -GNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGAHVGA-G----VEAGLRQIIRGLNEVLTRE--QNVQIALETMA 152 (303)
T ss_dssp -TCSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCEECTTS-C----HHHHHHHHHHHHHHHCCSS--CSCEEEEECCC
T ss_pred -CCCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCCCC-C----HHHHHHHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 2356 888999999999999999999999999999865322 1 6788999999999999988 89999999986
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhcCC-CceeEeeecccccccCCCh----HHHHHhc-----CCcceeEEeccCCC---
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAHGI-SNVQLQFDFFNAQRICGDL----THTFGAC-----RDLIGHVQIAQAPD--- 220 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~~~-~~~g~~~D~~h~~~~~~~~----~~~i~~~-----~~~i~~vHi~d~~~--- 220 (273)
.. +..+..|++++.+++ +.+++ |++|+|+|++|+...+.++ .++++.+ .++|.|||++|+..
T Consensus 153 ~~--~~~~~~t~~~~~~li---~~v~~~~~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~~ 227 (303)
T 3aal_A 153 GK--GSECGRTFEELAYII---DGVAYNDKLSVCFDTCHTHDAGYDIVNDFDGVLEEFDRIIGLGRLKVLHINDSKNPRG 227 (303)
T ss_dssp CC--TTEECSSHHHHHHHH---HHCTTGGGEEEEEEHHHHHHHTCCHHHHHHHHHHHHHHHTCGGGEEEEEECEESSCTT
T ss_pred CC--CCccCCCHHHHHHHH---HhcCCCCCEEEEEEccCHhhhCCChhhhHHHHHHHHHHhcCcccEEEEEeeCCCCcCC
Confidence 43 455677999999999 99996 9999999999999988864 3455544 49999999999753
Q ss_pred ----CC-CCCCCCcccHHHHHHHHHHcCCCc-eEEEeeec---C-----CChHHHHHHHHHhhcc
Q psy13372 221 ----RQ-EPHARGEIDYAYVFELLAREGYEG-YVGLEYKP---Q-----GNTKEGLEEFLKTFDL 271 (273)
Q Consensus 221 ----~~-~~g~~G~id~~~i~~~L~~~gy~g-~~~lE~~~---~-----~~~~~~~~~~~~~~~~ 271 (273)
++ .||+ |.+||..+++.|++.||+| ++++|+.. . ++..++++ |||+.+|
T Consensus 228 ~~~d~h~~~G~-G~id~~~~~~~L~~~gy~g~~i~lE~~~~~~~~~~~~~~~~~si~-~lr~~~~ 290 (303)
T 3aal_A 228 SRKDRHENIGF-GHIGFAALNYIVHHPQLEDIPKILETPYVGEDKNNKKPPYKHEIA-MLRAQSF 290 (303)
T ss_dssp CCCCCEECTTS-SSSCHHHHHHHHTCTTCTTSCEEECCCCBCSSTTCCBCCHHHHHH-HHHHTCC
T ss_pred CCCcCCCCCCC-CCCCHHHHHHHHhCcCcCCCeEEEeccCcCCCccccccchHHHHH-HHHhccc
Confidence 33 6899 9999999999999999999 99999864 2 57899999 9999775
No 17
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=100.00 E-value=3.9e-38 Score=272.46 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=203.2
Q ss_pred cccccccccccc-c------cccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCC
Q psy13372 6 FKLAANLTLLFN-D------LAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAA 78 (273)
Q Consensus 6 ~k~~~~~~~~~~-~------~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~ 78 (273)
||+|+++. .|. . ...++++.++.++++||++||++.+++ +.++++++++++||+++++... . . .
T Consensus 10 mklg~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~l~~~gl~~~~~~~~--~---~-~ 80 (301)
T 3cny_A 10 IKWGIAPI-GWRNDDIPSIGKDNNLQQLLSDIVVAGFQGTEVGGFFP--GPEKLNYELKLRNLEIAGQWFS--S---Y-I 80 (301)
T ss_dssp EEEEECGG-GTCCSSSTTTTTTCCHHHHHHHHHHHTCCEECCCTTCC--CHHHHHHHHHHTTCEECEEEEE--E---C-H
T ss_pred eeEEeccc-cccCccccccccCCCHHHHHHHHHHhCCCEEEecCCCC--CHHHHHHHHHHCCCeEEEEecc--C---C-C
Confidence 89999984 542 1 113899999999999999999996553 7899999999999999987322 1 1 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCC------CCCCCCC-CCCC-CcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSG------KTESSRT-QPIA-SEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G------~~~~~~~-~~~~-~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+++.++..++.+++.++.|+.||++.|+++++ ......+ .+.. .++.++++++.|++++++|+++||++++|
T Consensus 81 ~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 160 (301)
T 3cny_A 81 IRDGIEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYH 160 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 36678889999999999999999999999873 2211000 0111 46789999999999999999999999999
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCC----------
Q psy13372 151 PVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPD---------- 220 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~---------- 220 (273)
|+. +.++.+++++.+++ +.+++|++|+|+|++|+...+.++.++++.++++|.|||++|...
T Consensus 161 ~~~-----~~~~~~~~~~~~l~---~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~ 232 (301)
T 3cny_A 161 HHM-----GTGIQTKEETDRLM---ANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRVVHVHFKDVRRSKEEECRAKG 232 (301)
T ss_dssp CCT-----TSSSCSHHHHHHHH---HTSCTTTCEEEEEHHHHHHHHSCSHHHHHHHGGGEEEEEECEECHHHHHHHHHHT
T ss_pred cCC-----CcccCCHHHHHHHH---HhCCccceeEEechHHHHHcCCCHHHHHHHHHhheeEEEeecCCcchhhhhhhcc
Confidence 974 45789999999999 999999999999999999988999999999999999999999742
Q ss_pred -----------CCCCCCCCcccHHHHHHHHHHcCCCceEEEeeecC---C----ChHHHHHHHHHhh
Q psy13372 221 -----------RQEPHARGEIDYAYVFELLAREGYEGYVGLEYKPQ---G----NTKEGLEEFLKTF 269 (273)
Q Consensus 221 -----------~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~---~----~~~~~~~~~~~~~ 269 (273)
...||+ |.+||..+++.|++.||+|++++|+... . ...++++ ||++.
T Consensus 233 ~~~~~~~~~~~~~~~G~-G~id~~~i~~~L~~~gy~g~~~~E~~~~~~~~~~~~~~~~s~~-~l~~~ 297 (301)
T 3cny_A 233 LTFQGSFLNGMFTVPGD-GDLDFKPVYDKLIANNYKGWIVVEAEQDPSKANPLEMAQIAHR-YIKQH 297 (301)
T ss_dssp CCHHHHHHTTCEECTTT-SSCCCHHHHHHHHHTTCCEEEEECCCCCTTTSCHHHHHHHHHH-HHHHH
T ss_pred cchhhHhhcCccccCCC-CCccHHHHHHHHHhcCCCeEEEEeecCCCCcCChHHHHHHHHH-HHHHH
Confidence 137999 9999999999999999999999998742 2 3567777 88875
No 18
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=5.4e-37 Score=269.71 Aligned_cols=241 Identities=12% Similarity=0.064 Sum_probs=196.8
Q ss_pred Ccccccccccccccc-c-ccCHH------HHHHHHHHcCCCeEEecCCCC-C-------CCHHHHHHHHHHcCCe---eE
Q psy13372 4 PSFKLAANLTLLFND-L-AANYL------DKYRVAAELGFRYIESWFPPV-G-------VTLEQLVAAQTRHGLK---QV 64 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~-~-~~~~~------~~l~~~~~~G~~~vEl~~~~~-~-------~~~~~~~~~l~~~gL~---i~ 64 (273)
+.||||+|+ +.|.. . ..+++ +.++.++++||++||++.... . ...+++++.++++||+ ++
T Consensus 7 ~~mklg~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~ 85 (335)
T 2qw5_A 7 ATSDIYISF-FMFTTNLQPDNLDYRRIVVAHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIS 85 (335)
T ss_dssp CCCCEEEEG-GGTCSCCCTTCHHHHHHHHHHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred hhcceeEEE-eeecCCCChhhhhccchHHHHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeE
Confidence 458999998 45543 1 13788 999999999999999986421 1 3468999999999999 88
Q ss_pred EE-ecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCC-CCCCC------------CcchHHHHH
Q psy13372 65 LI-NTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSR-TQPIA------------SEDPYTTLK 130 (273)
Q Consensus 65 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~-~~~~~------------~~~~~~~~~ 130 (273)
++ +.+...+. .+++++.++..++.+++++++|+.||++.| ++++..+... ..... .++.+++++
T Consensus 86 ~~~~~~~~~~l-~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (335)
T 2qw5_A 86 TNVGATRTFDP-SSNYPEQRQEALEYLKSRVDITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQ 163 (335)
T ss_dssp EECCCCSSSCT-TCSSHHHHHHHHHHHHHHHHHHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHH
Confidence 74 33322222 234678899999999999999999999999 4432111110 00001 356789999
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChH---HHHHhcC
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLT---HTFGACR 207 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~---~~i~~~~ 207 (273)
+.|++++++|+++||++++||++++ ++.++.|.+++.+++ +.+++|++|+|+|++|+...+.|+. +.+++++
T Consensus 164 ~~l~~l~~~a~~~Gv~l~lE~~~~~--~~~~~~t~~~~~~ll---~~v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~ 238 (335)
T 2qw5_A 164 PILDKLGEYAEIKKVKLAIEPITHW--ETPGPNKLSQLIEFL---KGVKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLA 238 (335)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCTT--TCSSCCSHHHHHHHH---TTCCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeeCCcc--cccccCCHHHHHHHH---HhcCCCCeeEEEecccchhccCChHHHHHHHHHhC
Confidence 9999999999999999999998753 466899999999999 9999999999999999999999999 9999999
Q ss_pred --CcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeeecC
Q psy13372 208 --DLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 208 --~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~ 255 (273)
++|.|||+||+ .+..||+ |.+||..+++.|++ ||+||+++|+++.
T Consensus 239 ~~~ri~~vHlkD~-~~~~~G~-G~id~~~i~~~L~~-gy~G~~~~E~~~~ 285 (335)
T 2qw5_A 239 QQGRLHYVQVSPP-DRGALHT-SWLPWKSFLTPIVK-VYDGPIAVEIFNA 285 (335)
T ss_dssp HHTCEEEEEECCT-TSSCSSS-SCCCHHHHHHHHHH-HCCSCEEECCCCS
T ss_pred CcCCEEEEEECCC-CCCCCCC-CCcCHHHHHHHHHc-cCCccEEEEecCC
Confidence 99999999997 5788999 99999999999999 9999999998765
No 19
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=100.00 E-value=2.2e-37 Score=266.69 Aligned_cols=241 Identities=17% Similarity=0.181 Sum_probs=202.7
Q ss_pred CCcccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCC----CCCHHHHHHHHHHcCCeeEEEecCCc----cc-
Q psy13372 3 APSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPV----GVTLEQLVAAQTRHGLKQVLINTEVD----EN- 73 (273)
Q Consensus 3 ~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~----~~~~~~~~~~l~~~gL~i~~~~~~~~----~~- 73 (273)
++|+++|+.++. .. ++++.++.++++||++||++.+.. ....++++++++++||++++++.... .+
T Consensus 8 ~~~~~lg~~t~~---~~--~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~ 82 (290)
T 3tva_A 8 KPYWPIGVFTSV---DA--GLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADI 82 (290)
T ss_dssp -CCSCEEEEEES---SS--SSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSH
T ss_pred ccceeEEEEecC---CC--CHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccc
Confidence 478899998843 33 889999999999999999997532 23478999999999999999865211 01
Q ss_pred ------cCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 74 ------FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 74 ------~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
.+ +.+++.|+..++.+++.|+.|+.||++.|++++|..+.. .++.++++++.|++++++|+++||++
T Consensus 83 ~~~~~~~~-~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~------~~~~~~~~~~~l~~l~~~a~~~Gv~l 155 (290)
T 3tva_A 83 PTTARTVG-LVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPES------SSPDYSELVRVTQDLLTHAANHGQAV 155 (290)
T ss_dssp HHHHHHSS-SCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCT------TSHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred cccccccC-CCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCccc------chHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 12 246788999999999999999999999999999865432 56789999999999999999999999
Q ss_pred EEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccC-CChHHHHHhcCCcceeEEeccCCC-----C
Q psy13372 148 LIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRIC-GDLTHTFGACRDLIGHVQIAQAPD-----R 221 (273)
Q Consensus 148 ~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~-~~~~~~i~~~~~~i~~vHi~d~~~-----~ 221 (273)
++||+. .+++++.+++ +.+++|++|+|+|++|+...+ .++.+++++++++|.|||++|... +
T Consensus 156 ~lE~~~---------~~~~~~~~l~---~~~~~~~~g~~~D~~h~~~~g~~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~ 223 (290)
T 3tva_A 156 HLETGQ---------ESADHLLEFI---EDVNRPNLGINFDPANMILYGTGNPIEALRKVARYVRSIHCKDALWAPVNER 223 (290)
T ss_dssp EEECCS---------SCHHHHHHHH---HHHCCTTEEEEECHHHHHHTTCSCHHHHHHHHGGGEEEEEECEEECCCGGGB
T ss_pred EEecCC---------CCHHHHHHHH---HhcCCCCEEEEeccHHHHHhCCCCHHHHHHHHHhhheEEEeccccCCCcccc
Confidence 999952 5789999999 999999999999999998764 899999999999999999999621 2
Q ss_pred C-------CCCCCCcccHHHHHHHHHHcCCCceEEEeeecCC-------ChHHHHHHHHHhh
Q psy13372 222 Q-------EPHARGEIDYAYVFELLAREGYEGYVGLEYKPQG-------NTKEGLEEFLKTF 269 (273)
Q Consensus 222 ~-------~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~~-------~~~~~~~~~~~~~ 269 (273)
+ .||+ |.+||..+++.|++.||+|++++|++... ...+|++ ||++.
T Consensus 224 g~~~~~~~~~G~-G~id~~~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~s~~-~l~~l 283 (290)
T 3tva_A 224 GKSWGQEVALGT-GDVGMEAYLTTLWEIGYRGPLTIEREIPHDPVQQKKDLASALE-LLTGL 283 (290)
T ss_dssp TTBCCEEESTTS-SSSCHHHHHHHHHHTTCCSCEEECCCCTTSHHHHHHHHHHHHH-HHHHH
T ss_pred ccccccccCCCC-ceeCHHHHHHHHHHcCCCCcEEEEEecCCChhhHHHHHHHHHH-HHHHH
Confidence 1 6899 99999999999999999999999988543 3567888 88775
No 20
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=100.00 E-value=5.5e-37 Score=261.51 Aligned_cols=224 Identities=19% Similarity=0.176 Sum_probs=185.1
Q ss_pred CCCCcccccccccccccccccCHHHHHHHHHHcCCCeEEecCCC------CCCCHHHHHHHHHHcCCeeEEEecCCcccc
Q psy13372 1 MAAPSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPP------VGVTLEQLVAAQTRHGLKQVLINTEVDENF 74 (273)
Q Consensus 1 ~~~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~------~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~ 74 (273)
|.+.+||+|++++. +... ++++.++.++++||++||++... +....++++++++++||++++++.+.. +
T Consensus 2 ~~m~~m~lg~~~~~-~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~--~ 76 (272)
T 2q02_A 2 MNIEKTRFCINRKI-APGL--SIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYP--F 76 (272)
T ss_dssp CCCCGGGEEEEGGG-CTTS--CHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETT--T
T ss_pred Ccceehhhhhcccc-cCCC--CHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhc--c
Confidence 66778999999954 6666 99999999999999999998421 236789999999999999998876422 1
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHH-HHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 75 GYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTL-KENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+. +++ ...+.+++.++.|+.||++.|++++|..+ .+.++++ ++.|++++++|+++||++++||++
T Consensus 77 ~~-~~~----~~~~~~~~~i~~a~~lG~~~v~~~~g~~~---------~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~ 142 (272)
T 2q02_A 77 NQ-LTE----EVVKKTEGLLRDAQGVGARALVLCPLNDG---------TIVPPEVTVEAIKRLSDLFARYDIQGLVEPLG 142 (272)
T ss_dssp TS-CCH----HHHHHHHHHHHHHHHHTCSEEEECCCCSS---------BCCCHHHHHHHHHHHHHHHHTTTCEEEECCCC
T ss_pred CC-cHH----HHHHHHHHHHHHHHHhCCCEEEEccCCCc---------hhHHHHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 11 222 34578899999999999999999887542 2457888 999999999999999999999986
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccc--cCCChHHHHHhc-CCcceeEEeccCCC----------
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQR--ICGDLTHTFGAC-RDLIGHVQIAQAPD---------- 220 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~--~~~~~~~~i~~~-~~~i~~vHi~d~~~---------- 220 (273)
+ ++.++.+++++.+++ +.++ |++|+|+|++|+.. .++ .+.++.+ +++|.|||++|..+
T Consensus 143 ~---~~~~~~~~~~~~~l~---~~v~-~~~g~~~D~~h~~~~~~~~--~~~~~~l~~~~i~~vH~~D~~~~~~~~~~~~~ 213 (272)
T 2q02_A 143 F---RVSSLRSAVWAQQLI---REAG-SPFKVLLDTFHHHLYEEAE--KEFASRIDISAIGLVHLSGVEDTRPTEALADE 213 (272)
T ss_dssp S---TTCSCCCHHHHHHHH---HHHT-CCCEEEEEHHHHHHCTTHH--HHHHHHCCGGGEEEEEECBCCCCSCGGGCCGG
T ss_pred C---CcccccCHHHHHHHH---HHhC-cCeEEEEEchHhhccCCCc--hhhhhhCCHhHEEEEEeCCCcCCCCchhcccc
Confidence 3 456889999999999 9999 99999999999987 333 2556666 69999999999642
Q ss_pred -CCCCCCCC-cccHHHHHHHHHHcCCCceEEEeee
Q psy13372 221 -RQEPHARG-EIDYAYVFELLAREGYEGYVGLEYK 253 (273)
Q Consensus 221 -~~~~g~~G-~id~~~i~~~L~~~gy~g~~~lE~~ 253 (273)
+..||+ | .+||..+++.|++.||+|++++|.+
T Consensus 214 ~~~~~G~-G~~id~~~~~~~L~~~gy~g~~~lE~~ 247 (272)
T 2q02_A 214 QRIMLSE-KDVMQNYQQVQRLENMGYRGIYAFEPF 247 (272)
T ss_dssp GCBCCCT-TCSSCHHHHHHHHHHTTCCSCEEECCC
T ss_pred ccccCCC-CCcccHHHHHHHHHhcCCCCceEEEec
Confidence 246899 8 5999999999999999999999964
No 21
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=100.00 E-value=2.7e-37 Score=265.18 Aligned_cols=246 Identities=17% Similarity=0.135 Sum_probs=198.4
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCC---------CCCHHHHHHHHHHcCCee--EEEecCCccc
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPV---------GVTLEQLVAAQTRHGLKQ--VLINTEVDEN 73 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~---------~~~~~~~~~~l~~~gL~i--~~~~~~~~~~ 73 (273)
|||||++++. + . ++++.++.++++||++||++.... ....+++++.++++||++ .+++.+...+
T Consensus 1 ~m~~G~~~~~-~--~--~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~ 75 (285)
T 1qtw_A 1 MKYIGAHVSA-A--G--GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLIN 75 (285)
T ss_dssp CCEEEEECCC-T--T--CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCC
T ss_pred CCceeEEecc-c--c--CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCceeEEecCCcccc
Confidence 7899999854 3 2 789999999999999999963211 124688999999999995 2333332223
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 74 FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
. .+++++.|+..++.+++.++.|+.||++.|++++|......+ .++.++++++.|++++ ++++||++++||++
T Consensus 76 l-~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~----~~~~~~~~~~~l~~l~--a~~~gv~l~lEn~~ 148 (285)
T 1qtw_A 76 L-GHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQIS----EEDCLARIAESINIAL--DKTQGVTAVIENTA 148 (285)
T ss_dssp T-TCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSC----HHHHHHHHHHHHHHHH--HHCSSCEEEEECCC
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCC----HHHHHHHHHHHHHHHH--hccCCCEEEEecCC
Confidence 3 235788899999999999999999999999999987543211 5678999999999996 56799999999986
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhc-CCCceeEeeecccccccCCChHH------HH----HhcC-CcceeEEeccCCC-
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAH-GISNVQLQFDFFNAQRICGDLTH------TF----GACR-DLIGHVQIAQAPD- 220 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~-~~~~~g~~~D~~h~~~~~~~~~~------~i----~~~~-~~i~~vHi~d~~~- 220 (273)
+. ...++.|++++.+++ +.+ ++|++|+|+|++|+...+.++.+ ++ +.++ ++|.|+|++|+..
T Consensus 149 ~~--~~~~~~~~~~~~~l~---~~v~~~~~~g~~~D~~H~~~~g~~~~~~~~~~~~~~~~~~~~g~~~i~~vH~~D~~~~ 223 (285)
T 1qtw_A 149 GQ--GSNLGFKFEHLAAII---DGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARTVGFKYLRGMHLNDAKST 223 (285)
T ss_dssp CC--TTBCCSSHHHHHHHH---HHCSCGGGEEEEEEHHHHHHHTCCCSSHHHHHHHHHHHHHHTCGGGEEEEEECEESSC
T ss_pred CC--CCcccCCHHHHHHHH---HhhcCccceEEEEEhHhHHHcCCCcCChHHHHHHHHHHHHhcCccceeEEEEecCCCc
Confidence 43 456788999999999 999 89999999999999988877542 34 3345 8999999999642
Q ss_pred ------C-CCCCCCCcccHHHHHHHHHHcCCCce-EEEeeecCCChHHHHHHHHHhh
Q psy13372 221 ------R-QEPHARGEIDYAYVFELLAREGYEGY-VGLEYKPQGNTKEGLEEFLKTF 269 (273)
Q Consensus 221 ------~-~~~g~~G~id~~~i~~~L~~~gy~g~-~~lE~~~~~~~~~~~~~~~~~~ 269 (273)
+ ..||+ |.+||..+++.|++.||+|+ +++|+...+...++++ |||+.
T Consensus 224 ~~~~~~~h~~~G~-G~id~~~~~~~L~~~gy~g~~~~lE~~~~~~~~~s~~-~lr~~ 278 (285)
T 1qtw_A 224 FGSRVDRHHSLGE-GNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIA-WLKAQ 278 (285)
T ss_dssp TTCCCCCEECTTT-SSSCSHHHHHHHTCGGGTTSEEEECCSCGGGHHHHHH-HHHHH
T ss_pred ccCCcccccCCCC-CCCCHHHHHHHHhccCcCCCCEEEecCCCcchHHHHH-HHHHH
Confidence 2 26899 99999999999999999995 9999875567889999 99975
No 22
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=100.00 E-value=2.4e-36 Score=261.22 Aligned_cols=234 Identities=19% Similarity=0.172 Sum_probs=196.2
Q ss_pred ccccccccccccc-cccCHHHHHHHHHHcCCCeEEecCC-C-----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCC
Q psy13372 6 FKLAANLTLLFND-LAANYLDKYRVAAELGFRYIESWFP-P-----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAA 78 (273)
Q Consensus 6 ~k~~~~~~~~~~~-~~~~~~~~l~~~~~~G~~~vEl~~~-~-----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~ 78 (273)
+|+|++++ .|.. . ++++.++.++++||++||++.+ . .....+++++.++++||++++++.+. ++. .+
T Consensus 23 ~klgi~~~-~~~~~~--~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~--~~~-~~ 96 (296)
T 2g0w_A 23 CPITISSY-TLGTEV--SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYIT--QWG-TA 96 (296)
T ss_dssp CCEEECGG-GGTTTS--CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBC--CCS-ST
T ss_pred CCceeech-hcCCCC--CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhh--ccc-cC
Confidence 69999984 5544 5 9999999999999999999863 1 23678999999999999999988642 221 23
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCC
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVP 158 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~ 158 (273)
++..++ .++.++++++.|+.||++.|++.++ .. . .++++++.|++++++| +||++++||+++
T Consensus 97 ~~~~~~-~~~~~~~~i~~A~~lGa~~v~~g~~---~~------~--~~~~~~~~l~~l~~~a--~Gv~l~lE~~~~---- 158 (296)
T 2g0w_A 97 EDRTAE-QQKKEQTTFHMARLFGVKHINCGLL---EK------I--PEEQIIVALGELCDRA--EELIIGLEFMPY---- 158 (296)
T ss_dssp TTCCHH-HHHHHHHHHHHHHHHTCCEEEECCC---SC------C--CHHHHHHHHHHHHHHH--TTSEEEEECCTT----
T ss_pred ChHHHH-HHHHHHHHHHHHHHcCCCEEEEcCC---CC------C--CHHHHHHHHHHHHHHh--cCCEEEEEecCC----
Confidence 455555 5889999999999999999988543 11 1 2889999999999999 999999999853
Q ss_pred CcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCC-------------CCCCCC
Q psy13372 159 GYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAP-------------DRQEPH 225 (273)
Q Consensus 159 ~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~-------------~~~~~g 225 (273)
.++.+.+++.+++ +++++|++|+|+|++|+...+.++.++++.++++|.|||++|.+ ++..||
T Consensus 159 -~~~~~~~~~~~l~---~~v~~~~vgl~~D~~H~~~~g~d~~~~~~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~r~~pG 234 (296)
T 2g0w_A 159 -SGVADLQAAWRVA---EACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDRLAPG 234 (296)
T ss_dssp -SSSCSHHHHHHHH---HHHTCTTEEEEEEHHHHHHTTCCGGGGTTCCGGGEEEEEECBCCSSCCSSHHHHHHHBCBCTT
T ss_pred -CCCCCHHHHHHHH---HHhCCCCeEEEEehhHhhccCCCHHHHHhcChhhEEEEEecCCCCCCchhhhhHHHhcCCCCC
Confidence 3579999999999 99999999999999999999999999999999999999999975 457899
Q ss_pred CCCcccHHHHHHHHHHcCCCce-EEEeeecCC----C----hHHHHHHHHHhh
Q psy13372 226 ARGEIDYAYVFELLAREGYEGY-VGLEYKPQG----N----TKEGLEEFLKTF 269 (273)
Q Consensus 226 ~~G~id~~~i~~~L~~~gy~g~-~~lE~~~~~----~----~~~~~~~~~~~~ 269 (273)
+ |.+||..+++.|++.||+|+ +++|+.+.. + ..++++ ++++.
T Consensus 235 ~-G~id~~~i~~~L~~~gy~G~~~~lE~~~~~~~~~~~~~~~~~~~~-~l~~~ 285 (296)
T 2g0w_A 235 E-GYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYN-ATKKV 285 (296)
T ss_dssp S-SSSCHHHHHHHHHHHTCCCSCEEECCCBHHHHHHCHHHHHHHHHH-HHHHH
T ss_pred C-CCccHHHHHHHHHHcCCCCCeeEEEecChhhccCCHHHHHHHHHH-HHHHH
Confidence 9 99999999999999999999 999987532 2 456666 66654
No 23
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=100.00 E-value=2.4e-36 Score=265.67 Aligned_cols=252 Identities=19% Similarity=0.172 Sum_probs=204.1
Q ss_pred ccccccccccccccccCHHHHHHHHHHcCCCeEEecCC---CC-------CCCHHHHHHHHHHcCCeeEEEecCC-----
Q psy13372 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP---PV-------GVTLEQLVAAQTRHGLKQVLINTEV----- 70 (273)
Q Consensus 6 ~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~---~~-------~~~~~~~~~~l~~~gL~i~~~~~~~----- 70 (273)
||+|+++ +.+... ++++.++.++++||++||++.. .+ ....++++++++++||+++++++..
T Consensus 3 mklg~~~-~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~ 79 (340)
T 2zds_A 3 RNFTLFT-GQWADL--PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAV 79 (340)
T ss_dssp CCEEEES-GGGTTS--CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHH
T ss_pred cceEEee-cccCCC--CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeecccccccc
Confidence 7999998 566565 9999999999999999999852 11 1236899999999999999876431
Q ss_pred --c-ccc---C-----CCC--C-chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCC--CCC----CCcchHHHHH
Q psy13372 71 --D-ENF---G-----YAA--V-KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRT--QPI----ASEDPYTTLK 130 (273)
Q Consensus 71 --~-~~~---~-----~~~--~-~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~--~~~----~~~~~~~~~~ 130 (273)
. .+. + +.. + ++.|+..++.++++|+.|+.||++.|++++|....... .+. ..++.+++++
T Consensus 80 ~~p~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (340)
T 2zds_A 80 CDAIIDERHEAILPARIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFA 159 (340)
T ss_dssp HCSCCSHHHHHHSCHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHH
Confidence 0 000 0 001 3 35788899999999999999999999999886531100 000 1356789999
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC-CCceeEeeecccccccCCChHHHHHhcCCc
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG-ISNVQLQFDFFNAQRICGDLTHTFGACRDL 209 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~-~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~ 209 (273)
+.|++++++|+++||++++||++ +.++.+++++.+++ +.++ +|++|+|+|++|+...+.++.++++.++++
T Consensus 160 ~~l~~l~~~a~~~Gv~l~lEn~~-----~~~~~~~~~~~~ll---~~v~~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~~ 231 (340)
T 2zds_A 160 DRWNPILDVFDAEGVRFAHEVHP-----SEIAYDYWTTHRAL---EAVGHRPAFGLNFDPSHFVWQDLDPVGFLWDFRDR 231 (340)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCT-----TSSCCSHHHHHHHH---HHTTTCTTEEEEECCHHHHHTTCCHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHcCCEEEEEcCC-----CcccCCHHHHHHHH---HhcCCCCCeeEEEchhhHHHhCCCHHHHHHHHHhh
Confidence 99999999999999999999975 34678999999999 9998 899999999999999999999999999999
Q ss_pred ceeEEeccCCC-------------------CC----CCCCCCcccHHHHHHHHHHcCCCceEEEeeecC-----CChHHH
Q psy13372 210 IGHVQIAQAPD-------------------RQ----EPHARGEIDYAYVFELLAREGYEGYVGLEYKPQ-----GNTKEG 261 (273)
Q Consensus 210 i~~vHi~d~~~-------------------~~----~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~-----~~~~~~ 261 (273)
|.|||++|+.. |. .||+ |.+||..+++.|++.||+|++++|+.+. +...++
T Consensus 232 i~~vHl~D~~~~~~~~~g~~~~~~~~~~~~r~~~~~~~G~-G~id~~~i~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~s 310 (340)
T 2zds_A 232 IYHVDCKEARKRLDGRNGRLGSHLPWGDPRRGWDFVSAGH-GDVPWEDVFRMLRSIDYQGPVSVEWEDAGMDRLQGAPEA 310 (340)
T ss_dssp EEEEEECEEEECCCSSSCTTCTTCCTTCTTSSEEEECTTS-SCCCHHHHHHHHHHTTCCSCEEECCCCTTSCHHHHHHHH
T ss_pred EEEEEeccCccccccccccccccCCcccccccceecCCCC-CccCHHHHHHHHHhcCCCccEEEEeeCCCcCHHHHHHHH
Confidence 99999999631 21 6899 9999999999999999999999998752 246678
Q ss_pred HHHHHHhhc
Q psy13372 262 LEEFLKTFD 270 (273)
Q Consensus 262 ~~~~~~~~~ 270 (273)
++ |||+..
T Consensus 311 ~~-~l~~~~ 318 (340)
T 2zds_A 311 LT-RLKAFD 318 (340)
T ss_dssp HH-HHHTTC
T ss_pred HH-HHHHHH
Confidence 88 888753
No 24
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=100.00 E-value=3.5e-36 Score=255.03 Aligned_cols=221 Identities=14% Similarity=0.136 Sum_probs=187.1
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCC---CC--CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCC
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP---PV--GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAV 79 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~---~~--~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~ 79 (273)
.||+|+++ +.|.+. ++++.++.++++||++||++.. ++ ....+++++.++++||++++++.+..
T Consensus 17 ~~klg~~~-~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-------- 85 (257)
T 3lmz_A 17 PFHLGMAG-YTFVNF--DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM-------- 85 (257)
T ss_dssp SSEEEECG-GGGTTS--CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE--------
T ss_pred ceEEEEEE-EeecCC--CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc--------
Confidence 38999999 677776 9999999999999999999964 22 12358999999999999998875421
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCC
Q psy13372 80 KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPG 159 (273)
Q Consensus 80 ~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~ 159 (273)
..++.+++.++.|+.||++.|++++| .+.|++++++|+++||++++||+++ .+
T Consensus 86 -----~~~~~~~~~i~~A~~lGa~~v~~~p~-------------------~~~l~~l~~~a~~~gv~l~lEn~~~---~~ 138 (257)
T 3lmz_A 86 -----KSEEEIDRAFDYAKRVGVKLIVGVPN-------------------YELLPYVDKKVKEYDFHYAIHLHGP---DI 138 (257)
T ss_dssp -----CSHHHHHHHHHHHHHHTCSEEEEEEC-------------------GGGHHHHHHHHHHHTCEEEEECCCT---TC
T ss_pred -----CCHHHHHHHHHHHHHhCCCEEEecCC-------------------HHHHHHHHHHHHHcCCEEEEecCCC---cc
Confidence 23678999999999999999999754 1357789999999999999999863 24
Q ss_pred cccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCC-----C-CCCCCCCcccHH
Q psy13372 160 YYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPD-----R-QEPHARGEIDYA 233 (273)
Q Consensus 160 ~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~-----~-~~~g~~G~id~~ 233 (273)
.++.+.+++.+++ +. .+|++|+++|++|+...+.|+.++++.++++|.|+|++|... + ..||+ |.+||.
T Consensus 139 ~~~~~~~~~~~ll---~~-~~p~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~G~-G~id~~ 213 (257)
T 3lmz_A 139 KTYPDATDVWVHT---KD-LDPRIGMCLDVGHDLRNGCDPVADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGR-GKIDFP 213 (257)
T ss_dssp SSSCSHHHHHHHH---TT-SCTTEEEEEEHHHHHHTTCCHHHHHHHHGGGEEEEEECEESCSSTTCCEECTTS-SSCCHH
T ss_pred cccCCHHHHHHHH---Hh-CCCCccEEEchhhHHHcCCCHHHHHHHhhcceeEEeecccccccCCCCccccCC-CccCHH
Confidence 5788999999999 86 468999999999999999999999999999999999999742 1 27899 999999
Q ss_pred HHHHHHHHcCCCceEEEeee-----cCCChHHHHHHHHHhh
Q psy13372 234 YVFELLAREGYEGYVGLEYK-----PQGNTKEGLEEFLKTF 269 (273)
Q Consensus 234 ~i~~~L~~~gy~g~~~lE~~-----~~~~~~~~~~~~~~~~ 269 (273)
.+++.|++.||+|++++|+. +.+...++++ |||+.
T Consensus 214 ~~~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~s~~-~l~~~ 253 (257)
T 3lmz_A 214 ALIRMMREVNYTGMCSLEYEKDMKDPFLGIAESIG-YFKAV 253 (257)
T ss_dssp HHHHHHHHTTCCSEEEECCCSSTTSCHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHcCCCceEEEEecCCcCCHHHHHHHHHH-HHHHH
Confidence 99999999999999999987 2234678888 88875
No 25
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=100.00 E-value=8.4e-36 Score=254.32 Aligned_cols=237 Identities=15% Similarity=0.089 Sum_probs=193.7
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCC----C-----CCCHHHHHHHHHHcCC-eeEEEecCCcccc
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPP----V-----GVTLEQLVAAQTRHGL-KQVLINTEVDENF 74 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~----~-----~~~~~~~~~~l~~~gL-~i~~~~~~~~~~~ 74 (273)
|||||++++ ++... ++++.++.++++||++||++... . ....+++++.++++|| .++++. +...+.
T Consensus 1 Mmklg~~~~-~~~~~--~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~-~~~~~l 76 (270)
T 3aam_A 1 MPRYGFHLS-IAGKK--GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHA-SYLVNL 76 (270)
T ss_dssp -CEEEEBCC-CCSTT--HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEEC-CTTCCT
T ss_pred Cceeeeccc-cCCCc--cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEec-CcccCC
Confidence 799999984 44444 89999999999999999996421 1 1246899999999999 655444 322233
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHh-hCCcEEEEccCC
Q psy13372 75 GYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELE-RHSLTALIEPVN 153 (273)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~i~lE~~~ 153 (273)
.+ +++.|+.+++.+++.+++|+.||++.+++|+|.. . . +++++.|+++++.|+ ++||++++||++
T Consensus 77 -~s-~~~~r~~~~~~~~~~i~~a~~lGa~~vv~h~g~~--~------~----~~~~~~l~~l~~~a~~~~gv~l~lEn~~ 142 (270)
T 3aam_A 77 -GA-EGELWEKSVASLADDLEKAALLGVEYVVVHPGSG--R------P----ERVKEGALKALRLAGVRSRPVLLVENTA 142 (270)
T ss_dssp -TC-SSTHHHHHHHHHHHHHHHHHHHTCCEEEECCCBS--C------H----HHHHHHHHHHHHHHTCCSSSEEEEECCC
T ss_pred -CC-CHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCCC--C------H----HHHHHHHHHHHHhhcccCCCEEEEecCC
Confidence 23 7888999999999999999999999999999864 2 2 789999999999999 999999999986
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCC----hHHHHHhc----C-CcceeEEeccCCC----
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGD----LTHTFGAC----R-DLIGHVQIAQAPD---- 220 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~----~~~~i~~~----~-~~i~~vHi~d~~~---- 220 (273)
+. ...+..|++++.+++ +.+ ++|+|+|++|+...+.+ +.++++.+ + ++|.|+|++|+.+
T Consensus 143 ~~--~~~~~~~~~~~~~l~---~~v---~vg~~lD~~H~~~~g~d~~~~~~~~l~~~~~~~g~~~i~~vHl~D~~~~~~~ 214 (270)
T 3aam_A 143 GG--GEKVGARFEELAWLV---ADT---PLQVCLDTCHAYAAGYDVAEDPLGVLDALDRAVGLERVPVVHLNDSVGGLGS 214 (270)
T ss_dssp CC--TTBSCCSHHHHHHHH---TTS---SCEEEEEHHHHHHHTCCTTTCHHHHHHHHHHHTCGGGCCEEECCEESSCTTC
T ss_pred CC--CCccCCCHHHHHHHH---HhC---CEEEEEehhhHHhccCCchhhHHHHHHHHHHhcCccceeEEEEecCCCcccc
Confidence 43 345667999999999 988 89999999999988876 56777665 4 8999999999643
Q ss_pred ---CC-CCCCCCcccHHHHHHHHHHcCCCc-eEEEeeecCCCh-HHHHHHHHHhhc
Q psy13372 221 ---RQ-EPHARGEIDYAYVFELLAREGYEG-YVGLEYKPQGNT-KEGLEEFLKTFD 270 (273)
Q Consensus 221 ---~~-~~g~~G~id~~~i~~~L~~~gy~g-~~~lE~~~~~~~-~~~~~~~~~~~~ 270 (273)
++ .||+ |.+| ..+++.|++.||+| ++++|+...... .++++ |||++.
T Consensus 215 ~~d~h~~~G~-G~id-~~~~~~L~~~~y~g~~~~lE~~~~~~~~~~~i~-~lr~~~ 267 (270)
T 3aam_A 215 RVDHHAHLLQ-GKIG-EGLKRVFLDPRLKDRVFILETPRGPEEDAWNLR-VFRAWL 267 (270)
T ss_dssp CCCCEECTTS-SSST-THHHHHHTCGGGTTSEEEECSCCSHHHHHHHHH-HHHHHH
T ss_pred CcccccCCCC-CCcC-HHHHHHHhccCcCCCeEEEEcCCCCcchHHHHH-HHHHHh
Confidence 33 5799 9999 99999999999999 999998754456 88899 998753
No 26
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=100.00 E-value=1.7e-36 Score=260.43 Aligned_cols=245 Identities=12% Similarity=0.103 Sum_probs=196.3
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCC----C-----CCCHHHHHHHHHHcCCee--EEEecCCccc
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPP----V-----GVTLEQLVAAQTRHGLKQ--VLINTEVDEN 73 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~----~-----~~~~~~~~~~l~~~gL~i--~~~~~~~~~~ 73 (273)
|||||+++++ +. ++++.++.++++||++||++... . ....+++++.++++||++ .+.+.+...+
T Consensus 1 m~~~G~~~~~-~~----~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~ 75 (287)
T 2x7v_A 1 MIKIGAHMPI-SK----GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDWENAFCHSGYLIN 75 (287)
T ss_dssp CCCEEEECCC-TT----CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCGGGEEEECCTTCC
T ss_pred CCceeeeecc-cc----CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCcceeEEecccccc
Confidence 7899998843 22 67999999999999999997521 1 124689999999999995 3333332223
Q ss_pred cCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 74 FGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
. .+++++.|+..++.+++.++.|+.||++.|++++|..... + .++.++++++.|+++++. ++||++++||++
T Consensus 76 ~-~~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~-~----~~~~~~~~~~~l~~l~~~--~~gv~l~lEn~~ 147 (287)
T 2x7v_A 76 L-ASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGT-G----EEEGIDRIVRGLNEVLNN--TEGVVILLENVS 147 (287)
T ss_dssp T-TCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTS-C----HHHHHHHHHHHHHHHHTT--CCSCEEEEECCC
T ss_pred c-CCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCC-C----HHHHHHHHHHHHHHHHcc--cCCCEEEEeCCC
Confidence 3 2357788999999999999999999999999998865321 1 567899999999999853 389999999986
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhcCC-CceeEeeecccccccCCChH------HHHHh----cC-CcceeEEeccCCC-
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAHGI-SNVQLQFDFFNAQRICGDLT------HTFGA----CR-DLIGHVQIAQAPD- 220 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~~~-~~~g~~~D~~h~~~~~~~~~------~~i~~----~~-~~i~~vHi~d~~~- 220 (273)
.. ...++.+++++.+++ +.+++ |++|+|+|++|+...+.++. ++++. ++ ++|.|+|++|+..
T Consensus 148 ~~--~~~~~~~~~~~~~l~---~~~~~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~l~~~~~~~g~~~i~~vH~~D~~~~ 222 (287)
T 2x7v_A 148 QK--GGNIGYKLEQLKKIR---DLVDQRDRVAITYDTCHGFDSGYDITKKEGVEALLNEIESLFGLERLKMIHLNDSKYP 222 (287)
T ss_dssp CC--TTEECSSHHHHHHHH---HHCSCGGGEEEEEEHHHHHHTTCCTTSHHHHHHHHHHHHHHTCGGGEEEEEECEESSC
T ss_pred CC--CCccCCCHHHHHHHH---HhcCCCCCeEEEEEhhhHHHcCCCCCchHHHHHHHHHHHHhcCccceeEEEEecCCCc
Confidence 43 344678999999999 99998 99999999999998888765 45555 34 9999999999642
Q ss_pred ------CC-CCCCCCcccHHHHHHHHHHcCCCc-eEEEeeec-CCChHHHHHHHHHhh
Q psy13372 221 ------RQ-EPHARGEIDYAYVFELLAREGYEG-YVGLEYKP-QGNTKEGLEEFLKTF 269 (273)
Q Consensus 221 ------~~-~~g~~G~id~~~i~~~L~~~gy~g-~~~lE~~~-~~~~~~~~~~~~~~~ 269 (273)
++ .||+ |.+||..+++.|++.||+| ++++|+.. .+...++++ |||+.
T Consensus 223 ~~~~~~~~~~~G~-G~id~~~~~~~L~~~gy~g~~~~lE~~~~~~~~~~s~~-~l~~~ 278 (287)
T 2x7v_A 223 LGAAKDRHERIGS-GFIGEEGFAVFFSFKEIQEVPWILETPGGNEEHAEDIK-KVFEI 278 (287)
T ss_dssp TTCCCCCEECTTS-SSSHHHHHHHHHTCHHHHTSCEEECCSSCHHHHHHHHH-HHHHH
T ss_pred cCCcccccCCCCC-CCcCHHHHHHHHhccCCCCCcEEEecCCCCcchHHHHH-HHHHH
Confidence 33 6899 9999999999999999999 79999863 245678888 88874
No 27
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=100.00 E-value=2.9e-35 Score=264.04 Aligned_cols=250 Identities=17% Similarity=0.181 Sum_probs=202.7
Q ss_pred CCCccccccccccccc----c------cccCHHHHHHHHHHcCCCeEEecC----CCC------CCCHHHHHHHHHHcCC
Q psy13372 2 AAPSFKLAANLTLLFN----D------LAANYLDKYRVAAELGFRYIESWF----PPV------GVTLEQLVAAQTRHGL 61 (273)
Q Consensus 2 ~~~~~k~~~~~~~~~~----~------~~~~~~~~l~~~~~~G~~~vEl~~----~~~------~~~~~~~~~~l~~~gL 61 (273)
|.||+|||+++|++.. . ...++++.++.++++||++||++. ++. ....++++++++++||
T Consensus 4 ~~~~~k~s~~~wt~~~~~~~~~g~~t~~~~~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL 83 (394)
T 1xla_A 4 PTPADHFTFGLWTVGWTGADPFGVATRKNLDPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGL 83 (394)
T ss_dssp CCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcceeeEEeceecCCCCCCCccccCCccCHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCC
Confidence 5689999999965531 0 113699999999999999999985 321 1246899999999999
Q ss_pred eeEEEecCC-------ccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHH
Q psy13372 62 KQVLINTEV-------DENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLI 134 (273)
Q Consensus 62 ~i~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~ 134 (273)
++++++... .++. .+++++.|+..++.++++|++|+.||++.|++++|..+.......+.++.++++++.|+
T Consensus 84 ~i~~~~~~~f~~p~~~~g~l-~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~G~~g~~~~~~~~~~~~~~~~~e~L~ 162 (394)
T 1xla_A 84 KVPMVTTNLFSHPVFKDGGF-TSNDRSIRRFALAKVLHNIDLAAEMGAETFVMWGGREGSEYDGSKDLAAALDRMREGVD 162 (394)
T ss_dssp BCCEEECCCSSSGGGTTCST-TCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTCEESSGGGCCHHHHHHHHHHHHH
T ss_pred eEEEEecCccCCccccCCcc-CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCccccccccCHHHHHHHHHHHHH
Confidence 999887521 1122 23567889999999999999999999999999988542110000115678999999999
Q ss_pred HHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCc-eeEeeecccccccCCChHHHHHhc--CCc
Q psy13372 135 YACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGAC--RDL 209 (273)
Q Consensus 135 ~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~--~~~ 209 (273)
+++++|+++| |++++||+++....+.++.|.+++.+++ +.+++|+ +|+|+|++|+...+.++.+.++++ .++
T Consensus 163 ~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~~~~~~li---~~v~~pn~vgl~lD~~H~~~~g~d~~~~i~~~~~~~r 239 (394)
T 1xla_A 163 TAAGYIKDKGYNLRIALEPKPNEPRGDIFLPTVGHGLAFI---EQLEHGDIVGLNPETGHEQMAGLNFTHGIAQALWAEK 239 (394)
T ss_dssp HHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHH---TTCTTGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCeEEEEecCCCCCCccccCCCHHHHHHHH---HHhCCCCceEEEEecCcccccCCCHHHHHHHHhccCc
Confidence 9999999999 9999999863211246789999999999 9999997 999999999999999999889887 489
Q ss_pred ceeEEeccCCCC-----CCCCCCCcc-cHHHHHHHHHHc----C--CCceEEEeeecCC
Q psy13372 210 IGHVQIAQAPDR-----QEPHARGEI-DYAYVFELLARE----G--YEGYVGLEYKPQG 256 (273)
Q Consensus 210 i~~vHi~d~~~~-----~~~g~~G~i-d~~~i~~~L~~~----g--y~g~~~lE~~~~~ 256 (273)
|.|||++|..+. ..+|+ |.+ ||..+++.|++. | |+||+++|+++..
T Consensus 240 I~~vHl~D~~g~~~d~~~~~G~-G~i~~~~~~~~~L~~~~~~~G~~Y~G~v~lE~~~~~ 297 (394)
T 1xla_A 240 LFHIDLNGQRGIKYDQDLVFGH-GDLTSAFFTVDLLENGFPNGGPKYTGPRHFDYKPSR 297 (394)
T ss_dssp BCCCEECBCCSSSSCCCBCTTS-SCHHHHHHHHHHHHHCCTTCCCCCCSCEEECCCCCT
T ss_pred eeEEEecCCCCCCCCCCCCCCC-CcHHHHHHHHHHHHHhccCCCCccccceEEEEeccc
Confidence 999999997442 24899 999 799999999999 9 9999999998644
No 28
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=100.00 E-value=6.8e-35 Score=256.18 Aligned_cols=257 Identities=16% Similarity=0.133 Sum_probs=203.8
Q ss_pred cccccccccccccc----------ccCHHHHHHHHHHc-CCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCc--
Q psy13372 6 FKLAANLTLLFNDL----------AANYLDKYRVAAEL-GFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVD-- 71 (273)
Q Consensus 6 ~k~~~~~~~~~~~~----------~~~~~~~l~~~~~~-G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~-- 71 (273)
.|||+++|.+.+.. ..++++.++.++++ ||++||+..+++ ..+.+++++.++++||++.+++....
T Consensus 8 ~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~~Gl~i~~~~~~~~~~ 87 (333)
T 3ktc_A 8 PEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKDAGLKAIGITPEIYLQ 87 (333)
T ss_dssp CCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHHHTCEEEEEEECTTSG
T ss_pred CcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHHcCCeEEEEecCcCcc
Confidence 38999884443321 24689999999999 999999987753 36899999999999999998876311
Q ss_pred -ccc-C-CCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 72 -ENF-G-YAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 72 -~~~-~-~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
+.. + .+++++.|+.+++.++++|++|+.||++.|++++|..+...+.+.+.+..++++++.|++++++|++.||.|.
T Consensus 88 ~~~~g~l~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~g~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~~i~lE 167 (333)
T 3ktc_A 88 KWSRGAFTNPDPAARAAAFELMHESAGIVRELGANYVKVWPGQDGWDYPFQVSHKNLWKLAVDGMRDLAGANPDVKFAIE 167 (333)
T ss_dssp GGTTCSTTCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSSCHHHHHHHHHHHHHHHHHTCTTSEEEEE
T ss_pred cccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCcCCCCcCCHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 111 1 2367889999999999999999999999999998843221100112567899999999999999986555555
Q ss_pred EccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHh--cCCcceeEEeccCCCC----C
Q psy13372 149 IEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGA--CRDLIGHVQIAQAPDR----Q 222 (273)
Q Consensus 149 lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~--~~~~i~~vHi~d~~~~----~ 222 (273)
+||+++. ...++.|.+++.+++ +.+++|++|+|+|++|+...+.++.+.++. .+++|.|||++|.+++ .
T Consensus 168 ~~p~~~~--~~~~~~~~~~~~~ll---~~v~~~~vgl~lD~~H~~~~g~~~~~~~~~~~~~~~i~~vH~~D~~~~~d~~~ 242 (333)
T 3ktc_A 168 YKPREPR--VKMTWDSAARTLLGI---EDIGLDNVGVLLDFGHALYGGESPADSAQLIIDRGRLFGMDVNDNLRGWDDDL 242 (333)
T ss_dssp CCSCSSS--SEESSCSHHHHHHHH---HHHTCTTEEEEEEHHHHHHTTCCHHHHHHHHHHTTCEEEEEBCBCCSSSCCCB
T ss_pred EecCCCC--ccccCCCHHHHHHHH---HHcCCcceEEEEecCcHhhhcCCHHHHHHHHHhCCCEEEEEeCCCCCCCCCCc
Confidence 5565443 345789999999999 999999999999999999999999888884 4899999999997543 2
Q ss_pred CCCCCCc-ccHHHHHHHHHHcCCCceEEEeeecCC-C----hHHHHHHHHHhh
Q psy13372 223 EPHARGE-IDYAYVFELLAREGYEGYVGLEYKPQG-N----TKEGLEEFLKTF 269 (273)
Q Consensus 223 ~~g~~G~-id~~~i~~~L~~~gy~g~~~lE~~~~~-~----~~~~~~~~~~~~ 269 (273)
.||. |. +||..+++.|++.||+|++++|+++.. + ...+++ ++++.
T Consensus 243 ~~G~-G~~~d~~~i~~~L~~~gy~G~i~lE~~~~~~d~~~~~~~s~~-~l~~~ 293 (333)
T 3ktc_A 243 VVGT-VHMTEIFEFFYVLKINNWQGVWQLDQFPFRENHVEAAQLSIR-FLKHI 293 (333)
T ss_dssp CTTS-SCHHHHHHHHHHHHHTTCCCCEEECCCCTTSCHHHHHHHHHH-HHHHH
T ss_pred CCCC-CCHHHHHHHHHHHHHcCCCceEEEeecCCCCChHHHHHHHHH-HHHHH
Confidence 6899 99 899999999999999999999987644 4 445666 66653
No 29
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=100.00 E-value=1.9e-35 Score=264.65 Aligned_cols=249 Identities=15% Similarity=0.143 Sum_probs=201.1
Q ss_pred CCCccccccccccccc----c------cccCHHHHHHHHHHcCCCeEEecC----CCC------CCCHHHHHHHHHHcCC
Q psy13372 2 AAPSFKLAANLTLLFN----D------LAANYLDKYRVAAELGFRYIESWF----PPV------GVTLEQLVAAQTRHGL 61 (273)
Q Consensus 2 ~~~~~k~~~~~~~~~~----~------~~~~~~~~l~~~~~~G~~~vEl~~----~~~------~~~~~~~~~~l~~~gL 61 (273)
|.+|+|||+++|++.. . ...++++.++.++++||++||++. ++. ....+++++.++++||
T Consensus 4 ~~~~~k~~~~~w~~~~~~~~~fg~~t~~~~~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL 83 (386)
T 1muw_A 4 PTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGM 83 (386)
T ss_dssp CCGGGCEEEEHHHHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCccceEeeecccccCCCCCcccCCCCCCCCHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCC
Confidence 5689999999965531 1 113699999999999999999985 332 1346899999999999
Q ss_pred eeEEEecCCc-------cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHH
Q psy13372 62 KQVLINTEVD-------ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLI 134 (273)
Q Consensus 62 ~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~ 134 (273)
++++++.... +++ .+++++.|+..++.++++|++|+.||++.|++++|..+.......+.++.++++++.|+
T Consensus 84 ~i~~~~~~~~~~p~~~~g~l-~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~~~~~~~~~~~~~~~~~~~~e~L~ 162 (386)
T 1muw_A 84 TVPMATTNLFTHPVFKDGGF-TANDRDVRRYALRKTIRNIDLAVELGAKTYVAWGGREGAESGAAKDVRVALDRMKEAFD 162 (386)
T ss_dssp BCCEEECCCSSSGGGTTCST-TCSSHHHHHHHHHHHHHHHHHHHHHTCSEEEECCTTCEESSTTSCCHHHHHHHHHHHHH
T ss_pred eEEEEecccccccccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCcccccccCCHHHHHHHHHHHHH
Confidence 9998875321 122 23567789999999999999999999999999988642210001115678999999999
Q ss_pred HHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCc-eeEeeecccccccCCChHHHHHhcC--Cc
Q psy13372 135 YACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGACR--DL 209 (273)
Q Consensus 135 ~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~~--~~ 209 (273)
+++++|+++| |++++||+++......++.|.+++.+++ +.+++|+ +|+|+|++|+...+.++.+.++++. ++
T Consensus 163 ~l~~~A~~~G~~v~l~lE~~~~e~~~~~~~~t~~~~~~li---~~v~~pn~vgl~lD~~H~~~~g~d~~~~l~~~~~~~r 239 (386)
T 1muw_A 163 LLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTVGHALAFI---ERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGK 239 (386)
T ss_dssp HHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHH---TTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCeEEEEeeCCCCCcccccCCCHHHHHHHH---HHhCCccceEEEeeccchhhcCCCHHHHHHHhcccCc
Confidence 9999999999 9999999864211246789999999999 9999997 9999999999999999999999985 89
Q ss_pred ceeEEeccCCC-----CCCCCCCCcccH-HHHHHHHHHcCCCceEEEeeecC
Q psy13372 210 IGHVQIAQAPD-----RQEPHARGEIDY-AYVFELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 210 i~~vHi~d~~~-----~~~~g~~G~id~-~~i~~~L~~~gy~g~~~lE~~~~ 255 (273)
|.|||++|..+ +..+|+ |.+|+ ..+++.|++.||+|++++|+++.
T Consensus 240 I~~vHl~D~~g~~~d~~l~~G~-G~i~~~~~~~~~L~~~Gy~G~v~lE~~~~ 290 (386)
T 1muw_A 240 LFHIDLNGQSGIKYDQDLRFGA-GDLRAAFWLVDLLESAGYEGPRHFDFKPP 290 (386)
T ss_dssp BCCCEECBCCSSSSCCCBCTTS-SSHHHHHHHHHHHHHHTCCSCEEECCCCC
T ss_pred EEEEEeCCCCCCCCCCCccCCC-cchHHHHHHHHHHHhcCCCCceeeEEEec
Confidence 99999999422 124899 99975 99999999999999999998864
No 30
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=100.00 E-value=3.7e-35 Score=249.24 Aligned_cols=221 Identities=14% Similarity=0.117 Sum_probs=184.5
Q ss_pred CcccccccccccccccccCHHHHHHHHHHcCCCeEEecCC-------------CC--CCCHHHHHHHHHHcCCeeEEEec
Q psy13372 4 PSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP-------------PV--GVTLEQLVAAQTRHGLKQVLINT 68 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~-------------~~--~~~~~~~~~~l~~~gL~i~~~~~ 68 (273)
..||+|+++ +.+.+. ++++.++.++++||++||++.. .. ....+++++.++++||++++++.
T Consensus 8 ~~mklg~~~-~~~~~~--~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~ 84 (262)
T 3p6l_A 8 NGWRLGMQS-YSFHLF--PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGV 84 (262)
T ss_dssp TTEEEEEEG-GGGTTS--CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cCcEEEEEe-cccCCC--CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEec
Confidence 358999999 567776 9999999999999999999852 11 12368999999999999999876
Q ss_pred CCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 69 EVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
+.. . ..+.+++.++.|+.||++.|++++|. +.+++++++|+++||+++
T Consensus 85 ~~~----~---------~~~~~~~~i~~A~~lGa~~v~~~~~~-------------------~~~~~l~~~a~~~gv~l~ 132 (262)
T 3p6l_A 85 YVA----E---------KSSDWEKMFKFAKAMDLEFITCEPAL-------------------SDWDLVEKLSKQYNIKIS 132 (262)
T ss_dssp ECC----S---------STTHHHHHHHHHHHTTCSEEEECCCG-------------------GGHHHHHHHHHHHTCEEE
T ss_pred cCC----c---------cHHHHHHHHHHHHHcCCCEEEecCCH-------------------HHHHHHHHHHHHhCCEEE
Confidence 421 1 13468899999999999999998641 135788999999999999
Q ss_pred EccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCC----C----
Q psy13372 149 IEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAP----D---- 220 (273)
Q Consensus 149 lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~----~---- 220 (273)
+||++. .....+++++.+++ +. ++|++|+|+|++|+...+.++.++++.++++|.|+|++|.. +
T Consensus 133 ~En~~~----~~~~~~~~~~~~ll---~~-~~~~~g~~~D~~h~~~~g~d~~~~l~~~~~~i~~vH~~D~~~~~~~~~~~ 204 (262)
T 3p6l_A 133 VHNHPQ----PSDYWKPENLLKAI---SG-RSQSLGSCSDVGHWRREGLNQIDCLKQLKGRIISLHFKDIAPKKAGENEQ 204 (262)
T ss_dssp EECCSS----SSSSSSHHHHHHHH---TT-SCTTEEEEEEHHHHHHTTCCHHHHHHHTTTCEEEEEECEECCCCTTCSCC
T ss_pred EEeCCC----ccccCCHHHHHHHH---Hh-CCCceEEEechHHHHhcCCCHHHHHHHHhhhheEEeeccCCccccCcCcc
Confidence 999853 23456899999999 86 78999999999999999999999999999999999999974 1
Q ss_pred C-CCCCCCCcccHHHHHHHHHHcCCCceEEEeeec-----CCChHHHHHHHHHhh
Q psy13372 221 R-QEPHARGEIDYAYVFELLAREGYEGYVGLEYKP-----QGNTKEGLEEFLKTF 269 (273)
Q Consensus 221 ~-~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~-----~~~~~~~~~~~~~~~ 269 (273)
+ .++|+ |.+||..+++.|++.||+|++++|+.. .+...++++ |||+.
T Consensus 205 ~~~~~G~-G~id~~~~~~~l~~~gy~g~~~~E~~~~~~~~~~~~~~s~~-~l~~~ 257 (262)
T 3p6l_A 205 HDVIWGT-GILDVKGMLKELKSQNFKGVFSIEYEYNWENSVPDIKECIQ-YFNKT 257 (262)
T ss_dssp CEECTTS-SSSCHHHHHHHHHHTTCCEEEEECCCSSTTSCHHHHHHHHH-HHHHH
T ss_pred ccCCCCC-CccCHHHHHHHHHHCCCCeEEEEEeccCcCChHHHHHHHHH-HHHHH
Confidence 1 36899 999999999999999999999999863 234677888 88874
No 31
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=100.00 E-value=1.2e-34 Score=259.42 Aligned_cols=249 Identities=13% Similarity=0.146 Sum_probs=200.0
Q ss_pred CCCcccccccccccc-cc---c------ccCHHHHHHHHHHcCCCeEEec----CCCCC------CCHHHHHHHHHHcCC
Q psy13372 2 AAPSFKLAANLTLLF-ND---L------AANYLDKYRVAAELGFRYIESW----FPPVG------VTLEQLVAAQTRHGL 61 (273)
Q Consensus 2 ~~~~~k~~~~~~~~~-~~---~------~~~~~~~l~~~~~~G~~~vEl~----~~~~~------~~~~~~~~~l~~~gL 61 (273)
|.||+||+++.|.+. .. + ..++++.++.++++||++||++ .|.+. ...+++++.++++||
T Consensus 4 ~~~~~kfs~~~w~~~~~~~~~f~~~~~p~~~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL 83 (387)
T 1bxb_A 4 PKPEHRFTFGLWTVGNVGRDPFGDAVRERLDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGL 83 (387)
T ss_dssp CCGGGCEEEEHHHHTCCCCBTTBCCCSCCCCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTC
T ss_pred CCccceeeeeeccccCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCC
Confidence 468899999885432 11 1 2389999999999999999998 66431 246899999999999
Q ss_pred eeEEEecCCc-------cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHH
Q psy13372 62 KQVLINTEVD-------ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLI 134 (273)
Q Consensus 62 ~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~ 134 (273)
++.+++.... ++. .+++++.|+..++.++++|++|+.||++.|++++|..+.....+.+.+..++++++.|+
T Consensus 84 ~i~~~~~~~~~~p~~~~g~l-~~~d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~ 162 (387)
T 1bxb_A 84 KVPMVTANLFSDPAFKDGAF-TSPDPWVRAYALRKSLETMDLGAELGAEIYVVWPGREGAEVEATGKARKVWDWVREALN 162 (387)
T ss_dssp BCCEEECCCSSSGGGGGCST-TCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCTTCEESCGGGCGGGTHHHHHHHHHH
T ss_pred EEEEEecCCCCCccccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCccCCccCCHHHHHHHHHHHHH
Confidence 9988775321 122 33577889999999999999999999999999987532110001125678999999999
Q ss_pred HHHHHHhhC--CcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCc-eeEeeecccccccCCChHHHHHhcC--Cc
Q psy13372 135 YACAELERH--SLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGACR--DL 209 (273)
Q Consensus 135 ~l~~~a~~~--gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~~--~~ 209 (273)
+++++|+++ ||++++||++.....+.++.|++++.+++ +.+++|+ +|+|+|++|+...+.++.+.++.+. ++
T Consensus 163 ~l~~~a~~~g~gv~l~lE~~~~~~~~~~~~~t~~~~~~ll---~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~~~ 239 (387)
T 1bxb_A 163 FMAAYAEDQGYGYRFALEPKPNEPRGDIYFATVGSMLAFI---HTLDRPERFGLNPEFAHETMAGLNFVHAVAQALDAGK 239 (387)
T ss_dssp HHHHHHHHHTCCCEEEECCCSSSSSSEESSCSHHHHHHHH---TTSSSGGGEEECCBHHHHHHTTCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCCCCccCCCHHHHHHHH---HHcCCccceEEEEecCcccccCCCHHHHHHHhccCCc
Confidence 999999988 89999999875422256899999999999 9999999 9999999999998999999999998 99
Q ss_pred ceeEEeccCCCCC---CCCCCCcccHHHH---HHHHHHcCCCceEEEeeecC
Q psy13372 210 IGHVQIAQAPDRQ---EPHARGEIDYAYV---FELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 210 i~~vHi~d~~~~~---~~g~~G~id~~~i---~~~L~~~gy~g~~~lE~~~~ 255 (273)
|.|||++|..... ..+. |.+||..+ ++.|++.||+|++++|+++.
T Consensus 240 i~~vHl~D~~~~~~d~~l~~-G~~d~~~~~~i~~~L~~~Gy~G~i~~E~~~~ 290 (387)
T 1bxb_A 240 LFHIDLNDQRMSRFDQDLRF-GSENLKAAFFLVDLLESSGYQGPRHFDAHAL 290 (387)
T ss_dssp BCCEECCBCCSSSSCCCBCT-TSSCHHHHHHHHHHHHHTTCCSCEECCCCCC
T ss_pred EEEEEeCCCCCCCCcCCCCC-CCCCHHHHHHHHHHHHHcCCCCCeEEeeecc
Confidence 9999999974432 1225 66777666 99999999999999998764
No 32
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=100.00 E-value=1e-33 Score=253.93 Aligned_cols=247 Identities=15% Similarity=0.144 Sum_probs=199.7
Q ss_pred CCccccccccccccc-c----c------ccCHHHHHHHHHHcCCCeEEec----CCCCC------CCHHHHHHHHHHcCC
Q psy13372 3 APSFKLAANLTLLFN-D----L------AANYLDKYRVAAELGFRYIESW----FPPVG------VTLEQLVAAQTRHGL 61 (273)
Q Consensus 3 ~~~~k~~~~~~~~~~-~----~------~~~~~~~l~~~~~~G~~~vEl~----~~~~~------~~~~~~~~~l~~~gL 61 (273)
.|-.||+++.| .+. . + +.++++.++.++++||++||++ .|++. ...+++++.++++||
T Consensus 5 ~~~~~~s~~~W-~~~~~~~~~f~~~~~~~~~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL 83 (393)
T 1xim_A 5 TREDKFSFGLW-TVGWQARDAFGDATRTALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGL 83 (393)
T ss_dssp CGGGCEEEEHH-HHTCCCCBTTBCCSSCCCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred Ccccceeeeec-cccCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCC
Confidence 45568888764 333 1 1 2389999999999999999999 66541 346899999999999
Q ss_pred eeEEEecCCc-------cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHH
Q psy13372 62 KQVLINTEVD-------ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLI 134 (273)
Q Consensus 62 ~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~ 134 (273)
++.+++.... +.. .+++++.|+.+++.++++|++|+.||++.|++++|..+.....+.+.+..++++++.|+
T Consensus 84 ~i~~~~~~~f~~p~~~~g~l-~spd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G~~g~~~~~~~~~~~~~~~~~e~L~ 162 (393)
T 1xim_A 84 IVPMVTTNLFTHPVFKDGGF-TSNDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGGREGAEYDSAKDVSAALDRYREALN 162 (393)
T ss_dssp BCCEEECCCSSSGGGTTCST-TCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECTTSEESSGGGCCHHHHHHHHHHHHH
T ss_pred EEEEEecCCcCCcccccCCC-CCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCCCCCcCCccCCHHHHHHHHHHHHH
Confidence 9988876321 122 23577889999999999999999999999999988532210001125678999999999
Q ss_pred HHHHHHhhC--CcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCc-eeEeeecccccccCCChHHHHHhcC--Cc
Q psy13372 135 YACAELERH--SLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGACR--DL 209 (273)
Q Consensus 135 ~l~~~a~~~--gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~~--~~ 209 (273)
+++++|+++ ||++++||++....++.++.|.+++.+++ +.+++|+ +|+|+|++|+...+.++.+.++.++ ++
T Consensus 163 ~l~~~A~~~g~gv~l~lE~~~~~~~~~~~~~t~~~~~~ll---~~v~~~~~vgl~lD~gH~~~~g~d~~~~l~~~~~~~~ 239 (393)
T 1xim_A 163 LLAQYSEDRGYGLRFAIEPKPNEPRGDILLPTAGHAIAFV---QELERPELFGINPETGHEQMSNLNFTQGIAQALWHKK 239 (393)
T ss_dssp HHHHHHHHHTCCCEEEEECCSSSSSSEESSCSHHHHHHHH---TTSSSGGGEEECCBHHHHHTTTCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCcEEEEecCCCCCCCCCcCCCHHHHHHHH---HHhCCccceEEEEccCCccccCCCHHHHHHHhhhcCC
Confidence 999999988 99999999875422256899999999999 9999999 9999999999988999999999998 99
Q ss_pred ceeEEeccCCCCC-CC--CCCCcccHHHH---HHHHHHc-----CCCceEEEeeecC
Q psy13372 210 IGHVQIAQAPDRQ-EP--HARGEIDYAYV---FELLARE-----GYEGYVGLEYKPQ 255 (273)
Q Consensus 210 i~~vHi~d~~~~~-~~--g~~G~id~~~i---~~~L~~~-----gy~g~~~lE~~~~ 255 (273)
|.|||++|..+.. .+ +. |.+||..+ ++.|++. ||+|++++|+++.
T Consensus 240 i~~vHl~D~~~~~~d~~l~~-G~~d~~~i~~~~~~L~~~~~~~~Gy~G~i~lE~~~~ 295 (393)
T 1xim_A 240 LFHIDLNGQHGPKFDQDLVF-GHGDLLNAFSLVDLLENGPDGAPAYDGPRHFDYKPS 295 (393)
T ss_dssp BCCCEECBCCSSSSCCCBCT-TSSSHHHHHHHHHHHHSCGGGSCSCCSCEEECCCCC
T ss_pred EEEEEeCCCCCccccCCCCC-CCcCHHHHHHHHHHHHhccccccCCCCCeEEEeecc
Confidence 9999999985433 23 36 88999877 8999999 9999999998864
No 33
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=100.00 E-value=2.6e-31 Score=239.62 Aligned_cols=230 Identities=11% Similarity=0.070 Sum_probs=183.9
Q ss_pred HHHHHHHHHHcCCCeEEecC----CCCCCC-----------HHHHHHHHHHcCCeeEEEe--cCC-----ccccCCCCCc
Q psy13372 23 YLDKYRVAAELGFRYIESWF----PPVGVT-----------LEQLVAAQTRHGLKQVLIN--TEV-----DENFGYAAVK 80 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~----~~~~~~-----------~~~~~~~l~~~gL~i~~~~--~~~-----~~~~~~~~~~ 80 (273)
++++++.++++||++||++. |.+ .+ .+.+++.++++||.+...+ ++. .+.. .++++
T Consensus 82 ~~~ale~~a~lG~~~VE~~~~~~~p~~-~~~~e~~~~l~~~~~~lk~~l~~~GL~~~~~t~nl~~h~~y~~G~~-~spd~ 159 (438)
T 1a0c_A 82 VEAAFEFFDKINAPYFCFHDRDIAPEG-DTLRETNKNLDTIVAMIKDYLKTSKTKVLWGTANLFSNPRFVHGAS-TSCNA 159 (438)
T ss_dssp HHHHHHHHHHHTCSEEEEEHHHHSCCC-SSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECCCSSSGGGTTCST-TCSCH
T ss_pred HHHHHHHHHHcCCCEEEeccccccccc-cchhhhhccHHHHHHHHHHHHHHhCCceEeccccccCCCccccCCC-CCCCH
Confidence 34677779999999999984 332 22 3688999999999987632 221 1111 34688
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc--EEEEccCCCCCCC
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL--TALIEPVNQHSVP 158 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv--~i~lE~~~~~~~~ 158 (273)
+.|+.+++.++++|++|++||++.+++++|..+.....+.+.+..++++++.|++++++|++.|+ +|+|||++....+
T Consensus 160 evR~~ai~~lk~aId~A~~LGa~~vv~~~G~~G~~~~~~~~~~~~~~~~~e~L~~~~~~A~~~Gv~v~l~IEp~p~~~~~ 239 (438)
T 1a0c_A 160 DVFAYSAAQVKKALEITKELGGENYVFWGGREGYETLLNTDMEFELDNFARFLHMAVDYAKEIGFEGQFLIEPKPKEPTK 239 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSEESCGGGCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECCCSCSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEccCCCccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCCCCCC
Confidence 99999999999999999999999999999864221100111457889999999999999999975 9999998754334
Q ss_pred CcccCCHHHHHHHHHHHhhcCCCc-eeEeeecccccccCCChHHHHHhcC--CcceeEEeccCCCCCCCCC-----CCcc
Q psy13372 159 GYYLSSFRVAERLIRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGACR--DLIGHVQIAQAPDRQEPHA-----RGEI 230 (273)
Q Consensus 159 ~~~~~~~~~~~~li~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~~--~~i~~vHi~d~~~~~~~g~-----~G~i 230 (273)
+.++.|.+++.+++ +++++|+ ||+|+|++|++..+.++...++.+. ++|+|||++|++.+..|+. .+.+
T Consensus 240 ~~~~~t~~~al~li---~~vg~pn~vgv~lDt~H~~~~g~di~~~i~~~~~~~~L~hvHlnD~~~~~g~d~d~~p~~~~~ 316 (438)
T 1a0c_A 240 HQYDFDVANVLAFL---RKYDLDKYFKVNIEANHATLAFHDFQHELRYARINGVLGSIDANTGDMLLGWDTDQFPTDIRM 316 (438)
T ss_dssp EESSCSHHHHHHHH---HHTTCTTTEEEEEEHHHHHHTTCCHHHHHHHHHHTTCEEEEECCBCCTTSBSCCCBCCCCHHH
T ss_pred CcccCCHHHHHHHH---HHcCCCCeEEEEEEhhhhhhcCCCHHHHHHHhcCCCcEEEEECCCCCCCCCCCCCcCCCcchH
Confidence 67999999999999 9999998 9999999999999999999999874 8999999999865544433 0334
Q ss_pred cHHHHHHHHHHcCCC-ceEEEeeecCCC
Q psy13372 231 DYAYVFELLAREGYE-GYVGLEYKPQGN 257 (273)
Q Consensus 231 d~~~i~~~L~~~gy~-g~~~lE~~~~~~ 257 (273)
+|..+++.|++.||+ |++++|+++.+.
T Consensus 317 ~~~~i~~~L~~~GY~~G~v~~E~~p~~~ 344 (438)
T 1a0c_A 317 TTLAMYEVIKMGGFDKGGLNFDAKVRRA 344 (438)
T ss_dssp HHHHHHHHHHTTSCSSCCEEECCCCCTT
T ss_pred HHHHHHHHHHHhCCCCCceEEEeeccCC
Confidence 899999999999999 999999987643
No 34
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=100.00 E-value=3.8e-33 Score=237.25 Aligned_cols=227 Identities=19% Similarity=0.146 Sum_probs=182.2
Q ss_pred cccccccccccccc--ccCHHHHHHHHHHcCCCeEEecCCC---CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCc
Q psy13372 6 FKLAANLTLLFNDL--AANYLDKYRVAAELGFRYIESWFPP---VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVK 80 (273)
Q Consensus 6 ~k~~~~~~~~~~~~--~~~~~~~l~~~~~~G~~~vEl~~~~---~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~ 80 (273)
||+|+|++.+.... +.++++.++.++++||++||++... .. ..++++++++++||++++++.. .. ++++.
T Consensus 6 ~kl~~~~~~~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~~~~~~---~~-~~~~~ 80 (264)
T 1yx1_A 6 HPVSISLSSYGADLVRSRGQASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECVFSSPL---EL-WREDG 80 (264)
T ss_dssp CCEEEEGGGGCHHHHHHHCGGGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEEEEEEE---EE-ECTTS
T ss_pred CceeeechhhcchhccCcCHHHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEEEecch---hh-cCCch
Confidence 48999985554431 1278999999999999999998531 22 7899999999999999876532 11 11111
Q ss_pred hhHHHHH-HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCC
Q psy13372 81 GKESEFR-ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPG 159 (273)
Q Consensus 81 ~~~~~~~-~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~ 159 (273)
.+ +.+++.++.|+.||++.|++++|..... . .|++++++|+++||++++||+. .
T Consensus 81 -----~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~------~---------~l~~l~~~a~~~Gv~l~lEn~~-----~ 135 (264)
T 1yx1_A 81 -----QLNPELEPTLRRAEACGAGWLKVSLGLLPEQ------P---------DLAALGRRLARHGLQLLVENDQ-----T 135 (264)
T ss_dssp -----SBCTTHHHHHHHHHHTTCSEEEEEEECCCSS------C---------CHHHHHHHHTTSSCEEEEECCS-----S
T ss_pred -----hHHHHHHHHHHHHHHcCCCEEEEecCCCCcH------H---------HHHHHHHHHHhcCCEEEEecCC-----C
Confidence 23 6788999999999999999998765321 1 6889999999999999999974 2
Q ss_pred cccCCHHHHHHHHHHHhhc---CCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCC---CC----CCCCCCCc
Q psy13372 160 YYLSSFRVAERLIRELRAH---GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAP---DR----QEPHARGE 229 (273)
Q Consensus 160 ~~~~~~~~~~~li~~~~~~---~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~---~~----~~~g~~G~ 229 (273)
.+..+++++.+++ +.+ ++| +|+|+|++|+...++++.++++.++++|.|||+||++ +. ..||+ |.
T Consensus 136 ~~~~~~~~~~~ll---~~v~~~~~~-vg~~~D~g~~~~~~~d~~~~~~~~~~~i~~vHlkD~~~~~~~~~~~~~~G~-G~ 210 (264)
T 1yx1_A 136 PQGGRIEVLERFF---RLAERQQLD-LAMTFDIGNWRWQEQAADEAALRLGRYVGYVHCKAVIRNRDGKLVAVPPSA-AD 210 (264)
T ss_dssp HHHHCHHHHHHHH---HHHHHTTCS-EEEEEETTGGGGGTCCHHHHHHHHGGGEEEEEECEEEECTTSCEEEECCCH-HH
T ss_pred CCCCCHHHHHHHH---HHHHhcCCC-eEEEEehhhhhhcCCCHHHHHHHhhhhEEEEEeecccCCCCCceeeECCCC-CC
Confidence 3567889999999 777 877 9999999888887899999999999999999999963 22 47899 99
Q ss_pred -ccHHHHHHHHHHcCCCceEEEeeecC-C----ChHHHHHHHHHhhcc
Q psy13372 230 -IDYAYVFELLAREGYEGYVGLEYKPQ-G----NTKEGLEEFLKTFDL 271 (273)
Q Consensus 230 -id~~~i~~~L~~~gy~g~~~lE~~~~-~----~~~~~~~~~~~~~~~ 271 (273)
+||+.+++.|++ +||+++|+.+. . ...++++ |||+++.
T Consensus 211 ~id~~~~~~~L~~---~g~~~lE~~~~~~~~~~~~~~~~~-~l~~~~~ 254 (264)
T 1yx1_A 211 LQYWQRLLQHFPE---GVARAIEYPLQGDDLLSLSRRHIA-ALARLGQ 254 (264)
T ss_dssp HHHHHHHHTTSCT---TCEEEECSCCCSSCHHHHHHHHHH-HHHTSCC
T ss_pred ccCHHHHHHHhhc---CCeEEEEeCCCcccHHHHHHHHHH-HHHHcCC
Confidence 999999999987 78999998643 2 4678888 9998754
No 35
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=99.97 E-value=3.9e-30 Score=227.86 Aligned_cols=238 Identities=15% Similarity=0.154 Sum_probs=185.2
Q ss_pred HHHHHHHHHc-CCCeEEecCC---CC-C---CCHHHHHHHHHHcCCeeEEEec-CCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAEL-GFRYIESWFP---PV-G---VTLEQLVAAQTRHGLKQVLINT-EVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 24 ~~~l~~~~~~-G~~~vEl~~~---~~-~---~~~~~~~~~l~~~gL~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
.+.++.++++ ||++||+... .. . .+++++++.++++||+++++.. +..... . ..+..|++.++++++.|
T Consensus 33 ~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i-~-~~~~~r~~~ie~~k~~i 110 (386)
T 3bdk_A 33 PVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITVIESIPVHEDI-K-QGKPNRDALIENYKTSI 110 (386)
T ss_dssp SSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEEEECCCCCHHH-H-TTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEEEecccccccc-c-cCcHHHHHHHHHHHHHH
Confidence 4588999999 9999999842 11 1 2478999999999999998753 211111 1 12456899999999999
Q ss_pred HHHHHcCCCeEEec--C---------------CCCC--------------------CCCCC----------------CCC
Q psy13372 95 QYACALNIPAIHIM--S---------------GKTE--------------------SSRTQ----------------PIA 121 (273)
Q Consensus 95 ~~a~~lG~~~i~~~--~---------------G~~~--------------------~~~~~----------------~~~ 121 (273)
+.|+++|++.|... + |... +.+.. ..+
T Consensus 111 ~~aa~lGi~~v~~nf~p~~~w~rt~~~~~~~~G~~~~~f~~~~~~~~d~~~~~~~~pg~~~~~~~~~~~~~~~~y~~~~~ 190 (386)
T 3bdk_A 111 RNVGAAGIPVVCYNFMPVFDWTRSDLHHPLPDGSTSLAFLKSDLAGVDPVADDLNLPGWDSSYSKEEMKAIIENYRQNIS 190 (386)
T ss_dssp HHHHTTTCCEEEECCCSSCSCCCSEEEEECTTSCEEEEEEGGGGSSCCC--------------CCHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCCEEEEcCcccccccccccccccCCCccccccchhhhhcccchhhccCCCCccccccHHHHHHHHhhhccCCC
Confidence 99999999988751 1 1000 00000 122
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCC---CCcccCCHHHHHHHHHHHhhcCCCceeEeeeccccccc-CC
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTALIEPVNQHSV---PGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRI-CG 197 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~---~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~-~~ 197 (273)
.++.|+++++.|++++++|+++||++++||+++... -..+++|.+++.+++ +.+++|++|+|+|+||+... +.
T Consensus 191 ~e~~w~~l~~~L~~i~~~Aee~GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll---~~vdsp~~gl~lDtG~l~~~~~~ 267 (386)
T 3bdk_A 191 EEDLWANLEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFL---NLYDSEHNGITMCVGSYASDPKN 267 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCSHHHHHHHH---HTTCSTTEEEEEEHHHHHTSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCEEEEeeCCcccccccCCceeCCHHHHHHHH---HhcCCCCEEEEEccCchhhcCCC
Confidence 477899999999999999999999999999865321 124799999999999 99999999999999999865 88
Q ss_pred ChHHHHHhcC--CcceeEEeccCCCCC------CCC--CCCcccHHHHHHHHHHcCCCceEEEeeecC---------C--
Q psy13372 198 DLTHTFGACR--DLIGHVQIAQAPDRQ------EPH--ARGEIDYAYVFELLAREGYEGYVGLEYKPQ---------G-- 256 (273)
Q Consensus 198 ~~~~~i~~~~--~~i~~vHi~d~~~~~------~~g--~~G~id~~~i~~~L~~~gy~g~~~lE~~~~---------~-- 256 (273)
|+.+.|++++ +||.|||++|+.... .+| + |.+||..++++|++.||+||+++|+.+. +
T Consensus 268 D~~~~i~~~~~~~RI~hvHlkDv~~~~~gf~e~~~g~g~-G~vD~~~i~~aL~~~gY~G~i~~Eh~~~~~~~~~~~pg~~ 346 (386)
T 3bdk_A 268 DVLAMTEYALKRNRINFMHTRNVTAGAWGFQETAHLSQA-GDIDMNAVVKLLVDYDWQGSLRPDHGRRIWGDQTKTPGYG 346 (386)
T ss_dssp CHHHHHHHHHHTTCEEEEECCCEEEETTEEEECCSSGGG-SSCCHHHHHHHHHHTTCCBCEECCCCCBCTTCCCCSTTCC
T ss_pred CHHHHHHHhCCcCeEEEEeecCCCCCCCCccccCCCcCC-CCcCHHHHHHHHHHhCCceEEEccccccccccccCCCCcc
Confidence 9999999999 999999999963211 245 8 9999999999999999999999998652 1
Q ss_pred --ChHHHHHHHHHh
Q psy13372 257 --NTKEGLEEFLKT 268 (273)
Q Consensus 257 --~~~~~~~~~~~~ 268 (273)
+...+++ |||.
T Consensus 347 ~~~~~~~~~-ylrg 359 (386)
T 3bdk_A 347 LYDRALGAT-YFNG 359 (386)
T ss_dssp SHHHHHHHH-HHHH
T ss_pred HHHHHHHHH-HHHH
Confidence 1247888 8885
No 36
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=99.97 E-value=2.4e-30 Score=230.11 Aligned_cols=242 Identities=14% Similarity=0.120 Sum_probs=186.5
Q ss_pred CHHHHHHHHHHc-CCCeEEecCC---C----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAEL-GFRYIESWFP---P----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~~~~~~-G~~~vEl~~~---~----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
+..+.++.++++ ||++||+... . ...+++++++.++++||+++++..... .......+..++..++.+++.
T Consensus 22 ~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~~~~~~~~-~~~~~~~~~~r~~~i~~~~~~ 100 (367)
T 1tz9_A 22 GDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALLGIESVAI-HDAIKAGTDQRDHYIDNYRQT 100 (367)
T ss_dssp TCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEEEECSCCC-CHHHHHTCSTHHHHHHHHHHH
T ss_pred CChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEEEEecCCC-cHHHhcCCcCHHHHHHHHHHH
Confidence 567889999999 9999998743 1 112578999999999999997542110 000000145678899999999
Q ss_pred HHHHHHcCCCeEEe--cC-CCCC-CCCC----------------------------------------------------
Q psy13372 94 IQYACALNIPAIHI--MS-GKTE-SSRT---------------------------------------------------- 117 (273)
Q Consensus 94 i~~a~~lG~~~i~~--~~-G~~~-~~~~---------------------------------------------------- 117 (273)
++.|+++|++.|++ ++ +... ....
T Consensus 101 i~~a~~lG~~~v~~n~~p~~~w~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~lg~~~~~~~~~g~~~~~~~~~~~~ 180 (367)
T 1tz9_A 101 LRNLGKCGISLVCYSFKPIFGWAKTDLAYENEDGSLSLLFDQAVVENMQPEDMYQLIHSQSKGFRLPGWEEERLQQFQEL 180 (367)
T ss_dssp HHHHHHTTCCEEEECCCSSCSCCCSEEEEECTTSCEEEEEEHHHHHTSCHHHHHHHTTC---------CCHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCcCCccCccccccCCCcchhhhccHHHHhhcCHHHHHHHhcchhhcccCCCCccchHHHHHHH
Confidence 99999999999988 33 1000 0000
Q ss_pred ----CCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCC---CCcccCCHHHHHHHHHHHhhcCCCceeEeeecc
Q psy13372 118 ----QPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSV---PGYYLSSFRVAERLIRELRAHGISNVQLQFDFF 190 (273)
Q Consensus 118 ----~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~---~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~ 190 (273)
...+.++.++++++.|++++++|+++||++++||+++... .+.++.+++++.+++ +.+++|++|+++|++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~l~~l~~~A~~~Gv~l~lE~~~~~~~~~g~~~~~~t~~~~~~l~---~~v~~~~vgl~~D~~ 257 (367)
T 1tz9_A 181 KAMYAGVTEEDLVENLRYFLERVIPVCEEENIKMGIHPDDPPWEIFGLPRITKNLADLKRIL---SLVDSPANGITFCTG 257 (367)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHHHHHHHHHTCEEEECCCSSSSCBTTBCCCTTSHHHHHHHH---HHTCSTTEECCEETT
T ss_pred HhhccCCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEECCCcccccCCCcccCCHHHHHHHH---HhcCCCCEEEEEecC
Confidence 0011344589999999999999999999999999865321 135789999999999 999999999999999
Q ss_pred cc-cccCCChHHHHHhcCCcceeEEeccCC-CC--------CCCCCCCcccHHHHHHHHHHcCCCceEEEeeecC--CC-
Q psy13372 191 NA-QRICGDLTHTFGACRDLIGHVQIAQAP-DR--------QEPHARGEIDYAYVFELLAREGYEGYVGLEYKPQ--GN- 257 (273)
Q Consensus 191 h~-~~~~~~~~~~i~~~~~~i~~vHi~d~~-~~--------~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~~--~~- 257 (273)
|+ ...+.|+.+++++++++|.|||+||.+ ++ +.+|+ |.+||..++++|++.||+|++++|+.+. .+
T Consensus 258 h~~~~~g~d~~~~i~~~~~rI~~vHlkD~~~~~~~~~~~~~~~~G~-G~id~~~il~~L~~~gy~G~i~~E~~~~~~~~~ 336 (367)
T 1tz9_A 258 SLGADPTNDLPTMIREIGHRINFVHFRNVKYLGEHRFEETAHPSVA-GSLDMAELMQALVDVGYEGVIRPDHGRAIWDEK 336 (367)
T ss_dssp HHHHSTTSCHHHHHHHHGGGCCCEEECCEEECSSSEEEECCSSGGG-SSSCHHHHHHHHHHHTCCSEEEECCCCBCTTCC
T ss_pred chhhhcCCCHHHHHHHHhhhEEEEEEecCCCCCCCccccccCCCCC-CCcCHHHHHHHHHHcCCCeEEEeecchhhcccc
Confidence 99 788899999999999999999999964 21 22388 9999999999999999999999998532 11
Q ss_pred ---------hHHHHHHHHHhh
Q psy13372 258 ---------TKEGLEEFLKTF 269 (273)
Q Consensus 258 ---------~~~~~~~~~~~~ 269 (273)
...+++ |||..
T Consensus 337 ~~p~y~~~~~~~~~~-~l~~~ 356 (367)
T 1tz9_A 337 AMPGYGLYDRAMGLT-YIQGL 356 (367)
T ss_dssp SCTTSSSHHHHHHHT-HHHHH
T ss_pred CCCCccHHHHHHHHH-HHHHH
Confidence 357888 88863
No 37
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=99.97 E-value=2.4e-30 Score=218.60 Aligned_cols=219 Identities=15% Similarity=0.144 Sum_probs=176.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC-CCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG-VTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
++++.++.++++||+ ||++..... .....++++.++. | .++++..+.+.+. .+++++.++..++.++++++.|+.
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~~~~~l-~~~~~~~r~~~~~~~~~~i~~A~~ 87 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFSG-KLSVHLPFWNLDL-LSPDPEVRGLTLRRLLFGLDRAAE 87 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCCS-CEEEECCCTTCCT-TCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhCC-CeEEecCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999 999754211 1222677777777 6 5555443322233 235788999999999999999999
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
+|++.|++++|...... +...++.++++++.|++++++|+++||++++||++. .+++++.+++ +.++
T Consensus 88 lGa~~v~~~~g~~~~~~--~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~--------~~~~~~~~l~---~~v~ 154 (254)
T 3ayv_A 88 LGADRAVFHSGIPHGRT--PEEALERALPLAEALGLVVRRARTLGVRLLLENSHE--------PHPEALRPVL---EAHA 154 (254)
T ss_dssp TTCSEEEEECCCCTTCC--HHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEECSSC--------SSGGGTHHHH---HHHT
T ss_pred hCCCEEEECCCCCcccc--cccHHHHHHHHHHHHHHHHHHHhhcCCEEEEcCCCC--------CCHHHHHHHH---HhcC
Confidence 99999999998764321 001356789999999999999999999999999752 2788999999 9999
Q ss_pred CCceeEeeecccccccCCC-hHH-HHHhcCCcceeEEeccCCC---CC-CCCCCCcccHHHHHH-HHHHcCCCceEEEee
Q psy13372 180 ISNVQLQFDFFNAQRICGD-LTH-TFGACRDLIGHVQIAQAPD---RQ-EPHARGEIDYAYVFE-LLAREGYEGYVGLEY 252 (273)
Q Consensus 180 ~~~~g~~~D~~h~~~~~~~-~~~-~i~~~~~~i~~vHi~d~~~---~~-~~g~~G~id~~~i~~-~L~~~gy~g~~~lE~ 252 (273)
|++|+|+|++|+...+.+ +.+ +++ +++ .|+|++|+.+ ++ .||+ |.+||..+++ .|++ ++++|+
T Consensus 155 -~~vg~~~D~~H~~~~g~~~~~~~~~~-~~~--~~vHl~D~~~~~~~~~~~G~-G~id~~~i~~~~L~~-----~~~lE~ 224 (254)
T 3ayv_A 155 -GELGFCFDAAHARVFSRTPDPGPWLA-LAP--EHLHLNDTDGVYDRHWNLGR-GVLGHGAWLRPYLDR-----TMVLEV 224 (254)
T ss_dssp -TSSEEEEEHHHHHHHSSCCSSHHHHT-TCC--SEEEECBCCSSSCCCBCTTS-SSSCGGGTSGGGTTS-----EEEECC
T ss_pred -cCEEEEEEchhhHHhCCCchhHHHHH-cCC--CEEEEeCCCCCCCCCCCCCC-CccCHHHHHHHHhcC-----CEEEEe
Confidence 999999999999988876 566 788 776 9999999743 23 6899 9999999999 9986 999998
Q ss_pred ecCCChHHHHHHHHHhh
Q psy13372 253 KPQGNTKEGLEEFLKTF 269 (273)
Q Consensus 253 ~~~~~~~~~~~~~~~~~ 269 (273)
.+...++++ |+|+.
T Consensus 225 --~~~~~~s~~-~l~~~ 238 (254)
T 3ayv_A 225 --REDPEASLA-FLQAL 238 (254)
T ss_dssp --SSCTHHHHH-HHHHH
T ss_pred --chHHHHHHH-HHHHH
Confidence 468899999 99875
No 38
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=99.90 E-value=8e-22 Score=176.49 Aligned_cols=228 Identities=12% Similarity=0.099 Sum_probs=174.8
Q ss_pred cCHHHHHHHHHHc-CC----CeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecC--C-------c---cccCCCCCchhH
Q psy13372 21 ANYLDKYRVAAEL-GF----RYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTE--V-------D---ENFGYAAVKGKE 83 (273)
Q Consensus 21 ~~~~~~l~~~~~~-G~----~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~--~-------~---~~~~~~~~~~~~ 83 (273)
.+++|.++.+++. |+ .+|++..|++..+.+++++.++++||.+.+++.. . . ++. .+++++.|
T Consensus 76 r~~~e~~~d~~~v~~l~~~~~~v~lH~p~d~~d~~~lk~~l~e~GL~l~~i~~~~f~hp~~~~~~Y~~GnL-tspD~~vR 154 (438)
T 3m0m_A 76 RGIFDKLDDCAVIQQLTRATPNVSLHIPWDKADPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSL-SHTNAATR 154 (438)
T ss_dssp CSHHHHHHHHHHHHHHHSCCCEEEEETTTTCCCHHHHHHHHHHHTCEEEEEECCCSSCCTTCSSCCTTCST-TCSSHHHH
T ss_pred CCHHHHHHHHHHHhcccCCCcceeecCCccHHHHHHHHHHHHHcCCceEEeecccccCchhcccccccCCC-CCcCHHHH
Confidence 6799999988774 44 4679999876578999999999999999876641 1 1 122 34689999
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc--
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY-- 161 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~-- 161 (273)
+.+++.+++.|+.|++||++.+++|+|. +.......+.+..+++++++|+++++++. .||+++|||.+.. ++.+
T Consensus 155 ~~Ai~~lk~~Id~A~~LGa~~lv~w~Gd-G~~~~~~~d~~~a~~rl~esL~ei~~~A~-~gv~l~LE~Kp~E--p~~~~~ 230 (438)
T 3m0m_A 155 AQAVEHNLECIEIGKAIGSKALTVWIGD-GSNFPGQSNFTRAFERYLSAMAEIYKGLP-DDWKLFSEHKMYE--PAFYST 230 (438)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCCC-EESSTTTSCHHHHHHHHHHHHHHHHHTCC-TTCEEEEECCSSS--SCSSEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEECCC-ccCCCCcCCHHHHHHHHHHHHHHHHHhhh-cCCEEEEccCCCc--CCccee
Confidence 9999999999999999999999999972 11100001257889999999999999986 4999999986432 4433
Q ss_pred -cCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhc--CCcceeEEeccCCC---CCCCCCCCc-ccHHH
Q psy13372 162 -LSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC--RDLIGHVQIAQAPD---RQEPHARGE-IDYAY 234 (273)
Q Consensus 162 -~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~--~~~i~~vHi~d~~~---~~~~g~~G~-id~~~ 234 (273)
+.+..++..++ ++++ |++|+|+|++|++. +.++.+.+..+ ..++.|+|++|+.. -+.+|. +. .++..
T Consensus 231 ~~~d~~~~l~li---~~vg-~~vgv~LDtgH~~~-ge~i~~~ia~~~~~gkL~hvHvnD~~r~D~D~~~g~-~~~~e~~~ 304 (438)
T 3m0m_A 231 VVQDWGTNYLIA---QTLG-PKAQCLVDLGHHAP-NTNIEMIVARLIQFGKLGGFHFNDSKYGDDDLDAGA-IEPYRLFL 304 (438)
T ss_dssp TTCSHHHHHHHH---HHHC-TTEEEEEETTSSCT-TCCHHHHHHHHHHTTCEEEEEECBCSSSSCCBCTTS-SCHHHHHH
T ss_pred cchhHHHHHHHH---HHhC-CCEEEEEECCCCCC-CCCHHHHHHHHHhcCCEEEEEcCCCCCCCCCccCCC-CCHHHHHH
Confidence 44666799999 9999 99999999999977 88999988875 35899999999732 124555 44 57888
Q ss_pred HHHHHHHc------CCCceEEEeeec-CCChH
Q psy13372 235 VFELLARE------GYEGYVGLEYKP-QGNTK 259 (273)
Q Consensus 235 i~~~L~~~------gy~g~~~lE~~~-~~~~~ 259 (273)
++..|.+. +|.|++.++..+ ..++.
T Consensus 305 i~~eL~~~g~~~~~~~~g~~~fDas~~~~d~i 336 (438)
T 3m0m_A 305 VFNELVDAEARGVKGFHPAHMIDQFHNVTDPI 336 (438)
T ss_dssp HHHHHHHHHHTTCTTCCCEEEECCCBSSSCHH
T ss_pred HHHHHHHcCCCCccCCCcCeEeeCCCCCCCch
Confidence 88888774 688899999664 34433
No 39
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=99.84 E-value=2.4e-20 Score=160.69 Aligned_cols=205 Identities=17% Similarity=0.084 Sum_probs=161.3
Q ss_pred cCHHHHHHHHHHcCCCeEEecC---C-C-----C-------CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWF---P-P-----V-------GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKES 84 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~---~-~-----~-------~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
.++.++++++++.|++.+++.. | + . ..+++++++.++++|+.++.+ .++..+.+ +++++.++
T Consensus 61 ~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H-~py~iNL~-S~~~e~re 138 (301)
T 2j6v_A 61 RDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMH-PGQYVNPG-SPDPEVVE 138 (301)
T ss_dssp HHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEEC-CCTTCCTT-CSCHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEe-CchhhcCC-CCCHHHHH
Confidence 4688889999999999999963 2 1 1 123578899999999988764 44333443 36789999
Q ss_pred HHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 85 EFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
.+++.++..++.|+.||++ .+++|+|..... .+..++++++.|++ ++.++. +++|||++. +
T Consensus 139 ~Si~~l~~~l~~a~~lG~~~a~~v~HpG~~~~~------~e~~~~r~~e~l~~-~~~a~~---~l~lEn~~~-------~ 201 (301)
T 2j6v_A 139 RSLAELRYSARLLSLLGAEDGVLVLHLGGAYGE------KGKALRRFVENLRG-EEEVLR---YLALENDER-------L 201 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEEECCCCTTC------HHHHHHHHHHHHTT-CHHHHH---HEEEECCSS-------S
T ss_pred HHHHHHHHHHHHHHHcCCCCCEEEECCCcCCCC------HHHHHHHHHHHHhH-HHhhcc---eEEEEeCCC-------C
Confidence 9999999999999999965 999999964222 46789999999999 888876 999999863 5
Q ss_pred CCHHHHHHHHHHHhhcCCCceeEeeecccccccC---CChHHHHHhcCC---cceeEEeccCC-----CCC-CCCCCCcc
Q psy13372 163 SSFRVAERLIRELRAHGISNVQLQFDFFNAQRIC---GDLTHTFGACRD---LIGHVQIAQAP-----DRQ-EPHARGEI 230 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~---~~~~~~i~~~~~---~i~~vHi~d~~-----~~~-~~g~~G~i 230 (273)
.+++++.+++ +.++ +|+|+|+ |....+ .++.+.++.+.+ ++.|+|++|+. +++ .+|+ | +
T Consensus 202 ~t~~el~~l~---~~~~---vgvclDt-H~~~~g~~~~~~~~~~~~~~~~~~~~~hiHlsd~~~~~~~drH~~ig~-G-~ 272 (301)
T 2j6v_A 202 WNVEEVLKAA---EALG---VPVVVDT-LHHALNPGRLPLEEALRLAFPTWRGRPKVHLASQDPKKRPGAHAFRVT-R-E 272 (301)
T ss_dssp CCHHHHHHHH---HHHT---CCEEEEH-HHHHHSCTTCCHHHHHHHHGGGCSSCCEEEECCBCTTSSTTCBCSSCC-H-H
T ss_pred CCHHHHHHHH---hcCC---CEEEEeH-HHHhcCCCCCChHHHHHHHHHHHhhCCEEEECCCCCCCCCCccccccC-C-c
Confidence 6899999999 8884 9999999 765544 356777777654 45999999863 344 4688 9 8
Q ss_pred cHHHHHHHHHHcCCCceEEEeeecCC
Q psy13372 231 DYAYVFELLAREGYEGYVGLEYKPQG 256 (273)
Q Consensus 231 d~~~i~~~L~~~gy~g~~~lE~~~~~ 256 (273)
||..+++.|+. ++++++|.+..+
T Consensus 273 ~f~~~~~~L~~---~~~~~iEak~ke 295 (301)
T 2j6v_A 273 DWERLLSALPG---PADVMVEAKGKE 295 (301)
T ss_dssp HHHHHHHHCSS---CEEEEECCTTGG
T ss_pred cHHHHHHHHhh---CCcEEEEeCChh
Confidence 99999999873 789999987544
No 40
>3p14_A L-rhamnose isomerase; TIM barrel; 2.51A {Bacillus halodurans} SCOP: c.1.15.2 PDB: 3uu0_A 3uva_A 3uxi_A
Probab=99.42 E-value=2.3e-11 Score=106.45 Aligned_cols=221 Identities=13% Similarity=0.015 Sum_probs=155.3
Q ss_pred cccCHHHHHHHHHHc-----CCCeEEec----------CCCC---CCCHHHHHHHHHHcCCeeEEEec--CCc--cccC-
Q psy13372 19 LAANYLDKYRVAAEL-----GFRYIESW----------FPPV---GVTLEQLVAAQTRHGLKQVLINT--EVD--ENFG- 75 (273)
Q Consensus 19 ~~~~~~~~l~~~~~~-----G~~~vEl~----------~~~~---~~~~~~~~~~l~~~gL~i~~~~~--~~~--~~~~- 75 (273)
...+++|.++-+.+. |-..|.++ .|++ ..+.+++++.++++||.+. ++. +.. +..|
T Consensus 72 ~ar~~~E~~~D~~~~~~l~~~~~~v~LH~~y~~~~~~~v~~d~~~p~~f~~~~~~a~e~GL~l~-~n~n~Fshp~yk~G~ 150 (424)
T 3p14_A 72 KATTPEELRMDLEKALSLIPGKHRVNLHAIYAETDGKVVERDQLEPRHFEKWVRWAKRHGLGLD-FNPTLFSHEKAKDGL 150 (424)
T ss_dssp CCCSHHHHHHHHHHHHTTSSSCCEEEEEGGGCCCTTCCCCGGGCCGGGGHHHHHHHHHHTCEEE-EECCCSSSGGGTTSC
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcceecchhhhccCCCcCCccccChhhHHHHHHHHHHcCCcee-eccCCCCChhhcCCc
Confidence 345778887766554 56688888 3332 1357899999999999999 764 221 1122
Q ss_pred --CCCCchhHHHHHHHHHHHHHHHHH----cCCC-eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhh-CCcEE
Q psy13372 76 --YAAVKGKESEFRASLEKTIQYACA----LNIP-AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELER-HSLTA 147 (273)
Q Consensus 76 --~~~~~~~~~~~~~~~~~~i~~a~~----lG~~-~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~i 147 (273)
.++||++|+.+++..+++++++++ ||++ .++++.+. +.. +-|.+....+++++++|+++.+..-+ .++++
T Consensus 151 alTnPD~~VR~~AI~h~k~~idia~~~G~~LGs~~~~~lW~~D-G~k-dyp~D~~~~~~rl~esL~eI~~~~~d~~~~r~ 228 (424)
T 3p14_A 151 TLAHPDQAIRQFWIDHCIASRKIGEYFGKELETPCLTNIWIPD-GYK-DTPSDRLTPRKRLKESLDQIFAAEINEAYNLD 228 (424)
T ss_dssp STTCSSHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEECCCC-EES-SCCSCSHHHHHHHHHHHHHHTCSCCCTTTEEE
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEeCCC-CCc-CCCCCHHHHHHHHHHHHHHHHhhccCCcCceE
Confidence 347899999999999999999999 8899 78888742 111 01223778899999999999665432 45899
Q ss_pred EEccCCCCCCCCcccC---CHHHHHHHHHHHhhcCCCceeEeeecccccccCCChH-HHHHhc--CCcceeEEeccCCC-
Q psy13372 148 LIEPVNQHSVPGYYLS---SFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLT-HTFGAC--RDLIGHVQIAQAPD- 220 (273)
Q Consensus 148 ~lE~~~~~~~~~~~~~---~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~-~~i~~~--~~~i~~vHi~d~~~- 220 (273)
+||+-+.. |+.... +.+-...++ .. .++++|+|+||+.. +.++. ..+..+ .+++. +|+++...
T Consensus 229 aIE~KpfE--P~~~sytvgs~df~~~y~---~~---~~~~v~lD~GH~~p-geni~d~~vA~ll~~gkLg-lH~Nrg~~w 298 (424)
T 3p14_A 229 AVESKLFG--IGSESYVVGSHEFYLSYA---LK---NDKLCLLDTGHYHP-TETVSNKISAMLLFHDKLA-LHVSRPVRW 298 (424)
T ss_dssp EEECCSCB--TTBCSEESSCHHHHHHHH---HH---TTCEEEEETTSSCT-TCCGGGTHHHHTTTCSCEE-EEECBCSSS
T ss_pred EEecCCCC--CCccccccCchHHHHHHH---Hh---hCcEeeeecccccC-CCCHHHHHHHHHHHCCCeE-EECCCCCCC
Confidence 99997654 443322 345556666 43 27999999999985 88888 444443 47887 99998532
Q ss_pred --CCCCCCCCcccHHHHHHHHHHcCCC--ceEEEeeec
Q psy13372 221 --RQEPHARGEIDYAYVFELLAREGYE--GYVGLEYKP 254 (273)
Q Consensus 221 --~~~~g~~G~id~~~i~~~L~~~gy~--g~~~lE~~~ 254 (273)
-+.+|. .+ ....++..|.+.||. +.+.+.+++
T Consensus 299 DdDlvvgs-~d-e~~~i~~Elvr~g~~~~~~i~lD~fD 334 (424)
T 3p14_A 299 DSDHVVTF-DD-ELREIALEIVRNDALDRVLIGLDFFD 334 (424)
T ss_dssp SCCBCCCS-CH-HHHHHHHHHHHTTCTTTEEEEECCCC
T ss_pred CCCcccCc-HH-HHHHHHHHHHHcCCCCCceeeeeecc
Confidence 124566 55 677778888888984 568887765
No 41
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=98.86 E-value=1.4e-06 Score=74.07 Aligned_cols=208 Identities=12% Similarity=0.082 Sum_probs=143.7
Q ss_pred cCHHHHHHHHHHcCCCeEEecC---CCC-----CC--------CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWF---PPV-----GV--------TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKES 84 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~---~~~-----~~--------~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
.++..++++..+.|+...-+.. |+. .. ..+++.+.++++|++++.+-. .+..-.++++++.+
T Consensus 60 ~~l~~il~~n~~~~I~~yRiSS~l~P~~thp~~~~~~~~~~~~~l~~iG~~a~~~~iRLS~HPg--qF~vL~S~~~~Vv~ 137 (310)
T 3tc3_A 60 LCLKNILEWNLKHEILFFRISSNTIPLASHPKFHVNWKDKLSHILGDIGDFIKENSIRISMHPG--QYVVLNSVREEVVR 137 (310)
T ss_dssp HHHHHHHHHHHHTTCCEEECCTTSSTTTTSTTCCCCHHHHTHHHHHHHHHHHHHTTCEEEECCC--TTCCTTCSSHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCcccCCCccccccccchHHHHHHHHHHHHHHHHHcCcEEEecCC--CCccCCCCCHHHHH
Confidence 3678889999999999998883 421 01 246888999999999987522 22221246789999
Q ss_pred HHHHHHHHHHHHHHHcCCC-eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccC
Q psy13372 85 EFRASLEKTIQYACALNIP-AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLS 163 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~-~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~ 163 (273)
+++..+.-..+++..||.. .|++|.|+.-.+ .+...+++++.+.+|-+-++. +|.|||-. -.-
T Consensus 138 ~SI~dL~yHa~~ld~mG~~~~i~IH~Gg~yGd------K~~al~Rf~~n~~~L~~~vk~---RL~lENDd-------k~~ 201 (310)
T 3tc3_A 138 SSIMELKYHADLLDSMGIEGKIQIHVGSSMNG------KEESLNRFIENFRKLPSNISK---RLVIENDD-------KVF 201 (310)
T ss_dssp HHHHHHHHHHHHHHHHTCCCEEEEECCCCTTC------HHHHHHHHHHHHTTSCHHHHT---TEEEECCS-------SSC
T ss_pred HHHHHHHHHHHHHHhcCCCcCceeecCCcCCC------HHHHHHHHHHHHHhCCHhhhe---EEEEecCC-------cee
Confidence 9999999999999999986 688898875443 678899999999998888877 79999943 246
Q ss_pred CHHHHHHHHHHHhhcCCCceeEeeecccccc--cCCChHHHHHhcC---CcceeEEeccCCCCCCCCC-CCcccHHHHHH
Q psy13372 164 SFRVAERLIRELRAHGISNVQLQFDFFNAQR--ICGDLTHTFGACR---DLIGHVQIAQAPDRQEPHA-RGEIDYAYVFE 237 (273)
Q Consensus 164 ~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~--~~~~~~~~i~~~~---~~i~~vHi~d~~~~~~~g~-~G~id~~~i~~ 237 (273)
|.++++.++ ++++ +=++||..|... .+.++.+.+.+.. +.---+|++.......|+. ...++...+..
T Consensus 202 sv~dlL~i~---~~~g---IPiVfD~hHh~~~~~~~~~~e~~~~~~~TW~~rP~~H~S~~~~~~~~raHsd~i~~~~~~~ 275 (310)
T 3tc3_A 202 SVKDCLWIS---ERTG---IPVIFDNLHHSILNNGESLNDALSLVRRTWKDRPMIDYSEQEPGEKPGVHATTINEENFRR 275 (310)
T ss_dssp CHHHHHHHH---HHHC---CCEEEEHHHHHHSCSSCCHHHHHHHHHTTCSSCCEEEECCBCTTSCTTCBCSSCCHHHHHH
T ss_pred cHHHHHHHH---hhcC---CCeEeeHhhHHhcCCCCCHHHHHHHHHHhCCCCCCeEeCCCCCCCCCCcccccCCHHHHHH
Confidence 899999999 8885 558999988654 3445666666542 2234589986321112222 14555555555
Q ss_pred HHHHcCCCceEEEeee
Q psy13372 238 LLAREGYEGYVGLEYK 253 (273)
Q Consensus 238 ~L~~~gy~g~~~lE~~ 253 (273)
.+.... +--+.+|.+
T Consensus 276 ~~~~~~-~~DiMiEAK 290 (310)
T 3tc3_A 276 FVNEVD-EVDIMLEVK 290 (310)
T ss_dssp HHHHCC-SEEEEECST
T ss_pred HhccCC-CeEEEEEeC
Confidence 555432 222444543
No 42
>1d8w_A L-rhamnose isomerase; beta-alpha-8-barrels, aldose-ketose isomerization, hydride shift; 1.60A {Escherichia coli} SCOP: c.1.15.2 PDB: 1de5_A* 1de6_A*
Probab=98.26 E-value=6.4e-05 Score=64.87 Aligned_cols=218 Identities=11% Similarity=0.049 Sum_probs=144.5
Q ss_pred ccCHHHHHHHHHHc-----CCCeEEecCCC-------C-----CCCHHHHHHHHHHcCCeeEEEecC--Cc--cccC---
Q psy13372 20 AANYLDKYRVAAEL-----GFRYIESWFPP-------V-----GVTLEQLVAAQTRHGLKQVLINTE--VD--ENFG--- 75 (273)
Q Consensus 20 ~~~~~~~l~~~~~~-----G~~~vEl~~~~-------~-----~~~~~~~~~~l~~~gL~i~~~~~~--~~--~~~~--- 75 (273)
..+++|.++-+.+. |-..|-++.+| + ..+.+.+++..+++||.+- ++.. .. +..|
T Consensus 76 aR~~~El~~D~~~v~~Lipg~~rvnLH~~y~~~~~~vDrd~~~~~hf~~w~~~Ak~~GlglD-fNpt~Fshp~~k~G~SL 154 (426)
T 1d8w_A 76 ARNASELRADLEQAMRLIPGPKRLNLHAIYLESDTPVSRDQIKPEHFKNWVEWAKANQLGLD-FNPSCFSHPLSADGFTL 154 (426)
T ss_dssp CCSHHHHHHHHHHHHHTSCSCEEEEEEGGGCCCSSCCCGGGCCGGGGHHHHHHHHHTTCEEE-EECCCSSSGGGTTSCST
T ss_pred CCCHHHHHHHHHHHHHhcCCCCceEeeeeeccCCCcccccccchhhHHHHHHHHHHhCCCcC-cCCCccCCccccCCCcc
Confidence 35677776655444 67788888764 2 1256899999999999998 7752 22 1222
Q ss_pred CCCCchhHHHHHHHHHHHHHHHH----HcCCCe-EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHH-hhCCcEEEE
Q psy13372 76 YAAVKGKESEFRASLEKTIQYAC----ALNIPA-IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAEL-ERHSLTALI 149 (273)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~a~----~lG~~~-i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~gv~i~l 149 (273)
.+++++.|+..++..+++++++. ++|.++ +.++.+.-..+ .|.+.-...+++.++|.++-... ...+++.++
T Consensus 155 shpD~~IR~fwI~H~~~c~~I~~~~g~~lGs~~v~niWi~DG~kd--~P~dr~~~r~Rl~eSLdeI~a~~~d~~~~~~~v 232 (426)
T 1d8w_A 155 SHADDSIRQFWIDHCKASRRVSAYFGEQLGTPSVMNIWIPDGMKD--ITVDRLAPRQRLLAALDEVISEKLNPAHHIDAV 232 (426)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEECCCCEESS--CCSCSHHHHHHHHHHHHHHTCSCCCTTTEEEEE
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccceeecCCCCCC--CCcchHhHHHHHHHHHHHHHHhhcCCccceeee
Confidence 23689999999999999999999 999999 78776432111 12235566778888888775433 246789999
Q ss_pred ccCCCCCCCC---cccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhc---CCcceeEEeccC---CC
Q psy13372 150 EPVNQHSVPG---YYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC---RDLIGHVQIAQA---PD 220 (273)
Q Consensus 150 E~~~~~~~~~---~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~---~~~i~~vHi~d~---~~ 220 (273)
|---.. ++ +-..+.+=..-+. - .++.-+|+|+||..- ++++.+.|-.+ .+++ .+|++-. ++
T Consensus 233 E~KlFg--ig~EsYtvgs~df~~~Ya---~---~~~a~~llD~GH~hP-tenIedkIsa~Ll~~~~L-~lH~sRpvrWDS 302 (426)
T 1d8w_A 233 ESKLFG--IGAESYTVGSNEFYMGYA---T---SRQTALCLDAGHFHP-TEVISDKISAAMLYVPQL-LLHVSRPVRWDS 302 (426)
T ss_dssp ECCSCB--TTBCSEESSCHHHHHHHH---H---HHTCEEEEETTSSCT-TCCHHHHHHHHTTTSSCE-EEEECBCSSSSC
T ss_pred eeeccc--cccceeeccchHHHHHhh---c---CCCcEEEEeCCCCCC-CCcHHHHHHHHHHcCCce-eEeecCCccccc
Confidence 964322 22 3355666666666 4 377899999999975 67888666654 5778 8999831 12
Q ss_pred CC-CCCCCCcccHHHHHHHHHHcCC-Cc-eEEEeee
Q psy13372 221 RQ-EPHARGEIDYAYVFELLAREGY-EG-YVGLEYK 253 (273)
Q Consensus 221 ~~-~~g~~G~id~~~i~~~L~~~gy-~g-~~~lE~~ 253 (273)
.+ ..++ . ....|+..+-+.|. +. .+.+.++
T Consensus 303 dhVv~~D-D--el~~I~~EiVr~~~l~~v~~~lDff 335 (426)
T 1d8w_A 303 DHVVLLD-D--ETQAIASEIVRHDLFDRVHIGLDFF 335 (426)
T ss_dssp CBCCCSS-H--HHHHHHHHHHHTTGGGTEEEEECCC
T ss_pred ccceecC-H--HHHHHHHHHHhcCcccceeehhhhh
Confidence 23 2333 2 55666666666653 33 3566655
No 43
>3bww_A Protein of unknown function DUF692/COG3220; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.20A {Haemophilus somnus}
Probab=98.00 E-value=2.4e-05 Score=66.03 Aligned_cols=175 Identities=10% Similarity=0.036 Sum_probs=107.2
Q ss_pred HHHHHHHHHcCCCeEEecCC-C---CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFP-P---VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~-~---~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.+.+.....-..+.+|+... + +......+.++.++ ..++.+++... .|. ..+-. .+++++.-+++.+
T Consensus 16 ~~~l~~~~~~~idf~Ev~~EN~~~~gg~~~~~L~~i~e~--~Pl~~HGv~LS--lG~-~~pld----~~~L~~lk~l~~~ 86 (307)
T 3bww_A 16 EGFLQLRNNDRIQFMEIAPENWIKMGGFARYQFDKVAEK--IPILIHGLSLS--LGG-QAPLD----KELLSSIKAMIKQ 86 (307)
T ss_dssp HHHHHCSSSSSSCCEEECHHHHHTCCHHHHHHHHHHTTT--SCEEEBCSCCC--TTC-SSCCC----HHHHHHHHHHHHH
T ss_pred HHHHhhccCCCCCEEEEecccccCCCCchHHHHHHHHhc--CCEEEeecccc--ccC-CCCCC----HHHHHHHHHHHHH
Confidence 44443224556899999843 1 21223455555544 45555554321 111 12222 2567778888889
Q ss_pred cCCCeEEecCCCCCCCC------CCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCC-CCcccCCHHHHHHHH
Q psy13372 100 LNIPAIHIMSGKTESSR------TQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSV-PGYYLSSFRVAERLI 172 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~------~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~-~~~~~~~~~~~~~li 172 (273)
++...+.=|.+....+. +.| .+++..+.++++++++-+.. |.++++||.+.+.. + ..+..+ .+++
T Consensus 87 ~~~~~~SeHL~~~~~~~~l~dLLPlP-~T~eal~~v~~rI~~vQd~L---grplllEN~s~Y~~~~---~~~m~E-~eFl 158 (307)
T 3bww_A 87 YNTPFFSDHLSFCECDGHLYDLLPMP-FTDEAVKHTAARIREVQDFL---EIQISVENTSYYLHSE---TSTMNE-VEFL 158 (307)
T ss_dssp TTCCCCEECSCC---------CCCBC-CCHHHHHHHHHHHHHHHHHH---TSCCEEECCCCSCBCT---TCSSCH-HHHH
T ss_pred HCCCEEEeeeeeecCCCccCcCCCCC-CCHHHHHHHHHHHHHHHHHH---CCCEEEeccccccCCC---CCCCCH-HHHH
Confidence 99998877765442210 113 37888888888888877765 57999999775521 1 222323 3344
Q ss_pred HH-HhhcCCCceeEeeecccccc----cC-CChHHHHHhcC-CcceeEEeccC
Q psy13372 173 RE-LRAHGISNVQLQFDFFNAQR----IC-GDLTHTFGACR-DLIGHVQIAQA 218 (273)
Q Consensus 173 ~~-~~~~~~~~~g~~~D~~h~~~----~~-~~~~~~i~~~~-~~i~~vHi~d~ 218 (273)
.+ +++. ++|+++|+.|.+. .| -|+.+++..+. ++|.++|++..
T Consensus 159 ~el~~rt---gCgLLLDVnNvyVna~Nhg~~Dp~~~L~~lP~erV~eiHlAGh 208 (307)
T 3bww_A 159 NAIVQEA---NCGIHLDVNNIYVNAVNHGLLDPHVFIDNVDLKRVNYIHIAGH 208 (307)
T ss_dssp HHHHHHH---TCEEEEEHHHHHHHHHHHCCSCHHHHHHHSCGGGEEEEEECC-
T ss_pred HHHHHHh---CCCEEEEecceEEeeecCCCCCHHHHHHhCCHHHhEEEeccCC
Confidence 22 1554 5999999999853 46 79999999984 79999999964
No 44
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.60 E-value=0.0059 Score=51.84 Aligned_cols=200 Identities=17% Similarity=0.107 Sum_probs=115.8
Q ss_pred CHHHH---HHHHHHcCCCeEEecCCCC-C-----CCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 22 NYLDK---YRVAAELGFRYIESWFPPV-G-----VTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 22 ~~~~~---l~~~~~~G~~~vEl~~~~~-~-----~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
+.++. ++.+.++|++.||++++.. . .+..++.+.+.+. ++.+..+. ++ .
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~----------~n-----------~ 82 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV----------PN-----------M 82 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC----------SS-----------H
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe----------CC-----------H
Confidence 44554 6667788999999987521 1 1333443333333 56665432 11 1
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
+-++.|...|++.|.+....-...... ......+..++.+++++++|+++|+.+..+-..-+..++..-.+++.+.++
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~--~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~ 160 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKA--NINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASV 160 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHH--HTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHH--HcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHH
Confidence 234556668999988853211000000 012346678888899999999999987644311000022245689999999
Q ss_pred HHHHhhcCCCceeEeeecccccccCCChHHHHHhc---CC-cceeEEeccCCCC-------------------------C
Q psy13372 172 IRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC---RD-LIGHVQIAQAPDR-------------------------Q 222 (273)
Q Consensus 172 i~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~---~~-~i~~vHi~d~~~~-------------------------~ 222 (273)
++.+.+.+-..+.++ |+.-.... ....+.++.+ .+ --..+|.+|..+. +
T Consensus 161 ~~~~~~~G~d~i~l~-Dt~G~~~P-~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~sv~GlG~c 238 (295)
T 1ydn_A 161 TEQLFSLGCHEVSLG-DTIGRGTP-DTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASVGGLGGC 238 (295)
T ss_dssp HHHHHHHTCSEEEEE-ETTSCCCH-HHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEEBTTCCSCB
T ss_pred HHHHHhcCCCEEEec-CCCCCcCH-HHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEeccccCCCC
Confidence 955557876667777 75333211 1233334433 33 2356888775321 1
Q ss_pred --CCCCCCcccHHHHHHHHHHcCCCc
Q psy13372 223 --EPHARGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 223 --~~g~~G~id~~~i~~~L~~~gy~g 246 (273)
.||..|.++...++..|+..||+.
T Consensus 239 p~a~g~~GN~~~e~lv~~l~~~g~~~ 264 (295)
T 1ydn_A 239 PFAPGAKGNVDTVAVVEMLHEMGFET 264 (295)
T ss_dssp TTBTTSCCBCBHHHHHHHHHHTTCBC
T ss_pred CCCCCCcCChhHHHHHHHHHhcCCCC
Confidence 234249999999999999988763
No 45
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.53 E-value=0.013 Score=49.82 Aligned_cols=196 Identities=15% Similarity=0.069 Sum_probs=116.4
Q ss_pred HHHHHHHHHcCCCeEEecCCC-CC-----CCHHHHHHHHH-HcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPP-VG-----VTLEQLVAAQT-RHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~-~~-----~~~~~~~~~l~-~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
.+.++.+.++|++.||..++. .. .+..++.+.+. ..+..+..+. ++ . +-++.
T Consensus 33 ~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~----------~~-------~----~~i~~ 91 (302)
T 2ftp_A 33 IRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA----------PN-------L----KGFEA 91 (302)
T ss_dssp HHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC----------CS-------H----HHHHH
T ss_pred HHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe----------CC-------H----HHHHH
Confidence 344557788899999998631 10 23333333332 2344444321 11 1 23445
Q ss_pred HHHcCCCeEEecCCCCCCC--CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHH
Q psy13372 97 ACALNIPAIHIMSGKTESS--RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRE 174 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~ 174 (273)
|...|++.|.+..+.-... .. .....++.++.+++++++|+++|+.+..|-..-+..+..--.+++.+.++++.
T Consensus 92 a~~aG~~~v~i~~~~s~~~~~~~----~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~ 167 (302)
T 2ftp_A 92 ALESGVKEVAVFAAASEAFSQRN----INCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARE 167 (302)
T ss_dssp HHHTTCCEEEEEEESCHHHHHHH----HSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHH
T ss_pred HHhCCcCEEEEEEecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHH
Confidence 5557999998754321100 00 11346788888999999999999887654321110122224688999999966
Q ss_pred HhhcCCCceeEeeecccccccCCChHHHHHhcCCc----ceeEEeccCCCC-----------------------C----C
Q psy13372 175 LRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDL----IGHVQIAQAPDR-----------------------Q----E 223 (273)
Q Consensus 175 ~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~----i~~vHi~d~~~~-----------------------~----~ 223 (273)
+.+.+-..+.++ |+.-.... ....+.++.+... -..+|.+|..+. + .
T Consensus 168 ~~~~G~d~i~l~-DT~G~~~P-~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a 245 (302)
T 2ftp_A 168 LQQMGCYEVSLG-DTIGVGTA-GATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYA 245 (302)
T ss_dssp HHHTTCSEEEEE-ESSSCCCH-HHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGG
T ss_pred HHHcCCCEEEEe-CCCCCcCH-HHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCCCC
Confidence 668887778888 87544221 1234445555433 357898875321 1 2
Q ss_pred CCCCCcccHHHHHHHHHHcCCCc
Q psy13372 224 PHARGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 224 ~g~~G~id~~~i~~~L~~~gy~g 246 (273)
||..|..+...++..|+..||+.
T Consensus 246 ~gr~GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 246 KGATGNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp TTCBCBCBHHHHHHHHHHTTCBC
T ss_pred CCCCCChhHHHHHHHHHhcCCCC
Confidence 44349999999999999988763
No 46
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.50 E-value=0.0033 Score=53.47 Aligned_cols=199 Identities=12% Similarity=0.034 Sum_probs=114.6
Q ss_pred CHHHH---HHHHHHcCCCeEEecCCC-C---C--CCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 22 NYLDK---YRVAAELGFRYIESWFPP-V---G--VTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 22 ~~~~~---l~~~~~~G~~~vEl~~~~-~---~--~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
+.++. ++.+.++|++.||++++- . . .+..++.+.+++. +..+..+. ++ .
T Consensus 25 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~----------~~-----------~ 83 (298)
T 2cw6_A 25 STPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT----------PN-----------L 83 (298)
T ss_dssp CHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC----------CS-----------H
T ss_pred CHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc----------CC-----------H
Confidence 45555 556678899999998631 1 0 2444454444443 34333221 11 1
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
+-++.|.+.|++.|++............ .....++..+.+.+.+++|+++|+.+.......+..+...-.+++.+.++
T Consensus 84 ~~i~~a~~ag~~~v~i~~~~sd~~~~~~--~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~ 161 (298)
T 2cw6_A 84 KGFEAAVAAGAKEVVIFGAASELFTKKN--INCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEV 161 (298)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHH--HSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHH
T ss_pred HhHHHHHHCCCCEEEEEecCCHHHHHHH--hCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHH
Confidence 2356667789999988542211000000 12246677888889999999999877544321110122224578888888
Q ss_pred HHHHhhcCCCceeEeeecccccccCCChHHHHHhc---CC-cceeEEeccCCCC-----------------------C--
Q psy13372 172 IRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC---RD-LIGHVQIAQAPDR-----------------------Q-- 222 (273)
Q Consensus 172 i~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~---~~-~i~~vHi~d~~~~-----------------------~-- 222 (273)
++.+.+.+-..+.++ |+.-.... ..+.+.++.+ .+ -...+|.+|..+. +
T Consensus 162 ~~~~~~~Ga~~i~l~-DT~G~~~P-~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~c 239 (298)
T 2cw6_A 162 TKKFYSMGCYEISLG-DTIGVGTP-GIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGC 239 (298)
T ss_dssp HHHHHHTTCSEEEEE-ETTSCCCH-HHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCC
T ss_pred HHHHHHcCCCEEEec-CCCCCcCH-HHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCC
Confidence 877777776666665 76433221 1223333333 32 3467898885321 1
Q ss_pred --CCCCCCcccHHHHHHHHHHcCCC
Q psy13372 223 --EPHARGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 223 --~~g~~G~id~~~i~~~L~~~gy~ 245 (273)
.||..|.++...+...|+..||+
T Consensus 240 p~a~g~aGN~~~E~lv~~l~~~g~~ 264 (298)
T 2cw6_A 240 PYAQGASGNLATEDLVYMLEGLGIH 264 (298)
T ss_dssp TTSCSSCCBCBHHHHHHHHHHHTCB
T ss_pred CCCCCCcCChhHHHHHHHHHhcCCC
Confidence 24423999999999999998876
No 47
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.28 E-value=0.0086 Score=50.77 Aligned_cols=195 Identities=12% Similarity=0.028 Sum_probs=112.1
Q ss_pred CHHHHH---HHHHHcCCCeEEecCCC-CCCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKY---RVAAELGFRYIESWFPP-VGVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l---~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
+.++.+ +.+.++|++.||+++|. .+.+.+.++++.+. .+.++..+.. .. .+.++++++.
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~---------~~-------~~di~~a~~~ 88 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLAR---------CV-------EGDIDRAEEA 88 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEE---------SS-------HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEec---------CC-------HHHHHHHHHH
Confidence 455554 45577899999999873 21234555555443 2344444321 01 1235667776
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
....|++.|.++...-..... .......++..+.+.+++++|+++|..+.+=+. ...-.+++.+.++++.+.
T Consensus 89 ~~~ag~~~v~i~~~~Sd~~~~--~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~------d~~~~~~~~~~~~~~~~~ 160 (293)
T 3ewb_X 89 LKDAVSPQIHIFLATSDVHME--YKLKMSRAEVLASIKHHISYARQKFDVVQFSPE------DATRSDRAFLIEAVQTAI 160 (293)
T ss_dssp HTTCSSEEEEEEEECSHHHHH--HTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE------TGGGSCHHHHHHHHHHHH
T ss_pred HhhcCCCEEEEEecCcHHHHH--HHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec------cCCCCCHHHHHHHHHHHH
Confidence 666888888775422110000 002345778888899999999999976544321 123467788888886667
Q ss_pred hcCCCceeEeeecccccccCC--ChHHHHHhcCCc----ceeEEeccCCCC--------------------CCCC-CCCc
Q psy13372 177 AHGISNVQLQFDFFNAQRICG--DLTHTFGACRDL----IGHVQIAQAPDR--------------------QEPH-ARGE 229 (273)
Q Consensus 177 ~~~~~~~g~~~D~~h~~~~~~--~~~~~i~~~~~~----i~~vHi~d~~~~--------------------~~~g-~~G~ 229 (273)
+.+-..+.+ -|+.-...... ++...+++..+. ...+|.+|..+. ...| ..|.
T Consensus 161 ~~G~~~i~l-~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlGeraGN 239 (293)
T 3ewb_X 161 DAGATVINI-PDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIGERAGN 239 (293)
T ss_dssp HTTCCEEEE-ECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCTTTCB
T ss_pred HcCCCEEEe-cCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecccccccccc
Confidence 776444433 36543322211 122333333332 368999986432 0122 1399
Q ss_pred ccHHHHHHHHHH
Q psy13372 230 IDYAYVFELLAR 241 (273)
Q Consensus 230 id~~~i~~~L~~ 241 (273)
++...++..|..
T Consensus 240 ~~~E~vv~~L~~ 251 (293)
T 3ewb_X 240 TALEEVAVALHI 251 (293)
T ss_dssp CBHHHHHHHHHH
T ss_pred HhHHHHHHHHHh
Confidence 999999999985
No 48
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.28 E-value=0.016 Score=49.43 Aligned_cols=198 Identities=14% Similarity=0.084 Sum_probs=115.6
Q ss_pred CHHHHH---HHHHHcCCCeEEecCCCC------CCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 22 NYLDKY---RVAAELGFRYIESWFPPV------GVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 22 ~~~~~l---~~~~~~G~~~vEl~~~~~------~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
+.++.+ +.+.++|++.||++++-. -.+.+++.+.+.+ .+..+..+. ++ .+
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~----------~~-------~~--- 85 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV----------PN-------QR--- 85 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC----------CS-------HH---
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe----------CC-------HH---
Confidence 555554 466778999999986411 0234444443332 234443321 11 11
Q ss_pred HHHHHHHHcCCCeEEecCCCCCC--CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTES--SRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
-++.|.+.|++.|++....-.. ... .....++..+.+.+.+++|+++|+.+...-...+..+..--.+++.+.
T Consensus 86 -~i~~a~~~g~~~v~i~~~~sd~~~~~~----l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~ 160 (307)
T 1ydo_A 86 -GLENALEGGINEACVFMSASETHNRKN----INKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVI 160 (307)
T ss_dssp -HHHHHHHHTCSEEEEEEESSHHHHHTT----TCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHH
T ss_pred -hHHHHHhCCcCEEEEEeecCHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHH
Confidence 2455556799999886422110 000 334577888889999999999998764322111101222246788889
Q ss_pred HHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCC----cceeEEeccCCCC-----------------------C
Q psy13372 170 RLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRD----LIGHVQIAQAPDR-----------------------Q 222 (273)
Q Consensus 170 ~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~----~i~~vHi~d~~~~-----------------------~ 222 (273)
++++.+.+.+-..+.++ |+.-.... ..+.+.++.+.. -...+|.+|..|. +
T Consensus 161 ~~~~~~~~~Ga~~i~l~-DT~G~~~P-~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlG 238 (307)
T 1ydo_A 161 RLSEALFEFGISELSLG-DTIGAANP-AQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLG 238 (307)
T ss_dssp HHHHHHHHHTCSCEEEE-CSSCCCCH-HHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCC
T ss_pred HHHHHHHhcCCCEEEEc-CCCCCcCH-HHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccC
Confidence 99977777776667776 77443222 123344444432 3468899885321 1
Q ss_pred ----CCCCCCcccHHHHHHHHHHcCCCc
Q psy13372 223 ----EPHARGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 223 ----~~g~~G~id~~~i~~~L~~~gy~g 246 (273)
.||..|..+...++..|+..||+.
T Consensus 239 ecp~a~graGN~~~E~lv~~L~~~g~~t 266 (307)
T 1ydo_A 239 GCPYAPGSSGNAATEDIVYMLEQMDIKT 266 (307)
T ss_dssp EETTEEEEECBCBHHHHHHHHHHTTCBC
T ss_pred CCCCCCCCCCChhHHHHHHHHHhcCCCC
Confidence 123239999999999999988863
No 49
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.23 E-value=0.038 Score=49.81 Aligned_cols=193 Identities=12% Similarity=0.156 Sum_probs=114.5
Q ss_pred HHHHHHHHHHcCCCeEEecCCC---------CCCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPP---------VGVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~---------~~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
..+.++.+.++|++.||.+++. .+.+.+.++++.+. .+..+.++.-- ....|....++ +-.+.
T Consensus 32 kl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~l~~i~~~~~~~~l~~l~R~-~N~~G~~~~~d------dv~~~ 104 (464)
T 2nx9_A 32 MLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRG-QNLLGYRHYAD------DVVDT 104 (464)
T ss_dssp TGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHHHHHHHHHCSSSCEEEEECG-GGTTSSSCCCH------HHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHHHHHHHHhCCCCeEEEEecc-ccccCcccccc------hhhHH
Confidence 3455667788899999999752 22233444444332 35666655310 01123322222 12456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE--EEccCCCCCCCCcccCCHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA--LIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i--~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
.++.+...|++.+++.... ++ . +.++..+++|+++|..+ .+-.. .....+++.+.+
T Consensus 105 ~v~~a~~~Gvd~i~if~~~--sd------~--------~ni~~~i~~ak~~G~~v~~~i~~~------~~~~~~~e~~~~ 162 (464)
T 2nx9_A 105 FVERAVKNGMDVFRVFDAM--ND------V--------RNMQQALQAVKKMGAHAQGTLCYT------TSPVHNLQTWVD 162 (464)
T ss_dssp HHHHHHHTTCCEEEECCTT--CC------T--------HHHHHHHHHHHHTTCEEEEEEECC------CCTTCCHHHHHH
T ss_pred HHHHHHhCCcCEEEEEEec--CH------H--------HHHHHHHHHHHHCCCEEEEEEEee------eCCCCCHHHHHH
Confidence 7788888999999986321 11 1 34677888999999765 34211 123458888999
Q ss_pred HHHHHhhcCCCceeEeeecccccccCC--ChHHHHHhcCCcceeEEeccCCCC----------------------CCCCC
Q psy13372 171 LIRELRAHGISNVQLQFDFFNAQRICG--DLTHTFGACRDLIGHVQIAQAPDR----------------------QEPHA 226 (273)
Q Consensus 171 li~~~~~~~~~~~g~~~D~~h~~~~~~--~~~~~i~~~~~~i~~vHi~d~~~~----------------------~~~g~ 226 (273)
+++++.+.+...+.++ |+.-...... .+...+++..+-..++|.+|+.|. -..+.
T Consensus 163 ~a~~l~~~Gad~I~l~-DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~gert 241 (464)
T 2nx9_A 163 VAQQLAELGVDSIALK-DMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMSGTY 241 (464)
T ss_dssp HHHHHHHTTCSEEEEE-ETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGCSTT
T ss_pred HHHHHHHCCCCEEEEc-CCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccCCCC
Confidence 9977777775544443 5533322111 122333332345578999986432 02466
Q ss_pred CCcccHHHHHHHHHHcCCCc
Q psy13372 227 RGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 227 ~G~id~~~i~~~L~~~gy~g 246 (273)
|..+...++..|+..||+.
T Consensus 242 -GN~~lE~lv~~L~~~g~~t 260 (464)
T 2nx9_A 242 -GHPATESLVATLQGTGYDT 260 (464)
T ss_dssp -SCCBHHHHHHHHTTSTTCC
T ss_pred -cCHHHHHHHHHHHhcCCCc
Confidence 9999999999999988863
No 50
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=97.02 E-value=0.0049 Score=49.93 Aligned_cols=52 Identities=15% Similarity=0.158 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..|+.|+++|+++|-+|+|...... .+...+.-.+.+.+.+.+|.+.|+.+.
T Consensus 139 ~qi~aA~~~GA~~IELhTG~Ya~a~-----~~~~~~~el~~i~~aa~~A~~lGL~Vn 190 (243)
T 1m5w_A 139 EQIKAAAEVGAPFIEIHTGCYADAK-----TDAEQAQELARIAKAATFAASLGLKVN 190 (243)
T ss_dssp HHHHHHHHTTCSEEEEECHHHHHCC-----SHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhCcCEEEEechhhhcCC-----CchhHHHHHHHHHHHHHHHHHcCCEEe
Confidence 3688999999999999998764331 222334567888999999999998875
No 51
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.91 E-value=0.078 Score=48.61 Aligned_cols=193 Identities=12% Similarity=0.130 Sum_probs=113.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC---------CCCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP---------VGVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~---------~~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
+..+.++.+.++|++.||.+++. .+.+.+.++.+.+. -+..+.++.- .....|....++ +-.+
T Consensus 48 dKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~lr~l~~~~~~~~l~~L~R-~~N~~G~~~ypd------dv~~ 120 (539)
T 1rqb_A 48 DMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWERLRTFRKLMPNSRLQMLLR-GQNLLGYRHYND------EVVD 120 (539)
T ss_dssp GTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCTTSCEEEEEC-GGGTTSSSCCCH------HHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHHHHHHHHhCCCCEEEEEec-cccccCcccCcc------cccH
Confidence 34555677788899999999752 21223344443332 3566666541 001123322222 1245
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE--EEccCCCCCCCCcccCCHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA--LIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i--~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
+.++.+...|+..+++.... ++ . +.+...+++++++|..+ .+=.. .....+++.++
T Consensus 121 ~~ve~a~~aGvd~vrIf~s~--sd------~--------~ni~~~i~~ak~~G~~v~~~i~~~------~~~~~~~e~~~ 178 (539)
T 1rqb_A 121 RFVDKSAENGMDVFRVFDAM--ND------P--------RNMAHAMAAVKKAGKHAQGTICYT------ISPVHTVEGYV 178 (539)
T ss_dssp HHHHHHHHTTCCEEEECCTT--CC------T--------HHHHHHHHHHHHTTCEEEEEEECC------CSTTCCHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEeh--hH------H--------HHHHHHHHHHHHCCCeEEEEEEee------eCCCCCHHHHH
Confidence 67777888999999986321 11 1 44678889999999765 44211 12345888899
Q ss_pred HHHHHHhhcCCCceeEeeecccccccCC--ChHHHHHh-cC-CcceeEEeccCCCC----------------------CC
Q psy13372 170 RLIRELRAHGISNVQLQFDFFNAQRICG--DLTHTFGA-CR-DLIGHVQIAQAPDR----------------------QE 223 (273)
Q Consensus 170 ~li~~~~~~~~~~~g~~~D~~h~~~~~~--~~~~~i~~-~~-~~i~~vHi~d~~~~----------------------~~ 223 (273)
++++++.+.+...+.+ -|+.-...... ++...+++ +. +-..++|.+|..|. -.
T Consensus 179 ~~a~~l~~~Gad~I~L-~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~G 257 (539)
T 1rqb_A 179 KLAGQLLDMGADSIAL-KDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMS 257 (539)
T ss_dssp HHHHHHHHTTCSEEEE-EETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGC
T ss_pred HHHHHHHHcCCCEEEe-CCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC
Confidence 9997777776443443 35543322111 12233333 22 44578999986432 02
Q ss_pred CCCCCcccHHHHHHHHHHcCCC
Q psy13372 224 PHARGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 224 ~g~~G~id~~~i~~~L~~~gy~ 245 (273)
.++ |..+...++..|...||+
T Consensus 258 ert-GN~~lE~lv~~L~~~g~~ 278 (539)
T 1rqb_A 258 LGP-GHNPTESVAEMLEGTGYT 278 (539)
T ss_dssp STT-SBCBHHHHHHHTTTSSEE
T ss_pred CCc-cChhHHHHHHHHHhcCCC
Confidence 456 999999999999987764
No 52
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=96.91 E-value=0.012 Score=50.55 Aligned_cols=192 Identities=13% Similarity=0.033 Sum_probs=107.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.-.+.++.+.++|++.||+++|. .+.+.+.++++.+. .+.++..+.. .. .+.++++++....
T Consensus 29 ~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r---------~~-------~~~i~~a~~al~~ 92 (325)
T 3eeg_A 29 EKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKAVTRPTICALTR---------AK-------EADINIAGEALRF 92 (325)
T ss_dssp HHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHHCCSSEEEEECC---------SC-------HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHhCCCCEEEEeec---------CC-------HHHHHHHHHhhcc
Confidence 34555666778899999999874 22234455555443 2344444321 11 1234455555555
Q ss_pred cCCCeEEecCCCCCC--CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhh
Q psy13372 100 LNIPAIHIMSGKTES--SRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRA 177 (273)
Q Consensus 100 lG~~~i~~~~G~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~ 177 (273)
.|++.|.++...-.. ... .....++..+.+.+.+++|+++|+.+.+-+ +...-.+++.+.++++.+.+
T Consensus 93 ag~~~v~i~~s~Sd~~~~~~----l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~------~d~~~~~~~~~~~~~~~~~~ 162 (325)
T 3eeg_A 93 AKRSRIHTGIGSSDIHIEHK----LRSTRENILEMAVAAVKQAKKVVHEVEFFC------EDAGRADQAFLARMVEAVIE 162 (325)
T ss_dssp CSSEEEEEEEECSHHHHC--------CCCTTGGGTTHHHHHHHHTTSSEEEEEE------ETGGGSCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEecccHHHHHHH----hCCCHHHHHHHHHHHHHHHHHCCCEEEEEc------cccccchHHHHHHHHHHHHh
Confidence 688888775322110 000 112233445566778889999998876644 22345678888899866666
Q ss_pred cCCCceeEeeecccccccC--CChHHHHHhcCC----cceeEEeccCCCC--------------------CCC--CCCCc
Q psy13372 178 HGISNVQLQFDFFNAQRIC--GDLTHTFGACRD----LIGHVQIAQAPDR--------------------QEP--HARGE 229 (273)
Q Consensus 178 ~~~~~~g~~~D~~h~~~~~--~~~~~~i~~~~~----~i~~vHi~d~~~~--------------------~~~--g~~G~ 229 (273)
.+-..+.+ -|+.-..... .++...+++..+ -...+|.+|..+. ... +. |.
T Consensus 163 ~G~~~i~l-~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlGer~-GN 240 (325)
T 3eeg_A 163 AGADVVNI-PDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIGERA-GN 240 (325)
T ss_dssp HTCSEEEC-CBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCCSTT-CC
T ss_pred cCCCEEEe-cCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEecccccccc-cc
Confidence 66443333 3553332211 122233333333 4568899986432 012 34 99
Q ss_pred ccHHHHHHHHHH
Q psy13372 230 IDYAYVFELLAR 241 (273)
Q Consensus 230 id~~~i~~~L~~ 241 (273)
.+...++..|+.
T Consensus 241 ~~lE~vv~~L~~ 252 (325)
T 3eeg_A 241 TALEEVVMAMEC 252 (325)
T ss_dssp CBHHHHHHHHHH
T ss_pred hhHHHHHHHHHh
Confidence 999999999985
No 53
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=96.87 E-value=0.023 Score=46.75 Aligned_cols=141 Identities=11% Similarity=0.055 Sum_probs=80.0
Q ss_pred CCccccccccccccc------ccccCHHHHHHHHHHcCCCeEEecCCCC-----CCCH------------------HHHH
Q psy13372 3 APSFKLAANLTLLFN------DLAANYLDKYRVAAELGFRYIESWFPPV-----GVTL------------------EQLV 53 (273)
Q Consensus 3 ~~~~k~~~~~~~~~~------~~~~~~~~~l~~~~~~G~~~vEl~~~~~-----~~~~------------------~~~~ 53 (273)
..|+|||||..-+.. ...+++.++...+.+.|.|+|.+....| +.++ +++.
T Consensus 29 ~~m~~LgVNIDhVAtLRnARg~~~PDpv~aA~~ae~aGAdGITvHlReDrRHI~d~Dv~~L~~~i~t~lNlEma~t~emi 108 (278)
T 3gk0_A 29 PAAIDLGVNIDHVATLRNARGTAYPDPVRAALAAEDAGADAITLHLREDRRHIVDADVRTLRPRVKTRMNLECAVTPEML 108 (278)
T ss_dssp GGGSEEEEECHHHHHHHHHHSSSCSCHHHHHHHHHHTTCSEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSSHHHH
T ss_pred ccccEEEechHhhhhhhccCCCCCCCHHHHHHHHHHcCCCEEEeccCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHH
Confidence 357899999743332 1236889999999999999999985321 0111 2222
Q ss_pred HHHHHcCCeeEEEecCCc----cccCC--CCCchhHHHHHHHHH--------------HHHHHHHHcCCCeEEecCCCCC
Q psy13372 54 AAQTRHGLKQVLINTEVD----ENFGY--AAVKGKESEFRASLE--------------KTIQYACALNIPAIHIMSGKTE 113 (273)
Q Consensus 54 ~~l~~~gL~i~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~--------------~~i~~a~~lG~~~i~~~~G~~~ 113 (273)
++..+..=.-+++..... .+-|+ ..+.+.....++.++ ..|+.|+++|+++|-+++|...
T Consensus 109 ~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IELhTG~YA 188 (278)
T 3gk0_A 109 DIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIELHTGRYA 188 (278)
T ss_dssp HHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEECCHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEEecchhh
Confidence 222222211122111000 00011 111222223333332 3688999999999999998764
Q ss_pred CCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 114 SSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
... .....+.-.+.+.+.+.+|.+.|+.+.
T Consensus 189 ~a~-----~~~~~~~el~rl~~aA~~A~~lGL~Vn 218 (278)
T 3gk0_A 189 DAH-----DAAEQQREFERIATGVDAGIALGLKVN 218 (278)
T ss_dssp TCS-----SHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccC-----CchhHHHHHHHHHHHHHHHHHcCCEEe
Confidence 321 223455667888999999999998875
No 54
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=96.78 E-value=0.039 Score=48.31 Aligned_cols=195 Identities=10% Similarity=0.027 Sum_probs=113.0
Q ss_pred CHHHHHH---HHHHcCCCeEEecCCC-CCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYR---VAAELGFRYIESWFPP-VGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l~---~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
+.++.++ .+.++|++.||.++|. .+.+.+.++++.+.. +..+.++.. .. .+.++++++.
T Consensus 32 ~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r---------~~-------~~di~~a~~a 95 (370)
T 3rmj_A 32 TKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSR---------AI-------ERDIRQAGEA 95 (370)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEEEE---------SS-------HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEEec---------CC-------HHHHHHHHHH
Confidence 5566555 5567899999999873 223445666554431 233333321 11 2345666666
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
....|++.|.++...-..... .......++..+.+.+.+++|+++|..+.+-+ ++..-.+++.+.++++.+.
T Consensus 96 l~~ag~~~v~if~~~Sd~h~~--~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~------ed~~r~~~~~~~~~~~~~~ 167 (370)
T 3rmj_A 96 VAPAPKKRIHTFIATSPIHME--YKLKMKPKQVIEAAVKAVKIAREYTDDVEFSC------EDALRSEIDFLAEICGAVI 167 (370)
T ss_dssp HTTSSSEEEEEEEECSHHHHH--HTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEE------ETGGGSCHHHHHHHHHHHH
T ss_pred HhhCCCCEEEEEecCcHHHHH--HHhCCCHHHHHHHHHHHHHHHHHcCCEEEEec------CCCCccCHHHHHHHHHHHH
Confidence 666888888775432110000 00234567788888899999999997655443 2234567888888886667
Q ss_pred hcCCCceeEeeecccccccCC--ChHHHHHhcCC----cceeEEeccCCCC--------------------CCCC-CCCc
Q psy13372 177 AHGISNVQLQFDFFNAQRICG--DLTHTFGACRD----LIGHVQIAQAPDR--------------------QEPH-ARGE 229 (273)
Q Consensus 177 ~~~~~~~g~~~D~~h~~~~~~--~~~~~i~~~~~----~i~~vHi~d~~~~--------------------~~~g-~~G~ 229 (273)
+.+...+.++ ||.-...... ++...+++..+ -...+|.+|..+. ...| ..|.
T Consensus 168 ~~Ga~~i~l~-DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN 246 (370)
T 3rmj_A 168 EAGATTINIP-DTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGN 246 (370)
T ss_dssp HHTCCEEEEE-CSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCB
T ss_pred HcCCCEEEec-CccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccCccccc
Confidence 7775544443 5533322111 22233333333 3468999986432 0122 1399
Q ss_pred ccHHHHHHHHHH
Q psy13372 230 IDYAYVFELLAR 241 (273)
Q Consensus 230 id~~~i~~~L~~ 241 (273)
.+...++-.|+.
T Consensus 247 ~~lE~vv~~L~~ 258 (370)
T 3rmj_A 247 ASVEEIVMALKV 258 (370)
T ss_dssp CBHHHHHHHHHH
T ss_pred ccHHHHHHHHHh
Confidence 999999999975
No 55
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=96.72 E-value=0.048 Score=47.11 Aligned_cols=198 Identities=9% Similarity=0.023 Sum_probs=109.2
Q ss_pred CHHHHHH----HHHHcCCCeEEecCCCC-CCCHHHHHHHHHHc----CCeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYR----VAAELGFRYIESWFPPV-GVTLEQLVAAQTRH----GLKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~----~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~----gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
+.++.++ .+.++|++.||++++-. +.+.+.++++.+.. .+.-+.+... ... .+
T Consensus 39 ~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l-------~~~--~~--------- 100 (337)
T 3ble_A 39 STSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGF-------VDG--NK--------- 100 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEE-------SST--TH---------
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEE-------ccc--hh---------
Confidence 5566555 55578999999998742 23334444443320 2322222211 111 11
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
-++.|.+.|++.|++............ .....++..+.+.+++++|+++|+.+.+-... + ++..-.+++.+.+++
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~--~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~-~--~~~~~~~~~~~~~~~ 175 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQ--LGKTPKEFFTDVSFVIEYAIKSGLKINVYLED-W--SNGFRNSPDYVKSLV 175 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHH--TCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET-H--HHHHHHCHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHH--hCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE-C--CCCCcCCHHHHHHHH
Confidence 466667789999888542110000000 12245677888999999999999765433211 0 112345677788888
Q ss_pred HHHhhcCCCceeEeeecccccccCCChHHHHHhc---C-CcceeEEeccCCCC--------------------CCC--CC
Q psy13372 173 RELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC---R-DLIGHVQIAQAPDR--------------------QEP--HA 226 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~---~-~~i~~vHi~d~~~~--------------------~~~--g~ 226 (273)
+++.+.+-..+. .-|+.-.... ..+.+.++.+ . +-...+|.+|+.+. ... +.
T Consensus 176 ~~~~~~Ga~~i~-l~DT~G~~~P-~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~a 253 (337)
T 3ble_A 176 EHLSKEHIERIF-LPDTLGVLSP-EETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERA 253 (337)
T ss_dssp HHHHTSCCSEEE-EECTTCCCCH-HHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTT
T ss_pred HHHHHcCCCEEE-EecCCCCcCH-HHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccccc
Confidence 666666643333 3465333221 1223333333 2 34568999986432 012 34
Q ss_pred CCcccHHHHHHHHHHc-CCC
Q psy13372 227 RGEIDYAYVFELLARE-GYE 245 (273)
Q Consensus 227 ~G~id~~~i~~~L~~~-gy~ 245 (273)
|..+...++..|+.. |++
T Consensus 254 -GN~~~E~lv~~L~~~~g~~ 272 (337)
T 3ble_A 254 -GNTPLEALVTTIHDKSNSK 272 (337)
T ss_dssp -CBCBHHHHHHHHHHHSSCC
T ss_pred -cchhHHHHHHHHHHhcCCC
Confidence 999999999999988 765
No 56
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=96.62 E-value=0.12 Score=45.98 Aligned_cols=190 Identities=11% Similarity=0.089 Sum_probs=105.7
Q ss_pred CHHHHHH---HHHHcCCCeEEecCCCCCCCHH--HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYR---VAAELGFRYIESWFPPVGVTLE--QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l~---~~~~~G~~~vEl~~~~~~~~~~--~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
+.++.++ .+.++|++.||+.+|.. .++ +..+.+.+.++....+. +. . ++. +. ++.
T Consensus 59 s~eeKl~Ia~~L~~~Gv~~IEvG~P~a--sp~d~~~~~~i~~~~~~~~v~~-~~-----r-~~~-------~d----i~~ 118 (423)
T 3ivs_A 59 DTEKKIQIAKALDNFGVDYIELTSPVA--SEQSRQDCEAICKLGLKCKILT-HI-----R-CHM-------DD----ARV 118 (423)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCTTS--CHHHHHHHHHHHTSCCSSEEEE-EE-----E-SCH-------HH----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccc--CHHHHHHHHHHHhcCCCCEEEE-ee-----c-cCh-------hh----HHH
Confidence 5566655 55778999999988732 222 23344556676644221 10 0 111 11 345
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
|...|++.|++..+.-..... .......++..+.+.+.+++|+++|+.+.+-.. +.+-.+++.+.++++.+.
T Consensus 119 A~~aG~~~V~i~~s~Sd~~~~--~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e------da~r~d~~~~~~v~~~~~ 190 (423)
T 3ivs_A 119 AVETGVDGVDVVIGTSQYLRK--YSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE------DSFRSDLVDLLSLYKAVD 190 (423)
T ss_dssp HHHTTCSEEEEEEEC---------------CHHHHHHHHHHHHHHTTTCEEEEEEE------SGGGSCHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeeccHHHHH--HHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc------cCcCCCHHHHHHHHHHHH
Confidence 556799998886432111100 002334556777888899999999987666542 235678888888886666
Q ss_pred hcCCCceeEeeecccccccCCChHHHHHhc---CCcceeEEeccCCCC--------------------CCCCC-CCcccH
Q psy13372 177 AHGISNVQLQFDFFNAQRICGDLTHTFGAC---RDLIGHVQIAQAPDR--------------------QEPHA-RGEIDY 232 (273)
Q Consensus 177 ~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~---~~~i~~vHi~d~~~~--------------------~~~g~-~G~id~ 232 (273)
+.+...+. +-|+.-..... .+.+.++.+ .+-...+|.+|..+. ...|. .|..+.
T Consensus 191 ~~Ga~~i~-l~DTvG~~~P~-~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGERaGNa~L 268 (423)
T 3ivs_A 191 KIGVNRVG-IADTVGCATPR-QVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIGERNGITPL 268 (423)
T ss_dssp HHCCSEEE-EEETTSCCCHH-HHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBH
T ss_pred HhCCCccc-cCCccCcCCHH-HHHHHHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEecccccCcccchhH
Confidence 66644443 34654332211 233333333 344568999986432 01232 289999
Q ss_pred HHHHHHHHH
Q psy13372 233 AYVFELLAR 241 (273)
Q Consensus 233 ~~i~~~L~~ 241 (273)
..++..|..
T Consensus 269 e~vv~~L~~ 277 (423)
T 3ivs_A 269 GALLARMYV 277 (423)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999887754
No 57
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=96.51 E-value=0.063 Score=50.09 Aligned_cols=202 Identities=9% Similarity=0.042 Sum_probs=108.4
Q ss_pred CHHHHHH---HHHHcCCCeEEecCCCC-CCCHHHHHHHHHHc----CCeeEEEecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYR---VAAELGFRYIESWFPPV-GVTLEQLVAAQTRH----GLKQVLINTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~---~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~----gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
+.++.++ .+.++|++.||..+|.. ..+.+.++++.+.. +.++..+.. .. ...++++
T Consensus 91 s~eeKl~Ia~~L~~lGVd~IEaGfP~asp~D~e~v~~i~~~~l~~~~~~i~aL~r---------~~-------~~did~a 154 (644)
T 3hq1_A 91 SPARKRRMFDLLVRMGYKEIEVGFPSASQTDFDFVREIIEQGAIPDDVTIQVLTQ---------CR-------PELIERT 154 (644)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTTCHHHHHHHHHHHHTTCSCTTCEEEEEEE---------SC-------HHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhcCCCCCCeEEEEEec---------CC-------HhhHHHH
Confidence 5666655 55777999999998832 23345555555441 445554431 01 1235667
Q ss_pred HHHHHHcCCCeEEecCCCCCCC--CCCCCCCcchHHHHHHHHHHHHHHHhhC---CcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESS--RTQPIASEDPYTTLKENLIYACAELERH---SLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~---gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
++.+...|...|.+....-... .....+.++.++.+.+.++.+.++++++ ++.+-+.+. ...-.+++-+
T Consensus 155 ~eal~~a~~~~Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~E------dasrtd~dfl 228 (644)
T 3hq1_A 155 FQACSGAPRAIVHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPE------SYTGTELEYA 228 (644)
T ss_dssp HHHHTTCSEEEEEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEE------TGGGSCHHHH
T ss_pred HHHHhcCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCc------ccCCCCHHHH
Confidence 7766666666666643211000 0001125667777777777777777764 223333332 2234567777
Q ss_pred HHHHHHHhhcCCC--c---eeEeeecccccccCC--ChHHHHHhcCC----cceeEEeccCCCC----------------
Q psy13372 169 ERLIRELRAHGIS--N---VQLQFDFFNAQRICG--DLTHTFGACRD----LIGHVQIAQAPDR---------------- 221 (273)
Q Consensus 169 ~~li~~~~~~~~~--~---~g~~~D~~h~~~~~~--~~~~~i~~~~~----~i~~vHi~d~~~~---------------- 221 (273)
+++++.+.+++.+ . .--+.|+--...... ++..++.+..+ -...+|.+|..+.
T Consensus 229 ~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~V 308 (644)
T 3hq1_A 229 KQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRI 308 (644)
T ss_dssp HHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEE
Confidence 8888544443222 1 112345433322111 12222333222 3568899985331
Q ss_pred ----CCCCC-CCcccHHHHHHHHHHcCCC
Q psy13372 222 ----QEPHA-RGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 222 ----~~~g~-~G~id~~~i~~~L~~~gy~ 245 (273)
..+|+ .|..+...++-.|...||+
T Consensus 309 dgti~G~GERaGNa~LE~lv~~L~~~Gi~ 337 (644)
T 3hq1_A 309 EGCLFGNGERTGNVCLVTLGLNLFSRGVD 337 (644)
T ss_dssp EEBGGGCSSTTCBCBHHHHHHHHHTTTCC
T ss_pred EecCCCCCccccCccHHHHHHHHHhcccC
Confidence 13453 3999999999999888876
No 58
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.37 E-value=0.34 Score=42.49 Aligned_cols=189 Identities=11% Similarity=0.051 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
.+.++.+.++|++.||+++|.......+..+.+.+.++..... ++ .. ..+ +. ++.|.+.|++
T Consensus 28 ~~ia~~L~~~Gv~~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~-~~---~r---~~~-------~d----i~~a~~~g~~ 89 (382)
T 2ztj_A 28 VEIAKALDEFGIEYIEVTTPVASPQSRKDAEVLASLGLKAKVV-TH---IQ---CRL-------DA----AKVAVETGVQ 89 (382)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHTSCCSSEEE-EE---EE---SCH-------HH----HHHHHHTTCS
T ss_pred HHHHHHHHHcCcCEEEEcCCcCCHHHHHHHHHHHhcCCCcEEE-EE---cc---cCh-------hh----HHHHHHcCCC
Confidence 3345566778999999998732011122334455556653322 21 11 111 11 4556667999
Q ss_pred eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCC
Q psy13372 104 AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS 181 (273)
Q Consensus 104 ~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 181 (273)
.+++....-.... . ......++..+.+.+.+++|+++| +.+.+=... .+-.+++.+.++++++.+. ..
T Consensus 90 ~v~i~~~~s~~~~--~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed------~~~~~~~~~~~~~~~~~~~-a~ 159 (382)
T 2ztj_A 90 GIDLLFGTSKYLR--A-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAED------TFRSEEQDLLAVYEAVAPY-VD 159 (382)
T ss_dssp EEEEEECC-----------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETT------TTTSCHHHHHHHHHHHGGG-CS
T ss_pred EEEEEeccCHHHH--H-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEe------CCCCCHHHHHHHHHHHHHh-cC
Confidence 9887643211100 0 023346677788889999999988 664443321 2456788888888665665 33
Q ss_pred ceeEeeecccccccCC--ChHHHHHhc--CCcceeEEeccCCCC--------------------CCC--CCCCcccHHHH
Q psy13372 182 NVQLQFDFFNAQRICG--DLTHTFGAC--RDLIGHVQIAQAPDR--------------------QEP--HARGEIDYAYV 235 (273)
Q Consensus 182 ~~g~~~D~~h~~~~~~--~~~~~i~~~--~~~i~~vHi~d~~~~--------------------~~~--g~~G~id~~~i 235 (273)
.+ -.-|+.-...... ++...++.. .+-...+|.+|..|. ... +. |..+...+
T Consensus 160 ~i-~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGera-GN~~lE~v 237 (382)
T 2ztj_A 160 RV-GLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERN-GITPLGGF 237 (382)
T ss_dssp EE-EEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTT-CBCBHHHH
T ss_pred EE-EecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccccc-cchhHHHH
Confidence 23 3346533322111 122333332 233468999986432 012 34 99999999
Q ss_pred HHHHHHc
Q psy13372 236 FELLARE 242 (273)
Q Consensus 236 ~~~L~~~ 242 (273)
+..|+..
T Consensus 238 v~~L~~~ 244 (382)
T 2ztj_A 238 LARMYTL 244 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9887644
No 59
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.32 E-value=0.16 Score=43.99 Aligned_cols=183 Identities=10% Similarity=0.018 Sum_probs=103.1
Q ss_pred CHHHH---HHHHHHcCCCeEEec----CCCC-------CCC-HHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHH
Q psy13372 22 NYLDK---YRVAAELGFRYIESW----FPPV-------GVT-LEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESE 85 (273)
Q Consensus 22 ~~~~~---l~~~~~~G~~~vEl~----~~~~-------~~~-~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
+.++. ++.+.++|++.||+. +|.. ..+ .+.++++.+. .+..+..+..+ +.. .
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p-----~~~-~------ 95 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLP-----GIG-S------ 95 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECB-----TTB-C------
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecC-----Ccc-c------
Confidence 55555 556677899999995 3321 123 3444444443 24556555322 111 1
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCH
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSF 165 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~ 165 (273)
.+-++.|.+.|++.++++. +.. .. +...+++++|+++|+.+.+=... ....++
T Consensus 96 -----~~~i~~a~~aGvd~v~I~~---~~s------~~-------~~~~~~i~~ak~~G~~v~~~~~~------a~~~~~ 148 (345)
T 1nvm_A 96 -----VHDLKNAYQAGARVVRVAT---HCT------EA-------DVSKQHIEYARNLGMDTVGFLMM------SHMIPA 148 (345)
T ss_dssp -----HHHHHHHHHHTCCEEEEEE---ETT------CG-------GGGHHHHHHHHHHTCEEEEEEES------TTSSCH
T ss_pred -----HHHHHHHHhCCcCEEEEEE---ecc------HH-------HHHHHHHHHHHHCCCEEEEEEEe------CCCCCH
Confidence 1245556667999998853 111 11 23556677888888654333211 134577
Q ss_pred HHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHH---hcC--CcceeEEeccCCCC-------------------
Q psy13372 166 RVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFG---ACR--DLIGHVQIAQAPDR------------------- 221 (273)
Q Consensus 166 ~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~---~~~--~~i~~vHi~d~~~~------------------- 221 (273)
+.+.++++.+...+-. .=-..|+.-.... ..+.+.++ +.. +-..++|.+|+.+.
T Consensus 149 e~~~~ia~~~~~~Ga~-~i~l~DT~G~~~P-~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~t 226 (345)
T 1nvm_A 149 EKLAEQGKLMESYGAT-CIYMADSGGAMSM-NDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDAS 226 (345)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEECTTCCCCH-HHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEB
T ss_pred HHHHHHHHHHHHCCCC-EEEECCCcCccCH-HHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEec
Confidence 8888888666666533 3334565333221 12333333 333 34578999986432
Q ss_pred -CCC--CCCCcccHHHHHHHHHHcCCCc
Q psy13372 222 -QEP--HARGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 222 -~~~--g~~G~id~~~i~~~L~~~gy~g 246 (273)
... +. |..+...+...|...|++.
T Consensus 227 v~GlG~~a-GN~~le~lv~~L~~~g~~~ 253 (345)
T 1nvm_A 227 LAGMGAGA-GNAPLEVFIAVAERLGWNH 253 (345)
T ss_dssp GGGCSSTT-CBCBHHHHHHHHHHHTCBC
T ss_pred chhccCCc-cCcCHHHHHHHHHhcCCCC
Confidence 012 35 9999999999999988763
No 60
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=96.07 E-value=0.087 Score=43.10 Aligned_cols=140 Identities=11% Similarity=0.013 Sum_probs=81.2
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC---CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP---VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~---~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
..+++.++.|+++||+.||++... +..+..++.+.++++|+++.+=........ .........++..++.
T Consensus 85 g~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~---~~~~~~~~~I~~~~~~---- 157 (251)
T 1qwg_A 85 GKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDK---DKQLTIDDRIKLINFD---- 157 (251)
T ss_dssp TCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHH---HTTCCHHHHHHHHHHH----
T ss_pred CcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcc---cCCCCHHHHHHHHHHH----
Confidence 378999999999999999999542 112345677778899999965221110000 0111222333444444
Q ss_pred HHcCCCeEEecC---CCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 98 CALNIPAIHIMS---GKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLT-ALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 98 ~~lG~~~i~~~~---G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
=..||..|.+-+ |.. +--.. ........+ ..++.+.++. +..|- ++..+-..+|
T Consensus 158 LeAGA~~ViiEarEsG~~iGi~~~----~g~~r~d~v------~~i~~~l~~eklifEA-----------p~k~qq~~fI 216 (251)
T 1qwg_A 158 LDAGADYVIIEGRESGKGKGLFDK----EGKVKENEL------DVLAKNVDINKVIFEA-----------PQKSQQVAFI 216 (251)
T ss_dssp HHHTCSEEEECCTTTCCSSTTBCT----TSCBCHHHH------HHHHTTSCGGGEEEEC-----------CSHHHHHHHH
T ss_pred HHCCCcEEEEeeecccCCcccCCC----CCCCcHHHH------HHHHHhCChhhEEEEC-----------CChHHHHHHH
Confidence 446999999964 211 10000 111122222 2344555664 88884 2466778899
Q ss_pred HHHhhcCCCceeE-eeecccc
Q psy13372 173 RELRAHGISNVQL-QFDFFNA 192 (273)
Q Consensus 173 ~~~~~~~~~~~g~-~~D~~h~ 192 (273)
+.++ |+|.+ ++|..+.
T Consensus 217 ---~~fG-~~VNLgNI~~~eV 233 (251)
T 1qwg_A 217 ---LKFG-SSVNLANIAFDEV 233 (251)
T ss_dssp ---HHHC-TTCCEEEEEGGGH
T ss_pred ---HHhC-CCccccCCCHHHH
Confidence 9987 77888 5777665
No 61
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.03 E-value=0.74 Score=38.54 Aligned_cols=82 Identities=13% Similarity=0.209 Sum_probs=60.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCCHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSSFR 166 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~~~ 166 (273)
.+.++.+++.|+..|..|..+.+.. ...| .+++..+...+.+.+..+.|.+.||. |.+-|. -.|..+.+
T Consensus 123 ~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~-~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg------~gf~k~~~ 195 (282)
T 1aj0_A 123 PGALEAAAETGLPVCLMHMQGNPKTMQEAP-KYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPG------FGFGKNLS 195 (282)
T ss_dssp TTHHHHHHHHTCCEEEECCSSCTTCCSCCC-CCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC------TTSSCCHH
T ss_pred HHHHHHHHHhCCeEEEEccCCCCccccccC-ccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCC------CCcccCHH
Confidence 3578888999999999986332221 1112 25677888899999999999999996 999983 23577899
Q ss_pred HHHHHHHHHhhcC
Q psy13372 167 VAERLIRELRAHG 179 (273)
Q Consensus 167 ~~~~li~~~~~~~ 179 (273)
+.+++++.++.+.
T Consensus 196 ~n~~ll~~l~~~~ 208 (282)
T 1aj0_A 196 HNYSLLARLAEFH 208 (282)
T ss_dssp HHHHHHHTGGGGG
T ss_pred HHHHHHHHHHHHh
Confidence 9999995555553
No 62
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.89 E-value=1 Score=38.17 Aligned_cols=91 Identities=12% Similarity=0.109 Sum_probs=60.6
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCCHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~~~~ 167 (273)
+.++.+++.|++.|..|..+.+.. ...|. + +..+...+.|.+..+.|.++||. |.+-|--. .+.|..+.++
T Consensus 139 ~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~-y-dvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG~G---~~~F~Kt~~~ 213 (314)
T 3tr9_A 139 DALTTVSALKTPVCLMHFPSETRKPGSTTH-F-YFLQSVKKELQESIQRCKKAGISEDRIIIDPGFG---QGNYGKNVSE 213 (314)
T ss_dssp THHHHHHHHTCCEEEECCCCTTCCTTSSCH-H-HHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCC---SGGGCCCHHH
T ss_pred HHHHHHHHhCCeEEEECCCCCCcccccccc-c-chHHHHHHHHHHHHHHHHHcCCCHhHEEEeCCCC---chhhcCCHHH
Confidence 578888999999998886443221 11011 2 44567788899999999999994 99998211 1237889999
Q ss_pred HHHHHHHHhhcCCCceeEee
Q psy13372 168 AERLIRELRAHGISNVQLQF 187 (273)
Q Consensus 168 ~~~li~~~~~~~~~~~g~~~ 187 (273)
..++++.|+.+...++-+++
T Consensus 214 n~~lL~~l~~l~~lg~PvL~ 233 (314)
T 3tr9_A 214 NFYLLNKLPEFVAMGLPVLS 233 (314)
T ss_dssp HHHHHHTTHHHHTTSSCBEE
T ss_pred HHHHHHHHHHHhcCCCCEEE
Confidence 99999665554333333333
No 63
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=94.85 E-value=0.28 Score=42.03 Aligned_cols=139 Identities=10% Similarity=-0.038 Sum_probs=76.9
Q ss_pred ccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcC----Cee-EEEecCCccccCCCCCchhHHH-HHHHHHHH
Q psy13372 20 AANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHG----LKQ-VLINTEVDENFGYAAVKGKESE-FRASLEKT 93 (273)
Q Consensus 20 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~g----L~i-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 93 (273)
..++++.++.+++.|.+.+=+.+.. ..+.++..++.+++. +.+ .++++... .. .+..+. .++.++..
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~~-~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~----~~--~~~~~~~~l~~L~~l 123 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSGC-LNDFKKAIEIINKYQNLTNIKLVTTIGVHPT----RT--NELKQEGYLDELLLL 123 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCCS-HHHHHHHHHHHHHHGGGCSSEEEEEECCCGG----GG--GGGGSTTHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCcEEEEccCC-HHHHHHHHHHHHHCCCcccceEEEEEEECcc----hh--hcCCchHHHHHHHHH
Confidence 4589999999999999887665432 134566677777775 133 34443211 10 111111 33444444
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhh-CCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELER-HSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
++. -.-+.+.+ |-.+-+.. .. .....+...+.+++-+++|++ ++..+.|+.-. ..++.++++
T Consensus 124 ~~~---~~~~vvAI--GEiGLD~~-~~-~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~----------A~~d~l~iL 186 (325)
T 3ipw_A 124 CEK---NIDKVVAI--GEIGLDYE-RL-QFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK----------SWSDLCQLN 186 (325)
T ss_dssp HHH---TGGGEEEE--EEEEEETT-CC-SSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES----------CHHHHHHHH
T ss_pred Hhc---CCCCEEEE--EeeecCCC-cC-CCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc----------hHHHHHHHH
Confidence 432 11133333 22211100 00 112356667889999999999 99999999732 356778888
Q ss_pred HHHhhcCCCceeE
Q psy13372 173 RELRAHGISNVQL 185 (273)
Q Consensus 173 ~~~~~~~~~~~g~ 185 (273)
++...+..+.
T Consensus 187 ---~~~~~~~~~g 196 (325)
T 3ipw_A 187 ---KELGYNGCKG 196 (325)
T ss_dssp ---HHTTCTTSCE
T ss_pred ---HhcCCCCCcE
Confidence 7765433333
No 64
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=94.85 E-value=1.3 Score=37.31 Aligned_cols=94 Identities=11% Similarity=0.064 Sum_probs=65.2
Q ss_pred HHHHHHHHHcCCCeEEecCC--CCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCcccCCHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSG--KTESSRTQPIASEDPYTTLKENLIYACAELERHSLT-ALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~ 167 (273)
.+.++.+++.|+..+..|.. ........| .+++..+...+.|.+..+.|.++||. |.+-|. -.|..+.++
T Consensus 136 ~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~-~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG------~Gf~kt~~~ 208 (294)
T 2dqw_A 136 ERMVALAARHGVAAVVMHMPVPDPATMMAHA-RYRDVVAEVKAFLEAQARRALSAGVPQVVLDPG------FGFGKLLEH 208 (294)
T ss_dssp HHHHHHHHHHTCEEEEECCSSSCTTTGGGGC-CCSSHHHHHHHHHHHHHHHHHHTTCSCEEEECC------TTSSCCHHH
T ss_pred hHHHHHHHHhCCCEEEEcCCCCCCccccccC-ccccHHHHHHHHHHHHHHHHHHCCCCcEEEcCC------CCcccCHHH
Confidence 36788899999999999873 221111111 25666788899999999999999995 888872 136778889
Q ss_pred HHHHHHHHhhcCCCceeEeeeccc
Q psy13372 168 AERLIRELRAHGISNVQLQFDFFN 191 (273)
Q Consensus 168 ~~~li~~~~~~~~~~~g~~~D~~h 191 (273)
.+++++.++.+..+++-+++=+++
T Consensus 209 n~~ll~~l~~~~~~g~Pvl~G~Sr 232 (294)
T 2dqw_A 209 NLALLRRLDEIVALGHPVLVGLSR 232 (294)
T ss_dssp HHHHHHTHHHHHTTSSCBEECCTT
T ss_pred HHHHHHHHHHHhcCCCCEEEEecc
Confidence 999996666664444444443333
No 65
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=94.70 E-value=1.1 Score=39.00 Aligned_cols=206 Identities=12% Similarity=0.080 Sum_probs=109.5
Q ss_pred cccccccccccccccCHH---HHHHHHHHcCCCeEEec--CCCC-----CCCHHHHHHHHHHcCCeeEE-EecCCccccC
Q psy13372 7 KLAANLTLLFNDLAANYL---DKYRVAAELGFRYIESW--FPPV-----GVTLEQLVAAQTRHGLKQVL-INTEVDENFG 75 (273)
Q Consensus 7 k~~~~~~~~~~~~~~~~~---~~l~~~~~~G~~~vEl~--~~~~-----~~~~~~~~~~l~~~gL~i~~-~~~~~~~~~~ 75 (273)
++|+|. +.-.. +.+ +-++.++++||+.|=-. .+.+ ....+++.+.+++.|+++.. ++.......|
T Consensus 28 ~LGiSv-Yp~~~---~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg 103 (385)
T 1x7f_A 28 KLGISL-YPEHS---TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLG 103 (385)
T ss_dssp EEEEEE-CGGGS---CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC----
T ss_pred heEEEE-cCCCC---CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcC
Confidence 589877 22222 334 56889999999988333 3422 12357888889999999985 3321111122
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHh-hCCcEEEEccCCC
Q psy13372 76 YAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELE-RHSLTALIEPVNQ 154 (273)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~-~~gv~i~lE~~~~ 154 (273)
.+. .-+...+.+|+..+++-.|.-. .+.+.+.. .+|++|.|=- +
T Consensus 104 ~s~-------------~dl~~f~~lGi~gLRLD~Gf~~--------------------~eia~ls~n~~glkIeLNA-S- 148 (385)
T 1x7f_A 104 ISY-------------SDLSFFAELGADGIRLDVGFDG--------------------LTEAKMTNNPYGLKIELNV-S- 148 (385)
T ss_dssp --C-------------CCTHHHHHHTCSEEEESSCCSS--------------------HHHHHHTTCTTCCEEEEET-T-
T ss_pred CCH-------------HHHHHHHHcCCCEEEEcCCCCH--------------------HHHHHHhcCCCCCEEEEeC-c-
Confidence 211 1233456689999999766421 12344444 3678887632 1
Q ss_pred CCCCCcccCCHHHHHHHHHHHhhc-CCCceeEeeecccccccCCChH------HHHHhcCCcceeEEeccCCCCCC--CC
Q psy13372 155 HSVPGYYLSSFRVAERLIRELRAH-GISNVQLQFDFFNAQRICGDLT------HTFGACRDLIGHVQIAQAPDRQE--PH 225 (273)
Q Consensus 155 ~~~~~~~~~~~~~~~~li~~~~~~-~~~~~g~~~D~~h~~~~~~~~~------~~i~~~~~~i~~vHi~d~~~~~~--~g 225 (273)
++.+....++ +.- +.+++-.|.+++.-...|-+.. ++++.++=++..+=-.|...|++ ..
T Consensus 149 --------t~~~~l~~l~---~~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPwpl~ 217 (385)
T 1x7f_A 149 --------NDIAYLENIL---SHQANKSALIGCHNFYPQKFTGLPYDYFIRCSERFKKHGIRSAAFITSHVANIGPWDIN 217 (385)
T ss_dssp --------SCSSHHHHHT---TSSCCGGGEEEECCCBCSTTCSBCHHHHHHHHHHHHHTTCCCEEEECCSSCCBCSSSCC
T ss_pred --------CCHHHHHHHH---HcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCccccCCcccc
Confidence 1344444444 322 3356888888888777676644 44555665666555555433333 23
Q ss_pred CCCcc--------cHHHHHHHHHHcC-CCceEEEeeecCCChHHHHH
Q psy13372 226 ARGEI--------DYAYVFELLAREG-YEGYVGLEYKPQGNTKEGLE 263 (273)
Q Consensus 226 ~~G~i--------d~~~i~~~L~~~g-y~g~~~lE~~~~~~~~~~~~ 263 (273)
+ |-. +...-...|...| -+..++=.....++..+.++
T Consensus 218 e-GLPTLE~HR~~~~~~~a~~L~~~g~iD~ViIGd~~~Se~el~~l~ 263 (385)
T 1x7f_A 218 D-GLCTLEEHRNLPIEVQAKHLWATGLIDDVIIGNAYASEEELEKLG 263 (385)
T ss_dssp S-CCBSBGGGTTSCHHHHHHHHHHTTSCCEEEECSBCCCHHHHHHHH
T ss_pred C-CCCchHHHCCCCHHHHHHHHHhcCCCCEEEECCCCCCHHHHHHHH
Confidence 2 322 3333344455557 55444434333333333333
No 66
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=94.66 E-value=0.72 Score=43.62 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=80.0
Q ss_pred CHHHHHHHHHHcCCCeEEe---cCC------------------CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCc
Q psy13372 22 NYLDKYRVAAELGFRYIES---WFP------------------PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVK 80 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl---~~~------------------~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~ 80 (273)
....-+++++++||++|=+ ... +.+.+++++.+-.++.|+.+...+-..+ .
T Consensus 372 ~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~-~------- 443 (738)
T 2d73_A 372 NVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSA-S------- 443 (738)
T ss_dssp HHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTT-B-------
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCC-c-------
Confidence 3566789999999999988 211 0124589999999999999998654321 0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCC--CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHIMSGKTES--SRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
.....+++.++++..+++|++.|.+- .++. +++ .-..-+.++....++++.|+++++.+-++
T Consensus 444 --~~n~e~~~d~~f~~~~~~Gv~GVKvd--F~g~~~~r~----~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfH 507 (738)
T 2d73_A 444 --VRNYERHMDKAYQFMADNGYNSVKSG--YVGNIIPRG----EHHYGQWMNNHYLYAVKKAADYKIMVNAH 507 (738)
T ss_dssp --HHHHHHHHHHHHHHHHHTTCCEEEEE--CCSSCBSTT----CCTTSHHHHHHHHHHHHHHHHTTCEEEET
T ss_pred --hhhHHHHHHHHHHHHHHcCCCEEEeC--ccccCcCCc----ccccchHHHHHHHHHHHHHHHcCcEEEcc
Confidence 01123456789999999999999883 3321 100 11123678899999999999999988776
No 67
>2ekg_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; flavoenzyme, prodh, beta-alpha-barrel inhibitor, inactivation, flavocyanine; HET: LYX FAD; 1.90A {Thermus thermophilus} PDB: 2g37_A*
Probab=94.20 E-value=2 Score=36.72 Aligned_cols=119 Identities=15% Similarity=0.159 Sum_probs=74.5
Q ss_pred HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC-eEEecCCCCCCCCCCCCCCcchHHHH
Q psy13372 51 QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP-AIHIMSGKTESSRTQPIASEDPYTTL 129 (273)
Q Consensus 51 ~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~-~i~~~~G~~~~~~~~~~~~~~~~~~~ 129 (273)
+..+.+++.|+.++ +... ++. ..+++..+...+.+.++|+..+..+.. .|.+-+...... -.++.+
T Consensus 66 ~~~~~l~~~G~~~~-ld~l--gE~--~~~~~~a~~~~~~yl~~i~~i~~~~~~~~vSvKlSalg~~--------~~~~~~ 132 (327)
T 2ekg_A 66 KAAEALEREGVHAI-LDLL--GEM--VRTEEEARAFQRGLLELVWALAGKPWPKYISLXLTQLGLD--------LSEDLA 132 (327)
T ss_dssp HHHHHHHHTTCEEE-EEEE--CSC--CCSHHHHHHHHHHHHHHHHHHTTCSSCEEEEECGGGGTTT--------TCHHHH
T ss_pred HHHHHHHhCCCEEE-Eecc--ccc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEcccCccc--------cCHHHH
Confidence 33355778899854 4322 122 134566677778888888887765544 455543333222 237899
Q ss_pred HHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecc
Q psy13372 130 KENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFF 190 (273)
Q Consensus 130 ~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~ 190 (273)
.++++++++.|+++||.+.|--.. ....+.+++++++|..-+-|.+|+++-.+
T Consensus 133 ~~rl~~i~~~A~~~gv~v~IDaEe--------~~~~~~tl~l~~~l~~~~~~~vg~tlQAY 185 (327)
T 2ekg_A 133 LALLREVLREAEPRGVFVRLDMED--------SPRVEATLRLYRALREEGFSQVGIVLQSY 185 (327)
T ss_dssp HHHHHHHHHHHGGGTEEEEECCCC--------GGGHHHHHHHHHHHHHTTCCSEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCEEEEcCcc--------ccchHHHHHHHHHHhhcCCCceEEEEeCc
Confidence 999999999999999999987632 12345577777443332125677776644
No 68
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=93.99 E-value=2.3 Score=35.85 Aligned_cols=74 Identities=11% Similarity=0.138 Sum_probs=55.4
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCCHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
+.++.+++.|+..|..|..+.+. +++..+...+.|.+..+.|.+.||. |.+-|. -.|..+.++.
T Consensus 150 ~m~~~aa~~g~~vVlmh~~G~p~-------y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg------~Gfgk~~~~n 216 (297)
T 1tx2_A 150 KIAEVAAHYDVPIILMHNRDNMN-------YRNLMADMIADLYDSIKIAKDAGVRDENIILDPG------IGFAKTPEQN 216 (297)
T ss_dssp HHHHHHHHHTCCEEEECCCSCCC-------CSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC------TTSSCCHHHH
T ss_pred HHHHHHHHhCCcEEEEeCCCCCC-------cchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCC------CCcCCCHHHH
Confidence 56788888999999888632211 3456777888999999999999997 999983 2257788888
Q ss_pred HHHHHHHhhc
Q psy13372 169 ERLIRELRAH 178 (273)
Q Consensus 169 ~~li~~~~~~ 178 (273)
.++++.++.+
T Consensus 217 ~~ll~~l~~l 226 (297)
T 1tx2_A 217 LEAMRNLEQL 226 (297)
T ss_dssp HHHHHTGGGG
T ss_pred HHHHHHHHHH
Confidence 8999554444
No 69
>4h6q_A Proline dehydrogenase; BETA8-alpha8-barrel, flavoenzyme, oxidoreductase; HET: FAD; 1.36A {Deinococcus radiodurans} PDB: 4h6r_A*
Probab=93.70 E-value=1.2 Score=37.75 Aligned_cols=120 Identities=18% Similarity=0.166 Sum_probs=74.1
Q ss_pred HHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC-CeEEecCCCCCCCCCCCCCCcchHHHHHHH
Q psy13372 54 AAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI-PAIHIMSGKTESSRTQPIASEDPYTTLKEN 132 (273)
Q Consensus 54 ~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~-~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~ 132 (273)
+.+++.|+.++ +..- ++. ..+++..+...+.+.++|+.....+. +.|.+-+....... .....+.+.++
T Consensus 50 ~~l~~~G~~~~-ld~l--GE~--~~~~~eA~~~~~~yl~~i~~i~~~~~~~~vSvKlSalg~~~-----~~~~~~~~~~~ 119 (312)
T 4h6q_A 50 QALERDGIAGN-LDLL--GEF--IDSPAKCTEFADDVIKLIEAAHAAGIKPYVSIKLSSVGQGK-----DENGEDLGLTN 119 (312)
T ss_dssp HHHHHTTCEEE-EEEC--CCC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGTTTTC-----EETTEEHHHHH
T ss_pred HHHHhCCCEEE-EEec--cCC--CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEEEehhhccccc-----CcccHHHHHHH
Confidence 45777898744 3322 122 23566677778888888888776553 46777544443321 11123467899
Q ss_pred HHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHH-hhcCCCceeEeeeccc
Q psy13372 133 LIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIREL-RAHGISNVQLQFDFFN 191 (273)
Q Consensus 133 l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~-~~~~~~~~g~~~D~~h 191 (273)
++++++.|+++|+.+.|--... ...+.+.++.++| ++.+.|.+|+++-.+-
T Consensus 120 l~~i~~~A~~~~v~v~iDaEe~--------~~~~~tl~~~~~l~~~~~~~~vg~t~QaYl 171 (312)
T 4h6q_A 120 ARRIIAKAKEYGGFICLDMEDH--------TRVDVTLEQFRTLVGEFGAEHVGTVLQSYL 171 (312)
T ss_dssp HHHHHHHHHHTTCEEEECCCSG--------GGHHHHHHHHHHHHHHHCTTTEEEEEETTB
T ss_pred HHHHHHHHHHcCCEEEEccCcc--------cchHHHHHHHHHHHHHcCCCcEEEEeehhc
Confidence 9999999999999999876321 1233344444332 4445688998876544
No 70
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=93.65 E-value=2.8 Score=35.21 Aligned_cols=82 Identities=11% Similarity=-0.008 Sum_probs=59.7
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCC-CCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCCH-H
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRT-QPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSSF-R 166 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~~-~ 166 (273)
+.++.+++.|+..|..|..+.+..-. ..+.+++..+...+.|.+..+.|.++||. |.+-|. -.|..+. +
T Consensus 131 ~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG------~Gf~kt~~~ 204 (294)
T 2y5s_A 131 GAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPG------FGFGKAVVD 204 (294)
T ss_dssp THHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC------TTSSSCTTH
T ss_pred HHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCC------CcccccchH
Confidence 57888899999999988633222100 01124566788899999999999999997 999983 2367788 8
Q ss_pred HHHHHHHHHhhcC
Q psy13372 167 VAERLIRELRAHG 179 (273)
Q Consensus 167 ~~~~li~~~~~~~ 179 (273)
+-+++++.++.+.
T Consensus 205 ~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 205 DNYALLAALPDTA 217 (294)
T ss_dssp HHHHHHHTGGGGS
T ss_pred HHHHHHHHHHHHH
Confidence 9999996666665
No 71
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=93.62 E-value=1.5 Score=37.05 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
...++.+.++++...+-|++..++-+--++... .|...-..++.+.+.|+++.++|+++|+++.++|
T Consensus 56 ~~Nl~~l~~il~~n~~~~I~~yRiSS~l~P~~t-hp~~~~~~~~~~~~~l~~iG~~a~~~~iRLS~HP 122 (310)
T 3tc3_A 56 SSNLLCLKNILEWNLKHEILFFRISSNTIPLAS-HPKFHVNWKDKLSHILGDIGDFIKENSIRISMHP 122 (310)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEECCTTSSTTTT-STTCCCCHHHHTHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEeCcccCCCcc-ccccccchHHHHHHHHHHHHHHHHHcCcEEEecC
Confidence 345678888999999999999999776655432 1211223356778889999999999999999998
No 72
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=93.61 E-value=5.1 Score=38.04 Aligned_cols=137 Identities=12% Similarity=0.035 Sum_probs=82.2
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCCCCCCcccCCHHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
...++.|...|++.++++.. . .. ++.++...+.+++.|.. ..++-......+..-..+++.+
T Consensus 200 ~~~i~~a~~~Gvd~irIf~s-~---------n~------l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~ 263 (718)
T 3bg3_A 200 FKFCEVAKENGMDVFRVFDS-L---------NY------LPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYY 263 (718)
T ss_dssp HHHHHHHHHHTCCEEEEECS-S---------CC------HHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHH
T ss_pred HHHHHHHHhcCcCEEEEEec-H---------HH------HHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHH
Confidence 55677777889999998742 1 11 34677778888888854 4455331000011123478888
Q ss_pred HHHHHHHhhcCCCceeEeeecccccccC--CChHHHHHhcC-CcceeEEeccCCCC--------------------CC--
Q psy13372 169 ERLIRELRAHGISNVQLQFDFFNAQRIC--GDLTHTFGACR-DLIGHVQIAQAPDR--------------------QE-- 223 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~~~D~~h~~~~~--~~~~~~i~~~~-~~i~~vHi~d~~~~--------------------~~-- 223 (273)
.++++++.+.+...+.+ -|+.-..... .++...++... +-..++|.+|+.+. ..
T Consensus 264 ~~~a~~l~~~Ga~~I~l-~DT~G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ti~GlG 342 (718)
T 3bg3_A 264 MGLAEELVRAGTHILCI-KDMAGLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVAADSMS 342 (718)
T ss_dssp HHHHHHHHHHTCSEEEE-ECTTSCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEBCGGGC
T ss_pred HHHHHHHHHcCCCEEEE-cCcCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEecCcccc
Confidence 99997777776544443 3554332211 12233333333 44578999986432 01
Q ss_pred CCCCCcccHHHHHHHHHHcCCC
Q psy13372 224 PHARGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 224 ~g~~G~id~~~i~~~L~~~gy~ 245 (273)
-+. |..+...++..|+..||+
T Consensus 343 ert-GN~~lE~vv~~L~~~g~~ 363 (718)
T 3bg3_A 343 GMT-SQPSMGALVACTRGTPLD 363 (718)
T ss_dssp STT-SCCBHHHHHHHHTTSTTC
T ss_pred ccc-CchhHHHHHHHHHhcCCC
Confidence 135 999999999999998876
No 73
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=93.60 E-value=2.7 Score=34.86 Aligned_cols=184 Identities=14% Similarity=0.061 Sum_probs=107.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCC--CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPV--GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
++.++.+...+.|.++|.+..... ..+.+.++++.+..++.+..- ++.. ++ ..++.|..
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~k------dfii--d~-----------~qv~~A~~ 133 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRK------DFVV--QP-----------YQIHEARA 133 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEE------SCCC--SH-----------HHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEEC------cccc--CH-----------HHHHHHHH
Confidence 677888888888999998875421 123455555555556655532 1112 11 13566778
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
+|+..|.+..... + -+.++++.+.+++.|+.+.+|.+ |.+++.+.+ +.+
T Consensus 134 ~GAD~VlLi~a~l---------~-------~~~l~~l~~~a~~lGl~~lvev~-----------t~ee~~~A~----~~G 182 (272)
T 3qja_A 134 HGADMLLLIVAAL---------E-------QSVLVSMLDRTESLGMTALVEVH-----------TEQEADRAL----KAG 182 (272)
T ss_dssp TTCSEEEEEGGGS---------C-------HHHHHHHHHHHHHTTCEEEEEES-----------SHHHHHHHH----HHT
T ss_pred cCCCEEEEecccC---------C-------HHHHHHHHHHHHHCCCcEEEEcC-----------CHHHHHHHH----HCC
Confidence 9999999854332 1 12467778888899999998863 466765555 346
Q ss_pred CCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee-cCCCh
Q psy13372 180 ISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK-PQGNT 258 (273)
Q Consensus 180 ~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~-~~~~~ 258 (273)
.+.+|++- ......+.++ +.++++.+.+.. +...... |-|.-.+-++.+.+.|.+|.++-+-. ...++
T Consensus 183 ad~IGv~~--r~l~~~~~dl-~~~~~l~~~v~~-------~~pvVae-gGI~t~edv~~l~~~GadgvlVGsal~~a~dp 251 (272)
T 3qja_A 183 AKVIGVNA--RDLMTLDVDR-DCFARIAPGLPS-------SVIRIAE-SGVRGTADLLAYAGAGADAVLVGEGLVTSGDP 251 (272)
T ss_dssp CSEEEEES--BCTTTCCBCT-THHHHHGGGSCT-------TSEEEEE-SCCCSHHHHHHHHHTTCSEEEECHHHHTCSCH
T ss_pred CCEEEECC--CcccccccCH-HHHHHHHHhCcc-------cCEEEEE-CCCCCHHHHHHHHHcCCCEEEEcHHHhCCCCH
Confidence 67788872 1111112232 223343333210 0111122 44443344566778999999998843 45688
Q ss_pred HHHHHHHHH
Q psy13372 259 KEGLEEFLK 267 (273)
Q Consensus 259 ~~~~~~~~~ 267 (273)
.+.++ .+.
T Consensus 252 ~~~~~-~l~ 259 (272)
T 3qja_A 252 RAAVA-DLV 259 (272)
T ss_dssp HHHHH-HHH
T ss_pred HHHHH-HHH
Confidence 88888 444
No 74
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=93.58 E-value=0.67 Score=43.28 Aligned_cols=103 Identities=12% Similarity=0.090 Sum_probs=77.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC------------CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP------------VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRAS 89 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~------------~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (273)
.....+++++++||++|=+...+ ...+++++.+-.++.|+.+...+-..+ ..++
T Consensus 310 ~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~--------------~~~~ 375 (641)
T 3a24_A 310 TYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHA--------------FERD 375 (641)
T ss_dssp HHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHH--------------HHTS
T ss_pred HHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcc--------------hHHH
Confidence 35677999999999999886321 124689999999999999997653211 1234
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+++.++..+++|++.|.+- .+..+ . +..++...++++.|+++++.+.++
T Consensus 376 ~~~~~~~~~~~Gv~gvK~D--f~~~~------~----Q~~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 376 MENVCRHYAEMGVKGFKVD--FMDRD------D----QEMTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HHHHHHHHHHHTCCEEEEE--CCCCC------S----HHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEC--CCCCC------c----HHHHHHHHHHHHHHHHcCCEEEcC
Confidence 5778889999999999883 33222 1 578889999999999999887765
No 75
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.25 E-value=1 Score=37.50 Aligned_cols=119 Identities=13% Similarity=0.058 Sum_probs=74.9
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC----C----------CCC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP----V----------GVT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKE 83 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~----~----------~~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
......++.++++||.|| +++|- + ... ..++.+..++.||.-..+. .+++
T Consensus 108 ~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v----------~~~e-- 174 (286)
T 2p10_A 108 MVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYV----------FSPE-- 174 (286)
T ss_dssp CCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEE----------CSHH--
T ss_pred cCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEec----------CCHH--
Confidence 478899999999999999 88871 1 111 2233344555555433211 1221
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-----CCCCCCCCCCcchHHHHHHHHHHHHHHHhhC--CcEEEEccCCCCC
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-----ESSRTQPIASEDPYTTLKENLIYACAELERH--SLTALIEPVNQHS 156 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~i~lE~~~~~~ 156 (273)
..+.+.++|+..|.+|+|.- +.. .....+...+.++++.+.+++. +|.+...
T Consensus 175 ---------eA~amA~agpDiI~~h~glT~gglIG~~------~avs~~~~~e~i~~i~~a~~~vnpdvivLc~------ 233 (286)
T 2p10_A 175 ---------DAVAMAKAGADILVCHMGLTTGGAIGAR------SGKSMDDCVSLINECIEAARTIRDDIIILSH------ 233 (286)
T ss_dssp ---------HHHHHHHHTCSEEEEECSCC---------------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEE------
T ss_pred ---------HHHHHHHcCCCEEEECCCCCCCCcccCC------CcccHHHhHHHHHHHHHHHHHhCCCcEEEec------
Confidence 12334578999999998832 222 3445777778888888888865 4554433
Q ss_pred CCCcccCCHHHHHHHHHHHhhc
Q psy13372 157 VPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 157 ~~~~~~~~~~~~~~li~~~~~~ 178 (273)
+.-+.+++++..++ +..
T Consensus 234 --gGpIstpeDv~~~l---~~t 250 (286)
T 2p10_A 234 --GGPIANPEDARFIL---DSC 250 (286)
T ss_dssp --STTCCSHHHHHHHH---HHC
T ss_pred --CCCCCCHHHHHHHH---hcC
Confidence 12478999999999 765
No 76
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=93.14 E-value=0.58 Score=39.41 Aligned_cols=91 Identities=15% Similarity=0.174 Sum_probs=55.2
Q ss_pred HHH-HHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 93 TIQ-YACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 93 ~i~-~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
.++ +++.+|+..|+++.+..... .....+...+.|.++++.|.++|+.+.|+.|... ++..-.+.+...++
T Consensus 47 d~~~l~~~~G~N~vRi~~~~~~~~------~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~--~g~~~~~~~~~~~~ 118 (306)
T 2cks_A 47 SLDALAYDWKADIIRLSMYIQEDG------YETNPRGFTDRMHQLIDMATARGLYVIVDWHILT--PGDPHYNLDRAKTF 118 (306)
T ss_dssp HHHHHHHTSCCSEEEEEEESSTTS------GGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCS--SCCGGGGHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeeecCCC------cccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCC--CCCcccCHHHHHHH
Confidence 344 45679999999975421111 1111123568899999999999999999986532 22222234555555
Q ss_pred HHHH-hhc-CCCceeEeeeccccc
Q psy13372 172 IREL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 172 i~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
.+.+ +.. ++|+| + +++.|-.
T Consensus 119 ~~~ia~~y~~~~~V-~-~el~NEP 140 (306)
T 2cks_A 119 FAEIAQRHASKTNV-L-YEIANEP 140 (306)
T ss_dssp HHHHHHHHTTCSSE-E-EECCSCC
T ss_pred HHHHHHHhCCCCcE-E-EEcCCCC
Confidence 5332 222 45776 5 9998754
No 77
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=93.08 E-value=0.32 Score=41.87 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=61.4
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
..+.+..+.++|++-|.+..|.. ...+.++.+.++..+.++. +++ ++ +.+-.|.+.|
T Consensus 48 tv~Qi~~l~~aG~diVRvavp~~-~~a~al~~I~~~~~vPlvaDiHf----------~~-----------~lal~a~e~G 105 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAVPHK-EDVEALEEIVKKSPMPVIADIHF----------AP-----------SYAFLSMEKG 105 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEECCSH-HHHHHHHHHHHHCSSCEEEECCS----------CH-----------HHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEeCCCCh-HHHHHHHHHHhcCCCCEEEeCCC----------CH-----------HHHHHHHHhC
Confidence 44556667788999999999864 5678888888887766653 221 11 1222256678
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
+..+++.||+.+.. +.++++++.|+++|+.+-|
T Consensus 106 ~dklRINPGNig~~---------------~~~~~vv~~ak~~~~piRI 138 (366)
T 3noy_A 106 VHGIRINPGNIGKE---------------EIVREIVEEAKRRGVAVRI 138 (366)
T ss_dssp CSEEEECHHHHSCH---------------HHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEECCcccCch---------------hHHHHHHHHHHHcCCCEEE
Confidence 88899988877421 2467788889999976655
No 78
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.06 E-value=0.75 Score=38.45 Aligned_cols=93 Identities=6% Similarity=0.088 Sum_probs=65.7
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCCHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~~~~ 167 (273)
+.++.+++.|+..|..|..+.+.. ...|+.+.+..+.+.+.|.+..+.|.++||. |.+-|. -.|..+.++
T Consensus 115 ~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg------~Gf~k~~~~ 188 (280)
T 1eye_A 115 AMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPG------LGFAKTAQH 188 (280)
T ss_dssp THHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC------TTSSCCHHH
T ss_pred HHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECC------CCcccCHHH
Confidence 578888999999999986333221 1110124566788899999999999999997 999983 237889999
Q ss_pred HHHHHHHHhhcCCCceeEeeecc
Q psy13372 168 AERLIRELRAHGISNVQLQFDFF 190 (273)
Q Consensus 168 ~~~li~~~~~~~~~~~g~~~D~~ 190 (273)
.+++++.++.+..+++-+++=++
T Consensus 189 n~~ll~~l~~~~~~g~Pvl~G~S 211 (280)
T 1eye_A 189 NWAILHALPELVATGIPVLVGAS 211 (280)
T ss_dssp HHHHHHTHHHHHTTSSCBEECCT
T ss_pred HHHHHHHHHHhhcCCCCEEEEec
Confidence 99999776666444444444333
No 79
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=93.04 E-value=3.8 Score=34.97 Aligned_cols=193 Identities=10% Similarity=-0.005 Sum_probs=104.3
Q ss_pred HHHHHHHcCCCeE-EecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccc-cCCCCC-------------ch-hHHHHHHH
Q psy13372 26 KYRVAAELGFRYI-ESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDEN-FGYAAV-------------KG-KESEFRAS 89 (273)
Q Consensus 26 ~l~~~~~~G~~~v-El~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~-~~~~~~-------------~~-~~~~~~~~ 89 (273)
.++.++++|...| |.....-..++..++++.++.|+.|++-..++... ++..-. ++ ......+.
T Consensus 51 el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 130 (330)
T 3pnz_A 51 DVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDK 130 (330)
T ss_dssp HHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHH
T ss_pred HHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccCCHHH
Confidence 5666788898876 44432224789999999999999999765443211 000000 11 01111222
Q ss_pred HHHHHHHH-----HHcCCCe--EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 90 LEKTIQYA-----CALNIPA--IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 90 ~~~~i~~a-----~~lG~~~--i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
+...+-.- ..-|++. |-+.... ....+.-.+.++.-+++|++.|+.+.+++-. .
T Consensus 131 l~~~~~~ei~~Gi~~t~vkaGvIEiGld~-----------~~~~~~q~~~f~aq~~~A~~~glPViiH~r~--------g 191 (330)
T 3pnz_A 131 LTEFVVNEVENGLEGTPYKAGQVKFGTGY-----------NMITPLEEKTIRAVARAHHETKAPIHSHTEA--------G 191 (330)
T ss_dssp HHHHHHHHHHTCSTTSSCCEEEEEEECBT-----------TBCCHHHHHHHHHHHHHHHHHCCCEEEECGG--------G
T ss_pred HHHHHHHHHHhhCCCcCcCcCeEEEEcCC-----------CCCCHHHHHHHHHHHHHHHHHCCeEEEeCCC--------C
Confidence 22222111 1223333 3222111 1123345677888899999999999999721 1
Q ss_pred CCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcc----c--HHHHH
Q psy13372 163 SSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEI----D--YAYVF 236 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~i----d--~~~i~ 236 (273)
....+.++++ ++.+.+.-++.+ +|.... +++ +..+++.+.=.++-+... |.. + -...+
T Consensus 192 ~~a~~~l~iL---~e~~~~~~~vvi--~H~~~s-~~~-e~a~~~l~~G~~i~~~g~---------~t~~~~~~~~~~~~l 255 (330)
T 3pnz_A 192 TMALEQIEIL---KQENIPLEYLSI--GHMDRN-LDP-YYHKQVAKTGAFMSFDGI---------AKIKYAPESARIAAI 255 (330)
T ss_dssp CCHHHHHHHH---HHTTCCGGGEEE--TTGGGS-CCH-HHHHHHHTTTCEEEECCT---------TCTTTCCHHHHHHHH
T ss_pred cChHHHHHHH---HHcCCCCCeEEE--ecCCCC-CCH-HHHHHHHHcCcEEEEccC---------cccCCCChHHHHHHH
Confidence 1234457788 776555434433 576543 444 344444444455555532 221 1 22346
Q ss_pred HHHHHcCCCceEEEeee
Q psy13372 237 ELLAREGYEGYVGLEYK 253 (273)
Q Consensus 237 ~~L~~~gy~g~~~lE~~ 253 (273)
+.+.+.||...+++|..
T Consensus 256 ~~lv~~g~~drilleTD 272 (330)
T 3pnz_A 256 LYLVSEGFEDQILVSGD 272 (330)
T ss_dssp HHHHHTTCGGGEEECCC
T ss_pred HHHHHcCCCCeEEEeCC
Confidence 66777898889999975
No 80
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=92.94 E-value=3.1 Score=34.68 Aligned_cols=80 Identities=11% Similarity=-0.022 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC--C--CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP--V--GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~--~--~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
++++ +..+.+.|.+-||+.... + --+...++.+.+..++.+..+--|-++++-. ++. -++.++.-|+.+
T Consensus 48 s~~~-a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Y--s~~----E~~~M~~dI~~~ 120 (287)
T 3iwp_A 48 SVES-AVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLY--SDR----EIEVMKADIRLA 120 (287)
T ss_dssp SHHH-HHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCC--CHH----HHHHHHHHHHHH
T ss_pred CHHH-HHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCccc--CHH----HHHHHHHHHHHH
Confidence 5444 455678999999999542 1 1345666666666677776655454444423 222 256788899999
Q ss_pred HHcCCCeEEec
Q psy13372 98 CALNIPAIHIM 108 (273)
Q Consensus 98 ~~lG~~~i~~~ 108 (273)
.++|+.-|++.
T Consensus 121 ~~~GAdGvVfG 131 (287)
T 3iwp_A 121 KLYGADGLVFG 131 (287)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEe
Confidence 99999999994
No 81
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=92.92 E-value=0.74 Score=37.05 Aligned_cols=133 Identities=15% Similarity=0.122 Sum_probs=84.5
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.+.+.||++|=++- ..++..++.++..++.+.+...+ ..|..+ . +....-++.|-++
T Consensus 19 ~~i~~l~~~a~~~~~~aVcv~p----~~v~~~~~~l~~~~v~v~~vigF---P~G~~~-~-------~~k~~e~~~Ai~~ 83 (220)
T 1ub3_A 19 EEVAKAAEEALEYGFYGLCIPP----SYVAWVRARYPHAPFRLVTVVGF---PLGYQE-K-------EVKALEAALACAR 83 (220)
T ss_dssp HHHHHHHHHHHHHTCSEEECCG----GGHHHHHHHCTTCSSEEEEEEST---TTCCSC-H-------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEECH----HHHHHHHHHhCCCCceEEEEecC---CCCCCc-h-------HHHHHHHHHHHHc
Confidence 3678889999999999998752 33555566676667887765422 122211 1 2233456667779
Q ss_pred CCCeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
||..|-++. |.. ....++.+.+.+.++.+.+.+.++++.+|+.. + +.++..+.+|-..+.
T Consensus 84 GAdevd~vinig~~---------~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~--------l-~~e~i~~a~~ia~ea 145 (220)
T 1ub3_A 84 GADEVDMVLHLGRA---------KAGDLDYLEAEVRAVREAVPQAVLKVILETGY--------F-SPEEIARLAEAAIRG 145 (220)
T ss_dssp TCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGG--------S-CHHHHHHHHHHHHHH
T ss_pred CCCEEEecccchhh---------hCCCHHHHHHHHHHHHHHHcCCCceEEEecCC--------C-CHHHHHHHHHHHHHh
Confidence 999886653 322 12347788888999999998888999999831 2 355444444222666
Q ss_pred CCCceeEe
Q psy13372 179 GISNVQLQ 186 (273)
Q Consensus 179 ~~~~~g~~ 186 (273)
+...++..
T Consensus 146 GADfVKTs 153 (220)
T 1ub3_A 146 GADFLKTS 153 (220)
T ss_dssp TCSEEECC
T ss_pred CCCEEEeC
Confidence 65555554
No 82
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=92.54 E-value=3.4 Score=33.45 Aligned_cols=140 Identities=8% Similarity=0.010 Sum_probs=77.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.++.+++.|.+.+=...... .+.+.+.++.++++=-..+++.... . .++..+..++.+++.+. .-
T Consensus 19 ~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~l~~~~~~~~~~~G~hP~----~--~~~~~~~~~~~l~~~~~---~~ 88 (259)
T 1zzm_A 19 GDEEASLQRAAQAGVGKIIVPATEA-ENFARVLALAENYQPLYAALGLHPG----M--LEKHSDVSLEQLQQALE---RR 88 (259)
T ss_dssp TCHHHHHHHHHHTTEEEEEEECCSG-GGHHHHHHHHHHCTTEEEEECCCGG----G--GGGCCHHHHHHHHHHHH---HC
T ss_pred cCHHHHHHHHHHcCCCEEEEecCCH-HHHHHHHHHHHhCCCeEEEEEeccc----c--cccCCHHHHHHHHHHHh---cC
Confidence 4789999999999998764433322 4566777778887732223332110 0 01111233455555543 21
Q ss_pred CCCeEEe-cCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 101 NIPAIHI-MSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 101 G~~~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
+.+.+.+ -.|-. ..+ .....+.-.+.+++..++|+++|+.+.++... ..++..+++ ++.+
T Consensus 89 ~~~~~~iGEiGld-~~~-----~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~----------a~~~~~~il---~~~~ 149 (259)
T 1zzm_A 89 PAKVVAVGEIGLD-LFG-----DDPQFERQQWLLDEQLKLAKRYDLPVILHSRR----------THDKLAMHL---KRHD 149 (259)
T ss_dssp CSSEEEEEEEEEE-CCS-----SCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES----------CHHHHHHHH---HHHC
T ss_pred CCCEEEEEEeccC-CCC-----CCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc----------cHHHHHHHH---HhcC
Confidence 2222322 11111 111 11123445678889999999999999999731 346778888 7764
Q ss_pred CCceeEeeeccccc
Q psy13372 180 ISNVQLQFDFFNAQ 193 (273)
Q Consensus 180 ~~~~g~~~D~~h~~ 193 (273)
.+ +++.+ |+.
T Consensus 150 ~~-~~~i~---H~~ 159 (259)
T 1zzm_A 150 LP-RTGVV---HGF 159 (259)
T ss_dssp CT-TCEEE---TTC
T ss_pred CC-CCEEE---EcC
Confidence 33 44444 654
No 83
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.47 E-value=2.2 Score=33.55 Aligned_cols=185 Identities=9% Similarity=0.032 Sum_probs=95.7
Q ss_pred CHHHHHHHHHHc--CCCeEEecCCC-CCCCHHHHHHHHHH-cCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAEL--GFRYIESWFPP-VGVTLEQLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 22 ~~~~~l~~~~~~--G~~~vEl~~~~-~~~~~~~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
++++.++.+.++ |+|.||+..|+ -....+.++++.+. .++.+.. +.- +. ++. +..++.+
T Consensus 11 ~~~~~~~~~~~~~~~~diie~G~p~~~~~g~~~i~~ir~~~~~~~i~~-~~~------~~-~~~---------~~~~~~~ 73 (211)
T 3f4w_A 11 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGVNAIKAIKEKYPHKEVLA-DAK------IM-DGG---------HFESQLL 73 (211)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEE-EEE------EC-SCH---------HHHHHHH
T ss_pred CHHHHHHHHHHhhcCccEEEeCcHHHHhccHHHHHHHHHhCCCCEEEE-EEE------ec-cch---------HHHHHHH
Confidence 677777777665 68888887653 11223444444444 2565532 211 11 111 1237888
Q ss_pred HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhh
Q psy13372 98 CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRA 177 (273)
Q Consensus 98 ~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~ 177 (273)
...|+..+.+|... . .+.+.++.+.++++|+.+.++..++ .++.+..+.+ .+
T Consensus 74 ~~~Gad~v~v~~~~----------~-------~~~~~~~~~~~~~~g~~~~v~~~~~--------~t~~~~~~~~---~~ 125 (211)
T 3f4w_A 74 FDAGADYVTVLGVT----------D-------VLTIQSCIRAAKEAGKQVVVDMICV--------DDLPARVRLL---EE 125 (211)
T ss_dssp HHTTCSEEEEETTS----------C-------HHHHHHHHHHHHHHTCEEEEECTTC--------SSHHHHHHHH---HH
T ss_pred HhcCCCEEEEeCCC----------C-------hhHHHHHHHHHHHcCCeEEEEecCC--------CCHHHHHHHH---HH
Confidence 88999999997421 1 1346677788888899998874321 2343333333 44
Q ss_pred cCCCceeEeeecccc-cccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEe-eecC
Q psy13372 178 HGISNVQLQFDFFNA-QRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLE-YKPQ 255 (273)
Q Consensus 178 ~~~~~~g~~~D~~h~-~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE-~~~~ 255 (273)
.+...+ +++.+.. +..+....+.++++...+..+-+. . . |-|+ ..-.+.+.+.|-++.++-. +...
T Consensus 126 ~g~d~i--~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~-------~-~-gGI~-~~~~~~~~~~Gad~vvvGsai~~~ 193 (211)
T 3f4w_A 126 AGADML--AVHTGTDQQAAGRKPIDDLITMLKVRRKARIA-------V-A-GGIS-SQTVKDYALLGPDVVIVGSAITHA 193 (211)
T ss_dssp HTCCEE--EEECCHHHHHTTCCSHHHHHHHHHHCSSCEEE-------E-E-SSCC-TTTHHHHHTTCCSEEEECHHHHTC
T ss_pred cCCCEE--EEcCCCcccccCCCCHHHHHHHHHHcCCCcEE-------E-E-CCCC-HHHHHHHHHcCCCEEEECHHHcCC
Confidence 443444 4444321 111111234444443322111111 1 1 3335 3445566678888766654 2345
Q ss_pred CChHHHHH
Q psy13372 256 GNTKEGLE 263 (273)
Q Consensus 256 ~~~~~~~~ 263 (273)
.++.+.++
T Consensus 194 ~d~~~~~~ 201 (211)
T 3f4w_A 194 ADPAGEAR 201 (211)
T ss_dssp SSHHHHHH
T ss_pred CCHHHHHH
Confidence 57777777
No 84
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=92.36 E-value=1.3 Score=36.58 Aligned_cols=139 Identities=14% Similarity=0.127 Sum_probs=71.1
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHH---HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLE---QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~---~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
..+++.++.|+++||+.||++...-..+.+ ++.+.+++. +.+.+=............++ ...++.+++.
T Consensus 110 g~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~~~~~~~---~~~I~~~~~d---- 181 (276)
T 1u83_A 110 KKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAELASRQSS---EEWLEYIVED---- 181 (276)
T ss_dssp TCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC------CCS---THHHHHHHHH----
T ss_pred CcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCccccCCCCH---HHHHHHHHHH----
Confidence 378999999999999999999542223333 333444444 66554211100000000122 2223344444
Q ss_pred HHcCCCeEEecC---CCCCCCCCCCCCCcchHHHHHHHHHHH-HHHHhhCCcE-EEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 98 CALNIPAIHIMS---GKTESSRTQPIASEDPYTTLKENLIYA-CAELERHSLT-ALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 98 ~~lG~~~i~~~~---G~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
=..||..|.+-+ |..+--.. ....... .+ ..++...++. +..|- +...+-..+|
T Consensus 182 LeAGA~~ViiEaRESG~~Gi~~~----~g~~r~d------~v~~~i~~~l~~eklifEA-----------p~k~qq~~fI 240 (276)
T 1u83_A 182 MEAGAEKVITEARESGTGGICSS----SGDVRFQ------IVDDIISSDIDINRLIFEA-----------PNKTLQQGFI 240 (276)
T ss_dssp HHHTEEEEEEC----------------------C------CHHHHHTTTSCGGGEEEEC-----------CSHHHHHHHH
T ss_pred HHCCCcEEEEeeeccCCCCccCC----CCCCcHH------HHHHHHHhhCChhhEEEEC-----------CCHHHHHHHH
Confidence 446999999865 21110000 0000001 12 2334455664 88884 2466778899
Q ss_pred HHHhhcCCCceeE-eeecccc
Q psy13372 173 RELRAHGISNVQL-QFDFFNA 192 (273)
Q Consensus 173 ~~~~~~~~~~~g~-~~D~~h~ 192 (273)
+.++ |+|-+ ++|....
T Consensus 241 ---~~fG-p~VNLgNI~~~eV 257 (276)
T 1u83_A 241 ---QKIG-PNVNLANIPFHDA 257 (276)
T ss_dssp ---HHHC-TTCCEEEEEGGGH
T ss_pred ---HHhC-CCccccCCCHHHH
Confidence 8987 77887 6776665
No 85
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=91.90 E-value=1.1 Score=37.26 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=55.8
Q ss_pred HHHHHHH-HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHH
Q psy13372 92 KTIQYAC-ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 92 ~~i~~a~-~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
+.++..+ .+|+..|+++.+..... + .-...+...+.|.++++.|.++|+.+.+..+... .....+...+
T Consensus 42 ~d~~~l~~~~G~N~vR~~~~~~~~~---~--~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~-----~~~~~~~~~~ 111 (291)
T 1egz_A 42 DTVASLKKDWKSSIVRAAMGVQESG---G--YLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHS-----AENNRSEAIR 111 (291)
T ss_dssp HHHHHHHHTTCCCEEEEEEECSSTT---S--TTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSC-----GGGGHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeccccccC---C--CcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCC-----cchhHHHHHH
Confidence 4555556 89999999976432111 0 1111235678899999999999999998875431 1223445555
Q ss_pred HHHHH-hhc-CCCceeEeeecccccc
Q psy13372 171 LIREL-RAH-GISNVQLQFDFFNAQR 194 (273)
Q Consensus 171 li~~~-~~~-~~~~~g~~~D~~h~~~ 194 (273)
+++.+ +.. ++|+| + +++.|-..
T Consensus 112 ~~~~ia~r~~~~p~V-~-~el~NEP~ 135 (291)
T 1egz_A 112 FFQEMARKYGNKPNV-I-YEIYNEPL 135 (291)
T ss_dssp HHHHHHHHHTTSTTE-E-EECCSCCC
T ss_pred HHHHHHHHhCCCCcE-E-EEecCCCC
Confidence 55222 223 45777 5 99987543
No 86
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=91.66 E-value=0.24 Score=40.46 Aligned_cols=79 Identities=13% Similarity=0.099 Sum_probs=48.6
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCC---------C---
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSR---------T--- 117 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~---------~--- 117 (273)
+.+.+.+++.|+.++.|-- +++ ..|+.|+++|+++|-+|+|...... +
T Consensus 114 ~~~i~~L~~~GIrVSLFID---------pd~-----------~qi~aA~~~GAd~IELhTG~YA~a~~~~~sn~~~~~~~ 173 (260)
T 3o6c_A 114 KQSIEKLQNANIEVSLFIN---------PSL-----------EDIEKSKILKAQFIELHTGHYANLHNALFSNISHTAFA 173 (260)
T ss_dssp HHHHHHHHHTTCEEEEEEC---------SCH-----------HHHHHHHHTTCSEEEECCHHHHHHHHHHHSSGGGSTTC
T ss_pred HHHHHHHHHCCCEEEEEeC---------CCH-----------HHHHHHHHhCCCEEEEechHhhhhhhcccccccccccc
Confidence 4555566667776665421 122 3688999999999999998542100 0
Q ss_pred ---CCCCC---cchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 118 ---QPIAS---EDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 118 ---~~~~~---~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
.+.+. +...+.-.+.+.+.+.+|.+.|+.+.
T Consensus 174 ~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL~Vn 210 (260)
T 3o6c_A 174 LKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVA 210 (260)
T ss_dssp CGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEe
Confidence 00001 11244456677888899999998875
No 87
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=91.39 E-value=2.1 Score=36.86 Aligned_cols=109 Identities=8% Similarity=-0.036 Sum_probs=70.2
Q ss_pred HHHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
..+-++.+.+.|.+.|-+..+.. .....+..+.++++|+.+....... ...+ .+++.+.++.+..+|
T Consensus 95 ~~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a-----~~~~-------~e~~~~ia~~~~~~G 162 (345)
T 1nvm_A 95 SVHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMDTVGFLMMS-----HMIP-------AEKLAEQGKLMESYG 162 (345)
T ss_dssp CHHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEEEEEST-----TSSC-------HHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeC-----CCCC-------HHHHHHHHHHHHHCC
Confidence 46778889999999998875432 1345777788899999887543211 1112 357778888888999
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+..|.+. +..+.. .+.....+++.+++-.+ -++.++++.|+.
T Consensus 163 a~~i~l~-DT~G~~------~P~~v~~lv~~l~~~~~----~~~pi~~H~Hn~ 204 (345)
T 1nvm_A 163 ATCIYMA-DSGGAM------SMNDIRDRMRAFKAVLK----PETQVGMHAHHN 204 (345)
T ss_dssp CSEEEEE-CTTCCC------CHHHHHHHHHHHHHHSC----TTSEEEEECBCT
T ss_pred CCEEEEC-CCcCcc------CHHHHHHHHHHHHHhcC----CCceEEEEECCC
Confidence 9998885 222222 33444444544443221 168999998764
No 88
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=91.27 E-value=6.7 Score=33.89 Aligned_cols=205 Identities=12% Similarity=0.003 Sum_probs=103.2
Q ss_pred HHHHHHHHcCCCeE-EecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCC-ch---hHHHHHHHHHHHHHHHHH
Q psy13372 25 DKYRVAAELGFRYI-ESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAV-KG---KESEFRASLEKTIQYACA 99 (273)
Q Consensus 25 ~~l~~~~~~G~~~v-El~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~i~~a~~ 99 (273)
+.++..+++|...| |.+...-..++..++++.++.|+.|++-..++-... ..+. .. ......+.+...+-.=-.
T Consensus 87 ~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG~y~~~~-~~p~~~~~~~~~~~~~e~l~~~~i~Ei~ 165 (360)
T 3tn4_A 87 EAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATGYYYEGE-GAPPYFQFRRLLGTAEDDIYDMFMAELT 165 (360)
T ss_dssp HHHHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEECCCCGGG-SCTHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCccccCcc-cCCcccchhhhcccCHHHHHHHHHHHHH
Confidence 34566788887776 665443248899999999999999987654321111 0000 00 011122222222211112
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
-|+.-..+-+|..+...+ ....-+.-.+.++..+..|++.|+.|.+++-. + ....+.++++ .+.+
T Consensus 166 ~Gi~~tgikaG~I~~~~~----~~~~t~~E~k~frA~a~aa~etG~Pv~iHt~~-----~---~~~~e~l~iL---~eeG 230 (360)
T 3tn4_A 166 EGIADTGIKAGVIKLASS----KGRITEYEKMFFRAAARAQKETGAVIITHTQE-----G---TMGPEQAAYL---LEHG 230 (360)
T ss_dssp TCSTTSCCCCSEEEEECB----TTBCCHHHHHHHHHHHHHHHHHCCEEEEECST-----T---CCHHHHHHHH---HHTT
T ss_pred hccccCCCcceEEEEEcc----CCCCCHHHHHHHHHHHHHHHHhCCcEEEEcCc-----c---cCCHHHHHHH---HHcC
Confidence 233221111221100000 01111233467899999999999999999732 1 1223445666 5544
Q ss_pred CC--ceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHH--HHHHHHHHcCCCceEEEeee
Q psy13372 180 IS--NVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYA--YVFELLAREGYEGYVGLEYK 253 (273)
Q Consensus 180 ~~--~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~--~i~~~L~~~gy~g~~~lE~~ 253 (273)
-+ .+.+ +|+... .|+ +..+++.++=.++-+.-. +....-. -..|.. ..+..|.+.||...+.+|..
T Consensus 231 ~~~~~vvi----~H~~~~-~d~-~~~~~~l~~G~yl~fD~i-G~~~~~~-~p~d~~r~~~l~~lv~~g~~drILLstD 300 (360)
T 3tn4_A 231 ADPKKIVI----GHMCDN-TDP-DYHRKTLAYGVYIAFDRF-GIQGMVG-APTDEERVRTLLALLRDGYEKQIMLSHD 300 (360)
T ss_dssp CCGGGEEE----CCGGGC-CCH-HHHHHHHTTTCEEEECCT-TCCCSTT-CCCHHHHHHHHHHHHHTTCGGGEEECCC
T ss_pred CCCCceEE----EcCCCC-CCH-HHHHHHHHcCCEEEEccc-ccccccC-CCChHHHHHHHHHHHHhcCcceEEEecC
Confidence 32 2332 454332 343 445555555455555432 1110001 112333 44677888999999999865
No 89
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=91.27 E-value=3.5 Score=37.00 Aligned_cols=105 Identities=10% Similarity=-0.002 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeE-EEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 24 LDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQV-LINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+..++.+.+.|.+.|.+.... +........+.++++|+.+. .++...+ . +- ..+++.+.++.+..+|
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~----~---~~----~~e~~~~~a~~l~~~G 171 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTS----P---VH----NLQTWVDVAQQLAELG 171 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCC----T---TC----CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeC----C---CC----CHHHHHHHHHHHHHCC
Confidence 566888999999999987652 22345666777889999875 3332211 1 11 1467788888889999
Q ss_pred CCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 102 IPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 102 ~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+..|.+. .|.. .+.....+++.+++- .++.|.++.|+.
T Consensus 172 ad~I~l~DT~G~~---------~P~~v~~lv~~l~~~------~~~~i~~H~Hnd 211 (464)
T 2nx9_A 172 VDSIALKDMAGIL---------TPYAAEELVSTLKKQ------VDVELHLHCHST 211 (464)
T ss_dssp CSEEEEEETTSCC---------CHHHHHHHHHHHHHH------CCSCEEEEECCT
T ss_pred CCEEEEcCCCCCc---------CHHHHHHHHHHHHHh------cCCeEEEEECCC
Confidence 9999885 3332 344455555555442 268899998754
No 90
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=91.25 E-value=2.3 Score=34.58 Aligned_cols=136 Identities=6% Similarity=-0.103 Sum_probs=73.3
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.++.+++.|.+.+=...... .+.+.+.++.++++--..+++.... . .++..+..++.+++.++
T Consensus 19 ~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~l~~~~~~i~~~~G~hP~----~--~~~~~~~~~~~l~~~~~----- 86 (264)
T 1xwy_A 19 KDRDDVVACAFDAGVNGLLITGTNL-RESQQAQKLARQYSSCWSTAGVHPH----D--SSQWQAATEEAIIELAA----- 86 (264)
T ss_dssp TTHHHHHHHHHHTTCCEEEECCCSH-HHHHHHHHHHHHSTTEEEEECCCGG----G--GGGCCHHHHHHHHHHHT-----
T ss_pred cCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHHHHHhCCCEEEEEEECCc----c--cccCCHHHHHHHHHHhc-----
Confidence 3789999999999999854433221 3456677777887632223332110 1 01111223444444432
Q ss_pred CCCeEEec-CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 101 NIPAIHIM-SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 101 G~~~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
..+.+.+. .|-. ..+ .....+...+.+++..++|+++|+.+.+++. ...++..+++ ++.+
T Consensus 87 ~~~~~~iGE~Gld-~~~-----~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~----------~a~~~~~~il---~~~~ 147 (264)
T 1xwy_A 87 QPEVVAIGECGLD-FNR-----NFSTPEEQERAFVAQLRIAADLNMPVFMHCR----------DAHERFMTLL---EPWL 147 (264)
T ss_dssp STTEEEEEEEEEE-TTT-----CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE----------SCHHHHHHHH---GGGG
T ss_pred CCCeEEEEEeccC-CCC-----CCCcHHHHHHHHHHHHHHHHHhCCcEEEEcC----------CchHHHHHHH---HhcC
Confidence 11222221 1111 110 0112344457788999999999999999872 1356677888 7764
Q ss_pred CCceeEee
Q psy13372 180 ISNVQLQF 187 (273)
Q Consensus 180 ~~~~g~~~ 187 (273)
.+..++.+
T Consensus 148 ~~~~~~v~ 155 (264)
T 1xwy_A 148 DKLPGAVL 155 (264)
T ss_dssp GGSSCEEE
T ss_pred CCCCcEEE
Confidence 33455544
No 91
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=91.20 E-value=5.4 Score=32.66 Aligned_cols=124 Identities=14% Similarity=0.050 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC--C--CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP--V--GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~--~--~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
++++ +..+.+.|.+.||+.... + --+...++...+..++.+..+--|-++++.. ++. -++.+++-|+.+
T Consensus 10 s~~~-a~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Y--s~~----E~~~M~~Di~~~ 82 (256)
T 1twd_A 10 SMEC-ALTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCY--SDG----EFAAILEDVRTV 82 (256)
T ss_dssp SHHH-HHHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCC--CHH----HHHHHHHHHHHH
T ss_pred CHHH-HHHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcC--CHH----HHHHHHHHHHHH
Confidence 4444 455668899999999652 1 1345677777777778877654443334322 222 256788899999
Q ss_pred HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 98 CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 98 ~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
+++|+.-+++ |....+-. -. .+.+++|.+.|. |+.+.++- ....+.++.++++-+
T Consensus 83 ~~~GadGvV~--G~Lt~dg~------iD----~~~~~~Li~~a~--~~~vTFHR------AfD~~~d~~~ale~L 137 (256)
T 1twd_A 83 RELGFPGLVT--GVLDVDGN------VD----MPRMEKIMAAAG--PLAVTFHR------AFDMCANPLYTLNNL 137 (256)
T ss_dssp HHTTCSEEEE--CCBCTTSS------BC----HHHHHHHHHHHT--TSEEEECG------GGGGCSCHHHHHHHH
T ss_pred HHcCCCEEEE--eeECCCCC------cC----HHHHHHHHHHhC--CCcEEEEC------chhccCCHHHHHHHH
Confidence 9999999998 44433210 11 344566666665 45555542 111356666666666
No 92
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=91.02 E-value=2 Score=35.87 Aligned_cols=133 Identities=13% Similarity=0.011 Sum_probs=84.9
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.+++.||.+|=+. | ..++..++.++..++.+.++..| ..|..+ . +.-..-++.|-+.
T Consensus 74 ~dI~~lc~eA~~~g~aaVCV~-P---~~V~~a~~~L~~s~V~V~tVigF---P~G~~~-~-------~~Kv~Ea~~Ai~~ 138 (288)
T 3oa3_A 74 SQIDVLCAEAKEYGFATVCVR-P---DYVSRAVQYLQGTQVGVTCVIGF---HEGTYS-T-------DQKVSEAKRAMQN 138 (288)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-G---GGHHHHHHHTTTSSCEEEEEEST---TTSCSC-H-------HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCcEEEEC-H---HHHHHHHHHcCCCCCeEEEEeCC---CCCCCc-H-------HHHHHHHHHHHHc
Confidence 356777888899999999886 3 35677778888888998865332 122211 1 1123345667779
Q ss_pred CCCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
||.-|-++ .|.. ....++.+.+-++.+.+.+....+++.||+. ++ +.++..+.++-..+.
T Consensus 139 GAdEIDmVINig~l---------k~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~--------~L-t~eei~~A~~ia~ea 200 (288)
T 3oa3_A 139 GASELDMVMNYPWL---------SEKRYTDVFQDIRAVRLAAKDAILKVILETS--------QL-TADEIIAGCVLSSLA 200 (288)
T ss_dssp TCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHTTTSEEEEECCGG--------GC-CHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeehhhh---------cCCcHHHHHHHHHHHHHHhcCCCceEEEECC--------CC-CHHHHHHHHHHHHHc
Confidence 99988654 3333 2234677888888888888776689999982 23 344544444222566
Q ss_pred CCCceeEe
Q psy13372 179 GISNVQLQ 186 (273)
Q Consensus 179 ~~~~~g~~ 186 (273)
+...++..
T Consensus 201 GADfVKTS 208 (288)
T 3oa3_A 201 GADYVKTS 208 (288)
T ss_dssp TCSEEECC
T ss_pred CCCEEEcC
Confidence 66666665
No 93
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=90.92 E-value=1.9 Score=36.13 Aligned_cols=87 Identities=13% Similarity=0.065 Sum_probs=53.9
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHH-
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIREL- 175 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~- 175 (273)
++.+|+..|+++.+...... . ... ...+.|.++++.|.++|+.+.|+.|... .+......+.+.++.+++
T Consensus 53 ~~~~G~N~VRip~~~~~~~~---~-~~~---~~~~~ld~~v~~a~~~Gi~Vild~H~~~--~~~~~~~~~~~~~~w~~ia 123 (303)
T 7a3h_A 53 RDDWGINVFRAAMYTSSGGY---I-DDP---SVKEKVKEAVEAAIDLDIYVIIDWHILS--DNDPNIYKEEAKDFFDEMS 123 (303)
T ss_dssp HHHTCCCEEEEEEESSTTST---T-TCT---THHHHHHHHHHHHHHHTCEEEEEEECSS--SCSTTTTHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEEEeCCCCc---c-CCH---HHHHHHHHHHHHHHHCCCEEEEEecccC--CCCchHHHHHHHHHHHHHH
Confidence 35799999999765321110 0 111 2567899999999999999999987542 112223455566665332
Q ss_pred hhc-CCCceeEeeecccccc
Q psy13372 176 RAH-GISNVQLQFDFFNAQR 194 (273)
Q Consensus 176 ~~~-~~~~~g~~~D~~h~~~ 194 (273)
+.. ++|+| + +|+.|-..
T Consensus 124 ~r~~~~~~V-i-~el~NEP~ 141 (303)
T 7a3h_A 124 ELYGDYPNV-I-YEIANEPN 141 (303)
T ss_dssp HHHTTCTTE-E-EECCSCCC
T ss_pred HHhCCCCeE-E-EEeccCCC
Confidence 222 55776 4 99987543
No 94
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=90.80 E-value=3 Score=33.84 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=81.9
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.+++.||.+|=++ | ..++..++.++..++.+.++..| ..|..+ .+ .-..-++.|-+.
T Consensus 43 ~~i~~lc~eA~~~~~~aVcV~-p---~~v~~a~~~L~~s~v~v~tVigF---P~G~~~-~~-------~Kv~Ea~~Ai~~ 107 (239)
T 3ngj_A 43 EQIRKLCSEAAEYKFASVCVN-P---TWVPLCAELLKGTGVKVCTVIGF---PLGATP-SE-------VKAYETKVAVEQ 107 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-G---GGHHHHHHHHTTSSCEEEEEEST---TTCCSC-HH-------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCcEEEEC-H---HHHHHHHHHhCCCCCeEEEEecc---CCCCCc-hH-------HHHHHHHHHHHc
Confidence 356777889999999999885 2 34677778888888888865322 122211 11 112344556668
Q ss_pred CCCeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
||.-|-++. |.. .+..|+.+.+-++.+.+.+...-+++.||+. ++ +.++..+.++-..+.
T Consensus 108 GAdEIDmViNig~l---------k~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~--------~L-t~eei~~a~~ia~~a 169 (239)
T 3ngj_A 108 GAEEVDMVINIGMV---------KAKKYDDVEKDVKAVVDASGKALTKVIIECC--------YL-TNEEKVEVCKRCVAA 169 (239)
T ss_dssp TCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHHTTSEEEEECCGG--------GS-CHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeehHHh---------ccccHHHHHHHHHHHHHHhcCCceEEEEecC--------CC-CHHHHHHHHHHHHHH
Confidence 999886653 322 2234667778888888888765578888972 23 455555555222455
Q ss_pred CCCceeEe
Q psy13372 179 GISNVQLQ 186 (273)
Q Consensus 179 ~~~~~g~~ 186 (273)
+...++..
T Consensus 170 GADfVKTS 177 (239)
T 3ngj_A 170 GAEYVKTS 177 (239)
T ss_dssp TCSEEECC
T ss_pred CcCEEECC
Confidence 54544443
No 95
>7odc_A Protein (ornithine decarboxylase); pyridoxal-5'-phosphate, PLP, group IV decarboxylase, polyami parasitical, chemotherapy target, putrescine; HET: PLP; 1.60A {Mus musculus} SCOP: b.49.2.3 c.1.6.1 PDB: 2on3_A 1d7k_A*
Probab=90.77 E-value=3.7 Score=36.32 Aligned_cols=93 Identities=10% Similarity=0.108 Sum_probs=59.8
Q ss_pred HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchHHH
Q psy13372 51 QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPYTT 128 (273)
Q Consensus 51 ~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~~ 128 (273)
++.+.+++.+|.+..+++..+.. . .+++.....++.+++.++.+.++|.+ .+.+..| ++...+ ..-.++.
T Consensus 179 ~~~~~~~~~~l~l~Glh~H~gsq--~-~d~~~~~~a~~~~~~~~~~~~~~G~~~~~ldiGGG-~~~~~~----~~~~~~~ 250 (424)
T 7odc_A 179 LLLERAKELNIDVIGVSFHVGSG--C-TDPDTFVQAVSDARCVFDMATEVGFSMHLLDIGGG-FPGSED----TKLKFEE 250 (424)
T ss_dssp HHHHHHHHTTCEEEEEECCCCSS--C-CCTHHHHHHHHHHHHHHHHHHHHTCCCCEEECCCC-CCCSSS----SSSCHHH
T ss_pred HHHHHHHhCCCCEEEEEEECCCC--C-CCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeCCC-cCCCCC----CCCCHHH
Confidence 33444556799999888765421 1 35666667778888888888888754 5666533 433211 2235777
Q ss_pred HHHHHHHHHHHH-h-hCCcEEEEcc
Q psy13372 129 LKENLIYACAEL-E-RHSLTALIEP 151 (273)
Q Consensus 129 ~~~~l~~l~~~a-~-~~gv~i~lE~ 151 (273)
+.+.+++.++.. . ..+++|.+||
T Consensus 251 ~a~~i~~~~~~~~~~~~~~~ii~EP 275 (424)
T 7odc_A 251 ITSVINPALDKYFPSDSGVRIIAEP 275 (424)
T ss_dssp HHHHHHHHHHHHSCGGGTCEEEECC
T ss_pred HHHHHHHHHHHHhcccCCcEEEECC
Confidence 788777766533 2 4589999998
No 96
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=90.66 E-value=4.2 Score=32.61 Aligned_cols=119 Identities=14% Similarity=0.054 Sum_probs=71.4
Q ss_pred HHHHHcCCCeEEecCCC--CC--CCHHHHHHHH---HHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 28 RVAAELGFRYIESWFPP--VG--VTLEQLVAAQ---TRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 28 ~~~~~~G~~~vEl~~~~--~~--~~~~~~~~~l---~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
..+.+.|.+.||+.... +. -+...++... +..++.+..+--|-++++.. ++. -++.+++-|+.++++
T Consensus 15 ~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~~~~ipV~vMIRPR~GdF~Y--s~~----E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 15 TRLDKAIISRVELCDNLAVGGTTPSYGVIKEANQYLHEKGISVAVMIRPRGGNFVY--NDL----ELRIMEEDILRAVEL 88 (224)
T ss_dssp GGCCTTTCCEEEEEBCGGGTCBCCCHHHHHHHHHHHHHTTCEEEEECCSSSSCSCC--CHH----HHHHHHHHHHHHHHT
T ss_pred HHHHHcCCCEEEEcCCcccCCcCCCHHHHHHHHHhhhhcCCceEEEECCCCCCCcC--CHH----HHHHHHHHHHHHHHc
Confidence 34568899999999652 11 2345555555 77788877654443334322 222 256788899999999
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc--CCHHHHHHHH
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL--SSFRVAERLI 172 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~--~~~~~~~~li 172 (273)
|+.-+++ |....+- .-. .+.+++|.+.|. |+.+.++- - ...+ .++.++++-+
T Consensus 89 GadGvV~--G~Lt~dg------~iD----~~~~~~Li~~a~--~~~vTFHR--A----FD~~~~~d~~~ale~L 142 (224)
T 2bdq_A 89 ESDALVL--GILTSNN------HID----TEAIEQLLPATQ--GLPLVFHM--A----FDVIPKSDQKKSIDQL 142 (224)
T ss_dssp TCSEEEE--CCBCTTS------SBC----HHHHHHHHHHHT--TCCEEECG--G----GGGSCTTTHHHHHHHH
T ss_pred CCCEEEE--eeECCCC------CcC----HHHHHHHHHHhC--CCeEEEEC--c----hhccCCcCHHHHHHHH
Confidence 9999998 4443321 011 345667777666 44444442 1 1124 6667776666
No 97
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=90.39 E-value=4.1 Score=32.76 Aligned_cols=113 Identities=12% Similarity=-0.028 Sum_probs=64.5
Q ss_pred CCCCcccccccccccccccccCHHHHHHHHHHcCCCeEEecCC---C--C-CCCHHHHHHHHHHcCCeeEEEecCCcccc
Q psy13372 1 MAAPSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFP---P--V-GVTLEQLVAAQTRHGLKQVLINTEVDENF 74 (273)
Q Consensus 1 ~~~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~---~--~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~ 74 (273)
|.++| +++-+. +...-. ++.+.++.+.+.|.+.+++..- + . ....+.++++.+..++.+..+-.
T Consensus 1 ~~~~~-~i~psi-la~D~~--~l~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~~~~~~vhlm------ 70 (230)
T 1tqj_A 1 MSKNI-VVAPSI-LSADFS--RLGEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLTKKTLDVHLM------ 70 (230)
T ss_dssp --CCC-EEEEBG-GGSCGG--GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGCCSEEEEEEE------
T ss_pred CCCCc-EEEEEe-eecCHh--HHHHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhcCCcEEEEEE------
Confidence 44443 665544 232323 7899999999999999998842 1 1 13344555444333444443322
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 75 GYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
. .+| .+.++.+...|+..+++|......+ ...++++..+++|+.+++--
T Consensus 71 -v-~dp----------~~~i~~~~~aGadgv~vh~e~~~~~----------------~~~~~~~~i~~~g~~~gv~~ 119 (230)
T 1tqj_A 71 -I-VEP----------EKYVEDFAKAGADIISVHVEHNASP----------------HLHRTLCQIRELGKKAGAVL 119 (230)
T ss_dssp -S-SSG----------GGTHHHHHHHTCSEEEEECSTTTCT----------------THHHHHHHHHHTTCEEEEEE
T ss_pred -c-cCH----------HHHHHHHHHcCCCEEEECcccccch----------------hHHHHHHHHHHcCCcEEEEE
Confidence 1 234 2356778888999999985311111 12345566677888766654
No 98
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=90.35 E-value=4.1 Score=33.46 Aligned_cols=133 Identities=13% Similarity=0.092 Sum_probs=83.7
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.+++.||.+|=++ | ..++..++.++..++.+.++..+ ..|..+ .+ .-..-++.|-+.
T Consensus 59 ~~I~~lc~eA~~~~~aaVCV~-p---~~V~~a~~~L~gs~v~v~tVigF---P~G~~~-~~-------~Kv~Ea~~Ai~~ 123 (260)
T 3r12_A 59 DDIKKLCLEARENRFHGVCVN-P---CYVKLAREELEGTDVKVVTVVGF---PLGANE-TR-------TKAHEAIFAVES 123 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC-G---GGHHHHHHHHTTSCCEEEEEEST---TTCCSC-HH-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcEEEEC-H---HHHHHHHHHhcCCCCeEEEEecC---CCCCCc-HH-------HHHHHHHHHHHc
Confidence 356777889999999999885 2 34667778888888888875422 222211 11 112345556678
Q ss_pred CCCeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
||.-|-++. |.. ....|+.+.+-++.+.+.+...-+++.||+. ++ +.++..+.++-..+.
T Consensus 124 GAdEIDmViNig~l---------k~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~--------~L-t~eei~~A~~ia~ea 185 (260)
T 3r12_A 124 GADEIDMVINVGML---------KAKEWEYVYEDIRSVVESVKGKVVKVIIETC--------YL-DTEEKIAACVISKLA 185 (260)
T ss_dssp TCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHTTTSEEEEECCGG--------GC-CHHHHHHHHHHHHHT
T ss_pred CCCEEEEEeehhhh---------ccccHHHHHHHHHHHHHhcCCCcEEEEEeCC--------CC-CHHHHHHHHHHHHHh
Confidence 999875543 333 2234777888888888887655578899982 23 445555555222566
Q ss_pred CCCceeEe
Q psy13372 179 GISNVQLQ 186 (273)
Q Consensus 179 ~~~~~g~~ 186 (273)
+...++..
T Consensus 186 GADfVKTS 193 (260)
T 3r12_A 186 GAHFVKTS 193 (260)
T ss_dssp TCSEEECC
T ss_pred CcCEEEcC
Confidence 65666655
No 99
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=89.55 E-value=3.8 Score=33.47 Aligned_cols=188 Identities=11% Similarity=0.032 Sum_probs=98.9
Q ss_pred CHHHHHHHHHHcCCCeEEecC------CCCCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF------PPVGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~------~~~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
.+.+.++.+.+.|.+.+.+.. |.-....+.++++.+.. .+.+..+-.. .+|+ +.+
T Consensus 41 ~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p~~~ldvHLmv--------~~p~----------~~i 102 (246)
T 3inp_A 41 RLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMV--------KPVD----------ALI 102 (246)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTCCSCEEEEEEC--------SSCH----------HHH
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCCCCeEEEEEee--------CCHH----------HHH
Confidence 689999999999999887763 21113455555544444 5665554331 2332 356
Q ss_pred HHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHH
Q psy13372 95 QYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRE 174 (273)
Q Consensus 95 ~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~ 174 (273)
+.+...|+..|++|.- .. + .+.+.++.++++|+++++-- + |.+ +.+.+..++
T Consensus 103 ~~~~~aGAd~itvH~E---a~-------~--------~~~~~i~~ir~~G~k~Gval-n----p~T---p~e~l~~~l-- 154 (246)
T 3inp_A 103 ESFAKAGATSIVFHPE---AS-------E--------HIDRSLQLIKSFGIQAGLAL-N----PAT---GIDCLKYVE-- 154 (246)
T ss_dssp HHHHHHTCSEEEECGG---GC-------S--------CHHHHHHHHHTTTSEEEEEE-C----TTC---CSGGGTTTG--
T ss_pred HHHHHcCCCEEEEccc---cc-------h--------hHHHHHHHHHHcCCeEEEEe-c----CCC---CHHHHHHHH--
Confidence 6677899999999841 11 0 24556677788999888764 2 222 122333455
Q ss_pred HhhcCCCcee-Eeeecccc-cccCCChHHHHHhcCCccee----EEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceE
Q psy13372 175 LRAHGISNVQ-LQFDFFNA-QRICGDLTHTFGACRDLIGH----VQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYV 248 (273)
Q Consensus 175 ~~~~~~~~~g-~~~D~~h~-~~~~~~~~~~i~~~~~~i~~----vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~ 248 (273)
+.++ .+- .+.+.|-- +.-.....+-++++...+.. +.+. -+ |-|+.. -.+.+.+.|-+..+
T Consensus 155 -~~vD--~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~--------VD-GGI~~~-ti~~~~~aGAD~~V 221 (246)
T 3inp_A 155 -SNID--RVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLE--------ID-GGVNPY-NIAEIAVCGVNAFV 221 (246)
T ss_dssp -GGCS--EEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEE--------EE-SSCCTT-THHHHHTTTCCEEE
T ss_pred -hcCC--EEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEE--------EE-CCcCHH-HHHHHHHcCCCEEE
Confidence 4432 211 12233211 00011222334443333211 1111 01 556643 35667788877544
Q ss_pred EE-eeecCCChHHHHHHHHHhh
Q psy13372 249 GL-EYKPQGNTKEGLEEFLKTF 269 (273)
Q Consensus 249 ~l-E~~~~~~~~~~~~~~~~~~ 269 (273)
+- -++...++.+.++ .+|+.
T Consensus 222 ~GSaIf~a~dp~~~i~-~l~~~ 242 (246)
T 3inp_A 222 AGSAIFNSDSYKQTID-KMRDE 242 (246)
T ss_dssp ESHHHHTSSCHHHHHH-HHHHH
T ss_pred EehHHhCCCCHHHHHH-HHHHH
Confidence 43 2344567888777 66653
No 100
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=89.26 E-value=3 Score=35.42 Aligned_cols=87 Identities=10% Similarity=0.135 Sum_probs=0.0
Q ss_pred HHHHHHH-HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHH
Q psy13372 91 EKTIQYA-CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 91 ~~~i~~a-~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
++.++.. +.+|+..|+++.+....... ..... .+.+.++++.|.++|+.+.|+.+... .+......+...
T Consensus 71 ~~~~~~l~~~~G~N~VRi~~~~~~~~~~----~~~~~---~~~ld~~v~~a~~~Gi~VilD~H~~~--~~~~~~~~~~~~ 141 (327)
T 3pzt_A 71 KDSLKWLRDDWGITVFRAAMYTADGGYI----DNPSV---KNKVKEAVEAAKELGIYVIIDWHILN--DGNPNQNKEKAK 141 (327)
T ss_dssp HHHHHHHHHHTCCSEEEEEEESSTTSTT----TCGGG---HHHHHHHHHHHHHHTCEEEEEEECSS--SCSTTTTHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEeEECCCCcc----cCHHH---HHHHHHHHHHHHHCCCEEEEEeccCC--CCCchHHHHHHH
Q ss_pred HHHHHHhhc-----CCCceeEeeeccc
Q psy13372 170 RLIRELRAH-----GISNVQLQFDFFN 191 (273)
Q Consensus 170 ~li~~~~~~-----~~~~~g~~~D~~h 191 (273)
++. +.+ ++|+| + ++++|
T Consensus 142 ~~w---~~~a~r~k~~p~V-i-~el~N 163 (327)
T 3pzt_A 142 EFF---KEMSSLYGNTPNV-I-YEIAN 163 (327)
T ss_dssp HHH---HHHHHHHTTCTTE-E-EECCS
T ss_pred HHH---HHHHHHhCCCCcE-E-EEecc
No 101
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=89.17 E-value=8.5 Score=31.81 Aligned_cols=89 Identities=17% Similarity=0.131 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc-cCCHHHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY-LSSFRVAE 169 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~-~~~~~~~~ 169 (273)
++.++..+.+|+..|+++.+.. ..+ .+. ..+.+.++++.|.++|+.+.|+.|... +.. ..+.+...
T Consensus 34 ~~~~~~i~~~G~N~VRi~~~~~-~~~-----~~~----~~~~ld~~v~~a~~~Gi~Vild~H~~~---~~~~~~~~~~~~ 100 (294)
T 2whl_A 34 STAIPAIAEQGANTIRIVLSDG-GQW-----EKD----DIDTIREVIELAEQNKMVAVVEVHDAT---GRDSRSDLNRAV 100 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEECCS-SSS-----CCC----CHHHHHHHHHHHHTTTCEEEEEECTTT---TCCCHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCC-Ccc-----Ccc----HHHHHHHHHHHHHHCCCEEEEEeccCC---CCCcchhHHHHH
Confidence 4567777889999999975421 111 111 356788999999999999999986532 111 12344555
Q ss_pred HHHHHH-hhc-CC-CceeEeeecccccc
Q psy13372 170 RLIREL-RAH-GI-SNVQLQFDFFNAQR 194 (273)
Q Consensus 170 ~li~~~-~~~-~~-~~~g~~~D~~h~~~ 194 (273)
++.+++ +.. ++ +.| .+++.|-..
T Consensus 101 ~~w~~ia~~y~~~~~~v--~~el~NEP~ 126 (294)
T 2whl_A 101 DYWIEMKDALIGKEDTV--IINIANEWY 126 (294)
T ss_dssp HHHHHTHHHHTTCTTTE--EEECCTTCC
T ss_pred HHHHHHHHHHcCCCCeE--EEEecCCCC
Confidence 555222 333 34 556 479887643
No 102
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=88.99 E-value=7.3 Score=35.60 Aligned_cols=108 Identities=9% Similarity=-0.038 Sum_probs=70.1
Q ss_pred HHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 23 YLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+..++.+.+.|.+.|-+...- +........+.++++|+.+.. ++.. + +... ..+++.+.++.+..+
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~-~---~~~~-------~~e~~~~~a~~l~~~ 187 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYT-I---SPVH-------TVEGYVKLAGQLLDM 187 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECC-C---STTC-------CHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEee-e---CCCC-------CHHHHHHHHHHHHHc
Confidence 4666889999999999987652 223356666778899998753 3221 1 1111 146777888888889
Q ss_pred CCCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 101 NIPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 101 G~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
|+..|.+. .|.. .+.....+++.+++-.+ -++.|.++.|+.
T Consensus 188 Gad~I~L~DT~G~~---------~P~~v~~lv~~l~~~~p----~~i~I~~H~Hnd 230 (539)
T 1rqb_A 188 GADSIALKDMAALL---------KPQPAYDIIKAIKDTYG----QKTQINLHCHST 230 (539)
T ss_dssp TCSEEEEEETTCCC---------CHHHHHHHHHHHHHHHC----TTCCEEEEEBCT
T ss_pred CCCEEEeCCCCCCc---------CHHHHHHHHHHHHHhcC----CCceEEEEeCCC
Confidence 99999885 2332 34455566666655332 258888888754
No 103
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=88.93 E-value=2.8 Score=34.77 Aligned_cols=92 Identities=14% Similarity=0.157 Sum_probs=55.9
Q ss_pred HHHHHHH-HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHH
Q psy13372 92 KTIQYAC-ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 92 ~~i~~a~-~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
+.++..+ .+|+..|+++.+..+.. . +. .....+...+.|.++++.|.++|+.+.|..|... + ....+...+
T Consensus 42 ~di~~~~~~~G~N~vRi~~~~~~~~-~-~~-~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~---~--~~~~~~~~~ 113 (293)
T 1tvn_A 42 ETVAKAKTEFNATLIRAAIGHGTST-G-GS-LNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHE---A--HTDQATAVR 113 (293)
T ss_dssp HHHHHHHHHHCCSEEEEEEECCTTS-T-TS-TTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSC---G--GGCHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccccCCC-C-Cc-cccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCC---c--cccHHHHHH
Confidence 3455556 59999999975431110 0 00 1001145678899999999999999999886532 1 123455566
Q ss_pred HHHHH-hhc-CCCceeEeeeccccc
Q psy13372 171 LIREL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 171 li~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
+.+.+ +.. ++|+| + +++.|-.
T Consensus 114 ~~~~~a~r~~~~p~V-~-~el~NEP 136 (293)
T 1tvn_A 114 FFEDVATKYGQYDNV-I-YEIYNEP 136 (293)
T ss_dssp HHHHHHHHHTTCTTE-E-EECCSCC
T ss_pred HHHHHHHHhCCCCeE-E-EEccCCC
Confidence 66332 222 45777 5 9998754
No 104
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=88.81 E-value=11 Score=32.40 Aligned_cols=89 Identities=16% Similarity=0.089 Sum_probs=54.8
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
+.++..+.+|+..|++..... ... .+. ..+.|.++++.|.++|+.+.|+.+... ...-..+.+.+.++
T Consensus 58 ~~i~~lk~~G~N~VRip~~~~-~~~-----~~~----~l~~ld~~v~~a~~~GiyVIlDlH~~~--g~~~~~~~~~~~~~ 125 (345)
T 3jug_A 58 TAIPAIAEQGANTIRIVLSDG-GQW-----EKD----DIDTVREVIELAEQNKMVAVVEVHDAT--GRDSRSDLDRAVDY 125 (345)
T ss_dssp HHHHHHHHTTCSEEEEEECCS-SSS-----CCC----CHHHHHHHHHHHHTTTCEEEEEECTTT--TCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEecCC-Ccc-----CHH----HHHHHHHHHHHHHHCCCEEEEEeccCC--CCCcHHHHHHHHHH
Confidence 567778899999999965311 111 111 366788999999999999999987642 11111123445544
Q ss_pred HHHH-hhc-CC-CceeEeeecccccc
Q psy13372 172 IREL-RAH-GI-SNVQLQFDFFNAQR 194 (273)
Q Consensus 172 i~~~-~~~-~~-~~~g~~~D~~h~~~ 194 (273)
.+++ +.. +. ++| .||+.|-..
T Consensus 126 w~~iA~ryk~~~~~V--i~el~NEP~ 149 (345)
T 3jug_A 126 WIEMKDALIGKEDTV--IINIANEWY 149 (345)
T ss_dssp HHHTHHHHTTCTTTE--EEECCTTCC
T ss_pred HHHHHHHHcCCCCeE--EEEecCCCC
Confidence 4221 333 34 556 499988654
No 105
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=88.59 E-value=3.6 Score=33.21 Aligned_cols=132 Identities=16% Similarity=0.153 Sum_probs=81.8
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.++++||.+|=++ | ..++..+ .++..++.+.++..| ..|..+ .+ .-..-++.|-+.
T Consensus 29 ~~i~~lc~eA~~~~~~aVcV~-p---~~v~~a~-~l~~~~v~v~tVigF---P~G~~~-~~-------~K~~E~~~Ai~~ 92 (231)
T 3ndo_A 29 SDVTALVDEAADLGVFAVCVS-P---PLVSVAA-GVAPSGLAIAAVAGF---PSGKHV-PG-------IKATEAELAVAA 92 (231)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-G---GGHHHHH-HHCCTTCEEEEEEST---TTCCSC-HH-------HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCcEEEEC-H---HHHHHHH-HhcCCCCeEEEEecC---CCCCCc-HH-------HHHHHHHHHHHc
Confidence 356777889999999999885 2 3355556 777778888875322 122211 11 112345566778
Q ss_pred CCCeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc---CCHHHHHHHHHHH
Q psy13372 101 NIPAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL---SSFRVAERLIREL 175 (273)
Q Consensus 101 G~~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~---~~~~~~~~li~~~ 175 (273)
||.-|-++. |.. ....|+.+.+-++.+.+.+...-+++.||+. ++ .|.++..+.++-.
T Consensus 93 GAdEIDmVinig~l---------k~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~--------~L~~~~t~eei~~a~~ia 155 (231)
T 3ndo_A 93 GATEIDMVIDVGAA---------LAGDLDAVSADITAVRKAVRAATLKVIVESA--------ALLEFSGEPLLADVCRVA 155 (231)
T ss_dssp TCSEEEEECCHHHH---------HTTCHHHHHHHHHHHHHHTTTSEEEEECCHH--------HHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEEeehHhh---------hcccHHHHHHHHHHHHHHccCCceEEEEECc--------ccCCCCCHHHHHHHHHHH
Confidence 999876543 332 1234777888888888888755678999982 34 3566666555222
Q ss_pred hhcCCCceeE
Q psy13372 176 RAHGISNVQL 185 (273)
Q Consensus 176 ~~~~~~~~g~ 185 (273)
.+.+...++.
T Consensus 156 ~~aGADfVKT 165 (231)
T 3ndo_A 156 RDAGADFVKT 165 (231)
T ss_dssp HHTTCSEEEC
T ss_pred HHHCcCEEEc
Confidence 5555554544
No 106
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=88.55 E-value=9.4 Score=31.59 Aligned_cols=188 Identities=10% Similarity=-0.071 Sum_probs=99.5
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.+.++.++.++++|.+.+=+..+. ...+.+.+.+++++++=.+..+.. ..+ ... .+.+++ ..+
T Consensus 53 ~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~~~-------v~P--~~~---~~eL~~----l~~ 116 (294)
T 4i6k_A 53 ATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGIAV-------VQH--TTT---FNELVN----LKA 116 (294)
T ss_dssp BCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEEEC-------CCT--TCC---HHHHHH----HHT
T ss_pred CCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEEEE-------eCC--ccc---HHHHHH----HHH
Confidence 489999999999999987665431 124456677778888544444322 111 111 123333 234
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
.|+.-|++.+...+. ... + .+.+.++.+.|+++|+.+.++.- .....++.+++ ++.
T Consensus 117 ~gv~Gi~l~~~~~~~-------~~~--~--~~~~~~~~~~a~~~glpv~iH~~---------~~~l~~~~~~l---~~~- 172 (294)
T 4i6k_A 117 QGIVGVRLNLFGLNL-------PAL--N--TPDWQKFLRNVESLNWQVELHAP---------PKYLVQLLPQL---NEY- 172 (294)
T ss_dssp TTEEEEEEECTTSCC-------CCS--S--SHHHHHHHHHHHHTTCEEEEECC---------HHHHHHHHHHH---TTS-
T ss_pred CCCcEEEeccCCCCC-------CCc--c--cHHHHHHHHHHHHcCCEEEEeeC---------cchHHHHHHHH---HHC-
Confidence 588888876532111 011 1 15677888999999999999862 11234566666 665
Q ss_pred CCceeEeeecccccc-c-CCC--hHHHHHhcCCcceeEEeccCCCCCCCCCCC---cccHHHHHHHHHHcCCCceEEEee
Q psy13372 180 ISNVQLQFDFFNAQR-I-CGD--LTHTFGACRDLIGHVQIAQAPDRQEPHARG---EIDYAYVFELLAREGYEGYVGLEY 252 (273)
Q Consensus 180 ~~~~g~~~D~~h~~~-~-~~~--~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G---~id~~~i~~~L~~~gy~g~~~lE~ 252 (273)
| +++++|=+-... . +.. ..+.+..+.. ...+.++=. +.......+ ..+...+.+.+...|.+ .+.++-
T Consensus 173 -p-~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~-~~nv~~k~S-g~~~~~~~~~~~~~~~~~l~~~~~~~g~d-Rll~gS 247 (294)
T 4i6k_A 173 -S-FDVVIDHFGRVDPVKGIEDPDYQKFLSLLN-VKQHWIKVS-GFYRLGATPSNINIAQQAYNIFKEKGFLH-KLIWGS 247 (294)
T ss_dssp -S-SCEEESGGGCCCTTTCTTCHHHHHHHHHCC-TTTEEEECC-CGGGSSSTTHHHHHHHHHHHHHHHHTCGG-GEECCC
T ss_pred -C-CCEEEECCCCCCCCCCCCCHHHHHHHHHHh-CCCEEEEec-ccccccccCCCchhhHHHHHHHHHHhCcc-cEEEeC
Confidence 6 788776422111 0 111 2233444443 245666532 111110001 11233455667777755 567764
Q ss_pred e
Q psy13372 253 K 253 (273)
Q Consensus 253 ~ 253 (273)
.
T Consensus 248 D 248 (294)
T 4i6k_A 248 D 248 (294)
T ss_dssp C
T ss_pred C
Confidence 3
No 107
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=87.85 E-value=5 Score=32.17 Aligned_cols=68 Identities=16% Similarity=0.252 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcCCCeEEecC-CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHH
Q psy13372 89 SLEKTIQYACALNIPAIHIMS-GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~ 167 (273)
....++++.+.+|+..+.++| |+. ...+-++.+++.|.++|+ .|||.+. --+.+.++
T Consensus 146 ~vetAiaml~dmG~~SvKffPm~Gl---------------~~l~E~~avAka~a~~g~--~lEPTGG-----Idl~N~~~ 203 (249)
T 3m0z_A 146 PLETAIALLKDMGGSSIKYFPMGGL---------------KHRAEFEAVAKACAAHDF--WLEPTGG-----IDLENYSE 203 (249)
T ss_dssp EHHHHHHHHHHTTCCEEEECCCTTT---------------TTHHHHHHHHHHHHHTTC--EEEEBSS-----CCTTTHHH
T ss_pred eHHHHHHHHHHcCCCeeeEeecCCc---------------ccHHHHHHHHHHHHHcCc--eECCCCC-----ccHhhHHH
Confidence 467899999999999999875 222 124557788889999999 9999764 34778888
Q ss_pred HHHHHHHHhhcCCC
Q psy13372 168 AERLIRELRAHGIS 181 (273)
Q Consensus 168 ~~~li~~~~~~~~~ 181 (273)
..+++ -+.+-+
T Consensus 204 I~~i~---l~aGv~ 214 (249)
T 3m0z_A 204 ILKIA---LDAGVS 214 (249)
T ss_dssp HHHHH---HHHTCS
T ss_pred HHHHH---HHcCCC
Confidence 88888 665543
No 108
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=87.80 E-value=2.2 Score=36.42 Aligned_cols=145 Identities=9% Similarity=-0.032 Sum_probs=81.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCC--ccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEV--DENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
++...+..+..-|.++|=+.-.++ ...........||-+. +..+. ....| ..+.. ......+.|.+
T Consensus 54 ~~K~lv~~~~~~~asaILlD~~~G---~~a~~~~~~~~GLii~-~E~~G~~~~~~g--r~p~~------l~~~sve~a~~ 121 (332)
T 3iv3_A 54 ELKVLVSEELTPYASSILLDPEYG---LPAAQARDREAGLLLA-YEKTGYDANTTS--RLPDC------LVDWSIKRLKE 121 (332)
T ss_dssp HHHHHHHHHHGGGSSEEEECTTTC---HHHHHTSCTTCEEEEE-CBCCCCCTTSSC--CCCCB------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEchhhC---HHHhccccCCCcEEEE-eccCCCCcCCCC--CCCcc------ccccCHHHHHH
Confidence 356666777778888888864444 2222222234444332 21110 01111 12211 12245778889
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCc-ccCC-------HHHHHHH
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGY-YLSS-------FRVAERL 171 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~-~~~~-------~~~~~~l 171 (273)
+|+..|.++....+.+ .++..++..+.|.++.+.+++.|+.+.+|++... ... --.+ ++.....
T Consensus 122 ~GADAVk~lv~~g~d~------~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~--~~~~~~~~~~~a~~~p~~V~~a 193 (332)
T 3iv3_A 122 AGADAVKFLLYYDVDG------DPQVNVQKQAYIERIGSECQAEDIPFFLEILTYD--ETISNNSSVEFAKVKVHKVNDA 193 (332)
T ss_dssp TTCSEEEEEEEECTTS------CHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECB--TTBSCTTSHHHHTTHHHHHHHH
T ss_pred cCCCEEEEEEEcCCCc------hHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccC--CCCCCCcchhhhccCHHHHHHH
Confidence 9999998875432221 2334457788999999999999999999997632 110 1112 3446667
Q ss_pred HHHH--hhcCCCceeEe
Q psy13372 172 IREL--RAHGISNVQLQ 186 (273)
Q Consensus 172 i~~~--~~~~~~~~g~~ 186 (273)
+|++ .+++.+-+++-
T Consensus 194 ~R~~~~~elGaDv~Kve 210 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVE 210 (332)
T ss_dssp HHHHTSGGGCCSEEEEC
T ss_pred HHHHhhcCcCCcEEEEe
Confidence 7555 34454445554
No 109
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=87.70 E-value=2.2 Score=34.94 Aligned_cols=67 Identities=15% Similarity=0.134 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
-.....+.++++++.|..+|++++++..-.. ++.++ +......++-+.+.|.+..+...+.||++-+
T Consensus 42 GH~~G~~~l~~i~~~c~~lGI~~lTlYaFStENwkRp-~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~ 109 (253)
T 3sgv_B 42 GHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP-AQEVSALMELFVWALDSEVKSLHRHNVRLRI 109 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEEEECC------------CHHHHHHHHTTHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEEEEchhccCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCeEEEE
Confidence 3445678899999999999999999976433 22221 1113334555666777777778889998775
No 110
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=87.67 E-value=2.1 Score=36.80 Aligned_cols=100 Identities=10% Similarity=-0.012 Sum_probs=59.3
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc----cCCH
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY----LSSF 165 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~----~~~~ 165 (273)
.++.+++.+.+|.+.|+++.+...-..+.+ ....-+...+.++++++.|.++|+.+.|..|......+.. -.+.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~--~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~~g~~~~~~~~~~ 122 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNL--GGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARWNGGIIGQGGPTN 122 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCT--TCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEETTEETTTTSSCH
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcccCCcccCCCHHHH
Confidence 456777888999999999765321000000 1111235688899999999999999998886532001111 1256
Q ss_pred HHHHHHHHHH-hhc-CCCceeEeeeccccc
Q psy13372 166 RVAERLIREL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 166 ~~~~~li~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
+...++.+.+ +.+ +.|+| .||+.+-.
T Consensus 123 ~~~~~~w~~iA~ryk~~~~V--i~el~NEP 150 (340)
T 3qr3_A 123 AQFTSLWSQLASKYASQSRV--WFGIMNEP 150 (340)
T ss_dssp HHHHHHHHHHHHHHTTCTTE--EEECCSCC
T ss_pred HHHHHHHHHHHHHhCCCCcE--EEEecCCC
Confidence 6666666332 222 34666 38887653
No 111
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=87.57 E-value=5.3 Score=37.90 Aligned_cols=96 Identities=6% Similarity=-0.019 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCC----CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTES----SRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
++.+++.|+..+..+...++.|+...+. .+. ...+ +...+.+++++++|++.||++..|-.+.. .+.
T Consensus 143 ~~~ik~~id~ma~~KlN~~h~hl~Ddp~~~~~~wr--~~yP---~lt~~ei~elv~yA~~rgI~vvpeI~Pg~----~~~ 213 (716)
T 2cho_A 143 HQARLSQLKFYGKNKMNTYIYGPKDDPYHSAPNWR--LPYP---DKEAAQLQELVAVANENEVDFVWAIHPGQ----DIK 213 (716)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCTTTSTTGGG--SCCC---HHHHHHHHHHHHHHHHTTCEEEEEECCTT----TCC
T ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCccccccccc--ccCC---hhhHHHHHHHHHHHHHcCCEEEEeecccc----cCC
Confidence 6789999999999999999998743311 110 0011 12567899999999999999998864321 122
Q ss_pred CCHHHHHHHHHHH---hhcCCCceeEeeeccc
Q psy13372 163 SSFRVAERLIREL---RAHGISNVQLQFDFFN 191 (273)
Q Consensus 163 ~~~~~~~~li~~~---~~~~~~~~g~~~D~~h 191 (273)
-+.++...++.-+ .+++...+++.+|-.+
T Consensus 214 ~~~~~~~~l~~k~~~l~~lG~r~~~i~~Dd~~ 245 (716)
T 2cho_A 214 WNKEDRDLLLAKFEKMYQLGVRSFAVFFDDIS 245 (716)
T ss_dssp SSHHHHHHHHHHHHHHHHTTCCEEEEECCSCC
T ss_pred CCHHHHHHHHHHHHHHHhcCCCeeEEecccCC
Confidence 2345555555222 3567778999987543
No 112
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=87.52 E-value=4.3 Score=33.90 Aligned_cols=98 Identities=15% Similarity=0.098 Sum_probs=57.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
+..++..+.+|.+.|+++.+...-..+.+ ....-+...+.++++++.|.++|+.+.|..|......+....+.+...+
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~~~~~~~--~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~~g~~~~~~~~~~~ 111 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMERLVPNSM--TGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNSIISSPSDFET 111 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSST--TSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETTEECCCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEecccHHHcCCCCC--CCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccccCCcCCcHHHHHH
Confidence 34667777899999999754210000000 1111245677899999999999999998886531001222335667677
Q ss_pred HHHHH-hhc-CCCceeEeeecccc
Q psy13372 171 LIREL-RAH-GISNVQLQFDFFNA 192 (273)
Q Consensus 171 li~~~-~~~-~~~~~g~~~D~~h~ 192 (273)
+.+.+ +.+ +.|+| .+++.|-
T Consensus 112 ~~~~ia~~~~~~~~V--~~~l~NE 133 (305)
T 1h1n_A 112 FWKTVASQFASNPLV--IFDTDNE 133 (305)
T ss_dssp HHHHHHHTSTTCTTE--EEECCSC
T ss_pred HHHHHHHHhCCCCeE--EEeccCC
Confidence 66332 223 34665 7777664
No 113
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=87.31 E-value=3.9 Score=32.75 Aligned_cols=136 Identities=15% Similarity=0.064 Sum_probs=75.3
Q ss_pred cccccccccccccCHH---HHHHHHHHcCCCeEEecCCCC-----CC--CHHHHHHHHHH---cCCeeEEEecCCccccC
Q psy13372 9 AANLTLLFNDLAANYL---DKYRVAAELGFRYIESWFPPV-----GV--TLEQLVAAQTR---HGLKQVLINTEVDENFG 75 (273)
Q Consensus 9 ~~~~~~~~~~~~~~~~---~~l~~~~~~G~~~vEl~~~~~-----~~--~~~~~~~~l~~---~gL~i~~~~~~~~~~~~ 75 (273)
.+++...|+.-..+.+ ...+.+-+.|.|.|++..+.+ .+ -.+++++..+. .+|++.. ..+
T Consensus 56 ~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIl-------et~ 128 (220)
T 1ub3_A 56 RLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVIL-------ETG 128 (220)
T ss_dssp EEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEEC-------CGG
T ss_pred eEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEE-------ecC
Confidence 3444445543111333 345667789999999997632 11 12444444443 3333321 111
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCC
Q psy13372 76 YAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQH 155 (273)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~ 155 (273)
.. + -+.+.+++++|.++|+.+|.+-+|..+..- +. .-++.+++.+ ....+|+++
T Consensus 129 ~l-~-------~e~i~~a~~ia~eaGADfVKTsTGf~~~ga-----t~----~dv~~m~~~v--g~~v~Vkaa------- 182 (220)
T 1ub3_A 129 YF-S-------PEEIARLAEAAIRGGADFLKTSTGFGPRGA-----SL----EDVALLVRVA--QGRAQVKAA------- 182 (220)
T ss_dssp GS-C-------HHHHHHHHHHHHHHTCSEEECCCSSSSCCC-----CH----HHHHHHHHHH--TTSSEEEEE-------
T ss_pred CC-C-------HHHHHHHHHHHHHhCCCEEEeCCCCCCCCC-----CH----HHHHHHHHhh--CCCCeEEEE-------
Confidence 11 1 246888999999999999999887653321 11 2233444443 233444444
Q ss_pred CCCCcccCCHHHHHHHHHHHhhcCCCceeE
Q psy13372 156 SVPGYYLSSFRVAERLIRELRAHGISNVQL 185 (273)
Q Consensus 156 ~~~~~~~~~~~~~~~li~~~~~~~~~~~g~ 185 (273)
.+ +.|.+++++++ + .+...+|.
T Consensus 183 --GG--irt~~~al~~i---~-aGa~RiG~ 204 (220)
T 1ub3_A 183 --GG--IRDRETALRML---K-AGASRLGT 204 (220)
T ss_dssp --SS--CCSHHHHHHHH---H-TTCSEEEE
T ss_pred --CC--CCCHHHHHHHH---H-CCCcccch
Confidence 12 45889999999 6 45555554
No 114
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=87.16 E-value=14 Score=32.97 Aligned_cols=89 Identities=18% Similarity=0.181 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc-cCCHHHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY-LSSFRVAE 169 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~-~~~~~~~~ 169 (273)
++.++..+.+|+..||++.+. +..+ .+. ..+.|.++++.|.++|+.+.|+.|... +.. ..+.+.+.
T Consensus 42 ~~di~~ik~~G~N~VRipv~~-g~~~-----~~~----~l~~ld~vv~~a~~~Gl~VIlDlH~~~---g~~~~~~~~~~~ 108 (464)
T 1wky_A 42 TTAIEGIANTGANTVRIVLSD-GGQW-----TKD----DIQTVRNLISLAEDNNLVAVLEVHDAT---GYDSIASLNRAV 108 (464)
T ss_dssp HHHHHHHHTTTCSEEEEEECC-SSSS-----CCC----CHHHHHHHHHHHHHTTCEEEEEECTTT---TCCCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEcCC-CCcc-----CHH----HHHHHHHHHHHHHHCCCEEEEEecCCC---CCCChHHHHHHH
Confidence 456777788999999997642 1111 111 356789999999999999999987532 111 12344555
Q ss_pred HHHHHH-hhc-CC-CceeEeeecccccc
Q psy13372 170 RLIREL-RAH-GI-SNVQLQFDFFNAQR 194 (273)
Q Consensus 170 ~li~~~-~~~-~~-~~~g~~~D~~h~~~ 194 (273)
++.+++ +.. ++ +.+ .|++.|-..
T Consensus 109 ~~w~~iA~ryk~~~~~V--i~eL~NEP~ 134 (464)
T 1wky_A 109 DYWIEMRSALIGKEDTV--IINIANEWF 134 (464)
T ss_dssp HHHHHTGGGTTTCTTTE--EEECCTTCC
T ss_pred HHHHHHHHHHcCCCCeE--EEEeccCCC
Confidence 555222 233 23 455 479888643
No 115
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=87.03 E-value=3.5 Score=34.44 Aligned_cols=129 Identities=9% Similarity=-0.020 Sum_probs=67.9
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCC---ee-EEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGL---KQ-VLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL---~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
.+.++.++.+++.|.+.+=+.+... .+.+...++.+++.- .+ .+++.... . ..... +..++.+++.++
T Consensus 17 ~d~~~vl~~a~~~gV~~~v~~g~~~-~~~~~~~~la~~~~~~~~~v~~~~GiHP~-~--~~~~~---~~~~~~l~~l~~- 88 (287)
T 3rcm_A 17 DQQAAIVERALEAGVTQMLLTGTSL-AVSEQALELCQQLDASGAHLFATAGVHPH-D--AKAWD---TDSERQLRLLLS- 88 (287)
T ss_dssp TCHHHHHHHHHHTTEEEEEECCCSH-HHHHHHHHHHHHHCTTSSSEEEEECCCGG-G--GGGCC---TTHHHHHHHHHT-
T ss_pred cCHHHHHHHHHHcCCeEEEEecCCH-HHHHHHHHHHHhCCCCCceEEEEEEECcC-c--cccCC---HHHHHHHHHHhc-
Confidence 4789999999999988765543211 334556666666643 23 34443211 0 00001 112333333322
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
. -+.+.+ |-.+-+.. . .....+...+.+++.+++|+++|..+.++.- ...++.++++ +
T Consensus 89 --~--~~vvaI--GEiGLD~~-~--~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r----------~a~~~~l~il---~ 146 (287)
T 3rcm_A 89 --E--PRVRAV--GECGLDFN-R--DFSPRPLQEKALEAQLTLAAQLRLPVFLHER----------DASERLLAIL---K 146 (287)
T ss_dssp --S--TTEEEE--EEEEEETT-T--CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE----------SCHHHHHHHH---H
T ss_pred --C--CCeEEE--EEeeeCCC-c--ccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC----------CcHHHHHHHH---H
Confidence 1 223333 22111100 0 1123556677888889999999999988862 1245666777 6
Q ss_pred hcC
Q psy13372 177 AHG 179 (273)
Q Consensus 177 ~~~ 179 (273)
+..
T Consensus 147 ~~~ 149 (287)
T 3rcm_A 147 DYR 149 (287)
T ss_dssp TTG
T ss_pred HcC
Confidence 543
No 116
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=86.89 E-value=4.8 Score=32.62 Aligned_cols=68 Identities=9% Similarity=0.140 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHcCCCeEEecC-CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHH
Q psy13372 89 SLEKTIQYACALNIPAIHIMS-GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~ 167 (273)
..+.++++.+.+|+..+.++| |+. ...+-++.+++.|.++|+ .|||.+. --+.+.++
T Consensus 169 ~vetAiaml~dmG~~SvKffPM~Gl---------------~~leEl~avAkAca~~g~--~lEPTGG-----Idl~Nf~~ 226 (275)
T 3m6y_A 169 PIKTAIALVRDMGGNSLKYFPMKGL---------------AHEEEYRAVAKACAEEGF--ALEPTGG-----IDKENFET 226 (275)
T ss_dssp EHHHHHHHHHHHTCCEEEECCCTTT---------------TTHHHHHHHHHHHHHHTC--EEEEBSS-----CCTTTHHH
T ss_pred eHHHHHHHHHHcCCCeeeEeecCCc---------------ccHHHHHHHHHHHHHcCc--eECCCCC-----ccHhHHHH
Confidence 467899999999999999875 222 124557788888999999 9999764 34778888
Q ss_pred HHHHHHHHhhcCCC
Q psy13372 168 AERLIRELRAHGIS 181 (273)
Q Consensus 168 ~~~li~~~~~~~~~ 181 (273)
..+++ -+.+-+
T Consensus 227 I~~i~---l~aGv~ 237 (275)
T 3m6y_A 227 IVRIA---LEANVE 237 (275)
T ss_dssp HHHHH---HHTTCS
T ss_pred HHHHH---HHcCCC
Confidence 88888 666544
No 117
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=86.84 E-value=8.8 Score=31.38 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=46.4
Q ss_pred HHHHHHHHHHcCCCeEEecCC--CCCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFP--PVGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
..+-++.++++|.+||-+-.- ....+.+.++++++.. |+.++ ++-.++ ...++ ..+++....
T Consensus 75 M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vT-FHRAfD----~~~d~----------~~ale~L~~ 139 (256)
T 1twd_A 75 ILEDVRTVRELGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVT-FHRAFD----MCANP----------LYTLNNLAE 139 (256)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEE-ECGGGG----GCSCH----------HHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEE-EECchh----ccCCH----------HHHHHHHHH
Confidence 344567889999999999852 3346778888887664 56655 433221 11222 235666777
Q ss_pred cCCCeEEecC
Q psy13372 100 LNIPAIHIMS 109 (273)
Q Consensus 100 lG~~~i~~~~ 109 (273)
+|+.+|-+..
T Consensus 140 lG~~rILTSG 149 (256)
T 1twd_A 140 LGIARVLTSG 149 (256)
T ss_dssp HTCCEEEECT
T ss_pred cCCCEEECCC
Confidence 8999998743
No 118
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=86.46 E-value=15 Score=31.74 Aligned_cols=213 Identities=13% Similarity=0.088 Sum_probs=114.7
Q ss_pred ccccccccccccccCHHHHHHHHHHcCCCeEE--ecCCCC-C----CCHHHHHHHHHHcCCeeEE-EecCCccccCCCCC
Q psy13372 8 LAANLTLLFNDLAANYLDKYRVAAELGFRYIE--SWFPPV-G----VTLEQLVAAQTRHGLKQVL-INTEVDENFGYAAV 79 (273)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vE--l~~~~~-~----~~~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~ 79 (273)
+|+|. +.-...-....+-++.++++||+.|= +..|.+ . ...+++.+.+++.|+++.. ++.......|.+.+
T Consensus 5 lGiSv-Y~~~~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~ 83 (372)
T 2p0o_A 5 YGISV-FLGEEITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFD 83 (372)
T ss_dssp EEEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTT
T ss_pred EEEEE-cCCCCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHH
Confidence 67665 22222111233669999999999883 334432 1 1246788889999999985 32211112222211
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCC
Q psy13372 80 KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPG 159 (273)
Q Consensus 80 ~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~ 159 (273)
-+...+.+|+..+++-.|.- ..+.+.+... ++|.| |.+
T Consensus 84 -------------dl~~~~~lGi~glRLD~Gf~--------------------~~eia~ls~n--lkIeL-NAS------ 121 (372)
T 2p0o_A 84 -------------ELEPLIELGVTGLRMDYGIT--------------------IEQMAHASHK--IDIGL-NAS------ 121 (372)
T ss_dssp -------------BCHHHHHHTCCEEEECSSCC--------------------HHHHHHHHTT--SEEEE-ETT------
T ss_pred -------------HHHHHHHcCCCEEEEcCCCC--------------------HHHHHHHhcC--CEEEE-ECc------
Confidence 22344667999999976532 1123334443 56554 321
Q ss_pred cccCCHHHHHHHHHHHhh-cCCCceeEeeecccccccCCChH------HHHHhcCCcceeEEeccCCCCCCCCC------
Q psy13372 160 YYLSSFRVAERLIRELRA-HGISNVQLQFDFFNAQRICGDLT------HTFGACRDLIGHVQIAQAPDRQEPHA------ 226 (273)
Q Consensus 160 ~~~~~~~~~~~li~~~~~-~~~~~~g~~~D~~h~~~~~~~~~------~~i~~~~~~i~~vHi~d~~~~~~~g~------ 226 (273)
.-+.+....++ +. .+.+++-.|.+++.-...|-+.. ++++.++=++..+=-.|...|++..+
T Consensus 122 --ti~~~~l~~l~---~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~~Gi~t~AFI~g~~~~rGPl~eGLPTLE 196 (372)
T 2p0o_A 122 --TITLEEVAELK---AHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKELGLQVFTFVPGDGQTRGPIFAGLPTLE 196 (372)
T ss_dssp --TCCHHHHHHHH---HTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHHTTCEEEEEECCSSSCCTTTCSCCCSBG
T ss_pred --cCCHHHHHHHH---HcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHHCCCcEEEEecCCCccCCCccCCCCchH
Confidence 11455555555 43 23456888998888777776644 44555665555555555434444433
Q ss_pred --CCcccHHHHHHHHHHc-CCCceEEEeeecCCChHHHHHHHHHhh
Q psy13372 227 --RGEIDYAYVFELLARE-GYEGYVGLEYKPQGNTKEGLEEFLKTF 269 (273)
Q Consensus 227 --~G~id~~~i~~~L~~~-gy~g~~~lE~~~~~~~~~~~~~~~~~~ 269 (273)
++.-++.... .|... +-+..++=.....++..+.++.|+++.
T Consensus 197 ~HR~~~~~~~a~-~L~~~~~iD~V~IGd~~~S~~el~~l~~~~~~~ 241 (372)
T 2p0o_A 197 KHRGQNPFAAAV-GLMADPYVDAVYIGDPTISERTMAQFGYYHQTN 241 (372)
T ss_dssp GGTTSCHHHHHH-HHHHSTTCCEEEECSSCCCHHHHHHHHHHHHHS
T ss_pred HhCCCCHHHHHH-HHHhcCCCCEEEECCCCCCHHHHHHHHHHHhcC
Confidence 1333444444 45555 566555555555555566666335543
No 119
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=86.34 E-value=13 Score=30.59 Aligned_cols=94 Identities=15% Similarity=0.092 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSS 164 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~ 164 (273)
+.+.+.++.+++.|+..|..|....+. +...+...+.+.++.+.|.+.||. |.+-|.- +.+..+
T Consensus 103 d~~~~~~~~~a~~~~~vvlmh~~~~G~--------p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~-----g~~g~~ 169 (262)
T 1f6y_A 103 EKVEKLFPLAVEHGAALIGLTMNKTGI--------PKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLI-----LPANVA 169 (262)
T ss_dssp HHHHHHHHHHHHTTCEEEEESCCSSCS--------CSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC-----CCTTTC
T ss_pred ccHHHHHHHHHHhCCcEEEEcCCCCCC--------CCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCC-----CcCCCC
Confidence 455678899999999999988632211 122455667889999999999995 9999842 123344
Q ss_pred HHHHHHHHHHHhhcCC---CceeEeeecccccc
Q psy13372 165 FRVAERLIRELRAHGI---SNVQLQFDFFNAQR 194 (273)
Q Consensus 165 ~~~~~~li~~~~~~~~---~~~g~~~D~~h~~~ 194 (273)
.++..++++.++.+.. |++-+++=+++-..
T Consensus 170 ~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srksf 202 (262)
T 1f6y_A 170 QDHAPEVLKTLQQIKMLADPAPKTVLGLSNVSQ 202 (262)
T ss_dssp TTHHHHHHHHHHHHHTCCSSCCEEEEEGGGGGT
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCEEEeecCCcC
Confidence 4544555533344432 45666666655543
No 120
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=86.14 E-value=1.8 Score=36.79 Aligned_cols=82 Identities=10% Similarity=0.056 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCC-CCCCCCC----cchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcc
Q psy13372 91 EKTIQYACALNIPAIHIMSGKT-ESS-RTQPIAS----EDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYY 161 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~-~~~-~~~~~~~----~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~ 161 (273)
.+.++.+++.|+..|..|..+. +.. ...+ .+ ++..+...+.|.+..+.|.++||. |.+-|. -.|
T Consensus 150 ~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~-~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDPG------~GF 222 (318)
T 2vp8_A 150 PAMPEVAAEFGAGLVCAHTGGALPRTRPFRV-SYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDPA------HDF 222 (318)
T ss_dssp TTHHHHHHHHTCEEEEECC--------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEETT------TTC
T ss_pred hHHHHHHHHhCCCEEEECCCCCCcccccccc-ccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcCC------CCc
Confidence 3678888999999999986322 211 0001 12 455677788999999999999995 999983 235
Q ss_pred cCCHHHHHHHHHHHhhcC
Q psy13372 162 LSSFRVAERLIRELRAHG 179 (273)
Q Consensus 162 ~~~~~~~~~li~~~~~~~ 179 (273)
..+.++.+++++.|+.+.
T Consensus 223 ~Kt~~~nl~ll~~l~~l~ 240 (318)
T 2vp8_A 223 GKNTFHGLLLLRHVADLV 240 (318)
T ss_dssp CTTSHHHHHHHHTHHHHH
T ss_pred ccCHHHHHHHHHHHHHHH
Confidence 778888899996666553
No 121
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=86.12 E-value=4.9 Score=32.82 Aligned_cols=143 Identities=13% Similarity=0.042 Sum_probs=86.3
Q ss_pred cccccccccccc------ccccCHHHHHHHHHHcCCCeEEecCCCCC--CCHHHHHHHHHHcCCeeEEEecCCccccCCC
Q psy13372 6 FKLAANLTLLFN------DLAANYLDKYRVAAELGFRYIESWFPPVG--VTLEQLVAAQTRHGLKQVLINTEVDENFGYA 77 (273)
Q Consensus 6 ~k~~~~~~~~~~------~~~~~~~~~l~~~~~~G~~~vEl~~~~~~--~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~ 77 (273)
||||||.--+.. ...+++.++...+.+.| |+|.++...|. ...+.+..+.+....++-. - .+
T Consensus 4 ~~LgVNIDhIAtLRnARg~~~Pdpv~aA~~ae~aG-dgITvHlReDrRHI~d~Dv~~L~~~~~~~lNl-E--------~a 73 (260)
T 3o6c_A 4 MLLGVNIDHIAVLRQARMVNDPDLLEAAFIVARHG-DQITLHVREDRRHAQDFDLENIIKFCKSPVNL-E--------CA 73 (260)
T ss_dssp CEEEEECHHHHHHHHHHTSCCSCHHHHHHHHHHHS-SEEEEECCTTCSSSCHHHHHHHHHHCSSCEEE-E--------EC
T ss_pred ceEEeecchhhhhhccCCCCCCCHHHHHHHHHHhC-CeEEEeeCCCcccCCHHHHHHHHHHcCCCEEe-e--------cC
Confidence 688988643322 12358899999999999 99999975442 1233344333332322221 1 11
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCC
Q psy13372 78 AVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQH 155 (273)
Q Consensus 78 ~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~ 155 (273)
+. ...+++|.++....+.+.|-.+..- +++..|+--.+.|+.+++..++.||+ +.++|
T Consensus 74 ~t-----------~emi~ial~~kP~~vtLVPEkreE~-----TTegGldv~~~~L~~~i~~L~~~GIrVSLFIDp---- 133 (260)
T 3o6c_A 74 LN-----------DEILNLALKLKPHRVTLVPEKREEL-----TTEGGLCLNHAKLKQSIEKLQNANIEVSLFINP---- 133 (260)
T ss_dssp SC-----------HHHHHHHHHHCCSEEEECCCSGGGB-----CTTSSBCTTCTTHHHHHHHHHHTTCEEEEEECS----
T ss_pred CC-----------HHHHHHHHHcCCCEEEECCCCCCcc-----CCCCChhhCHHHHHHHHHHHHHCCCEEEEEeCC----
Confidence 21 2478888999999999977554221 14444443556788888888899987 44454
Q ss_pred CCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccc
Q psy13372 156 SVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNA 192 (273)
Q Consensus 156 ~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~ 192 (273)
-.+.++.. .+++.+ .+-+.||++
T Consensus 134 ---------d~~qi~aA---~~~GAd--~IELhTG~Y 156 (260)
T 3o6c_A 134 ---------SLEDIEKS---KILKAQ--FIELHTGHY 156 (260)
T ss_dssp ---------CHHHHHHH---HHTTCS--EEEECCHHH
T ss_pred ---------CHHHHHHH---HHhCCC--EEEEechHh
Confidence 12346666 777666 455666654
No 122
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=86.10 E-value=13 Score=30.69 Aligned_cols=133 Identities=11% Similarity=0.064 Sum_probs=65.2
Q ss_pred CHHHHHHHH---HHcCCCeEEecCCC-C-CCCHHHHHHH---HHHc--CCeeEEEecC--CccccCCCCCchhHHHHHHH
Q psy13372 22 NYLDKYRVA---AELGFRYIESWFPP-V-GVTLEQLVAA---QTRH--GLKQVLINTE--VDENFGYAAVKGKESEFRAS 89 (273)
Q Consensus 22 ~~~~~l~~~---~~~G~~~vEl~~~~-~-~~~~~~~~~~---l~~~--gL~i~~~~~~--~~~~~~~~~~~~~~~~~~~~ 89 (273)
++++.++.+ ...|.|.||+..++ . ..+.+.+.+. +++. ++.+....-. .|+.+ ..++ + .
T Consensus 50 ~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~--~~~~---~----~ 120 (276)
T 3o1n_A 50 TITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQ--ALTT---G----Q 120 (276)
T ss_dssp SHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSB--CCCH---H----H
T ss_pred CHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCC--CCCH---H----H
Confidence 556666554 45799999999763 2 1233444433 3333 5665532211 11221 1112 2 3
Q ss_pred HHHHHHHHHHcC-CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 90 LEKTIQYACALN-IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 90 ~~~~i~~a~~lG-~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
....++.+.++| +.+|-+-... . -+.++++.+.|++.|+++.+-.|+.. -.++.++.
T Consensus 121 ~~~ll~~~l~~g~~dyIDvEl~~----------~-------~~~~~~l~~~a~~~~~kvI~S~Hdf~-----~tP~~~el 178 (276)
T 3o1n_A 121 YIDLNRAAVDSGLVDMIDLELFT----------G-------DDEVKATVGYAHQHNVAVIMSNHDFH-----KTPAAEEI 178 (276)
T ss_dssp HHHHHHHHHHHTCCSEEEEEGGG----------C-------HHHHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHH
T ss_pred HHHHHHHHHhcCCCCEEEEECcC----------C-------HHHHHHHHHHHHhCCCEEEEEeecCC-----CCcCHHHH
Confidence 334555555677 7777764210 0 12455666667777777665544321 12345566
Q ss_pred HHHHHHHhhcCCCceeE
Q psy13372 169 ERLIRELRAHGISNVQL 185 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~ 185 (273)
..++++....+..-+++
T Consensus 179 ~~~~~~~~~~GaDIvKi 195 (276)
T 3o1n_A 179 VQRLRKMQELGADIPKI 195 (276)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 66663333333333444
No 123
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=86.04 E-value=9.6 Score=30.63 Aligned_cols=94 Identities=7% Similarity=-0.007 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHcCCCeEEecC------CCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF------PPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~------~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
.+.+.++.+ +.|.|.+++.. |.-......++++.+..++.+..+-+- .+|+ +.++
T Consensus 14 ~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~~~~~dvhLmv--------~dp~----------~~i~ 74 (231)
T 3ctl_A 14 KFKEQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMV--------TRPQ----------DYIA 74 (231)
T ss_dssp GHHHHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTCCSCEEEEEES--------SCGG----------GTHH
T ss_pred hHHHHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhccCCcEEEEEEe--------cCHH----------HHHH
Confidence 789999999 99999877763 211134555555444335655554331 2342 2457
Q ss_pred HHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 96 YACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
.+...|+..+++|.-.. . ..+.++.+.++++|+++++--
T Consensus 75 ~~~~aGAd~itvh~Ea~--~---------------~~~~~~i~~i~~~G~k~gv~l 113 (231)
T 3ctl_A 75 QLARAGADFITLHPETI--N---------------GQAFRLIDEIRRHDMKVGLIL 113 (231)
T ss_dssp HHHHHTCSEEEECGGGC--T---------------TTHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHcCCCEEEECcccC--C---------------ccHHHHHHHHHHcCCeEEEEE
Confidence 77788999999985221 1 124566777888998876654
No 124
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=85.87 E-value=3.7 Score=33.96 Aligned_cols=74 Identities=9% Similarity=0.150 Sum_probs=56.5
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc---EEEEccCCCCCCCCcccCCHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL---TALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv---~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
+.++.++..|++.+..|....+. ++...+.+...|.+-.+.|.+.|| +|.+-| .-.|.-|.++-
T Consensus 116 ~m~~~va~~~~~~vlMH~~~~p~-------~~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDP------GiGFgKt~~~N 182 (270)
T 4hb7_A 116 RMFQIVAKYDAEIILMHNGNGNR-------DEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP------GIGFAKTRNEE 182 (270)
T ss_dssp HHHHHHHHTTCEEEEECCCSSCC-------SSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEC------CTTSSCCHHHH
T ss_pred hHHHHHHHcCCCeEEeccccCCc-------cccchhHHHHHHHHHHHHHHHcCCCCceEEEeC------CCCcccccccH
Confidence 46778888999999998643321 455677888888888899999999 599988 23478899999
Q ss_pred HHHHHHHhhc
Q psy13372 169 ERLIRELRAH 178 (273)
Q Consensus 169 ~~li~~~~~~ 178 (273)
+++++.|+.+
T Consensus 183 ~~ll~~l~~~ 192 (270)
T 4hb7_A 183 AEVMARLDEL 192 (270)
T ss_dssp HHHHTCHHHH
T ss_pred HHHHhhHHHH
Confidence 9999555544
No 125
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=85.62 E-value=14 Score=30.50 Aligned_cols=207 Identities=10% Similarity=-0.006 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA 97 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 97 (273)
++++.++.+.+.|.+..=+.... .....+.+.++.+++.=.+..+.. + +|...+.+.+.+++ +
T Consensus 48 ~~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~-------v--~p~~~~~a~~eL~~----~ 114 (291)
T 3irs_A 48 SLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGS-------I--EAATRKEAMAQMQE----I 114 (291)
T ss_dssp CHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEE-------C--CCSSHHHHHHHHHH----H
T ss_pred CHHHHHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEe-------c--CccCHHHHHHHHHH----H
Confidence 88999999999999876554321 114567788888888744443322 1 11111233444444 4
Q ss_pred HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhh
Q psy13372 98 CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRA 177 (273)
Q Consensus 98 ~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~ 177 (273)
...|+.-|.++++..+.... .. -+.+..+.+.|.++|+.+.+++-... .+..-..++.++..++ ++
T Consensus 115 ~~~g~~Gi~~~~~~~~~~~~----~~------d~~~~~~~~~a~e~glpv~iH~~~~~-~~~~~~~~p~~~~~v~---~~ 180 (291)
T 3irs_A 115 LDLGIRIVNLEPGVWATPMH----VD------DRRLYPLYAFCEDNGIPVIMMTGGNA-GPDITYTNPEHIDRVL---GD 180 (291)
T ss_dssp HHTTCCCEEECGGGSSSCCC----TT------CGGGHHHHHHHHHTTCCEEEECSSSC-SSSGGGGCHHHHHHHH---HH
T ss_pred HhCCCeEEEEeCCCCCCCCC----CC------CHHHHHHHHHHHHcCCeEEEeCCCCC-CCCCccCCHHHHHHHH---HH
Confidence 57899999887654211100 11 13467778899999999999974321 0111123466788888 88
Q ss_pred cCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee-cCC
Q psy13372 178 HGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK-PQG 256 (273)
Q Consensus 178 ~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~-~~~ 256 (273)
. |++.+.++ |.-. ....+.++.+ .....+.++-. +.. + ..-.+..+.+.++..|-+ .+.++-. |-.
T Consensus 181 ~--P~l~ivl~--H~G~--~~~~~~~~l~-~~~~nvy~~~S-g~~---~-~~~~~~~~~~~~~~~g~d-rllfgSD~P~~ 247 (291)
T 3irs_A 181 F--PDLTVVSS--HGNW--PWVQEIIHVA-FRRPNLYLSPD-MYL---Y-NLPGHADFIQAANSFLAD-RMLFGTAYPMC 247 (291)
T ss_dssp C--TTCCEEEE--GGGT--TCHHHHHHHH-HHCTTEEEECG-GGG---S-SSTTHHHHHHHHTTGGGG-TBCCCCCBTSS
T ss_pred C--CCCEEEee--cCCc--ccHHHHHHHH-hHCCCeEecHH-HHh---c-cCCCHHHHHHHHHHhCcc-eEEEecCCCCC
Confidence 6 78887765 4321 2233333322 11123333311 100 0 011244566666656543 4566643 444
Q ss_pred ChHHHHHHHHHhh
Q psy13372 257 NTKEGLEEFLKTF 269 (273)
Q Consensus 257 ~~~~~~~~~~~~~ 269 (273)
+....++ ++++.
T Consensus 248 ~~~~~~~-~~~~l 259 (291)
T 3irs_A 248 PLKEYTE-WFLTL 259 (291)
T ss_dssp CHHHHHH-HHHTS
T ss_pred CHHHHHH-HHHHC
Confidence 4555565 66554
No 126
>1k87_A PUTA, proline dehydrogenase, proline dehydroge; multi-functional protein, transcripti repressor, shuttling, dimer, oxidoreductase; HET: FAD 1PE; 2.00A {Escherichia coli} SCOP: a.176.1.1 c.1.23.2
Probab=85.48 E-value=11 Score=35.39 Aligned_cols=119 Identities=9% Similarity=0.085 Sum_probs=71.5
Q ss_pred HHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC-------CCeEEecCCCCCCCCCCCCCCcch
Q psy13372 53 VAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN-------IPAIHIMSGKTESSRTQPIASEDP 125 (273)
Q Consensus 53 ~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG-------~~~i~~~~G~~~~~~~~~~~~~~~ 125 (273)
.+.+++.|+..+ +..- ++. ..+.+..+...+.+.++|+.....+ ...|.+-........+ +...+..
T Consensus 272 i~~L~~~G~~~s-lD~L--GEa--~~t~~eA~~~~~~y~~~I~~i~~~~~~~~~~~~~~VSVKlSaLg~~~~-~~~~~~~ 345 (669)
T 1k87_A 272 ARKLEEKGFRYS-YDML--GEA--ALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYS-RAQYDRV 345 (669)
T ss_dssp HHHHHTTTCEEE-EEEC--CCC--CCSHHHHHHHHHHHHHHHHHHHHHHSSCHHHHSCEEEECGGGTSTTGG-GCCHHHH
T ss_pred HHHHHhCCCeEE-EEee--ccc--cCCHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCeEEEeccccccccc-hhhhhhH
Confidence 344677888874 3321 122 1235555566666667776644322 4567775433322211 1113456
Q ss_pred HHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCC-------CceeEeee
Q psy13372 126 YTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGI-------SNVQLQFD 188 (273)
Q Consensus 126 ~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~-------~~~g~~~D 188 (273)
++.+.+++++++..|+++||.+.|--... ...+-+++++ ++++. +++|+++-
T Consensus 346 ~~~l~~rl~~L~~~A~~~gv~v~IDAEe~--------~~~~lTLdl~---~~l~~~~~~~~~~~vGivlQ 404 (669)
T 1k87_A 346 MEELYPRLKSLTLLARQYDIGINIDAEEA--------DRLEISLDLL---EKLCFEPELAGWNGIGFVIQ 404 (669)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEECCCCG--------GGHHHHHHHH---HHHTTCGGGTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEeCCCc--------chhHHHHHHH---HHHhcCcccccCCCceEEEe
Confidence 78999999999999999999999886321 1246778888 55432 46777644
No 127
>3r4v_A Putative uncharacterized protein; tubulin, unknown function; HET: GDP; 1.67A {Pseudomonas phage 201phi2-1} PDB: 3rb8_A*
Probab=84.97 E-value=0.73 Score=38.53 Aligned_cols=138 Identities=10% Similarity=0.006 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHH
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
..+++++.++...+-+.+.++-.+ -|.. ..--.++.|++.|+..+.+.++..+ .....+
T Consensus 70 ~~~eI~~~l~~aD~VFVtaGLGGG--TGTG-----------aAPVvAeiake~GalvVavVt~~~E--------~~~~~~ 128 (315)
T 3r4v_A 70 QIPALMDTIPEADFYIVCYSLGGG--SGSV-----------LGPLITGQLADRKASFVSFVVGAME--------STDNLG 128 (315)
T ss_dssp GHHHHHHTSCCBSCEEEEEESSSS--SHHH-----------HHHHHHHHHHHTTCCEEEEEEECCS--------SHHHHH
T ss_pred hHHHHHHhcCCCCEEEEEeccCCc--cccc-----------hHHHHHHHHHHcCCCEEEEEecCCC--------cchhhh
Confidence 356788888888888887766332 2211 2224667889999998877665432 335577
Q ss_pred HHHHHHHHHHHHHhhCCcEE---EEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHH
Q psy13372 128 TLKENLIYACAELERHSLTA---LIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFG 204 (273)
Q Consensus 128 ~~~~~l~~l~~~a~~~gv~i---~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~ 204 (273)
+.++.+..|-+++...+..| .+||.+.. +.-+--.+++ ..+ ..+-.+|+-.|-..-..|+..|+.
T Consensus 129 Nai~al~~LE~La~~~dt~Iv~d~Len~~~l-------p~~~lN~eia---~rL--~al~~l~~~~~~~ld~~di~n~~~ 196 (315)
T 3r4v_A 129 NDIDTMKTLEAIAVNKHLPIVVNYVPNTQGR-------SYESINDEIA---EKI--RKVVLLVNQNHGRLDVHDVANWVR 196 (315)
T ss_dssp HHHHHHHHHHHHHHHHTSCEEEEEEECCTTC-------CHHHHHHHHH---HHH--HHHHHHTSSCSBTCCHHHHHHHHS
T ss_pred chHHHHHHHHHHHhccCCcEEEeccccCCCC-------chHHHHHHHH---HHH--HHHHHHhccCcccccHHHHhhHhh
Confidence 77777777777777766666 67775432 1122224555 444 245566666666444344444443
Q ss_pred h------cCCcceeEEeccC
Q psy13372 205 A------CRDLIGHVQIAQA 218 (273)
Q Consensus 205 ~------~~~~i~~vHi~d~ 218 (273)
- ..|.+..+|+++.
T Consensus 197 ~~~~~~~~~p~~~~lh~~~~ 216 (315)
T 3r4v_A 197 FTDKHNYLIPQVCELHIETT 216 (315)
T ss_dssp GGGTCTTSCCCEEEEEEESS
T ss_pred hhcccCccCceEEEEEEEcc
Confidence 2 4567899999974
No 128
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=84.69 E-value=8.8 Score=33.19 Aligned_cols=197 Identities=11% Similarity=0.006 Sum_probs=100.4
Q ss_pred HHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHc---CCeeEEEecCCccccCCCCCch-hHHHHHHHHHHHHHHHHH
Q psy13372 25 DKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRH---GLKQVLINTEVDENFGYAAVKG-KESEFRASLEKTIQYACA 99 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~---gL~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~a~~ 99 (273)
+.+..++++|.+.|=...+.+ ..++..++++.++. |+.|++-..++...+ ....+. ..+...+.+...+-.=-.
T Consensus 53 ~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~~-~~~~~~~~~~~~~e~l~~~~~~ei~ 131 (363)
T 3ovg_A 53 KEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAKF-YDKYSSWLAVVPTEEIVKMCVAEIE 131 (363)
T ss_dssp HHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGGG-SCTTTSHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCcc-cccCcHhhhcCCHHHHHHHHHHHHH
Confidence 334456788987764444422 37899999999987 999997655432111 101111 111112222222222222
Q ss_pred cCC-----------------CeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 100 LNI-----------------PAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 100 lG~-----------------~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
.|+ ..|.+..+ .....+.-.+.++.-+++|++.|+.+.+++-. .
T Consensus 132 ~Gi~~~~~~gp~~~~t~ikaG~ikig~s-----------~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~--------g 192 (363)
T 3ovg_A 132 EGMDEYNYNGPVVKRSKAKAGIIKAGTG-----------YGAIDRLELKALEVAARTSILTGCPILVHTQL--------G 192 (363)
T ss_dssp TCCBTTTTSSSCCCBCSCCCCEEEEEEE-----------ETBEEHHHHHHHHHHHHHHHHHCCCEEEEEET--------T
T ss_pred hcccccccccccccCCCccCCEEEEEeC-----------CCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCC--------C
Confidence 332 22222111 11223445677888889999999999999721 1
Q ss_pred CCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcC-CcceeEEeccCCCCCCCCCCCccc---HHHHHHH
Q psy13372 163 SSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACR-DLIGHVQIAQAPDRQEPHARGEID---YAYVFEL 238 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~-~~i~~vHi~d~~~~~~~g~~G~id---~~~i~~~ 238 (273)
....+.++++ ++.+-|.-++.+ +|.... +++... +++. +.=.++-+... +.....+ -...++.
T Consensus 193 r~a~d~l~iL---~e~g~~~~~vvi--~H~~~~-~~~~~a-~~~l~~~G~yI~f~g~------~~~~~~~~~~ra~~l~~ 259 (363)
T 3ovg_A 193 TMALEVAKHL---IGFGANPDKIQI--SHLNKN-PDKYYY-EKVIKETGVTLCFDGP------DRVKYYPDSLLAENIKY 259 (363)
T ss_dssp CSHHHHHHHH---HHHTCCGGGEEE--ECGGGS-CCHHHH-HHHHHHHCCEEEECCT------TCTTTCCHHHHHHHHHH
T ss_pred CCHHHHHHHH---HhcCCCCCcEEE--EcCCCC-CCHHHH-HHHHHHCCcEEEECCe------eccccCChhHHHHHHHH
Confidence 1233667888 776544333332 355432 344322 2222 21234444421 1101111 2345666
Q ss_pred HHHcCCCceEEEeeec
Q psy13372 239 LAREGYEGYVGLEYKP 254 (273)
Q Consensus 239 L~~~gy~g~~~lE~~~ 254 (273)
+.+.|+-..+++|...
T Consensus 260 lv~~~p~drILleTDa 275 (363)
T 3ovg_A 260 LVDKGLQKHITLSLDA 275 (363)
T ss_dssp HHHTTCGGGEEECCCC
T ss_pred HHHhcCCCeEEEeCCC
Confidence 7778888889999763
No 129
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=84.36 E-value=16 Score=29.93 Aligned_cols=36 Identities=14% Similarity=-0.008 Sum_probs=22.8
Q ss_pred CHHHHHHHH---HHcCCCeEEecCCC-C-CCCHHHHHHHHH
Q psy13372 22 NYLDKYRVA---AELGFRYIESWFPP-V-GVTLEQLVAAQT 57 (273)
Q Consensus 22 ~~~~~l~~~---~~~G~~~vEl~~~~-~-~~~~~~~~~~l~ 57 (273)
+.++.++.+ +..|.|.||++.++ . ..+.+.+.+.+.
T Consensus 30 t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~ 70 (258)
T 4h3d_A 30 NKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLY 70 (258)
T ss_dssp SHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHH
Confidence 566666554 56799999999863 2 234555555443
No 130
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=84.15 E-value=13 Score=32.18 Aligned_cols=26 Identities=12% Similarity=-0.023 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT 112 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~ 112 (273)
.+.+...++.+...|+..+.++.+..
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~ 274 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDW 274 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBT
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCc
Confidence 34566777888889999999987644
No 131
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=84.15 E-value=6.6 Score=32.86 Aligned_cols=112 Identities=7% Similarity=0.064 Sum_probs=65.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCC--------CC-------CHHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV--------GV-------TLEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFR 87 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~--------~~-------~~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~ 87 (273)
.+-++.+.+.|.+.|.+..+-. .. ...+..+.++++|+.+.. +...++.. +... ...
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~-----~~~~--~~~ 155 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCP-----YEGK--ISP 155 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBT-----TTBS--CCH
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCC-----cCCC--CCH
Confidence 4457888899999999875421 01 124456677899999863 22111111 1100 124
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+++.+.++.+..+|+..+.+.-. .+.. .+.....+++.+++-. -++.+.++.|+.
T Consensus 156 ~~~~~~~~~~~~~Ga~~i~l~DT-~G~~------~P~~~~~lv~~l~~~~-----~~~~i~~H~Hn~ 210 (298)
T 2cw6_A 156 AKVAEVTKKFYSMGCYEISLGDT-IGVG------TPGIMKDMLSAVMQEV-----PLAALAVHCHDT 210 (298)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEET-TSCC------CHHHHHHHHHHHHHHS-----CGGGEEEEEBCT
T ss_pred HHHHHHHHHHHHcCCCEEEecCC-CCCc------CHHHHHHHHHHHHHhC-----CCCeEEEEECCC
Confidence 57788888899999999988621 1121 3444555555554422 147788887653
No 132
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=84.09 E-value=19 Score=30.69 Aligned_cols=204 Identities=11% Similarity=0.023 Sum_probs=103.3
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEE-ecCCccccCCCCCchhHH---HHHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLI-NTEVDENFGYAAVKGKES---EFRASLEKTIQYAC 98 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~a~ 98 (273)
.+.++.++++|...|=...+.+ ..+.+.++++.+++|+.+.+. +.+.. .......+.... ..++.+...+..-.
T Consensus 66 ~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~-~~~~~~~~~~~~~~~~~~~~L~~~~~~e~ 144 (339)
T 3gtx_A 66 TETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYE-GGGATTYFKFRASLGDAESEIYEMMRTEV 144 (339)
T ss_dssp HHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCT-TTSSCHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCcc-CccCCcCCcccccccCCHHHHHHHHHHHH
Confidence 3456677888987765444421 368899999999999987643 22210 000000111111 12344444433222
Q ss_pred HcCCC-----eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 99 ALNIP-----AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 99 ~lG~~-----~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
..|+. ...+-.|.. .. ...+.-.+.++.-+++|++.|..+.++.-. + ....+.++++
T Consensus 145 ~~gIg~tg~k~g~IEigld-~~--------~~~~~q~~~f~aq~~lA~~~glPViiH~~~-----g---r~a~~~~~iL- 206 (339)
T 3gtx_A 145 TEGIAGTGIRAGVIKLASS-RD--------AITPYEQLFFRAAARVQRETGVPIITHTQE-----G---QQGPQQAELL- 206 (339)
T ss_dssp HTCSTTSSCCCSEEEEECC-SS--------CCCHHHHHHHHHHHHHHHHHCCCEEEECST-----T---CCHHHHHHHH-
T ss_pred HhcccccCcccceEEEEcC-CC--------CCCHHHHHHHHHHHHHHHHHCCeEEEeCCC-----C---cCHHHHHHHH-
Confidence 22222 111122211 10 112344567888889999999999999721 1 2333467888
Q ss_pred HHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCC-CCCCCCcccHHHHHHHHHHcCCCceEEEee
Q psy13372 174 ELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQ-EPHARGEIDYAYVFELLAREGYEGYVGLEY 252 (273)
Q Consensus 174 ~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~-~~g~~G~id~~~i~~~L~~~gy~g~~~lE~ 252 (273)
++.+.|.-++. +.|.... +++ +..+++.+.=.++-+.-. +.. ..+......-..-++.+.+.++...+++|.
T Consensus 207 --~~~~~~~~~~v--i~H~~~~-~~~-e~a~~~l~~G~~i~~~g~-~t~~~~~~p~~~~~~~~l~~li~~~~~drilleT 279 (339)
T 3gtx_A 207 --TSLGADPARIM--IGHMDGN-TDP-AYHRETLRHGVSIAFDRI-GLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSH 279 (339)
T ss_dssp --HHTTCCGGGEE--ECCGGGC-CCH-HHHHHHHTTTCEEEECCT-TCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECC
T ss_pred --HHcCCCcccEE--EEccCCC-CCH-HHHHHHHHcCcEEEEccC-ccccccCCCchHHHHHHHHHHHHhcCCCeEEEec
Confidence 77655543332 3576543 344 444444444445554432 110 000001112233456666778888899985
Q ss_pred e
Q psy13372 253 K 253 (273)
Q Consensus 253 ~ 253 (273)
.
T Consensus 280 D 280 (339)
T 3gtx_A 280 D 280 (339)
T ss_dssp C
T ss_pred C
Confidence 4
No 133
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=84.01 E-value=14 Score=31.62 Aligned_cols=127 Identities=9% Similarity=-0.093 Sum_probs=72.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia-Gvg------~~s--------t~eai~ 117 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLI-GTG------GTN--------ARETIE 117 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------SSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------CCC--------HHHHHH
Confidence 3667788888999999998875321 122 22233333332 44432 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.++ ++.++.|.+-|.+.. ...--+++...+|.
T Consensus 118 la~~A~~~Gadavlv~~P~Y~~~---------s~~~l~~~f~~VA---~a~~lPiilYn~P~~---tg~~l~~e~~~~La 182 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINPYYWKV---------SEANLIRYFEQVA---DSVTLPVMLYNFPAL---TGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHTCSEEEEECCSSSCC---------CHHHHHHHHHHHH---HTCSSCEEEEECHHH---HSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHHH---HhcCCCEEEEeCchh---cCcCCCHHHHHHHH
Confidence 77788899999876644332111 2356666676654 455788889886421 11233566777777
Q ss_pred HHHhhcCCCce
Q psy13372 173 RELRAHGISNV 183 (273)
Q Consensus 173 ~~~~~~~~~~~ 183 (273)
+++ ||+
T Consensus 183 ---~~~--pnI 188 (343)
T 2v9d_A 183 ---DSR--SNI 188 (343)
T ss_dssp ---HHC--TTE
T ss_pred ---HhC--CCE
Confidence 654 774
No 134
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=83.82 E-value=2.1 Score=35.59 Aligned_cols=72 Identities=7% Similarity=0.017 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCC---C-CC-CCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKTESSR---T-QP-IASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~---~-~~-~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
......+.+++.++.++++|+..|+++.+...... . .. ......-+...+.+.+++++|.++||.+.++.+.
T Consensus 36 ~~~~~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~ 112 (351)
T 3vup_A 36 QWQRNKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWN 112 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCcCCHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 34445677889999999999999999643221100 0 00 0001111245667889999999999998887653
No 135
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=83.79 E-value=2.9 Score=35.98 Aligned_cols=65 Identities=14% Similarity=0.102 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCC-CCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTE-SSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~-~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+.+++.++.++++|++.|+++..... ...- ++.+...-+...+.|.++++.|+++||.+.++.+.
T Consensus 42 ~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~-~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l~~ 107 (373)
T 1rh9_A 42 IKVTNTFQQASKYKMNVARTWAFSHGGSRPL-QSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSLVN 107 (373)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESSCSSSSSCS-EEETTEECHHHHHHHHHHHHHHHHTTCEEEEECCB
T ss_pred HHHHHHHHHHHHCCCCEEEECeecCCCCccc-cCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 46778899999999999999643211 1100 00012223567788999999999999999998653
No 136
>2oo0_A ODC, ornithine decarboxylase; beta-alpha barrel, sheet, lyase; HET: PLP; 1.90A {Homo sapiens}
Probab=83.43 E-value=16 Score=32.76 Aligned_cols=94 Identities=10% Similarity=0.086 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
.++.+.+++.||++..++++.+.. . .+.+.....++.++..++.+.++|.+ .+.+ .|+.+.... ....++
T Consensus 188 ~~~~~~~~~~~l~l~Glh~H~gs~--~-~~~~~~~~a~~~~~~~~~~~~~~G~~~~~ldi-GGG~~~~~~----~~~~~~ 259 (471)
T 2oo0_A 188 RLLLERAKELNIDVVGVSFHVGSG--C-TDPETFVQAISDARCVFDMGAEVGFSMYLLDI-GGGFPGSED----VKLKFE 259 (471)
T ss_dssp HHHHHHHHHTTCEEEEEEECCCBS--C-CCTHHHHHHHHHHHHHHHHHHHHTCCCCEEEC-CCCCCSSSS----SSSCHH
T ss_pred HHHHHHHHhCCCcEEEEEEeCCCC--C-CCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEE-CCCcCCCCC----CCCCHH
Confidence 344455666799999888765411 1 24555566777788888888888865 4444 333422211 122356
Q ss_pred HHHHHHHHHHHHHh--hCCcEEEEcc
Q psy13372 128 TLKENLIYACAELE--RHSLTALIEP 151 (273)
Q Consensus 128 ~~~~~l~~l~~~a~--~~gv~i~lE~ 151 (273)
...+.++...+..- ..++++.+||
T Consensus 260 ~~~~~i~~~l~~~~p~~~~~~li~Ep 285 (471)
T 2oo0_A 260 EITGVINPALDKYFPSDSGVRIIAEP 285 (471)
T ss_dssp HHHHHHHHHHHHHSCGGGTCEEEECC
T ss_pred HHHHHHHHHHHHHhcccCCcEEEecC
Confidence 66677776655432 2578999998
No 137
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=83.42 E-value=6.3 Score=34.41 Aligned_cols=100 Identities=8% Similarity=0.009 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.+..++++|++-|-+..|.. .+ ..++++.+.+.|..++.+.- +. + +.. ...+.++.++.
T Consensus 41 v~QI~~L~~aG~eiVRvaVp~~-~~A~al~~I~~~l~~~~~~vPLVAD-iH----F--~~~-------~al~a~~~~a~- 104 (406)
T 4g9p_A 41 TAQVLELHRAGSEIVRLTVNDE-EAAKAVPEIKRRLLAEGVEVPLVGD-FH----F--NGH-------LLLRKYPKMAE- 104 (406)
T ss_dssp HHHHHHHHHHTCSEEEEECCSH-HHHHHHHHHHHHHHHTTCCCCEEEE-CC----S--SHH-------HHHHHCHHHHH-
T ss_pred HHHHHHHHHcCCCEEEEecCCH-HHHHhHHHHHHHHHhcCCCCceEee-ec----c--cHH-------HHHHHHHHHHh-
Confidence 3445667789999999998843 33 45666667777877765431 11 1 111 11122223222
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
++..+++.||+.+.. +..-+.++++++.|+++|+.|-|=
T Consensus 105 ~~dkiRINPGNig~~-----------~k~~e~~~~vv~~ak~~~~pIRIG 143 (406)
T 4g9p_A 105 ALDKFRINPGTLGRG-----------RHKDEHFAEMIRIAMDLGKPVRIG 143 (406)
T ss_dssp HCSEEEECTTSSCST-----------HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHhhcccCccccCcc-----------ccHHHHHHHHHHHHHHccCCceec
Confidence 678999999988543 123356788899999999654443
No 138
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=83.36 E-value=18 Score=29.87 Aligned_cols=183 Identities=14% Similarity=-0.013 Sum_probs=109.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCC---CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP---PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~---~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
++.+..+...+.|.++|.+... +. .+.+.++++.+..++.+..=. + . .++. .+..|.
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~-Gs~~~L~~ir~~v~lPVl~Kd------f-i-~d~~-----------qi~ea~ 139 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQ-GAPEFLTAARQACSLPALRKD------F-L-FDPY-----------QVYEAR 139 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTC-CCHHHHHHHHHTSSSCEEEES------C-C-CSTH-----------HHHHHH
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccC-CCHHHHHHHHHhcCCCEEECC------c-c-CCHH-----------HHHHHH
Confidence 7788888888899999987643 22 466677666666666654211 1 1 1221 266678
Q ss_pred HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 99 ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.+||..|.+.....+ -+.++++.+.++..|+.+.+|.+ |.+++.+.+ ..
T Consensus 140 ~~GAD~VlLi~a~L~----------------~~~l~~l~~~a~~lGl~~lvevh-----------~~eEl~~A~----~~ 188 (272)
T 3tsm_A 140 SWGADCILIIMASVD----------------DDLAKELEDTAFALGMDALIEVH-----------DEAEMERAL----KL 188 (272)
T ss_dssp HTTCSEEEEETTTSC----------------HHHHHHHHHHHHHTTCEEEEEEC-----------SHHHHHHHT----TS
T ss_pred HcCCCEEEEcccccC----------------HHHHHHHHHHHHHcCCeEEEEeC-----------CHHHHHHHH----hc
Confidence 899999988654331 13578888999999999999963 466665555 45
Q ss_pred CCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee-cCCC
Q psy13372 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK-PQGN 257 (273)
Q Consensus 179 ~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~-~~~~ 257 (273)
+.+-+|++-=-.+ ..+.|+.. ..++.+.+. . +...... |-|.-.+-++.+.+.|++|.++-|-. ...+
T Consensus 189 ga~iIGinnr~l~--t~~~dl~~-~~~L~~~ip----~---~~~vIae-sGI~t~edv~~l~~~Ga~gvLVG~almr~~d 257 (272)
T 3tsm_A 189 SSRLLGVNNRNLR--SFEVNLAV-SERLAKMAP----S---DRLLVGE-SGIFTHEDCLRLEKSGIGTFLIGESLMRQHD 257 (272)
T ss_dssp CCSEEEEECBCTT--TCCBCTHH-HHHHHHHSC----T---TSEEEEE-SSCCSHHHHHHHHTTTCCEEEECHHHHTSSC
T ss_pred CCCEEEECCCCCc--cCCCChHH-HHHHHHhCC----C---CCcEEEE-CCCCCHHHHHHHHHcCCCEEEEcHHHcCCcC
Confidence 6666888721111 11223322 222222221 0 1111222 34433444466778999999998854 4567
Q ss_pred hHHHHHHHH
Q psy13372 258 TKEGLEEFL 266 (273)
Q Consensus 258 ~~~~~~~~~ 266 (273)
+.+.+++++
T Consensus 258 ~~~~~~~l~ 266 (272)
T 3tsm_A 258 VAAATRALL 266 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888887443
No 139
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=83.12 E-value=19 Score=29.96 Aligned_cols=128 Identities=12% Similarity=0.008 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 86 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIA-GTG------GNA--------THEAVH 86 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------CCC--------HHHHHH
Confidence 4677788888999999998875321 122 22233333333 43332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++ +.++.+.+-|.+.. ...--+++...++.
T Consensus 87 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~va~---a~~lPiilYn~P~~---tg~~l~~~~~~~La 151 (294)
T 2ehh_A 87 LTAHAKEVGADGALVVVPYYNKP---------TQRGLYEHFKTVAQ---EVDIPIIIYNIPSR---TCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC---------CHHHHHHHHHHHHH---HCCSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHHHH---hcCCCEEEEeCCcc---cCcCCCHHHHHHHH
Confidence 77778899999876644332111 23566777766654 45788888886421 11234667777777
Q ss_pred HHHhhcCCCcee
Q psy13372 173 RELRAHGISNVQ 184 (273)
Q Consensus 173 ~~~~~~~~~~~g 184 (273)
++. ||+-
T Consensus 152 ---~~~--pniv 158 (294)
T 2ehh_A 152 ---SEC--ENIV 158 (294)
T ss_dssp ---HHC--TTEE
T ss_pred ---hhC--CCEE
Confidence 664 7743
No 140
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=83.01 E-value=19 Score=29.87 Aligned_cols=128 Identities=9% Similarity=0.000 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.+++=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg------~~~--------t~~ai~ 86 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIA-GAG------SNC--------TEEAIE 86 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CCC--------HHHHHH
Confidence 4677788888999999999875321 122 22233333333 33332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.+.++++.+++ +.++.+.+-|.+.. ...--+++...++.
T Consensus 87 la~~a~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~ia~---a~~lPiilYn~P~~---tg~~l~~~~~~~La 151 (289)
T 2yxg_A 87 LSVFAEDVGADAVLSITPYYNKP---------TQEGLRKHFGKVAE---SINLPIVLYNVPSR---TAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC---------CHHHHHHHHHHHHH---HCSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHHHH---hcCCCEEEEeCccc---cCcCCCHHHHHHHH
Confidence 77788899999876644332111 23566777766654 45788888886421 11233667777777
Q ss_pred HHHhhcCCCcee
Q psy13372 173 RELRAHGISNVQ 184 (273)
Q Consensus 173 ~~~~~~~~~~~g 184 (273)
++. ||+-
T Consensus 152 ---~~~--pniv 158 (289)
T 2yxg_A 152 ---EEY--SNIS 158 (289)
T ss_dssp ---HHC--TTEE
T ss_pred ---HhC--CCEE
Confidence 664 7743
No 141
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=82.61 E-value=4.6 Score=33.63 Aligned_cols=131 Identities=9% Similarity=-0.026 Sum_probs=78.6
Q ss_pred cCHHHHHHHHHHc--CCCeEEecCCCCCCCHHHHHHHHH--Hc--CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAEL--GFRYIESWFPPVGVTLEQLVAAQT--RH--GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 21 ~~~~~~l~~~~~~--G~~~vEl~~~~~~~~~~~~~~~l~--~~--gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
.++.+.++.+++. ||.+|=+. | ..++..++.++ .. ++.+.+...+ ..|.. .. +.-..-+
T Consensus 48 ~dI~~lc~eA~~~~~~~aaVCV~-p---~~V~~a~~~L~~~gs~~~v~v~tVigF---P~G~~-~~-------~~Kv~E~ 112 (281)
T 2a4a_A 48 DDIRELCNESVKTCPFAAAVCVY-P---KFVKFINEKIKQEINPFKPKIACVINF---PYGTD-SM-------EKVLNDT 112 (281)
T ss_dssp HHHHHHHHHHHSSSSCCSEEEEC-G---GGHHHHHHHHHHHSSSCCSEEEEEEST---TTCCS-CH-------HHHHHHH
T ss_pred HHHHHHHHHHHhccCCccEEEEC-H---HHHHHHHHHhhccCCCCCceEEEEeCC---CCCCC-CH-------HHHHHHH
Confidence 3567778888889 99999875 2 34566677777 34 5777665322 12221 11 1222345
Q ss_pred HHHHHcCCCeEEecC--CCCCCCCCCCCCCcchHH---HHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHH---
Q psy13372 95 QYACALNIPAIHIMS--GKTESSRTQPIASEDPYT---TLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFR--- 166 (273)
Q Consensus 95 ~~a~~lG~~~i~~~~--G~~~~~~~~~~~~~~~~~---~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~--- 166 (273)
+.|-+.||.-|-+.. |.. ....++ .+.+-++++.+.+...-+++.||+. ++.+.+
T Consensus 113 ~~Av~~GAdEIDmVinig~l---------ksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~--------~L~d~e~i~ 175 (281)
T 2a4a_A 113 EKALDDGADEIDLVINYKKI---------IENTDEGLKEATKLTQSVKKLLTNKILKVIIEVG--------ELKTEDLII 175 (281)
T ss_dssp HHHHHHTCSEEEEECCHHHH---------HHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHH--------HHCSHHHHH
T ss_pred HHHHHcCCCEEEEecchHhh---------hCCChhHHHHHHHHHHHHHHHhcCCceEEEEecc--------cCCcHHHHH
Confidence 566678999885543 322 123455 7777777777777654467899983 455554
Q ss_pred HHHHHHHHHhhcCCCceeEe
Q psy13372 167 VAERLIRELRAHGISNVQLQ 186 (273)
Q Consensus 167 ~~~~li~~~~~~~~~~~g~~ 186 (273)
.+.++. .+.+...++..
T Consensus 176 ~A~~ia---~eaGADfVKTS 192 (281)
T 2a4a_A 176 KTTLAV---LNGNADFIKTS 192 (281)
T ss_dssp HHHHHH---HTTTCSEEECC
T ss_pred HHHHHH---HHhCCCEEEeC
Confidence 445555 66665555544
No 142
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=82.49 E-value=21 Score=30.15 Aligned_cols=180 Identities=11% Similarity=0.044 Sum_probs=91.7
Q ss_pred HHHHHHHHHHcCCCeEEecCCC-CCC---------CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPP-VGV---------TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~-~~~---------~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
..+.++.+.++|++.||++++- +.. +.+.++.+.+..+..+..+... . + ..++ .+++
T Consensus 26 k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~-~-~----~~~~-------dv~~ 92 (320)
T 3dxi_A 26 VDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNE-K-N----TTPE-------DLNH 92 (320)
T ss_dssp HHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEG-G-G----CCGG-------GHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecC-C-C----CChh-------hHHH
Confidence 3445566678899999999642 111 2355555544567777766321 1 1 1121 1112
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCCCCCCcccCCHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
. ..+...|+..+++.. . .. . ++...++++.|+++|+. ..+|...+. .+++..+.
T Consensus 93 ~-~~a~~~Gvd~~ri~~-----~------~~-n----le~~~~~v~~ak~~G~~v~~~~~~~~~~-------~~~~~~l~ 148 (320)
T 3dxi_A 93 L-LLPIIGLVDMIRIAI-----D------PQ-N----IDRAIVLAKAIKTMGFEVGFNVMYMSKW-------AEMNGFLS 148 (320)
T ss_dssp H-HGGGTTTCSEEEEEE-----C------GG-G----HHHHHHHHHHHHTTTCEEEEEECCTTTG-------GGSTTSGG
T ss_pred H-HHhhhcCCCEEEEEe-----c------HH-H----HHHHHHHHHHHHHCCCEEEEEEEeCCCC-------CCHHHHHH
Confidence 1 122347899888863 1 11 1 45566778889999965 445532221 11112233
Q ss_pred HHHHHhhcCC-CceeEeeecccccccC--CChHHHHHhcCCcceeEEeccCCCC--------------------CCC--C
Q psy13372 171 LIRELRAHGI-SNVQLQFDFFNAQRIC--GDLTHTFGACRDLIGHVQIAQAPDR--------------------QEP--H 225 (273)
Q Consensus 171 li~~~~~~~~-~~~g~~~D~~h~~~~~--~~~~~~i~~~~~~i~~vHi~d~~~~--------------------~~~--g 225 (273)
.+ .+++. ...=-.-|+.-..... ..+...+++..+-..++|.+|+.+. ... +
T Consensus 149 ~~---~~~~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~ 225 (320)
T 3dxi_A 149 KL---KAIDKIADLFCMVDSFGGITPKEVKNLLKEVRKYTHVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRG 225 (320)
T ss_dssp GG---GGGTTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCCSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSST
T ss_pred HH---HHhhCCCCEEEECcccCCCCHHHHHHHHHHHHHhCCCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCc
Confidence 33 33321 1122223543332211 0122333333344578898886432 012 2
Q ss_pred CCCcccHHHHHHHHHHcCC
Q psy13372 226 ARGEIDYAYVFELLAREGY 244 (273)
Q Consensus 226 ~~G~id~~~i~~~L~~~gy 244 (273)
. |..+...++..|+. +|
T Consensus 226 ~-GN~~~E~lv~~L~~-~~ 242 (320)
T 3dxi_A 226 A-GNLKMELLLTYLNK-HH 242 (320)
T ss_dssp T-CBCBHHHHHHHHHH-HS
T ss_pred c-cchhHHHHHHHHHh-cc
Confidence 4 99999999999997 44
No 143
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=82.19 E-value=2.5 Score=34.63 Aligned_cols=99 Identities=13% Similarity=0.029 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc
Q psy13372 83 ESEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY 161 (273)
Q Consensus 83 ~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~ 161 (273)
.....+.++++++.|..+|++++++..-.. ++.++ +......++-+.+.|.+..+...+.||++-+=- . ...+
T Consensus 50 H~~G~~~~~~iv~~c~~lGI~~lTlYaFStENwkRp-~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iG--d---~~~L 123 (256)
T 4h8e_A 50 HYEGMQTIKKITRIASDIGVKYLTLYAFSTENWSRP-ESEVNYIMNLPVNFLKTFLPELIEKNVKVETIG--F---TDKL 123 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEETTGGGSC-HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEES--C---GGGS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEEEchhhhCCC-HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEec--C---cccC
Confidence 445678899999999999999999875432 22221 000112244455667777777889999887542 1 1112
Q ss_pred cCCHHHHHHHHHHHhhcCCCceeEeeecc
Q psy13372 162 LSSFRVAERLIRELRAHGISNVQLQFDFF 190 (273)
Q Consensus 162 ~~~~~~~~~li~~~~~~~~~~~g~~~D~~ 190 (273)
++...+.+++.++....+=|+++.++
T Consensus 124 ---p~~~~~~i~~ae~~T~~n~~~~lnia 149 (256)
T 4h8e_A 124 ---PKSTIEAINNAKEKTANNTGLKLIFA 149 (256)
T ss_dssp ---CHHHHHHHHHHHHHTTTCCSCEEEEE
T ss_pred ---CHHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 33444444333444444445555543
No 144
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=82.04 E-value=23 Score=30.11 Aligned_cols=131 Identities=11% Similarity=-0.082 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia-Gvg------~~s--------t~eai~ 120 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA-GIG------ALR--------TDEAVA 120 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-EEC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------CCC--------HHHHHH
Confidence 3667788888999999998875321 122 22333333333 44332 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... ..+.++++++.+++ +.++.+.+-|.+.. ...--+++...+|.
T Consensus 121 la~~A~~~Gadavlv~~P~Y~~~---------s~~~l~~~f~~VA~---a~~lPiilYn~P~~---tg~~l~~e~~~~La 185 (332)
T 2r8w_A 121 LAKDAEAAGADALLLAPVSYTPL---------TQEEAYHHFAAVAG---ATALPLAIYNNPTT---TRFTFSDELLVRLA 185 (332)
T ss_dssp HHHHHHHHTCSEEEECCCCSSCC---------CHHHHHHHHHHHHH---HCSSCEEEECCHHH---HCCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHHHH---hcCCCEEEEeCccc---cCcCCCHHHHHHHH
Confidence 77778889999886654333111 23566777766654 45788888886421 11233566666666
Q ss_pred HHHhhcCCCceeEeee
Q psy13372 173 RELRAHGISNVQLQFD 188 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D 188 (273)
+ .||+--.=|
T Consensus 186 ---~---~pnIvgiKd 195 (332)
T 2r8w_A 186 ---Y---IPNIRAIKM 195 (332)
T ss_dssp ---T---STTEEEEEE
T ss_pred ---c---CCCEEEEEe
Confidence 4 377543334
No 145
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=82.01 E-value=9.1 Score=31.21 Aligned_cols=99 Identities=15% Similarity=0.044 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc
Q psy13372 83 ESEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY 161 (273)
Q Consensus 83 ~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~ 161 (273)
.....+.+++.++.|..+|++++++..... ++.++ +......++.+.+.|++..+...+.||++-+= +. ...+
T Consensus 46 H~~G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp-~~EV~~Lm~l~~~~l~~~~~~l~~~~vr~~~i--G~---~~~l 119 (249)
T 1f75_A 46 HYEGMQTVRKITRYASDLGVKYLTLYAFSTENWSRP-KDEVNYLMKLPGDFLNTFLPELIEKNVKVETI--GF---IDDL 119 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEEC-------------CGGGTHHHHHHHHHHHHHHHTTCEEEEE--SC---GGGS
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEEEecccccCCC-HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEe--CC---hhhC
Confidence 344678999999999999999999975322 12221 11134456667777888777777889887752 21 1112
Q ss_pred cCCHHHHHHHHHHHhhcCCCceeEeeecc
Q psy13372 162 LSSFRVAERLIRELRAHGISNVQLQFDFF 190 (273)
Q Consensus 162 ~~~~~~~~~li~~~~~~~~~~~g~~~D~~ 190 (273)
+++..+.+++.++....+=++++.++
T Consensus 120 ---p~~~~~~i~~~~~~T~~n~~l~lnia 145 (249)
T 1f75_A 120 ---PDHTKKAVLEAKEKTKHNTGLTLVFA 145 (249)
T ss_dssp ---CHHHHHHHHHHHHTTTTCCSCEEEEE
T ss_pred ---CHHHHHHHHHHHHhhcCCCceEEEEE
Confidence 22333334222555445555555554
No 146
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=81.84 E-value=19 Score=29.10 Aligned_cols=138 Identities=13% Similarity=0.017 Sum_probs=74.5
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeE-EEecCCccccCCCCCc--hhHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQV-LINTEVDENFGYAAVK--GKESEFRASLEKTIQYA 97 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~a 97 (273)
.+.++.++.+++.|.+.+=...... .+.+.+.++.++++..+. +++.... . ...... +.....++.+.+.++..
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~l~~~~~~~i~~~~GihP~-~-~~~~~~~~~~~~~~~~~l~~~~~~~ 96 (272)
T 2y1h_A 20 RDLDDVLEKAKKANVVALVAVAEHS-GEFEKIMQLSERYNGFVLPCLGVHPV-Q-GLPPEDQRSVTLKDLDVALPIIENY 96 (272)
T ss_dssp TTHHHHHHHHHHTTEEEEEECCSSG-GGHHHHHHHHHHTTTTEEEEECCCSB-C--------CBCCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHHHHHHCCCCEEEEEEECCC-c-cccccccccCCHHHHHHHHHHHHhC
Confidence 4789999999999998765443322 456778888888885443 4433211 1 000000 00112344444444321
Q ss_pred HHcCCCeEEecCCCCCC-CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 98 CALNIPAIHIMSGKTES-SRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 98 ~~lG~~~i~~~~G~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
. -.+..|.- .|-... ... ......+...+.+++..++|+++|+.+.++.- ...++.++++ +
T Consensus 97 ~-~~~~~iGE-~Gld~~~~~~---~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~----------~a~~~~~~il---~ 158 (272)
T 2y1h_A 97 K-DRLLAIGE-VGLDFSPRFA---GTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR----------SAGRPTINLL---Q 158 (272)
T ss_dssp G-GGCSEEEE-EECCCCTTTC---CSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT----------TCHHHHHHHH---H
T ss_pred C-CCEEEEEe-ccCCCccccC---CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC----------CcHHHHHHHH---H
Confidence 1 11222211 121100 000 01123455678899999999999999999972 1346677888 7
Q ss_pred hcC
Q psy13372 177 AHG 179 (273)
Q Consensus 177 ~~~ 179 (273)
+.+
T Consensus 159 ~~~ 161 (272)
T 2y1h_A 159 EQG 161 (272)
T ss_dssp HTT
T ss_pred hCC
Confidence 763
No 147
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=81.82 E-value=5.1 Score=32.98 Aligned_cols=130 Identities=9% Similarity=-0.026 Sum_probs=78.4
Q ss_pred CHHHHHHHHHHc--CCCeEEecCCCCCCCHHHHHHHHH--Hc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAEL--GFRYIESWFPPVGVTLEQLVAAQT--RH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l~~~~~~--G~~~vEl~~~~~~~~~~~~~~~l~--~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
++.+.++.+++. ||.+|=+. | ..++..++.++ .. ++.+.+...+ ..|.. .. +.-..-++.
T Consensus 29 ~i~~lc~eA~~~~~~~~aVcV~-p---~~v~~a~~~L~~~g~~~v~v~tVigF---P~G~~-~~-------~~Kv~E~~~ 93 (260)
T 1p1x_A 29 KVIALCHQAKTPVGNTAAICIY-P---RFIPIARKTLKEQGTPEIRIATVTNF---PHGND-DI-------DIALAETRA 93 (260)
T ss_dssp HHHHHHHHTEETTEECSEEECC-G---GGHHHHHHHHHHTTCTTSEEEEEEST---TTCCS-CH-------HHHHHHHHH
T ss_pred HHHHHHHHHHhccCCceEEEEC-H---HHHHHHHHHhhhcCCCCceEEEEeCC---CCCCC-cH-------HHHHHHHHH
Confidence 456666677777 89998764 2 34666777787 34 6777765322 12221 11 122234556
Q ss_pred HHHcCCCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHH---HHH
Q psy13372 97 ACALNIPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFR---VAE 169 (273)
Q Consensus 97 a~~lG~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~---~~~ 169 (273)
|-+.||.-|-+. .|.... ..++.+.+-++++.+.+..+| +++.||+. ++.+.+ .+.
T Consensus 94 Av~~GAdEIDmVinig~l~~---------g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~--------~L~d~e~i~~a~ 156 (260)
T 1p1x_A 94 AIAYGADEVDVVFPYRALMA---------GNEQVGFDLVKACKEACAAANVLLKVIIETG--------ELKDEALIRKAS 156 (260)
T ss_dssp HHHHTCSEEEEECCHHHHHT---------TCCHHHHHHHHHHHHHHHHTTCEEEEECCHH--------HHCSHHHHHHHH
T ss_pred HHHcCCCEEEEeccHHhhhC---------CCHHHHHHHHHHHHHHhcccCCeEEEEEecc--------cCCcHHHHHHHH
Confidence 667899987554 333212 235677778888888887655 56799983 455554 455
Q ss_pred HHHHHHhhcCCCceeEe
Q psy13372 170 RLIRELRAHGISNVQLQ 186 (273)
Q Consensus 170 ~li~~~~~~~~~~~g~~ 186 (273)
++. .+.+...++..
T Consensus 157 ~ia---~eaGADfVKTS 170 (260)
T 1p1x_A 157 EIS---IKAGADFIKTS 170 (260)
T ss_dssp HHH---HHTTCSEEECC
T ss_pred HHH---HHhCCCEEEeC
Confidence 666 77666655554
No 148
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=81.69 E-value=25 Score=30.84 Aligned_cols=94 Identities=11% Similarity=0.098 Sum_probs=56.8
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
.++.+.+++.+|.+..++++.+.. . .+++.....++.+++.++.+..+|.+ .+.+ .|+.+.... ....++
T Consensus 178 ~~~~~~~~~~~l~~~Gl~~H~gs~--~-~~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~i-GGG~~~~~~----~~~~~~ 249 (425)
T 1f3t_A 178 RFILEQAKKLNIDVTGVSFHVGSG--S-TDASTFAQAISDSRFVFDMGTELGFNMHILDI-GGGFPGTRD----APLKFE 249 (425)
T ss_dssp HHHHHHHHHTTCEEEEEECCCCSC--C-SCTHHHHHHHHHHHHHHHHHHHTTCCCCEEEC-CCCCCSSTT----SSSCHH
T ss_pred HHHHHHHHhCCCeEEEEEEeCCCC--C-CCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEe-CCCcCCCCC----CCCCHH
Confidence 344455666799999888765311 1 24555666677788888888888875 3444 333322211 122356
Q ss_pred HHHHHHHHHHHHHh--hCCcEEEEcc
Q psy13372 128 TLKENLIYACAELE--RHSLTALIEP 151 (273)
Q Consensus 128 ~~~~~l~~l~~~a~--~~gv~i~lE~ 151 (273)
...+.++......- ..|+++.+||
T Consensus 250 ~~~~~vr~~i~~~~~~~~~~~l~~Ep 275 (425)
T 1f3t_A 250 EIAGVINNALEKHFPPDLKLTIVAEP 275 (425)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEECC
T ss_pred HHHHHHHHHHHHhcCcCCCcEEEEeC
Confidence 66677776655442 2368999997
No 149
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=81.55 E-value=5 Score=35.51 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCC------CC-CCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTES------SR-TQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~------~~-~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+.+++.++.++++|++.|+++ +.... .+ ..+..+...-+...+.|.++++.|+++||.+.++.+
T Consensus 62 ~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 62 DRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 467788999999999999997 21100 00 000012222356778899999999999999999865
No 150
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=81.51 E-value=18 Score=28.67 Aligned_cols=85 Identities=7% Similarity=-0.037 Sum_probs=49.5
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecC---CC--C-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCC
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWF---PP--V-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAA 78 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~---~~--~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~ 78 (273)
+.+|+-+. +...-. ++.+.++.+.+.|.|.|++.. ++ . ....+.++++.+.....+.. ++. . .
T Consensus 6 ~~~i~psi-~a~d~~--~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v-~lm------v-~ 74 (228)
T 1h1y_A 6 AAKIAPSM-LSSDFA--NLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDC-HLM------V-T 74 (228)
T ss_dssp CCEEEEBG-GGSCGG--GHHHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEE-EEE------S-S
T ss_pred CCeEEEEe-eeCCHH--HHHHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhcCCcEEE-EEE------e-c
Confidence 34565444 232323 789999999999999999883 11 1 12355555544333333332 221 1 2
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCC
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSG 110 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G 110 (273)
+++ +.++.+...|+..+++|.+
T Consensus 75 d~~----------~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 75 NPS----------DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp CGG----------GGHHHHHHHTCSEEEEEGG
T ss_pred CHH----------HHHHHHHHcCCCEEEECCC
Confidence 331 2466666689999999964
No 151
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=81.36 E-value=8.4 Score=31.02 Aligned_cols=134 Identities=7% Similarity=-0.051 Sum_probs=71.1
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.++.+.+.|.+.+=+..... .+.+.+.++.++++--+.+++.. +.. .++. ..++.+++.++.
T Consensus 20 ~~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~~~~~~p~~~~~~g~h----P~~--~~~~--~~~~~l~~~~~~---- 86 (265)
T 1yix_A 20 KDVDDVLAKAAARDVKFCLAVATTL-PSYLHMRDLVGERDNVVFSCGVH----PLN--QNDP--YDVEDLRRLAAE---- 86 (265)
T ss_dssp SSHHHHHHHHHHTTEEEEEECCSSH-HHHHHHHHHHCSCTTEEEEECCC----TTC--CSSC--CCHHHHHHHHTS----
T ss_pred cCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHHHHHHCCCeEEEEEeC----CCc--cccc--chHHHHHHHhcc----
Confidence 3789999999999998865433221 34456667777776322233221 101 1110 012334444321
Q ss_pred CCCeEEec-CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 101 NIPAIHIM-SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 101 G~~~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
.+.+.+. .|-. .... . .......+.+.+..++|+++|+.+.+++- ...++..+++ ++.+
T Consensus 87 -~~~~~iGe~Gl~-~~~~----~-~~~~~q~~~~~~~~~~a~~~~~pv~iH~~----------~~~~~~~~~l---~~~~ 146 (265)
T 1yix_A 87 -EGVVALGETGLD-YYYT----P-ETKVRQQESFIHHIQIGRELNKPVIVHTR----------DARADTLAIL---REEK 146 (265)
T ss_dssp -TTEEEEEEEEEE-CTTC----S-SCHHHHHHHHHHHHHHHHHHTCCEEEEEE----------SCHHHHHHHH---HHTT
T ss_pred -CCeEEEEccccC-CCcC----C-CChHHHHHHHHHHHHHHHHhCCCEEEEec----------CchHHHHHHH---HhcC
Confidence 1111110 0110 0000 1 11333456788888999999999998872 2456778888 7765
Q ss_pred CCceeEee
Q psy13372 180 ISNVQLQF 187 (273)
Q Consensus 180 ~~~~g~~~ 187 (273)
.|.+++++
T Consensus 147 ~p~~~~v~ 154 (265)
T 1yix_A 147 VTDCGGVL 154 (265)
T ss_dssp GGGTCEEE
T ss_pred CCCCCEEE
Confidence 56666664
No 152
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=81.10 E-value=21 Score=29.18 Aligned_cols=113 Identities=12% Similarity=-0.006 Sum_probs=65.6
Q ss_pred HHHHHHHHHc--CCCeEE-ecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAEL--GFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~--G~~~vE-l~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.+.+. |.+-|- ++.. . .+.+++...++++|..++.++... .|. |...+...+.+++.++.|.+.
T Consensus 79 ~~v~~aAl~a~~Ga~iINdvs~~-~-d~~~~~~~~~a~~~~~vvlmh~~~---~G~---p~t~~~~~~~~~~~~~~a~~~ 150 (262)
T 1f6y_A 79 IKAIEAGLKKCKNRAMINSTNAE-R-EKVEKLFPLAVEHGAALIGLTMNK---TGI---PKDSDTRLAFAMELVAAADEF 150 (262)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSC-H-HHHHHHHHHHHHTTCEEEEESCCS---SCS---CSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCEEEECCCC-c-ccHHHHHHHHHHhCCcEEEEcCCC---CCC---CCCHHHHHHHHHHHHHHHHHC
Confidence 3444444444 655442 3321 1 223478888999999888776521 122 223344567888999999999
Q ss_pred CCC--eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC--CcE--EEEccC
Q psy13372 101 NIP--AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH--SLT--ALIEPV 152 (273)
Q Consensus 101 G~~--~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~--i~lE~~ 152 (273)
|.+ .|.+-||..+... ..+...+.|+.+..+-+.. |.. +++=|.
T Consensus 151 Gi~~~~IilDPg~g~~g~--------~~~~~~~~l~~l~~l~~~~~pg~pvl~G~Srk 200 (262)
T 1f6y_A 151 GLPMEDLYIDPLILPANV--------AQDHAPEVLKTLQQIKMLADPAPKTVLGLSNV 200 (262)
T ss_dssp TCCGGGEEEECCCCCTTT--------CTTHHHHHHHHHHHHHTCCSSCCEEEEEGGGG
T ss_pred CCCcccEEEeCCCCcCCC--------ChHHHHHHHHHHHHHHHHhCCCCCEEEeecCC
Confidence 998 7888887642221 1134445555555555445 655 444443
No 153
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=81.00 E-value=2.1 Score=34.42 Aligned_cols=110 Identities=12% Similarity=0.044 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHH----HHHHHHHHHHHHHhhCCcEEEEccCCCCCCC
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYT----TLKENLIYACAELERHSLTALIEPVNQHSVP 158 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~----~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~ 158 (273)
....+.++++++.|..+|++++++..-.. ++.+ +++..+ -+.+.|++..+...+.||++-+=- . .
T Consensus 33 ~~G~~~~~~i~~~c~~lGI~~lTlYaFStENw~R-----p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iG--d---~ 102 (225)
T 3ugs_B 33 SQGVKTMQKLMEVCMEENISNLSLFAFSTENWKR-----PKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIG--D---L 102 (225)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEEEEEEEESGGGGS-----CHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEES--C---G
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEEEcccccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEe--C---h
Confidence 34567899999999999999999865332 2222 233333 344555565566778898876532 1 1
Q ss_pred CcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhc
Q psy13372 159 GYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC 206 (273)
Q Consensus 159 ~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~ 206 (273)
..+ +++..+.+++.++....+=|+++.++--+-...++.++++.+
T Consensus 103 ~~L---p~~~~~~i~~ae~~T~~n~~~~lnia~~YggR~EI~~A~~~i 147 (225)
T 3ugs_B 103 SRL---EDKVREKITLVEEKTKHCDALCVNLAISYGARDEIIRAAKRV 147 (225)
T ss_dssp GGS---CHHHHHHHHHHHHHHTTCCSEEEEEEEEECHHHHHHHHHHHH
T ss_pred HhC---CHHHHHHHHHHHHHhcCCCCcEEEEeeCCCCHHHHHHHHHHH
Confidence 112 334444443334443445455555543332222344444443
No 154
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=80.78 E-value=24 Score=29.66 Aligned_cols=133 Identities=9% Similarity=-0.004 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg------~~s--------t~~ai~ 108 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA-GAG------SNS--------TSEAVE 108 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CCC--------HHHHHH
Confidence 4667788888999999988875321 122 22223333332 44443 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 109 la~~A~~~Gadavlv~~P~y~~~------~---~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 173 (315)
T 3si9_A 109 LAKHAEKAGADAVLVVTPYYNRP------N---QRGLYTHFSSIAKA---ISIPIIIYNIPSR---SVIDMAVETMRDLC 173 (315)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---CSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC------C---HHHHHHHHHHHHHc---CCCCEEEEeCchh---hCCCCCHHHHHHHH
Confidence 77788899999876654333111 2 34566777666554 4789999886531 12334577777777
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+++ ||+--.=|.
T Consensus 174 ---~~~--pnIvgiKds 185 (315)
T 3si9_A 174 ---RDF--KNIIGVKDA 185 (315)
T ss_dssp ---HHC--TTEEEEEEC
T ss_pred ---hhC--CCEEEEEeC
Confidence 655 775444444
No 155
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=80.76 E-value=4.4 Score=33.04 Aligned_cols=65 Identities=9% Similarity=0.020 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
....+.+++.++.|..+|++++++..... ++.++ +......++-+.+.|.+..+...+.||++-+
T Consensus 42 ~~G~~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp-~~EV~~Lm~l~~~~l~~~~~~l~~~~vrl~~ 107 (245)
T 2d2r_A 42 KKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP-KSEVDFLMKMLKKYLKDERSTYLDNNIRFRA 107 (245)
T ss_dssp HHHHHHHHHHHHHHHTTTCSEEEEECC-----------CHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCcccCCC-HHHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence 44678999999999999999999976432 12221 0002233555667777766777789988775
No 156
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=80.69 E-value=23 Score=29.21 Aligned_cols=94 Identities=10% Similarity=0.068 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE---EEEccCCCCCCCCcccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT---ALIEPVNQHSVPGYYLSS 164 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~---i~lE~~~~~~~~~~~~~~ 164 (273)
+.+.+.++.+++.|+..|..|....+. +...+...+.+.++.+.|.++||. |.+-|.- +....+
T Consensus 112 d~~~~~~~~~a~~~~~vv~m~~d~~G~--------p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~-----gfigk~ 178 (271)
T 2yci_X 112 WKMDIFFPMAKKYEAAIIGLTMNEKGV--------PKDANDRSQLAMELVANADAHGIPMTELYIDPLI-----LPVNVA 178 (271)
T ss_dssp HHHHHHHHHHHHHTCEEEEESCBTTBC--------CCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCC-----CCTTTS
T ss_pred cccHHHHHHHHHcCCCEEEEecCCCCC--------CCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCC-----CccccC
Confidence 446778899999999999888632211 122667788899999999999997 9999842 212456
Q ss_pred HHHHHHHHHHHhhcCC---CceeEeeecccccc
Q psy13372 165 FRVAERLIRELRAHGI---SNVQLQFDFFNAQR 194 (273)
Q Consensus 165 ~~~~~~li~~~~~~~~---~~~g~~~D~~h~~~ 194 (273)
.++..++++.++.+.. |++-++.=+++-..
T Consensus 179 ~~~~~~~l~~l~~~~~~~~p~~p~l~G~Snksf 211 (271)
T 2yci_X 179 QEHAVEVLETIRQIKLMANPAPRTVLGLSNVSQ 211 (271)
T ss_dssp THHHHHHHHHHHHHTTSSSSCCEEEEEGGGGGT
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEeeCcccc
Confidence 6777777755555532 45777777776544
No 157
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=80.67 E-value=23 Score=29.40 Aligned_cols=94 Identities=10% Similarity=-0.066 Sum_probs=57.0
Q ss_pred HHHHHHHHHHcCCCeEEecC--CCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 23 YLDKYRVAAELGFRYIESWF--PPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~--~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
..+-++.++++|.++|-+.. +....+.+..+++++..+---.+++..++ ...++ ..+++....+
T Consensus 113 M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD----~~~d~----------~~Ale~Li~l 178 (287)
T 3iwp_A 113 MKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFD----MVHDP----------MAALETLLTL 178 (287)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGG----GCSCH----------HHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchh----ccCCH----------HHHHHHHHHc
Confidence 44567889999999999986 33347788888888876643333443221 11222 2345555667
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhh
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELER 142 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~ 142 (273)
|+..|-+. |..+. .. .-++.|+++.+.+..
T Consensus 179 GvdrILTS-G~~~~-------a~----~Gl~~Lk~Lv~~a~~ 208 (287)
T 3iwp_A 179 GFERVLTS-GCDSS-------AL----EGLPLIKRLIEQAKG 208 (287)
T ss_dssp TCSEEEEC-TTSSS-------TT----TTHHHHHHHHHHHTT
T ss_pred CCCEEECC-CCCCC-------hH----HhHHHHHHHHHHhCC
Confidence 99998874 43221 11 234566777776654
No 158
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=80.66 E-value=2.7 Score=34.39 Aligned_cols=137 Identities=11% Similarity=0.066 Sum_probs=74.7
Q ss_pred ccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 20 AANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 20 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
..+.++.++.+++.|.+.+=+..... .+.+.+.++.++++--+.+++.... .. ++..+..++.+++.++
T Consensus 26 ~~~~~~~l~~~~~~GV~~~v~~~~~~-~~~~~~~~l~~~~p~i~~~~G~hP~----~~--~~~~~~~~~~l~~~~~---- 94 (268)
T 1j6o_A 26 DDDRNAVISSFEENNIEFVVNVGVNL-EDSKKSLDLSKTSDRIFCSVGVHPH----DA--KEVPEDFIEHLEKFAK---- 94 (268)
T ss_dssp TTTHHHHHHTTTTTTEEEEEEECSSH-HHHHHHHHHHTTCTTEEEEECCCGG----GG--GGCCTTHHHHHHHHTT----
T ss_pred ccCHHHHHHHHHHcCCCEEEEeCCCH-HHHHHHHHHHHHCCCEEEEEeeccc----cc--cccCHHHHHHHHHHhc----
Confidence 34889999999999997665443221 3456677777787742333332111 00 1100112344444432
Q ss_pred cCCCeEEec-CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 100 LNIPAIHIM-SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 100 lG~~~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
..+.+.+. .|-. ... .........+.+++..++|+++|+.+.+++- ...+++.+++ ++.
T Consensus 95 -~~~~~~iGe~Gld-~~~-----~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~----------~~~~~~~~il---~~~ 154 (268)
T 1j6o_A 95 -DEKVVAIGETGLD-FFR-----NISPAEVQKRVFVEQIELAGKLNLPLVVHIR----------DAYSEAYEIL---RTE 154 (268)
T ss_dssp -STTEEEEEEEEEE-TTT-----CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE----------SCHHHHHHHH---HHS
T ss_pred -cCCEEEEEccccC-Ccc-----cCCChHHHHHHHHHHHHHHHHhCCCEEEEeC----------chHHHHHHHH---Hhc
Confidence 11122220 1111 100 0112344567888999999999999999872 2466778888 877
Q ss_pred CCCceeEee
Q psy13372 179 GISNVQLQF 187 (273)
Q Consensus 179 ~~~~~g~~~ 187 (273)
..+.+++.+
T Consensus 155 p~~~~~~I~ 163 (268)
T 1j6o_A 155 SLPEKRGVI 163 (268)
T ss_dssp CCCSSCEEE
T ss_pred CCCCCCEEE
Confidence 433677766
No 159
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=80.65 E-value=12 Score=31.03 Aligned_cols=91 Identities=9% Similarity=0.058 Sum_probs=54.6
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCC-cccCCHHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPG-YYLSSFRVAER 170 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~-~~~~~~~~~~~ 170 (273)
+.++..+.+|+..|+++.+... .+. . .. .+.+.++++.|.++|+.+.|+.|....... .--.+.+...+
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~-~w~----~-~~----~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~~~~~~~~~~~~ 105 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGV-RWS----K-NG----PSDVANVISLCKQNRLICMLEVHDTTGYGEQSGASTLDQAVD 105 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSS-SSC----C-CC----HHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTTCCCHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEccCCc-ccC----C-CC----HHHHHHHHHHHHHCCCEEEEEeccCCCCCCCCchhhHHHHHH
Confidence 4566677899999999754211 111 1 11 367899999999999999999865310000 00124556666
Q ss_pred HHHHH-hhc-CCCceeEeeeccccc
Q psy13372 171 LIREL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 171 li~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
+.+.+ +.. ++|++ +.+++.|-.
T Consensus 106 ~w~~ia~~~k~~~~v-v~~el~NEP 129 (302)
T 1bqc_A 106 YWIELKSVLQGEEDY-VLINIGNEP 129 (302)
T ss_dssp HHHHTHHHHTTCTTT-EEEECSSSC
T ss_pred HHHHHHHHhcCCCCE-EEEEeCCCC
Confidence 65221 333 44654 577887754
No 160
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=80.60 E-value=4.1 Score=38.02 Aligned_cols=84 Identities=12% Similarity=0.105 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCC-C--CCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSR-T--QPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~-~--~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
..+..++.|++|+++|.++|.+-.|...... + .|. ++ ..|.+|+++|++.||.|.+..... .+-
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~-p~-------~di~~l~~Ya~~kgV~i~lw~~~~-----~~~ 373 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVV-KE-------IDLKELVDYAASKNVGIILWAGYH-----AFE 373 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBC-TT-------CCHHHHHHHHHHTTCEEEEEEEHH-----HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccC-Cc-------CCHHHHHHHHHhcCCEEEEEeeCc-----chH
Confidence 4578899999999999999999666432110 0 111 11 248899999999999988876332 234
Q ss_pred CCHHHHHHHHHHHhhcCCCceeE
Q psy13372 163 SSFRVAERLIRELRAHGISNVQL 185 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~ 185 (273)
...+++.+.+ ++.+-..|++
T Consensus 374 ~~~~~~~~~~---~~~Gv~gvK~ 393 (641)
T 3a24_A 374 RDMENVCRHY---AEMGVKGFKV 393 (641)
T ss_dssp TSHHHHHHHH---HHHTCCEEEE
T ss_pred HHHHHHHHHH---HHcCCCEEEE
Confidence 4567777888 8887665444
No 161
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=80.43 E-value=22 Score=29.45 Aligned_cols=131 Identities=11% Similarity=-0.012 Sum_probs=71.7
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchh----HHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGK----ESEFRASLEKTIQY 96 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~ 96 (273)
.+.++.++.+++.|.+.+=+..... .+.+.+.++.++++--+.+++.... . ..+. .+..++.+++.+
T Consensus 27 ~d~~~vl~~~~~~GV~~~v~~~~~~-~~~~~~~~la~~~~~v~~~~GiHP~----~--~~~~~~~~~~~~~~~l~~~~-- 97 (301)
T 2xio_A 27 DDLQDVIGRAVEIGVKKFMITGGNL-QDSKDALHLAQTNGMFFSTVGCHPT----R--CGEFEKNNPDLYLKELLNLA-- 97 (301)
T ss_dssp CCHHHHHHHHHHHTEEEEEECCCSH-HHHHHHHHHHTTCTTEEEEECCCGG----G--THHHHHHCHHHHHHHHHHHH--
T ss_pred cCHHHHHHHHHHCCCCEEEEeCCCH-HHHHHHHHHHHHCCCEEEEEEECcC----h--hhhCcccccHHHHHHHHHHH--
Confidence 3789999999999998776653321 3455667777777732233332110 0 0111 112233333333
Q ss_pred HHHcCCCeEEec-CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHH
Q psy13372 97 ACALNIPAIHIM-SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIREL 175 (273)
Q Consensus 97 a~~lG~~~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~ 175 (273)
..-+.+.+.+. .|- ...+. .....+...+.+++.+++|+++|+.+.++.- ...++.++++
T Consensus 98 -~~~~~~~~aIGEiGL-d~~~~----~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r----------~a~~~~~~il--- 158 (301)
T 2xio_A 98 -ENNKGKVVAIGECGL-DFDRL----QFCPKDTQLKYFEKQFELSEQTKLPMFLHCR----------NSHAEFLDIT--- 158 (301)
T ss_dssp -HTCTTTEEEEEEEEE-ETTCT----TTSCHHHHHHHHHHTHHHHHHHCCCEEEEEE----------SCHHHHHHHH---
T ss_pred -hcCCCCeEEEEEeeC-CCCcC----CCCCHHHHHHHHHHHHHHHHHhCCcEEEEec----------CchHHHHHHH---
Confidence 32222333331 121 11100 0122355568899999999999999999972 2356778888
Q ss_pred hhcC
Q psy13372 176 RAHG 179 (273)
Q Consensus 176 ~~~~ 179 (273)
++..
T Consensus 159 ~~~~ 162 (301)
T 2xio_A 159 KRNR 162 (301)
T ss_dssp HHTG
T ss_pred Hhcc
Confidence 6653
No 162
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.24 E-value=7.1 Score=32.72 Aligned_cols=111 Identities=9% Similarity=0.056 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCCeEEecCCC-C-------CCC-------HHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPP-V-------GVT-------LEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFR 87 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~-~-------~~~-------~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~ 87 (273)
.+-++.+.+.|++.|.+...- + ..+ ..++.+.++++|+.+.. +....+... .. ....
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~-----~~--~~~~ 158 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPY-----DG--DVDP 158 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTT-----TB--CCCH
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCc-----CC--CCCH
Confidence 456778888999999986431 1 011 35666778899999863 322111111 00 0113
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEEEccCCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTALIEPVNQ 154 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~lE~~~~ 154 (273)
+++.+.++.+.++|+..+.+.. ..+.. .+.....+++.+++ .. ++.|.++.|+.
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~D-T~G~~------~P~~~~~lv~~l~~------~~~~~~l~~H~Hn~ 213 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLGD-TIGVG------TAGATRRLIEAVAS------EVPRERLAGHFHDT 213 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEE-SSSCC------CHHHHHHHHHHHTT------TSCGGGEEEEEBCT
T ss_pred HHHHHHHHHHHHcCCCEEEEeC-CCCCc------CHHHHHHHHHHHHH------hCCCCeEEEEeCCC
Confidence 5677788888899999998862 11111 22333333333332 23 57888888653
No 163
>3e2q_A Proline oxidase, proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, DNA-binding, FAD, flavoprotein, multifunctional enzyme, NAD; HET: FAD 1PE; 1.75A {Escherichia coli} PDB: 3e2r_A* 3e2s_A* 1tj2_A* 1tiw_A* 1tj0_A* 1tj1_A* 2fzm_A* 2fzn_A* 3itg_A*
Probab=80.19 E-value=13 Score=33.91 Aligned_cols=121 Identities=11% Similarity=0.109 Sum_probs=69.6
Q ss_pred HHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC-------CCeEEecCCCCCCCCCCCCCCcchH
Q psy13372 54 AAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN-------IPAIHIMSGKTESSRTQPIASEDPY 126 (273)
Q Consensus 54 ~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG-------~~~i~~~~G~~~~~~~~~~~~~~~~ 126 (273)
+.+++.|+.++ +..- ++. ..+++..+...+.+..+|+....-+ ...|.+-+.......+ +...+...
T Consensus 188 ~~l~~~G~~~s-lD~L--GEa--v~te~eA~~~~~~y~~~I~ai~~~~~~~~~~~~~~VSVKlSaLg~~~~-~~~~~~v~ 261 (551)
T 3e2q_A 188 RKLEEKGFRYS-YDML--GEA--ALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYS-RAQYDRVM 261 (551)
T ss_dssp HHHHTTTCEEE-EEEC--CCS--CCSHHHHHHHHHHHHHHHHHHHHHHTTCHHHHSCEEEECHHHHSTTGG-GCCHHHHH
T ss_pred HHHHhCCCEEE-Eecc--ccc--cCCHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCeEEEehhhcCcccc-hHHHHHHH
Confidence 44777888755 3321 122 1245555566667777776654432 2467775432222211 11123445
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc----CCCceeEeee
Q psy13372 127 TTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH----GISNVQLQFD 188 (273)
Q Consensus 127 ~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~----~~~~~g~~~D 188 (273)
+.+.+++++++..|+++||.+.|--... ...+-+++++++|..- +-+++|+++-
T Consensus 262 ~~l~~rl~~L~~~A~~~gv~v~IDAEe~--------~~~dlTLdl~~~l~~~~~~~~~~~~GitlQ 319 (551)
T 3e2q_A 262 EELYPRLKSLTLLARQYDIGINIDAEES--------DRLEISLDLLEKLCFEPELAGWNGIGFVIQ 319 (551)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCCCG--------GGHHHHHHHHHHHHTCGGGTTCCCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEeCCcc--------chhHHHHHHHHHHhcCCccccCCCceEEee
Confidence 6789999999999999999998876321 1346778888443321 1256787644
No 164
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=80.05 E-value=11 Score=31.34 Aligned_cols=124 Identities=6% Similarity=0.017 Sum_probs=68.5
Q ss_pred HHHHHHcCCCeEEecCCCC-----CC--CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 27 YRVAAELGFRYIESWFPPV-----GV--TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~-----~~--~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.+.+-+.|.|.|++..+.. .. -.+++++..+..+-.+.-+-. +.+.-. .+.+.+++++|..
T Consensus 132 a~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIl----Et~~Lt--------~eei~~A~~ia~e 199 (288)
T 3oa3_A 132 AKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVIL----ETSQLT--------ADEIIAGCVLSSL 199 (288)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEEC----CGGGCC--------HHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcCCCceEEE----ECCCCC--------HHHHHHHHHHHHH
Confidence 4566788999999887631 11 124444444443322211111 111111 2356789999999
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
+|+.+|.+-+|.....- ..+ -++.+++.++... ..|.+-.. . -+.|.+++++++ + .+
T Consensus 200 aGADfVKTSTGf~~~GA--------T~e-dv~lmr~~v~~~g-~~v~VKAA-------G--GIrt~edAl~mi---~-aG 256 (288)
T 3oa3_A 200 AGADYVKTSTGFNGPGA--------SIE-NVSLMSAVCDSLQ-SETRVKAS-------G--GIRTIEDCVKMV---R-AG 256 (288)
T ss_dssp TTCSEEECCCSSSSCCC--------CHH-HHHHHHHHHHHSS-SCCEEEEE-------S--SCCSHHHHHHHH---H-TT
T ss_pred cCCCEEEcCCCCCCCCC--------CHH-HHHHHHHHHHHhC-CCceEEEe-------C--CCCCHHHHHHHH---H-cC
Confidence 99999999887643221 122 2455666554321 22333322 1 267899999999 5 44
Q ss_pred CCceeE
Q psy13372 180 ISNVQL 185 (273)
Q Consensus 180 ~~~~g~ 185 (273)
...+|.
T Consensus 257 A~RiGt 262 (288)
T 3oa3_A 257 AERLGA 262 (288)
T ss_dssp CSEEEE
T ss_pred Cceeeh
Confidence 455554
No 165
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=79.81 E-value=26 Score=29.36 Aligned_cols=92 Identities=9% Similarity=0.002 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHH-hhCCc---EEEEccCCCCCCCCcccCC
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAEL-ERHSL---TALIEPVNQHSVPGYYLSS 164 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a-~~~gv---~i~lE~~~~~~~~~~~~~~ 164 (273)
.+.+.++++++.|+..|..|....+. +...+.-.+...++.+.+ .++|| .|.+-|.- +.+..+
T Consensus 121 ~~~~~~~l~a~~ga~vV~mh~d~~G~--------p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgi-----g~~gk~ 187 (300)
T 3k13_A 121 VFLEHARIIKQYGAATVVMAFDEKGQ--------ADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNV-----LAVATG 187 (300)
T ss_dssp HHHHHHHHHHHHTCEEEEESEETTEE--------CCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCC-----CCCSSS
T ss_pred hHHHHHHHHHHhCCeEEEEeeCCCCC--------CCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCC-----CccCCC
Confidence 45578899999999999888632111 112444556677777776 88999 48888742 224445
Q ss_pred HHH----HHHHHHHHhhcC--CCceeEeeeccccc
Q psy13372 165 FRV----AERLIRELRAHG--ISNVQLQFDFFNAQ 193 (273)
Q Consensus 165 ~~~----~~~li~~~~~~~--~~~~g~~~D~~h~~ 193 (273)
.++ .+++++.++.+. -|++-++.=+++..
T Consensus 188 ~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkS 222 (300)
T 3k13_A 188 IEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLS 222 (300)
T ss_dssp CGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGG
T ss_pred hHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECccc
Confidence 454 555554434432 25666666666543
No 166
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=79.70 E-value=26 Score=29.29 Aligned_cols=132 Identities=8% Similarity=0.002 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia-Gvg------~~~--------t~~ai~ 97 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA-HVG------CVS--------TAESQQ 97 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------CCC--------HHHHHH
Confidence 4677788888999999999875321 122 22233343333 33332 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++... ++.+.+-|.+.. ...--+++...++.
T Consensus 98 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~va~a~~--~lPiilYn~P~~---tg~~l~~~~~~~La 163 (303)
T 2wkj_A 98 LAASAKRYGFDAVSAVTPFYYPF---------SFEEHCDHYRAIIDSAD--GLPMVVYNIPAL---SGVKLTLDQINTLV 163 (303)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC---------CHHHHHHHHHHHHHHHT--TCCEEEEECHHH---HCCCCCHHHHHHHH
T ss_pred HHHHHHhCCCCEEEecCCCCCCC---------CHHHHHHHHHHHHHhCC--CCCEEEEeCccc---cCCCCCHHHHHHHh
Confidence 77778889999876644332111 23567777777766442 388888886421 11233566666666
Q ss_pred HHHhhcCCCceeEeee
Q psy13372 173 RELRAHGISNVQLQFD 188 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D 188 (273)
+ .||+--.=|
T Consensus 164 ---~---~pnIvgiK~ 173 (303)
T 2wkj_A 164 ---T---LPGVGALXQ 173 (303)
T ss_dssp ---T---STTEEEEEE
T ss_pred ---c---CCCEEEEeC
Confidence 4 377544334
No 167
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=79.67 E-value=7.8 Score=32.61 Aligned_cols=80 Identities=5% Similarity=-0.063 Sum_probs=51.7
Q ss_pred HHHHHHHHcCCCeEEecCCCC--C------CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 25 DKYRVAAELGFRYIESWFPPV--G------VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~--~------~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
..++.+.++|.++|.+...++ . ..+.++.+..+++|+.+..-..+.+...+...++ -+.+..+++.
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~------~~~v~~aa~~ 185 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDR------EQAIIDAAKE 185 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCH------HHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCCh------hHHHHHHHHH
Confidence 567788899999999664322 1 2357778888899998764222211111110112 1456677888
Q ss_pred HHHcCCCeEEecCC
Q psy13372 97 ACALNIPAIHIMSG 110 (273)
Q Consensus 97 a~~lG~~~i~~~~G 110 (273)
+..+|+.++.++++
T Consensus 186 a~~lGaD~iKv~~~ 199 (304)
T 1to3_A 186 LGDSGADLYKVEMP 199 (304)
T ss_dssp HTTSSCSEEEECCG
T ss_pred HHHcCCCEEEeCCC
Confidence 99999999999874
No 168
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=79.59 E-value=28 Score=31.43 Aligned_cols=134 Identities=7% Similarity=-0.007 Sum_probs=85.6
Q ss_pred CcchHHHHHHHHHHHHHHHhhCC---cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc-CCCceeEeeecccccccCC
Q psy13372 122 SEDPYTTLKENLIYACAELERHS---LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH-GISNVQLQFDFFNAQRICG 197 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~g---v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~-~~~~~g~~~D~~h~~~~~~ 197 (273)
-++.++++.+.-+++++...+.| +++...+ .+.|.+++.+++ +++ ..+++-..+=..|......
T Consensus 20 g~~~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g---------~v~t~~~~~~~~---~~~n~~~~vdgvi~~~~TFs~a~ 87 (500)
T 4f2d_A 20 GPETLRQVTQHAEHVVNALNTEAKLPCKLVLKP---------LGTTPDEITAIC---RDANYDDRCAGLVVWLHTFSPAK 87 (500)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHTCCSSEEEECC---------CBCSHHHHHHHH---HHHHHCTTEEEEEEECCSCCCTH
T ss_pred CHHHHHHHHHHHHHHHHHhccccCCCeEEEecC---------cCCCHHHHHHHH---HHhccccCCcEEEEeCCcCccHH
Confidence 45678888888888877666543 5666554 588999999999 666 3566544444444433344
Q ss_pred ChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHH----------HHHHHHHHcCCCceEEEeeecCCChHHHHHHHHH
Q psy13372 198 DLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYA----------YVFELLAREGYEGYVGLEYKPQGNTKEGLEEFLK 267 (273)
Q Consensus 198 ~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~----------~i~~~L~~~gy~g~~~lE~~~~~~~~~~~~~~~~ 267 (273)
.+...++.+..-+.+.|...++ ..|-+..++||- .+-..|.+.|.+-.++.-+.......+.+..|++
T Consensus 88 ~~i~~l~~l~~PvL~~~~q~~~--~ip~~~id~d~m~lnqsacG~~e~~~~l~r~gi~~~~v~G~~~d~~~~~~i~~w~r 165 (500)
T 4f2d_A 88 MWINGLTMLNKPLLQFHTQFNA--ALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERIGSWMR 165 (500)
T ss_dssp HHHHHHHHCCSCEEEEECCSCS--SCCTTTCCHHHHHHCCHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEeCCCCC--CCCccccchHHHhccccccchHHHHHHHHHcCCCeEEEECCCCCHHHHHHHHHHHH
Confidence 4667788888778888877652 233221333443 3445688888765555555444457777777887
Q ss_pred hh
Q psy13372 268 TF 269 (273)
Q Consensus 268 ~~ 269 (273)
..
T Consensus 166 aa 167 (500)
T 4f2d_A 166 QA 167 (500)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 169
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=79.50 E-value=55 Score=32.94 Aligned_cols=136 Identities=12% Similarity=0.047 Sum_probs=79.3
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCCCCCCcccCCHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
..++.|.+.|++.+++... . . . ++.++...+.+++.|.. ..+........+..-..+++-+.
T Consensus 649 ~~i~~a~~~g~d~irif~s-l--~------~-------~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~ 712 (1165)
T 2qf7_A 649 YFVRQAAKGGIDLFRVFDC-L--N------W-------VENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYT 712 (1165)
T ss_dssp HHHHHHHHHTCCEEEEECT-T--C------C-------GGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHH
T ss_pred HHHHHHHhcCcCEEEEEee-H--H------H-------HHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHH
Confidence 4666667779999988632 1 1 1 23566667777778843 34432211100211235788889
Q ss_pred HHHHHHhhcCCCceeEeeecccccccCC--ChHHHHHhcCCcceeEEeccCCCC--------------------CCC--C
Q psy13372 170 RLIRELRAHGISNVQLQFDFFNAQRICG--DLTHTFGACRDLIGHVQIAQAPDR--------------------QEP--H 225 (273)
Q Consensus 170 ~li~~~~~~~~~~~g~~~D~~h~~~~~~--~~~~~i~~~~~~i~~vHi~d~~~~--------------------~~~--g 225 (273)
++++++.+.+...+.+ -|+.-...... ++...+++..+-..++|.+|..+. ... +
T Consensus 713 ~~~~~~~~~Ga~~i~l-~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ti~GlGe~ 791 (1165)
T 2qf7_A 713 NLAVELEKAGAHIIAV-KDMAGLLKPAAAKVLFKALREATGLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAAMDALSGN 791 (1165)
T ss_dssp HHHHHHHHTTCSEEEE-EETTCCCCHHHHHHHHHHHHHHCSSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSB
T ss_pred HHHHHHHHcCCCEEEE-eCccCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHhCCCEEEecccccCCC
Confidence 9997777777554443 36543322111 122333332355678999986432 012 2
Q ss_pred CCCcccHHHHHHHHHHcCCC
Q psy13372 226 ARGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 226 ~~G~id~~~i~~~L~~~gy~ 245 (273)
. |..+...++..|+..||+
T Consensus 792 ~-Gn~~le~vv~~L~~~g~~ 810 (1165)
T 2qf7_A 792 T-SQPCLGSIVEALSGSERD 810 (1165)
T ss_dssp T-SCCBHHHHHHHHTTSTTC
T ss_pred c-cchhHHHHHHHHHhcCCC
Confidence 4 899999999999988876
No 170
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=79.46 E-value=29 Score=29.65 Aligned_cols=92 Identities=12% Similarity=-0.020 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
.....++.....|+.++.++.|........+. .+...-.+++.+++ ..++.+..= .-+.+++++
T Consensus 240 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~------~~~iPVi~~---------Ggi~t~e~a 303 (349)
T 3hgj_A 240 DTLAFARRLKELGVDLLDCSSGGVVLRVRIPL-APGFQVPFADAVRK------RVGLRTGAV---------GLITTPEQA 303 (349)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC-CTTTTHHHHHHHHH------HHCCEEEEC---------SSCCCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCcCcccccCC-CccccHHHHHHHHH------HcCceEEEE---------CCCCCHHHH
Confidence 45567777788999999998664322100010 11111122233332 235665422 125689999
Q ss_pred HHHHHHHhhcCCCceeEeeecccccccCCChHHHH
Q psy13372 169 ERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTF 203 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i 203 (273)
.+++ +.-.-.-|+ ++-......++..-+
T Consensus 304 ~~~l---~~G~aD~V~----iGR~~lanPdl~~k~ 331 (349)
T 3hgj_A 304 ETLL---QAGSADLVL----LGRVLLRDPYFPLRA 331 (349)
T ss_dssp HHHH---HTTSCSEEE----ESTHHHHCTTHHHHH
T ss_pred HHHH---HCCCceEEE----ecHHHHhCchHHHHH
Confidence 9999 653222222 244444555544333
No 171
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=79.33 E-value=30 Score=29.78 Aligned_cols=203 Identities=13% Similarity=0.002 Sum_probs=102.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCch-hHHHHHHHHHHHHHHHHHcC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKG-KESEFRASLEKTIQYACALN 101 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~a~~lG 101 (273)
.+.++.++++|...|=-..+.+ ..+.+.+.++.+++|+.+.+...... .. ..|. .....++.+...+..--.-|
T Consensus 89 ~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~-~~---~~P~~~~~~~~~~L~~~~~~ei~~G 164 (364)
T 3k2g_A 89 IAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYL-AS---SMPETAARLSADDIADEIVAEALEG 164 (364)
T ss_dssp HHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCC-GG---GCCGGGGTCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccC-CC---CCchhhccCCHHHHHHHHHHHHHhc
Confidence 3556778889988764444421 26889999999999998765332211 00 0111 00111233333222111112
Q ss_pred -----CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 102 -----IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 102 -----~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
++...+ |..+-+. ...+.-.+.|+.-+++|++.|+.+.++.-.. .....+.++++ +
T Consensus 165 i~~~~vkag~I--GEiGld~-------~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr-------~~a~~e~l~iL---~ 225 (364)
T 3k2g_A 165 TDGTDARIGLI--GEIGVSS-------DFTAEEEKSLRGAARAQVRTGLPLMVHLPGW-------FRLAHRVLDLV---E 225 (364)
T ss_dssp BTTBSCCCSSE--EEEECCT-------TCCHHHHHHHHHHHHHHHHHCCCEEEECCTT-------SCCHHHHHHHH---H
T ss_pred cccCCcceeEE--EEEEcCC-------CCCHHHHHHHHHHHHHHHHHCCeEEEecCCC-------CccHHHHHHHH---H
Confidence 222111 1111110 0113455678888899999999999995111 23457778888 7
Q ss_pred hcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCC--CCCC----CCcccHHHHHHHHHHcCCCceEEE
Q psy13372 177 AHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQ--EPHA----RGEIDYAYVFELLAREGYEGYVGL 250 (273)
Q Consensus 177 ~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~--~~g~----~G~id~~~i~~~L~~~gy~g~~~l 250 (273)
+.+.+.-++. ++|....+.++. ..+++.+.=.++-+.-. +.. .|.. ..+..-...++.+.+.||-..+++
T Consensus 226 e~g~~~~~vv--i~H~~~s~~~~e-~a~~~l~~G~~I~f~g~-gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drill 301 (364)
T 3k2g_A 226 EEGADLRHTV--LCHMNPSHMDPV-YQATLAQRGAFLEFDMI-GMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILL 301 (364)
T ss_dssp HTTCCGGGEE--ECCCGGGTTCHH-HHHHHHHHTCEEEECCT-TCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred HcCCCCCceE--EECCCCCCCCHH-HHHHHHhCCcEEEecCC-cccccccccccccccHHHHHHHHHHHHHhCCcccEEE
Confidence 7654432222 257765443543 33333333334444421 110 1110 011123345666667888889999
Q ss_pred eee
Q psy13372 251 EYK 253 (273)
Q Consensus 251 E~~ 253 (273)
|..
T Consensus 302 eTD 304 (364)
T 3k2g_A 302 SHD 304 (364)
T ss_dssp CCC
T ss_pred eCC
Confidence 965
No 172
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=79.23 E-value=23 Score=28.35 Aligned_cols=102 Identities=15% Similarity=0.118 Sum_probs=60.5
Q ss_pred HHHHHHHHHHcCCCeEEecCC--CCCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFP--PVGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
..+-++.++++|.+||-+-.- ....+.+.++++++.. |+.++ ++..++ ..+.+ .-.++++....
T Consensus 78 M~~Di~~~~~~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vT-FHRAFD----~~~~~--------d~~~ale~L~~ 144 (224)
T 2bdq_A 78 MEEDILRAVELESDALVLGILTSNNHIDTEAIEQLLPATQGLPLV-FHMAFD----VIPKS--------DQKKSIDQLVA 144 (224)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCTTSSBCHHHHHHHHHHHTTCCEE-ECGGGG----GSCTT--------THHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCeEE-EECchh----ccCCc--------CHHHHHHHHHH
Confidence 344567889999999999852 2346778888877664 57655 333211 11001 12245777778
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
+|+++|-+. |..+.. ....-.+.|+++.+.+.. .+.|.
T Consensus 145 lGv~rILTS-G~~~~~---------~a~~g~~~L~~Lv~~a~~-ri~Im 182 (224)
T 2bdq_A 145 LGFTRILLH-GSSNGE---------PIIENIKHIKALVEYANN-RIEIM 182 (224)
T ss_dssp TTCCEEEEC-SCSSCC---------CGGGGHHHHHHHHHHHTT-SSEEE
T ss_pred cCCCEEECC-CCCCCC---------cHHHHHHHHHHHHHhhCC-CeEEE
Confidence 999999874 443221 012335567777776554 35554
No 173
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=79.17 E-value=11 Score=30.33 Aligned_cols=134 Identities=14% Similarity=-0.016 Sum_probs=71.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+.++.++.+.+.|.+.+=+..... .+.+.+.++.++++--+.++++... . .++..+..++.+++.++. -+
T Consensus 17 ~~~~~l~~~~~~Gv~~~v~~~~~~-~~~~~~~~~~~~~p~~~~~~g~~P~----~--~~~~~~~~~~~l~~~~~~---~~ 86 (265)
T 2gzx_A 17 DLSEVITRAREAGVDRMFVVGFNK-STIERAMKLIDEYDFLYGIIGWHPV----D--AIDFTEEHLEWIESLAQH---PK 86 (265)
T ss_dssp THHHHHHHHHHTTCCEEEEEECSH-HHHHHHHHHHHHCTTEEEEECCCGG----G--GGGCCHHHHHHHHHHTTS---TT
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCH-HHHHHHHHHHHhCCCEEEEEEeccC----c--cccCCHHHHHHHHHHhcC---CC
Confidence 789999999999998765543321 3456677778888742223322110 0 111112234444444321 01
Q ss_pred CCeEEecCCC-CCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCC
Q psy13372 102 IPAIHIMSGK-TESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGI 180 (273)
Q Consensus 102 ~~~i~~~~G~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 180 (273)
+..+.. .|. .... . .......+.+.++.++|+++|+.+.+++-. ...++.+++ ++...
T Consensus 87 ~~~iGe-~Gl~~~~~------~-~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~----------~~~~~~~~l---~~~p~ 145 (265)
T 2gzx_A 87 VIGIGE-MGLDYHWD------K-SPADVQKEVFRKQIALAKRLKLPIIIHNRE----------ATQDCIDIL---LEEHA 145 (265)
T ss_dssp EEEEEE-EEEECSCC------S-SCHHHHHHHHHHHHHHHHHHTCCEEEEEES----------CHHHHHHHH---HHTTG
T ss_pred EEEEEe-ccCCCCCC------C-CCHHHHHHHHHHHHHHHHHcCCcEEEEecc----------cHHHHHHHH---HhcCC
Confidence 111211 111 0001 0 112344567888899999999999988621 246778888 77632
Q ss_pred CceeEe
Q psy13372 181 SNVQLQ 186 (273)
Q Consensus 181 ~~~g~~ 186 (273)
+.++++
T Consensus 146 ~~~~~i 151 (265)
T 2gzx_A 146 EEVGGI 151 (265)
T ss_dssp GGTCEE
T ss_pred CCCcEE
Confidence 256664
No 174
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=78.77 E-value=2.6 Score=39.89 Aligned_cols=87 Identities=14% Similarity=0.197 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHcCCCeEEe---cCCCCCC----CC---C--CCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 86 FRASLEKTIQYACALNIPAIHI---MSGKTES----SR---T--QPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~---~~G~~~~----~~---~--~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
..+..++.|++|++.|.++|.+ -.|.-.. .. + .|. ++- -|.+|+++|++.||.|.+....
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~-pd~-------Dl~eL~~YA~sKGV~iilw~~t 440 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPY-PDF-------DVKEIHRYAARKGIKMMMHHET 440 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBC-TTC-------CHHHHHHHHHHTTCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccC-CCC-------CHHHHHHHHHhCCCEEEEEEcC
Confidence 3578899999999999999999 4443210 00 0 111 111 2788999999999998887643
Q ss_pred CCCCCCcccCCHHHHHHHHHHHhhcCCCcee
Q psy13372 154 QHSVPGYYLSSFRVAERLIRELRAHGISNVQ 184 (273)
Q Consensus 154 ~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g 184 (273)
.. ...++-...+++.+.+ ++.+-..|+
T Consensus 441 ~~-~~~n~e~~~d~~f~~~---~~~Gv~GVK 467 (738)
T 2d73_A 441 SA-SVRNYERHMDKAYQFM---ADNGYNSVK 467 (738)
T ss_dssp TT-BHHHHHHHHHHHHHHH---HHTTCCEEE
T ss_pred CC-chhhHHHHHHHHHHHH---HHcCCCEEE
Confidence 21 0001223355566666 887655443
No 175
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=78.75 E-value=23 Score=29.18 Aligned_cols=201 Identities=7% Similarity=-0.024 Sum_probs=95.0
Q ss_pred HHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCe
Q psy13372 27 YRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPA 104 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 104 (273)
++.+++.|.+.+=...... ..+.+.+.++++++|+.+.+ .+.+.. . . ......+...+.+.+.+..-...|+.-
T Consensus 53 l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~hp~-~--~-~~~~~~~~~~~~l~~~~~~~~~~gige 128 (314)
T 2vc7_A 53 VKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIYIY-I--D-LPFYFLNRSIDEIADLFIHDIKEGIQG 128 (314)
T ss_dssp HHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEBCCS-S--C-CCGGGTTCCHHHHHHHHHHHHHTCSSS
T ss_pred HHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeecCCC-C--C-CchhhhccCHHHHHHHHHHHHHhhccc
Confidence 4778899999874443321 24578888999999987653 332211 0 0 000000011233333333222333322
Q ss_pred EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCcee
Q psy13372 105 IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQ 184 (273)
Q Consensus 105 i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g 184 (273)
+.+.+|......+ .........+.++...++|+++|+.+.++.-.. .....+.++++ ++.+.+..+
T Consensus 129 ~G~~~g~i~~~ld----~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~-------~~~~~~~~~~l---~~~~~~~~~ 194 (314)
T 2vc7_A 129 TLNKAGFVKIAAD----EPGITKDVEKVIRAAAIANKETKVPIITHSNAH-------NNTGLEQQRIL---TEEGVDPGK 194 (314)
T ss_dssp SSCCCCSEEEECC----TTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTT-------TTHHHHHHHHH---HHTTCCGGG
T ss_pred CCCCCCeEEEeec----CCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCc-------ccChHHHHHHH---HHcCCCccc
Confidence 1111111000000 001123345678888999999999998875200 01234667777 765544333
Q ss_pred EeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCc-ccHHHHHHHHHHcCCCceEEEeee
Q psy13372 185 LQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGE-IDYAYVFELLAREGYEGYVGLEYK 253 (273)
Q Consensus 185 ~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~-id~~~i~~~L~~~gy~g~~~lE~~ 253 (273)
+. +.|+.. ..+. +.++++.+.=.++-+.-. + .... +. -+....+..+.+.|+...+.+|..
T Consensus 195 ~~--i~H~~~-~~~~-~~~~~~~~~G~~i~~~~~-~--~~~~-~~~~~~~~~i~~~~~~g~~drilleTD 256 (314)
T 2vc7_A 195 IL--IGHLGD-TDNI-DYIKKIADKGSFIGLDRY-G--LDLF-LPVDKRNETTLRLIKDGYSDKIMISHD 256 (314)
T ss_dssp EE--ETTGGG-CCCH-HHHHHHHHTTCEEEECCT-T--CTTT-SCHHHHHHHHHHHHHTTCTTTEEECCC
T ss_pred EE--EECCCC-CCCH-HHHHHHHHcCCEEEEeCC-C--cccC-CCHHHHHHHHHHHHHcCCCCeEEEcCC
Confidence 33 246543 2333 334444333345555421 1 0000 11 123334445556667677888865
No 176
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=78.45 E-value=29 Score=29.20 Aligned_cols=135 Identities=10% Similarity=-0.011 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 97 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA-GVG------AHS--------TRQVLE 97 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CCC--------HHHHHH
Confidence 4677788888999999988864221 122 22233333333 44443 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCC-CCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSG-KTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
..+.|+++|+..+.+.+. +.... ...+.++++++.+++ ..++.+.+-|.+... ...--+++...++
T Consensus 98 la~~a~~~Gadavlv~~P~y~~kp--------~~~~~l~~~f~~ia~---a~~lPiilYn~P~~t--~g~~l~~~~~~~L 164 (318)
T 3qfe_A 98 HINDASVAGANYVLVLPPAYFGKA--------TTPPVIKSFFDDVSC---QSPLPVVIYNFPGVC--NGIDLDSDMITTI 164 (318)
T ss_dssp HHHHHHHHTCSEEEECCCCC---C--------CCHHHHHHHHHHHHH---HCSSCEEEEECCC------CCCCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCcccCCC--------CCHHHHHHHHHHHHh---hCCCCEEEEeCCccc--CCCCCCHHHHHHH
Confidence 677788899998876543 33211 123466667766655 457899999975310 0233457777777
Q ss_pred HHHHhhcCCCceeEeeec
Q psy13372 172 IRELRAHGISNVQLQFDF 189 (273)
Q Consensus 172 i~~~~~~~~~~~g~~~D~ 189 (273)
. +++ ||+--.=|.
T Consensus 165 a---~~~--pnIvgiKds 177 (318)
T 3qfe_A 165 A---RKN--PNVVGVKLT 177 (318)
T ss_dssp H---HHC--TTEEEEEES
T ss_pred H---hhC--CCEEEEEeC
Confidence 7 655 775444443
No 177
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=78.40 E-value=8.8 Score=32.30 Aligned_cols=86 Identities=14% Similarity=0.032 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCH-HHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSF-RVAER 170 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~-~~~~~ 170 (273)
..++.|.++|+..|.+..... .+ ....+..+.++++.+.++++|+.+.+|......+... -.++ +...+
T Consensus 112 ~~ve~a~~~GAdaV~vlv~~~-~d--------~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~-~~~~~~~v~~ 181 (304)
T 1to3_A 112 INAQAVKRDGAKALKLLVLWR-SD--------EDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGD-KFDREQAIID 181 (304)
T ss_dssp CCHHHHHHTTCCEEEEEEEEC-TT--------SCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCS-CCCHHHHHHH
T ss_pred hhHHHHHHcCCCEEEEEEEcC-CC--------ccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCcccc-CCChhHHHHH
Confidence 456667788999988653222 21 1126778899999999999999999998653221110 0122 22333
Q ss_pred HHHHHhhcCCCceeEee
Q psy13372 171 LIRELRAHGISNVQLQF 187 (273)
Q Consensus 171 li~~~~~~~~~~~g~~~ 187 (273)
.++++.+++...+++-+
T Consensus 182 aa~~a~~lGaD~iKv~~ 198 (304)
T 1to3_A 182 AAKELGDSGADLYKVEM 198 (304)
T ss_dssp HHHHHTTSSCSEEEECC
T ss_pred HHHHHHHcCCCEEEeCC
Confidence 34333666655555544
No 178
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=78.28 E-value=12 Score=33.91 Aligned_cols=104 Identities=12% Similarity=0.135 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTL 129 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 129 (273)
++..+.+++.|+..+-+.+...........-...+..++.+.++|+.|.+.|...|.-.-.............+...+.+
T Consensus 48 ~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~~~~w~~~~~~~~~~~~~~~ 127 (515)
T 3icg_A 48 HAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENEWLKPFYANEAQVKAQL 127 (515)
T ss_dssp HHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEECCSCTTTCCCSGGGHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCCCccccccccccHHHHHHH
Confidence 44455566667666654332100000000111224568899999999999999876543221111100000134456777
Q ss_pred HHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 130 KENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 130 ~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.+.++++++..+.+.-.+++|.++
T Consensus 128 ~~~w~~ia~~f~~~~~~v~~el~N 151 (515)
T 3icg_A 128 TKVWTQIANNFKKYGDHLIFETMN 151 (515)
T ss_dssp HHHHHHHHHHTTTCCTTEEEECCS
T ss_pred HHHHHHHHHHhcCCCCeEEEEecc
Confidence 888888888888876567888765
No 179
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=78.17 E-value=25 Score=28.26 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHH---c--CCeeEEEecC---CccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTR---H--GLKQVLINTE---VDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~---~--gL~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+......+++.|.|.||+..++ ...+.+.+.+.++. . ++.+.. +.. .|+.+ ..++ + ....
T Consensus 18 e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~v~~~~~~lr~~~~~~PiI~-T~R~~~eGG~~--~~~~---~----~~~~ 87 (238)
T 1sfl_A 18 ETLIQKINHRIDAIDVLELRIDQFENVTVDQVAEMITKLKVMQDSFKLLV-TYRTKLQGGYG--QFTN---D----SYLN 87 (238)
T ss_dssp CHHHHHHHHTTTTCSEEEEECTTSTTCCHHHHHHHHHHHC---CCSEEEE-ECCBGGGTSCB--CCCH---H----HHHH
T ss_pred HHHHHHHHhhhcCCCEEEEEecccccCCHHHHHHHHHHHHHhccCCCEEE-EeeccccCCCC--CCCH---H----HHHH
Confidence 33444555567899999999873 22345555554443 2 344432 221 11221 1112 2 2334
Q ss_pred HHHHHHHc-CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 93 TIQYACAL-NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 93 ~i~~a~~l-G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
.++.+.++ ++.+|-+-.... .. .+.++++.+.+++.|+++.+-.|+.. -.++.++...+
T Consensus 88 ll~~~~~~~~~d~iDvEl~~~-~~--------------~~~~~~l~~~~~~~~~kvI~S~Hdf~-----~tp~~~el~~~ 147 (238)
T 1sfl_A 88 LISDLANINGIDMIDIEWQAD-ID--------------IEKHQRIITHLQQYNKEVIISHHNFE-----STPPLDELQFI 147 (238)
T ss_dssp HHHHGGGCTTCCEEEEECCTT-SC--------------HHHHHHHHHHHHHTTCEEEEEEEESS-----CCCCHHHHHHH
T ss_pred HHHHHHHhCCCCEEEEEccCC-CC--------------hHHHHHHHHHHHhcCCEEEEEecCCC-----CCcCHHHHHHH
Confidence 45555556 577777743210 00 13345666677777776666554321 12334666666
Q ss_pred HHHHhhcCCCceeE
Q psy13372 172 IRELRAHGISNVQL 185 (273)
Q Consensus 172 i~~~~~~~~~~~g~ 185 (273)
+++....+..-+++
T Consensus 148 ~~~~~~~gaDivKi 161 (238)
T 1sfl_A 148 FFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHHTTCCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 63333333333333
No 180
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=78.13 E-value=31 Score=29.26 Aligned_cols=24 Identities=13% Similarity=0.043 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCC
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKT 112 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~ 112 (273)
.....++.+...|+.++.++.|..
T Consensus 230 ~~~~~a~~l~~~Gvd~i~v~~~~~ 253 (338)
T 1z41_A 230 DHIGFAKWMKEQGVDLIDCSSGAL 253 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCS
T ss_pred HHHHHHHHHHHcCCCEEEEecCcc
Confidence 455667777889999999987643
No 181
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=78.04 E-value=8.6 Score=32.83 Aligned_cols=108 Identities=10% Similarity=0.053 Sum_probs=64.6
Q ss_pred HHHHHHHcCCCeEEecCCCC--------CC-------CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHH
Q psy13372 26 KYRVAAELGFRYIESWFPPV--------GV-------TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASL 90 (273)
Q Consensus 26 ~l~~~~~~G~~~vEl~~~~~--------~~-------~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (273)
-++.+.+.|.+.|.+..+-. .. ...+..+.++++|+.+..-... + +..-....+++
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~------~---~~~~~~~~~~~ 171 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLED------W---SNGFRNSPDYV 171 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEET------H---HHHHHHCHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEE------C---CCCCcCCHHHH
Confidence 57778888999888875311 01 1244556678899987632211 0 00111235678
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+.++.+..+|+..|.+.-. .+.. .+.....+++.+++-.+ ++.|.++.|+.
T Consensus 172 ~~~~~~~~~~Ga~~i~l~DT-~G~~------~P~~v~~lv~~l~~~~p-----~~~i~~H~Hnd 223 (337)
T 3ble_A 172 KSLVEHLSKEHIERIFLPDT-LGVL------SPEETFQGVDSLIQKYP-----DIHFEFHGHND 223 (337)
T ss_dssp HHHHHHHHTSCCSEEEEECT-TCCC------CHHHHHHHHHHHHHHCT-----TSCEEEECBCT
T ss_pred HHHHHHHHHcCCCEEEEecC-CCCc------CHHHHHHHHHHHHHhcC-----CCeEEEEecCC
Confidence 88889999999999988521 1121 34445555555544321 68888888654
No 182
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=77.97 E-value=30 Score=29.02 Aligned_cols=135 Identities=8% Similarity=-0.041 Sum_probs=76.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 94 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV-TTS------HYS--------TQVCAA 94 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------Cch--------HHHHHH
Confidence 4677788888999999998864221 122 22333334333 43432 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..-..+.++++++.+++ ..++.+.+-|.+. ...--+++...++.
T Consensus 95 la~~A~~~Gadavlv~~Pyy~~~------~~~s~~~l~~~f~~va~---a~~lPiilYn~P~----tg~~l~~~~~~~La 161 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPYHGAT------FRVPEAQIFEFYARVSD---AIAIPIMVQDAPA----SGTALSAPFLARMA 161 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCBTTT------BCCCHHHHHHHHHHHHH---HCSSCEEEEECGG----GCCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCccC------CCCCHHHHHHHHHHHHH---hcCCCEEEEeCCC----CCCCCCHHHHHHHH
Confidence 77788899999987654332100 01123566667766655 4578888888652 12234567777777
Q ss_pred HHHhhcCCCc-eeEeeec
Q psy13372 173 RELRAHGISN-VQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~-~g~~~D~ 189 (273)
+++ || +|+=+|.
T Consensus 162 ---~~~--pnIvgiK~~~ 174 (309)
T 3fkr_A 162 ---REI--EQVAYFXIET 174 (309)
T ss_dssp ---HHS--TTEEEEEECS
T ss_pred ---hhC--CCEEEEECCC
Confidence 665 67 5555454
No 183
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=77.92 E-value=18 Score=29.42 Aligned_cols=125 Identities=12% Similarity=0.038 Sum_probs=76.9
Q ss_pred CHHHHHHHHHHcC--CCeEEecCC----CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELG--FRYIESWFP----PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G--~~~vEl~~~----~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
++...=+.+..+| .|++-+.+- ++..-+++..++.++||+.+..=+++. +. .-....+.+.++
T Consensus 24 g~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~--E~---------~~~qg~~~~yl~ 92 (251)
T 1qwg_A 24 PPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLF--EY---------AYSKGKFDEFLN 92 (251)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHH--HH---------HHHTTCHHHHHH
T ss_pred CHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHH--HH---------HHHcCcHHHHHH
Confidence 4444444444455 788888753 222235777788889999987533211 11 111236778899
Q ss_pred HHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 96 YACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
.|+.+|...|-+-.|...- +. +...++.+.+++.|.++..|--... .+.....++.+.++.+
T Consensus 93 ~~k~lGf~~iEiS~G~i~l-------~~-------~~~~~~I~~~~~~G~~v~~EvG~k~-~~~~~~~~~~~~I~~~ 154 (251)
T 1qwg_A 93 ECEKLGFEAVEISDGSSDI-------SL-------EERNNAIKRAKDNGFMVLTEVGKKM-PDKDKQLTIDDRIKLI 154 (251)
T ss_dssp HHHHHTCCEEEECCSSSCC-------CH-------HHHHHHHHHHHHTTCEEEEEECCSS-HHHHTTCCHHHHHHHH
T ss_pred HHHHcCCCEEEECCCcccC-------CH-------HHHHHHHHHHHHCCCEEeeeccccC-CcccCCCCHHHHHHHH
Confidence 9999999999998776633 22 2345566788889999988862211 0012345667766666
No 184
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=77.91 E-value=31 Score=29.23 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
...++.+.++++.|.+.|...|.-.-...+.........+...+.+++.++++++..+.+.-.+++|.++-
T Consensus 79 ~~~l~~l~~~v~~a~~~Gi~vildlH~~~~w~~~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NE 149 (345)
T 3ndz_A 79 QTWMKRVEEIANYAFDNDMYVIINLHHENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNE 149 (345)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEECCCSCTTTCCCSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEecCCccccccccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccC
Confidence 34578999999999999998765422221111000011345677888888888888888754568887653
No 185
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=77.90 E-value=23 Score=29.49 Aligned_cols=132 Identities=8% Similarity=-0.038 Sum_probs=73.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- .++ .+...+
T Consensus 22 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 86 (297)
T 2rfg_A 22 ALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIA-GAG------SNN--------PVEAVR 86 (297)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE-ccC------CCC--------HHHHHH
Confidence 4677788888999999988864211 122 22223333332 44432 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++ +.++.+.+-|.+.. ...--+++...++.
T Consensus 87 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~va~---a~~lPiilYn~P~~---tg~~l~~~~~~~La 151 (297)
T 2rfg_A 87 YAQHAQQAGADAVLCVAGYYNRP---------SQEGLYQHFKMVHD---AIDIPIIVYNIPPR---AVVDIKPETMARLA 151 (297)
T ss_dssp HHHHHHHHTCSEEEECCCTTTCC---------CHHHHHHHHHHHHH---HCSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCCCCCC---------CHHHHHHHHHHHHH---hcCCCEEEEeCccc---cCCCCCHHHHHHHH
Confidence 77788889999886654333111 23566777766654 45788888886421 11233566666666
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 152 ---~---~pnIvgiKds 162 (297)
T 2rfg_A 152 ---A---LPRIVGVKDA 162 (297)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEEeC
Confidence 4 3774333343
No 186
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=77.84 E-value=23 Score=29.35 Aligned_cols=132 Identities=13% Similarity=-0.016 Sum_probs=72.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg------~~~--------t~~ai~ 87 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA-GTG------ANS--------TREAIE 87 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE-eCC------CCC--------HHHHHH
Confidence 4667788888999999988865321 122 22223333333 44432 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 88 la~~a~~~Gadavlv~~P~y~~~------~---~~~l~~~f~~ia~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 152 (291)
T 3tak_A 88 LTKAAKDLGADAALLVTPYYNKP------T---QEGLYQHYKAIAEA---VELPLILYNVPGR---TGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---CCSCEEEEECHHH---HSCCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCCCCCCC------C---HHHHHHHHHHHHHh---cCCCEEEEecccc---cCCCCCHHHHHHHH
Confidence 77788899999886654332111 2 34566777666554 4788888886431 11223455544444
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 153 ---~---~pnivgiK~s 163 (291)
T 3tak_A 153 ---E---IPNIVGIKDA 163 (291)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEEeC
Confidence 3 4775444443
No 187
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=77.77 E-value=12 Score=30.34 Aligned_cols=111 Identities=14% Similarity=0.090 Sum_probs=64.0
Q ss_pred HHHHHHcCCCeEEecCCCC-----CC--CHHHHHHHHHHcC-CeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 27 YRVAAELGFRYIESWFPPV-----GV--TLEQLVAAQTRHG-LKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~-----~~--~~~~~~~~l~~~g-L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
.+.+-+.|.+.|++..+.. .. -.+++++..+..+ ..+-.+- +.+.- + -+.+.+++++|.
T Consensus 101 a~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIl-----Et~~L-t-------~eei~~a~~ia~ 167 (239)
T 3ngj_A 101 TKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTKVII-----ECCYL-T-------NEEKVEVCKRCV 167 (239)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEEC-----CGGGS-C-------HHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceEEEE-----ecCCC-C-------HHHHHHHHHHHH
Confidence 4455677999999998731 11 1244444444433 2222221 11111 1 246888999999
Q ss_pred HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 99 ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..|+.+|.+-+|..+..- +. .-++.+++.+ ..+.||+.+ .+ +.|.+++++++
T Consensus 168 ~aGADfVKTSTGf~~ggA-----t~----~dv~lmr~~v--g~~v~VKas---------GG--Irt~~da~~~i 219 (239)
T 3ngj_A 168 AAGAEYVKTSTGFGTHGA-----TP----EDVKLMKDTV--GDKALVKAA---------GG--IRTFDDAMKMI 219 (239)
T ss_dssp HHTCSEEECCCSSSSCCC-----CH----HHHHHHHHHH--GGGSEEEEE---------SS--CCSHHHHHHHH
T ss_pred HHCcCEEECCCCCCCCCC-----CH----HHHHHHHHhh--CCCceEEEe---------CC--CCCHHHHHHHH
Confidence 999999999888643321 11 2244455544 344455554 22 67889999999
No 188
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=77.72 E-value=35 Score=33.55 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCC----------CC---CCCHHHHHHHHHHcCCeeEEE-ecCCccc-------------c
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP----------PV---GVTLEQLVAAQTRHGLKQVLI-NTEVDEN-------------F 74 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~----------~~---~~~~~~~~~~l~~~gL~i~~~-~~~~~~~-------------~ 74 (273)
-+++.++.++++|+..|++-.+ ++ ..+++++.++++++||.++.- +.+.-.+ .
T Consensus 57 ~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~ 136 (1003)
T 3og2_A 57 LYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVK 136 (1003)
T ss_dssp GHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCC
T ss_pred HHHHHHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHHHHHHHcCCEEEecCCcceeeecCCCCccchhccCC
Confidence 5899999999999999998743 12 135899999999999999742 2111000 0
Q ss_pred C--CCCCchhHHHHHHHHHHHHHHHHHc----CCCeEEecC----CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC
Q psy13372 75 G--YAAVKGKESEFRASLEKTIQYACAL----NIPAIHIMS----GKTESSRTQPIASEDPYTTLKENLIYACAELERHS 144 (273)
Q Consensus 75 ~--~~~~~~~~~~~~~~~~~~i~~a~~l----G~~~i~~~~----G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g 144 (273)
+ -+.+|..++.....+++.++..+.. |.+.|-++. |....... .. -.+.++.|.+++++.|
T Consensus 137 ~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~----~~-----d~~Ym~~L~~~~~~~G 207 (1003)
T 3og2_A 137 GKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVL----FP-----NKPYMQYVIDQARNAG 207 (1003)
T ss_dssp SCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSC----SS-----CHHHHHHHHHHHHHTT
T ss_pred CeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCccccccc----CC-----CHHHHHHHHHHHHHcC
Confidence 0 1235666777777888888877765 445554443 22111100 00 1357888888888888
Q ss_pred cEE
Q psy13372 145 LTA 147 (273)
Q Consensus 145 v~i 147 (273)
+.+
T Consensus 208 i~V 210 (1003)
T 3og2_A 208 IIV 210 (1003)
T ss_dssp CCS
T ss_pred Cce
Confidence 753
No 189
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=77.42 E-value=27 Score=30.48 Aligned_cols=139 Identities=12% Similarity=0.023 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecC-----------CCCCCC------------------HHHHHHHH--HHcCCeeEEEecC
Q psy13372 21 ANYLDKYRVAAELGFRYIESWF-----------PPVGVT------------------LEQLVAAQ--TRHGLKQVLINTE 69 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~-----------~~~~~~------------------~~~~~~~l--~~~gL~i~~~~~~ 69 (273)
+.+.++.+.+.++|||+|||+. |..+.. ++++++.+ +.-+++++....+
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~ 250 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDH 250 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecccccc
Q ss_pred CccccCCCCCchhHHHHHHHHHHHHHHHHHcC------CCeEEecCCCCCCCCCCCCCCcc-hHHHHHHHHHHHHHHHhh
Q psy13372 70 VDENFGYAAVKGKESEFRASLEKTIQYACALN------IPAIHIMSGKTESSRTQPIASED-PYTTLKENLIYACAELER 142 (273)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG------~~~i~~~~G~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~a~~ 142 (273)
.+...+.+ .+.....++.+...| +..+.++.|....... ... .+..-...+..+..+.+.
T Consensus 251 ~g~~~~~~---------~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~vk~~ 317 (402)
T 2hsa_B 251 LDAMDSNP---------LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQ----TEAGRLGSEEEEARLMRTLRNA 317 (402)
T ss_dssp TTCCCSCH---------HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTT----SSSTTTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCCC---------HHHHHHHHHHHHhcCCccCCceEEEEEecCccccccC----CccccccCCcchHHHHHHHHHH
Q ss_pred CCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeE
Q psy13372 143 HSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQL 185 (273)
Q Consensus 143 ~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~ 185 (273)
.++.+. ...-+ +++++.+++ +.-.-..|++
T Consensus 318 ~~iPvi---------~~G~i-~~~~a~~~l---~~g~aD~V~i 347 (402)
T 2hsa_B 318 YQGTFI---------CSGGY-TRELGIEAV---AQGDADLVSY 347 (402)
T ss_dssp CSSCEE---------EESSC-CHHHHHHHH---HTTSCSEEEE
T ss_pred CCCCEE---------EeCCC-CHHHHHHHH---HCCCCceeee
No 190
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=77.37 E-value=8.8 Score=31.92 Aligned_cols=131 Identities=5% Similarity=-0.093 Sum_probs=79.8
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.++++.++.++++|.+..=+..... ..+.+.+.++.++++ .+..+.... .. ..++ ..+.+++.. .
T Consensus 34 ~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p-~~~g~vg~v--~~---~~~~----~~~~L~~l~----~ 99 (303)
T 4do7_A 34 YLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEA-RIAAVVGWE--DL---RAPQ----LAERVAEWR----G 99 (303)
T ss_dssp BCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCT-TEEEEEECC--CT---TCTT----HHHHHTTCC----S
T ss_pred CCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCC-CeEEEEEEe--CC---CCch----HHHHHHHHh----h
Confidence 3899999999999999766654321 133566777777777 444332111 11 1122 223343332 4
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchH-HHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPY-TTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.|++-|+...... . ... ...-+.+.+..+.++++|+.+.++.- .....++.+++ ++.
T Consensus 100 ~gv~Gir~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~glpv~ih~~---------~~~l~~l~~ll---~~~ 157 (303)
T 4do7_A 100 TKLRGFRHQLQDE---------A-DVRAFVDDADFARGVAWLQANDYVYDVLVF---------ERQLPDVQAFC---ARH 157 (303)
T ss_dssp SCEEEEECCGGGS---------S-CHHHHHHCHHHHHHHHHHHHTTCEEEECCC---------GGGHHHHHHHH---HHC
T ss_pred cCceEEEecCcCC---------C-CccccccCHHHHHHHHHHHHCCCeEEEecC---------HHHHHHHHHHH---HHC
Confidence 6777777653211 1 111 12335688888999999999999862 12456788888 887
Q ss_pred CCCceeEeeec
Q psy13372 179 GISNVQLQFDF 189 (273)
Q Consensus 179 ~~~~~g~~~D~ 189 (273)
|.+.+++|=
T Consensus 158 --P~l~iVi~H 166 (303)
T 4do7_A 158 --DAHWLVLDH 166 (303)
T ss_dssp --CSSCEEEGG
T ss_pred --CCCCEEEeC
Confidence 889999874
No 191
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=77.28 E-value=8.9 Score=30.79 Aligned_cols=130 Identities=15% Similarity=0.101 Sum_probs=77.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.++.+.++.+.++||.+|=+... .++..++.++. +.+.+...+ ..|.. ..+ .-..-++. -+.
T Consensus 17 ~~i~~l~~~A~~~~~~aVcv~p~----~v~~a~~~l~g--v~v~tvigF---P~G~~-~~~-------~k~~E~~~-i~~ 78 (226)
T 1vcv_A 17 DEAVAGARKAEELGVAAYCVNPI----YAPVVRPLLRK--VKLCVVADF---PFGAL-PTA-------SRIALVSR-LAE 78 (226)
T ss_dssp HHHHHHHHHHHHHTCSEEEECGG----GHHHHGGGCSS--SEEEEEEST---TTCCS-CHH-------HHHHHHHH-HTT
T ss_pred HHHHHHHHHHHHhCCCEEEECHH----HHHHHHHHhCC--CeEEEEeCC---CCCCC-chH-------HHHHHHHH-HHC
Confidence 36788889999999999988632 23444444433 777654322 12221 111 11122333 568
Q ss_pred CCCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
||.-|-+. .|... ...|+.+.+-++++.+.+...++++.||+. ++ +.++..+.++-..+.
T Consensus 79 GAdEID~Vinig~~~---------~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~--------~L-t~eei~~a~~ia~ea 140 (226)
T 1vcv_A 79 VADEIDVVAPIGLVK---------SRRWAEVRRDLISVVGAAGGRVVKVITEEP--------YL-RDEERYTLYDIIAEA 140 (226)
T ss_dssp TCSEEEEECCHHHHH---------TTCHHHHHHHHHHHHHHTTTSEEEEECCGG--------GC-CHHHHHHHHHHHHHH
T ss_pred CCCEEEEecchhhhc---------CCCHHHHHHHHHHHHHHHcCCCceEEEecc--------CC-CHHHHHHHHHHHHHc
Confidence 99987554 33331 234778888899999998878899999983 23 355555555222555
Q ss_pred CCCceeEe
Q psy13372 179 GISNVQLQ 186 (273)
Q Consensus 179 ~~~~~g~~ 186 (273)
+...++..
T Consensus 141 GADfVKTS 148 (226)
T 1vcv_A 141 GAHFIKSS 148 (226)
T ss_dssp TCSEEECC
T ss_pred CCCEEEeC
Confidence 65555543
No 192
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=77.05 E-value=28 Score=30.77 Aligned_cols=96 Identities=14% Similarity=0.078 Sum_probs=54.8
Q ss_pred HHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcch
Q psy13372 49 LEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDP 125 (273)
Q Consensus 49 ~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~ 125 (273)
..++.+.+++. +|++..+++..+.. . .+++.....++.+.+.++...+.|.+ .+.+. |+++.......+....
T Consensus 200 ~~~ll~~~~~~~~l~l~Glh~H~gs~--~-~d~~~~~~a~~~~~~l~~~l~~~G~~l~~ldiG-GG~~i~y~~~~~~~~~ 275 (443)
T 3vab_A 200 ARAAYARAASLPGLNVVGIDMHIGSQ--I-IDLEPFDNAFALMAELVKELQADGHNIRHVDVG-GGLGIPYRTPNTPPPP 275 (443)
T ss_dssp HHHHHHHHHHSTTEEEEEEECCCCSS--B-CCSHHHHHHHHHHHHHHHHHHHTTCCCCEEECC-CCBCCCCCCC---CCC
T ss_pred HHHHHHHHhhCCCceEEEEEEeccCC--C-CCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeC-CCcccCcCCCCCCCCC
Confidence 34444555565 48888887764311 1 35666666777777777777777754 55554 3343221100001124
Q ss_pred HHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 126 YTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 126 ~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.+++.. +++|++|.+||
T Consensus 276 ~~~~~~~i~~~~---~~~~~~l~~EP 298 (443)
T 3vab_A 276 PVAYAQIVAKHI---KPLGLKTVFEP 298 (443)
T ss_dssp HHHHHHHHHHHH---GGGCSEEEECC
T ss_pred HHHHHHHHHHHH---HhcCCEEEEec
Confidence 666666665544 34689999998
No 193
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=76.98 E-value=7.9 Score=32.47 Aligned_cols=76 Identities=13% Similarity=0.085 Sum_probs=49.4
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC-------CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG-------VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~-------~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
+...++.+.++|.++|.+....+. .+..++.+..+++|+.+.... +.+... ..+ -+.+..+++
T Consensus 127 l~~~ve~Av~~GAdaV~~~i~~Gs~~~~~~l~~i~~v~~~a~~~GlpvIie~-~~G~~~--~~d-------~e~i~~aar 196 (295)
T 3glc_A 127 VALSMDDAVRLNSCAVAAQVYIGSEYEHQSIKNIIQLVDAGMKVGMPTMAVT-GVGKDM--VRD-------QRYFSLATR 196 (295)
T ss_dssp ECSCHHHHHHTTCSEEEEEECTTSTTHHHHHHHHHHHHHHHHTTTCCEEEEE-CC------CCS-------HHHHHHHHH
T ss_pred hHHHHHHHHHCCCCEEEEEEECCCCcHHHHHHHHHHHHHHHHHcCCEEEEEC-CCCCcc--CCC-------HHHHHHHHH
Confidence 334567777999999999865331 124577777888998876532 222111 111 134567899
Q ss_pred HHHHcCCCeEEec
Q psy13372 96 YACALNIPAIHIM 108 (273)
Q Consensus 96 ~a~~lG~~~i~~~ 108 (273)
+|.++|+.+|.+.
T Consensus 197 iA~elGAD~VKt~ 209 (295)
T 3glc_A 197 IAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHhCCCEEEeC
Confidence 9999999999886
No 194
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=76.95 E-value=9.3 Score=31.25 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
....+.+++.++.|..+|++++++..-.. ++.++ +......++-+.+.|++..+...+.||++-+
T Consensus 44 ~~G~~~l~~iv~~c~~~GI~~lTlYaFStENwkRp-~~EV~~Lm~l~~~~l~~~~~~l~~~~vrlr~ 109 (253)
T 3qas_B 44 KAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP-AQEVSALMELFVWALDSEVKSLHRHNVRLRI 109 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCCC------------------CTHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEecCcccCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCeEEEE
Confidence 34578899999999999999999975432 12221 0002223444556677766667778988765
No 195
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=76.94 E-value=17 Score=30.18 Aligned_cols=112 Identities=10% Similarity=0.116 Sum_probs=63.2
Q ss_pred HHHHHHHHHcCCCeEEecCCCC--------CC----C---HHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV--------GV----T---LEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFR 87 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~--------~~----~---~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~ 87 (273)
.+-++.+.+.|++.|.+..+-. .. . ..+..+.++++|+.+.. ++.-.+...+...+ .
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~-------~ 154 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVT-------P 154 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECC-------H
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCC-------H
Confidence 4567888899999999874210 11 1 24456778899999863 32211111100011 3
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+++.+.++.+.++|+..+.+.. ..+.. .+.....+++.+++ ... ++.+.++.|+.
T Consensus 155 ~~~~~~~~~~~~~G~d~i~l~D-t~G~~------~P~~~~~lv~~l~~---~~~--~~~l~~H~Hn~ 209 (295)
T 1ydn_A 155 QAVASVTEQLFSLGCHEVSLGD-TIGRG------TPDTVAAMLDAVLA---IAP--AHSLAGHYHDT 209 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEE-TTSCC------CHHHHHHHHHHHHT---TSC--GGGEEEEEBCT
T ss_pred HHHHHHHHHHHhcCCCEEEecC-CCCCc------CHHHHHHHHHHHHH---hCC--CCeEEEEECCC
Confidence 5677788888899999998862 11111 23333333333332 221 37788888653
No 196
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=76.92 E-value=9.4 Score=32.73 Aligned_cols=54 Identities=7% Similarity=-0.034 Sum_probs=36.8
Q ss_pred HHHHH-HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 93 TIQYA-CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 93 ~i~~a-~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.++.. +.+|+..|+++.+...... +. .+ ...+.|.++++.|.++||.+.|..|.
T Consensus 58 d~~~l~~~~G~N~VRip~~~~~~~~--~~-~~----~~l~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 58 AFVALSNDWGSNMIRLAMYIGENGY--AT-NP----EVKDLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHTTSCCSEEEEEEESSSSST--TT-CT----THHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHCCCCEEEEEeeeCCCCC--cc-CH----HHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 44443 5899999999755311110 01 11 23478999999999999999999875
No 197
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=76.69 E-value=28 Score=28.02 Aligned_cols=76 Identities=9% Similarity=-0.046 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCCeEEecCCCC------CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 25 DKYRVAAELGFRYIESWFPPV------GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~------~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
...+.+-+.|.|.|++..+.+ ..++.++++...++|+.+-.+-- .+.- . -+.+.+++++|.
T Consensus 92 ~e~~~Av~~GAdEID~vinig~~~~~v~~ei~~v~~a~~~~g~~lKvIlE-----t~~L-~-------~e~i~~a~ria~ 158 (234)
T 1n7k_A 92 VEAQTVLEAGATELDVVPHLSLGPEAVYREVSGIVKLAKSYGAVVKVILE-----APLW-D-------DKTLSLLVDSSR 158 (234)
T ss_dssp HHHHHHHHHTCCEEEECCCGGGCHHHHHHHHHHHHHHHHHTTCEEEEECC-----GGGS-C-------HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEe-----ccCC-C-------HHHHHHHHHHHH
Confidence 345667788999999998743 12345666667777775533321 1111 1 146888999999
Q ss_pred HcCCCeEEecCCCCC
Q psy13372 99 ALNIPAIHIMSGKTE 113 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~ 113 (273)
++|+.+|.+-+|..+
T Consensus 159 eaGADfVKTsTG~~~ 173 (234)
T 1n7k_A 159 RAGADIVKTSTGVYT 173 (234)
T ss_dssp HTTCSEEESCCSSSC
T ss_pred HhCCCEEEeCCCCCC
Confidence 999999999877653
No 198
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=76.31 E-value=32 Score=28.54 Aligned_cols=130 Identities=9% Similarity=-0.030 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH---HHHHH-HHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL---EQLVA-AQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~---~~~~~-~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. .++.+ ..+..+ +.+.. ++- ..+ .+...+
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg------~~~--------t~~ai~ 89 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVT-GVL------VDS--------IEDAAD 89 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEE-EEC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------Ccc--------HHHHHH
Confidence 4677788888999999999875321 222 23333 333333 33332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... -..+.++++++.+++..-+-++.+.+-|.+.. ...--+++...++.
T Consensus 90 la~~A~~~Gadavlv~~P~y~~~--------~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~---tg~~l~~~~~~~La 158 (294)
T 3b4u_A 90 QSAEALNAGARNILLAPPSYFKN--------VSDDGLFAWFSAVFSKIGKDARDILVYNIPSV---TMVTLSVELVGRLK 158 (294)
T ss_dssp HHHHHHHTTCSEEEECCCCSSCS--------CCHHHHHHHHHHHHHHHCTTCCCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCcCCCC--------CCHHHHHHHHHHHHHhcCCCCCcEEEEECcch---hCcCCCHHHHHHHH
Confidence 77788899999886654333110 12356777777766543111678888886421 11233567777777
Q ss_pred HHHhhcCCCc
Q psy13372 173 RELRAHGISN 182 (273)
Q Consensus 173 ~~~~~~~~~~ 182 (273)
+++ ||
T Consensus 159 ---~~~--pn 163 (294)
T 3b4u_A 159 ---AAF--PG 163 (294)
T ss_dssp ---HHC--TT
T ss_pred ---HhC--CC
Confidence 654 66
No 199
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=76.21 E-value=27 Score=29.29 Aligned_cols=133 Identities=10% Similarity=-0.082 Sum_probs=74.4
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
..+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++ |..+ .+...
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpVia-Gv------g~~~--------t~~ai 92 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIA-GV------GTND--------TRDSI 92 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE-EC------CCSS--------HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eC------CCcC--------HHHHH
Confidence 35788899999999999999875321 122 22333334433 33332 22 1111 23455
Q ss_pred HHHHHHHHcCC-CeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHH
Q psy13372 92 KTIQYACALNI-PAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAER 170 (273)
Q Consensus 92 ~~i~~a~~lG~-~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~ 170 (273)
+..+.|+.+|+ ..+.+.+...... + .+.++++++.+++ ..++.+.+-|.+.. ...--+++...+
T Consensus 93 ~la~~A~~~Ga~davlv~~P~y~~~------s---~~~l~~~f~~va~---a~~lPiilYn~P~~---tg~~l~~~~~~~ 157 (311)
T 3h5d_A 93 EFVKEVAEFGGFAAGLAIVPYYNKP------S---QEGMYQHFKAIAD---ASDLPIIIYNIPGR---VVVELTPETMLR 157 (311)
T ss_dssp HHHHHHHHSCCCSEEEEECCCSSCC------C---HHHHHHHHHHHHH---SCSSCEEEEECHHH---HSSCCCHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEcCCCCCCC------C---HHHHHHHHHHHHH---hCCCCEEEEecccc---cCCCCCHHHHHH
Confidence 67778889997 8775544332111 1 2456666666554 45788888886421 122335666666
Q ss_pred HHHHHhhcCCCceeEeeec
Q psy13372 171 LIRELRAHGISNVQLQFDF 189 (273)
Q Consensus 171 li~~~~~~~~~~~g~~~D~ 189 (273)
+. + .||+--.=|.
T Consensus 158 La---~---~pnIvgiKds 170 (311)
T 3h5d_A 158 LA---D---HPNIIGVKEC 170 (311)
T ss_dssp HH---T---STTEEEEEEC
T ss_pred Hh---c---CCCEEEEEeC
Confidence 66 4 3775444443
No 200
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=76.14 E-value=18 Score=29.61 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=66.8
Q ss_pred HHHHHHHHcCCCeEEecCCCC----------CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 25 DKYRVAAELGFRYIESWFPPV----------GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~----------~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
...+.+-+.|.+.|++..+.. ..++.++++...++|..+-.+- +.+...+ .+.+++++
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIl-----Et~~L~d-------~e~i~~a~ 156 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVII-----ETGELKD-------EALIRKAS 156 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEEC-----CHHHHCS-------HHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEE-----ecccCCc-------HHHHHHHH
Confidence 335566778999999997631 1234566666666565432221 1111011 13467899
Q ss_pred HHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 95 QYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 95 ~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
++|.++|+.+|.+-+|..+..- +.+ -+..+++..+... .|-++.+-.-+ -+.|.+++++++
T Consensus 157 ~ia~eaGADfVKTSTGf~~~gA-----t~e----~v~lm~~~I~~~~-~g~~v~VKaaG-------GIrt~~~al~~i 217 (260)
T 1p1x_A 157 EISIKAGADFIKTSTGKVAVNA-----TPE----SARIMMEVIRDMG-VEKTVGFKPAG-------GVRTAEDAQKYL 217 (260)
T ss_dssp HHHHHTTCSEEECCCSCSSCCC-----CHH----HHHHHHHHHHHHT-CTTTCEEECBS-------SCCSHHHHHHHH
T ss_pred HHHHHhCCCEEEeCCCCCCCCC-----CHH----HHHHHHHHHHHhc-CCCCceEEEeC-------CCCCHHHHHHHH
Confidence 9999999999999887653321 222 1223333322111 12233333311 367899999999
No 201
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=76.03 E-value=20 Score=29.93 Aligned_cols=108 Identities=9% Similarity=0.032 Sum_probs=67.9
Q ss_pred CHHHHHHHHH-HcCCCeEEecCCCCCCCHHHHHHHHHH-----cCCeeEEEe-cCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAA-ELGFRYIESWFPPVGVTLEQLVAAQTR-----HGLKQVLIN-TEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 22 ~~~~~l~~~~-~~G~~~vEl~~~~~~~~~~~~~~~l~~-----~gL~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
++...++.++ +.+|.+|=+. | ..+...++.|+. .++.+.++. +|. |..+ .+ .-..-+
T Consensus 43 ~I~~lc~eA~~~~~~aaVCV~-P---~~V~~a~~~L~~~~~~~s~v~V~tVigFP~----G~~~-~e-------~K~~Ea 106 (297)
T 4eiv_A 43 SVAAVCKIAAKDPAIVGVSVR-P---AFVRFIRQELVKSAPEVAGIKVCAAVNFPE----GTGT-PD-------TVSLEA 106 (297)
T ss_dssp HHHHHHHHHHSSSCCSEEEEC-G---GGHHHHHHTGGGTCGGGGGSEEEEEESTTT----CCCC-HH-------HHHHHH
T ss_pred HHHHHHHHHHhhcCcEEEEEC-H---HHHHHHHHHhcccCcCCCCCeEEEEecCCC----CCCC-HH-------HHHHHH
Confidence 4566677777 7788888775 2 345667777877 568888753 332 2221 11 111234
Q ss_pred HHHHHcCCCeEEe--cCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 95 QYACALNIPAIHI--MSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 95 ~~a~~lG~~~i~~--~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+.|-+.||.-|-+ ..|....+ +...|+.+.+-++.+.+.+...-+++.||+
T Consensus 107 ~~Av~~GAdEIDmVinig~lk~~------~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt 159 (297)
T 4eiv_A 107 VGALKDGADEIECLIDWRRMNEN------VADGESRIRLLVSEVKKVVGPKTLKVVLSG 159 (297)
T ss_dssp HHHHHTTCSEEEEECCTHHHHHC------HHHHHHHHHHHHHHHHHHHTTSEEEEECCS
T ss_pred HHHHHcCCCEEEeeeeHHHHhcc------cCCcHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4556679998744 33333211 225688888888888888876668999997
No 202
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=75.98 E-value=34 Score=28.72 Aligned_cols=133 Identities=10% Similarity=-0.002 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg------~~~--------t~~ai~ 110 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV-SVS------DLT--------TAKTVR 110 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------CCC--------HHHHHH
Confidence 4667788888999999998864221 122 22223333332 44443 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... ..+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 111 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~L~ 175 (315)
T 3na8_A 111 RAQFAESLGAEAVMVLPISYWKL---------NEAEVFQHYRAVGEA---IGVPVMLYNNPGT---SGIDMSVELILRIV 175 (315)
T ss_dssp HHHHHHHTTCSEEEECCCCSSCC---------CHHHHHHHHHHHHHH---CSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHHHHh---CCCcEEEEeCcch---hCcCCCHHHHHHHH
Confidence 77888999999987754333111 235666777666544 4688888886531 11233566667775
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
.++ ||+--.=|.
T Consensus 176 ---a~~--pnIvgiKds 187 (315)
T 3na8_A 176 ---REV--DNVTMVKES 187 (315)
T ss_dssp ---HHS--TTEEEEEEC
T ss_pred ---hcC--CCEEEEECC
Confidence 554 775444454
No 203
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=75.68 E-value=6.1 Score=35.32 Aligned_cols=46 Identities=11% Similarity=-0.087 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCC-----------CCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP-----------PVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~-----------~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
.+...|+.+|.+|.+||++..+ |+-...+++.++++++||++..+-
T Consensus 34 ~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq~vm 90 (495)
T 1wdp_A 34 GLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQAIM 90 (495)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEE
Confidence 6788899999999999998743 221235899999999999997543
No 204
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=75.60 E-value=44 Score=33.10 Aligned_cols=123 Identities=7% Similarity=0.038 Sum_probs=70.0
Q ss_pred HHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC---------------------CCeEEecCCCC
Q psy13372 54 AAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN---------------------IPAIHIMSGKT 112 (273)
Q Consensus 54 ~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG---------------------~~~i~~~~G~~ 112 (273)
+.+++.|+..+. ... ++. ..+.+..+...+.+.++|+...... -..|.+-+...
T Consensus 155 ~~l~~~G~~~~l-D~l--GE~--~~~~~eA~~~~~~y~~~i~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~vSvKlSal 229 (1026)
T 4f9i_A 155 EKLRKDGFAAVV-DVL--GEA--TLSEEEAEVYTNTYLELLEALKKEQGSWKGLPGKGGDPGLDWGHAPKVNIAVKPTAL 229 (1026)
T ss_dssp HHHHHTTCEEEE-EES--CCS--CCSHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCSSSCTTSBTTTBCSCEEEECGGGS
T ss_pred HHHHhCCCEEEE-ecc--ccc--cCCHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccCCcceeeehhhh
Confidence 447778887763 221 122 1245556666666777777654321 11344433222
Q ss_pred CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHH-hhc-CCCceeEeeecc
Q psy13372 113 ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIREL-RAH-GISNVQLQFDFF 190 (273)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~-~~~-~~~~~g~~~D~~ 190 (273)
....+ +...+..++.+.+++++++..|+++|+.+.|--... ...+.+.+++++| +++ +.|.+|+++-.+
T Consensus 230 ~~~~~-~~~~~~~~~~~~~rl~~i~~~A~~~~v~v~iDaEe~--------~~~~~tl~l~~~l~~~~~~~~~vg~v~QaY 300 (1026)
T 4f9i_A 230 FCLAN-PQDFEGSVVAILDRMRRIFKKVMELNGFLCIDMESY--------RHKEIILEVFRRLKLEYRDYPHLGIVLQAY 300 (1026)
T ss_dssp CTTCC-GGGHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCCG--------GGHHHHHHHHHHHHHHTTTCCCEEEEEETT
T ss_pred hhhcc-hhhhhhHHHHHHHHHHHHHHHHHHcCCEEEEcCCCc--------cchHHHHHHHHHHHHHhcCCCceEEEehhh
Confidence 22111 111345678999999999999999999999876321 1234445555443 333 337789886543
No 205
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=75.42 E-value=5 Score=36.18 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=54.8
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
.++..+.+|+..||++..........+..... +...+.|.++++.|.++|+.+.|..+... ..+..+.+.+.++.
T Consensus 44 d~~~i~~~G~N~VRipv~~~~~~~~~~~~~~~--~~~l~~ld~vv~~a~~~Gl~VIlD~H~~~---~~~~~~~~~~~~~w 118 (491)
T 2y8k_A 44 QIARVKELGFNAVHLYAECFDPRYPAPGSKAP--GYAVNEIDKIVERTRELGLYLVITIGNGA---NNGNHNAQWARDFW 118 (491)
T ss_dssp HHGGGGGGTCCEEEEEEEECCTTTTSTTCCCT--TTTHHHHHHHHHHHHHHTCEEEEEEECTT---CTTCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECceeecccccCCCccCh--hHHHHHHHHHHHHHHHCCCEEEEECCCCC---CCccccHHHHHHHH
Confidence 34455689999999964311100000000011 12367789999999999999998876431 11234567777777
Q ss_pred HHH-hhc-CCCceeEeeeccccc
Q psy13372 173 REL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 173 ~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
+++ +.. +.|+| .||+.|-.
T Consensus 119 ~~iA~ryk~~p~V--i~el~NEP 139 (491)
T 2y8k_A 119 KFYAPRYAKETHV--LYEIHNEP 139 (491)
T ss_dssp HHHHHHHTTCTTE--EEECCSSC
T ss_pred HHHHHHhCCCCce--EEEeecCC
Confidence 443 222 45764 39987743
No 206
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=75.39 E-value=23 Score=32.74 Aligned_cols=95 Identities=7% Similarity=0.066 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCC---CCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTE---SSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLS 163 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~ 163 (273)
++.+++.|+..+..+...++.|+.... ..+..+. +.. -.+.+++++++|++.||++..|-.+..+.+ .+
T Consensus 165 ~~~ik~~id~ma~~KlN~~h~Hl~DDq~~~~~wr~~Y-p~~----~~~~i~elv~yA~~rgI~vv~~i~Pe~d~~---~~ 236 (594)
T 2v5c_A 165 HQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPY-PES----EMQRMQELINASAENKVDFVFGISPGIDIR---FD 236 (594)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCTTCGGGTTTTTSCC-CGG----GHHHHHHHHHHHHHTTCEEEEEECGGGTCC---CS
T ss_pred HHHHHHHHHHHHHhCCcEEEEecccCcccccccCCCC-CHH----HHHHHHHHHHHHHHCCcEEEEecCCCcccc---CC
Confidence 578899999999999999999974321 1111111 221 155789999999999999985543321112 22
Q ss_pred C---HHHHHHHHHHHhh---cCCCceeEeeec
Q psy13372 164 S---FRVAERLIRELRA---HGISNVQLQFDF 189 (273)
Q Consensus 164 ~---~~~~~~li~~~~~---~~~~~~g~~~D~ 189 (273)
+ ......|.+.+++ .+...+.+.+|=
T Consensus 237 ~~~~~~~~~~l~~k~~~l~~~G~~~f~IG~DE 268 (594)
T 2v5c_A 237 GDAGEEDFNHLITKAESLYDMGVRSFAIYWDD 268 (594)
T ss_dssp THHHHHHHHHHHHHHHHHHTTTCCEEEEECSS
T ss_pred CcchHHHHHHHHHHHHHHHhcCCcEEEecCcc
Confidence 2 2333334433333 344556666664
No 207
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=74.89 E-value=6 Score=35.36 Aligned_cols=46 Identities=15% Similarity=-0.025 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCC-----------CCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP-----------PVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~-----------~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
.+...|+.+|.+|.+||++..+ |+-...+++.++++++||++..+-
T Consensus 35 ~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mv~~~GLKlq~vm 91 (498)
T 1fa2_A 35 KVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQAIM 91 (498)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEE
Confidence 5788899999999999998853 221235899999999999997543
No 208
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=74.71 E-value=19 Score=36.17 Aligned_cols=113 Identities=10% Similarity=-0.074 Sum_probs=71.5
Q ss_pred HHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchh-HHHHHHHHHHHHHHHHHc
Q psy13372 23 YLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGK-ESEFRASLEKTIQYACAL 100 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~a~~l 100 (273)
....++.+++.|.+.|-+.... +-.......+..++.|..+.....+.+..+ +++. .....+++.+.++.+..+
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~----~pe~~~~~~~~~~~~~a~~~~~~ 704 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDIL----NPERSNIYTLEYYVKLAKELERE 704 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTT----CTTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeeccccc----ChhhcCCCCHHHHHHHHHHHHHc
Confidence 4556889999999999887652 223456677778888876654444432111 1111 012357888889999999
Q ss_pred CCCeEEec--CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 101 NIPAIHIM--SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 101 G~~~i~~~--~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
|+..|.+. .|.. .+.....+++.|++- .++.|.++.|+.
T Consensus 705 Ga~~i~l~Dt~G~~---------~P~~~~~lv~~l~~~------~~~~i~~H~Hnt 745 (1150)
T 3hbl_A 705 GFHILAIKDMAGLL---------KPKAAYELIGELKSA------VDLPIHLHTHDT 745 (1150)
T ss_dssp TCSEEEEEETTCCC---------CHHHHHHHHHHHHHH------CCSCEEEEECBT
T ss_pred CCCeeeEcCccCCC---------CHHHHHHHHHHHHHh------cCCeEEEEeCCC
Confidence 99999885 2322 344455555555443 278888888653
No 209
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=74.24 E-value=10 Score=30.69 Aligned_cols=99 Identities=9% Similarity=0.104 Sum_probs=62.7
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC-CCCC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP-VGVT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~-~~~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
.+.+.+++.+++.|...|-+. |. +... .+.+.++..++|+ .+- |.+ |.. ++++...++.
T Consensus 168 V~vetAiaml~dmG~~SvKff-PM~Gl~~leEl~avAkAca~~g~---~lE-PTG---GId---------l~Nf~~I~~i 230 (275)
T 3m6y_A 168 VPIKTAIALVRDMGGNSLKYF-PMKGLAHEEEYRAVAKACAEEGF---ALE-PTG---GID---------KENFETIVRI 230 (275)
T ss_dssp EEHHHHHHHHHHHTCCEEEEC-CCTTTTTHHHHHHHHHHHHHHTC---EEE-EBS---SCC---------TTTHHHHHHH
T ss_pred eeHHHHHHHHHHcCCCeeeEe-ecCCcccHHHHHHHHHHHHHcCc---eEC-CCC---Ccc---------HhHHHHHHHH
Confidence 388999999999999999995 53 2233 4556677788998 222 222 121 3578889999
Q ss_pred HHHcCCCeEEecCCCC--CCCCCCCCCCcchHHHHHHHHHHHHH
Q psy13372 97 ACALNIPAIHIMSGKT--ESSRTQPIASEDPYTTLKENLIYACA 138 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~--~~~~~~~~~~~~~~~~~~~~l~~l~~ 138 (273)
|-..|++.|.-|...- .... ..+..+..+.+...++++++
T Consensus 231 ~l~aGv~~viPHIYsSIIDk~T--G~TrpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 231 ALEANVEQVIPHVYSSIIDKET--GNTKVEAVRELLAVVKKLVD 272 (275)
T ss_dssp HHHTTCSCBCCEECGGGBCTTT--CCBCHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCeecccccceeccCCC--CCCCHHHHHHHHHHHHHHHh
Confidence 9999999987664332 1110 11144455555555555554
No 210
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=74.09 E-value=4.9 Score=34.01 Aligned_cols=62 Identities=6% Similarity=-0.074 Sum_probs=42.3
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.++.++..+.+|++.|+++.+....... +. +...-+...+.++++++.|+++|+.+.|..+.
T Consensus 30 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~-~~-~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~ 91 (343)
T 1ceo_A 30 TEKDIETIAEAGFDHVRLPFDYPIIESD-DN-VGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHH 91 (343)
T ss_dssp CHHHHHHHHHHTCCEEEEEEEGGGTBCS-SS-TTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEecCCHHHhccc-cC-CCcccHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 4678888889999999997542211100 00 01122456788999999999999998888764
No 211
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=73.82 E-value=5.6 Score=33.68 Aligned_cols=66 Identities=11% Similarity=0.032 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCC---CCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSR---TQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
.+.+++.++.++++|++.|+++........ +.+......-+...+.+.++++.|+++||.+.++.+
T Consensus 44 ~~~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~ 112 (353)
T 2c0h_A 44 KSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLW 112 (353)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEcc
Confidence 457788999999999999999643221100 000000000014577899999999999999988763
No 212
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=73.33 E-value=14 Score=30.36 Aligned_cols=120 Identities=12% Similarity=0.021 Sum_probs=68.3
Q ss_pred HHHHHHcCCCeEEecCCCC-----CC--CHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 27 YRVAAELGFRYIESWFPPV-----GV--TLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~-----~~--~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
.+.+-+.|.+.|++..+.+ .. -.+++++..+.. |..+-.+- +.+.-. -+.+.+++++|.
T Consensus 117 a~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIl-----Et~~Lt--------~eei~~A~~ia~ 183 (260)
T 3r12_A 117 AIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVVKVII-----ETCYLD--------TEEKIAACVISK 183 (260)
T ss_dssp HHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEEC-----CGGGCC--------HHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcEEEEE-----eCCCCC--------HHHHHHHHHHHH
Confidence 4456678999999997732 11 124444444443 33332221 111111 246788999999
Q ss_pred HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 99 ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
..|+.+|.+-+|..+..- +. .-++.+++.+ ..+.||+.+ . -+.|.+++++++ + .
T Consensus 184 eaGADfVKTSTGf~~~GA-----T~----edV~lm~~~v--g~~v~VKaA---------G--GIrt~~~al~mi---~-a 237 (260)
T 3r12_A 184 LAGAHFVKTSTGFGTGGA-----TA----EDVHLMKWIV--GDEMGVKAS---------G--GIRTFEDAVKMI---M-Y 237 (260)
T ss_dssp HTTCSEEECCCSSSSCCC-----CH----HHHHHHHHHH--CTTSEEEEE---------S--SCCSHHHHHHHH---H-T
T ss_pred HhCcCEEEcCCCCCCCCC-----CH----HHHHHHHHHh--CCCceEEEe---------C--CCCCHHHHHHHH---H-c
Confidence 999999999887643321 11 2244444443 123444444 1 267889999999 4 4
Q ss_pred CCCceeE
Q psy13372 179 GISNVQL 185 (273)
Q Consensus 179 ~~~~~g~ 185 (273)
+...+|.
T Consensus 238 GA~RiGt 244 (260)
T 3r12_A 238 GADRIGT 244 (260)
T ss_dssp TCSEEEE
T ss_pred CCceeec
Confidence 5455664
No 213
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=73.20 E-value=12 Score=31.51 Aligned_cols=59 Identities=14% Similarity=0.053 Sum_probs=41.1
Q ss_pred ccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeE
Q psy13372 6 FKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQV 64 (273)
Q Consensus 6 ~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~ 64 (273)
|++-+.+=+.+.+-..++++.++.+++.|++.|-+.--..-....++.+..++.|+.+.
T Consensus 13 ~~~DLH~Hs~~SDG~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~~i 71 (301)
T 3o0f_A 13 QGWDIHCHTVFSDGTETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEIGLPLL 71 (301)
T ss_dssp SSEEEEECCTTTTCSSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHHTCCEE
T ss_pred ceEEeeECCCCCCCCCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhcCCEEE
Confidence 45555443344443348999999999999999999732222456777778888898775
No 214
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=73.12 E-value=42 Score=28.47 Aligned_cols=67 Identities=10% Similarity=0.049 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
.....++.....|+..+.++.|....... +. .+...-.+++.+++ ..++.+..=. -+.+++++
T Consensus 230 ~~~~la~~L~~~Gvd~i~vs~g~~~~~~~-~~-~~~~~~~~~~~ik~------~~~iPVi~~G---------gI~s~e~a 292 (340)
T 3gr7_A 230 DYVPYAKRMKEQGVDLVDVSSGAIVPARM-NV-YPGYQVPFAELIRR------EADIPTGAVG---------LITSGWQA 292 (340)
T ss_dssp GHHHHHHHHHHTTCCEEEEECCCSSCCCC-CC-CTTTTHHHHHHHHH------HTTCCEEEES---------SCCCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCCccCCCC-CC-CccccHHHHHHHHH------HcCCcEEeeC---------CCCCHHHH
Confidence 34556777788999999998765322100 00 11111122332322 3356544221 25689999
Q ss_pred HHHH
Q psy13372 169 ERLI 172 (273)
Q Consensus 169 ~~li 172 (273)
.+++
T Consensus 293 ~~~L 296 (340)
T 3gr7_A 293 EEIL 296 (340)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 215
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=73.05 E-value=15 Score=30.58 Aligned_cols=142 Identities=9% Similarity=0.014 Sum_probs=76.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC-C-CCC---HHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP-V-GVT---LEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~-~-~~~---~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
.+++ .+..+-++||+.|.+.... + +.. .+++.+...+.|+.+-. ++.-.+.+.+.. ..+ .....-..+.
T Consensus 91 ~~~e-~i~~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~-~~~---~~yT~Peea~ 165 (288)
T 3q94_A 91 SSFE-KCKEAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVI-AEG---VIYADPAECK 165 (288)
T ss_dssp CSHH-HHHHHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCG-GGG---CBCCCHHHHH
T ss_pred CCHH-HHHHHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcC-Ccc---ccCCCHHHHH
Confidence 3555 5566668999999999752 1 122 47888888899998874 443222111110 000 0011123455
Q ss_pred HHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHH
Q psy13372 95 QYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRE 174 (273)
Q Consensus 95 ~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~ 174 (273)
++.++.|+..+-+-.|..=.... ..+.-.+++ |+++.+. .++.+.++--+ ..+.++..+.+
T Consensus 166 ~Fv~~TgvD~LAvaiGt~HG~Y~--~~p~Ld~~~----L~~I~~~---v~vpLVlHGgS--------G~~~e~i~~ai-- 226 (288)
T 3q94_A 166 HLVEATGIDCLAPALGSVHGPYK--GEPNLGFAE----MEQVRDF---TGVPLVLHGGT--------GIPTADIEKAI-- 226 (288)
T ss_dssp HHHHHHCCSEEEECSSCBSSCCS--SSCCCCHHH----HHHHHHH---HCSCEEECCCT--------TCCHHHHHHHH--
T ss_pred HHHHHHCCCEEEEEcCcccCCcC--CCCccCHHH----HHHHHHh---cCCCEEEeCCC--------CCCHHHHHHHH--
Confidence 56667899998886665411100 002222332 3333333 37999988421 33455555555
Q ss_pred HhhcCCCceeEeeecc
Q psy13372 175 LRAHGISNVQLQFDFF 190 (273)
Q Consensus 175 ~~~~~~~~~g~~~D~~ 190 (273)
+ . --.++++||-
T Consensus 227 -~-~--Gv~KiNi~Td 238 (288)
T 3q94_A 227 -S-L--GTSKINVNTE 238 (288)
T ss_dssp -H-T--TEEEEEECHH
T ss_pred -H-c--CCeEEEEChH
Confidence 3 2 3478888873
No 216
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=72.93 E-value=8.3 Score=33.05 Aligned_cols=95 Identities=12% Similarity=0.069 Sum_probs=58.0
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc------cCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYY------LSS 164 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~------~~~ 164 (273)
++.++..+++|+..|+++....... ...-+...+.|.++++.|.++||.+.|+.+......... -.+
T Consensus 88 ~~di~~ik~~G~N~VRi~~~~~~~~-------~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~ 160 (359)
T 4hty_A 88 KKHFEVIRSWGANVVRVPVHPRAWK-------ERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTT 160 (359)
T ss_dssp HHHHHHHHHTTCSEEEEEECHHHHH-------HHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCC
T ss_pred HHHHHHHHhcCCCEEEEeccHHHhh-------ccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhH
Confidence 3456778999999999964321100 112245678899999999999999999886531000111 123
Q ss_pred HHHHHHHHHHH-hhc-CCCceeEeeeccccc
Q psy13372 165 FRVAERLIREL-RAH-GISNVQLQFDFFNAQ 193 (273)
Q Consensus 165 ~~~~~~li~~~-~~~-~~~~~g~~~D~~h~~ 193 (273)
.+...++++++ +.. ++|++ +.++++|-.
T Consensus 161 ~~~~~~~~~~la~ryk~~p~V-i~~el~NEP 190 (359)
T 4hty_A 161 KGETFDFWRRVSERYNGINSV-AFYEIFNEP 190 (359)
T ss_dssp HHHHHHHHHHHHHHTTTCTTE-EEEESCSEE
T ss_pred HHHHHHHHHHHHHHhCCCCcE-EEEEeccCC
Confidence 55666666332 333 45664 457887753
No 217
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=72.73 E-value=40 Score=27.94 Aligned_cols=132 Identities=13% Similarity=-0.017 Sum_probs=75.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 88 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIA-GTG------TND--------TEKSIQ 88 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------ccc--------HHHHHH
Confidence 4677788888999999988864221 122 22233333333 44432 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++.. ++.+.+-|.+.. ...--+++...++.
T Consensus 89 la~~a~~~Gadavlv~~P~y~~~---------~~~~l~~~f~~ia~a~---~lPiilYn~P~~---tg~~l~~~~~~~La 153 (292)
T 3daq_A 89 ASIQAKALGADAIMLITPYYNKT---------NQRGLVKHFEAIADAV---KLPVVLYNVPSR---TNMTIEPETVEILS 153 (292)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC---------CHHHHHHHHHHHHHHH---CSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCCC---------CHHHHHHHHHHHHHhC---CCCEEEEecccc---cCCCCCHHHHHHHh
Confidence 77788889999886654332111 2356777777776655 788888886421 12334566666776
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ + ||+--.=|.
T Consensus 154 ---~-~--pnivgiK~s 164 (292)
T 3daq_A 154 ---Q-H--PYIVALKDA 164 (292)
T ss_dssp ---T-S--TTEEEEEEC
T ss_pred ---c-C--CCEEEEEeC
Confidence 5 3 785544443
No 218
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=72.64 E-value=10 Score=30.43 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=53.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC-CCCC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP-VGVT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~-~~~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
-+.+.+++.+++.|.+.|-+. |. +... .+.+.++..++|+ .+- |.+ |.. ++++...++.
T Consensus 145 V~vetAiaml~dmG~~SvKff-Pm~Gl~~l~E~~avAka~a~~g~---~lE-PTG---GId---------l~N~~~I~~i 207 (249)
T 3m0z_A 145 VPLETAIALLKDMGGSSIKYF-PMGGLKHRAEFEAVAKACAAHDF---WLE-PTG---GID---------LENYSEILKI 207 (249)
T ss_dssp EEHHHHHHHHHHTTCCEEEEC-CCTTTTTHHHHHHHHHHHHHTTC---EEE-EBS---SCC---------TTTHHHHHHH
T ss_pred eeHHHHHHHHHHcCCCeeeEe-ecCCcccHHHHHHHHHHHHHcCc---eEC-CCC---Ccc---------HhhHHHHHHH
Confidence 389999999999999999995 53 2233 4556677788998 222 222 121 3577889999
Q ss_pred HHHcCCCeEEecCCC
Q psy13372 97 ACALNIPAIHIMSGK 111 (273)
Q Consensus 97 a~~lG~~~i~~~~G~ 111 (273)
|-..|++.|.-|...
T Consensus 208 ~l~aGv~~viPHIYs 222 (249)
T 3m0z_A 208 ALDAGVSKIIPHIYS 222 (249)
T ss_dssp HHHHTCSCBCCBCCG
T ss_pred HHHcCCCeecccccc
Confidence 999999999877543
No 219
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=72.21 E-value=26 Score=30.77 Aligned_cols=168 Identities=12% Similarity=0.025 Sum_probs=88.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC----CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCc---hhHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP----VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVK---GKESEFRASLEKTI 94 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i 94 (273)
.+...|. +.|++--.+|.+. ...-+.++-+..-++|-.|..-+++.....++...- +......+..++++
T Consensus 28 gmGT~L~---~~G~~~~~~ws~~l~l~~Pe~V~~iH~~Yl~AGAdII~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av 104 (406)
T 1lt8_A 28 GFVFALE---KRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGSNVMQTFTFYASEDKLENRGNYVLEKISGQEVNEAAA 104 (406)
T ss_dssp CHHHHHH---HHTSSCTTTCCCTHHHHCHHHHHHHHHHHHHTTCSEEECSCTTCSSCC-------------CHHHHHHHH
T ss_pred ccchHHH---HCCCCCCcccchHhhccCHHHHHHHHHHHHHhCccceeccccccCHHHHHhcCCccchhHHHHHHHHHHH
Confidence 5566555 4577621123221 011234555555678999998777643111121100 00123345677777
Q ss_pred HHHHHcCC--CeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 95 QYACALNI--PAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT-ALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 95 ~~a~~lG~--~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
++|++.-. +..+. |..++... -. .....+.+.+..++.++...+.||. |.+|+++ +..++..+
T Consensus 105 ~LAreAa~~~~~~VA--GsIGP~g~-~l-~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~----------~~~Eakaa 170 (406)
T 1lt8_A 105 DIARQVADEGDALVA--GGVSQTPS-YL-SAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFE----------HVEEAVWA 170 (406)
T ss_dssp HHHHHHHTTTTCEEE--EEECCCHH-HH-TTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCS----------CHHHHHHH
T ss_pred HHHHHHHhcCCCEEE--EEcCCccc-cc-CCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccC----------CHHHHHHH
Confidence 77776532 22222 22221100 00 1235677788888877777778886 8999853 45666666
Q ss_pred HHHHhhcCCCc-eeEeeecccccccCCChHHHHHhcC
Q psy13372 172 IRELRAHGISN-VQLQFDFFNAQRICGDLTHTFGACR 207 (273)
Q Consensus 172 i~~~~~~~~~~-~g~~~D~~h~~~~~~~~~~~i~~~~ 207 (273)
++.+++.+.|- +.++++...- ..|.++.+.+..+.
T Consensus 171 ~~a~~~~~lPv~iS~T~~~~G~-l~G~~~~~~~~~l~ 206 (406)
T 1lt8_A 171 VETLIASGKPVAATMAIGPEGD-LHGVPPGEAAVRLV 206 (406)
T ss_dssp HHHHGGGTSCEEEEECCBTTBC-TTCCCHHHHHHHHH
T ss_pred HHHHHHhCCcEEEEEEECCCCC-cCCCcHHHHHHHhh
Confidence 64446666563 6666643222 66888887777663
No 220
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=72.18 E-value=42 Score=27.95 Aligned_cols=133 Identities=13% Similarity=-0.000 Sum_probs=75.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC---CeeEEEecCCccccCCCCCchhHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG---LKQVLINTEVDENFGYAAVKGKESEFRASLE 91 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g---L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia-Gvg------~~~--------t~~ai 93 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA-GAG------SNA--------THEAV 93 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE-ECC------CSS--------HHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE-eCC------CCC--------HHHHH
Confidence 4677788888999999988865321 122 22333333332 44433 221 111 23455
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERL 171 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~l 171 (273)
+..+.|+++|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~~------s---~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~L 158 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNKP------T---QQGLYEHYKAIAQS---VDIPVLLYNVPGR---TGCEISTDTIIKL 158 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---CSSCEEEEECHHH---HSCCCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCC------C---HHHHHHHHHHHHHh---CCCCEEEEeCchh---hCcCCCHHHHHHH
Confidence 677788899999886654333111 1 35667777666554 4788888886431 1233467777777
Q ss_pred HHHHhhcCCCceeEeeec
Q psy13372 172 IRELRAHGISNVQLQFDF 189 (273)
Q Consensus 172 i~~~~~~~~~~~g~~~D~ 189 (273)
. +.+ ||+--.=|.
T Consensus 159 a---~~~--pnivgiKds 171 (301)
T 3m5v_A 159 F---RDC--ENIYGVKEA 171 (301)
T ss_dssp H---HHC--TTEEEEEEC
T ss_pred H---hcC--CCEEEEEeC
Confidence 7 644 664433343
No 221
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=72.16 E-value=8.4 Score=38.07 Aligned_cols=103 Identities=11% Similarity=0.155 Sum_probs=62.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHcC-------CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 79 VKGKESEFRASLEKTIQYACALN-------IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG-------~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+.+..+...+.+.++|+.....+ ...|.+-+.......+ +...+..++.+.++++++++.|+++|+.+.|--
T Consensus 203 ~~~eA~~~~~~y~~~i~~i~~~~~~~~~~~~~~vSvKlSalg~~~~-~~~~~~~~~~~~~rl~~l~~~A~~~~v~v~iDa 281 (1001)
T 3haz_A 203 TAADARRYFDAYASAIETIGKAAGNHALPDRPGISVKLSALHPRFE-AISRARVMVELVPQLLDLAQRAKAHDLNFTVDA 281 (1001)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCCSCCTTSSCEEEECHHHHCTTCS-GGGHHHHHHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCeEEEeccccCcchh-hhhhhhHHHHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 45566667777888888766644 3467664322222211 111345577899999999999999999999876
Q ss_pred CCCCCCCCcccCCHHHHHHHHHHH-hh---cCCCceeEeeecc
Q psy13372 152 VNQHSVPGYYLSSFRVAERLIREL-RA---HGISNVQLQFDFF 190 (273)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~li~~~-~~---~~~~~~g~~~D~~ 190 (273)
.. ....+.+.+++++| ++ .+.+.+|+++-.+
T Consensus 282 Ee--------~~~~~~tl~~~~~l~~~~~~~~~~~vg~t~QaY 316 (1001)
T 3haz_A 282 EE--------ADRLELSLDVIAATLADPSLKGWDGFGLAIQAY 316 (1001)
T ss_dssp CC--------GGGHHHHHHHHHHHHTSGGGTTCCCEEEEEETT
T ss_pred Cc--------chhhHHHHHHHHHHhcccccCCCCceEEEEeCc
Confidence 32 12334445555332 22 1346678776544
No 222
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=72.08 E-value=38 Score=30.00 Aligned_cols=114 Identities=11% Similarity=-0.048 Sum_probs=64.5
Q ss_pred HHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEE
Q psy13372 27 YRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIH 106 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~ 106 (273)
+..+.+.|..++.............+.+...+.|+.........+.........+..+..++..++.++.....+...+.
T Consensus 150 ~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~ 229 (476)
T 4aql_A 150 VRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVK 229 (476)
T ss_dssp HHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred HHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceE
Confidence 45677899999875433221223457788889999876322211111100011234455566677777666555555555
Q ss_pred ecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 107 IMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 107 ~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+..+..... . ..-+.|+++.++|+++|+.+.++.
T Consensus 230 ~~l~p~~~~------~-----~s~e~l~~~~~~A~~~g~~v~~H~ 263 (476)
T 4aql_A 230 PIVTPRFSL------S-----CSETLMGELGNIAKTRDLHIQSHI 263 (476)
T ss_dssp ECBEECCTT------T-----SCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEeCCcCC------c-----CCHHHHHHHHHHHHHcCCceEEEe
Confidence 533211110 0 112567888999999999998875
No 223
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=72.03 E-value=41 Score=27.83 Aligned_cols=132 Identities=11% Similarity=-0.053 Sum_probs=72.9
Q ss_pred CHHHHHHHHHH-cCCCeEEecCCCCC---CCH----HHHHHHHHHcCCeeEEE-ecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAE-LGFRYIESWFPPVG---VTL----EQLVAAQTRHGLKQVLI-NTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~-~G~~~vEl~~~~~~---~~~----~~~~~~l~~~gL~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+ .|.++|=+.+.-++ .+. +-++...+..+=++..+ ++- ..+ .+...+
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg------~~~--------t~~ai~ 90 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG------SVN--------LKEAVE 90 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC------CCC--------HHHHHH
Confidence 36677888888 99999998864211 122 22333343333233322 221 111 234456
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 91 la~~a~~~Gadavlv~~P~y~~~------~---~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 155 (293)
T 1f6k_A 91 LGKYATELGYDCLSAVTPFYYKF------S---FPEIKHYYDTIIAE---TGSNMIVYSIPFL---TGVNMGIEQFGELY 155 (293)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---HCCCEEEEECHHH---HCCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC------C---HHHHHHHHHHHHHh---CCCCEEEEECccc---cCcCCCHHHHHHHh
Confidence 77778889999876644332111 2 35677777776654 4678888886421 11233566666666
Q ss_pred HHHhhcCCCceeEeee
Q psy13372 173 RELRAHGISNVQLQFD 188 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D 188 (273)
+ .||+--.=|
T Consensus 156 ---~---~pnIvgiK~ 165 (293)
T 1f6k_A 156 ---K---NPKVLGVKF 165 (293)
T ss_dssp ---T---STTEEEEEE
T ss_pred ---c---CCCEEEEEE
Confidence 4 377543334
No 224
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=71.77 E-value=5 Score=35.00 Aligned_cols=66 Identities=17% Similarity=0.132 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCC---------CCCCCCCCCc-----chHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTE---------SSRTQPIASE-----DPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~---------~~~~~~~~~~-----~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+.+++.++.++++|.+.|+++..... .-...|-... ..-+...+.|.++++.|+++||.+.|-.++
T Consensus 43 ~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~ 122 (383)
T 3pzg_A 43 RMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVN 122 (383)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 46778999999999999999743210 0000000000 000244678999999999999998888754
No 225
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=71.72 E-value=38 Score=27.37 Aligned_cols=126 Identities=11% Similarity=0.024 Sum_probs=74.1
Q ss_pred cCHHHHHHHHHHcCCCeEEecCC-CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFP-PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.+.++.++.+.+.|.+..=+..+ ......+.+.+.+++++-.+..+.. ..+... .+.++++ ..
T Consensus 40 ~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~-------v~p~~~-----~~el~~~----~~ 103 (288)
T 2ffi_A 40 APLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVPGQLRGVVM-------LERDVE-----QATLAEM----AR 103 (288)
T ss_dssp BCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHSTTTBCCBBC-------CCSSCC-----HHHHHHH----HT
T ss_pred CCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCCCCEEEEEE-------eCCCCC-----HHHHHHH----HH
Confidence 37899999999999997655443 1124456677778887633322211 111111 1333333 34
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
.|++-|.+.+...+.. . .. -+.+.++.+.|+++|+.+.++.-. ....++.+++ ++.
T Consensus 104 ~g~~Gi~~~~~~~~~~-~----~~------~~~~~~~~~~a~~~~lpv~iH~~~---------~~~~~~~~~~---~~~- 159 (288)
T 2ffi_A 104 LGVRGVRLNLMGQDMP-D----LT------GAQWRPLLERIGEQGWHVELHRQV---------ADIPVLVRAL---QPY- 159 (288)
T ss_dssp TTCCEEECCCSSSCCC-C----TT------STTTHHHHHHHHHHTCEEEECSCT---------TTHHHHHHHH---TTT-
T ss_pred CCCeEEEEecccCCCC-C----cc------cHHHHHHHHHHHHCCCeEEEeech---------hhHHHHHHHH---HHC-
Confidence 6999888765432111 0 10 134666778888999999997621 1355667777 775
Q ss_pred CCceeEeee
Q psy13372 180 ISNVQLQFD 188 (273)
Q Consensus 180 ~~~~g~~~D 188 (273)
| +.++++
T Consensus 160 -p-l~~vi~ 166 (288)
T 2ffi_A 160 -G-LDIVID 166 (288)
T ss_dssp -T-CCEEES
T ss_pred -C-CCEEEE
Confidence 6 777765
No 226
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=71.54 E-value=11 Score=31.46 Aligned_cols=61 Identities=5% Similarity=-0.020 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++.++..+.+|++.|+++.+......+.+ .-..-+...+.+.++++.|.++|+.+.+..+.
T Consensus 44 ~~d~~~l~~~G~n~vRi~i~w~~~~~~~~--~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~ 104 (320)
T 3nco_A 44 DEYFKIIKERGFDSVRIPIRWSAHISEKY--PYEIDKFFLDRVKHVVDVALKNDLVVIINCHH 104 (320)
T ss_dssp HHHHHHHHHHTCCEEEECCCGGGSBCSST--TCCBCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHCCCCEEEEeeehHHhcCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 45677888999999999754221100000 11122345788999999999999999998754
No 227
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=71.36 E-value=7.3 Score=32.43 Aligned_cols=62 Identities=13% Similarity=-0.028 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcch----HHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDP----YTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~----~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
....+.++++++.|..+|++++++..-.. ++.+ ++.. ++-+.+.|++..+...+.||++-+=
T Consensus 82 ~~G~~~l~~iv~~c~~lGI~~LTlYaFStENwkR-----p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvrvi 148 (284)
T 2vg3_A 82 KMGEAVVIDIACGAIELGIKWLSLYAFSTENWKR-----SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWV 148 (284)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEETTGGGS-----CHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeccCcccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEe
Confidence 45678999999999999999999865322 2222 2222 3344555666555667788887653
No 228
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=71.26 E-value=38 Score=27.15 Aligned_cols=152 Identities=14% Similarity=0.117 Sum_probs=84.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
...+..+.+.+.|++.||+.+... ...+.++++.++.+--+...++ . + +. ..++.|...|
T Consensus 47 ~a~~~a~al~~gGi~~iEvt~~t~-~a~e~I~~l~~~~~~~~iGaGT-----V-l--t~-----------~~a~~Ai~AG 106 (232)
T 4e38_A 47 DIIPLGKVLAENGLPAAEITFRSD-AAVEAIRLLRQAQPEMLIGAGT-----I-L--NG-----------EQALAAKEAG 106 (232)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTCEEEEEC-----C-C--SH-----------HHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEeCCCC-CHHHHHHHHHHhCCCCEEeECC-----c-C--CH-----------HHHHHHHHcC
Confidence 566667777788999999987633 3455666665555322222221 1 1 11 2455566789
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCC
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS 181 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 181 (273)
+++++.+ + . + .++.+.++++|+.+. |+ +.|+.++.+-+ +.+..
T Consensus 107 A~fIvsP-~-~--~------------------~~vi~~~~~~gi~~i---------pG--v~TptEi~~A~----~~Gad 149 (232)
T 4e38_A 107 ATFVVSP-G-F--N------------------PNTVRACQEIGIDIV---------PG--VNNPSTVEAAL----EMGLT 149 (232)
T ss_dssp CSEEECS-S-C--C------------------HHHHHHHHHHTCEEE---------CE--ECSHHHHHHHH----HTTCC
T ss_pred CCEEEeC-C-C--C------------------HHHHHHHHHcCCCEE---------cC--CCCHHHHHHHH----HcCCC
Confidence 9999853 2 1 1 134566777899887 33 44788887777 45667
Q ss_pred ceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCc
Q psy13372 182 NVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEG 246 (273)
Q Consensus 182 ~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g 246 (273)
.+++ +.....++ .+.++.+...+.++-+.=. |-++...+-+.| +.|..+
T Consensus 150 ~vK~----FPa~~~gG--~~~lkal~~p~p~ip~~pt---------GGI~~~n~~~~l-~aGa~~ 198 (232)
T 4e38_A 150 TLKF----FPAEASGG--ISMVKSLVGPYGDIRLMPT---------GGITPSNIDNYL-AIPQVL 198 (232)
T ss_dssp EEEE----CSTTTTTH--HHHHHHHHTTCTTCEEEEB---------SSCCTTTHHHHH-TSTTBC
T ss_pred EEEE----CcCccccC--HHHHHHHHHHhcCCCeeeE---------cCCCHHHHHHHH-HCCCeE
Confidence 7887 22222211 3556655443333333322 555555555555 355443
No 229
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=71.22 E-value=40 Score=28.04 Aligned_cols=72 Identities=14% Similarity=0.114 Sum_probs=54.4
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEEEcc--CCCCCC----CCcccCCHHHHHHHHHHHhhcCCCceeEeeeccccccc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTALIEP--VNQHSV----PGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRI 195 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~--~~~~~~----~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~ 195 (273)
+...++.-++..++++++|+++||.+--|- +..... .....++|+++.+++ ++.+-..+.+.+=+.|-.+.
T Consensus 112 S~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv---~~TgvD~LAvaiGt~HG~Y~ 188 (288)
T 3q94_A 112 SHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLV---EATGIDCLAPALGSVHGPYK 188 (288)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHH---HHHCCSEEEECSSCBSSCCS
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHH---HHHCCCEEEEEcCcccCCcC
Confidence 445678889999999999999999888774 211100 122578999999999 99987888888888886654
Q ss_pred C
Q psy13372 196 C 196 (273)
Q Consensus 196 ~ 196 (273)
+
T Consensus 189 ~ 189 (288)
T 3q94_A 189 G 189 (288)
T ss_dssp S
T ss_pred C
Confidence 3
No 230
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=71.15 E-value=49 Score=28.34 Aligned_cols=27 Identities=11% Similarity=-0.082 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCC
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKT 112 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~ 112 (273)
..+.....++.....|+.++.++.|..
T Consensus 244 ~~~~~~~la~~L~~~Gvd~i~vs~g~~ 270 (363)
T 3l5l_A 244 TLEESIELARRFKAGGLDLLSVSVGFT 270 (363)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCcc
Confidence 356677788888899999999987653
No 231
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=71.10 E-value=16 Score=34.63 Aligned_cols=116 Identities=10% Similarity=-0.071 Sum_probs=68.4
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC-CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG-VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~-~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
....++.+.+.|.+.|-+...... .......+.+++.|+.+...-.+.+ ++. ++.+.....+++.+.++.+..+|
T Consensus 199 ~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~-d~~---dp~r~~~~~e~~~~~a~~l~~~G 274 (718)
T 3bg3_A 199 VFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGGVVEAAISYTG-DVA---DPSRTKYSLQYYMGLAEELVRAG 274 (718)
T ss_dssp HHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTSEEEEEEECCS-CTT---CTTCCTTCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCCeEEEEEEeec-ccc---CCCCCCCCHHHHHHHHHHHHHcC
Confidence 467788999999999988754220 1234444567788977653222211 111 11110012467778888888899
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+..|.+.-. .+.. .+.....+++.|++-.+ ++.|.++.|+.
T Consensus 275 a~~I~l~DT-~G~~------~P~~v~~lV~~lk~~~p-----~~~I~~H~Hnd 315 (718)
T 3bg3_A 275 THILCIKDM-AGLL------KPTACTMLVSSLRDRFP-----DLPLHIHTHDT 315 (718)
T ss_dssp CSEEEEECT-TSCC------CHHHHHHHHHHHHHHST-----TCCEEEECCCT
T ss_pred CCEEEEcCc-CCCc------CHHHHHHHHHHHHHhCC-----CCeEEEEECCC
Confidence 999988521 1121 34455566666655332 68899988754
No 232
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=70.88 E-value=46 Score=27.91 Aligned_cols=132 Identities=8% Similarity=-0.035 Sum_probs=73.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg------~~s--------t~eai~ 109 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIA-GTG------ANS--------TREAVA 109 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CcC--------HHHHHH
Confidence 4667788888999999988864221 122 22333344433 33332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 110 la~~A~~~Gadavlv~~P~y~~~------s---~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 174 (314)
T 3qze_A 110 LTEAAKSGGADACLLVTPYYNKP------T---QEGMYQHFRHIAEA---VAIPQILYNVPGR---TSCDMLPETVERLS 174 (314)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---SCSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCCC------C---HHHHHHHHHHHHHh---cCCCEEEEeCccc---cCCCCCHHHHHHHh
Confidence 77788899999886654332111 2 34566777666554 4788888886421 11233566666666
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 175 ---~---~pnIvgiKds 185 (314)
T 3qze_A 175 ---K---VPNIIGIKEA 185 (314)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEEcC
Confidence 4 3775444443
No 233
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=70.57 E-value=7.3 Score=34.18 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCC--CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESS--RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++.++..+.+|...|+++.+..... ...|. ... ...+.|+++++.|+++|+.+.|..|.
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~~~~py-~~~---~~l~~ld~vv~~a~~~Gi~VilDlH~ 136 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPY-VSG---LQESYLDQAIGWARNNSLKVWVDLHG 136 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCC-CCS---SHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccCCCCCC-ccc---cHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 5678888899999999976532111 00111 111 25678999999999999998888763
No 234
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=70.52 E-value=15 Score=31.35 Aligned_cols=62 Identities=6% Similarity=-0.041 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+..++..+.+|.+.|+++.+...-..+.+ ....-+...+.++++++.|.++|+.+.|..|..
T Consensus 45 ~~di~~i~~~G~n~vRipi~w~~~~~~~~--~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~ 106 (345)
T 3ndz_A 45 HAMINKIKEAGFNTLRLPVTWDGHMGAAP--EYTIDQTWMKRVEEIANYAFDNDMYVIINLHHE 106 (345)
T ss_dssp HHHHHHHHHHTCCEEEECCCCTTSBCCTT--TCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSC
T ss_pred HHHHHHHHHCCCCEEEEeeehHHhCCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEecCCc
Confidence 34666678899999999875432110000 111124567889999999999999999988653
No 235
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=70.45 E-value=29 Score=31.10 Aligned_cols=118 Identities=10% Similarity=0.009 Sum_probs=63.6
Q ss_pred HHHHHHHHHHcCCCeEEec----CCCCCCCCCC-CCCC-cchHHH-HHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc
Q psy13372 90 LEKTIQYACALNIPAIHIM----SGKTESSRTQ-PIAS-EDPYTT-LKENLIYACAELERHSLTALIEPVNQHSVPGYYL 162 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~----~G~~~~~~~~-~~~~-~~~~~~-~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~ 162 (273)
-..++++++..|++++++. -|.--..... ..+. ...+.. -.+.++++++.++++|+++++---....+...+.
T Consensus 64 ~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d~~~~~y~ 143 (478)
T 3ues_A 64 VDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWDRTEESYG 143 (478)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCCSSCTTTT
T ss_pred HHHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHHhCCcccC
Confidence 4568999999999999873 3432111100 0000 000100 1356788899999999998887422211222222
Q ss_pred CCH-------HHHHHHHHHHhhcCCCceeEeeeccccccc-----CCC---hHHHHHhcCCcce
Q psy13372 163 SSF-------RVAERLIRELRAHGISNVQLQFDFFNAQRI-----CGD---LTHTFGACRDLIG 211 (273)
Q Consensus 163 ~~~-------~~~~~li~~~~~~~~~~~g~~~D~~h~~~~-----~~~---~~~~i~~~~~~i~ 211 (273)
... .++.+|+ ...+ |-..+-+|.++..-. .-+ +.+.++++.|.+.
T Consensus 144 ~~~~y~~~~~~ql~EL~---~~Yg-~~~~~W~Dg~~~~~~~~~~~~~~~~~~~~~i~~~qP~~v 203 (478)
T 3ues_A 144 KGKAYDDFYVGQLTELL---TQYG-PIFSVWLDGANGEGKNGKTQYYDWDRYYNVIRSLQPDAV 203 (478)
T ss_dssp SSHHHHHHHHHHHHHHH---HSSS-CCSEEEECCCCCCCTTSCCCCCCHHHHHHHHHHHCTTSE
T ss_pred chHHHHHHHHHHHHHHH---hcCC-cceEEEeeCCCCCCCccchhhhhHHHHHHHHHHHCcCEE
Confidence 222 2334444 5554 445899998653211 112 5567777888765
No 236
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=70.40 E-value=46 Score=31.59 Aligned_cols=99 Identities=7% Similarity=0.008 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCC---CCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTE---SSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLS 163 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~ 163 (273)
++.+++.|+..+..+...++.|+.... ..+..+. +.. -.+.+++++++|++.||++..+-.+..+.+++-..
T Consensus 165 ~~~~~~~id~ma~~K~N~~h~hl~Dd~~~~~~wr~~y-~~~----~~~~~~elv~ya~~rgI~vv~~i~P~~~~~~~~~~ 239 (737)
T 2v5d_A 165 HQDRLDQIKFYGENKLNTYIYAPKDDPYHREKWREPY-PES----EMQRMQELINASAENKVDFVFGISPGIDIRFDGDA 239 (737)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCSCCSTTTTTC------CT----THHHHHHHHHHHHHTTCEEEECCCCGGGCCCSSBT
T ss_pred HHHHHHHHHHHHHhCCeEEEEecccccchhhccCcCC-CHH----HHHHHHHHHHHHHHCCCEEEEecCCCccccCCCcc
Confidence 578899999999999999999874321 1111011 111 14578999999999999998554322111222111
Q ss_pred CHHHHHHHHHHHhh---cCCCceeEeeecc
Q psy13372 164 SFRVAERLIRELRA---HGISNVQLQFDFF 190 (273)
Q Consensus 164 ~~~~~~~li~~~~~---~~~~~~g~~~D~~ 190 (273)
.......|.+.+++ .+...+.+.+|=.
T Consensus 240 ~~~~~~~l~~~~~~~~~~g~~~f~ig~DEi 269 (737)
T 2v5d_A 240 GEEDFNHLITKAESLYDMGVRSFAIYWDDI 269 (737)
T ss_dssp THHHHHHHHHHHHHHHHHTCCEEEEECSSC
T ss_pred cHHHHHHHHHHHHHHHhcCCcEEEEcCccC
Confidence 13333444433333 4456667777643
No 237
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=70.23 E-value=8 Score=33.88 Aligned_cols=57 Identities=14% Similarity=0.127 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCC--CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESS--RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~--~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+..++..+.+|...|+++.+..... ...|. ... ..+.|.++++.|+++||.+.|-.|
T Consensus 76 e~D~~~ik~~G~N~VRipi~~~~~~~~~~~py-~~~----~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPY-VQG----QVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCC-CCC----HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEcccHHHccCCCCCcc-chh----HHHHHHHHHHHHHHCCCEEEEEec
Confidence 5678888899999999987643211 01121 111 357899999999999998777765
No 238
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=70.21 E-value=48 Score=30.63 Aligned_cols=46 Identities=17% Similarity=0.337 Sum_probs=37.8
Q ss_pred cCHHHHHHHHHHcCCCeEEecCC----------CC---CCCHHHHHHHHHHcCCeeEEE
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFP----------PV---GVTLEQLVAAQTRHGLKQVLI 66 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~----------~~---~~~~~~~~~~l~~~gL~i~~~ 66 (273)
.-+++.++.++++|+..|++-.+ ++ ..+++++.++++++||.+..-
T Consensus 32 ~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~Vilr 90 (595)
T 4e8d_A 32 EDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVR 90 (595)
T ss_dssp GGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEe
Confidence 36899999999999999999542 22 235899999999999999864
No 239
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=70.19 E-value=39 Score=26.81 Aligned_cols=149 Identities=17% Similarity=0.100 Sum_probs=85.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
......+.+.+-|++.||+.+.-. ...+.++++.++++--+...++- + ++ ..++.|...|
T Consensus 26 ~a~~~a~al~~gGi~~iEvt~~t~-~a~~~I~~l~~~~p~~~IGAGTV------l--t~-----------~~a~~ai~AG 85 (217)
T 3lab_A 26 HAIPMAKALVAGGVHLLEVTLRTE-AGLAAISAIKKAVPEAIVGAGTV------C--TA-----------DDFQKAIDAG 85 (217)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTSEEEEECC------C--SH-----------HHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCc-cHHHHHHHHHHHCCCCeEeeccc------c--CH-----------HHHHHHHHcC
Confidence 455566677777999999987643 45677777766665433333221 1 12 2345556689
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc------EEEEccCCCCCCCCcccCCHHHHHHHHHHH
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL------TALIEPVNQHSVPGYYLSSFRVAERLIREL 175 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv------~i~lE~~~~~~~~~~~~~~~~~~~~li~~~ 175 (273)
+++++.+ +. . .++.+.++++|+ .+. |+ +.|+.++.+.+
T Consensus 86 A~fivsP-~~---~------------------~evi~~~~~~~v~~~~~~~~~---------PG--~~TptE~~~A~--- 129 (217)
T 3lab_A 86 AQFIVSP-GL---T------------------PELIEKAKQVKLDGQWQGVFL---------PG--VATASEVMIAA--- 129 (217)
T ss_dssp CSEEEES-SC---C------------------HHHHHHHHHHHHHCSCCCEEE---------EE--ECSHHHHHHHH---
T ss_pred CCEEEeC-CC---c------------------HHHHHHHHHcCCCccCCCeEe---------CC--CCCHHHHHHHH---
Confidence 9999873 21 1 145567777888 666 22 45788877777
Q ss_pred hhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcC
Q psy13372 176 RAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREG 243 (273)
Q Consensus 176 ~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~g 243 (273)
+.+...+++. .....++ .+.++.+..-+.++.+.=. |-++...+-+.|+ .|
T Consensus 130 -~~Gad~vK~F----Pa~~~gG--~~~lkal~~p~p~i~~~pt---------GGI~~~N~~~~l~-aG 180 (217)
T 3lab_A 130 -QAGITQLKCF----PASAIGG--AKLLKAWSGPFPDIQFCPT---------GGISKDNYKEYLG-LP 180 (217)
T ss_dssp -HTTCCEEEET----TTTTTTH--HHHHHHHHTTCTTCEEEEB---------SSCCTTTHHHHHH-ST
T ss_pred -HcCCCEEEEC----ccccccC--HHHHHHHHhhhcCceEEEe---------CCCCHHHHHHHHH-CC
Confidence 4555667752 2221211 3556665544444444422 5566555555554 44
No 240
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=69.64 E-value=46 Score=29.46 Aligned_cols=111 Identities=13% Similarity=-0.013 Sum_probs=62.3
Q ss_pred HHHHHHHHHcCCCeEEecCC-CC---------CCCH---HHHHHHHHHcCCe-eEEEecCCccccCCCCCchhHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFP-PV---------GVTL---EQLVAAQTRHGLK-QVLINTEVDENFGYAAVKGKESEFRAS 89 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~-~~---------~~~~---~~~~~~l~~~gL~-i~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (273)
++.++.++++|+..|++... .+ ..+. .+..+.++++|+. +...-.. + -++- +.+.
T Consensus 153 ~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~dlI~-G-lPge---------t~e~ 221 (457)
T 1olt_A 153 LDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIY-G-LPKQ---------TPES 221 (457)
T ss_dssp THHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEEEEEE-S-CTTC---------CHHH
T ss_pred HHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEc-C-CCCC---------CHHH
Confidence 67888999999998888642 11 1233 3344556778887 5432111 1 1111 1456
Q ss_pred HHHHHHHHHHcCCCeEEecCCC-----CCCCCC-CCCCCcchHHHHHHHHHHHHHHHhhCCcE
Q psy13372 90 LEKTIQYACALNIPAIHIMSGK-----TESSRT-QPIASEDPYTTLKENLIYACAELERHSLT 146 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~-----~~~~~~-~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 146 (273)
+.+.++.+..+|...+.+.+-. ...... .+.... ..+...+.+..+.+...+.|..
T Consensus 222 ~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp-~~~~~~~~~~~~~~~L~~~Gy~ 283 (457)
T 1olt_A 222 FAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLP-SPQQKLDILQETIAFLTQSGYQ 283 (457)
T ss_dssp HHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSC-CHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCc-CHHHHHHHHHHHHHHHHHCCCe
Confidence 7788888889999988876322 110000 000001 1245566677777777788864
No 241
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=69.64 E-value=32 Score=34.60 Aligned_cols=112 Identities=10% Similarity=-0.097 Sum_probs=69.2
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI 102 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 102 (273)
.+.++.+.+.|.+.|-+..... -.......+.+++.|..+...-.+.. .+ .++.+-....+++.+.++.+..+|+
T Consensus 648 ~~~i~~a~~~g~d~irif~sl~~~~~~~~~i~~~~~~g~~v~~~i~~~~-~~---~d~~r~~~~~~~~~~~~~~~~~~Ga 723 (1165)
T 2qf7_A 648 KYFVRQAAKGGIDLFRVFDCLNWVENMRVSMDAIAEENKLCEAAICYTG-DI---LNSARPKYDLKYYTNLAVELEKAGA 723 (1165)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCS-CT---TCTTSGGGCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCcCEEEEEeeHHHHHHHHHHHHHHHhccceEEEEEEEec-cc---cCCCCCCCCHHHHHHHHHHHHHcCC
Confidence 5678889999999988865421 13456667778888977653211110 11 1121111235788888899999999
Q ss_pred CeEEecC--CCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 103 PAIHIMS--GKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 103 ~~i~~~~--G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
..|.+.- |.. .+.....+++.|++- .++.|.++.|+.
T Consensus 724 ~~i~l~DT~G~~---------~P~~~~~lv~~l~~~------~~~~i~~H~Hnd 762 (1165)
T 2qf7_A 724 HIIAVKDMAGLL---------KPAAAKVLFKALREA------TGLPIHFHTHDT 762 (1165)
T ss_dssp SEEEEEETTCCC---------CHHHHHHHHHHHHHH------CSSCEEEEECBT
T ss_pred CEEEEeCccCCc---------CHHHHHHHHHHHHHh------cCCeEEEEECCC
Confidence 9998852 322 344455556555542 268899988753
No 242
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=69.60 E-value=30 Score=28.76 Aligned_cols=100 Identities=11% Similarity=0.031 Sum_probs=57.7
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCc-hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVK-GKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTT 128 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~ 128 (273)
++-.+.+++.|+..+-+.+.-. .......+ ...+..++.+.++++.|.+.|...|.-.......-.+ ++...+.
T Consensus 44 ~~d~~~l~~~G~n~vRi~i~w~-~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~~~~----~~~~~~~ 118 (320)
T 3nco_A 44 DEYFKIIKERGFDSVRIPIRWS-AHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELYQA----PDKYGPV 118 (320)
T ss_dssp HHHHHHHHHHTCCEEEECCCGG-GSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHC----HHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEeeehH-HhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCcccccC----cHHHHHH
Confidence 4445556677776665532100 00000000 1123457899999999999999877543221110000 2345677
Q ss_pred HHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 129 LKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 129 ~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+.+.++++++..+.+.-.+++|.++-
T Consensus 119 ~~~~~~~ia~~~~~~~~vv~~~l~NE 144 (320)
T 3nco_A 119 LVEIWKQVAQAFKDYPDKLFFEIFNE 144 (320)
T ss_dssp HHHHHHHHHHHHTTSCTTEEEECCSC
T ss_pred HHHHHHHHHHHHcCCCceEEEEeccC
Confidence 88888888888888775568887653
No 243
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=69.46 E-value=48 Score=27.61 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+.+.+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 101 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA-GAG------TYD--------TAHSIR 101 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE-eCC------CCC--------HHHHHH
Confidence 4677788888999999988865321 122 22333344333 33332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+ |++.++.+.+-|.+.. ...--+++...++.
T Consensus 102 la~~a~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~v---a~a~~lPiilYn~P~~---tg~~l~~~~~~~La 166 (304)
T 3l21_A 102 LAKACAAEGAHGLLVVTPYYSKP---------PQRGLQAHFTAV---ADATELPMLLYDIPGR---SAVPIEPDTIRALA 166 (304)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC---------CHHHHHHHHHHH---HTSCSSCEEEEECHHH---HSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCCC---------CHHHHHHHHHHH---HHhcCCCEEEEeCccc---cCCCCCHHHHHHHh
Confidence 77788889999886654332111 234566666554 4455889998886421 11233555555555
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 167 ---~---~pnIvgiKds 177 (304)
T 3l21_A 167 ---S---HPNIVGVXDA 177 (304)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEECC
Confidence 3 4775544443
No 244
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=69.30 E-value=46 Score=27.31 Aligned_cols=81 Identities=11% Similarity=0.057 Sum_probs=53.0
Q ss_pred HHHHHHHHHc--CCCeEE-ecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAEL--GFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~--G~~~vE-l~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.+.+. |.+-|- ++.. ....+++...++++|..++.++.. ..|. |...++.++.+++.++.|.+.
T Consensus 88 ~~v~~aal~a~~Ga~iINdvs~~--~d~~~~~~~~~a~~~~~vv~m~~d---~~G~---p~t~~~~~~~l~~~~~~a~~~ 159 (271)
T 2yci_X 88 PDAIEAGLKVHRGHAMINSTSAD--QWKMDIFFPMAKKYEAAIIGLTMN---EKGV---PKDANDRSQLAMELVANADAH 159 (271)
T ss_dssp HHHHHHHHHHCCSCCEEEEECSC--HHHHHHHHHHHHHHTCEEEEESCB---TTBC---CCSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEEEECCCC--ccccHHHHHHHHHcCCCEEEEecC---CCCC---CCCHHHHHHHHHHHHHHHHHC
Confidence 4455555555 666553 3321 112367788899999998887652 1222 223455678899999999999
Q ss_pred CCCe--EEecCCCC
Q psy13372 101 NIPA--IHIMSGKT 112 (273)
Q Consensus 101 G~~~--i~~~~G~~ 112 (273)
|.+. |.+-||..
T Consensus 160 Gi~~~~IilDPg~g 173 (271)
T 2yci_X 160 GIPMTELYIDPLIL 173 (271)
T ss_dssp TCCGGGEEEECCCC
T ss_pred CCCcccEEEecCCC
Confidence 9995 88887754
No 245
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=69.26 E-value=9 Score=31.90 Aligned_cols=61 Identities=7% Similarity=-0.007 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++.++..+.+|++.|+++.+......+.+. . ..-+...+.+.++++.|+++|+.+.|..+.
T Consensus 36 ~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~-~-~~~~~~~~~~d~~v~~a~~~Gi~vild~h~ 96 (317)
T 3aof_A 36 DEFFDIIKEAGFSHVRIPIRWSTHAYAFPP-Y-KIMDRFFKRVDEVINGALKRGLAVVINIHH 96 (317)
T ss_dssp THHHHHHHHHTCSEEEECCCGGGGBCSSTT-C-CBCHHHHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred HHHHHHHHHcCCCEEEEeccHHHhcCCCCC-C-cCCHHHHHHHHHHHHHHHHCCCEEEEEecC
Confidence 345666778999999997542111000000 0 111345778999999999999999998754
No 246
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=69.12 E-value=40 Score=26.51 Aligned_cols=71 Identities=6% Similarity=0.014 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHcCCCeEEecC------CCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF------PPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~------~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
++.+.++.+.+.|.+.|++.. +.-....+.++++.+..+..+... +. .+ +++ +.++
T Consensus 24 ~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~~~~~~v~-l~------vn-d~~----------~~v~ 85 (230)
T 1rpx_A 24 KLGEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPITDLPLDVH-LM------IV-EPD----------QRVP 85 (230)
T ss_dssp GHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGCCSCEEEE-EE------SS-SHH----------HHHH
T ss_pred HHHHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhccCCcEEEE-EE------ec-CHH----------HHHH
Confidence 788999999999999999973 211133555555444435444332 21 11 221 4667
Q ss_pred HHHHcCCCeEEecCC
Q psy13372 96 YACALNIPAIHIMSG 110 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G 110 (273)
.+...|+..+++|..
T Consensus 86 ~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 86 DFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHTTCSEEEEECS
T ss_pred HHHHcCCCEEEEEec
Confidence 777899999999853
No 247
>3btn_A Antizyme inhibitor 1; TIM-like A/B barrel domain and A sheet domain, structural genomics, israel structural proteomics center, ISPC; 2.05A {Mus musculus}
Probab=69.03 E-value=61 Score=28.59 Aligned_cols=91 Identities=7% Similarity=-0.008 Sum_probs=55.1
Q ss_pred HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecC-CCCCCCCCCCCCCcchHHHH
Q psy13372 51 QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMS-GKTESSRTQPIASEDPYTTL 129 (273)
Q Consensus 51 ~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~-G~~~~~~~~~~~~~~~~~~~ 129 (273)
++.+.+++.||++..++++.+.. . .+++.....++.++..++.+.++|.+.-.+.. |+.+.. . ..++..
T Consensus 179 ~~~~~~~~~~l~~~Gl~~H~gs~--~-~d~~~~~~~~~~~~~~~~~~~~~G~~~~~ldiGGG~~~~------~-~~~~~~ 248 (448)
T 3btn_A 179 HLLECAKELDVQIIGVKFHVSSA--C-KEYQVYVHALSDARCVFDMAGEFGFTMNMLDIGGGFTGT------E-IQLEEV 248 (448)
T ss_dssp HHHHHHHHHTCEEEEEECCCCTT--C-CCTTHHHHHHHHHHHHHHHHHHTTCCCCEEECCSCCCSC------H-HHHHHH
T ss_pred HHHHHHHhCCCCEEEEEEECCCC--C-CCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEeCCCcCCC------C-CCHHHH
Confidence 44445556699999888765421 1 24555666777788889988898865333333 333111 1 135566
Q ss_pred HHHHHHHHHHHh--hCCcEEEEcc
Q psy13372 130 KENLIYACAELE--RHSLTALIEP 151 (273)
Q Consensus 130 ~~~l~~l~~~a~--~~gv~i~lE~ 151 (273)
.+.++...+..- ..++++.+||
T Consensus 249 ~~~v~~~i~~~~p~~~~~~l~~Ep 272 (448)
T 3btn_A 249 NHVISPLLDIYFPEGSGIQIISEP 272 (448)
T ss_dssp HHHHHHHHHHHSCTTSCCEEEECC
T ss_pred HHHHHHHHHHHhcccCCcEEEEeC
Confidence 666666554331 2468999998
No 248
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=68.93 E-value=43 Score=26.86 Aligned_cols=130 Identities=14% Similarity=0.108 Sum_probs=80.2
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.++.+.++.+.++||++|=++ | ..+ ..++.++.. ++.+++...+ ..|..+ . +....-++.|-+
T Consensus 36 ~~i~~l~~~a~~~~~~aVcv~-p---~~v-~a~~~l~~~~~v~v~tvigF---P~G~~~-~-------~~k~~e~~~Av~ 99 (234)
T 1n7k_A 36 EDVRNLVREASDYGFRCAVLT-P---VYT-VKISGLAEKLGVKLCSVIGF---PLGQAP-L-------EVKLVEAQTVLE 99 (234)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-H---HHH-HHHHHHHHHHTCCEEEEEST---TTCCSC-H-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEc-h---HHh-eeehHhCCCCCceEEEEeCC---CCCCCc-H-------HHHHHHHHHHHH
Confidence 367888999999999999875 2 234 556667776 8888765432 122211 1 223345566777
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCCCCCCcccCCHHHHHHHHHHHhh
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQHSVPGYYLSSFRVAERLIRELRA 177 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~ 177 (273)
+||..|-++.- .+.. .+ .+.+.+.++.+.+.++|+. +.+|+. ++ +.++..+.+|-..+
T Consensus 100 ~GAdEID~vin-ig~~------~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~--------~L-~~e~i~~a~ria~e 159 (234)
T 1n7k_A 100 AGATELDVVPH-LSLG------PE----AVYREVSGIVKLAKSYGAVVKVILEAP--------LW-DDKTLSLLVDSSRR 159 (234)
T ss_dssp HTCCEEEECCC-GGGC------HH----HHHHHHHHHHHHHHHTTCEEEEECCGG--------GS-CHHHHHHHHHHHHH
T ss_pred cCCCEEEEecc-chHH------HH----HHHHHHHHHHHHHhhcCCeEEEEEecc--------CC-CHHHHHHHHHHHHH
Confidence 99999877642 1111 12 7778888889999887765 488973 23 34554444422266
Q ss_pred cCCCceeEe
Q psy13372 178 HGISNVQLQ 186 (273)
Q Consensus 178 ~~~~~~g~~ 186 (273)
.+...++..
T Consensus 160 aGADfVKTs 168 (234)
T 1n7k_A 160 AGADIVKTS 168 (234)
T ss_dssp TTCSEEESC
T ss_pred hCCCEEEeC
Confidence 666656654
No 249
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=68.91 E-value=50 Score=29.32 Aligned_cols=145 Identities=14% Similarity=-0.019 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHcCCCe-EEecCC-------CCCCCH----HHHHHHHHHcCCee--EEEecCCccc-cCCCCCchhHHHH
Q psy13372 22 NYLDKYRVAAELGFRY-IESWFP-------PVGVTL----EQLVAAQTRHGLKQ--VLINTEVDEN-FGYAAVKGKESEF 86 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~-vEl~~~-------~~~~~~----~~~~~~l~~~gL~i--~~~~~~~~~~-~~~~~~~~~~~~~ 86 (273)
.+..+++.+++.+..- ||.... |....+ .-++++.++.++.+ +.++..-++. .+. ....+++
T Consensus 33 ~i~Ail~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~~~A~~~~vPv~pV~LhlDHg~~~~w~---~~~~~~a 109 (450)
T 3txv_A 33 VIEAAMLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVGAIADRIEFPREKILLGGDHLGPNPWK---HLPADEA 109 (450)
T ss_dssp HHHHHHHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHHHHHHHTTCCGGGEEEEEEEESSGGGT---TSCHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHHHHHHHcCcCcccEEEECCCCCCcccc---cccHHHH
Confidence 5677788899988664 355432 111222 44556778889885 5555422111 011 2234566
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE---------EEcc-CCCC-
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA---------LIEP-VNQH- 155 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i---------~lE~-~~~~- 155 (273)
++.-...|..|-..|-+.|-+-.-..+.+.. .+...+.+.++..+|+++|++.++.. +-|- ++..
T Consensus 110 m~~a~e~i~~aI~AGFtSVMiD~S~~p~eeN----i~lt~evva~rtaeL~~~A~~~~~~~g~~e~~yviGtEvpvpGGa 185 (450)
T 3txv_A 110 MAKAEAMITAYAKAGFTKLHLDTSMGCAGEP----TALPDATTAARAARLAAVAEDAVGGRGGVLPVYIIGTEVPIPGGA 185 (450)
T ss_dssp HHHHHHHHHHHHTTTCCEEEECCCBCCSSSC----SBCCHHHHHHHHHHHHHHHHHTC------CCEEEEECC-------
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCchhhc----cchhHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeeeecCCCCcc
Confidence 7788888888888999999885433333321 34455667788999999999864433 2221 1110
Q ss_pred --CCCCcccCCHHHHHHHHH
Q psy13372 156 --SVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 156 --~~~~~~~~~~~~~~~li~ 173 (273)
...+...++++++.++++
T Consensus 186 ~~~~~~~~~T~PeeA~~fv~ 205 (450)
T 3txv_A 186 LEELDTLEVTAPEAAIETVR 205 (450)
T ss_dssp ------CCCCCHHHHHHHHH
T ss_pred ccccccCCCCCHHHHHHHHH
Confidence 001224789999999993
No 250
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=68.69 E-value=50 Score=27.56 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
.+.++.+.++|.+-|.=-... ...+++.+.++++|..++.++.. +.+ ......+...+.+++.++.|.+.|++
T Consensus 125 ~~V~~aAl~aGa~iINdvsg~--~~d~~m~~~aa~~g~~vVlmh~~--G~p---~y~d~v~ev~~~l~~~i~~a~~~GI~ 197 (297)
T 1tx2_A 125 AEVAKQAIEAGAHIINDIWGA--KAEPKIAEVAAHYDVPIILMHNR--DNM---NYRNLMADMIADLYDSIKIAKDAGVR 197 (297)
T ss_dssp HHHHHHHHHHTCCEEEETTTT--SSCTHHHHHHHHHTCCEEEECCC--SCC---CCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCEEEECCCC--CCCHHHHHHHHHhCCcEEEEeCC--CCC---CcchHHHHHHHHHHHHHHHHHHcCCC
Confidence 344555555566666221111 11246777889999998877652 111 12334556678999999999999999
Q ss_pred --eEEecCCC
Q psy13372 104 --AIHIMSGK 111 (273)
Q Consensus 104 --~i~~~~G~ 111 (273)
.|.+-||.
T Consensus 198 ~~~IilDPg~ 207 (297)
T 1tx2_A 198 DENIILDPGI 207 (297)
T ss_dssp GGGEEEECCT
T ss_pred hhcEEEeCCC
Confidence 78888764
No 251
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=68.67 E-value=4.6 Score=34.63 Aligned_cols=63 Identities=10% Similarity=0.077 Sum_probs=37.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+..++..+.+|++.|++.....+.+ ...+......-....+.+.++++.|++.|+++.++|+-
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i 119 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTV 119 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEe
Confidence 4677778889999998853222111 00000000000012457888899999999999998753
No 252
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=68.33 E-value=40 Score=26.19 Aligned_cols=71 Identities=8% Similarity=0.011 Sum_probs=45.6
Q ss_pred CHHHHHHHHHHcCCCeEEecC---CCC---CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF---PPV---GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~---~~~---~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
++.+.++.+.+.|.+.+++.. .+. ....+.++++.+..+..+..... . .+++ +.++
T Consensus 17 ~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~~~~~~v~l~-------v-~d~~----------~~i~ 78 (220)
T 2fli_A 17 NFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLM-------V-VDPE----------RYVE 78 (220)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEE-------S-SSGG----------GGHH
T ss_pred HHHHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhCCCCEEEEEe-------e-cCHH----------HHHH
Confidence 789999999999999988773 211 12256666655444555443221 1 1221 1357
Q ss_pred HHHHcCCCeEEecCC
Q psy13372 96 YACALNIPAIHIMSG 110 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G 110 (273)
.+..+|+..+++|.+
T Consensus 79 ~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 79 AFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHTCSEEEEEGG
T ss_pred HHHHcCCCEEEEccC
Confidence 788899999999865
No 253
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=68.18 E-value=64 Score=28.50 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 83 ESEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 83 ~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
.+.+...+..+++.++++|.+.|-++.... +...+ ..+....+-+..+++.+.++++|+++.+-+
T Consensus 75 ~~~~~~~~~~ale~~a~lG~~~VE~~~~~~~p~~~~----~~e~~~~l~~~~~~lk~~l~~~GL~~~~~t 140 (438)
T 1a0c_A 75 MDIAKARVEAAFEFFDKINAPYFCFHDRDIAPEGDT----LRETNKNLDTIVAMIKDYLKTSKTKVLWGT 140 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEHHHHSCCCSS----HHHHHHHHHHHHHHHHHHHTTCSCEEEEEE
T ss_pred HHHHHhhHHHHHHHHHHcCCCEEEeccccccccccc----hhhhhccHHHHHHHHHHHHHHhCCceEecc
Confidence 566667788999999999999998863221 11100 111122334445566777899999987743
No 254
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=68.00 E-value=9.1 Score=33.34 Aligned_cols=66 Identities=8% Similarity=-0.049 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCC--Cc-------chHH------HHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIA--SE-------DPYT------TLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~--~~-------~~~~------~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++...+.++.|++.||..|.+.......-.+ |.+ .. ..++ .-.+.++.|.+++++.|+.+.-||
T Consensus 43 le~A~~li~~Ak~aGAdavKfQ~~k~~tl~s-~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stp 121 (385)
T 1vli_A 43 LDQAFALIDAAAEAGADAVKFQMFQADRMYQ-KDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTV 121 (385)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCBCGGGGTS-CCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBC
T ss_pred HHHHHHHHHHHHHhCCCEEeeeeeccCcccC-cchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEcc
Confidence 5788899999999999999986543321000 110 00 0011 123568899999999999999888
Q ss_pred CC
Q psy13372 152 VN 153 (273)
Q Consensus 152 ~~ 153 (273)
+.
T Consensus 122 fD 123 (385)
T 1vli_A 122 CD 123 (385)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 255
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=67.98 E-value=13 Score=33.50 Aligned_cols=46 Identities=20% Similarity=0.037 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCC-----------CCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP-----------PVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~-----------~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
.+...|+.+|.+|.++|++..+ |+-...+++.++++++||++..+-
T Consensus 32 ~l~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKlq~vm 88 (535)
T 2xfr_A 32 ELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQAIM 88 (535)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEEEE
Confidence 5788899999999999988753 221235899999999999997543
No 256
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=67.52 E-value=10 Score=32.67 Aligned_cols=60 Identities=3% Similarity=-0.058 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+..++..+.+|++.|+++.+....... + ....-+...+.++++++.|+++|+.+.|..|.
T Consensus 64 ~~di~~i~~~G~n~vRipv~w~~~~~~-~--~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~ 123 (380)
T 1edg_A 64 KQMIDAIKQKGFNTVRIPVSWHPHVSG-S--DYKISDVWMNRVQEVVNYCIDNKMYVILNTHH 123 (380)
T ss_dssp HHHHHHHHHHTCCEEEECCCCGGGEET-T--TTEECHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHcCCCEEEecccHHhhcCC-C--CCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 455666678999999997643211000 0 11112355788999999999999999998764
No 257
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=67.27 E-value=54 Score=27.36 Aligned_cols=115 Identities=6% Similarity=-0.058 Sum_probs=62.1
Q ss_pred HHHHHHHHH--cCCCeEE-ecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHH-HH
Q psy13372 24 LDKYRVAAE--LGFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYA-CA 99 (273)
Q Consensus 24 ~~~l~~~~~--~G~~~vE-l~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a-~~ 99 (273)
.+.++.+-+ .|.+-|- ++....+...+++...++++|..++.++... .|. |...+...+..++..+.+ .+
T Consensus 94 ~~V~eaaL~~~~Ga~iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh~d~---~G~---p~t~~~~~~i~~r~~~~~~~~ 167 (300)
T 3k13_A 94 WEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVVMAFDE---KGQ---ADTAARKIEVCERAYRLLVDK 167 (300)
T ss_dssp HHHHHHHHHHCSSCCEEEEECSTTCHHHHHHHHHHHHHHTCEEEEESEET---TEE---CCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCEEEeCCcccCChhHHHHHHHHHHhCCeEEEEeeCC---CCC---CCCHHHHHHHHHHHHHHHHHH
Confidence 444555555 5655442 2211111123478899999999998877521 122 222334456777788886 88
Q ss_pred cCCC--eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEE
Q psy13372 100 LNIP--AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTAL 148 (273)
Q Consensus 100 lG~~--~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~ 148 (273)
.|.+ .|.+-||..+.... .+...+...+.|+.+-.+-+.+ |+.+.
T Consensus 168 ~Gi~~~~IilDPgig~~gk~----~~~~~~~~~~~l~~l~~lk~~lPg~pvl 215 (300)
T 3k13_A 168 VGFNPHDIIFDPNVLAVATG----IEEHNNYAVDFIEATGWIRKNLPGAHVS 215 (300)
T ss_dssp TCCCGGGEEEECCCCCCSSS----CGGGTTHHHHHHHHHHHHHHHSTTCEEC
T ss_pred cCCCHHHEEEeCCCCccCCC----hHHhhHHHHHHHHHHHHHHHhCCCCCEE
Confidence 9995 68887775322211 2332223444455544444455 65543
No 258
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=67.24 E-value=52 Score=27.16 Aligned_cols=121 Identities=12% Similarity=-0.045 Sum_probs=67.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg------~~~--------t~~ai~ 87 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIA-GTG------ANA--------TAEAIS 87 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------Ccc--------HHHHHH
Confidence 3667788888999999998875321 122 22223333332 44432 221 111 234445
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+ |++.++.+.+-|.+.. ...--+++...++.
T Consensus 88 la~~a~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~i---a~a~~lPiilYn~P~~---tg~~l~~~~~~~La 152 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTPYYNRP---------SQEGLYQHFKAI---AEHTDLPQILYNVPSR---TGCDLLPETVGRLA 152 (292)
T ss_dssp HHHHTTTSSCSEEEEECCCSSCC---------CHHHHHHHHHHH---HTTCSSCEEEECCHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHH---HHhcCCCEEEEeCcch---hccCCCHHHHHHHH
Confidence 67777889999876644332111 234566666655 4556789999886421 11233566666666
No 259
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=67.21 E-value=44 Score=30.65 Aligned_cols=145 Identities=11% Similarity=0.043 Sum_probs=80.2
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC-CeEEecCCCCCCCCCCCCCCcchHH
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI-PAIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~-~~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
++++-+..-++|-.|..-+++.....++. .-...+...+..++++++|++.-. +.|.--.|..+... +......++
T Consensus 46 V~~iH~~Yl~AGAdii~TnTf~a~~~~l~-~~g~~~~~~el~~~av~lAr~a~~~~~VAGsiGP~g~~~--~~~~~~~~~ 122 (566)
T 1q7z_A 46 VLKVHRSYIESGSDVILTNTFGATRMKLR-KHGLEDKLDPIVRNAVRIARRAAGEKLVFGDIGPTGELP--YPLGSTLFE 122 (566)
T ss_dssp HHHHHHHHHHHTCSEEECSCTTCSHHHHG-GGTCGGGHHHHHHHHHHHHHHHHTTSEEEEEECCCSCCB--TTTSSBCHH
T ss_pred HHHHHHHHHHhhcceeecCcccCCHHHHH-hcCchHHHHHHHHHHHHHHHHHHhCCeEEEeCCCcccCC--CCCCCCCHH
Confidence 34555556678999988777543111111 001112344566777777776532 22211112111110 111334577
Q ss_pred HHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCcccCCHHHHHHHHHHHhhc--CCCc-eeEeeecccccccCCChHHHH
Q psy13372 128 TLKENLIYACAELERHSLT-ALIEPVNQHSVPGYYLSSFRVAERLIRELRAH--GISN-VQLQFDFFNAQRICGDLTHTF 203 (273)
Q Consensus 128 ~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~--~~~~-~g~~~D~~h~~~~~~~~~~~i 203 (273)
.+.+..++-++...+.|+. +.+|+++ +..++..+++.+++. +-|- +.++++...-...|.++.+++
T Consensus 123 e~~~~~~~qi~~l~~~gvD~l~~ET~~----------~~~Ea~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~~~~ 192 (566)
T 1q7z_A 123 EFYENFRETVEIMVEEGVDGIIFETFS----------DILELKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPANFA 192 (566)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEEEC----------CHHHHHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEeccC----------CHHHHHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHHHHH
Confidence 8888888888877788986 8999853 456666666333553 4453 666664433334588888777
Q ss_pred Hhc
Q psy13372 204 GAC 206 (273)
Q Consensus 204 ~~~ 206 (273)
..+
T Consensus 193 ~~l 195 (566)
T 1q7z_A 193 ITF 195 (566)
T ss_dssp HHH
T ss_pred HHh
Confidence 766
No 260
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=67.11 E-value=17 Score=32.92 Aligned_cols=61 Identities=7% Similarity=-0.051 Sum_probs=41.5
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++.|+..+.+|.+.||++.+........+ ....-+...+.++++++.|+++||.+.|-.|.
T Consensus 48 ~~di~~i~~~G~N~vRipi~w~~~~~~~~--~~~~~~~~l~~~d~vv~~a~~~Gi~vildlH~ 108 (515)
T 3icg_A 48 HAMINKIKEAGFNTLRLPVTWDGHMGAAP--EYTIDQTWMKRVEEIANYAFDNDMYVIINLHH 108 (515)
T ss_dssp HHHHHHHHHHTCCEEEECCCCTTSBCCTT--TCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHCCCCEEEEccchHHhCCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEecCC
Confidence 45677778899999999765332110000 11122456789999999999999999887754
No 261
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=67.11 E-value=31 Score=29.76 Aligned_cols=96 Identities=8% Similarity=0.009 Sum_probs=58.1
Q ss_pred CCCCcccccccccccccccccCHHHHHHHHHHcCCCeEEecCCC--CCC---CHHHHHHHHHHcCCeeEEEecCCccccC
Q psy13372 1 MAAPSFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPP--VGV---TLEQLVAAQTRHGLKQVLINTEVDENFG 75 (273)
Q Consensus 1 ~~~~~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~--~~~---~~~~~~~~l~~~gL~i~~~~~~~~~~~~ 75 (273)
|.++|..|.......|..- .+.+.-+.++++|.+.+=+.... ... -.+++.+.+++.|+++..+..
T Consensus 1 m~~~~~~~~~p~~i~~G~g--~~~~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~------- 71 (387)
T 3bfj_A 1 MSYRMFDYLVPNVNFFGPN--AISVVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDG------- 71 (387)
T ss_dssp ---CCEEEECCSEEEESTT--GGGGHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECC-------
T ss_pred CCccceeeeCCCeEEECCC--HHHHHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECC-------
Confidence 6666666655454445442 45555667778887766555431 123 578999999999998754421
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCC
Q psy13372 76 YAAVKGKESEFRASLEKTIQYACALNIPAIHIMSG 110 (273)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G 110 (273)
..++|. .+.+.+.++.+.+.|+..|+-..|
T Consensus 72 ~~~~p~-----~~~v~~~~~~~~~~~~d~IIavGG 101 (387)
T 3bfj_A 72 VEPNPK-----DTNVRDGLAVFRREQCDIIVTVGG 101 (387)
T ss_dssp CCSSCB-----HHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ccCCCC-----HHHHHHHHHHHHhcCCCEEEEeCC
Confidence 112232 456778888888899988775444
No 262
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=67.07 E-value=21 Score=28.81 Aligned_cols=63 Identities=8% Similarity=0.003 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCCC-CCCCCCCCCcchHHHHH------HHHHHHHHHHhhCCcEEE
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKTE-SSRTQPIASEDPYTTLK------ENLIYACAELERHSLTAL 148 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~-~~~~~~~~~~~~~~~~~------~~l~~l~~~a~~~gv~i~ 148 (273)
..+..++.+.+.++.|+.-|++.|+++=.... .... ....+.... +.+..+.++|+++|+.+.
T Consensus 15 d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~----~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv 84 (262)
T 3ivz_A 15 EPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFE----TREEVFEIAQKIPEGETTTFLMDVARDTGVYIV 84 (262)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCS----CHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCC----CHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEE
Confidence 34566788899999999999999888521111 1100 111121111 467778888988887654
No 263
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=66.96 E-value=45 Score=32.25 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
.+.+++.+++++++|+..|+++.|.. .+. .++.++|.++|+.+..|..
T Consensus 351 ~~~~~~~l~~~k~~g~N~iR~wgg~~---------y~~---------~~~~d~cD~~GilV~~e~~ 398 (848)
T 2je8_A 351 TERYQTLFRDMKEANMNMVRIWGGGT---------YEN---------NLFYDLADENGILVWQDFM 398 (848)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSC---------CCC---------HHHHHHHHHHTCEEEEECS
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCcc---------CCC---------HHHHHHHHHcCCEEEECcc
Confidence 35677889999999999999975532 111 1467889999999988863
No 264
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=66.90 E-value=20 Score=30.74 Aligned_cols=62 Identities=5% Similarity=-0.062 Sum_probs=41.5
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.+..++..+.+|.+.|+++.+......+.+ ....-+...+.++++++.|.++||.+.|..+.
T Consensus 64 ~~~di~~i~~~G~N~vRipi~w~~~~~~~~--~~~~~~~~l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 64 TEDMFKVLIDNQFNVFRIPTTWSGHFGEAP--DYKIDEKWLKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCTTSBCCTT--TCCBCHHHHHHHHHHHHHHHTTTCEEEEECCS
T ss_pred cHHHHHHHHHcCCCEEEEeeEChhhcCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 345677778899999999764321100000 11122456788999999999999999998764
No 265
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=66.84 E-value=36 Score=27.86 Aligned_cols=51 Identities=8% Similarity=-0.098 Sum_probs=32.5
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..+....++.+++..|++=|.-..+-|+. ...++.|++..+..++.||.++
T Consensus 192 ~~~~I~~qL~~a~~~Ar~~G~AIaIGhp~----------------p~Ti~aL~~~~~~l~~~gi~LV 242 (261)
T 2qv5_A 192 TEASILRKLDDLERIARRNGQAIGVASAF----------------DESIAAISKWSREAGGRGIEIV 242 (261)
T ss_dssp SHHHHHHHHHHHHHHHHHHSEEEEEEECC----------------HHHHHHHHHHHHHGGGGTEEEC
T ss_pred CHHHHHHHHHHHHHHHHhcCcEEEEeCCC----------------HHHHHHHHHHhhhhhhCCeEEE
Confidence 34455667777778887777444443431 1356777777777777777765
No 266
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=66.71 E-value=17 Score=31.29 Aligned_cols=60 Identities=12% Similarity=0.040 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
..++..+.+|.+.|+++.+....-.+.+ .-..-+...+.+.++++.|.++||.+.|..|.
T Consensus 73 ~d~~~l~~~G~n~vRl~i~w~~~~~~~~--~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~ 132 (395)
T 2jep_A 73 ELIKKVKAAGFKSIRIPVSYLNNIGSAP--NYTINAAWLNRIQQVVDYAYNEGLYVIINIHG 132 (395)
T ss_dssp HHHHHHHHTTCCEEEECCCCGGGBCCTT--TCCBCHHHHHHHHHHHHHHHTTTCEEEECCCG
T ss_pred HHHHHHHHcCCCEEEEeeeeccccCCCC--CCccCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 4566677899999999765421100000 11112456788999999999999999998764
No 267
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=66.62 E-value=55 Score=27.16 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=54.3
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEEEcc--CCCCC-C-----CCcccCCHHHHHHHHHHHhhcCCCceeEeeeccccc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTALIEP--VNQHS-V-----PGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQ 193 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~--~~~~~-~-----~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~ 193 (273)
+...++.-++..++++++|+++||.+--|- ++... . .....++|+++.+++ ++.+-..+.+.+=+.|-.
T Consensus 106 S~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv---~~TgvD~LAvaiGt~HG~ 182 (286)
T 1gvf_A 106 SHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFV---ELTGVDSLAVAIGTAHGL 182 (286)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHH---HHHCCSEEEECSSCCSSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHH---HHHCCCEEEeecCccccC
Confidence 344578889999999999999999887775 22110 0 113569999999999 999888888888888876
Q ss_pred ccC
Q psy13372 194 RIC 196 (273)
Q Consensus 194 ~~~ 196 (273)
+.+
T Consensus 183 Y~~ 185 (286)
T 1gvf_A 183 YSK 185 (286)
T ss_dssp CSS
T ss_pred cCC
Confidence 653
No 268
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=66.33 E-value=9.6 Score=32.74 Aligned_cols=58 Identities=9% Similarity=-0.017 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
..++..+.+|.+.|+++.+...-. +. ....-+...+.++++++.|.++|+.+.|-.|.
T Consensus 56 ~di~~ik~~G~N~vRipi~w~~~~---~~-~g~~d~~~l~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 56 DMMTFLMQNGFNAVRIPVTWYEHM---DA-EGNVDEAWMMRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHTTEEEEEECCCCGGGB---CT-TCCBCHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHcCCCEEEEcccHHHhc---CC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEECCC
Confidence 466777889999999987543111 00 11122456788999999999999999888764
No 269
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=66.26 E-value=57 Score=27.26 Aligned_cols=79 Identities=13% Similarity=0.085 Sum_probs=53.7
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCC----HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGVT----LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
+.+.++.++.++-+.|.+....+... .+-...+.++.|+++..+-+-.+ . ....++..+..++
T Consensus 41 l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hltc~~----~---------~~~~l~~~L~~~~ 107 (304)
T 3fst_A 41 LWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCID----A---------TPDELRTIARDYW 107 (304)
T ss_dssp HHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEEESTT----S---------CHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEeecCC----C---------CHHHHHHHHHHHH
Confidence 55678889999999999886533122 23233445678999887543111 1 1356777888889
Q ss_pred HcCCCeEEecCCCCCC
Q psy13372 99 ALNIPAIHIMSGKTES 114 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~~ 114 (273)
.+|++.|.+..|..+.
T Consensus 108 ~~GI~nILaLrGDpp~ 123 (304)
T 3fst_A 108 NNGIRHIVALRGDLPP 123 (304)
T ss_dssp HTTCCEEEEECCCCC-
T ss_pred HCCCCEEEEecCCCCC
Confidence 9999999998887654
No 270
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=66.23 E-value=57 Score=27.26 Aligned_cols=128 Identities=7% Similarity=0.026 Sum_probs=72.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH---HHHH-HHHHHcC-CeeEEEecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL---EQLV-AAQTRHG-LKQVLINTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~---~~~~-~~l~~~g-L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
.+...+++..+.|.++|=+.+.-++ .+. .++. ..++..| +.+.. ++- ..+ .+...+.
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia-Gvg------~~~--------t~~ai~l 94 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV-GVS------APG--------FAAMRRL 94 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE-ECC------CSS--------HHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE-ecC------CCC--------HHHHHHH
Confidence 4677788888999999988764221 122 2233 3333432 33332 221 111 2345567
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
.+.|+++|+..+.+.+... .. ..+.++++++.+++.... ++.+.+-|.+.. ...--+++...++.
T Consensus 95 a~~A~~~Gadavlv~~P~~-~~---------s~~~l~~~f~~va~a~~~-~lPiilYn~P~~---tg~~l~~~~~~~La- 159 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPPS-LR---------TDEQITTYFRQATEAIGD-DVPWVLQDYPLT---LSVVMTPKVIRQIV- 159 (313)
T ss_dssp HHHHHHHTCSEEEECCCTT-CC---------SHHHHHHHHHHHHHHHCT-TSCEEEEECHHH---HCCCCCHHHHHHHH-
T ss_pred HHHHHHcCCCEEEECCCCC-CC---------CHHHHHHHHHHHHHhCCC-CCcEEEEeCccc---cCcCCCHHHHHHHH-
Confidence 7788899999987754332 11 245677777776665431 178888886431 12233567777777
Q ss_pred HHhhcCCCce
Q psy13372 174 ELRAHGISNV 183 (273)
Q Consensus 174 ~~~~~~~~~~ 183 (273)
+++ ||+
T Consensus 160 --~~~--pnI 165 (313)
T 3dz1_A 160 --MDS--ASC 165 (313)
T ss_dssp --HHC--SSE
T ss_pred --HhC--CCE
Confidence 665 674
No 271
>3nzp_A Arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; HET: PLP; 3.00A {Campylobacter jejuni subsp}
Probab=66.01 E-value=85 Score=29.13 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=52.4
Q ss_pred HHHHHHHHcCC--eeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC---CeEEecCCCCCCCCC--C-CCCC
Q psy13372 51 QLVAAQTRHGL--KQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI---PAIHIMSGKTESSRT--Q-PIAS 122 (273)
Q Consensus 51 ~~~~~l~~~gL--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~---~~i~~~~G~~~~~~~--~-~~~~ 122 (273)
++.+.+++.+. .+..+++..+.. . .+++....+++.+.+.++...++|. +.+.+..| .+.... . +.+.
T Consensus 213 ~ll~~l~~~~~L~~l~GLHfHiGSq--i-~d~~~~~~al~~~~~l~~~L~~~G~~~l~~LDiGGG-~gI~Y~~~~~~~s~ 288 (619)
T 3nzp_A 213 EAVNLLKENKLLEQFTMIHFHLGSQ--I-TEIHPLKKALNEAGNIYTELRKMGAKNLKAINLGGG-LAVEYSQFKNEKSR 288 (619)
T ss_dssp HHHHHHHHTTCTTTEEEEECCCCSC--B-CCSHHHHHHHHHHHHHHHHHHHTTCTTCCEEEEESC-BCCCCCCSSSCCSC
T ss_pred HHHHHHHhCCCCCceeEEEEEeCCC--C-CCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeCCC-cCCCCCCCcccccC
Confidence 33345566775 588887765421 1 3556666667777777777777776 45666543 332211 0 0011
Q ss_pred cchHHHHHHHHHHHH-HHHhhCC---cEEEEcc
Q psy13372 123 EDPYTTLKENLIYAC-AELERHS---LTALIEP 151 (273)
Q Consensus 123 ~~~~~~~~~~l~~l~-~~a~~~g---v~i~lE~ 151 (273)
.-.++.+++.+.+.. +.+.++| .+|.+||
T Consensus 289 ~~~l~eya~~I~~~l~~~~~~~~~~~p~Ii~EP 321 (619)
T 3nzp_A 289 NYTLREYANDVVFILKNIAEQKKDLEPDIFIES 321 (619)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHTTCCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 234556665554433 3333443 5788887
No 272
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=65.99 E-value=12 Score=31.46 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCeEEecCCCC-CCC-------HHHHHHHHHHcCCeeEEE
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPV-GVT-------LEQLVAAQTRHGLKQVLI 66 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~-~~~-------~~~~~~~l~~~gL~i~~~ 66 (273)
...+++.+++.|||||+|.+.+. ..+ ++++++.+++.++.++..
T Consensus 100 i~si~~~~~~~gfDGiDiDwE~p~~~d~~~~~~ll~eLr~~l~~~~~~Ls~a 151 (319)
T 3cz8_A 100 VNNIYDLVSTRGYGGVTIDFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIA 151 (319)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSCCGGGHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEeccCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence 35667888999999999997643 112 478888888888777643
No 273
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysin barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A*
Probab=65.88 E-value=65 Score=28.11 Aligned_cols=93 Identities=15% Similarity=0.073 Sum_probs=48.8
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchH
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPY 126 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~ 126 (273)
..++.+.+++.+|.+..+++..+ ...+++. ..+.+++.++.+..+|.+ .+.+. |+.+.... +.+..-.+
T Consensus 171 ~~~~~~~~~~~~l~l~Gl~~H~g----s~~~~~~---~~~~~~~~~~~~~~~G~~~~~ln~G-GG~~~~y~-~~~~~~d~ 241 (425)
T 1knw_A 171 LPAALDVIQRHHLQLVGIHMHIG----SGVDYAH---LEQVCGAMVRQVIEFGQDLQAISAG-GGLSVPYQ-QGEEAVDT 241 (425)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCC----CTTCHHH---HHHHHHHHHHHHHHHTCCCSEEECC-CCCCCCCS-TTCCCCCH
T ss_pred HHHHHHHHHHCCCCEEEEEEECC----CCCCHHH---HHHHHHHHHHHHHHhCCCCcEEEeC-CCcccCCC-CCCCCCCH
Confidence 44555566666999998887643 2223333 445666777788888765 44442 33422210 00011233
Q ss_pred HHHHHH----HHHHHHHHhhCCcEEEEcc
Q psy13372 127 TTLKEN----LIYACAELERHSLTALIEP 151 (273)
Q Consensus 127 ~~~~~~----l~~l~~~a~~~gv~i~lE~ 151 (273)
+.+.+. ...+.+... +|+.+.+||
T Consensus 242 ~~~~~~~~~~~~~i~~~~~-~~~~~~~Ep 269 (425)
T 1knw_A 242 EHYYGLWNAAREQIARHLG-HPVKLEIEP 269 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHT-SCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCEEEEcC
Confidence 444222 233333333 788999997
No 274
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=65.83 E-value=6.8 Score=33.30 Aligned_cols=102 Identities=13% Similarity=0.087 Sum_probs=56.0
Q ss_pred HHHHHHHHHHcCCCeEEecCCCC--CCCCC-CCCC-----CcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCC--C
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKT--ESSRT-QPIA-----SEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVP--G 159 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~--~~~~~-~~~~-----~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~--~ 159 (273)
+++.++..+.+|++.|+++.+.. ..... ...+ +...-....+.+.++++.|.++||.+.|..+.+.... .
T Consensus 46 ~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~~~~~ 125 (358)
T 1ece_A 46 YRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSA 125 (358)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCS
T ss_pred HHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 46778888899999999975421 00000 0000 0000012567899999999999999998887532100 0
Q ss_pred cc---cCCHHHHHHHHHHH-hhc-CCCceeEeeecccc
Q psy13372 160 YY---LSSFRVAERLIREL-RAH-GISNVQLQFDFFNA 192 (273)
Q Consensus 160 ~~---~~~~~~~~~li~~~-~~~-~~~~~g~~~D~~h~ 192 (273)
.+ -.+.+...++++.+ +.. ++|++ +.+++.|-
T Consensus 126 ~w~~~~~~~~~~~~~~~~ia~r~~~~p~v-~~~el~NE 162 (358)
T 1ece_A 126 LWYTSSVSEATWISDLQALAQRYKGNPTV-VGFDLHNE 162 (358)
T ss_dssp SSCCSSSCHHHHHHHHHHHHHHTTTCTTE-EEEECSSC
T ss_pred CCcCCCccHHHHHHHHHHHHHHhcCCCcE-EEEEcccC
Confidence 11 12355556666332 333 33543 34676553
No 275
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=65.78 E-value=56 Score=26.97 Aligned_cols=132 Identities=9% Similarity=-0.007 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|-+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg------~~~--------t~~ai~ 86 (292)
T 2vc6_A 22 ALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIA-GAG------SNS--------TAEAIA 86 (292)
T ss_dssp HHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecC------Ccc--------HHHHHH
Confidence 4677788888999999998864211 122 22223333332 44442 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++ +.++.+.+-|.+.. ...--+++...++.
T Consensus 87 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~ia~---a~~lPiilYn~P~~---tg~~l~~~~~~~La 151 (292)
T 2vc6_A 87 FVRHAQNAGADGVLIVSPYYNKP---------TQEGIYQHFKAIDA---ASTIPIIVYNIPGR---SAIEIHVETLARIF 151 (292)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC---------CHHHHHHHHHHHHH---HCSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCCC---------CHHHHHHHHHHHHH---hCCCCEEEEeCccc---cCcCCCHHHHHHHH
Confidence 77788899999876654332111 23566677766654 45788888886421 11233667777777
Q ss_pred HHHhhcCCCceeEeee
Q psy13372 173 RELRAHGISNVQLQFD 188 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D 188 (273)
++. ||+--.=|
T Consensus 152 ---~~~--pnIvgiK~ 162 (292)
T 2vc6_A 152 ---EDC--PNVKGVXD 162 (292)
T ss_dssp ---HHC--TTEEEEEE
T ss_pred ---hhC--CCEEEEec
Confidence 544 67443333
No 276
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=65.66 E-value=54 Score=30.01 Aligned_cols=113 Identities=11% Similarity=0.067 Sum_probs=71.0
Q ss_pred ccccccccCHHHHHHHHHHcCCCeEEecC---CCCC-CCH---HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHH
Q psy13372 14 LLFNDLAANYLDKYRVAAELGFRYIESWF---PPVG-VTL---EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEF 86 (273)
Q Consensus 14 ~~~~~~~~~~~~~l~~~~~~G~~~vEl~~---~~~~-~~~---~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
.++.+. .+.++++.+++.| ..+.+.+ +.+. +.. ..+.+.+++.|++-+.++.+.++.. ..|......
T Consensus 103 ~~~~n~--~l~~~~~~~~~~~-~~lHl~GL~SdGGVHSh~~Hl~~l~~~a~~~g~~~v~vH~f~DGRD---~~p~S~~~~ 176 (561)
T 3igz_B 103 EIYTGE--GYRYLHGAFSKEG-STLHLIGLLSDGGVHSRDNQIYSIIEHAVKDGAKRIRVHALYDGRD---VPDGSSFRF 176 (561)
T ss_dssp GGGTSH--HHHHHHHHHTSTT-CCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCEEEEEEEECSSS---SCTTTHHHH
T ss_pred CcccCH--HHHHHHHHHHhcC-CeEEEEEeccCCCccchHHHHHHHHHHHHHcCCCeEEEEEEccCCC---CCcchHHHH
Confidence 345554 6778888887755 3454443 3221 234 4566667889997666666544332 356667777
Q ss_pred HHHHHHHHHHHHHcCC-CeEEecCCCCC-CCCCCCCCC-cchHHHHHHHHHHHH
Q psy13372 87 RASLEKTIQYACALNI-PAIHIMSGKTE-SSRTQPIAS-EDPYTTLKENLIYAC 137 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~-~~i~~~~G~~~-~~~~~~~~~-~~~~~~~~~~l~~l~ 137 (273)
++.++..++...++|+ -.|...+|+.= ... . +..|+++...++.++
T Consensus 177 ~~~l~~~~~~~~~~g~~g~iasv~GRyyvaMD-----Ryd~rW~rv~~ay~a~v 225 (561)
T 3igz_B 177 TDELEAVLAKVRQNGCDAAIASGGGRMFVTMD-----RYDADWSIVERGWRAQV 225 (561)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEEEETTTSSCC-----CTTSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeccchhhcC-----ccCCCHHHHHHHHHHHh
Confidence 7777777788889998 46766677653 221 3 667888777776554
No 277
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=65.15 E-value=29 Score=27.96 Aligned_cols=184 Identities=10% Similarity=0.010 Sum_probs=95.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCC---C--C-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP---P--V-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~---~--~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
++.+.++.+.+.|.+.+++..- + . ......++++.+.... -++.. ..+| .+.++
T Consensus 27 ~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~G~~~v~~lr~~~~~---DvhLM-------v~~p----------~~~i~ 86 (237)
T 3cu2_A 27 QLNEEVTTLLENQINVLHFDIADGQFSSLFTVGAIGIKYFPTHCFK---DVHLM-------VRNQ----------LEVAK 86 (237)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCTHHHHTSCTTSEE---EEEEE-------CSCH----------HHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEEEecCccccchhhhHHHHHHHhhhCCC---CeEEE-------EECH----------HHHHH
Confidence 7899999999999998877731 1 0 1223333333222222 22221 1233 35788
Q ss_pred HHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC---------CcEEEEccCCCCCCCCcccCCHH
Q psy13372 96 YACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH---------SLTALIEPVNQHSVPGYYLSSFR 166 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~---------gv~i~lE~~~~~~~~~~~~~~~~ 166 (273)
.+...||..+++|.+.. . .+.++++..+++ |+.+++.-. |.+ ..+
T Consensus 87 ~~~~aGAd~itvH~ea~--~----------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~-----p~T---p~~ 140 (237)
T 3cu2_A 87 AVVANGANLVTLQLEQY--H----------------DFALTIEWLAKQKTTYANQVYPVLIGACLC-----PET---PIS 140 (237)
T ss_dssp HHHHTTCSEEEEETTCT--T----------------SHHHHHHHHTTCEEEETTEEEECEEEEEEC-----TTS---CGG
T ss_pred HHHHcCCCEEEEecCCc--c----------------cHHHHHHHHHhcccccccccCCceEEEEEe-----CCC---hHH
Confidence 88899999999996532 1 134556677778 877666641 111 122
Q ss_pred HHHHHHHHHhhcCCCceeE-eeeccccccc-CCChHHHHHhcCCcce----eEEeccCCCCCCCCCCCcccHHHHHHHHH
Q psy13372 167 VAERLIRELRAHGISNVQL-QFDFFNAQRI-CGDLTHTFGACRDLIG----HVQIAQAPDRQEPHARGEIDYAYVFELLA 240 (273)
Q Consensus 167 ~~~~li~~~~~~~~~~~g~-~~D~~h~~~~-~~~~~~~i~~~~~~i~----~vHi~d~~~~~~~g~~G~id~~~i~~~L~ 240 (273)
....++ +.+ +.+.+ +.+.+.-... .....+-++++...+. .+.+. -+ |-|+...+ ..+.
T Consensus 141 ~l~~~l---~~~--D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~--------vd-GGI~~~~~-~~~~ 205 (237)
T 3cu2_A 141 ELEPYL---DQI--DVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLIN--------ID-GSMTLELA-KYFK 205 (237)
T ss_dssp GGTTTT---TTC--SEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEE--------EE-SSCCHHHH-HHHH
T ss_pred HHHHHh---hcC--ceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEE--------EE-CCcCHHHH-HHHH
Confidence 223344 443 23333 3444332111 1112233333332221 11111 12 77886554 5567
Q ss_pred H--cCCCceEEEe-eecCCChHHHHHHHHHh
Q psy13372 241 R--EGYEGYVGLE-YKPQGNTKEGLEEFLKT 268 (273)
Q Consensus 241 ~--~gy~g~~~lE-~~~~~~~~~~~~~~~~~ 268 (273)
+ .|-++.++-= ++.. ++.+.++ .+++
T Consensus 206 ~~~aGad~~VvGSaIf~~-d~~~~~~-~l~~ 234 (237)
T 3cu2_A 206 QGTHQIDWLVSGSALFSG-ELKTNLK-VWKS 234 (237)
T ss_dssp HSSSCCCCEEECGGGGSS-CHHHHHH-HHHH
T ss_pred HhCCCCcEEEEeeHHhCC-CHHHHHH-HHHH
Confidence 7 8888766543 3344 7888888 5554
No 278
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=65.13 E-value=1.2e+02 Score=30.50 Aligned_cols=199 Identities=13% Similarity=0.088 Sum_probs=104.5
Q ss_pred CHHHHHHHHHH---c--CCCeEEecCC--------C-CCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHH
Q psy13372 22 NYLDKYRVAAE---L--GFRYIESWFP--------P-VGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEF 86 (273)
Q Consensus 22 ~~~~~l~~~~~---~--G~~~vEl~~~--------~-~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
+.++.+..+.. + ||..+|.|+- + .+.+.+.++.+.+.. +..+.++.- .....|..+.+.
T Consensus 553 ~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~~~l~R-~~n~vgy~~~pd----- 626 (1150)
T 3hbl_A 553 RTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLR-ASNAVGYKNYPD----- 626 (1150)
T ss_dssp CHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEEEEEEE-TTTBTCSSCCCH-----
T ss_pred CHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeEEEEec-cccccccccCCc-----
Confidence 55666665544 4 9999999842 2 122334444443322 344444431 111223333332
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc--EEEEccCCCCCCC-CcccC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL--TALIEPVNQHSVP-GYYLS 163 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv--~i~lE~~~~~~~~-~~~~~ 163 (273)
+..++.++.|...|+..+++....- .-... +.+.+.+++.|. ...+-.......+ .....
T Consensus 627 -~v~~~~v~~a~~~Gvd~irif~~~s---------d~~~~-------~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~ 689 (1150)
T 3hbl_A 627 -NVIHKFVQESAKAGIDVFRIFDSLN---------WVDQM-------KVANEAVQEAGKISEGTICYTGDILNPERSNIY 689 (1150)
T ss_dssp -HHHHHHHHHHHHTTCCEEEEECTTC---------CGGGG-------HHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSS
T ss_pred -hhHHHHHHHHHhCCcCEEEEEeeCC---------HHHHH-------HHHHHHHHHHhhheeEEEeecccccChhhcCCC
Confidence 2345678888889999998864321 11222 233344444552 2333332110001 12346
Q ss_pred CHHHHHHHHHHHhhcCCCceeEeeecccccccC--CChHHHHHhcCCcceeEEeccCCCC--------------------
Q psy13372 164 SFRVAERLIRELRAHGISNVQLQFDFFNAQRIC--GDLTHTFGACRDLIGHVQIAQAPDR-------------------- 221 (273)
Q Consensus 164 ~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~--~~~~~~i~~~~~~i~~vHi~d~~~~-------------------- 221 (273)
+.+-+.++++++.+.+...+.+ -|+.-..... ..+...+++..+-..++|.+|+.+.
T Consensus 690 ~~~~~~~~a~~~~~~Ga~~i~l-~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai 768 (1150)
T 3hbl_A 690 TLEYYVKLAKELEREGFHILAI-KDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAV 768 (1150)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE-EETTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBC
T ss_pred CHHHHHHHHHHHHHcCCCeeeE-cCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEec
Confidence 7888889997777776443333 2654332211 1223333333355678999987432
Q ss_pred CCC--CCCCcccHHHHHHHHHHcCCC
Q psy13372 222 QEP--HARGEIDYAYVFELLAREGYE 245 (273)
Q Consensus 222 ~~~--g~~G~id~~~i~~~L~~~gy~ 245 (273)
... +. |..+...++..|+..||+
T Consensus 769 ~GlG~~~-gn~~lE~lv~~L~~~g~~ 793 (1150)
T 3hbl_A 769 ASMSGLT-SQPSANSLYYALNGFPRH 793 (1150)
T ss_dssp GGGCSBT-SCCBHHHHHHHTTTSSCC
T ss_pred cccCCCC-CCccHHHHHHHHHhcCCC
Confidence 011 24 888999999999888776
No 279
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=65.12 E-value=23 Score=32.06 Aligned_cols=64 Identities=8% Similarity=-0.069 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHH---------HHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYT---------TLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~---------~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+.++..+.+.+++|.... +.....+ ..++..+ ...+-+++++++|++.||++..|-
T Consensus 167 ~~~ik~~id~ma~~KlN~lh~HltDdq~wr~e~~-~~P~Lt~~Ga~~~~~~YT~~di~eiv~yA~~rgI~VIPEI 240 (507)
T 1now_A 167 VKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSI-TFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVLPEF 240 (507)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCS-SCHHHHHHHSSSTTSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCcEEEEeeccCccceeecc-chhhhhcccCcCCCCCCCHHHHHHHHHHHHHcCCEEEEcc
Confidence 67899999999999999999997442 1110000 0112211 245779999999999999999995
No 280
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=64.22 E-value=67 Score=27.30 Aligned_cols=60 Identities=15% Similarity=0.071 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEEEccCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTALIEPVN 153 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~lE~~~ 153 (273)
++.+.++++.|.+.|...|.-.-...+.. .....+.+.+.++++++..+.+ .+.+ +|.++
T Consensus 86 l~~ld~~v~~a~~~GiyVIlDlH~~~g~~------~~~~~~~~~~~w~~iA~ryk~~~~~Vi-~el~N 146 (345)
T 3jug_A 86 IDTVREVIELAEQNKMVAVVEVHDATGRD------SRSDLDRAVDYWIEMKDALIGKEDTVI-INIAN 146 (345)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTTTCC------CHHHHHHHHHHHHHTHHHHTTCTTTEE-EECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCCCCC------cHHHHHHHHHHHHHHHHHHcCCCCeEE-EEecC
Confidence 45566666666666665543221111111 1223455566666666666555 3333 55443
No 281
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=64.18 E-value=6.3 Score=33.37 Aligned_cols=62 Identities=10% Similarity=-0.097 Sum_probs=39.5
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.++.++..+.+|.+.|+++.+......+.+ +...-+...+.|.++++.|+++|+.+.|..+.
T Consensus 38 ~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~--p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 38 KEEDFLWMAQWDFNFVRIPMCHLLWSDRGN--PFIIREDFFEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp CHHHHHHHHHTTCCEEEEEEEGGGTSCSSC--TTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CHHHHHHHHHcCCCEEEeeCCHHHhcCCCC--CCcCCHHHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 345677778899999999754221110000 00111235677889999999999998887653
No 282
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=64.11 E-value=69 Score=27.40 Aligned_cols=126 Identities=12% Similarity=-0.070 Sum_probs=73.7
Q ss_pred HHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHH
Q psy13372 51 QLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLK 130 (273)
Q Consensus 51 ~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~ 130 (273)
.++++.+++++.|.. +..-+....+ + ...+..++.....++.+-..|...+=+- | +...++.-+
T Consensus 78 ~v~~~A~~~~VPVaL-HlDHg~~~~l--d-~~~~~~l~~~~~~i~~~i~~GFtSVMiD-g-----------S~lp~eENi 141 (349)
T 3elf_A 78 FTHVIAAKYPVNVAL-HTDHCPKDKL--D-SYVRPLLAISAQRVSKGGNPLFQSHMWD-G-----------SAVPIDENL 141 (349)
T ss_dssp HHHHHHTTSSSCEEE-EECCCCGGGG--G-GTHHHHHHHHHHHHHTTCCCSCSEEEEC-C-----------TTSCHHHHH
T ss_pred HHHHHHHHCCCCEEE-ECCCCCCccc--c-hhhhhhHHHHHHHHHHHhhcCCCEEEec-C-----------CCCCHHHHH
Confidence 345566778877754 4321100000 0 1122334445555665555666666552 1 334577788
Q ss_pred HHHHHHHHHHhhCCcEEEEcc--CCCCCC------CCcccCCHHHHHHHHHHHhhcC-----CCceeEeeeccccccc
Q psy13372 131 ENLIYACAELERHSLTALIEP--VNQHSV------PGYYLSSFRVAERLIRELRAHG-----ISNVQLQFDFFNAQRI 195 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~--~~~~~~------~~~~~~~~~~~~~li~~~~~~~-----~~~~g~~~D~~h~~~~ 195 (273)
+.-++++++|++.||.+-.|- +..... .....++++++.+++ ++.+ -..+.+.+=+.|-.+.
T Consensus 142 ~~Tk~vv~~ah~~gvsVEaElG~iGG~Edgv~~~~~~~~yT~Peea~~Fv---~~tg~~~~gvD~LAvaiGt~HG~Yk 216 (349)
T 3elf_A 142 AIAQELLKAAAAAKIILEIEIGVVGGEEDGVANEINEKLYTSPEDFEKTI---EALGAGEHGKYLLAATFGNVHGVYK 216 (349)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESCCBC-------------CCCHHHHHHHH---HHHTTSTTSCEEEEECSSCBSSCCC
T ss_pred HHHHHHHHHHHHcCCeEEEEeeccccccCCcccccccccCCCHHHHHHHH---HHhCCCCCCceEEEEecCCcccCCC
Confidence 899999999999999888874 211100 123568999999999 8876 3456666666775553
No 283
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=64.10 E-value=28 Score=28.96 Aligned_cols=144 Identities=9% Similarity=0.022 Sum_probs=76.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCC-C-CCC---HHHHHHHHHHcCCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHH
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPP-V-GVT---LEQLVAAQTRHGLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTI 94 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~-~-~~~---~~~~~~~l~~~gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (273)
.++ +.+..+-++||+.|.+.... + +.. .+++.+...+.|+.+-. ++.-.+.+.+..... .+.....-..+.
T Consensus 85 ~~~-e~i~~ai~~GFtSVMiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~--~~~~~T~Peea~ 161 (286)
T 1gvf_A 85 ESL-DDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDA--ESAFLTDPQEAK 161 (286)
T ss_dssp CCH-HHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-------------CCSSCCHHHHH
T ss_pred CCH-HHHHHHHHcCCCeEEECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCccccc--ccccCCCHHHHH
Confidence 354 55666678999999999752 1 122 47888889999999874 443221111110000 000012233466
Q ss_pred HHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHH
Q psy13372 95 QYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRE 174 (273)
Q Consensus 95 ~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~ 174 (273)
++.++.|+..+-+-.|..=...... +.-.++ .|++ +.+..++.+.++--+ ..+.++..+.+
T Consensus 162 ~Fv~~TgvD~LAvaiGt~HG~Y~~~--p~Ld~~----~L~~---I~~~~~vpLVlHGgS--------G~~~e~i~~ai-- 222 (286)
T 1gvf_A 162 RFVELTGVDSLAVAIGTAHGLYSKT--PKIDFQ----RLAE---IREVVDVPLVLHGAS--------DVPDEFVRRTI-- 222 (286)
T ss_dssp HHHHHHCCSEEEECSSCCSSCCSSC--CCCCHH----HHHH---HHHHCCSCEEECCCT--------TCCHHHHHHHH--
T ss_pred HHHHHHCCCEEEeecCccccCcCCC--CccCHH----HHHH---HHHhcCCCEEEECCC--------CCCHHHHHHHH--
Confidence 6667789999988766541110000 222222 2333 333357999988421 33445555555
Q ss_pred HhhcCCCceeEeeecc
Q psy13372 175 LRAHGISNVQLQFDFF 190 (273)
Q Consensus 175 ~~~~~~~~~g~~~D~~ 190 (273)
+ . --.++++||-
T Consensus 223 -~-~--Gv~KiNi~Td 234 (286)
T 1gvf_A 223 -E-L--GVTKVNVATE 234 (286)
T ss_dssp -H-T--TEEEEEECHH
T ss_pred -H-C--CCeEEEEChH
Confidence 3 2 3478888873
No 284
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=64.06 E-value=46 Score=27.32 Aligned_cols=46 Identities=20% Similarity=0.296 Sum_probs=36.7
Q ss_pred CHHHHHHHHHHcCCCeEEec-CCCCCCCHHHHHHHHHHcCCeeEEEecC
Q psy13372 22 NYLDKYRVAAELGFRYIESW-FPPVGVTLEQLVAAQTRHGLKQVLINTE 69 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~-~~~~~~~~~~~~~~l~~~gL~i~~~~~~ 69 (273)
.++..++.+++.|+|+|=+. .|.+ ...++++.++++|+....+..+
T Consensus 113 g~~~f~~~~~~aGvdGvIipDlp~e--e~~~~~~~~~~~gl~~I~lvap 159 (271)
T 3nav_A 113 GIDDFYQRCQKAGVDSVLIADVPTN--ESQPFVAAAEKFGIQPIFIAPP 159 (271)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCGG--GCHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHHHHHHHCCCCEEEECCCCHH--HHHHHHHHHHHcCCeEEEEECC
Confidence 77999999999999997664 3433 4678999999999998766543
No 285
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=64.00 E-value=57 Score=26.47 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=37.5
Q ss_pred CHHHHHHHHHHcCCCeEEec-CCCCCCCHHHHHHHHHHcCCeeEEEecC
Q psy13372 22 NYLDKYRVAAELGFRYIESW-FPPVGVTLEQLVAAQTRHGLKQVLINTE 69 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~-~~~~~~~~~~~~~~l~~~gL~i~~~~~~ 69 (273)
.++..++.+++.|.+++=+. .|.+ ..+.+++.++++||....+..+
T Consensus 104 G~e~F~~~~~~aGvdG~IipDLP~e--E~~~~~~~~~~~Gl~~I~lvaP 150 (252)
T 3tha_A 104 GLEKFVKKAKSLGICALIVPELSFE--ESDDLIKECERYNIALITLVSV 150 (252)
T ss_dssp CHHHHHHHHHHTTEEEEECTTCCGG--GCHHHHHHHHHTTCEECEEEET
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCHH--HHHHHHHHHHHcCCeEEEEeCC
Confidence 67999999999999999776 3443 3688999999999998876543
No 286
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=63.79 E-value=8.4 Score=32.40 Aligned_cols=65 Identities=20% Similarity=0.232 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCC----CCC---CCCCCCCc--chH---HHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKT----ESS---RTQPIASE--DPY---TTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~----~~~---~~~~~~~~--~~~---~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+.+++.++.++++|++.|+++.... +.. .-++. +. ..+ +...+.|.++++.|+++||.+.++.+.
T Consensus 36 ~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~ 112 (344)
T 1qnr_A 36 ADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKL-SATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVN 112 (344)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEEC-CTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCB
T ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeec-CCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5677889999999999999963221 000 00000 00 001 234567889999999999999999764
No 287
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=63.64 E-value=39 Score=27.84 Aligned_cols=92 Identities=10% Similarity=-0.087 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCC-----CCCCCCCCCC
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKT-----ESSRTQPIAS 122 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-----~~~~~~~~~~ 122 (273)
+.+.+.+.+++.|+.-+.+..... .. ..+... .-+..++.-+.++..|.+...++++.. +... | .
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~-~~---~~~~~~--~~~~~~~~~~~l~~~Gl~i~~~~~~~~~~~~~~l~~--~--d 105 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLT-DP---WWPDIE--RDRRAIAYAKAFRKAGLTIESTFGGLASYTYNHFLA--P--T 105 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTS-CT---TSCHHH--HHHHHHHHHHHHHHTTCEEEEEECCHHHHTSCBTTC--S--S
T ss_pred HHHHHHHHHHHcCCCEEEeecccc-Cc---cccccc--hhhHHHHHHHHHHHcCCeEEEeeccccccccccCCC--C--C
Confidence 345666778999999988765321 10 012111 112456666777889998766554311 1111 1 3
Q ss_pred cchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 123 EDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 123 ~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
++..+..++.+++.++.|++.|.....
T Consensus 106 ~~~r~~~~~~~~~~i~~A~~lGa~~v~ 132 (316)
T 3qxb_A 106 LELQSLGYQHLKRAIDMTAAMEVPATG 132 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 556778899999999999999987553
No 288
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=63.55 E-value=15 Score=24.93 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
.+...-+.+++.||.--.+..|.. --+.+.++.++++-++..+.+ .+ .+..+++|++.+.||
T Consensus 14 tlrkfkdiikkngfkvrtvrspqe--lkdsieelvkkynativvvvv---------dd-------kewaekairfvkslg 75 (134)
T 2l69_A 14 TLRKFKDIIKKNGFKVRTVRSPQE--LKDSIEELVKKYNATIVVVVV---------DD-------KEWAEKAIRFVKSLG 75 (134)
T ss_dssp HHHHHHHHHHHTTCEEEEECSHHH--HHHHHHHHTTCCCCEEEEEEC---------SS-------HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCceEEEecCHHH--HHHHHHHHHHHhCCeEEEEEE---------cc-------HHHHHHHHHHHHhcC
Confidence 455556678889998777765531 235566777888888876543 12 246678999999999
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
+..+.+... .+ ..+|.+.....+..|..+-
T Consensus 76 aqvliiiyd---qd--------------qnrleefsrevrrrgfevr 105 (134)
T 2l69_A 76 AQVLIIIYD---QD--------------QNRLEEFSREVRRRGFEVR 105 (134)
T ss_dssp CCCEEEEEC---SC--------------HHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEEEe---Cc--------------hhHHHHHHHHHHhcCceEE
Confidence 999877531 11 1235555666667776544
No 289
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=63.35 E-value=62 Score=26.68 Aligned_cols=104 Identities=13% Similarity=0.126 Sum_probs=56.8
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeE
Q psy13372 26 KYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAI 105 (273)
Q Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i 105 (273)
.++.+...++|+|=+... . .+...+.+.+++.|+.++.++.............+. .+..+.+.+.....|.+.|
T Consensus 111 ~~~~l~~~~vdgiIi~~~-~-~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~----~~~~~~a~~~L~~~G~~~I 184 (338)
T 3dbi_A 111 AIQYLLDLRCDAIMIYPR-F-LSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDH----KQTSFNAVAELINAGHQEI 184 (338)
T ss_dssp HHHHHHHTTCSEEEECCS-S-SCHHHHHHHHHHCSSCEEEESSCCSSSGGGEECBCH----HHHHHHHHHHHHHTTCCSE
T ss_pred HHHHHHhCCCCEEEEeCC-C-CChHHHHHHHHcCCCCEEEEcCCCCCCCCCEEEECh----HHHHHHHHHHHHHCCCCEE
Confidence 455666667777755432 2 334667788888999888776432211000001111 2334445566666899999
Q ss_pred EecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 106 HIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 106 ~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
.+..|.... . ...+++.-..+..+++|+.+
T Consensus 185 ~~i~~~~~~--------~----~~~~R~~Gf~~al~~~g~~~ 214 (338)
T 3dbi_A 185 AFLTGSMDS--------P----TSIERLAGYKDALAQHGIAL 214 (338)
T ss_dssp EEECCCTTC--------H----HHHHHHHHHHHHHHHTTCCC
T ss_pred EEEeCCCCC--------c----cHHHHHHHHHHHHHHCCCCC
Confidence 887663211 1 22334444455566777654
No 290
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=63.28 E-value=67 Score=30.03 Aligned_cols=89 Identities=13% Similarity=0.084 Sum_probs=56.8
Q ss_pred cCHHHHHHHHHHcCCCeEEecCC----------CC---CCCHHHHHHHHHHcCCeeEEEecCC-ccc-------------
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFP----------PV---GVTLEQLVAAQTRHGLKQVLINTEV-DEN------------- 73 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~----------~~---~~~~~~~~~~l~~~gL~i~~~~~~~-~~~------------- 73 (273)
.-+.+.++.++++|+..|++-++ ++ ..+++++.++++++||.+..--.|. -.+
T Consensus 40 ~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~ 119 (654)
T 3thd_A 40 FYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEK 119 (654)
T ss_dssp GGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGS
T ss_pred HHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEeccCCccccccCCCcCChHHhcC
Confidence 36899999999999999999543 12 2358999999999999997532111 000
Q ss_pred cC---CCCCchhHHHHHHHHHHHHHHHHHc----CCCeEEecC
Q psy13372 74 FG---YAAVKGKESEFRASLEKTIQYACAL----NIPAIHIMS 109 (273)
Q Consensus 74 ~~---~~~~~~~~~~~~~~~~~~i~~a~~l----G~~~i~~~~ 109 (273)
.+ -+.++..++.....+.+.++..+.+ |.+.|-+..
T Consensus 120 p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~Qv 162 (654)
T 3thd_A 120 ESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQV 162 (654)
T ss_dssp TTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEC
T ss_pred CCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEe
Confidence 00 1234555666666666666665543 445555543
No 291
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=63.19 E-value=22 Score=32.13 Aligned_cols=64 Identities=8% Similarity=-0.049 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHH----------HHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYT----------TLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~----------~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+.++..+.+.+++|...- +.....+ ..+...+ ...+-+++++++|++.||++..|-
T Consensus 161 ~~~ik~~id~mA~~KlN~lh~HltDdq~wr~ei~-~~P~Lt~~Ga~~~~~~~YT~~di~eiv~yA~~rgI~VIPEI 235 (507)
T 2gjx_A 161 LSSILDTLDVMAYNKLNVFHWHLVDDPSFPYESF-TFPELMRKGSYNPVTHIYTAQDVKEVIEYARLRGIRVLAEF 235 (507)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCS-SCTHHHHHHSSCTTTSCBCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHhCCceEEEEEecccCeeeecc-ccchhhhccccCCCCCCcCHHHHHHHHHHHHHcCCEEEECC
Confidence 67899999999999999999987432 1110000 0111111 245679999999999999999995
No 292
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=63.13 E-value=20 Score=30.26 Aligned_cols=94 Identities=11% Similarity=0.087 Sum_probs=58.2
Q ss_pred HHHHHHHHcCCCeEEecCC---CCCCCCC---------CCCC------Ccch-HHH-HHHHHHHHHHHHhhCCc---EEE
Q psy13372 92 KTIQYACALNIPAIHIMSG---KTESSRT---------QPIA------SEDP-YTT-LKENLIYACAELERHSL---TAL 148 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G---~~~~~~~---------~~~~------~~~~-~~~-~~~~l~~l~~~a~~~gv---~i~ 148 (273)
..++.+++.|+..+..|.. .+....+ .+.. +++. .+. +.+.|.+..+.|.++|| +|.
T Consensus 120 ~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i~~a~~~GI~~~~Ii 199 (314)
T 2vef_A 120 KMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENIL 199 (314)
T ss_dssp THHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHcCCChhhEE
Confidence 5677788999999998752 1111000 0000 0000 222 45778899999999999 589
Q ss_pred EccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeeccc
Q psy13372 149 IEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFN 191 (273)
Q Consensus 149 lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h 191 (273)
|-|- -.|.-+.++-+++++.|+.+..+++-+++=+++
T Consensus 200 lDPG------iGF~kt~~~nl~ll~~l~~l~~~g~PvL~G~Sr 236 (314)
T 2vef_A 200 LDPG------IGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSR 236 (314)
T ss_dssp EECC------TTSSCCHHHHHHHHHTHHHHHTTSSCBEEECSS
T ss_pred EeCC------CCcccchHHHHHHHHHHHHhhcCCCCEEEEeCc
Confidence 8872 126778888899997776665455555554444
No 293
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=63.11 E-value=64 Score=26.71 Aligned_cols=132 Identities=12% Similarity=-0.050 Sum_probs=72.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 93 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIA-GTG------ANN--------TVEAIA 93 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CcC--------HHHHHH
Confidence 4667788888999999999875321 122 22233333333 44433 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... + .+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 94 la~~a~~~Gadavlv~~P~y~~~------~---~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 158 (297)
T 3flu_A 94 LSQAAEKAGADYTLSVVPYYNKP------S---QEGIYQHFKTIAEA---TSIPMIIYNVPGR---TVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC------C---HHHHHHHHHHHHHH---CCSCEEEEECHHH---HSSCCCHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCCCCCCC------C---HHHHHHHHHHHHHh---CCCCEEEEECCch---hccCCCHHHHHHHH
Confidence 77788999999886654332111 2 34566677666554 4788888886431 11223455544444
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+.||+--.=|.
T Consensus 159 ------~~pnivgiKds 169 (297)
T 3flu_A 159 ------EIPNIVGVKEA 169 (297)
T ss_dssp ------TSTTEEEEEEC
T ss_pred ------cCCCEEEEEeC
Confidence 24775444443
No 294
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=63.07 E-value=67 Score=26.91 Aligned_cols=159 Identities=14% Similarity=0.061 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+..+.++.+++.||----++...- ..++.+.++.++.+-.+..-..+ + . ..-...+.+...++.+.+.+
T Consensus 4 ~~~~ll~~A~~~~yAV~AfNv~n~-e~~~Ail~AAee~~sPvIlq~s~-g-~--------~~y~g~~~~~~~v~~~a~~~ 72 (305)
T 1rvg_A 4 TGLEILKKAREEGYGVGAFNVNNM-EFLQAVLEAAEEQRSPVILALSE-G-A--------MKYGGRALTLMAVELAKEAR 72 (305)
T ss_dssp CHHHHHHHHHHHTCCEEEEECCSH-HHHHHHHHHHHHTTCCEEEEEEH-H-H--------HHHHHHHHHHHHHHHHHHCS
T ss_pred CHHHHHHHHHHCCCEEEEEeeCCH-HHHHHHHHHHHHhCCCEEEECCh-h-H--------HhhCCHHHHHHHHHHHHhCC
Confidence 667888888888886545544322 34566666666666655431111 0 0 00011334445555555544
Q ss_pred CCeEEecC--CC-CC-------CCCC--CCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc--CCCCCC------CCcc
Q psy13372 102 IPAIHIMS--GK-TE-------SSRT--QPIASEDPYTTLKENLIYACAELERHSLTALIEP--VNQHSV------PGYY 161 (273)
Q Consensus 102 ~~~i~~~~--G~-~~-------~~~~--~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~--~~~~~~------~~~~ 161 (273)
++ |.+|. |. +. ...+ .-.-+...++.-++..++++++|+++||.+--|- +..... ....
T Consensus 73 VP-ValHlDHg~~~e~~~~ai~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~ 151 (305)
T 1rvg_A 73 VP-VAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDAL 151 (305)
T ss_dssp SC-EEEEEEEECSHHHHHHHHHTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTT
T ss_pred Cc-EEEECCCCCCHHHHHHHHHcCCCeeeeCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccc
Confidence 44 22221 11 10 0000 0001455688889999999999999999887775 222110 1235
Q ss_pred cCCHHHHHHHHHHHhhcCCCceeEeeeccccccc
Q psy13372 162 LSSFRVAERLIRELRAHGISNVQLQFDFFNAQRI 195 (273)
Q Consensus 162 ~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~ 195 (273)
.++|+++.+++ ++.+-..+.+.+=+.|-.+.
T Consensus 152 yT~Peea~~Fv---~~TgvD~LAvaiGt~HG~Yk 182 (305)
T 1rvg_A 152 LTNPEEARIFM---ERTGADYLAVAIGTSHGAYK 182 (305)
T ss_dssp CCCHHHHHHHH---HHHCCSEEEECSSCCSSSBC
T ss_pred cCCHHHHHHHH---HHHCCCEEEEecCccccccC
Confidence 69999999999 99888888999888887665
No 295
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=62.98 E-value=5.1 Score=35.60 Aligned_cols=81 Identities=11% Similarity=0.009 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc---EEEEccCCCCCCCCcccCCHHH
Q psy13372 91 EKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL---TALIEPVNQHSVPGYYLSSFRV 167 (273)
Q Consensus 91 ~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv---~i~lE~~~~~~~~~~~~~~~~~ 167 (273)
.+.++.+++.|+..|..|..+.+..-.... +++..+...+.|.+..+.|.++|| +|.+-|- -.|..+.++
T Consensus 305 ~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~-y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPG------iGF~Kt~~~ 377 (442)
T 3mcm_A 305 EQKAQLIAKYNKKYVIIHNLGITDRNQYLD-KENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIG------FGFGKKSDT 377 (442)
T ss_dssp HHHHHHHHHHTCEEEEECC-----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECC------CC-------
T ss_pred hHHHHHHHHhCCeEEEECCCCCCccccccC-cccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCC------CCCCCCHHH
Confidence 467889999999999888643322100001 334455678889999999999999 5999982 125667777
Q ss_pred HHHHHHHHhhc
Q psy13372 168 AERLIRELRAH 178 (273)
Q Consensus 168 ~~~li~~~~~~ 178 (273)
.+++++.|+.+
T Consensus 378 nl~lL~~l~~l 388 (442)
T 3mcm_A 378 ARYLLENIIEI 388 (442)
T ss_dssp -----CCHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777444443
No 296
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=62.54 E-value=67 Score=26.74 Aligned_cols=133 Identities=14% Similarity=0.040 Sum_probs=74.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia-Gvg------~~s--------t~~ai~ 98 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIV-GAG------TNS--------TEKTLK 98 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE-cCC------Ccc--------HHHHHH
Confidence 4667788888999999998864211 122 22233333333 44432 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+ |++.++.+.+-|.+.. ...--+++...++.
T Consensus 99 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~v---a~a~~lPiilYn~P~~---tg~~l~~~~~~~La 163 (306)
T 1o5k_A 99 LVKQAEKLGANGVLVVTPYYNKP---------TQEGLYQHYKYI---SERTDLGIVVYNVPGR---TGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCC---------CHHHHHHHHHHH---HTTCSSCEEEEECHHH---HSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCC---------CHHHHHHHHHHH---HHhCCCCEEEEeCccc---cCcCCCHHHHHHHH
Confidence 77788889999876644332111 235666666655 4556789999886421 11233667777777
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
++. ||+--.=|.
T Consensus 164 ---~~~--pnIvgiKds 175 (306)
T 1o5k_A 164 ---ADL--KNVVGIXEA 175 (306)
T ss_dssp ---HHC--TTEEEEEEC
T ss_pred ---HhC--CCEEEEeCC
Confidence 664 775444343
No 297
>3epo_A Thiamine biosynthesis protein THIC; alpha-beta barrel, SAM superfamily, biosynthetic protein; HET: MP5; 2.10A {Caulobacter crescentus} PDB: 3epm_A* 3epn_A*
Probab=62.43 E-value=35 Score=30.99 Aligned_cols=108 Identities=11% Similarity=0.040 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCHHHHH-HHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 25 DKYRVAAELGFRYIESWFPPVGVTLEQLV-AAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~-~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
+.+.++-++|.|.|.=-...+ ++.+++ .+++...+.|-++=.+.-... ......+-..+.+...++.-.+-|+.
T Consensus 234 eK~~~A~~~GADtvMDLSTGg--di~~~R~~Il~~spvPiGTVPIYqA~~k---~~g~~~~lt~e~~~d~ie~QAeqGVD 308 (612)
T 3epo_A 234 DKLVWATRWGADTVMDLSTGR--NIHNIRDWIIRNSSVPIGTVPIYQALEK---VNGVAEDLNWEVFRDTLIEQCEQGVD 308 (612)
T ss_dssp HHHHHHHHTTCSEEEECCCST--THHHHHHHHHTTCSSCEEECHHHHHHHH---TTTCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHcCCCEEEeccCCC--CHHHHHHHHHHcCCCCccCcchHHHHHH---hCCChhhCCHHHHHHHHHHHHHhCCC
Q ss_pred eEEecCCCC------------------------------CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 104 AIHIMSGKT------------------------------ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 104 ~i~~~~G~~------------------------------~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
++++|.|.. ..+ -+.+.+.++|+++++|+|++.|
T Consensus 309 fmTIHaGv~~~~v~~~~~R~tgIVSRGGSima~Wml~~~kEN------------plYe~FD~ileI~k~YDVtlSL 372 (612)
T 3epo_A 309 YFTIHAGVRLPFIPMTAKRVTGIVSRGGSIMAKWCLAHHKEN------------FLYERFDEICEIMRAYDVSFSL 372 (612)
T ss_dssp EEEECTTCCGGGGGGGTTSSSCCCCHHHHHHHHHHHHHTCCC------------HHHHTHHHHHHHHTTTTCEEEE
T ss_pred EEEEcccccHHHHHHhcCCcCCeecCcHHHHHHHHHHcCCcC------------hHHHHHHHHHHHHHHhCeEEec
No 298
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=61.96 E-value=18 Score=31.25 Aligned_cols=65 Identities=9% Similarity=-0.085 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CC--CCC-CCCCCc-------ch--------HHHHHHHHHHHHHHHhhCCcEE
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ES--SRT-QPIASE-------DP--------YTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~--~~~-~~~~~~-------~~--------~~~~~~~l~~l~~~a~~~gv~i 147 (273)
++.+++.|+.++..+.+.+.+|.... +. +.+ .|.... .. --...+-+++++++|++.||+|
T Consensus 32 ~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~~~~~~~~~g~YT~~di~eiv~YA~~rgI~V 111 (367)
T 1yht_A 32 PEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIEL 111 (367)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCCcCCCCCCCCCcCHHHHHHHHHHHHHcCCEE
Confidence 67899999999999999999986432 11 100 000000 00 0145577999999999999999
Q ss_pred EEcc
Q psy13372 148 LIEP 151 (273)
Q Consensus 148 ~lE~ 151 (273)
..|-
T Consensus 112 IPEI 115 (367)
T 1yht_A 112 IPEL 115 (367)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9995
No 299
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=61.76 E-value=69 Score=29.30 Aligned_cols=57 Identities=9% Similarity=0.039 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc--EEE
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL--TAL 148 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv--~i~ 148 (273)
++.+...+++|++-|++.|.+|.-..+.+. ++..-...++.|.+..+..++.|+ +|+
T Consensus 139 ~~Hl~~l~~~a~~~g~~~v~vH~f~DGRD~-----~p~S~~~~~~~l~~~~~~~~~~g~~g~ia 197 (561)
T 3igz_B 139 DNQIYSIIEHAVKDGAKRIRVHALYDGRDV-----PDGSSFRFTDELEAVLAKVRQNGCDAAIA 197 (561)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEECSSSS-----CTTTHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEccCCCC-----CcchHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 678999999999999998888763332221 223333444445444456777887 554
No 300
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=61.72 E-value=12 Score=35.65 Aligned_cols=63 Identities=10% Similarity=-0.058 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCC---CCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQP---IASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+.+.+.++.|+++|+.++++--|......+.. -+.....+++=..|+.+++++++.|++++|-
T Consensus 346 ~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~GmkfGLW 411 (729)
T 4fnq_A 346 EKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQFGLW 411 (729)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCEEEEE
Confidence 46777888999999999999777653211100 0011112233357899999999999986553
No 301
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=61.53 E-value=37 Score=30.98 Aligned_cols=81 Identities=11% Similarity=0.038 Sum_probs=57.7
Q ss_pred HHHHHHHHc-CCCeEEecCCCCCCC-CCCCCCCc-c---------------------------hHHHHHHHHHHHHHHHh
Q psy13372 92 KTIQYACAL-NIPAIHIMSGKTESS-RTQPIASE-D---------------------------PYTTLKENLIYACAELE 141 (273)
Q Consensus 92 ~~i~~a~~l-G~~~i~~~~G~~~~~-~~~~~~~~-~---------------------------~~~~~~~~l~~l~~~a~ 141 (273)
+.++.+++. |+.+|..|..+.+.. ...+. ++ . ..+.+.+.|.+..+.|.
T Consensus 346 ~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~-y~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vv~~v~~~l~~~i~~a~ 424 (545)
T 2bmb_A 346 NMFAVIAENPEICYILSHTRGDISTMNRLAH-YENFALGDSIQQEFVHNTDIQQLDDLKDKTVLIRNVGQEIGERYIKAI 424 (545)
T ss_dssp THHHHHHTCTTSEEEEECCCSCTTTGGGCCC-CSSCTTTTTEEEEEETTEEGGGSTTHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEECCCCCCCCcccccc-ccccccccccchhccccccccccccccccchHHHHHHHHHHHHHHHHH
Confidence 578888999 999999986433221 00010 12 1 45777888999999999
Q ss_pred hCCcE---EEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 142 RHSLT---ALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 142 ~~gv~---i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
++||. |.+-|- -.|..+.++-+++++.++.+.
T Consensus 425 ~~GI~~~~IilDPG------iGF~Kt~~~nl~lL~~l~~l~ 459 (545)
T 2bmb_A 425 DNGVKRWQILIDPG------LGFAKTWKQNLQIIRHIPILK 459 (545)
T ss_dssp HTTCCGGGEEEECC------TTSSCCHHHHHHHHHTHHHHT
T ss_pred HcCCCHHHEEEeCC------CCcccChHHHHHHHHHHHHHH
Confidence 99996 999983 226778999999997766663
No 302
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=61.38 E-value=31 Score=30.43 Aligned_cols=93 Identities=15% Similarity=0.092 Sum_probs=51.2
Q ss_pred HHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchH
Q psy13372 50 EQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRTQPIASEDPY 126 (273)
Q Consensus 50 ~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~ 126 (273)
.++.+.+++. +|++..+++..+.. ..+++.....++.+.+.++...+.|.+ .+.+. |+++...... ....+
T Consensus 204 ~~~~~~~~~~~~l~l~Glh~H~gs~---~~d~~~~~~a~~~~~~l~~~l~~~G~~l~~LdiG-GG~gi~y~~~--~~~~~ 277 (441)
T 3n2b_A 204 AQVYRLAHSLPNLDVHGIDCHIGSQ---LTALAPFIDATDRLLALIDSLKAEGIHIRHLDVG-GGLGVVYRDE--LPPQP 277 (441)
T ss_dssp HHHHHHHHHCTTEEEEEEECCTTCS---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECC-SCCCEEC-------CEE
T ss_pred HHHHHHHhcCCCeEEEEEEEeecCC---CCCHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEC-CCcccCCCCC--CCCCH
Confidence 3444445554 89988887754311 135666666777777777777777754 55554 3333211000 11124
Q ss_pred HHHHHHHHHHHHHHhh-CCcEEEEcc
Q psy13372 127 TTLKENLIYACAELER-HSLTALIEP 151 (273)
Q Consensus 127 ~~~~~~l~~l~~~a~~-~gv~i~lE~ 151 (273)
+.+++.+++.. ++ .+++|.+||
T Consensus 278 ~~~~~~i~~~l---~~~~~~~l~~EP 300 (441)
T 3n2b_A 278 SEYAKALLDRL---ERHRDLELIFEP 300 (441)
T ss_dssp CHHHHHHHHHH---TTTCCSEEEECC
T ss_pred HHHHHHHHHHH---HhccCCEEEEeC
Confidence 44555554433 33 589999998
No 303
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=61.32 E-value=14 Score=30.20 Aligned_cols=116 Identities=13% Similarity=0.029 Sum_probs=69.1
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
|..|..+||..|-+.....+. +.|+++.++|.+.|+.+.+|.+ +.+++.+.+
T Consensus 119 I~eAr~~GADaILLI~a~L~~----------------~~l~~l~~~A~~lGl~~LvEVh-----------~~~El~rAl- 170 (258)
T 4a29_A 119 IDDAYNLGADTVLLIVKILTE----------------RELESLLEYARSYGMEPLILIN-----------DENDLDIAL- 170 (258)
T ss_dssp HHHHHHHTCSEEEEEGGGSCH----------------HHHHHHHHHHHHTTCCCEEEES-----------SHHHHHHHH-
T ss_pred HHHHHHcCCCeeehHHhhcCH----------------HHHHHHHHHHHHHhHHHHHhcc-----------hHHHHHHHh-
Confidence 566788999998776544311 2488899999999999999964 466766666
Q ss_pred HHhhcCCCceeEeeecccccccCCChHHHHHhcCCcce--eEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEe
Q psy13372 174 ELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIG--HVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLE 251 (273)
Q Consensus 174 ~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~--~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE 251 (273)
+ .+.+-+|++= -+...-.-|+... .++.+.+. .+-++ +.|.-...++ ..+++.|+++.++=|
T Consensus 171 --~-~~a~iIGINN--RnL~tf~vdl~~t-~~L~~~ip~~~~~Vs---------ESGI~t~~dv-~~l~~~G~~a~LVGe 234 (258)
T 4a29_A 171 --R-IGARFIGIMS--RDFETGEINKENQ-RKLISMIPSNVVKVA---------KLGISERNEI-EELRKLGVNAFLISS 234 (258)
T ss_dssp --H-TTCSEEEECS--BCTTTCCBCHHHH-HHHHTTSCTTSEEEE---------EESSCCHHHH-HHHHHTTCCEEEECH
T ss_pred --c-CCCcEEEEeC--CCccccccCHHHH-HHHHhhCCCCCEEEE---------cCCCCCHHHH-HHHHHCCCCEEEECH
Confidence 4 5556577641 1111112233322 22222221 11122 2155455554 567889999999888
Q ss_pred ee
Q psy13372 252 YK 253 (273)
Q Consensus 252 ~~ 253 (273)
..
T Consensus 235 al 236 (258)
T 4a29_A 235 SL 236 (258)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 304
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=61.30 E-value=79 Score=27.14 Aligned_cols=123 Identities=8% Similarity=-0.059 Sum_probs=71.6
Q ss_pred HHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHH
Q psy13372 52 LVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKE 131 (273)
Q Consensus 52 ~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~ 131 (273)
++.+.+++++.|..+ .. -+.+..-+..+..++..++.+..+-..|...+=+- | +...++.-++
T Consensus 91 v~~~A~~~~VPVaLH-lD----Hg~~~~~~~i~~~i~a~~~~~~~~~~~GFtSVMiD-g-----------S~lp~eENI~ 153 (357)
T 3qm3_A 91 VHLLAKAYGVPVILH-TD----HAARKLLPWIDGLIEANAQYKKTHGQALFSSHMLD-L-----------SEESLEENLS 153 (357)
T ss_dssp HHHHHHHHTCEEEEE-EC----CCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEECC-C-----------TTSCHHHHHH
T ss_pred HHHHHHHCCCcEEEE-CC----CCCccchHHHHHHHHHhHHHHhhhcCCCCCEEEEe-C-----------CCCCHHHHHH
Confidence 456677888887644 32 11110011122333333334444555666666552 1 3345778888
Q ss_pred HHHHHHHHHhhCCcEEEEcc--CCCCC--------CCCcccCCHHHHHHHHHHHhhcCC----CceeEeeecccccc
Q psy13372 132 NLIYACAELERHSLTALIEP--VNQHS--------VPGYYLSSFRVAERLIRELRAHGI----SNVQLQFDFFNAQR 194 (273)
Q Consensus 132 ~l~~l~~~a~~~gv~i~lE~--~~~~~--------~~~~~~~~~~~~~~li~~~~~~~~----~~~g~~~D~~h~~~ 194 (273)
..++++++|+++||.+-.|- +.... ......++++++.+++ ++.+. ..+.+.+=+.|-.+
T Consensus 154 ~Tk~vv~~ah~~gvsVEaELG~igG~Edgv~~~~~~~~~~yT~Peea~~Fv---~~tg~~~gvD~LAvaiGt~HG~Y 227 (357)
T 3qm3_A 154 TCEVYLQKLDALGVALEIELGCTGGEEDGVDNTGIDNSKLYTQPEDVALAY---ERLGKISDKFSIAASFGNVHGVY 227 (357)
T ss_dssp HHHHHHHHHHHHTCEEEEECCCCCC-----CCSSTTCTTTSCCHHHHHHHH---HHHTTTCSCEEEECCSSCCCSSC
T ss_pred HHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccccCCHHHHHHHH---HHhCCCCcccEEEEecCCccCCc
Confidence 99999999999999888874 11100 0123568999999999 76532 24666666666554
No 305
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=61.26 E-value=11 Score=32.37 Aligned_cols=67 Identities=9% Similarity=0.043 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCC--CC-CCCCCC---c----chHH---HHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTES--SR-TQPIAS---E----DPYT---TLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~--~~-~~~~~~---~----~~~~---~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++...+.++.|++.||..+.+.+..... .. ..+... . +.++ .-.+.++.|.+++++.|+.+.-|++.
T Consensus 34 ~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~~d 113 (349)
T 2wqp_A 34 LKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTLFS 113 (349)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEeeCC
Confidence 5688899999999999999886433211 00 000000 0 1111 12466889999999999999999864
No 306
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=61.14 E-value=46 Score=26.98 Aligned_cols=124 Identities=9% Similarity=0.029 Sum_probs=69.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+.++.++.+++.|.+.|-+ .. +..+.++..++.+++.--..+++.... ..... ...++.+...+ ..
T Consensus 15 d~~~vl~~a~~~gV~~i~v-~~-~~~~~~~~~~la~~~~~v~~~~GiHP~----~~~~~---~~~l~~l~~~~---~~-- 80 (254)
T 3gg7_A 15 DPVAVARACEERQLTVLSV-TT-TPAAWRGTLALAAGRPHVWTALGFHPE----VVSER---AADLPWFDRYL---PE-- 80 (254)
T ss_dssp SHHHHHHHHHHTTCEEEEC-CS-SGGGHHHHHGGGTTCTTEEECBCCCGG----GTTTT---GGGTHHHHHHG---GG--
T ss_pred CHHHHHHHHHHCCCcEEEe-cC-CHHHHHHHHHHHHhCCCeEEEEeeCcc----ccccc---HHHHHHHHHHh---hh--
Confidence 7899999999999987655 22 224556666666676532233333211 11111 11233333333 21
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE-EccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL-IEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~-lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.+.+ |-.+-+.. . .....++...+.+++.+++|+++|..+. |+.- ...+++.+++ ++.
T Consensus 81 --~vaI--GEiGLD~~-~-~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r----------~a~~~~~~il---~~~ 139 (254)
T 3gg7_A 81 --TRFV--GEVGLDGS-P-SLRGTWTQQFAVFQHILRRCEDHGGRILSIHSR----------RAESEVLNCL---EAN 139 (254)
T ss_dssp --CSEE--EEEECCCC-G-GGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECT----------TCHHHHHHHH---HHC
T ss_pred --ccEE--EEEecCCC-c-ccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcC----------CcHHHHHHHH---HHc
Confidence 1222 22221110 0 0124566777889999999999999997 9973 1356778888 776
No 307
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=60.71 E-value=9.8 Score=34.06 Aligned_cols=59 Identities=3% Similarity=0.006 Sum_probs=39.5
Q ss_pred HHHH-HHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 91 EKTI-QYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 91 ~~~i-~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
++.+ +..+.+|.+.|++......-. |. ....-....+.+.++++.|+++||.+.|..+.
T Consensus 68 ~~di~~~l~~~G~N~VRl~v~w~~~~---p~-~g~~~~~~l~~l~~~v~~a~~~Gi~vildlH~ 127 (481)
T 2osx_A 68 EADLAREYADMGTNFVRFLISWRSVE---PA-PGVYDQQYLDRVEDRVGWYAERGYKVMLDMHQ 127 (481)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHC---SB-TTBCCHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHCCCCEEEEeCcHHHcC---CC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 3455 677789999999965321000 00 11122456778999999999999999988754
No 308
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=60.65 E-value=71 Score=27.44 Aligned_cols=131 Identities=12% Similarity=-0.033 Sum_probs=70.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcCCeeEEE-ecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHGLKQVLI-NTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~gL~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+=++..+ ++ |..+ .+...+.
T Consensus 81 al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGv------g~~s--------t~eai~l 146 (360)
T 4dpp_A 81 AYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNT------GSNS--------TREAIHA 146 (360)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEEC------CCSS--------HHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEec------CCCC--------HHHHHHH
Confidence 4677788888999999999875321 122 22333344443333322 22 1111 2344566
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
.+.|+++|+..+.+.+...... ..+.++++++.+++ + +.+.+-|.+.. ...--+++...++.
T Consensus 147 a~~A~~~Gadavlvv~PyY~k~---------sq~gl~~hf~~IA~---a--~PiilYNiP~r---Tg~~ls~e~l~~La- 208 (360)
T 4dpp_A 147 TEQGFAVGMHAALHINPYYGKT---------SIEGLIAHFQSVLH---M--GPTIIYNVPGR---TGQDIPPRAIFKLS- 208 (360)
T ss_dssp HHHHHHTTCSEEEEECCCSSCC---------CHHHHHHHHHTTGG---G--SCEEEEECHHH---HSCCCCHHHHHHHT-
T ss_pred HHHHHHcCCCEEEEcCCCCCCC---------CHHHHHHHHHHHHH---h--CCEEEEeCCcc---cCCCCCHHHHHHHh-
Confidence 7788889999876654333211 23566777777665 2 47778775421 11223455545554
Q ss_pred HHhhcCCCceeEeeec
Q psy13372 174 ELRAHGISNVQLQFDF 189 (273)
Q Consensus 174 ~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 209 --~---~pnIvGIKds 219 (360)
T 4dpp_A 209 --Q---NPNLAGVKEC 219 (360)
T ss_dssp --T---STTEEEEEEC
T ss_pred --c---CCCEEEEEeC
Confidence 3 3775444443
No 309
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.52 E-value=42 Score=27.72 Aligned_cols=120 Identities=9% Similarity=-0.028 Sum_probs=65.6
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
+...+++..+.|.++|-+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~-Gvg------~~~--------t~~ai~l 88 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIA-GTG------SNN--------TAASIAM 88 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSS--------HHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCC------ccc--------HHHHHHH
Confidence 567788888999999998864211 122 22233333332 44432 221 111 2345567
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
.+.|+++|+..+.+.+...... ..+.++++++.+ |++.++.+.+-|.+.. ...--+++...++.
T Consensus 89 a~~a~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~i---a~a~~lPiilYn~P~~---tg~~l~~~~~~~La 152 (291)
T 3a5f_A 89 SKWAESIGVDGLLVITPYYNKT---------TQKGLVKHFKAV---SDAVSTPIIIYNVPGR---TGLNITPGTLKELC 152 (291)
T ss_dssp HHHHHHTTCSEEEEECCCSSCC---------CHHHHHHHC-CT---GGGCCSCEEEEECHHH---HSCCCCHHHHHHHT
T ss_pred HHHHHhcCCCEEEEcCCCCCCC---------CHHHHHHHHHHH---HHhcCCCEEEEeCccc---cCCCCCHHHHHHHH
Confidence 7788899999876654332111 234556666554 5566889999886421 11223555555555
No 310
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=60.49 E-value=81 Score=27.02 Aligned_cols=202 Identities=14% Similarity=0.041 Sum_probs=100.6
Q ss_pred HHHHHHHHcCCCeE-EecCCCC-CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH---
Q psy13372 25 DKYRVAAELGFRYI-ESWFPPV-GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA--- 99 (273)
Q Consensus 25 ~~l~~~~~~G~~~v-El~~~~~-~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~--- 99 (273)
+.++.++++|...| ++.++.+ ..+.+.+.++.+++|+.+.+...... .. ..|......++.+...+..--.
T Consensus 79 ~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~-~~---~~P~~~~~~~~~L~~~~~~ei~~gi 154 (365)
T 3rhg_A 79 FELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYI-EK---FEGKRLADDIDAMAKMIDDELNIGI 154 (365)
T ss_dssp HHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCC-HH---HHGGGGGSCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccC-CC---CCchhhcCCHHHHHHHHHHHHHhcc
Confidence 34567788898755 4442421 26889999999999998764332211 00 0011000012333222211111
Q ss_pred --cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 100 --LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 100 --lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
-+++...+ |..+-++. ..+.-.+.|+.-+++|++. |+.|.++.-. ......+.++++ +
T Consensus 155 ~~t~vkag~I--GEiGld~~-------~t~~q~~~f~aq~~~A~~~~glPV~iH~~r-------~~~a~~e~l~iL---~ 215 (365)
T 3rhg_A 155 DGTDIRAGMI--GEIGVSPF-------FTDGEKNSLRAAALAQNNNPYASMNIHMPG-------WQRRGDEVLDIL---L 215 (365)
T ss_dssp TTSSCCCCEE--EEEECCTT-------CCHHHHHHHHHHHHHHTTCTTCEEEEECCT-------TSCCHHHHHHHH---T
T ss_pred ccCCceeEEE--EEEEcCCC-------CCHHHHHHHHHHHHHHHHhcCCcEEEECCC-------CCcCHHHHHHHH---H
Confidence 23333222 21111110 1234567788889999999 9999999511 124556777777 6
Q ss_pred hc-CCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCC--CCCCC---CCcccHHHHHHHHHHcCCCceEEE
Q psy13372 177 AH-GISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDR--QEPHA---RGEIDYAYVFELLAREGYEGYVGL 250 (273)
Q Consensus 177 ~~-~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~--~~~g~---~G~id~~~i~~~L~~~gy~g~~~l 250 (273)
+. +.|.-++. +.|..+..+++.. .+++.+.=.++-+.-. +. ..|.. ..+..-...++.+.+.||-..+++
T Consensus 216 e~~~~~~~~vv--i~H~~rs~~~~e~-a~~~l~~G~~I~~~g~-g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drill 291 (365)
T 3rhg_A 216 TEMGCDPAKIS--LAHSDPSGKDIDY-QCKMLDRGVWLEFDMI-GLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVL 291 (365)
T ss_dssp TTTCCCGGGEE--ESCCGGGTTCHHH-HHHHHHTTCEEEECCT-TCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred hccCCCCCceE--EecCCCCCCCHHH-HHHHHhCCCEEEecCC-CccccccccccccchHHHHHHHHHHHHhCCCCcEEE
Confidence 54 43321221 3577654345433 3333333334444421 11 01111 011223345666777888888999
Q ss_pred eee
Q psy13372 251 EYK 253 (273)
Q Consensus 251 E~~ 253 (273)
|..
T Consensus 292 eTD 294 (365)
T 3rhg_A 292 SHD 294 (365)
T ss_dssp CCC
T ss_pred eCC
Confidence 965
No 311
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=60.30 E-value=66 Score=25.96 Aligned_cols=88 Identities=17% Similarity=0.162 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCC----CCCCCCCCCCc
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKT----ESSRTQPIASE 123 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~----~~~~~~~~~~~ 123 (273)
+..+..+.+++.|+.-+.+.... +.+ ....+..+.++..|.+...++++.+ ......| .+
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~-------~~~-------~~~~~~~~~l~~~gl~~~~~~~~~p~~~~~~~l~~~--d~ 105 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRD-------PSI-------VDWNEVKILSEELNLPICAIGTGQAYLADGLSLTHP--ND 105 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSC-------GGG-------SCHHHHHHHHHHHTCCEEEEECTHHHHTTCCCTTCS--SH
T ss_pred CHHHHHHHHHHhCCCEEEEcCCC-------cch-------hhHHHHHHHHHHcCCeEEEEeccCccccCCCCCCCC--CH
Confidence 45677778889999988775431 011 1233455666778999877766210 1110000 33
Q ss_pred chHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 124 DPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 124 ~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
...+..++.+++.++.|++.|+.....+
T Consensus 106 ~~r~~~~~~~~~~i~~A~~lG~~~v~~~ 133 (290)
T 2zvr_A 106 EIRKKAIERVVKHTEVAGMFGALVIIGL 133 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCEEEESG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 4577889999999999999999977743
No 312
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=60.17 E-value=82 Score=27.01 Aligned_cols=128 Identities=12% Similarity=-0.019 Sum_probs=72.4
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTL 129 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~ 129 (273)
..++...+++++.|+.+ .. -+.+...+..+..++..++.+..+...|...+=+- | +...++.-
T Consensus 91 ~~v~~~A~~~~VPVaLH-lD----Hg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiD-g-----------S~~p~eEN 153 (358)
T 1dos_A 91 HHVHQMAEHYGVPVILH-TD----HCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMID-L-----------SEESLQEN 153 (358)
T ss_dssp HHHHHHHHHHTCEEEEE-EC----CCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEEC-C-----------TTSCHHHH
T ss_pred HHHHHHHHHCCCCEEEE-CC----CCCCccHHHHHHHHHHHHHHHHhcccCCCceEeec-C-----------CCCCHHHH
Confidence 44556677888877644 32 11110012233333333344444444556666542 1 33457788
Q ss_pred HHHHHHHHHHHhhCCcEEEEcc--CCCCC-C-------CCcccCCHHHHHHHHHHHhhcCC-CceeEeeecccccc
Q psy13372 130 KENLIYACAELERHSLTALIEP--VNQHS-V-------PGYYLSSFRVAERLIRELRAHGI-SNVQLQFDFFNAQR 194 (273)
Q Consensus 130 ~~~l~~l~~~a~~~gv~i~lE~--~~~~~-~-------~~~~~~~~~~~~~li~~~~~~~~-~~~g~~~D~~h~~~ 194 (273)
++.-++++++|++.||.+-.|- +.... . ...+.++++++.++++++-.++. ..+.+.+=+.|-.+
T Consensus 154 I~~Tkevv~~ah~~gvsVEaELG~vGG~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd~~d~LAvaiGt~HG~Y 229 (358)
T 1dos_A 154 IEICSKYLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFTIAASFGNVHGVY 229 (358)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCCCCCCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTCSCEEEECCSSCCCSSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEeccccCcCCCccccccccccccCCHHHHHHHHHHhcCCChhceEEEecccccCcc
Confidence 8899999999999999888885 22110 0 01246899999999922222331 14555555666555
No 313
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=60.08 E-value=49 Score=26.40 Aligned_cols=70 Identities=10% Similarity=-0.062 Sum_probs=43.0
Q ss_pred HHHHHHcCCCeEEecCCCC---CCC----HHHHHHHHHH---cCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 27 YRVAAELGFRYIESWFPPV---GVT----LEQLVAAQTR---HGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~---~~~----~~~~~~~l~~---~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
.+. -+.|.+.|++..+.+ ..+ .+++++..+. .+|++.. . .+.. . -+.+.+++++
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIl-E------t~~L-t-------~eei~~a~~i 136 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVIT-E------EPYL-R-------DEERYTLYDI 136 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEEC-C------GGGC-C-------HHHHHHHHHH
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEE-e------ccCC-C-------HHHHHHHHHH
Confidence 344 678999999998632 111 2344444443 3344331 1 1111 1 2468899999
Q ss_pred HHHcCCCeEEecCCCC
Q psy13372 97 ACALNIPAIHIMSGKT 112 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~ 112 (273)
|..+|+.+|.+-+|..
T Consensus 137 a~eaGADfVKTSTGf~ 152 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFA 152 (226)
T ss_dssp HHHHTCSEEECCCSCC
T ss_pred HHHcCCCEEEeCCCCC
Confidence 9999999999987765
No 314
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=59.96 E-value=21 Score=32.50 Aligned_cols=64 Identities=11% Similarity=0.055 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHH--------------HHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYT--------------TLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~--------------~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+.++..+.+.+++|.... ++....+ ..++..+ ...+-+++++++|++.||++..|-
T Consensus 198 ~~~ik~~id~mA~~KlN~lH~HltDdqgwriei~-~~P~Lt~~Ga~~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIPEI 276 (525)
T 3gh5_A 198 VDEVKRQIDLASQYKINKFHMHLSDDQGWRIEIK-SWPDLIEIGSKGQVGGGPGGYYTQEQFKDIVSYAAERYIEVIPEI 276 (525)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCT-TSTHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeccCCccccccc-cchhhhhccCccccCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEe
Confidence 68899999999999999999986432 1110000 0111111 245779999999999999999995
No 315
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=59.87 E-value=61 Score=27.58 Aligned_cols=80 Identities=11% Similarity=0.187 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHcCCCeEEecC--CC--------C---CCCHH---HHHHHHHH-cCCeeEEEecCCccccCCCCCchhHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF--PP--------V---GVTLE---QLVAAQTR-HGLKQVLINTEVDENFGYAAVKGKES 84 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~--~~--------~---~~~~~---~~~~~l~~-~gL~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
.+.++.+.+.+.|||+||++. |. + ..+.+ ++.+.+.+ .++.+..=.- . |.. +...
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR-~----g~~-~~~~-- 142 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMR-L----GLE-GKET-- 142 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEE-S----CBT-TCCC--
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEe-c----CcC-cccc--
Confidence 577788888899999999995 32 1 11222 22233333 4655543111 1 111 1111
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEecCCC
Q psy13372 85 EFRASLEKTIQYACALNIPAIHIMSGK 111 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~~i~~~~G~ 111 (273)
.+.....++.+...|+..|+++.+.
T Consensus 143 --~~~~~~~a~~l~~aG~d~I~V~~r~ 167 (350)
T 3b0p_A 143 --YRGLAQSVEAMAEAGVKVFVVHARS 167 (350)
T ss_dssp --HHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred --HHHHHHHHHHHHHcCCCEEEEecCc
Confidence 2345566777788999999998653
No 316
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=59.69 E-value=59 Score=26.19 Aligned_cols=107 Identities=7% Similarity=-0.010 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
...+.++.+...++|||=+..... .+ ...+.+.+.|+.++.+..... .... +-+..+..+..+.+.+.....|
T Consensus 53 ~~~~~~~~l~~~~vdGiIi~~~~~-~~--~~~~~l~~~~iPvV~~~~~~~-~~~~---~~V~~D~~~~~~~a~~~L~~~G 125 (294)
T 3qk7_A 53 KYQSLIHLVETRRVDALIVAHTQP-ED--FRLQYLQKQNFPFLALGRSHL-PKPY---AWFDFDNHAGASLAVKRLLELG 125 (294)
T ss_dssp CCHHHHHHHHHTCCSEEEECSCCS-SC--HHHHHHHHTTCCEEEESCCCC-SSCC---EEEEECHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHcCCCCEEEEeCCCC-Ch--HHHHHHHhCCCCEEEECCCCC-CCCC---CEEEcChHHHHHHHHHHHHHCC
Confidence 345566677777788777654322 22 445567788999988765321 1111 0011111234445556666689
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
.+.|.+..|.... ....++++-..+..+++|+.+
T Consensus 126 ~~~I~~i~~~~~~------------~~~~~R~~Gf~~al~~~g~~~ 159 (294)
T 3qk7_A 126 HQRIAFVSTDARI------------SYVDQRLQGYVQTMSEAGLMP 159 (294)
T ss_dssp CCCEEEEEESSCC------------HHHHHHHHHHHHHHHTTTCCC
T ss_pred CceEEEEeCCccc------------chHHHHHHHHHHHHHHCCCCC
Confidence 9998887654311 122334444555566677653
No 317
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=59.28 E-value=65 Score=25.52 Aligned_cols=154 Identities=15% Similarity=0.093 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcC-CeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHG-LKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~g-L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
+..+.++.+.+.|++.||+..... ...+.++++.++++ +.+- .++. + ++ ..++.|...
T Consensus 30 ~~~~~~~al~~gGv~~iel~~k~~-~~~~~i~~l~~~~~~l~vg-aGtv------l--~~-----------d~~~~A~~a 88 (224)
T 1vhc_A 30 DILPLADTLAKNGLSVAEITFRSE-AAADAIRLLRANRPDFLIA-AGTV------L--TA-----------EQVVLAKSS 88 (224)
T ss_dssp GHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTCEEE-EESC------C--SH-----------HHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeccCc-hHHHHHHHHHHhCcCcEEe-eCcE------e--eH-----------HHHHHHHHC
Confidence 567778888899999999996533 34566666777764 2222 2211 1 11 345677778
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCC
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGI 180 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 180 (273)
|+..++.+ .. . ..+.+.++++|+.+.+ + +.|+.++.+.. +.+.
T Consensus 89 GAd~v~~p--~~---------d-----------~~v~~~ar~~g~~~i~---------G--v~t~~e~~~A~----~~Ga 131 (224)
T 1vhc_A 89 GADFVVTP--GL---------N-----------PKIVKLCQDLNFPITP---------G--VNNPMAIEIAL----EMGI 131 (224)
T ss_dssp TCSEEECS--SC---------C-----------HHHHHHHHHTTCCEEC---------E--ECSHHHHHHHH----HTTC
T ss_pred CCCEEEEC--CC---------C-----------HHHHHHHHHhCCCEEe---------c--cCCHHHHHHHH----HCCC
Confidence 99999642 21 1 2345677778887653 2 44677776655 4666
Q ss_pred CceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceE
Q psy13372 181 SNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYV 248 (273)
Q Consensus 181 ~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~ 248 (273)
+.+++ +.....++ .+.++.+...+..+.+.= . |-|+...+-+.++.-|..+..
T Consensus 132 d~vk~----Fpa~~~gG--~~~lk~l~~~~~~ipvva--------i-GGI~~~N~~~~l~agga~~v~ 184 (224)
T 1vhc_A 132 SAVKF----FPAEASGG--VKMIKALLGPYAQLQIMP--------T-GGIGLHNIRDYLAIPNIVACG 184 (224)
T ss_dssp CEEEE----TTTTTTTH--HHHHHHHHTTTTTCEEEE--------B-SSCCTTTHHHHHTSTTBCCEE
T ss_pred CEEEE----eeCccccC--HHHHHHHHhhCCCCeEEE--------E-CCcCHHHHHHHHhcCCCEEEE
Confidence 78888 22211111 344555443332222221 2 556666655555543555544
No 318
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=59.19 E-value=73 Score=26.69 Aligned_cols=71 Identities=8% Similarity=-0.017 Sum_probs=53.6
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEEEcc--CCCCC------CCCcccCCHHHHHHHHHHHhhcCCCceeEeeeccccc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTALIEP--VNQHS------VPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQ 193 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~--~~~~~------~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~ 193 (273)
+...++.-++..++++++|+++||.+--|- +.... ......++|+++.+++ ++.+-..+.+.+=+.|-.
T Consensus 106 S~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv---~~TgvD~LAvaiGt~HG~ 182 (307)
T 3n9r_A 106 SHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFV---KESQVDYLAPAIGTSHGA 182 (307)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHH---HHHCCSEEEECSSCCSSS
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHH---HHHCCCEEEEecCCcccc
Confidence 445678889999999999999999888774 21110 0123578999999999 998878888888888866
Q ss_pred cc
Q psy13372 194 RI 195 (273)
Q Consensus 194 ~~ 195 (273)
+.
T Consensus 183 Yk 184 (307)
T 3n9r_A 183 FK 184 (307)
T ss_dssp BC
T ss_pred cC
Confidence 54
No 319
>1uoz_A Putative cellulase; hydrolase, glycoside hydrolase, family 6; HET: GLC SSG; 1.10A {Mycobacterium tuberculosis} SCOP: c.6.1.1 PDB: 1up3_A* 1up0_A* 1up2_A*
Probab=59.09 E-value=54 Score=27.58 Aligned_cols=154 Identities=8% Similarity=-0.048 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCC---CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESS---RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSS 164 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~ 164 (273)
..++..++.|.+-|..-|.|...-+..+ .+.. -+..++...+.+..+.....+..+.+.|||=.- +..-+.+
T Consensus 76 ~~v~~~l~~A~~~g~~pvlVvY~lP~RDC~a~ssg--G~~~~~~Yk~~Id~ia~~i~~~~~vvIlEPDsL---~nl~C~~ 150 (315)
T 1uoz_A 76 GTVARYTGAAQAAGAMPVLTLYGIPHRDCGSYASG--GFATGTDYRGWIDAVASGLGSSPATIIVEPDAL---AMADCLS 150 (315)
T ss_dssp HHHHHHHHHHHHTTCBCEEEECCCTTBGGGSTTCB--CCSSHHHHHHHHHHHHHHHTTCCEEEEECTTHH---HHGGGSC
T ss_pred HHHHHHHHHHHhcCCCcEEEEeCCCCCCchhhccC--CCCCHHHHHHHHHHHHHHhCCCceEEEECCccc---ccccCcc
Confidence 3456667777777765443332221110 0000 112344555666666666677789999998210 1111222
Q ss_pred HHH---HHHHHHH-HhhcC-CCceeEeeecccccccCC-ChHHHHHhcC-CcceeEEeccCCCCCCCCCCCcccHHHHHH
Q psy13372 165 FRV---AERLIRE-LRAHG-ISNVQLQFDFFNAQRICG-DLTHTFGACR-DLIGHVQIAQAPDRQEPHARGEIDYAYVFE 237 (273)
Q Consensus 165 ~~~---~~~li~~-~~~~~-~~~~g~~~D~~h~~~~~~-~~~~~i~~~~-~~i~~vHi~d~~~~~~~g~~G~id~~~i~~ 237 (273)
... ..+.++- ++.+. .|++.+.+|.+|..+-+- .+.+.++..+ .++.-+=+. +.+. . -.-|-..+.+
T Consensus 151 ~~~~~~y~~~l~yAv~~L~~~pnv~vYlDaGh~gWl~a~~~a~~l~~AG~~~vrGfatN-VSNy----~-~t~dE~~y~~ 224 (315)
T 1uoz_A 151 PDQRQERFDLVRYAVDTLTRDPAAAVYVDAGHSRWLSAEAMAARLNDVGVGRARGFSLN-VSNF----Y-TTDEEIGYGE 224 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEEEEECCCTTSSCHHHHHHHHHHTTGGGSSEEEEC-TTCC----C-CHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHhccCCCeEEEEeCCCccccCHHHHHHHHHhcCccceeEEEEe-cCCC----C-CcccHHHHHH
Confidence 211 1222211 35553 599999999999765442 1233333333 223222221 1011 1 2234444455
Q ss_pred HHHHcCCCceEEEee
Q psy13372 238 LLAREGYEGYVGLEY 252 (273)
Q Consensus 238 ~L~~~gy~g~~~lE~ 252 (273)
.|...+..-.+++.-
T Consensus 225 ~l~~~~~~~~fVIDT 239 (315)
T 1uoz_A 225 AISGLTNGSHYVIDT 239 (315)
T ss_dssp HHHHHTTTCEEEEEC
T ss_pred HHHhcCCCCCEEEEC
Confidence 555556555666664
No 320
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=59.09 E-value=66 Score=25.53 Aligned_cols=94 Identities=7% Similarity=-0.027 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHcCCCeEEecC------CCCCCCHHHHHHHHHHc--CCeeEEEecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF------PPVGVTLEQLVAAQTRH--GLKQVLINTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~------~~~~~~~~~~~~~l~~~--gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
.+.+.++.+.+.|.+.+.+.. |.-....+.++++.+.. .+.+..+-+. .+|+ +.
T Consensus 18 ~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~~~~~dvhLmv--------~~p~----------~~ 79 (228)
T 3ovp_A 18 NLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMV--------SKPE----------QW 79 (228)
T ss_dssp GHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCSSSCEEEEEEC--------SCGG----------GG
T ss_pred hHHHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCCCCcEEEEEEe--------CCHH----------HH
Confidence 789999999999999888752 21113455555544442 4555443321 2332 24
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+...|+..|++|. ... + .+.++++.++++|+++++--
T Consensus 80 i~~~~~aGad~itvH~---Ea~-------~--------~~~~~i~~i~~~G~k~gval 119 (228)
T 3ovp_A 80 VKPMAVAGANQYTFHL---EAT-------E--------NPGALIKDIRENGMKVGLAI 119 (228)
T ss_dssp HHHHHHHTCSEEEEEG---GGC-------S--------CHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCCEEEEcc---CCc-------h--------hHHHHHHHHHHcCCCEEEEE
Confidence 5666778999999984 111 1 14455666778898877754
No 321
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=58.82 E-value=71 Score=25.92 Aligned_cols=108 Identities=6% Similarity=-0.068 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCC--C-CC-----------CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP--P-VG-----------VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFR 87 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~--~-~~-----------~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~ 87 (273)
+.++.++.+.+.|.+..=+... . .. ...+.+.+..+++.=.+..++... . .+ .+.++
T Consensus 36 ~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~~p-----~-~~---~~~~~ 106 (307)
T 2f6k_A 36 TPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDDGKSLAQQYPDQLGYLASLP-----I-PY---ELDAV 106 (307)
T ss_dssp CHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHHHHHHHHHCTTTEEEEECCC-----T-TC---HHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHHHHHHHHhCccceeEEEeCC-----C-CC---HHHHH
Confidence 8899999999999998544321 0 10 112456666777765555443310 0 12 23344
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+.+++++ +..|+..|.+++...+.. ..+ +.+..+.+.|+++|+.+.+++-.
T Consensus 107 ~el~~~~---~~~g~~gi~~~~~~~~~~------~~~------~~~~~~~~~a~~~~lpv~iH~~~ 157 (307)
T 2f6k_A 107 KTVQQAL---DQDGALGVTVPTNSRGLY------FGS------PVLERVYQELDARQAIVALHPNE 157 (307)
T ss_dssp HHHHHHH---HTSCCSEEEEESEETTEE------TTC------GGGHHHHHHHHTTTCEEEEECCC
T ss_pred HHHHHHH---hccCCcEEEEeccCCCCC------CCc------HhHHHHHHHHHHcCCeEEECCCC
Confidence 5554443 357888887765322111 111 35777788999999999999743
No 322
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=58.81 E-value=9.2 Score=32.14 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=22.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeE
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQV 64 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~ 64 (273)
.+.++.+++.|+++||...+.. ....+.+.+.++++||-++
T Consensus 216 ~~~l~~l~~~GldgIEv~~~~~~~~~~~~~~~lA~~~gL~~t 257 (301)
T 3o0f_A 216 DEQLDAMIADGLDGLEVWHRGNPPEQRERLLTIAARHDLLVT 257 (301)
T ss_dssp HHHHHHHHHHTCCEEEEESTTSCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCceE
Confidence 3455556666666666665421 1234555566666666555
No 323
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=58.71 E-value=41 Score=24.73 Aligned_cols=60 Identities=10% Similarity=0.050 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+-...+...|.++|++.|+++|..- +.+ -..-+..++.|+++.+..+..|+.+.==|.++
T Consensus 59 ~av~eI~~~a~kv~~~~ivlYPyAHLSs~-------La~P~~A~~iL~~le~~L~~~g~eV~raPFGw 119 (143)
T 2hl0_A 59 KAIEEISKVAEQVKAENVFVYPFAHLSSE-------LAKPSVAMDILNRVYQGLKERGFNVGKAPFGY 119 (143)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECGGGCSS-------BCCHHHHHHHHHHHHHHHHHTTCEEEECCSSE
T ss_pred HHHHHHHHHHHhcCCCEEEEeccccccCc-------cCChHHHHHHHHHHHHHHHhCCCeEEEeCCcc
Confidence 4455677889999999999987543 222 22345777888899999999888766555443
No 324
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=58.55 E-value=4.9 Score=33.59 Aligned_cols=66 Identities=12% Similarity=0.086 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCC---CCCCCC-CCC-----------------CCcchHHHHHHHHHHHHHHHhhCCcE
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGK---TESSRT-QPI-----------------ASEDPYTTLKENLIYACAELERHSLT 146 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~---~~~~~~-~~~-----------------~~~~~~~~~~~~l~~l~~~a~~~gv~ 146 (273)
+.+++.++.++++|.+.|+++... ...... .+. .....-+...+.+.++++.|+++||.
T Consensus 37 ~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~ 116 (387)
T 4awe_A 37 PDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIK 116 (387)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCE
Confidence 457788999999999999996421 100000 000 00000001234577888999999999
Q ss_pred EEEccCC
Q psy13372 147 ALIEPVN 153 (273)
Q Consensus 147 i~lE~~~ 153 (273)
+.++.++
T Consensus 117 v~~~~~~ 123 (387)
T 4awe_A 117 LIVALTN 123 (387)
T ss_dssp EEEECCB
T ss_pred EEEeecc
Confidence 9998754
No 325
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=58.52 E-value=4.5 Score=35.52 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=18.0
Q ss_pred CHHHHHHHHHHcCCCeEEecC
Q psy13372 22 NYLDKYRVAAELGFRYIESWF 42 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~ 42 (273)
.+.++.+.++++|||+|||+.
T Consensus 173 ~F~~AA~rA~~AGFDgVEIH~ 193 (400)
T 4gbu_A 173 EYVQAAKNSIAAGADGVEIHS 193 (400)
T ss_dssp HHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhcCcCeeeecc
Confidence 467777788999999999995
No 326
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=58.21 E-value=79 Score=27.44 Aligned_cols=103 Identities=14% Similarity=0.081 Sum_probs=59.8
Q ss_pred HHHHHHHHcCCeeEEEecCCc-cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEE-ec--CCCCCC----CC-C-CCC
Q psy13372 51 QLVAAQTRHGLKQVLINTEVD-ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIH-IM--SGKTES----SR-T-QPI 120 (273)
Q Consensus 51 ~~~~~l~~~gL~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~-~~--~G~~~~----~~-~-~~~ 120 (273)
+-.+.+++.|+..+-+.+... ... ....|-.....++.+.++|+.|.+.|...|. +| +|.... .. . ...
T Consensus 77 ~d~~~i~~~G~N~VRipi~~~~~~~-~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~~~~~w 155 (408)
T 1h4p_A 77 QDFANIASQGFNLVRIPIGYWAFQI-LDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKF 155 (408)
T ss_dssp HHHHHHHHTTCCEEEEEEEGGGTCC-CTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCT
T ss_pred HHHHHHHHCCCCEEEccCCHHHccc-CCCCCCccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCCCCCCC
Confidence 344557789988876543211 000 0001101012578999999999999999763 34 333211 00 0 001
Q ss_pred CCcchHHHHHHHHHHHHHHHhhC---CcEEEEccCCC
Q psy13372 121 ASEDPYTTLKENLIYACAELERH---SLTALIEPVNQ 154 (273)
Q Consensus 121 ~~~~~~~~~~~~l~~l~~~a~~~---gv~i~lE~~~~ 154 (273)
..+...+.+++.++++++.-+.. ...+++|.++-
T Consensus 156 ~~~~~~~~~~~~w~~ia~ry~~~~y~~~Vi~~el~NE 192 (408)
T 1h4p_A 156 LEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINE 192 (408)
T ss_dssp TSHHHHHHHHHHHHHHHHHTTSHHHHTTEEEEESCSC
T ss_pred CCHHHHHHHHHHHHHHHHHHcccCCCCeEEEEEeccC
Confidence 13456778888888888887765 67788887663
No 327
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=57.92 E-value=52 Score=24.20 Aligned_cols=78 Identities=5% Similarity=-0.147 Sum_probs=52.6
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcc
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLI 210 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i 210 (273)
+-.+.+.+.|++.|+.+.+-- .+...++++-+ .+.....-|+.++.+-+.-..--+.|.++.+.--+
T Consensus 29 di~~~l~~~a~~~g~~~~~~Q----------SN~EgeLid~I---h~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~ 95 (143)
T 1gqo_A 29 DIETDLFQFAEALHIQLTFFQ----------SNHEGDLIDAI---HEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPV 95 (143)
T ss_dssp HHHHHHHHHHHHHTCEEEEEE----------CSCHHHHHHHH---HHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCE
T ss_pred HHHHHHHHHHHHcCCEEEEEe----------eCCHHHHHHHH---HHhhhcCcEEEEccchhccccHHHHHHHHhCCCCE
Confidence 344455677888888765432 33455666666 66654556999998765433345788899988888
Q ss_pred eeEEeccCCCC
Q psy13372 211 GHVQIAQAPDR 221 (273)
Q Consensus 211 ~~vHi~d~~~~ 221 (273)
.-||+++...|
T Consensus 96 VEVHiSNi~aR 106 (143)
T 1gqo_A 96 VEVHLSNLYAR 106 (143)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEecCcccc
Confidence 89999986433
No 328
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=57.86 E-value=13 Score=26.60 Aligned_cols=42 Identities=10% Similarity=0.051 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
....+++.|.++|++.+.+.+|.. . .++.+.|+++|+++. .|
T Consensus 70 ~v~~~v~e~~~~g~k~v~~~~G~~---------~-----------~e~~~~a~~~Girvv-~n 111 (122)
T 3ff4_A 70 NQLSEYNYILSLKPKRVIFNPGTE---------N-----------EELEEILSENGIEPV-IG 111 (122)
T ss_dssp HHGGGHHHHHHHCCSEEEECTTCC---------C-----------HHHHHHHHHTTCEEE-ES
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC---------h-----------HHHHHHHHHcCCeEE-CC
Confidence 455677778889999877666532 1 378899999999987 35
No 329
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=57.80 E-value=31 Score=24.94 Aligned_cols=96 Identities=9% Similarity=0.069 Sum_probs=59.9
Q ss_pred HHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEE
Q psy13372 27 YRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIH 106 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~ 106 (273)
-..++..||+.+.+-.. .+++++.+.+.+++-.+..++.... . ....+.+.++..++.|.+.+.
T Consensus 24 ~~~l~~~G~~Vi~lG~~---~p~e~~v~~a~~~~~d~v~lS~~~~------~-------~~~~~~~~i~~l~~~g~~~i~ 87 (137)
T 1ccw_A 24 DHAFTNAGFNVVNIGVL---SPQELFIKAAIETKADAILVSSLYG------Q-------GEIDCKGLRQKCDEAGLEGIL 87 (137)
T ss_dssp HHHHHHTTCEEEEEEEE---ECHHHHHHHHHHHTCSEEEEEECSS------T-------HHHHHTTHHHHHHHTTCTTCE
T ss_pred HHHHHHCCCEEEECCCC---CCHHHHHHHHHhcCCCEEEEEecCc------C-------cHHHHHHHHHHHHhcCCCCCE
Confidence 34678899999988542 5789999999999999988765321 1 134566667777777775444
Q ss_pred ecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 107 IMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 107 ~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+..|+.... +.+.+ .+..+.+++.|+.-.+.+
T Consensus 88 v~vGG~~~~------~~~~~-------~~~~~~~~~~G~d~~~~~ 119 (137)
T 1ccw_A 88 LYVGGNIVV------GKQHW-------PDVEKRFKDMGYDRVYAP 119 (137)
T ss_dssp EEEEESCSS------SSCCH-------HHHHHHHHHTTCSEECCT
T ss_pred EEEECCCcC------chHhh-------hhhHHHHHHCCCCEEECC
Confidence 444543211 11112 223356777888777665
No 330
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=57.49 E-value=86 Score=27.66 Aligned_cols=102 Identities=8% Similarity=-0.001 Sum_probs=62.1
Q ss_pred HHcCCCeEEecCCCC------CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCe
Q psy13372 31 AELGFRYIESWFPPV------GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPA 104 (273)
Q Consensus 31 ~~~G~~~vEl~~~~~------~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 104 (273)
.+.|..++.....+. .....++.+.++++|..+..+.-.. +. ...+.+.+.++++...|++.
T Consensus 177 ~~~Ga~g~~~~~~y~p~~~~~~~el~~~~~~a~~~g~~v~~H~~~~----~~--------~~~~a~~e~i~la~~~g~~v 244 (480)
T 3gip_A 177 LEAGAVGFSTGLAYQPGAVAQAAELEGLARVAAERRRLHTSHIRNE----AD--------GVEAAVEEVLAIGRGTGCAT 244 (480)
T ss_dssp HHHTCCEEEEETTSTTGGGCCHHHHHHHHHHHHHTTCEEEEECSCS----ST--------THHHHHHHHHHHHHHHCCEE
T ss_pred HHCCCcEEeecCccCCcccCCHHHHHHHHHHHHHcCCEEEEEecCc----cc--------cHHHHHHHHHHHHHHhCCCE
Confidence 378988887764331 1223455577888998877654211 01 12567788899999999887
Q ss_pred EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 105 IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 105 i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
...|..... ...|....+.+ ++.+.|++.|+.+..|..++
T Consensus 245 ~i~H~s~~~---------~~~~~~~~~~l-~~i~~a~~~G~~Vt~e~~p~ 284 (480)
T 3gip_A 245 VVSHHKCMM---------PQNWGRSRATL-ANIDRAREQGVEVALDIYPY 284 (480)
T ss_dssp EETTCCCCS---------GGGTTTHHHHH-HHHHHHHHTTCCEEEEECSC
T ss_pred EEEEEeccC---------ccchhhHHHHH-HHHHHHHHcCCceEEEeecc
Confidence 776654321 12232223333 34556788899888887543
No 331
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=57.46 E-value=82 Score=26.11 Aligned_cols=132 Identities=9% Similarity=-0.063 Sum_probs=72.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++. ..+ .+...+
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~~--------t~~ai~ 90 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVA-GVA------STS--------VADAVA 90 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE-EEE------ESS--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCC------CCC--------HHHHHH
Confidence 4677788888999999987764211 122 22333334333 44443 210 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.+++. .++.+.+-|.+.. ...--+++...++.
T Consensus 91 la~~a~~~Gadavlv~~P~y~~~---------~~~~l~~~f~~va~a---~~lPiilYn~P~~---tg~~l~~~~~~~La 155 (300)
T 3eb2_A 91 QAKLYEKLGADGILAILEAYFPL---------KDAQIESYFRAIADA---VEIPVVIYTNPQF---QRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHHTCSEEEEEECCSSCC---------CHHHHHHHHHHHHHH---CSSCEEEEECTTT---CSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCCC---------CHHHHHHHHHHHHHH---CCCCEEEEECccc---cCCCCCHHHHHHHH
Confidence 77788899999876644332111 234566666665554 4689999997542 12233455555554
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 156 ---~---~pnIvgiKds 166 (300)
T 3eb2_A 156 ---E---HPRIRYIKDA 166 (300)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEEcC
Confidence 3 4786555454
No 332
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=57.34 E-value=83 Score=26.16 Aligned_cols=112 Identities=19% Similarity=0.140 Sum_probs=65.0
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccC-C---CCCchhHHHHHHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFG-Y---AAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
.+.++.+-+.|.+-|-=- ... ..+++...++++|..++.++...+ ... . .......++..+.+++.++.|.+
T Consensus 113 ~~Va~aAl~aGa~iINdV--sg~-~d~~m~~v~a~~~~~vVlmh~~eG-~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~ 188 (294)
T 2dqw_A 113 PEVAEEALKLGAHLLNDV--TGL-RDERMVALAARHGVAAVVMHMPVP-DPATMMAHARYRDVVAEVKAFLEAQARRALS 188 (294)
T ss_dssp HHHHHHHHHHTCSEEECS--SCS-CCHHHHHHHHHHTCEEEEECCSSS-CTTTGGGGCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEC--CCC-CChHHHHHHHHhCCCEEEEcCCCC-CCccccccCccccHHHHHHHHHHHHHHHHHH
Confidence 344555555566644211 111 335778889999999998775311 110 0 01123445668899999999999
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
.|.+.|.+-||.- .. ...++..+.|+.+-.+ ++.|..+.+
T Consensus 189 ~Gi~~IilDPG~G-f~--------kt~~~n~~ll~~l~~~-~~~g~Pvl~ 228 (294)
T 2dqw_A 189 AGVPQVVLDPGFG-FG--------KLLEHNLALLRRLDEI-VALGHPVLV 228 (294)
T ss_dssp TTCSCEEEECCTT-SS--------CCHHHHHHHHHTHHHH-HTTSSCBEE
T ss_pred CCCCcEEEcCCCC-cc--------cCHHHHHHHHHHHHHH-hcCCCCEEE
Confidence 9999988887642 21 1233445555555333 335655443
No 333
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=57.20 E-value=77 Score=26.38 Aligned_cols=70 Identities=7% Similarity=0.111 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHcCCCeEE-ecC--CCC-CCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 85 EFRASLEKTIQYACALNIPAIH-IMS--GKT-ESS-RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~~i~-~~~--G~~-~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
..++.+.++++.|.+.|...|. +|. |.. ... ...-...+...+.+.+.++++++..+.+.-.+++|.++-
T Consensus 66 ~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NE 140 (343)
T 1ceo_A 66 DGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQDFKTSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQ 140 (343)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCC--------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEecCCCccccCCCCcccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccC
Confidence 4578899999999999999764 332 221 000 000011334577788888888887777554578887663
No 334
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=56.93 E-value=84 Score=26.11 Aligned_cols=77 Identities=14% Similarity=0.053 Sum_probs=51.2
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHH---HHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFR---VAE 169 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~---~~~ 169 (273)
.++.|.++|+..|.++.. .+. .......+.+.++.+.++++|+.+.+|+.. ...+..+++ .+.
T Consensus 130 ~ve~Av~~GAdaV~~~i~-~Gs---------~~~~~~l~~i~~v~~~a~~~GlpvIie~~~----G~~~~~d~e~i~~aa 195 (295)
T 3glc_A 130 SMDDAVRLNSCAVAAQVY-IGS---------EYEHQSIKNIIQLVDAGMKVGMPTMAVTGV----GKDMVRDQRYFSLAT 195 (295)
T ss_dssp CHHHHHHTTCSEEEEEEC-TTS---------TTHHHHHHHHHHHHHHHHTTTCCEEEEECC--------CCSHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEE-CCC---------CcHHHHHHHHHHHHHHHHHcCCEEEEECCC----CCccCCCHHHHHHHH
Confidence 455666899999877532 111 135567788999999999999999999732 112234433 345
Q ss_pred HHHHHHhhcCCCceeEe
Q psy13372 170 RLIRELRAHGISNVQLQ 186 (273)
Q Consensus 170 ~li~~~~~~~~~~~g~~ 186 (273)
++. .+.+...++..
T Consensus 196 riA---~elGAD~VKt~ 209 (295)
T 3glc_A 196 RIA---AEMGAQIIKTY 209 (295)
T ss_dssp HHH---HHTTCSEEEEE
T ss_pred HHH---HHhCCCEEEeC
Confidence 666 78887888887
No 335
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=56.93 E-value=17 Score=31.56 Aligned_cols=54 Identities=7% Similarity=0.032 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+..++.|+.|+++|.+.|.+..-. +++..+...+.+++++++|++.|+.+.+--
T Consensus 41 ~~~~~Yi~~a~~~Gf~~IFTSL~~----------~e~~~~~~~~~~~~l~~~a~~~g~~vi~DV 94 (385)
T 1x7f_A 41 EKDMAYISAAARHGFSRIFTCLLS----------VNRPKEEIVAEFKEIINHAKDNNMEVILDV 94 (385)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECC----------C--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEccCCc----------cCCChHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 345588999999999998664321 233445678889999999999999988775
No 336
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=56.87 E-value=21 Score=30.90 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
..+..|+.|+.+|.+.|.+..-. +++..+...+.+++++++|++.|+.+.+--
T Consensus 18 ~~~~yi~~a~~~Gf~~IFTSL~~----------~e~~~~~~~~~~~~l~~~a~~~g~~vi~DI 70 (372)
T 2p0o_A 18 DTIIYIKKMKALGFDGIFTSLHI----------PEDDTSLYRQRLTDLGAIAKAEKMKIMVDI 70 (372)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECC----------C-----CHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHCCCCEEEccCCc----------cCCChHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 44578999999999998664321 233344677889999999999999888764
No 337
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=56.81 E-value=57 Score=26.83 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 85 EFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
..++.+.++++.|.+.|...+.-.........+ .+...+.+.+.++++++.-+.+.-.+++|.++-
T Consensus 71 ~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~~----~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NE 136 (317)
T 3aof_A 71 RFFKRVDEVINGALKRGLAVVINIHHYEELMND----PEEHKERFLALWKQIADRYKDYPETLFFEILNA 136 (317)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEECCCCHHHHHC----HHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSS
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEecCCccccCC----cHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccC
Confidence 457889999999999999987543222111001 334567788888888888877764467887653
No 338
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=56.58 E-value=88 Score=26.20 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecC-CCCCCCCCCCCCCcch
Q psy13372 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMS-GKTESSRTQPIASEDP 125 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~-G~~~~~~~~~~~~~~~ 125 (273)
....++.+..++.|.-|.++++.. ++.++.+++.|++++++.|.-.+ |..... . .
T Consensus 13 n~~~~ll~~A~~~~yAV~AfNv~n----------------~e~~~Avl~AAee~~sPvIlq~s~g~~~y~------g-~- 68 (306)
T 3pm6_A 13 NRALPLLTFARTHSFAIPAICVYN----------------LEGILAIIRAAEHKRSPAMILLFPWAIQYA------D-S- 68 (306)
T ss_dssp CSSHHHHHHHHHTTCCEEEEECSS----------------HHHHHHHHHHHHHTTCCEEEEECHHHHHHH------T-T-
T ss_pred cHHHHHHHHHHHCCcEEEEEeeCC----------------HHHHHHHHHHHHHhCCCEEEEcChhHHhhc------c-H-
Confidence 345778888899999999988631 46888999999999999876432 322111 0 0
Q ss_pred HHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhh----cCCCc-eeEeeecccc
Q psy13372 126 YTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRA----HGISN-VQLQFDFFNA 192 (273)
Q Consensus 126 ~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~----~~~~~-~g~~~D~~h~ 192 (273)
..+..+...|++++|.++|+- . | ..+.+...+.+ +. .+.|. =.+.+|-+|.
T Consensus 69 -----~~~~~~~~~A~~~~VPVaLHl-D---H----g~~~e~i~~ai---~~~~~~~~~~GFtSVMiDgS~~ 124 (306)
T 3pm6_A 69 -----LLVRTAASACRAASVPITLHL-D---H----AQDPEIIKRAA---DLSRSETHEPGFDSIMVDMSHF 124 (306)
T ss_dssp -----HHHHHHHHHHHHCSSCEEEEE-E---E----ECCHHHHHHHH---HTC------CCCSEEEECCTTS
T ss_pred -----HHHHHHHHHHHHCCCCEEEEc-C---C----CCCHHHHHHHH---HhhhhccCCCCCCEEEEeCCCC
Confidence 123344567788999999996 1 2 34556656666 42 12222 3566776665
No 339
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=56.57 E-value=99 Score=26.83 Aligned_cols=100 Identities=16% Similarity=0.028 Sum_probs=60.7
Q ss_pred HHHHHHcCCeeEEEecCCc-cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEe-c--CCCCCC----CC-C-CCCCC
Q psy13372 53 VAAQTRHGLKQVLINTEVD-ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHI-M--SGKTES----SR-T-QPIAS 122 (273)
Q Consensus 53 ~~~l~~~gL~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~-~--~G~~~~----~~-~-~~~~~ 122 (273)
.+.+++.|+..+-+-+... ... ....|-.. ..++.+.++|+.|.+.|...|.- | +|.... .. . .....
T Consensus 79 ~~~ik~~G~N~VRipi~~~~~~~-~~~~py~~-~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~~sG~~~~~~w~~ 156 (399)
T 3n9k_A 79 FKQISNLGLNFVRIPIGYWAFQL-LDNDPYVQ-GQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQN 156 (399)
T ss_dssp HHHHHHTTCCEEEEEEEGGGTCC-CTTCCCCC-CHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTS
T ss_pred HHHHHHcCCCEEEEcccHHHccC-CCCCccch-hHHHHHHHHHHHHHHCCCEEEEEecCCCcccccccCCCCCCCCCCCC
Confidence 4446788988876544211 000 00011110 14789999999999999997643 3 343211 00 0 00113
Q ss_pred cchHHHHHHHHHHHHHHHhhC---CcEEEEccCCC
Q psy13372 123 EDPYTTLKENLIYACAELERH---SLTALIEPVNQ 154 (273)
Q Consensus 123 ~~~~~~~~~~l~~l~~~a~~~---gv~i~lE~~~~ 154 (273)
+...+++++.++++++..+.. ...+++|.++-
T Consensus 157 ~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NE 191 (399)
T 3n9k_A 157 GDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNE 191 (399)
T ss_dssp TTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSC
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCCceEEEEeccC
Confidence 347888899999999988887 77889998764
No 340
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=56.52 E-value=78 Score=25.57 Aligned_cols=177 Identities=18% Similarity=0.088 Sum_probs=103.9
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCC--CCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPV--GVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
++.+..+...+.|.++|.+..... ....+.++.+.+..++.+..= .+ . .++ + .++.|..
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~k------df-I-~d~---------~--qi~~a~~ 126 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRK------DF-V-VDP---------F--MLEEARA 126 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEEE------SC-C-CSH---------H--HHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEEC------Cc-C-CCH---------H--HHHHHHH
Confidence 678888888899999998853311 135667777666767665421 11 1 111 1 3566888
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
+||..|.+..... . +.++++...++..|+...+|.+ +.+++.+.+ + .+
T Consensus 127 ~GAD~VlL~~~~l--------------~---~~l~~l~~~a~~lGl~~lvev~-----------~~~E~~~a~---~-~g 174 (254)
T 1vc4_A 127 FGASAALLIVALL--------------G---ELTGAYLEEARRLGLEALVEVH-----------TERELEIAL---E-AG 174 (254)
T ss_dssp TTCSEEEEEHHHH--------------G---GGHHHHHHHHHHHTCEEEEEEC-----------SHHHHHHHH---H-HT
T ss_pred cCCCEEEECccch--------------H---HHHHHHHHHHHHCCCeEEEEEC-----------CHHHHHHHH---H-cC
Confidence 9999999854221 1 3578888889899999888864 355665555 3 44
Q ss_pred CCceeEeeecccccccCCChHHHHHhcCCcc-----eeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee-
Q psy13372 180 ISNVQLQFDFFNAQRICGDLTHTFGACRDLI-----GHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK- 253 (273)
Q Consensus 180 ~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i-----~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~- 253 (273)
.+.+|+..=..+ ..+.|+. ...++.+.+ ...-++ ..|.-...++.+. .+ |.+|.++-+-.
T Consensus 175 ad~IGvn~~~l~--~~~~dl~-~~~~L~~~i~~~~~~~~vIA---------egGI~s~~dv~~l-~~-Ga~gvlVGsAl~ 240 (254)
T 1vc4_A 175 AEVLGINNRDLA--TLHINLE-TAPRLGRLARKRGFGGVLVA---------ESGYSRKEELKAL-EG-LFDAVLIGTSLM 240 (254)
T ss_dssp CSEEEEESBCTT--TCCBCTT-HHHHHHHHHHHTTCCSEEEE---------ESCCCSHHHHHTT-TT-TCSEEEECHHHH
T ss_pred CCEEEEccccCc--CCCCCHH-HHHHHHHhCccccCCCeEEE---------EcCCCCHHHHHHH-Hc-CCCEEEEeHHHc
Confidence 466777542221 1123332 222222222 111222 2044446665554 55 99999998843
Q ss_pred cCCChHHHHH
Q psy13372 254 PQGNTKEGLE 263 (273)
Q Consensus 254 ~~~~~~~~~~ 263 (273)
...++.+.++
T Consensus 241 ~~~d~~~~~~ 250 (254)
T 1vc4_A 241 RAPDLEAALR 250 (254)
T ss_dssp TSSCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 4567777766
No 341
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=56.41 E-value=79 Score=25.61 Aligned_cols=22 Identities=14% Similarity=-0.097 Sum_probs=16.3
Q ss_pred CHHHHHHHH---HHcCCCeEEecCC
Q psy13372 22 NYLDKYRVA---AELGFRYIESWFP 43 (273)
Q Consensus 22 ~~~~~l~~~---~~~G~~~vEl~~~ 43 (273)
++++.++.+ .+.|.|.||+..+
T Consensus 30 ~~~e~~~~~~~~~~~~~D~vElRvD 54 (257)
T 2yr1_A 30 DDRKVLREAEEVCRKQPDLLEWRAD 54 (257)
T ss_dssp SHHHHHHHHHHHHHSCCSEEEEEGG
T ss_pred CHHHHHHHHHHHhhcCCCEEEEEee
Confidence 556665544 5579999999976
No 342
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=56.24 E-value=26 Score=31.75 Aligned_cols=64 Identities=8% Similarity=-0.066 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchH--------------HHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPY--------------TTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~--------------~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+.++..+.+.+.+|.... ++....+. .+... -...+-+++++++|++.||++..|-
T Consensus 173 ~~~ik~~id~ma~~KlN~lh~HltDdq~wriei~~-~P~Lt~~ga~~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIPEI 251 (512)
T 1jak_A 173 VDEVKRYIDRVARYKYNKLHLHLSDDQGWRIAIDS-WPRLATYGGSTEVGGGPGGYYTKAEYKEIVRYAASRHLEVVPEI 251 (512)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECBCSSCBCBCCTT-STHHHHTTTSCCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeccCCCceehhhh-hHHHHhhcCccccCCCCCCCCCHHHHHHHHHHHHHcCCEEEEcc
Confidence 67899999999999999999987542 11100000 11110 1235779999999999999999995
No 343
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=56.21 E-value=5 Score=34.63 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHcCCCeEEecC
Q psy13372 22 NYLDKYRVAAELGFRYIESWF 42 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~ 42 (273)
.+.++.+.++++|||+|||+.
T Consensus 153 ~F~~AA~rA~~AGFDgVEIH~ 173 (358)
T 4a3u_A 153 DYEKAARHALKAGFDGVQIHA 173 (358)
T ss_dssp HHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHHcCCCeEeecc
Confidence 466677788999999999984
No 344
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=56.16 E-value=39 Score=31.06 Aligned_cols=64 Identities=14% Similarity=0.077 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHH---------HHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYT---------TLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~---------~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+.++..+.+.+++|.... +....-+ ..+...+ ...+-+++++++|++.||++..|-
T Consensus 203 ~~~ik~~id~mA~~KlN~lH~HltDdqgwrlei~-~~P~Lt~~Ga~~~~~~YT~~di~eiv~yA~~rgI~VIPEI 276 (572)
T 3ozo_A 203 IESIKRTIEAMAAVKLNTFHWHITDSQSFPFVTT-KRPNLYKFGALSPQKVYTKAAIREVVRFGLERGVRVLPEF 276 (572)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCSSCCCBCCS-SSHHHHHHHSSSSSSCBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHcCCceEEEEeecCcCceeccc-cCcchhccCCcCCCCCcCHHHHHHHHHHHHHhCCceeeee
Confidence 67899999999999999999997432 1110000 0111111 135679999999999999999995
No 345
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=55.83 E-value=51 Score=24.55 Aligned_cols=78 Identities=5% Similarity=-0.173 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcc
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLI 210 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i 210 (273)
+-.+.+.+.|++.|+.+.+-- .+...++++-+ .+.....-|+.++.+-+.-..--+.|.++.+.--+
T Consensus 30 di~~~l~~~a~~~g~~l~~~Q----------SN~EGeLId~I---h~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~ 96 (154)
T 1uqr_A 30 DIEQHLQQSAQAQGYELDYFQ----------ANGEESLINRI---HQAFQNTDFIIINPGAFTHTSVAIRDALLAVSIPF 96 (154)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE----------CSSHHHHHHHH---HHTTTTCCEEEEECTTHHHHCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHCCCEEEEEe----------eCCHHHHHHHH---HHhhhcCcEEEECcchhccchHHHHHHHHhCCCCE
Confidence 334455677888998765432 33455666666 76654567899998755333344788899998888
Q ss_pred eeEEeccCCCC
Q psy13372 211 GHVQIAQAPDR 221 (273)
Q Consensus 211 ~~vHi~d~~~~ 221 (273)
.-||+++...|
T Consensus 97 VEVHiSNi~aR 107 (154)
T 1uqr_A 97 IEVHLSNVHAR 107 (154)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEecCcccc
Confidence 89999986433
No 346
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=55.75 E-value=79 Score=25.41 Aligned_cols=111 Identities=9% Similarity=-0.041 Sum_probs=61.5
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccc---cCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDEN---FGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.+...++|+|=+..... .......+.+.+.|+.++.+....... ...+ -...+..+..+.+.+...+.
T Consensus 51 ~~~i~~l~~~~vdgiii~~~~~-~~~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~---~V~~D~~~~g~~a~~~l~~~ 126 (297)
T 3rot_A 51 VQFIESALATYPSGIATTIPSD-TAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLV---FLGSDNLLAGKKLGEKALEL 126 (297)
T ss_dssp HHHHHHHHHTCCSEEEECCCCS-STTHHHHHHHHHHTCCEEEESCCCSCTTTSCCSC---EEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCH-HHHHHHHHHHHHCCCCEEEEcCCCccccccCcce---EEccChHHHHHHHHHHHHHh
Confidence 3556667778899987754322 333455566778899999887543210 0011 01111123455566666677
Q ss_pred C--CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 101 N--IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 101 G--~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
| .+.|.+..|.... ....++++-..+..+++|+.+...
T Consensus 127 g~~~~~i~~i~g~~~~------------~~~~~R~~Gf~~~l~~~g~~~~~~ 166 (297)
T 3rot_A 127 TPSAKRALVLNPQPGH------------IGLEKRAYGIKTILQDKGIFFEEL 166 (297)
T ss_dssp CTTCCEEEEEESCTTC------------HHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCCceEEEEeCCCCc------------HHHHHHHHHHHHHHHhcCCeEEEe
Confidence 8 8888776554321 122234444455566678887544
No 347
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=55.48 E-value=1.1e+02 Score=27.06 Aligned_cols=92 Identities=12% Similarity=0.071 Sum_probs=55.9
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE--EEEccCCCCCCCCcccCCHHHHH
Q psy13372 92 KTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT--ALIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 92 ~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~--i~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
..++.....|-.+...-|...+..+. .. .+..-+.-.+.|++|++.|++.||+ .+|.|- . +....+.++..
T Consensus 21 ~l~~f~g~~kmNtYiYAPKDDpyhr~-~W-Re~Yp~eel~~l~eLv~~a~~~~V~Fv~aisPG--~---di~~s~~~d~~ 93 (447)
T 2xsa_A 21 TVMDWIAAAGMNTYIYGPKDDVHVRA-RW-RVPYDAAGLARLTELRDAAAARGMVFYVSLAPC--L---DVTYSDPQDRA 93 (447)
T ss_dssp HHHHHHHHTTCCEEEECCTTCTTTTT-TT-TSCCCHHHHHHHHHHHHHHHTTTCEEEEEECCC--S---SCCTTCHHHHH
T ss_pred HHHHHHHHcCCceEEEccCCChHHHH-hh-cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCC--c---ccCCCCHHHHH
Confidence 46777788999988876654332211 00 1112233445799999999999996 556651 1 11223456666
Q ss_pred HHHHHHh---hcCCCceeEeeecc
Q psy13372 170 RLIRELR---AHGISNVQLQFDFF 190 (273)
Q Consensus 170 ~li~~~~---~~~~~~~g~~~D~~ 190 (273)
.|++-|+ .++-..+++++|=-
T Consensus 94 ~L~~K~~ql~~lGVr~FaIlfDDI 117 (447)
T 2xsa_A 94 ALLARVDQLARAGLRNLVLLFDDI 117 (447)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSC
T ss_pred HHHHHHHHHHHhCCCEEEEeccCC
Confidence 6664443 34667799999863
No 348
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A*
Probab=55.46 E-value=17 Score=31.62 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=27.3
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC------CC-------HHHHHHHHHHcC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG------VT-------LEQLVAAQTRHG 60 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~------~~-------~~~~~~~l~~~g 60 (273)
...+++++++.|||||+|.+.+.. .+ ++++++.+++.+
T Consensus 99 i~siv~~l~~~gfDGiDiDwEyP~~~g~~~~d~~nf~~ll~eLr~~l~~~~ 149 (395)
T 3fy1_A 99 ITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEA 149 (395)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEeEcCCCCCCChhHHHHHHHHHHHHHHHHHHhh
Confidence 455678899999999999975421 11 377888887765
No 349
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=55.01 E-value=36 Score=27.20 Aligned_cols=61 Identities=13% Similarity=0.091 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHH-H-hhCCcEEEE
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAE-L-ERHSLTALI 149 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~-a-~~~gv~i~l 149 (273)
....+.+++.++.|..+|++++++..-.. +..+ ++...+.+.+.+.+.... . .+.||++-+
T Consensus 30 ~~G~~~l~~i~~~c~~~GI~~lTlYaFSteN~kR-----p~~Ev~~Lm~l~~~~l~~~~~~~~~vrv~~ 93 (227)
T 2vg0_A 30 RMGAAKIAEMLRWCHEAGIELATVYLLSTENLQR-----DPDELAALIEIITDVVEEICAPANHWSVRT 93 (227)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEEEETGGGGS-----CHHHHHHHHHHHHHHHHHHTCTTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEEeecccccCC-----CHHHHHHHHHHHHHHHHHHhccccCeEEEe
Confidence 35578999999999999999999865321 1221 233334444444333322 1 267777654
No 350
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=54.96 E-value=62 Score=23.97 Aligned_cols=96 Identities=11% Similarity=0.001 Sum_probs=62.3
Q ss_pred HHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCC-ceeEeeecccccccCCChHHHHHhcCCcc
Q psy13372 132 NLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS-NVQLQFDFFNAQRICGDLTHTFGACRDLI 210 (273)
Q Consensus 132 ~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~-~~g~~~D~~h~~~~~~~~~~~i~~~~~~i 210 (273)
-.+.+.+.|++.|+.+.+-- .+...++++-+ .+.... .-|+.++.+-+.-..--+.|.++.+.--+
T Consensus 29 i~~~l~~~a~~~g~~v~~~Q----------SN~EgeLId~I---h~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~ 95 (149)
T 2uyg_A 29 LEALCEAWGAELGLGVVFRQ----------TNYEGQLIEWV---QQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPV 95 (149)
T ss_dssp HHHHHHHHHHHTTCCEEEEE----------CSCHHHHHHHH---HHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCE
T ss_pred HHHHHHHHHHHcCCEEEEEe----------eCCHHHHHHHH---HHhccCCeeEEEEccchhccccHHHHHHHHhCCCCE
Confidence 34455567888888765432 33455666666 766544 56899998765333344789999998888
Q ss_pred eeEEeccCCCCCC---------------CCCCCcccHHHHHHHHHH
Q psy13372 211 GHVQIAQAPDRQE---------------PHARGEIDYAYVFELLAR 241 (273)
Q Consensus 211 ~~vHi~d~~~~~~---------------~g~~G~id~~~i~~~L~~ 241 (273)
.-||+++...|.+ .|- |.--|..-++.+.+
T Consensus 96 VEVHiSNi~aRE~FRh~S~~s~~a~GvI~G~-G~~gY~lAl~~~~~ 140 (149)
T 2uyg_A 96 VEVHLTNLHAREEFRRHSVTAPACRGIVSGF-GPLSYKLALVYLAE 140 (149)
T ss_dssp EEEESSCGGGSCGGGGCCSSGGGSSEEEESS-TTHHHHHHHHHHHH
T ss_pred EEEEecCcccccccccccccccceeEEEEec-CHHHHHHHHHHHHH
Confidence 8999998643321 255 66666666666543
No 351
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=54.69 E-value=46 Score=27.15 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+...+.++.++++|+..|...+..... + +...... ..+.++.+.+++++.|+.+.-|++.+
T Consensus 36 ~e~a~~~a~~l~~~Ga~~vk~~~fkprt--s-~~~~~g~---~~egl~~l~~~~~~~Gl~~~te~~d~ 97 (262)
T 1zco_A 36 REQIMKVAEFLAEVGIKVLRGGAFKPRT--S-PYSFQGY---GEKALRWMREAADEYGLVTVTEVMDT 97 (262)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSSCCCS--S-TTSCCCC---THHHHHHHHHHHHHHTCEEEEECCCG
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecccCC--C-cccccCc---cHHHHHHHHHHHHHcCCcEEEeeCCH
Confidence 3566778888899999988875433211 1 1111111 16678888888899999999999753
No 352
>1gqi_A Alpha-glucuronidase; (alpha-beta)8 barrel, glycoside hydrolase; 1.48A {Pseudomonas cellulosa} SCOP: c.1.8.10 d.92.2.2 PDB: 1gqj_A* 1gqk_A* 1gql_A* 1h41_A*
Probab=54.68 E-value=32 Score=32.31 Aligned_cols=55 Identities=5% Similarity=0.064 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
.+++...++.+.+|+..+++. +++.. +.-......+.+.++++..+.+||++.|=
T Consensus 184 ~R~~dYAR~lASiGINgvvlN--NVNa~------~~~lt~~~l~~v~~lAd~fRpYGIkv~LS 238 (708)
T 1gqi_A 184 PRYTDYARINASLGINGTVIN--NVNAD------PRVLSDQFLQKIAALADAFRPYGIKMYLS 238 (708)
T ss_dssp HHHHHHHHHHHTTTCCEEECS--CSSCC------GGGGSHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred HHHHHHHHHHhhcCcceEEec--CCCCC------cccCCcHHHHHHHHHHHHHHhhcCeEEEE
Confidence 457778888899999999983 34432 33445567888999999999999999987
No 353
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=54.67 E-value=64 Score=24.02 Aligned_cols=78 Identities=5% Similarity=-0.115 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcc
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLI 210 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i 210 (273)
+-.+.+.+.|.+.|+.+.+-- .+...++++-+ .+.....-|+.++.+-+.-..--+.|.++.+.--+
T Consensus 36 di~~~l~~~a~~~g~~~~~~Q----------SN~EgeLId~I---h~a~~~~dgiiINpgA~THtSvAlrDAl~~~~~P~ 102 (153)
T 3lwz_A 36 EIVSQLEIQAQGMDVALSHLQ----------SNAEHALIDSI---HQARGNTDFILINPAAFTHTSVALRDALLGVQIPF 102 (153)
T ss_dssp HHHHHHHHHHHHTTEEEEEEE----------CSCHHHHHHHH---HHHTTTCSEEEEECGGGGGTCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHcCCEEEEEe----------cCCHHHHHHHH---HHhhhcCceEEEccccceechHHHHHHHHhcCCCE
Confidence 334455667888898765432 33455666666 66554567899998765433334778888888788
Q ss_pred eeEEeccCCCC
Q psy13372 211 GHVQIAQAPDR 221 (273)
Q Consensus 211 ~~vHi~d~~~~ 221 (273)
.-||+++...|
T Consensus 103 VEVHiSNi~aR 113 (153)
T 3lwz_A 103 IEIHLSNVHAR 113 (153)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEcCCcccc
Confidence 89999986443
No 354
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=54.65 E-value=67 Score=29.06 Aligned_cols=112 Identities=12% Similarity=0.100 Sum_probs=65.9
Q ss_pred cccccccccCHHHHHHHHHHcC--CCeEEecCCCCC-CC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHH
Q psy13372 13 TLLFNDLAANYLDKYRVAAELG--FRYIESWFPPVG-VT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEF 86 (273)
Q Consensus 13 ~~~~~~~~~~~~~~l~~~~~~G--~~~vEl~~~~~~-~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
..++.+. .+.++++.+++.| ..-+-+..+.+. +. +..+.+++++.|++-+.++.+.++.. ..|.....
T Consensus 89 g~~~~~~--~~~~~~~~~~~~~~~~H~~gl~sdggvhsh~~hl~~l~~~a~~~g~~~v~~H~~~dGrD---~~p~s~~~- 162 (511)
T 1o98_A 89 GEFDRNE--TFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRD---VGPQTAPQ- 162 (511)
T ss_dssp TCGGGCH--HHHHHHHHHHHHTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCCEEEEEEECSSS---SCTTCHHH-
T ss_pred CCcccCH--HHHHHHHHHHhcCCeEEEEEeccCCCCccHHHHHHHHHHHHHHCCCCeEEEEEEccCCC---CCCchHHH-
Confidence 3455554 6889999998866 344444434221 22 45667778899996555555444332 34555444
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHH
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYAC 137 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~ 137 (273)
++++..+..+++|+..|...+|+.=.. +.+..|+++.+.++.++
T Consensus 163 --~~~~~~~~~~~~~~~~ias~~GR~yam-----drd~rw~rv~~ay~~~~ 206 (511)
T 1o98_A 163 --YIKELQEKIKEYGVGEIATLSGRYYSM-----DRDKRWDRVEKAYRAMV 206 (511)
T ss_dssp --HHHHHHHHHHHHTCCEEEEEEEHHHHT-----CCSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHhCCEEEEEEeccceee-----cCccChHHHHHHHHHHH
Confidence 444555555567877777777764221 14556777777766655
No 355
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=54.29 E-value=19 Score=29.22 Aligned_cols=43 Identities=12% Similarity=-0.009 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~ 65 (273)
+.++.++.++++|.|.|.+..... ..+.+..+.++++|+++..
T Consensus 97 ~p~~~i~~~~~aGAd~itvH~Ea~-~~~~~~i~~ir~~G~k~Gv 139 (246)
T 3inp_A 97 PVDALIESFAKAGATSIVFHPEAS-EHIDRSLQLIKSFGIQAGL 139 (246)
T ss_dssp SCHHHHHHHHHHTCSEEEECGGGC-SCHHHHHHHHHTTTSEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEccccc-hhHHHHHHHHHHcCCeEEE
Confidence 456778889999999999986543 4677777788999987753
No 356
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=54.17 E-value=1e+02 Score=28.64 Aligned_cols=139 Identities=14% Similarity=0.004 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecCCCCCC---------------------------CHHHHHHHHHHc--CCee-EEEecCC
Q psy13372 21 ANYLDKYRVAAELGFRYIESWFPPVGV---------------------------TLEQLVAAQTRH--GLKQ-VLINTEV 70 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~~~~~~---------------------------~~~~~~~~l~~~--gL~i-~~~~~~~ 70 (273)
+.+.++.+.+.++|||+||++.-.+ . ..+-+++..+.. +..+ .=+....
T Consensus 141 ~~~~~aA~~a~~aGfd~veih~~~g-yl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~ 219 (671)
T 1ps9_A 141 DNFARCAQLAREAGYDGVEVMGSEG-YLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLD 219 (671)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECBT-SHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccc-hHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccc
Q ss_pred ccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 71 DENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
....|.+ .+.....++.+...|+.++.++.|....... .......-...+..+..+.+..++.+.
T Consensus 220 ~~~~g~~---------~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~iPvi-- 284 (671)
T 1ps9_A 220 LVEDGGT---------FAETVELAQAIEAAGATIINTGIGWHEARIP----TIATPVPRGAFSWVTRKLKGHVSLPLV-- 284 (671)
T ss_dssp CSTTCCC---------HHHHHHHHHHHHHHTCSEEEEEECBTTCSSC----SSSTTSCTTTTHHHHHHHTTSCSSCEE--
T ss_pred cCCCCCC---------HHHHHHHHHHHHhcCCCEEEcCCCccccccc----cccccCCcchHHHHHHHHHHhcCceEE--
Q ss_pred cCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeE
Q psy13372 151 PVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQL 185 (273)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~ 185 (273)
...-+.+++++.+++ +.-.-..+++
T Consensus 285 -------~~Ggi~~~~~a~~~l---~~g~aD~V~~ 309 (671)
T 1ps9_A 285 -------TTNRINDPQVADDIL---SRGDADMVSM 309 (671)
T ss_dssp -------ECSSCCSHHHHHHHH---HTTSCSEEEE
T ss_pred -------EeCCCCCHHHHHHHH---HcCCCCEEEe
No 357
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=54.09 E-value=94 Score=25.79 Aligned_cols=132 Identities=11% Similarity=-0.005 Sum_probs=73.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg------~~s--------t~~ai~ 102 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIA-GVG------TNN--------TRTSVE 102 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEe-cCC------CCC--------HHHHHH
Confidence 3677788888999999988865221 122 22233333333 44332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+.+|+..+.+.+...... + .+.++++++.+++ +.++.+.+-|.+.. ...--+++...++.
T Consensus 103 la~~A~~~Gadavlv~~P~y~~~------~---~~~l~~~f~~ia~---a~~lPiilYn~P~~---tg~~l~~~~~~~La 167 (304)
T 3cpr_A 103 LAEAAASAGADGLLVVTPYYSKP------S---QEGLLAHFGAIAA---ATEVPICLYDIPGR---SGIPIESDTMRRLS 167 (304)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC------C---HHHHHHHHHHHHH---HCCSCEEEEECHHH---HSSCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCCCCCCC------C---HHHHHHHHHHHHH---hcCCCEEEEeCccc---cCcCCCHHHHHHHH
Confidence 77788899999876644332111 2 3566777766654 45788888886431 11223556655665
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 168 ---~---~pnIvgiKds 178 (304)
T 3cpr_A 168 ---E---LPTILAVXDA 178 (304)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEecC
Confidence 4 4775444443
No 358
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=53.94 E-value=20 Score=31.22 Aligned_cols=62 Identities=15% Similarity=0.021 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+...+.++.++++|+..|+.-+..... + |.+.. .+. .+.++.+.+++++.|+.+.-|++..
T Consensus 155 ~e~a~~~a~~~k~aGa~~vk~q~fkprt--s-~~~f~-gl~--~egl~~L~~~~~~~Gl~~~te~~d~ 216 (385)
T 3nvt_A 155 YEQVAAVAESIKAKGLKLIRGGAFKPRT--S-PYDFQ-GLG--LEGLKILKRVSDEYGLGVISEIVTP 216 (385)
T ss_dssp HHHHHHHHHHHHHTTCCEEECBSSCCCS--S-TTSCC-CCT--HHHHHHHHHHHHHHTCEEEEECCSG
T ss_pred HHHHHHHHHHHHHcCCCeEEcccccCCC--C-hHhhc-CCC--HHHHHHHHHHHHHcCCEEEEecCCH
Confidence 4667788888999999999876543211 1 11111 111 2677888999999999999999753
No 359
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep heparin, hormone-growth factor complex; HET: NAG BMA MAN; 1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1 PDB: 1jne_A*
Probab=53.85 E-value=31 Score=30.17 Aligned_cols=21 Identities=14% Similarity=0.282 Sum_probs=17.3
Q ss_pred HHHHHHHHHcCCCeEEecCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPP 44 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~ 44 (273)
..+++++++.|||||+|.+.+
T Consensus 113 ~s~v~~~~~~gfDGiDiDwEy 133 (420)
T 1jnd_A 113 RSAYELVKTYGFDGLDLAYQF 133 (420)
T ss_dssp HHHHHHHHHTTCSEEEEECCC
T ss_pred HHHHHHHHHcCCCceEEeeec
Confidence 445778999999999999754
No 360
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=53.83 E-value=77 Score=24.69 Aligned_cols=108 Identities=13% Similarity=0.023 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHc--CCCeEEecCCCC-CCCHHHHHHHHHHc-CCeeEE-EecCCccccCCCCCchhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAEL--GFRYIESWFPPV-GVTLEQLVAAQTRH-GLKQVL-INTEVDENFGYAAVKGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l~~~~~~--G~~~vEl~~~~~-~~~~~~~~~~l~~~-gL~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 96 (273)
++++.++.+.++ |.+.+|+.++.. ....+-++++.+.+ +..+.. ++.. ..+. ..++.
T Consensus 17 ~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~--------d~p~----------~~~~~ 78 (218)
T 3jr2_A 17 NLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVSTLRHNHPNHILVCDMKTT--------DGGA----------ILSRM 78 (218)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHHHHHHHCTTSEEEEEEEEC--------SCHH----------HHHHH
T ss_pred CHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHHHHHHhCCCCcEEEEEeec--------ccHH----------HHHHH
Confidence 678888877655 689999986521 02234444443442 555542 2211 1221 14577
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
+.+.|+..+++|.-.. .+.+.++.+.++++|+...+.-.++ .|++++.++.
T Consensus 79 ~~~aGad~i~vh~~~~-----------------~~~~~~~~~~~~~~g~~~~~d~l~~--------~T~~~~~~~~ 129 (218)
T 3jr2_A 79 AFEAGADWITVSAAAH-----------------IATIAACKKVADELNGEIQIEIYGN--------WTMQDAKAWV 129 (218)
T ss_dssp HHHHTCSEEEEETTSC-----------------HHHHHHHHHHHHHHTCEEEEECCSS--------CCHHHHHHHH
T ss_pred HHhcCCCEEEEecCCC-----------------HHHHHHHHHHHHHhCCccceeeeec--------CCHHHHHHHH
Confidence 7889999999985211 1235566677777899887654331 2556666666
No 361
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=53.69 E-value=37 Score=27.55 Aligned_cols=179 Identities=16% Similarity=0.057 Sum_probs=96.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCC---CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP---PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~---~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
++.++.+...+. ..+|.+-.. +. .+.+.+++..+.-++.+..= ++.. + .+ -+..+.
T Consensus 62 ~~~~iA~~y~~~-A~~IsVlTd~~~F~-gs~~dL~~ir~~v~lPvLrK------Dfi~--~---------~~--qi~ea~ 120 (251)
T 1i4n_A 62 SLEDFIRMYDEL-ADAISILTEKHYFK-GDPAFVRAARNLTCRPILAK------DFYI--D---------TV--QVKLAS 120 (251)
T ss_dssp CHHHHHHHHHHH-CSEEEEECCCSSSC-CCTHHHHHHHTTCCSCEEEE------CCCC--S---------TH--HHHHHH
T ss_pred CHHHHHHHHHHh-CCceEEEecccccC-CCHHHHHHHHHhCCCCEEEe------eCCC--C---------HH--HHHHHH
Confidence 455555555555 667766532 22 33444444444444444421 1111 1 12 244488
Q ss_pred HcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 99 ALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 99 ~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
..||..|-+..... .. +.|.++.+.|++.|+.+.+|.+ |.+++.+.+ +..
T Consensus 121 ~~GAD~ilLi~a~l---------~~-------~~l~~l~~~a~~lGl~~lvEv~-----------~~eE~~~A~---~l~ 170 (251)
T 1i4n_A 121 SVGADAILIIARIL---------TA-------EQIKEIYEAAEELGMDSLVEVH-----------SREDLEKVF---SVI 170 (251)
T ss_dssp HTTCSEEEEEGGGS---------CH-------HHHHHHHHHHHTTTCEEEEEEC-----------SHHHHHHHH---TTC
T ss_pred HcCCCEEEEecccC---------CH-------HHHHHHHHHHHHcCCeEEEEeC-----------CHHHHHHHH---hcC
Confidence 89999988764322 11 4688899999999999999963 566766666 431
Q ss_pred CCCceeEeeecccccccCCChHHHHHhcCCcce--eEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee-cC
Q psy13372 179 GISNVQLQFDFFNAQRICGDLTHTFGACRDLIG--HVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK-PQ 255 (273)
Q Consensus 179 ~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~--~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~-~~ 255 (273)
+.+-+|++. -+....+.|+.... ++.+.+. .+-++.. |.-.... ++.+.+. +++.++=|-. ..
T Consensus 171 g~~iIGinn--r~l~t~~~d~~~~~-~l~~~ip~~~~vIaEs---------GI~t~ed-v~~~~~~-a~avLVG~aimr~ 236 (251)
T 1i4n_A 171 RPKIIGINT--RDLDTFEIKKNVLW-ELLPLVPDDTVVVAES---------GIKDPRE-LKDLRGK-VNAVLVGTSIMKA 236 (251)
T ss_dssp CCSEEEEEC--BCTTTCCBCTTHHH-HHGGGSCTTSEEEEES---------CCCCGGG-HHHHTTT-CSEEEECHHHHHC
T ss_pred CCCEEEEeC--cccccCCCCHHHHH-HHHHhCCCCCEEEEeC---------CCCCHHH-HHHHHHh-CCEEEEcHHHcCC
Confidence 656677775 22222233433322 2222221 1223321 3333444 4455566 8888877743 35
Q ss_pred CChHHHHHHH
Q psy13372 256 GNTKEGLEEF 265 (273)
Q Consensus 256 ~~~~~~~~~~ 265 (273)
.++.+.++++
T Consensus 237 ~d~~~~~~~l 246 (251)
T 1i4n_A 237 ENPRRFLEEM 246 (251)
T ss_dssp SSHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 6777777633
No 362
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=53.67 E-value=20 Score=28.70 Aligned_cols=43 Identities=21% Similarity=0.105 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-CCCCHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-VGVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-~~~~~~~~~~~l~~~gL~i~~ 65 (273)
+.++.++.++++|.+.|-+.... . ....++.+.++++|+.+..
T Consensus 68 dp~~~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv 111 (231)
T 3ctl_A 68 RPQDYIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGL 111 (231)
T ss_dssp CGGGTHHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEE
Confidence 34556788899999999988654 4 4678888889999988764
No 363
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=53.51 E-value=95 Score=25.70 Aligned_cols=132 Identities=11% Similarity=0.005 Sum_probs=73.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcC--CeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHG--LKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~g--L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
.+...+++..+.|.++|=+.+.-++ .+. +-++...+..+ +.+.. ++- ..+ .+...+
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia-Gvg------~~~--------t~~ai~ 98 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIA-GTG------SNN--------THASID 98 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECC------CSC--------HHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEe-CCC------CCC--------HHHHHH
Confidence 3667788888999999998875321 122 22223333332 44332 221 111 234556
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 93 TIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|+++|+..+.+.+...... ..+.++++++.++ ++.++.+.+-|.+.. ...--+++...++.
T Consensus 99 la~~A~~~Gadavlv~~P~y~~~---------s~~~l~~~f~~va---~a~~lPiilYn~P~~---tg~~l~~~~~~~La 163 (301)
T 1xky_A 99 LTKKATEVGVDAVMLVAPYYNKP---------SQEGMYQHFKAIA---ESTPLPVMLYNVPGR---SIVQISVDTVVRLS 163 (301)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCC---------CHHHHHHHHHHHH---HTCSSCEEEEECHHH---HSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCCCCCC---------CHHHHHHHHHHHH---HhcCCCEEEEeCccc---cCCCCCHHHHHHHH
Confidence 77788899999876644332111 2356666676654 455788888886421 11223566666666
Q ss_pred HHHhhcCCCceeEeeec
Q psy13372 173 RELRAHGISNVQLQFDF 189 (273)
Q Consensus 173 ~~~~~~~~~~~g~~~D~ 189 (273)
+ .||+--.=|.
T Consensus 164 ---~---~pnIvgiKds 174 (301)
T 1xky_A 164 ---E---IENIVAIKDA 174 (301)
T ss_dssp ---T---STTEEEEEEC
T ss_pred ---c---CCCEEEEEcC
Confidence 4 3775444443
No 364
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=53.18 E-value=99 Score=25.77 Aligned_cols=43 Identities=12% Similarity=0.049 Sum_probs=23.5
Q ss_pred CHHHHHH---HHHHcCCCeEEecCCCC-C---CCHHHHHHHHHHcCCeeE
Q psy13372 22 NYLDKYR---VAAELGFRYIESWFPPV-G---VTLEQLVAAQTRHGLKQV 64 (273)
Q Consensus 22 ~~~~~l~---~~~~~G~~~vEl~~~~~-~---~~~~~~~~~l~~~gL~i~ 64 (273)
+.++.++ .+.+.|++.|-+.+..+ . ....++.+.+++.++.+.
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~ 134 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVT 134 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEE
Confidence 5555544 45567888888874321 0 123444455555566555
No 365
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=53.09 E-value=92 Score=26.50 Aligned_cols=69 Identities=9% Similarity=0.074 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
...++.+.++|+.|.+.|...|.-.-.. +.........+...+.+.+.++++++..+.+.-.+++|.++
T Consensus 99 ~~~l~~~~~vv~~a~~~Gi~vildlH~~-~~~~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~N 167 (376)
T 3ayr_A 99 EKWLKRVHEVVDYPYKNGAFVILNLHHE-TWNHAFSETLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLN 167 (376)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEECCSC-SSCCSCTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCS
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCc-ccccccccchHHHHHHHHHHHHHHHHHHcCCCceeeEEeec
Confidence 3467899999999999999876542221 11100000023345566666778877777765447888765
No 366
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens}
Probab=53.06 E-value=23 Score=30.76 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=31.9
Q ss_pred HHHHHHHHHHcCCCeEEecC-CCC-CCC-------HHHHHHHHHHcCCeeEEE
Q psy13372 23 YLDKYRVAAELGFRYIESWF-PPV-GVT-------LEQLVAAQTRHGLKQVLI 66 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~-~~~-~~~-------~~~~~~~l~~~gL~i~~~ 66 (273)
...+++.+++.|||||+|.+ .+. ..+ ++++++.+++.|+.++..
T Consensus 174 i~siv~~~~~~gfDGidiDfWE~p~~~d~~~~~~ll~eLr~~l~~~~~~Lsia 226 (393)
T 3bxw_B 174 SKTVVQVAKNQHFDGFVVEVWNQLLSQKRVGLIHMLTHLAEALHQARLLALLV 226 (393)
T ss_dssp HHHHHHHHHHHTCCEEEEECGGGCCC-CHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCCCEEecccccCChhhHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence 45678889999999999973 321 122 478899999888877643
No 367
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=52.90 E-value=83 Score=24.84 Aligned_cols=87 Identities=9% Similarity=0.022 Sum_probs=51.0
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCC-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESS-RTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
+...++.++++|.+.|-+........ .. . .........+.++++.+.++++|+++..-... ...........
T Consensus 24 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~----~~~~~~~~~~~ 96 (262)
T 3p6l_A 24 LTEALDKTQELGLKYIEIYPGHKLGGKWG-D--KVFDFNLDAQTQKEIKELAASKGIKIVGTGVY----VAEKSSDWEKM 96 (262)
T ss_dssp HHHHHHHHHHTTCCEEEECTTEECCGGGT-T--CEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE----CCSSTTHHHHH
T ss_pred HHHHHHHHHHcCCCEEeecCCcccccccc-c--ccccccCCHHHHHHHHHHHHHcCCeEEEEecc----CCccHHHHHHH
Confidence 56789999999999999875432100 00 0 00000011234667778888999986544321 11234455666
Q ss_pred HHHHHHHhhcCCCceeEe
Q psy13372 169 ERLIRELRAHGISNVQLQ 186 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~~ 186 (273)
+++. +.++.+.+.+.
T Consensus 97 i~~A---~~lGa~~v~~~ 111 (262)
T 3p6l_A 97 FKFA---KAMDLEFITCE 111 (262)
T ss_dssp HHHH---HHTTCSEEEEC
T ss_pred HHHH---HHcCCCEEEec
Confidence 6666 88888877765
No 368
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=52.83 E-value=61 Score=24.90 Aligned_cols=73 Identities=11% Similarity=0.114 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
..+..++.++++|.++|-+..........++.+.++++|+.+.. .+. ++ .. ....++.+..+|
T Consensus 65 ~~~~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v-~~~-------~~--~t-------~~~~~~~~~~~g 127 (211)
T 3f4w_A 65 GGHFESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVV-DMI-------CV--DD-------LPARVRLLEEAG 127 (211)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEE-ECT-------TC--SS-------HHHHHHHHHHHT
T ss_pred chHHHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEE-Eec-------CC--CC-------HHHHHHHHHHcC
Confidence 44556999999999999997432213457888889999988753 111 01 10 112345556789
Q ss_pred CCeEEecCCC
Q psy13372 102 IPAIHIMSGK 111 (273)
Q Consensus 102 ~~~i~~~~G~ 111 (273)
+..|.+.+|.
T Consensus 128 ~d~i~v~~g~ 137 (211)
T 3f4w_A 128 ADMLAVHTGT 137 (211)
T ss_dssp CCEEEEECCH
T ss_pred CCEEEEcCCC
Confidence 9998887663
No 369
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=52.49 E-value=32 Score=26.12 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=38.8
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.++.|++.||+- -+..+.--.++++.+..++.| |+++|+|... .-+.++-=|+ .+.
T Consensus 22 ~A~~ViIvPGYG-----------mAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGhmNVLL---AEA 79 (180)
T 1pno_A 22 NASKVIIVPGYG-----------MAVAQAQHALREMADVLKKEGVEVSYAIHPVAG--------RMPGHMNVLL---AEA 79 (180)
T ss_dssp TCSEEEEEECHH-----------HHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCT--------TSTTHHHHHH---HHT
T ss_pred hCCeEEEECChH-----------HHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc--------cCCCcceEEE---Eee
Confidence 678888888752 233344456788888888888 5789999652 2244555566 665
Q ss_pred CCCc
Q psy13372 179 GISN 182 (273)
Q Consensus 179 ~~~~ 182 (273)
+-|.
T Consensus 80 ~VPY 83 (180)
T 1pno_A 80 NVPY 83 (180)
T ss_dssp TCCG
T ss_pred CCCH
Confidence 5453
No 370
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=52.35 E-value=56 Score=26.88 Aligned_cols=113 Identities=9% Similarity=0.082 Sum_probs=62.9
Q ss_pred CH-HHHHHHHHHcCCCeEEecC--C--CCC-----------CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHH
Q psy13372 22 NY-LDKYRVAAELGFRYIESWF--P--PVG-----------VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESE 85 (273)
Q Consensus 22 ~~-~~~l~~~~~~G~~~vEl~~--~--~~~-----------~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
++ ++.++.+.+.|.+..=+.. + +.. ...+.+.+..+++.-.+..+.. + ++...+.
T Consensus 38 ~~~~~~l~~m~~~GV~~~v~~~~~p~~~~~~d~~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~-------v--~p~~~~~ 108 (327)
T 2dvt_A 38 DIQDTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRANDVLAEECAKRPDRFLAFAA-------L--PLQDPDA 108 (327)
T ss_dssp CSSSHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHHHHHHHHHHHCTTTEEEEEC-------C--CTTSHHH
T ss_pred ChhHHHHHHhhhcCCcEEEEeCCCCcccccCChHHHHHHHHHHHHHHHHHHhhCCCceEEEee-------c--CcCCHHH
Confidence 44 7889999999998774442 2 000 1124566667777654543322 1 1112233
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+.+.+++++ +..|+.-|.+++.........+.... -+.+..+.+.|+++|+.+.+++-
T Consensus 109 ~~~el~~~~---~~~g~~gi~i~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~lpv~iH~~ 166 (327)
T 2dvt_A 109 ATEELQRCV---NDLGFVGALVNGFSQEGDGQTPLYYD------LPQYRPFWGEVEKLDVPFYLHPR 166 (327)
T ss_dssp HHHHHHHHH---HTTCCCEEEEESSBCCTTCCSCBCTT------SGGGHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHH---hcCCceEEEECCCCCCCcccCCCCCC------CcchHHHHHHHHHcCCeEEECCC
Confidence 445555544 45799988876543210000000011 13567778889999999999974
No 371
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=52.04 E-value=92 Score=25.10 Aligned_cols=55 Identities=13% Similarity=-0.002 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 81 GKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 81 ~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
...+....++.+++..|++=|.-..+-|+... -+..++.|++..+..++.||.++
T Consensus 165 ~~~~~I~~ql~~a~~~A~~~G~aIaIGhp~p~-------------~~~Ti~aL~~~~~~l~~~gi~LV 219 (245)
T 2nly_A 165 SSRKEVIKNMRKLAKKAKQGSEPIGIGHVGVR-------------GDETYAGIRSMLDEFQAESIQLV 219 (245)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCEEEEECSTT-------------HHHHHHHHGGGHHHHHHTTEEEC
T ss_pred CCHHHHHHHHHHHHHHHhhcCcEEEEECCCCC-------------chhHHHHHHHHhhHHhhCCEEEE
Confidence 34456667888888899888877666665311 12467888888888888888876
No 372
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=51.78 E-value=65 Score=25.54 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=39.0
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
...++.+.++|.|.|.++...+....+...+.++++|-.+..+... ++++..+...+...+..+++...|..
T Consensus 81 ~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~--------s~~~~~~~~~~~~~~~a~~a~~~G~~ 152 (228)
T 3m47_A 81 EKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEM--------SHPGAEMFIQGAADEIARMGVDLGVK 152 (228)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCC--------CSGGGGTTHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeC--------CCccHHHHHHHHHHHHHHHHHHhCCc
Confidence 3356667777777777764432123455555566666554433221 01111111114456666777777766
Q ss_pred eEEe
Q psy13372 104 AIHI 107 (273)
Q Consensus 104 ~i~~ 107 (273)
-+++
T Consensus 153 GvV~ 156 (228)
T 3m47_A 153 NYVG 156 (228)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5543
No 373
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=51.40 E-value=1.2e+02 Score=26.15 Aligned_cols=96 Identities=13% Similarity=-0.005 Sum_probs=57.1
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCC---------CCC
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRT---------QPI 120 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~---------~~~ 120 (273)
+++.+++...+-.+..+..| +.-+..+.++++.++.-+++.+++-+...+.=+++...++ +|.
T Consensus 56 ~~i~~Il~g~d~rllvIaGP--------CSIed~e~aleyA~~Lk~~~~~~~d~l~iVmR~yfeKPRTs~GwKGli~dP~ 127 (370)
T 1of8_A 56 REAIDIITGKDDRVLVIVGP--------CSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTVGWKGLINDPD 127 (370)
T ss_dssp HHHHHHHTTSCCSEEEEEEC--------SCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSSSCCCTTTCTT
T ss_pred HHHHhhhcCCCCCeEEEEeC--------CcCCCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccccCCccccccccCCC
Confidence 45556655544444443322 3345567788999999999999887655444333322122 111
Q ss_pred --CCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 121 --ASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 121 --~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+-+. +.-.+.++++.....+.|+.++-|-+.+
T Consensus 128 ld~Sf~g-~~GL~i~r~ll~~v~e~GlPvaTEvld~ 162 (370)
T 1of8_A 128 VNNTFNI-NKGLQSARQLFVNLTNIGLPIGSEMLDT 162 (370)
T ss_dssp SSSCCCH-HHHHHHHHHHHHHHHTTTCCEEEECCSS
T ss_pred cCCCcCH-HHHHHHHHHHHHHHHHcCCceEEeecCc
Confidence 12222 5555666666655579999999998765
No 374
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=51.31 E-value=81 Score=26.84 Aligned_cols=103 Identities=11% Similarity=0.091 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCC-CCC-CCcchHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRT-QPI-ASEDPYT 127 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~-~~~-~~~~~~~ 127 (273)
++..+.+++.|+..+-+.+... .....+.-......++.+.++++.|.+.|...|.-.-...+.... .|. ..+...+
T Consensus 64 ~~di~~i~~~G~n~vRipv~w~-~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~~~~~~~~~~~~ 142 (380)
T 1edg_A 64 KQMIDAIKQKGFNTVRIPVSWH-PHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYFPSSQYMASSK 142 (380)
T ss_dssp HHHHHHHHHHTCCEEEECCCCG-GGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBCSSGGGHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccHH-hhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCCCCccccHHHHH
Confidence 4455556788888876643211 000000001123457899999999999999876442221111100 001 0233456
Q ss_pred HH-HHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 128 TL-KENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 128 ~~-~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
.+ .+.++++++..+.+.-.+++|.++
T Consensus 143 ~~~~~~w~~ia~~~~~~~~v~~~el~N 169 (380)
T 1edg_A 143 KYITSVWAQIAARFANYDEHLIFEGMN 169 (380)
T ss_dssp HHHHHHHHHHHHHTTTCCTTEEEECCS
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEecC
Confidence 66 777888888877776557787655
No 375
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=51.07 E-value=65 Score=27.78 Aligned_cols=105 Identities=8% Similarity=0.023 Sum_probs=56.9
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc-CCCe
Q psy13372 26 KYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL-NIPA 104 (273)
Q Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l-G~~~ 104 (273)
.+..+.+.|+++|.-.. ...+.+.+.+++.|+.........+... ......+..++... ++...+ |...
T Consensus 115 ~~~~~l~~GvTtv~d~~----~~~~~~~~~~~~~g~r~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~ 184 (447)
T 4f0r_A 115 AMGEMIRGGTTTINDMY----FYNAAVARAGLASGMRTFVGCSILEFPT---NYASNADDYIAKGM---AERSQFLGEDL 184 (447)
T ss_dssp HHHHHHHTTEEEEEECB----SCHHHHHHHHHHHTCEEEEEEEECSSCC---SSCSSHHHHHHHHH---HHHHTTTTCTT
T ss_pred HHHHHHhCCcEEEEEcc----cCHHHHHHHHHHcCCeEEEEchhcCCCc---ccccCHHHHHHHHH---HHHHHhcCCCc
Confidence 45567789999987542 3456677788889988764322211000 11122233333333 333332 4444
Q ss_pred EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 105 IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 105 i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+.+..+.... .....+.++++.+.|+++|+.+.++.
T Consensus 185 i~~~~~~~~~-----------~~~~~~~l~~~~~~A~~~g~~v~iH~ 220 (447)
T 4f0r_A 185 LTFTLAPHAP-----------YTVSDDTFRKVVTLAEQEDMLIHCHI 220 (447)
T ss_dssp EEEEEEECCG-----------GGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEEecCCC-----------CCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 5443211100 01113568888999999999999876
No 376
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=50.74 E-value=23 Score=25.70 Aligned_cols=45 Identities=24% Similarity=0.258 Sum_probs=32.9
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
.+.+.+.+.++|+..|++.........+...+.|...||.|..+.
T Consensus 65 a~~~~~~~~~~Gi~~v~V~vkG~G~Gre~airaL~~~Gl~I~~I~ 109 (129)
T 2vqe_K 65 ALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIV 109 (129)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESCCTTHHHHHHHHHTSSSEEEECE
T ss_pred HHHHHHHHHHhCCeEEEEEEECCCCCHHHHHHHHHHCCCEEEEEE
Confidence 466777889999999999864211345566666777899999875
No 377
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=50.71 E-value=1e+02 Score=25.22 Aligned_cols=56 Identities=16% Similarity=0.135 Sum_probs=37.2
Q ss_pred Cccccccccccccccc-------ccCHHHHHHHHHH-cCCCeEEecCC-CCCCCHHHHHHHHHHcC
Q psy13372 4 PSFKLAANLTLLFNDL-------AANYLDKYRVAAE-LGFRYIESWFP-PVGVTLEQLVAAQTRHG 60 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~-------~~~~~~~l~~~~~-~G~~~vEl~~~-~~~~~~~~~~~~l~~~g 60 (273)
-|+.+|++. |.+++. +.+-.+.|+.-++ -.|+.||++.. |..-..+.+.+..++..
T Consensus 12 ~~i~iG~sg-W~~~~W~G~fYP~~~~~~~~L~~Ya~~~~F~tVEiNsTFY~~p~~~t~~~W~~~tP 76 (273)
T 1vpq_A 12 HMVYVGTSG-FSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRKTP 76 (273)
T ss_dssp CEEEEEEBC-SCCSTTBTTTBCTTCCGGGHHHHHHHTSCCCEEEECCCSSSSSCHHHHHHHHTTSC
T ss_pred ceEEEECCC-CCCCCcCcccCCCCCCchHHHHHHhCCCCCCeEEECccccCCCCHHHHHHHHHhCC
Confidence 478899876 555552 1234567777766 25999999976 43345677777777643
No 378
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=50.63 E-value=1.1e+02 Score=25.58 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecC-CCCCCCCCCCCCCcchH
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMS-GKTESSRTQPIASEDPY 126 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~-G~~~~~~~~~~~~~~~~ 126 (273)
+.+++.+..++.|.-+.++++.. ++.++.+++.|++++++.|.-.+ |... +
T Consensus 4 ~~~~ll~~A~~~~yAV~AfNv~n----------------~e~~~Ail~AAee~~sPvIlq~s~g~~~------------y 55 (305)
T 1rvg_A 4 TGLEILKKAREEGYGVGAFNVNN----------------MEFLQAVLEAAEEQRSPVILALSEGAMK------------Y 55 (305)
T ss_dssp CHHHHHHHHHHHTCCEEEEECCS----------------HHHHHHHHHHHHHTTCCEEEEEEHHHHH------------H
T ss_pred CHHHHHHHHHHCCCEEEEEeeCC----------------HHHHHHHHHHHHHhCCCEEEECChhHHh------------h
Confidence 45778888889999999988631 46889999999999999876433 2110 1
Q ss_pred HHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccc
Q psy13372 127 TTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNA 192 (273)
Q Consensus 127 ~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~ 192 (273)
.-.+.+..++..+.+++|.++|+- . | ..+.+...+-+ +. ..=.+.+|-+|.
T Consensus 56 -~g~~~~~~~v~~~a~~~VPValHl-D---H----g~~~e~~~~ai---~~---GFtSVMiDgS~~ 106 (305)
T 1rvg_A 56 -GGRALTLMAVELAKEARVPVAVHL-D---H----GSSYESVLRAL---RA---GFTSVMIDKSHE 106 (305)
T ss_dssp -HHHHHHHHHHHHHHHCSSCEEEEE-E---E----ECSHHHHHHHH---HT---TCSEEEECCTTS
T ss_pred -CCHHHHHHHHHHHHhCCCcEEEEC-C---C----CCCHHHHHHHH---Hc---CCCeeeeCCCCC
Confidence 012334444444334999999996 1 2 23444444444 32 233566666654
No 379
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=50.63 E-value=29 Score=32.30 Aligned_cols=64 Identities=13% Similarity=-0.020 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
++.+++.|+..+..+.+.+++|.-.. ... +.|.-....--...+-+++++++|++.||++..|-
T Consensus 101 ~~~ik~~id~ma~~KlN~lh~Hl~D~~ei~-~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIPEI 165 (627)
T 2epl_X 101 LSSAKKMIEVLALMGYSTFELYMEDTYEIE-NQPYFGYFRGRYTVAELQEIEDYAADFDMSFVPCI 165 (627)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECSSCBCCT-TCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeecccccC-CCcccCccCCCcCHHHHHHHHHHHHHcCCEEEEee
Confidence 67899999999999999999986431 110 00110000011245668999999999999999995
No 380
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=50.22 E-value=18 Score=31.05 Aligned_cols=96 Identities=14% Similarity=0.073 Sum_probs=53.5
Q ss_pred HHHHHHHHHH-----HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCC-----CC
Q psy13372 88 ASLEKTIQYA-----CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQH-----SV 157 (273)
Q Consensus 88 ~~~~~~i~~a-----~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~-----~~ 157 (273)
+.+++.++.+ +.+|.+++++--|.....++..-+....-+++=+.|+.+++++++.|++++|-..+.. .+
T Consensus 26 ~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~~~~ 105 (362)
T 1uas_A 26 QIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCSNKM 105 (362)
T ss_dssp HHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSSS
T ss_pred HHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCccccCCC
Confidence 5677788888 8899999999766543111100000000011112588999999999999766432211 01
Q ss_pred CCcccCCHHHHHHHHHHHhhcCCCceeEee
Q psy13372 158 PGYYLSSFRVAERLIRELRAHGISNVQLQF 187 (273)
Q Consensus 158 ~~~~~~~~~~~~~li~~~~~~~~~~~g~~~ 187 (273)
|+. ....++..+++ .+.+-..|++-+
T Consensus 106 pg~-~~~~~~~~~~~---~~wGvdyvK~D~ 131 (362)
T 1uas_A 106 PGS-LDHEEQDVKTF---ASWGVDYLKYDN 131 (362)
T ss_dssp BCC-TTCHHHHHHHH---HHHTCCEEEEEC
T ss_pred CCc-hhHHHHHHHHH---HHcCCCEEEECc
Confidence 222 23345566666 776656555443
No 381
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=50.19 E-value=74 Score=25.41 Aligned_cols=105 Identities=15% Similarity=0.026 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
.+.++.+...++|+|=+..... .....+.+.+.|+.++.+...... .+. .-...+..+..+.+.+.....|.+
T Consensus 54 ~~~~~~l~~~~vdgiIi~~~~~---~~~~~~~~~~~~iPvV~~~~~~~~-~~~---~~V~~D~~~~g~~a~~~L~~~G~~ 126 (291)
T 3egc_A 54 REAVGQFFERRVDGLILAPSEG---EHDYLRTELPKTFPIVAVNRELRI-PGC---GAVLSENVRGARTAVEYLIARGHT 126 (291)
T ss_dssp HHHHHHHHHTTCSEEEECCCSS---CCHHHHHSSCTTSCEEEESSCCCC-TTC---EEEEECHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHCCCCEEEEeCCCC---ChHHHHHhhccCCCEEEEecccCC-CCC---CEEEECcHHHHHHHHHHHHHcCCC
Confidence 3355666667777776653321 223445566778888877653220 111 111111223445566666667999
Q ss_pred eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 104 AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 104 ~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
.|.+..|.... ....++++-..+..+++|+.+
T Consensus 127 ~i~~i~~~~~~------------~~~~~R~~gf~~~l~~~g~~~ 158 (291)
T 3egc_A 127 RIGAIVGSAGL------------MTSRERLKGFRAAMSAAGLPV 158 (291)
T ss_dssp SEEEECSCTTS------------HHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEEeCCCCC------------cCHHHHHHHHHHHHHHcCCCC
Confidence 99887654311 123344445555666677654
No 382
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=50.18 E-value=96 Score=24.74 Aligned_cols=82 Identities=11% Similarity=-0.032 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC-
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI- 102 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~- 102 (273)
.+.++.+...++|+|=+..... .....+.+.+.+.|+.++.+..........+ -...+..+..+.+.+.....|.
T Consensus 59 ~~~i~~l~~~~vdgiii~~~~~-~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~---~V~~D~~~~g~~a~~~l~~~g~~ 134 (304)
T 3gbv_A 59 VATSQAVIEEQPDGVMFAPTVP-QYTKGFTDALNELGIPYIYIDSQIKDAPPLA---FFGQNSHQSGYFAARMLMLLAVN 134 (304)
T ss_dssp HHHHHHHHTTCCSEEEECCSSG-GGTHHHHHHHHHHTCCEEEESSCCTTSCCSE---EEECCHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHhcCCCEEEECCCCh-HHHHHHHHHHHHCCCeEEEEeCCCCCCCceE---EEecChHHHHHHHHHHHHHHhCC
Confidence 4456667778888887764322 2234555667788999998875432110010 0111112345556666667777
Q ss_pred -CeEEecC
Q psy13372 103 -PAIHIMS 109 (273)
Q Consensus 103 -~~i~~~~ 109 (273)
+.|.+..
T Consensus 135 ~~~i~~i~ 142 (304)
T 3gbv_A 135 DREIVIFR 142 (304)
T ss_dssp CSEEEEEE
T ss_pred CCeEEEEE
Confidence 8887765
No 383
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=50.15 E-value=95 Score=24.69 Aligned_cols=109 Identities=13% Similarity=0.062 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCC-CCchhHHHHHHHHHHHHHHHHH-c-C
Q psy13372 25 DKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYA-AVKGKESEFRASLEKTIQYACA-L-N 101 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~a~~-l-G 101 (273)
+.++.+.+.++|+|=+..... .......+.+.+.|+.++.+..........+ ...+.. +..+.+.+.... + |
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~~-~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~----~~g~~~~~~l~~~~~g 129 (293)
T 3l6u_A 55 EQILEFVHLKVDAIFITTLDD-VYIGSAIEEAKKAGIPVFAIDRMIRSDAVVSSITSNNQ----MIGEQLASYIKNELIK 129 (293)
T ss_dssp HHHHHHHHTTCSEEEEECSCT-TTTHHHHHHHHHTTCCEEEESSCCCCTTCSEEEEECHH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCCh-HHHHHHHHHHHHcCCCEEEecCCCCCCcceeEEecCHH----HHHHHHHHHHHHHhcc
Confidence 456666677888887754322 3334555667788999998865432100010 011122 223334444444 5 6
Q ss_pred CC-----eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEEEc
Q psy13372 102 IP-----AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTALIE 150 (273)
Q Consensus 102 ~~-----~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~lE 150 (273)
.+ .|.+..|.... ....++++-..+..+++ |+.+..+
T Consensus 130 ~~~~~~~~i~~i~g~~~~------------~~~~~R~~gf~~~l~~~~g~~~~~~ 172 (293)
T 3l6u_A 130 QTGRSTGRIVEITGTANV------------YTTNERHRGFLKGIENEPTLSIVDS 172 (293)
T ss_dssp HHSCSCEEEEEEECSTTC------------HHHHHHHHHHHHHHTTCTTEEEEEE
T ss_pred CCCCCCceEEEEECCCCC------------chHHHHHHHHHHHHHhCCCcEEeee
Confidence 55 77766553211 12334455555666777 8887544
No 384
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=49.99 E-value=1e+02 Score=26.26 Aligned_cols=106 Identities=12% Similarity=0.107 Sum_probs=61.0
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEe-cCCCCC---CCCC--CCCCC
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHI-MSGKTE---SSRT--QPIAS 122 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~-~~G~~~---~~~~--~~~~~ 122 (273)
.++..+.+++.|+..+-+.+...........-......++.+.++++.|.+.|...|.- |..... ..+. .+...
T Consensus 71 ~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~~~~~~g~w~~~~~~~~ 150 (395)
T 2jep_A 71 TPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDGYNSVQGGWLLVNGGNQ 150 (395)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGGCTTSTTCCCCTTCSCH
T ss_pred cHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCccccCCCCccccCCcccH
Confidence 35556667899999887654211001000000122456789999999999999997744 321110 0110 00001
Q ss_pred cchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 123 EDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 123 ~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+...+.+.+.++++++..+.+.-.+++|.++-
T Consensus 151 ~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NE 182 (395)
T 2jep_A 151 TAIKEKYKKVWQQIATKFSNYNDRLIFESMNE 182 (395)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCTTEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEeecC
Confidence 23456777888888888777665568887653
No 385
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Probab=49.78 E-value=20 Score=30.65 Aligned_cols=39 Identities=13% Similarity=0.066 Sum_probs=29.2
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC-CC-------HHHHHHHHHHcCC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG-VT-------LEQLVAAQTRHGL 61 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~-~~-------~~~~~~~l~~~gL 61 (273)
...+++.+++.|||||+|.+.+.. .+ ++++++.+++.+.
T Consensus 99 i~si~~~~~~~~fDGiDiDwE~p~~~d~~~~~~ll~eLr~~l~~~~~ 145 (361)
T 2pi6_A 99 IKSVPPFLRTHGFDGLDLAWLYPGRRDKRHLTTLVKEMKAEFIREAQ 145 (361)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCCCGGGHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCeEEEeeecCCchHHHHHHHHHHHHHHHHhhhhc
Confidence 355678899999999999976431 12 4788888888776
No 386
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=49.71 E-value=98 Score=24.71 Aligned_cols=44 Identities=14% Similarity=-0.103 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-----CCCCHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-----VGVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-----~~~~~~~~~~~l~~~gL~i~~ 65 (273)
++.+.++.+.+.|.+.|++.-+. .....+.++++.+..++.+..
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~ 79 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIA 79 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEE
Confidence 78899999999999999997431 123467777777777777665
No 387
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=49.39 E-value=1.2e+02 Score=26.28 Aligned_cols=43 Identities=16% Similarity=0.060 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCCeEEecC--C----C--C---CCCHHHHHHHHHHcCCeeEE
Q psy13372 23 YLDKYRVAAELGFRYIESWF--P----P--V---GVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~--~----~--~---~~~~~~~~~~l~~~gL~i~~ 65 (273)
..+.++.++++|.+.|=+.. | + . ....+.+++..++.||.+.+
T Consensus 158 a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 158 VAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 34556678899999996653 1 1 1 12357778888899999886
No 388
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=49.34 E-value=27 Score=31.61 Aligned_cols=41 Identities=15% Similarity=0.162 Sum_probs=32.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLK 62 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~ 62 (273)
+.++.++++.+.|+|.|-+.+.....++.++++.++++|-.
T Consensus 218 D~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~ 258 (520)
T 3khd_A 218 DKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRH 258 (520)
T ss_dssp HHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCC
Confidence 44555588999999999999875556788999999887743
No 389
>3c8n_A Probable F420-dependent glucose-6-phosphate dehyd FGD1; TIM barrel, non-prolyl CIS-peptide, oxidoreductase; 1.90A {Mycobacterium tuberculosis} PDB: 3b4y_A
Probab=49.18 E-value=8 Score=33.08 Aligned_cols=37 Identities=11% Similarity=0.103 Sum_probs=22.8
Q ss_pred CCccccccccccccccc-ccCHHHHHHHHHHcCCCeEEec
Q psy13372 3 APSFKLAANLTLLFNDL-AANYLDKYRVAAELGFRYIESW 41 (273)
Q Consensus 3 ~~~~k~~~~~~~~~~~~-~~~~~~~l~~~~~~G~~~vEl~ 41 (273)
|+|||||+.... ... ...+.+..+.+.++||+.+=+.
T Consensus 21 m~~m~~G~~~~~--~~~~~~~~~~~A~~AE~~Gfd~~w~~ 58 (356)
T 3c8n_A 21 MAELKLGYKASA--EQFAPRELVELAVAAEAHGMDSATVS 58 (356)
T ss_dssp --CCEEEEEECT--TTSCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred cceEEEEEecCC--CcCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 568999986532 111 1134556667788999998664
No 390
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=49.09 E-value=19 Score=25.58 Aligned_cols=44 Identities=18% Similarity=0.158 Sum_probs=30.5
Q ss_pred HHHHHHHHHHcCCCeEEecCC-CCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 23 YLDKYRVAAELGFRYIESWFP-PVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
-+++.+.+.++|+..|++... .+ ...+...+.|...||.|..+.
T Consensus 55 a~~~~~~~~~~Gi~~v~v~vkG~G-~Gr~~airaL~~~Gl~I~~I~ 99 (117)
T 3r8n_K 55 AERCADAVKEYGIKNLEVMVKGPG-PGRESTIRALNAAGFRITNIT 99 (117)
T ss_dssp HHHHHHHHTTSCCCEEEEEEECSS-SSTTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCcEEEEEEeCCC-ccHHHHHHHHHhCCCEEEEEE
Confidence 356677788999999999863 22 222333444578899999875
No 391
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=49.03 E-value=85 Score=25.78 Aligned_cols=82 Identities=10% Similarity=0.040 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-------CCCC-------HHHHHHHHHHcCCeeEEEecCCc----------------
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-------VGVT-------LEQLVAAQTRHGLKQVLINTEVD---------------- 71 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-------~~~~-------~~~~~~~l~~~gL~i~~~~~~~~---------------- 71 (273)
..+++++.+.+.-=+.|-+.-.. ...+ ++.+.+.+++.|+.++.|--|..
T Consensus 103 ~t~emi~ial~~kP~~vtLVPEkreE~TTegGlDv~~~~~~L~~~i~~L~~~GIrVSLFIDpd~~qI~aA~~~GAd~IEL 182 (278)
T 3gk0_A 103 VTPEMLDIACEIRPHDACLVPEKRSELTTEGGLDVVGHFDAVRAACKQLADAGVRVSLFIDPDEAQIRAAHETGAPVIEL 182 (278)
T ss_dssp SSHHHHHHHHHHCCSEEEECCCSGGGBCSSSSBCTTTTHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCcCCCcchhhhccHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEE
Confidence 56788888888888888776321 0111 35556667888888776543320
Q ss_pred --cccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 72 --ENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 72 --~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
+.+.-+.+++.++..++.+..+.+.|..+|-.
T Consensus 183 hTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~ 216 (278)
T 3gk0_A 183 HTGRYADAHDAAEQQREFERIATGVDAGIALGLK 216 (278)
T ss_dssp CCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred ecchhhccCCchhHHHHHHHHHHHHHHHHHcCCE
Confidence 11111123445666788889999999998854
No 392
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=48.97 E-value=1.1e+02 Score=24.93 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=30.1
Q ss_pred HHHHHHHHHHcCCCeEEecCC------CC-----CCCHHHHHHHHHHcCCeeEE
Q psy13372 23 YLDKYRVAAELGFRYIESWFP------PV-----GVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~------~~-----~~~~~~~~~~l~~~gL~i~~ 65 (273)
..+.++.++++|.+.|-.... |. ....+.+++..++.||.+.+
T Consensus 39 a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~t 92 (262)
T 1zco_A 39 IMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEYGLVTVT 92 (262)
T ss_dssp HHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHcCCcEEE
Confidence 445566778999998876632 11 12357888889999999886
No 393
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=48.88 E-value=7.9 Score=34.18 Aligned_cols=22 Identities=27% Similarity=0.271 Sum_probs=0.0
Q ss_pred cCHHHHHHHHHHcCCCeEEecC
Q psy13372 21 ANYLDKYRVAAELGFRYIESWF 42 (273)
Q Consensus 21 ~~~~~~l~~~~~~G~~~vEl~~ 42 (273)
.++.++.+.+.++|||+|||+.
T Consensus 170 ~~F~~AA~rA~~AGfDgVEIH~ 191 (419)
T 3l5a_A 170 QQYRDATLRAIKAGFDGVEISI 191 (419)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEECC
No 394
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=48.86 E-value=95 Score=24.30 Aligned_cols=155 Identities=11% Similarity=0.026 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+..+.++.+.+.|++.||+..... ...+.++++.++++=-+...++. + +. ..++.|...|
T Consensus 29 ~~~~~~~al~~gGv~~iel~~k~~-~~~~~i~~l~~~~~~~~vgagtv------i--~~-----------d~~~~A~~aG 88 (214)
T 1wbh_A 29 HAVPMAKALVAGGVRVLNVTLRTE-CAVDAIRAIAKEVPEAIVGAGTV------L--NP-----------QQLAEVTEAG 88 (214)
T ss_dssp GHHHHHHHHHHTTCCEEEEESCST-THHHHHHHHHHHCTTSEEEEESC------C--SH-----------HHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCh-hHHHHHHHHHHHCcCCEEeeCEE------E--EH-----------HHHHHHHHcC
Confidence 566778888899999999997533 34556666667764212222221 1 11 3456777789
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCC
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS 181 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~ 181 (273)
+..++.+ .. + ..+.+.++.+|+.+.+- +.|+.++.+.. +.+.+
T Consensus 89 Ad~v~~p--~~--d------------------~~v~~~~~~~g~~~i~G-----------~~t~~e~~~A~----~~Gad 131 (214)
T 1wbh_A 89 AQFAISP--GL--T------------------EPLLKAATEGTIPLIPG-----------ISTVSELMLGM----DYGLK 131 (214)
T ss_dssp CSCEEES--SC--C------------------HHHHHHHHHSSSCEEEE-----------ESSHHHHHHHH----HTTCC
T ss_pred CCEEEcC--CC--C------------------HHHHHHHHHhCCCEEEe-----------cCCHHHHHHHH----HCCCC
Confidence 9999753 11 1 14567777888766532 34677776655 45667
Q ss_pred ceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceE
Q psy13372 182 NVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYV 248 (273)
Q Consensus 182 ~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~ 248 (273)
.+++ +.....++ .+.++.+...+.++.+.= . |-|+...+-+.+..-|..+..
T Consensus 132 ~v~~----Fpa~~~gG--~~~lk~i~~~~~~ipvva--------i-GGI~~~n~~~~l~agg~~~v~ 183 (214)
T 1wbh_A 132 EFKF----FPAEANGG--VKALQAIAGPFSQVRFCP--------T-GGISPANYRDYLALKSVLCIG 183 (214)
T ss_dssp EEEE----TTTTTTTH--HHHHHHHHTTCTTCEEEE--------B-SSCCTTTHHHHHTSTTBSCEE
T ss_pred EEEE----ecCccccC--HHHHHHHhhhCCCCeEEE--------E-CCCCHHHHHHHHhcCCCeEEE
Confidence 7888 22211111 344555443332333322 2 556665555555543655544
No 395
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=48.75 E-value=1.2e+02 Score=25.30 Aligned_cols=137 Identities=12% Similarity=0.124 Sum_probs=76.4
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCc--EEEEccCCCCCCCCcccC
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSL--TALIEPVNQHSVPGYYLS 163 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv--~i~lE~~~~~~~~~~~~~ 163 (273)
..+.+.+.++.+...|++.|.+..|.+ .- .. .+.++++.+++.+. .+.+.+- +..+
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGGEP-ll------~~--------~l~~li~~~~~~~~~~~i~i~TN------G~ll- 108 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGGEP-LM------RR--------DLDVLIAKLNQIDGIEDIGLTTN------GLLL- 108 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESSCG-GG------ST--------THHHHHHHHTTCTTCCEEEEEEC------STTH-
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCc-cc------hh--------hHHHHHHHHHhCCCCCeEEEEeC------ccch-
Confidence 346777888888889999988854322 11 11 13466666776654 7888762 2232
Q ss_pred CHHHHHHHHHHHhhcCCCceeEeeeccccc-----ccCC-ChHHH---HHhcCCcceeEEeccCCCCCCCCCCCcccHHH
Q psy13372 164 SFRVAERLIRELRAHGISNVQLQFDFFNAQ-----RICG-DLTHT---FGACRDLIGHVQIAQAPDRQEPHARGEIDYAY 234 (273)
Q Consensus 164 ~~~~~~~li~~~~~~~~~~~g~~~D~~h~~-----~~~~-~~~~~---i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~ 234 (273)
.+.++.+ .+.+-..+.+.+|..+-. .... ++... ++.+...=..+.+.-. ..+|. -.-++..
T Consensus 109 --~~~~~~L---~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v~i~~v---v~~g~-n~~ei~~ 179 (340)
T 1tv8_A 109 --KKHGQKL---YDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVV---IQKGI-NDDQIIP 179 (340)
T ss_dssp --HHHHHHH---HHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEEEEEEE---ECTTT-TGGGHHH
T ss_pred --HHHHHHH---HHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCEEEEEE---EeCCC-CHHHHHH
Confidence 2233333 565556799999986421 1222 34433 3333221112222211 12333 3347889
Q ss_pred HHHHHHHcCCCceEEEeeec
Q psy13372 235 VFELLAREGYEGYVGLEYKP 254 (273)
Q Consensus 235 i~~~L~~~gy~g~~~lE~~~ 254 (273)
+++.+++.|.+ ...+|+.|
T Consensus 180 ~~~~~~~~g~~-~~~i~~~p 198 (340)
T 1tv8_A 180 MLEYFKDKHIE-IRFIEFMD 198 (340)
T ss_dssp HHHHHHHTTCC-EEEEECCC
T ss_pred HHHHHHhcCCe-EEEEEeeE
Confidence 99999999987 44556654
No 396
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=48.73 E-value=47 Score=27.34 Aligned_cols=60 Identities=15% Similarity=-0.006 Sum_probs=38.6
Q ss_pred cccccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeE
Q psy13372 5 SFKLAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQV 64 (273)
Q Consensus 5 ~~k~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~ 64 (273)
||++-+++=+.+.+-..++++.++.+++.|++.|=+.-=..-....++.+..++.|+.+.
T Consensus 1 M~~~DLH~Ht~~SDg~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~gi~vi 60 (292)
T 2yb1_A 1 MANIDLHFHSRTSDGALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARRGIPFL 60 (292)
T ss_dssp -CCEECCBCCTTTTCSSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHTTCCEE
T ss_pred CCccccccCCCccCCCCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHcCCEEE
Confidence 344444332233342348999999999999999999732111345667777778898875
No 397
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=48.59 E-value=85 Score=25.28 Aligned_cols=83 Identities=12% Similarity=0.125 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCCC-------CCCC-------HHHHHHHHHHcCCeeEEEecCCc----------------
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPP-------VGVT-------LEQLVAAQTRHGLKQVLINTEVD---------------- 71 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~-------~~~~-------~~~~~~~l~~~gL~i~~~~~~~~---------------- 71 (273)
+.+++++.+.+.-=+.|-+.-.. ...+ +..+.+.+++.|+.++.|--+..
T Consensus 75 ~t~emi~ia~~~kP~~vtLVPE~r~e~TTegGldv~~~~~~l~~~i~~L~~~GIrVSLFIDpd~~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 75 VTEEMLAIAVETKPHFCCLVPEKRQEVTTEGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp SSHHHHHHHHHHCCSEEEECCCCSSCSSCCSCCCSGGGHHHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHcCCCEEEECCCCCCCcCCCcchhHHhhHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCcCEEEE
Confidence 56788888888888888776321 0122 35666677788888776543211
Q ss_pred --cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCe
Q psy13372 72 --ENFGYAAVKGKESEFRASLEKTIQYACALNIPA 104 (273)
Q Consensus 72 --~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 104 (273)
+.+.-+..+..++..++.+..+.+.|..+|-..
T Consensus 155 hTG~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~V 189 (243)
T 1m5w_A 155 HTGCYADAKTDAEQAQELARIAKAATFAASLGLKV 189 (243)
T ss_dssp ECHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred echhhhcCCCchhHHHHHHHHHHHHHHHHHcCCEE
Confidence 111111233445567889999999999999653
No 398
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=48.50 E-value=48 Score=27.32 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE------------------
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI------------------ 149 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l------------------ 149 (273)
+.+.+....|.+.||..+++|.=... +. |....+.+..+++.+++-++ ++.|.+
T Consensus 30 eEia~~A~~~~~AGAaivHlHvRd~~-G~--~s~d~~~~~e~~~~IR~~~p-----d~ii~~Ttg~~~~~~e~R~~~~~~ 101 (275)
T 3no5_A 30 SEQVESTQAAFEAGATLVHLHVRNDD-ET--PTSNPDRFALVLEGIRKHAP-----GMITQVSTGGRSGAGNERGAMLSL 101 (275)
T ss_dssp HHHHHHHHHHHHHTCCEEEECEECTT-SC--EECCHHHHHHHHHHHHHHST-----TCEEEECCCCCTTCCGGGGTTGGG
T ss_pred HHHHHHHHHHHHccCcEEEEeecCCC-CC--cCCCHHHHHHHHHHHHHhCC-----CeEEEeCCCCCCCCHHHHhhHhhc
Confidence 34555566677789999999863322 21 11133456666666666441 222221
Q ss_pred -----------ccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccc
Q psy13372 150 -----------EPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQR 194 (273)
Q Consensus 150 -----------E~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~ 194 (273)
.|.. ...|.++++.+.++++.+.+.+-.-=--|||++|...
T Consensus 102 ~Pe~aSl~~gs~Nf~----~~v~~N~~~~~~~~~~~~~e~Gi~pE~e~fd~g~l~~ 153 (275)
T 3no5_A 102 RPDMASLATGSVNFP----TRVYDNPPELVDWLAAEMKTYGIKPEVEAFDLSMIFQ 153 (275)
T ss_dssp CCSEEEEECSCEECS----SSEECCCHHHHHHHHHHHHHTTCEEEEEESSTHHHHH
T ss_pred CCCEEEecCcccccc----cccccCCHHHHHHHHHHHHHcCCeeEEEEEcHHHHHH
Confidence 1211 2345677888888885555554333345778887653
No 399
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=48.37 E-value=26 Score=31.16 Aligned_cols=75 Identities=15% Similarity=-0.025 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
.+.+.|+.++++|+++|+|.-.+..... ..+|-.+..+..+..+...-..+|.- -..+.+++.++.|++.|
T Consensus 24 gi~~~LdyL~~LGvt~I~l~Pi~~~~~~-------~~~GY~~~dy~~~~~~~~~~~idp~~--Gt~~df~~lv~~aH~~G 94 (480)
T 1ud2_A 24 RLHDDAAALSDAGITAIWIPPAYKGNSQ-------ADVGYGAYDLYDLGEFNQKGTVRTKY--GTKAQLERAIGSLKSND 94 (480)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSEESST-------TCCSSSEEETTCSSCSCBTTBSSCSS--CCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEeCCcccCCCC-------CCCCcCccchhhcccccccCccCCCC--CCHHHHHHHHHHHHHCC
Confidence 4678899999999999999854431111 23555555432110000000011110 01468899999999999
Q ss_pred CCeE
Q psy13372 102 IPAI 105 (273)
Q Consensus 102 ~~~i 105 (273)
.+.|
T Consensus 95 i~Vi 98 (480)
T 1ud2_A 95 INVY 98 (480)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9875
No 400
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=48.34 E-value=98 Score=24.72 Aligned_cols=124 Identities=14% Similarity=0.080 Sum_probs=69.3
Q ss_pred HHHHHHcCCCeEEecCCCC-----CC--CHHHHHHHHHHc-CCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHH
Q psy13372 27 YRVAAELGFRYIESWFPPV-----GV--TLEQLVAAQTRH-GLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 27 l~~~~~~G~~~vEl~~~~~-----~~--~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
.+.+-+.|.|.|++..+.. .+ -.+++++..+.. |..+-.+ . +.+.-.+ ...-+.+.+++++|.
T Consensus 86 ~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~~~lKvI-i----Et~~L~~----~~t~eei~~a~~ia~ 156 (231)
T 3ndo_A 86 AELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRAATLKVI-V----ESAALLE----FSGEPLLADVCRVAR 156 (231)
T ss_dssp HHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEE-C----CHHHHHH----HTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccCCceEEE-E----ECcccCC----CCCHHHHHHHHHHHH
Confidence 4456788999999998732 11 124444444443 3322222 1 1111000 012367889999999
Q ss_pred HcCCCeEEecCCCC-CCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhh
Q psy13372 99 ALNIPAIHIMSGKT-ESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRA 177 (273)
Q Consensus 99 ~lG~~~i~~~~G~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~ 177 (273)
..|+.+|.+-+|.. ...- +. .-++.+++.+. .+.||+.+ .+ +.|.+++++++ +
T Consensus 157 ~aGADfVKTSTGf~~~~gA-----t~----edv~lm~~~v~--~~v~VKaa---------GG--Irt~~~a~~~i---~- 210 (231)
T 3ndo_A 157 DAGADFVKTSTGFHPSGGA-----SV----QAVEIMARTVG--ERLGVKAS---------GG--IRTAEQAAAML---D- 210 (231)
T ss_dssp HTTCSEEECCCSCCTTCSC-----CH----HHHHHHHHHHT--TTSEEEEE---------SS--CCSHHHHHHHH---H-
T ss_pred HHCcCEEEcCCCCCCCCCC-----CH----HHHHHHHHHhC--CCceEEEe---------CC--CCCHHHHHHHH---H-
Confidence 99999999988764 2221 11 23344444432 34444544 22 67889999999 4
Q ss_pred cCCCceeE
Q psy13372 178 HGISNVQL 185 (273)
Q Consensus 178 ~~~~~~g~ 185 (273)
.+...+|.
T Consensus 211 aGa~RiGt 218 (231)
T 3ndo_A 211 AGATRLGL 218 (231)
T ss_dssp TTCSEEEE
T ss_pred hcchhccc
Confidence 44455664
No 401
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=48.21 E-value=1.1e+02 Score=24.79 Aligned_cols=45 Identities=18% Similarity=0.174 Sum_probs=34.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
..+..++.+++.|.++|-+..-.. .....+.+.++++|+....+.
T Consensus 110 g~~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~~i~l~ 154 (268)
T 1qop_A 110 GIDAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIAPIFIC 154 (268)
T ss_dssp CHHHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCEEECEE
T ss_pred hHHHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCcEEEEE
Confidence 568899999999999988753211 346788899999999876443
No 402
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=48.06 E-value=41 Score=28.20 Aligned_cols=50 Identities=12% Similarity=0.100 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCeEE--ecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 93 TIQYACALNIPAIH--IMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 93 ~i~~a~~lG~~~i~--~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
.++.|.+||+..+. ++.. .+. + ......+.+.++.+.|+++|+.+.+||+
T Consensus 133 sVe~AvrlGADaV~~l~~i~-~Gs--------~-~e~~~l~~la~vv~ea~~~GlP~~~ep~ 184 (307)
T 3fok_A 133 NVSSMVDRGVDFAKTLVRIN-LSD--------A-GTAPTLEATAHAVNEAAAAQLPIMLEPF 184 (307)
T ss_dssp CHHHHHHHTCCEEEEEEEEC-TTC--------T-THHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CHHHHHHCCCCEEEEEEEEC-CCC--------h-hHHHHHHHHHHHHHHHHHcCCcEEEEee
Confidence 56666778999976 3322 111 1 1267888999999999999999999973
No 403
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=48.05 E-value=30 Score=30.59 Aligned_cols=43 Identities=16% Similarity=0.126 Sum_probs=29.9
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC------CC-------HHHHHHHHHH-------cCCeeEE
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG------VT-------LEQLVAAQTR-------HGLKQVL 65 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~------~~-------~~~~~~~l~~-------~gL~i~~ 65 (273)
...+++++++.|||||+|.+.+.. .+ ++++++.+++ .++.++.
T Consensus 99 i~siv~~l~~~gfDGiDiDwEyP~~~g~~~~d~~nf~~ll~eLr~~l~~~~~~~~~~~~~Ls~ 161 (445)
T 1wb0_A 99 VNSAIRFLRKYSFDGLDLDWEYPGSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSA 161 (445)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCTTSTTCCTTHHHHHHHHHHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred HHHHHHHHHHcCCCeEEEeCccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhccCCCceEEEE
Confidence 355678899999999999975421 11 3677887773 5666664
No 404
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=48.00 E-value=34 Score=27.70 Aligned_cols=140 Identities=13% Similarity=0.025 Sum_probs=73.0
Q ss_pred HHHHHHHcCCCeE--EecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCC--CcccCCHHHH
Q psy13372 93 TIQYACALNIPAI--HIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVP--GYYLSSFRVA 168 (273)
Q Consensus 93 ~i~~a~~lG~~~i--~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~--~~~~~~~~~~ 168 (273)
.++.|...|+..| .+..|.. ..+...+.++++.+.++++|+.+.+|......|- +.-..+.+++
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~------------~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~ 171 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSD------------EDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHA 171 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETST------------THHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEecCCC------------CHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHH
Confidence 4555667899999 5444422 2346667888899999999999888863111010 0001223343
Q ss_pred HHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHH---HHHHHHcCCC
Q psy13372 169 ERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYV---FELLAREGYE 245 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i---~~~L~~~gy~ 245 (273)
.+.. .+.+...+++.+ ..++ +.++++...+ .+-+.=. -|- +.-+...+ ++.+.+.|.+
T Consensus 172 a~~a---~~~Gad~i~~~~--------~~~~-~~l~~i~~~~-~ipvva~-----GGi-~~~~~~~~~~~~~~~~~~Ga~ 232 (273)
T 2qjg_A 172 ARLG---AELGADIVKTSY--------TGDI-DSFRDVVKGC-PAPVVVA-----GGP-KTNTDEEFLQMIKDAMEAGAA 232 (273)
T ss_dssp HHHH---HHTTCSEEEECC--------CSSH-HHHHHHHHHC-SSCEEEE-----CCS-CCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHH---HHcCCCEEEECC--------CCCH-HHHHHHHHhC-CCCEEEE-----eCC-CCCCHHHHHHHHHHHHHcCCc
Confidence 3555 777766677653 1232 3333332211 0001000 011 21134454 4444578999
Q ss_pred ceEEEe-eecCCChHHHHH
Q psy13372 246 GYVGLE-YKPQGNTKEGLE 263 (273)
Q Consensus 246 g~~~lE-~~~~~~~~~~~~ 263 (273)
|..+.. +....++.+.++
T Consensus 233 gv~vg~~i~~~~~~~~~~~ 251 (273)
T 2qjg_A 233 GVAVGRNIFQHDDVVGITR 251 (273)
T ss_dssp EEECCHHHHTSSSHHHHHH
T ss_pred EEEeeHHhhCCCCHHHHHH
Confidence 887654 334556776666
No 405
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=47.99 E-value=33 Score=29.83 Aligned_cols=36 Identities=11% Similarity=0.077 Sum_probs=26.1
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCC--C-------HHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGV--T-------LEQLVAAQTR 58 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~--~-------~~~~~~~l~~ 58 (273)
...+++.+++.|||||+|.+.+... + ++++++.+++
T Consensus 134 i~siv~~l~~~gfDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~ 178 (406)
T 3g6m_A 134 AKTAVEFMKDWGFDGIDVDWEYPASETDANNMVLLLQRVRQELDS 178 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEEECCCccchhhHHHHHHHHHHHHHHH
Confidence 3456888999999999999865311 1 3677777765
No 406
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=47.86 E-value=30 Score=26.96 Aligned_cols=60 Identities=15% Similarity=0.068 Sum_probs=39.0
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.++.|++.||+- -+..+.--.++++.+..++.| |+++|+|... .-+.++-=|+ .+.
T Consensus 44 ~A~~ViIVPGYG-----------mAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGhMNVLL---AEA 101 (207)
T 1djl_A 44 EANSIIITPGYG-----------LCAAKAQYPIADLVKMLTEQGKKVRFGIHPVAG--------RMPGQLNVLL---AEA 101 (207)
T ss_dssp HCSEEEEEECHH-----------HHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTTHHHHHH---HHT
T ss_pred hCCeEEEECCch-----------HHHHHHhHHHHHHHHHHHHCCCeEEEEeCccCC--------CCCCCCcEEE---EEe
Confidence 467888888752 233444556788888888888 5789999652 2244555566 666
Q ss_pred CCCc
Q psy13372 179 GISN 182 (273)
Q Consensus 179 ~~~~ 182 (273)
+-|+
T Consensus 102 ~VPY 105 (207)
T 1djl_A 102 GVPY 105 (207)
T ss_dssp TCCG
T ss_pred CCCH
Confidence 5553
No 407
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=47.82 E-value=1.2e+02 Score=25.03 Aligned_cols=124 Identities=15% Similarity=0.019 Sum_probs=76.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCC--CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP--PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~--~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
++++.++.+.++|++..=+..+ +. .+.+.+.+.+++++=.+..+.. . ++... .+.++ ....
T Consensus 55 ~~e~l~~~m~~~GI~~~Vlvq~~~~~-~dN~~ll~~l~~~~~r~~Gva~-v--------dp~~~---~~eL~----~l~~ 117 (303)
T 4d9a_A 55 GPDMLFALRDHLGFARNVIVQASCHG-TDNAATLDAIARAQGKARGIAV-V--------DPAID---EAELA----ALHE 117 (303)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCGGGT-TCCHHHHHHHHHTTTSEEEEEC-C--------CTTCC---HHHHH----HHHH
T ss_pred CHHHHHHHHHHcCCCeEEEecccccc-ccHHHHHHHHHhCCCcEEEEEE-e--------CCCCC---HHHHH----HHHH
Confidence 8999999999999997666543 23 4456677777888766665542 1 11111 12333 3345
Q ss_pred cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcC
Q psy13372 100 LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHG 179 (273)
Q Consensus 100 lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~ 179 (273)
.|.+-|++.+....... . .-+.+..+.+.+++ |+.+.+..- .....++.+++ +++
T Consensus 118 ~G~rGvR~~~~~~~~~~-----~------~~~~~~~~~~~l~~-gl~v~l~~~---------~~~l~~l~~~~---~~~- 172 (303)
T 4d9a_A 118 GGMRGIRFNFLKRLVDD-----A------PKDKFLEVAGRLPA-GWHVVIYFE---------ADILEELRPFM---DAI- 172 (303)
T ss_dssp TTEEEEEEECCTTTCSC-----C------CHHHHHHHHTSCCT-TCEEEEECC---------GGGHHHHHHHH---HHC-
T ss_pred CCCCEEEeecccCCccc-----c------CHHHHHHHHHHHhc-CCEEEEecc---------cccHHHHHHHH---HHC-
Confidence 69998888764321110 0 11346677777778 988887752 23466777788 776
Q ss_pred CCceeEeeec
Q psy13372 180 ISNVQLQFDF 189 (273)
Q Consensus 180 ~~~~g~~~D~ 189 (273)
.+.+++|=
T Consensus 173 --~~~iVidH 180 (303)
T 4d9a_A 173 --PVPIVIDH 180 (303)
T ss_dssp --SSCEEEGG
T ss_pred --CCcEEEeC
Confidence 36777763
No 408
>1n8f_A DAHP synthetase; (beta/alpha)8 barrel, metal binding protein; HET: PEP; 1.75A {Escherichia coli} SCOP: c.1.10.4 PDB: 1gg1_A 1kfl_A* 1qr7_A*
Probab=47.82 E-value=1.3e+02 Score=25.65 Aligned_cols=162 Identities=16% Similarity=0.083 Sum_probs=84.1
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCC---------CCC-CCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRT---------QPI-ASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~---------~~~-~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
.-+..+.++++.++.-+++.+++-+...++=+++...++ +|. +-.-..+.-.+.++++.--..+.|+.++
T Consensus 62 sie~~e~aleyA~~L~~~~~~l~d~l~ivmR~yfeKPRTs~g~kGl~~dP~ld~s~~i~~GL~ilr~ll~~~~e~GlPv~ 141 (350)
T 1n8f_A 62 SIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAA 141 (350)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTTTEEEEEECCCCCCCSSSSCCCTTTCTTSSSCCCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred cCCCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccCcCCcCcCCCCCCCCccccccHHHHHHHHHHHHHHHHHhCCceE
Confidence 345567788999999999999986654443333322122 111 0011124444445555433779999999
Q ss_pred EccCCCCCCC-----------Ccc-cCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhc----CCc---
Q psy13372 149 IEPVNQHSVP-----------GYY-LSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGAC----RDL--- 209 (273)
Q Consensus 149 lE~~~~~~~~-----------~~~-~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~----~~~--- 209 (273)
-|-+.+.... +.+ +.+. ...++. ..++.| ||+= +- ..+++..++..+ .++
T Consensus 142 TEvld~~~~~~vad~vd~~qIGAR~~esq-~hr~~a---sg~~~P-Vg~K----ng--t~g~i~~~l~Ai~aa~~~h~fl 210 (350)
T 1n8f_A 142 GEFLDMITPQYLADLMSWGAIGARTTESQ-VHRELA---SGLSCP-VGFK----NG--TDGTIKVAIDAINAAGAPHCFL 210 (350)
T ss_dssp EECCCSSTHHHHGGGCSEEEECTTTTTCH-HHHHHH---HTCSSC-EEEE----CC--TTCCSHHHHHHHHHHTSCCEEE
T ss_pred EeecCcccHHHHhhcCcEEEECCccccCH-HHHHHH---hcCCCe-EEEe----cC--CCCCHHHHHHHHHHHhCCceee
Confidence 9987653100 000 1111 223333 333222 2211 11 123455555541 111
Q ss_pred -------ce--------eEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeee
Q psy13372 210 -------IG--------HVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYK 253 (273)
Q Consensus 210 -------i~--------~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~ 253 (273)
.. .+|++.-.++ .|.. -..|+..+.+.+++.|+...+++...
T Consensus 211 ~~~~~G~~~~v~t~GN~~~~lilRG~~-~~ny-~~~di~~~~~~l~~~~lp~~VivD~S 267 (350)
T 1n8f_A 211 SVTKWGHSAIVNTSGNGDCHIILRGGK-EPNY-SAKHVAEVKEGLNKAGLPAQVMIDFS 267 (350)
T ss_dssp EECTTSBEEEEEECCCSCEEEEECCSS-SCCC-SHHHHHHHHHHHHHTTCCCCEEEECS
T ss_pred eeCCCCcEEEEECCCCCCEEEEECCCC-CCCC-CHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 22 3444433233 3556 77788888889999998656888865
No 409
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=47.62 E-value=17 Score=29.35 Aligned_cols=43 Identities=12% Similarity=0.082 Sum_probs=20.8
Q ss_pred HHHHHHHHHcCCCeEEecCCCC-CCCHHHHHHHHHHcCCeeEEE
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV-GVTLEQLVAAQTRHGLKQVLI 66 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~~~l~~~gL~i~~~ 66 (273)
+.+-..+..+|+..+.+..+.. +...+.+.+.+++.|++..++
T Consensus 53 e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~~~~i~~vv~ 96 (237)
T 3rjz_A 53 NLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLSGLKIQGIVA 96 (237)
T ss_dssp SHHHHHHHHHTCCEEEEEC------CHHHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHHhcCCcEEEE
Confidence 3344455556665554444321 133566666666666655544
No 410
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=47.57 E-value=28 Score=31.03 Aligned_cols=75 Identities=9% Similarity=-0.111 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
.+.+.|+.++++|+++|+|.-.+..... ..+|-.+..+..+..+...-..+|.- -..+.+++.++.|++.|
T Consensus 26 gi~~~LdyL~~LGvt~IwL~Pi~~~~~~-------~~~GY~~~dy~~~~~~~q~~~idp~~--Gt~~df~~Lv~~aH~~G 96 (485)
T 1wpc_A 26 RLNSDASNLKSKGITAVWIPPAWKGASQ-------NDVGYGAYDLYDLGEFNQKGTVRTKY--GTRSQLQAAVTSLKNNG 96 (485)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSEESST-------TCCSCSEEETTCSSCSCBTTBSSCSS--CCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEeCCcccCCCC-------CCCCCCeecccccccccccCccCCCC--CCHHHHHHHHHHHHHCC
Confidence 4678899999999999999854431111 24566655432110000000011110 01468899999999999
Q ss_pred CCeE
Q psy13372 102 IPAI 105 (273)
Q Consensus 102 ~~~i 105 (273)
.+.|
T Consensus 97 i~Vi 100 (485)
T 1wpc_A 97 IQVY 100 (485)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9875
No 411
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=47.54 E-value=1e+02 Score=24.42 Aligned_cols=90 Identities=8% Similarity=-0.080 Sum_probs=58.1
Q ss_pred CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCC--CCCCCCCCC-C
Q psy13372 45 VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGK--TESSRTQPI-A 121 (273)
Q Consensus 45 ~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~--~~~~~~~~~-~ 121 (273)
...+..+..+.+++.|+.-+.+..+. .. ..++.-+.+++.|.+...++... ...... .. .
T Consensus 21 ~~~~~~~~l~~~~~~G~~~vEl~~~~---------~~-------~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~-~~~~ 83 (269)
T 3ngf_A 21 NEVPFLERFRLAAEAGFGGVEFLFPY---------DF-------DADVIARELKQHNLTQVLFNMPPGDWAAGER-GMAA 83 (269)
T ss_dssp TTSCHHHHHHHHHHTTCSEEECSCCT---------TS-------CHHHHHHHHHHTTCEEEEEECCCSCTTTTCC-BCTT
T ss_pred ccCCHHHHHHHHHHcCCCEEEecCCc---------cC-------CHHHHHHHHHHcCCcEEEEecCCCccccCCC-CcCC
Confidence 34778899999999999988764321 11 13455666777898887665432 111100 00 1
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcE-EEEcc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLT-ALIEP 151 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~ 151 (273)
.+...+..++.+++.++.|++.|.+ +.+.+
T Consensus 84 ~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~ 114 (269)
T 3ngf_A 84 ISGREQEFRDNVDIALHYALALDCRTLHAMS 114 (269)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTTCCEEECCB
T ss_pred CccHHHHHHHHHHHHHHHHHHcCCCEEEEcc
Confidence 3445678889999999999999986 44433
No 412
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=47.51 E-value=1.1e+02 Score=25.36 Aligned_cols=55 Identities=9% Similarity=-0.117 Sum_probs=31.6
Q ss_pred Cccccccccccccccc-ccCHHHHHHHHHHcCCCeEEecCC-CCCCCHHHHHHHHHHcC
Q psy13372 4 PSFKLAANLTLLFNDL-AANYLDKYRVAAELGFRYIESWFP-PVGVTLEQLVAAQTRHG 60 (273)
Q Consensus 4 ~~~k~~~~~~~~~~~~-~~~~~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~~l~~~g 60 (273)
-|+.+|++. |.++.. +.+-.+.|+.-++. |+.||++.. |.--..+.+.+..++..
T Consensus 12 ~~i~iG~sg-Ws~~~w~~~~~~~~L~~Ya~~-F~tVEiNsTFY~~p~~~t~~~W~~~tP 68 (289)
T 1vpy_A 12 HMIRLGLTS-FSEHDYLTGKKRSTLYEYASH-LPLVEMDTAYYGIPPKERVAEWVKAVP 68 (289)
T ss_dssp CEEEEEEST-TC----------CCHHHHHHH-CSEEEECHHHHSCCCHHHHHHHHHTSC
T ss_pred ceEEEecCC-CCChhhcCCChhhHHHHHHhh-CCEEEECccccCCCCHHHHHHHHHhCC
Confidence 477889876 555542 22344556666664 999999965 33234677777777654
No 413
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=47.18 E-value=1.2e+02 Score=24.90 Aligned_cols=177 Identities=10% Similarity=0.003 Sum_probs=90.5
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHH
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTT 128 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~ 128 (273)
.+.+..+.++.|+..+=+.+... ..+...+++ .++.+.++++.|.+.|...|.-.-+..+.. +....++
T Consensus 46 ~~~~~~l~~~~G~N~VRip~~~~-~~~~~~~~~----~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~------~~~~~~~ 114 (303)
T 7a3h_A 46 YESMKWLRDDWGINVFRAAMYTS-SGGYIDDPS----VKEKVKEAVEAAIDLDIYVIIDWHILSDND------PNIYKEE 114 (303)
T ss_dssp HHHHHHHHHHTCCCEEEEEEESS-TTSTTTCTT----HHHHHHHHHHHHHHHTCEEEEEEECSSSCS------TTTTHHH
T ss_pred HHHHHHHHHhcCCCEEEEEEEeC-CCCccCCHH----HHHHHHHHHHHHHHCCCEEEEEecccCCCC------chHHHHH
Confidence 34454444466766654332111 011112333 478889999999999998763322222111 2234567
Q ss_pred HHHHHHHHHHHHhhCCcEEEEccCCCCCCCCccc------CCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHH
Q psy13372 129 LKENLIYACAELERHSLTALIEPVNQHSVPGYYL------SSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHT 202 (273)
Q Consensus 129 ~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~------~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~ 202 (273)
+.+.+++++..-+.+.-.+ +|.++-. +..... .-..++.+.| ++++. .-=+.++..++. .++...
T Consensus 115 ~~~~w~~ia~r~~~~~~Vi-~el~NEP-~~~~~~w~~~~~~~~~~~~~~I---R~~dp-~~~I~v~~~~w~---~~~~~~ 185 (303)
T 7a3h_A 115 AKDFFDEMSELYGDYPNVI-YEIANEP-NGSDVTWGNQIKPYAEEVIPII---RNNDP-NNIIIVGTGTWS---QDVHHA 185 (303)
T ss_dssp HHHHHHHHHHHHTTCTTEE-EECCSCC-CSTTCCTTTTHHHHHHHHHHHH---HTTCS-SSCEEECCHHHH---TBHHHH
T ss_pred HHHHHHHHHHHhCCCCeEE-EEeccCC-CCCCcChHHHHHHHHHHHHHHH---HhhCC-CCEEEEeCCCcc---cchhhH
Confidence 7888888888887776545 8876532 110011 1134455555 77764 433455543332 122221
Q ss_pred HHh-c--CCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEeeec
Q psy13372 203 FGA-C--RDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLEYKP 254 (273)
Q Consensus 203 i~~-~--~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE~~~ 254 (273)
... + ..-+..+|.... . -.-.+...++.+++.|.. .++=|+..
T Consensus 186 ~~~p~~~~n~v~s~H~Y~~-------~-~~~~~~~~~~~~~~~g~P-~~igEfG~ 231 (303)
T 7a3h_A 186 ADNQLADPNVMYAFHFYAG-------T-HGQNLRDQVDYALDQGAA-IFVSEWGT 231 (303)
T ss_dssp HTSCCSCTTEEEEEEEETT-------S-CCHHHHHHHHHHHHTTCC-EEEEEEES
T ss_pred hhCCCCCCCEEEEEEecCC-------C-chHHHHHHHHHHHHcCCC-EEEECCCC
Confidence 111 1 234566777642 1 111356666677777663 45567653
No 414
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=47.13 E-value=1.9e+02 Score=28.49 Aligned_cols=121 Identities=10% Similarity=0.008 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHcCCCeEEecCC----------CC---CCCHHHHHHHHHHcCCeeEEEecCC-------ccc--------
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP----------PV---GVTLEQLVAAQTRHGLKQVLINTEV-------DEN-------- 73 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~----------~~---~~~~~~~~~~l~~~gL~i~~~~~~~-------~~~-------- 73 (273)
-+.+.++.++++|+..|++-.+ ++ ..+++++.++++++||.+..--.|. ++.
T Consensus 37 ~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p 116 (971)
T 1tg7_A 37 LYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVD 116 (971)
T ss_dssp GHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCS
T ss_pred HHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecCCcccceecCCCcceeecccC
Confidence 5899999999999999999642 22 1357999999999999987522111 000
Q ss_pred -cCCCCCchhHHHHHHHHHHHHHHHHHcC----CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE
Q psy13372 74 -FGYAAVKGKESEFRASLEKTIQYACALN----IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT 146 (273)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~i~~a~~lG----~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 146 (273)
.--+.+|..++.....+++.++..+..- .+.|-++.-+- .....-.+.. ....+.++.+.++++++|+.
T Consensus 117 ~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNE-yg~~~~~~~~---~~~~~Y~~~l~~~~r~~g~~ 190 (971)
T 1tg7_A 117 GILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENE-YSGACCGYNG---FPDGSYMQYIEDHARDAGIV 190 (971)
T ss_dssp SCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSC-CCCBCTTCCC---CSCHHHHHHHHHHHHHTTCC
T ss_pred CEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccc-cCcccccccc---hhHHHHHHHHHHHHHHhCCC
Confidence 0012356667777777888888777653 34554443211 1100000000 12467788888899988864
No 415
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=47.08 E-value=91 Score=23.61 Aligned_cols=79 Identities=13% Similarity=0.020 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCc
Q psy13372 130 KENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDL 209 (273)
Q Consensus 130 ~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~ 209 (273)
.+-.+.+.+.|.+.|+.+.+-- .+...++++-| .+.....-|+.++.+-+.-..--+.|+++.+.--
T Consensus 56 ~dI~~~l~~~a~~~G~~l~~~Q----------SN~EGeLId~I---h~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P 122 (172)
T 3n8k_A 56 DELVALIEREAAELGLKAVVRQ----------SDSEAQLLDWI---HQAADAAEPVILNAGGLTHTSVALRDACAELSAP 122 (172)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE----------CSCHHHHHHHH---HHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHHHHcCCEEEEEe----------cCCHHHHHHHH---HHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCC
Confidence 3334455677888998765442 23344555555 4432234588898875543333477888888777
Q ss_pred ceeEEeccCCCC
Q psy13372 210 IGHVQIAQAPDR 221 (273)
Q Consensus 210 i~~vHi~d~~~~ 221 (273)
+.-||+++.-.|
T Consensus 123 ~VEVHiSNihaR 134 (172)
T 3n8k_A 123 LIEVHISNVHAR 134 (172)
T ss_dssp EEEEESSCTTSS
T ss_pred EEEEEcCCchhc
Confidence 888999987544
No 416
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=47.05 E-value=1.3e+02 Score=25.37 Aligned_cols=102 Identities=17% Similarity=0.171 Sum_probs=61.9
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEec-CCCCCCCCCCCCCCcchH
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIM-SGKTESSRTQPIASEDPY 126 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~-~G~~~~~~~~~~~~~~~~ 126 (273)
+.+++.+..++.|.-|.++++.. .+.++.+++.|++++++.|.-. .|..... .
T Consensus 5 ~~~~ll~~A~~~~yAV~AfNv~n----------------~e~~~Ail~AAee~~sPvIlq~s~g~~~y~------g---- 58 (323)
T 2isw_A 5 TLRQMLGEARKHKYGVGAFNVNN----------------MEQIQGIMKAVVQLKSPVILQCSRGALKYS------D---- 58 (323)
T ss_dssp CHHHHHHHHHHTTCCEEEEECCS----------------HHHHHHHHHHHHHTTCCEEEEEEHHHHHHT------T----
T ss_pred CHHHHHHHHHHCCceEEEEeeCC----------------HHHHHHHHHHHHHhCCCEEEECChhHHHhC------C----
Confidence 45778888899999999988631 4688899999999999987543 2322111 0
Q ss_pred HHHHHHHHHHHHH-Hhh-CCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccc
Q psy13372 127 TTLKENLIYACAE-LER-HSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNA 192 (273)
Q Consensus 127 ~~~~~~l~~l~~~-a~~-~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~ 192 (273)
.+.+..++.. ++. .+|.++|+- +| ..+.+...+-+ +. ..=.+.+|-+|.
T Consensus 59 ---~~~~~~~v~~aa~~~~~VPValHl----DH----g~~~e~i~~ai---~~---GFtSVMiDgS~~ 109 (323)
T 2isw_A 59 ---MIYLKKLCEAALEKHPDIPICIHL----DH----GDTLESVKMAI---DL---GFSSVMIDASHH 109 (323)
T ss_dssp ---THHHHHHHHHHHHHCTTSCEEEEE----EE----ECSHHHHHHHH---HT---TCSEEEECCTTS
T ss_pred ---HHHHHHHHHHHHHhcCCCcEEEEC----CC----CCCHHHHHHHH---Hc---CCCeEEecCCCC
Confidence 1222333333 334 789999986 11 34455544444 32 233556666654
No 417
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=47.05 E-value=1.3e+02 Score=25.24 Aligned_cols=102 Identities=11% Similarity=0.068 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEec-CCCCCCCCCCCCCCcchH
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIM-SGKTESSRTQPIASEDPY 126 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~-~G~~~~~~~~~~~~~~~~ 126 (273)
+.+++.+..++.|..+.++++. + ++.++.+++.|++++++.|.-. .|.....
T Consensus 4 ~~~~ll~~A~~~~yAV~AfNv~-------n---------~e~~~avi~AAee~~sPvIlq~s~g~~~y~----------- 56 (307)
T 3n9r_A 4 KGNEILLKAHKEGYGVGAFNFV-------N---------FEMLNAIFEAGNEENSPLFIQASEGAIKYM----------- 56 (307)
T ss_dssp CHHHHHHHHHHHTCCEEEEECS-------S---------HHHHHHHHHHHHHHTCCEEEEEEHHHHHHH-----------
T ss_pred CHHHHHHHHHHcCceEEEEeeC-------C---------HHHHHHHHHHHHHhCCCEEEEcChhhhhhC-----------
Confidence 4577888888999999998863 1 4688899999999999987543 2321110
Q ss_pred HHHHHHHHHHHHHHh-h-CCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccc
Q psy13372 127 TTLKENLIYACAELE-R-HSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNA 192 (273)
Q Consensus 127 ~~~~~~l~~l~~~a~-~-~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~ 192 (273)
-.+.+..++..+. . .+|.++|+- . | ..+.+...+-+ +. ..=.+.+|-+|.
T Consensus 57 --g~~~~~~~v~~aa~~~~~VPValHL-D---H----g~~~e~~~~ai---~~---GFtSVMiDgS~~ 108 (307)
T 3n9r_A 57 --GIDMAVGMVKIMCERYPHIPVALHL-D---H----GTTFESCEKAV---KA---GFTSVMIDASHH 108 (307)
T ss_dssp --CHHHHHHHHHHHHHHSTTSCEEEEE-E---E----ECSHHHHHHHH---HH---TCSEEEECCTTS
T ss_pred --CHHHHHHHHHHHHHhcCCCcEEEEC-C---C----CCCHHHHHHHH---Hh---CCCcEEEECCCC
Confidence 0123444444443 3 689999986 1 2 23455555555 32 233556666655
No 418
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=47.01 E-value=29 Score=30.83 Aligned_cols=75 Identities=8% Similarity=-0.011 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
.+.+.|+.++++|+++|+|.-.+..... ..+|-.+..+..+..+...-..+|.- -..+.+++.++.|++.|
T Consensus 22 gi~~~LdyL~~LGvt~I~L~Pi~~~~~~-------~~~GY~~~dy~~~~~~~~~~~id~~~--Gt~~df~~lv~~aH~~G 92 (483)
T 3bh4_A 22 RLQNDAEHLSDIGITAVWIPPAYKGLSQ-------SDNGYGPYDLYDLGEFQQKGTVRTKY--GTKSELQDAIGSLHSRN 92 (483)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCSEESST-------TSCSSSEEETTCSSCSCCSSCSSCSS--CCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCEEEcCccccCCCC-------CCCCcccccccccccccccCccCCCC--CCHHHHHHHHHHHHHCC
Confidence 4678899999999999999854431111 23555555432110000000011110 01467899999999999
Q ss_pred CCeE
Q psy13372 102 IPAI 105 (273)
Q Consensus 102 ~~~i 105 (273)
.+.|
T Consensus 93 i~Vi 96 (483)
T 3bh4_A 93 VQVY 96 (483)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9875
No 419
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=46.81 E-value=68 Score=24.03 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHH-HHHHhhCCcEEE
Q psy13372 83 ESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYA-CAELERHSLTAL 148 (273)
Q Consensus 83 ~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~a~~~gv~i~ 148 (273)
.+...+.+++.++.+...|++.+.+.+...+.. ....+...++.+.+. .+.|+++|+.+.
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~~------~~~~~~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEPN------RSDPMRKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCCC------TTSHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCCC------cchHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 566778889999999888888777743222221 122233333333333 455677776543
No 420
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=46.78 E-value=26 Score=28.78 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHcCCCeEEec-CCCCCCCHHHHHHHHHHcCCeeEEEec
Q psy13372 22 NYLDKYRVAAELGFRYIESW-FPPVGVTLEQLVAAQTRHGLKQVLINT 68 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~-~~~~~~~~~~~~~~l~~~gL~i~~~~~ 68 (273)
.++..++.+++.|+|+|=+. .|. ....++.+.++++|+....+..
T Consensus 111 g~e~f~~~~~~aGvdgvii~Dlp~--ee~~~~~~~~~~~gl~~i~lia 156 (267)
T 3vnd_A 111 GIDEFYTKAQAAGVDSVLIADVPV--EESAPFSKAAKAHGIAPIFIAP 156 (267)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCG--GGCHHHHHHHHHTTCEEECEEC
T ss_pred hHHHHHHHHHHcCCCEEEeCCCCH--hhHHHHHHHHHHcCCeEEEEEC
Confidence 66899999999999998775 233 3467899999999999875543
No 421
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=46.48 E-value=1.3e+02 Score=25.31 Aligned_cols=71 Identities=11% Similarity=0.074 Sum_probs=53.6
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEEEcc--CCCCC---CCCcccCCHHHHHHHHHHHhhcCCCceeEeeeccccccc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTALIEP--VNQHS---VPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRI 195 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~--~~~~~---~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~ 195 (273)
+...++.-++..++++++|+++||.+--|- +.... ......++|+++.+++ ++.+-..+.+.+=+.|-.+.
T Consensus 107 S~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv---~~TgvD~LAvaiGt~HG~Yk 182 (323)
T 2isw_A 107 SHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFV---ELTGVDALAVAIGTSHGAYK 182 (323)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHH---HHHCCSEEEECSSCCSSSBC
T ss_pred CCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHH---HHHCCCEEEEecCccccccC
Confidence 445678889999999999999999887774 22100 0123579999999999 99988888888888887665
No 422
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=46.42 E-value=80 Score=22.77 Aligned_cols=60 Identities=13% Similarity=0.090 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+..-++.++++|...|++...++....... . .+...+...+.|.++.+.+++.|+.+-.+
T Consensus 38 s~~al~~A~~la~~~~a~l~llhV~~~~~~----~-~~~~~~~~~~~l~~~~~~~~~~g~~~~~~ 97 (155)
T 3dlo_A 38 AERVLRFAAEEARLRGVPVYVVHSLPGGGR----T-KDEDIIEAKETLSWAVSIIRKEGAEGEEH 97 (155)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEECCSTT----S-CHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEEcCCCc----c-cHHHHHHHHHHHHHHHHHHHhcCCCceEE
Confidence 345677889999999999877765322111 1 34455667778888888999889876554
No 423
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=46.29 E-value=1.4e+02 Score=25.36 Aligned_cols=121 Identities=7% Similarity=-0.065 Sum_probs=68.1
Q ss_pred HHHHHHHHHcCCCeEEecCCCC---C--------CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPV---G--------VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~---~--------~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
...++.++++|-|+|-+...++ + ..+.++.+..+++|+.+..--.+++...+...+++.....-+.+..
T Consensus 113 ~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~ 192 (332)
T 3iv3_A 113 DWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVND 192 (332)
T ss_dssp TCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHH
T ss_pred ccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHH
Confidence 3458889999999999986532 1 1246777789999999876222211111111122222112355778
Q ss_pred HHHHH--HHcCCCeEEec-CCCCCC--CCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 93 TIQYA--CALNIPAIHIM-SGKTES--SRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 93 ~i~~a--~~lG~~~i~~~-~G~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
+++.+ ..+|+..+.+. ||.... ..... ...-..+..+++++++. +...+.+.
T Consensus 193 a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~-~~~y~~~ea~~~f~~~~---~a~~~P~v 249 (332)
T 3iv3_A 193 AMKVFSAERFGIDVLKVEVPVNMVYVEGFAEG-EVVYSKEEAAQAFREQE---ASTDLPYI 249 (332)
T ss_dssp HHHHHTSGGGCCSEEEECCSSCGGGBTTTCSS-CCCBCHHHHHHHHHHHH---HTCSSCEE
T ss_pred HHHHHhhcCcCCcEEEEecCCChhhhcccccc-cccccHHHHHHHHHHHH---hcCCCCEE
Confidence 88888 67899999885 443310 00000 01223355566666655 44566644
No 424
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=46.15 E-value=33 Score=26.62 Aligned_cols=60 Identities=15% Similarity=0.154 Sum_probs=38.6
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.++.|++.||+- -+..+.--.++++.+..++.| |+++|+|... .-+.++-=|+ .+.
T Consensus 45 ~A~~ViIVPGYG-----------mAVAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGhMNVLL---AEA 102 (203)
T 2fsv_C 45 NASKVIIVPGYG-----------MAVAQAQHALREMADVLKKEGVEVSYAIHPVAG--------RMPGHMNVLL---AEA 102 (203)
T ss_dssp HCSEEEEEECHH-----------HHHHTCHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTTHHHHHH---HHT
T ss_pred hCCcEEEEcCch-----------HhHHHHHHHHHHHHHHHHHcCCeEEEEeccccc--------CCCCCccEEE---EEe
Confidence 467888877752 233344456788888888888 5789999652 2244555566 665
Q ss_pred CCCc
Q psy13372 179 GISN 182 (273)
Q Consensus 179 ~~~~ 182 (273)
+-|+
T Consensus 103 ~VPY 106 (203)
T 2fsv_C 103 NVPY 106 (203)
T ss_dssp TCCG
T ss_pred cCCH
Confidence 5453
No 425
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=45.96 E-value=24 Score=31.01 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=31.6
Q ss_pred CHHHHHHHHHHcCCCeEEecCC--------CC-------------CCCHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP--------PV-------------GVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~--------~~-------------~~~~~~~~~~l~~~gL~i~~ 65 (273)
.+.+.|+.++++|+++|.+.-. |+ ..+.+++.+.+.++||.|..
T Consensus 24 gi~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~Vil 88 (441)
T 1lwj_A 24 GLKNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVL 88 (441)
T ss_dssp HHHHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 3567789999999999999831 11 11246666777888888875
No 426
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=45.64 E-value=1.1e+02 Score=24.22 Aligned_cols=105 Identities=10% Similarity=0.125 Sum_probs=56.1
Q ss_pred HHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCe
Q psy13372 25 DKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPA 104 (273)
Q Consensus 25 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 104 (273)
+.++.+...++|+|=+..... . ....+.+.+.|+.++.+..........+. ...+..+..+.+.+...+.|.+.
T Consensus 60 ~~~~~~~~~~vdgiIi~~~~~-~--~~~~~~l~~~~iPvV~~~~~~~~~~~~~~---V~~D~~~~g~~a~~~L~~~G~~~ 133 (292)
T 3k4h_A 60 GVVKMVQGRQIGGIILLYSRE-N--DRIIQYLHEQNFPFVLIGKPYDRKDEITY---VDNDNYTAAREVAEYLISLGHKQ 133 (292)
T ss_dssp HHHHHHHTTCCCEEEESCCBT-T--CHHHHHHHHTTCCEEEESCCSSCTTTSCE---EECCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHcCCCCEEEEeCCCC-C--hHHHHHHHHCCCCEEEECCCCCCCCCCCE---EEECcHHHHHHHHHHHHHCCCce
Confidence 345566667777776643321 1 24556677889999887654321100110 00111234445666666689999
Q ss_pred EEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 105 IHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 105 i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
|.+..|.... ....++++-..+..+++|+.+
T Consensus 134 i~~i~~~~~~------------~~~~~R~~gf~~~l~~~g~~~ 164 (292)
T 3k4h_A 134 IAFIGGGSDL------------LVTRDRLAGMSDALKLADIVL 164 (292)
T ss_dssp EEEEESCTTB------------HHHHHHHHHHHHHHHHTTCCC
T ss_pred EEEEeCcccc------------hhHHHHHHHHHHHHHHcCCCC
Confidence 8887654311 122244455556666777654
No 427
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=45.48 E-value=1.2e+02 Score=24.48 Aligned_cols=45 Identities=18% Similarity=-0.018 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEe
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLIN 67 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~ 67 (273)
.++..++.+++.|+++|=+.. ........+.+.++++|+.+..+.
T Consensus 110 g~~~f~~~~~~aG~dgvii~d-l~~ee~~~~~~~~~~~gl~~i~l~ 154 (262)
T 2ekc_A 110 GLEKFCRLSREKGIDGFIVPD-LPPEEAEELKAVMKKYVLSFVPLG 154 (262)
T ss_dssp CHHHHHHHHHHTTCCEEECTT-CCHHHHHHHHHHHHHTTCEECCEE
T ss_pred hHHHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHHHHcCCcEEEEe
Confidence 557889999999999987752 111346778888999999875443
No 428
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=45.39 E-value=1.3e+02 Score=24.93 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHcCCCeEEe-c--CCC-CCCCC---CCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEEEccCC
Q psy13372 86 FRASLEKTIQYACALNIPAIHI-M--SGK-TESSR---TQPIASEDPYTTLKENLIYACAELERH-SLTALIEPVN 153 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~-~--~G~-~~~~~---~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~lE~~~ 153 (273)
.++.+.++++.|.+.|...|.- | +|. ..... ..-...+...+.+.+.++++++..+.+ .-.+++|.++
T Consensus 75 ~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~N 150 (341)
T 1vjz_A 75 FFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKEVEEKTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLIN 150 (341)
T ss_dssp GHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTTSCCSSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSS
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCCCCcccccCCCccccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEecc
Confidence 4678999999999999997643 3 232 11100 000113355778888888888888876 5557888765
No 429
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=45.38 E-value=99 Score=23.55 Aligned_cols=186 Identities=13% Similarity=0.086 Sum_probs=93.0
Q ss_pred CHHHHHHHHHHc--CCCeEEecCCC-CCCCHHHHHHHHHHc-CCeeEEEecCCccccCCCCC-chhHHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAEL--GFRYIESWFPP-VGVTLEQLVAAQTRH-GLKQVLINTEVDENFGYAAV-KGKESEFRASLEKTIQY 96 (273)
Q Consensus 22 ~~~~~l~~~~~~--G~~~vEl~~~~-~~~~~~~~~~~l~~~-gL~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~ 96 (273)
++++.++.+.++ |.+.+|+..+. -....+-++++.+.. ++.+...... .+ ++ ..++.
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~~~~~~~~i~~~l~~--------~di~~----------~~~~~ 72 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVKKAHPDKIVFADMKT--------MDAGE----------LEADI 72 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHHHHSTTSEEEEEEEE--------CSCHH----------HHHHH
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHHHhCCCCeEEEEEEe--------cCccH----------HHHHH
Confidence 678887777655 45999997652 002234444444444 6666542211 12 21 13477
Q ss_pred HHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 97 ACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 97 a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
+..+|+..+++|.+.. . +.+.++.+.++++|+.+++..++ .+++.+..+-+ .
T Consensus 73 a~~~Gad~v~vh~~~~----------~-------~~~~~~~~~~~~~g~~~gv~~~s--------~~~p~~~~~~~---~ 124 (207)
T 3ajx_A 73 AFKAGADLVTVLGSAD----------D-------STIAGAVKAAQAHNKGVVVDLIG--------IEDKATRAQEV---R 124 (207)
T ss_dssp HHHTTCSEEEEETTSC----------H-------HHHHHHHHHHHHHTCEEEEECTT--------CSSHHHHHHHH---H
T ss_pred HHhCCCCEEEEeccCC----------h-------HHHHHHHHHHHHcCCceEEEEec--------CCChHHHHHHH---H
Confidence 8889999999986421 0 12345556666678887665421 23555533444 4
Q ss_pred hcCCCceeEeeecccccccCCChH-HHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceEEEe-eec
Q psy13372 177 AHGISNVQLQFDFFNAQRICGDLT-HTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYVGLE-YKP 254 (273)
Q Consensus 177 ~~~~~~~g~~~D~~h~~~~~~~~~-~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~~lE-~~~ 254 (273)
..+...+++.. .......+.++. +.++++.+. +.| ..-. |-++...+ +.+.+.|-++.++-- +..
T Consensus 125 ~~g~d~v~~~~-~~~~~~~g~~~~~~~i~~~~~~-------~~p---i~v~-GGI~~~~~-~~~~~aGad~vvvGsaI~~ 191 (207)
T 3ajx_A 125 ALGAKFVEMHA-GLDEQAKPGFDLNGLLAAGEKA-------RVP---FSVA-GGVKVATI-PAVQKAGAEVAVAGGAIYG 191 (207)
T ss_dssp HTTCSEEEEEC-CHHHHTSTTCCTHHHHHHHHHH-------TSC---EEEE-SSCCGGGH-HHHHHTTCSEEEESHHHHT
T ss_pred HhCCCEEEEEe-cccccccCCCchHHHHHHhhCC-------CCC---EEEE-CCcCHHHH-HHHHHcCCCEEEEeeeccC
Confidence 44434444432 111111233332 334433221 110 0012 44444333 334568887655432 334
Q ss_pred CCChHHHHHHHHH
Q psy13372 255 QGNTKEGLEEFLK 267 (273)
Q Consensus 255 ~~~~~~~~~~~~~ 267 (273)
..++.+.++ .++
T Consensus 192 ~~dp~~~~~-~~~ 203 (207)
T 3ajx_A 192 AADPAAAAK-ELR 203 (207)
T ss_dssp SSSHHHHHH-HHH
T ss_pred CCCHHHHHH-HHH
Confidence 567888877 444
No 430
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=45.00 E-value=1.4e+02 Score=25.19 Aligned_cols=96 Identities=10% Similarity=0.011 Sum_probs=58.5
Q ss_pred HHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEe-cC--CCCCCCCCCCCCCcchHHH
Q psy13372 52 LVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHI-MS--GKTESSRTQPIASEDPYTT 128 (273)
Q Consensus 52 ~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~-~~--G~~~~~~~~~~~~~~~~~~ 128 (273)
..+.+++.|+..+-+..... . + .+...+..++.+.++++.|.+.|...|.- |. +.....+..|. .....+.
T Consensus 90 di~~ik~~G~N~VRi~~~~~-~--~--~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~-~~~~~~~ 163 (359)
T 4hty_A 90 HFEVIRSWGANVVRVPVHPR-A--W--KERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNS-YHTTKGE 163 (359)
T ss_dssp HHHHHHHTTCSEEEEEECHH-H--H--HHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGG-GCCCHHH
T ss_pred HHHHHHhcCCCEEEEeccHH-H--h--hccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCc-chhHHHH
Confidence 34557788887775543211 0 0 11123456889999999999999987643 32 11111111010 1124678
Q ss_pred HHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 129 LKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 129 ~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+.+.++++++.-+.+.-.+++|..+
T Consensus 164 ~~~~~~~la~ryk~~p~Vi~~el~N 188 (359)
T 4hty_A 164 TFDFWRRVSERYNGINSVAFYEIFN 188 (359)
T ss_dssp HHHHHHHHHHHTTTCTTEEEEESCS
T ss_pred HHHHHHHHHHHhCCCCcEEEEEecc
Confidence 8889999998888888777888654
No 431
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=44.85 E-value=1.5e+02 Score=25.47 Aligned_cols=19 Identities=11% Similarity=0.093 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q psy13372 83 ESEFRASLEKTIQYACALN 101 (273)
Q Consensus 83 ~~~~~~~~~~~i~~a~~lG 101 (273)
+++.++.+...++.|+..|
T Consensus 109 ~~e~l~~~~~~v~~ak~~g 127 (382)
T 2ztj_A 109 IPRIIEEAKEVIAYIREAA 127 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 4555666777777777776
No 432
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=44.73 E-value=35 Score=30.73 Aligned_cols=74 Identities=16% Similarity=0.017 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccc-cCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDEN-FGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.+.|+.++++||++|+|.-.+..... ..+|-.+..+.....+. .+ ..++.- -..+.+++.++.|++.
T Consensus 25 gi~~~LdyLk~LGvt~IwL~Pi~~~~~~-------~~~GY~~~dy~~l~~f~~~~-~idp~~--Gt~~dfk~Lv~~aH~~ 94 (515)
T 1hvx_A 25 KVANEANNLSSLGITALWLPPAYKGTSR-------SDVGYGVYDLYDLGEFNQKG-AVRTKY--GTKAQYLQAIQAAHAA 94 (515)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCSEESST-------TCCSSSEEETTCSSCSCBTT-BSSCSS--CCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCEEEeCCcccCCCC-------CCCCcCeecccccccccccC-ccCCCC--CCHHHHHHHHHHHHHC
Confidence 4678899999999999999854431110 23555555432100000 00 011110 1146889999999999
Q ss_pred CCCeE
Q psy13372 101 NIPAI 105 (273)
Q Consensus 101 G~~~i 105 (273)
|.+.|
T Consensus 95 Gi~Vi 99 (515)
T 1hvx_A 95 GMQVY 99 (515)
T ss_dssp TCEEE
T ss_pred CCEEE
Confidence 99875
No 433
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=44.73 E-value=85 Score=25.43 Aligned_cols=120 Identities=10% Similarity=0.008 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCC---C-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE-EEccCCCCCCCCccc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTES---S-RTQPIASEDPYTTLKENLIYACAELERHSLTA-LIEPVNQHSVPGYYL 162 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~---~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i-~lE~~~~~~~~~~~~ 162 (273)
..+++++++|++-|+ .|..|||.+.. + +..+.++++..+.++..+..|..+|+..|+++ .+-||+-- -+...
T Consensus 38 ~~M~~Tv~lA~~~gV-~IGAHPgypDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a~~~G~~l~hVKPHGAL--YN~~a 114 (252)
T 1xw8_A 38 QIMQACVREAIKNGV-AIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRHVKPHGML--YNQAA 114 (252)
T ss_dssp HHHHHHHHHHHHHTC-EEEEECCCC-------CCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCHHH--HHHHT
T ss_pred HHHHHHHHHHHHcCC-eeecCCCCCcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEeEEeCcCHHH--HHHHh
Confidence 357789999999887 46778887621 1 22344567778888899999999999999885 45554321 13356
Q ss_pred CCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcceeEEecc
Q psy13372 163 SSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQ 217 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d 217 (273)
.+.+.+..+++....++ |.+-+.- ..+..+.+.-++++=.+..==+.|
T Consensus 115 ~d~~~A~av~~av~~~d-~~L~l~~------l~gs~~~~~A~~~Gl~~~~E~FAD 162 (252)
T 1xw8_A 115 KEAQLADAIARAVYACD-PALILVG------LAGSELIRAGKQYGLTTREEVFAD 162 (252)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCEEEE------ETTSHHHHHHHHTTCCEEEEECTT
T ss_pred hCHHHHHHHHHHHHHhC-CCcEEEe------cCChHHHHHHHHcCCcEEEEEeec
Confidence 67788888885555664 4444322 223335555666665555555555
No 434
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A
Probab=44.62 E-value=41 Score=29.10 Aligned_cols=36 Identities=17% Similarity=0.090 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCC--C-------HHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGV--T-------LEQLVAAQTR 58 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~--~-------~~~~~~~l~~ 58 (273)
...+++.+++.|||||+|.+.+... + ++++++.+++
T Consensus 116 i~siv~~l~~~~fDGiDiDwE~p~~~~d~~~~~~ll~eLr~~l~~ 160 (392)
T 1ll7_A 116 ADTSLKLMKDLGFDGIDIDWQYPEDEKQANDFVLLLKACREALDA 160 (392)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcEEEEeeCCCChHHHHHHHHHHHHHHHHHHh
Confidence 3556788899999999999865311 1 3678888876
No 435
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=44.60 E-value=29 Score=30.52 Aligned_cols=64 Identities=6% Similarity=-0.085 Sum_probs=39.6
Q ss_pred HHHHHHHHHH-----HHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 88 ASLEKTIQYA-----CALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 88 ~~~~~~i~~a-----~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
+.+++.++.+ +.+|.+++++--|.....++.--+....-+++=..|+.+++++++.|++++|-.
T Consensus 29 ~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~ 97 (417)
T 1szn_A 29 SKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYS 97 (417)
T ss_dssp HHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEe
Confidence 5677788888 889999999976655321110000000111222368899999999999966644
No 436
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=44.45 E-value=1.4e+02 Score=24.87 Aligned_cols=135 Identities=11% Similarity=0.025 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+.++.++.+++. .++.+...- ...+.+..+++ .|+....+................+++.++.++..++.|+..|
T Consensus 61 d~~~~~~~~~~~--~~~~~~~l~--~~~~~i~~a~~-~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G 135 (307)
T 1ydo_A 61 DAIDVAKGIDRE--KGVTYAALV--PNQRGLENALE-GGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKAN 135 (307)
T ss_dssp THHHHHHHSCCC--TTCEEEEEC--CSHHHHHHHHH-HTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHhhhc--CCCeEEEEe--CCHHhHHHHHh-CCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCC
Confidence 455555555443 333332111 13455555444 5888776543221000000112346778899999999999999
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCcccCCHHHHHHHHHHHh
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT-ALIEPVNQHSVPGYYLSSFRVAERLIRELR 176 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~~~~~~~~~~~li~~~~ 176 (273)
........-.++.... .....+.+++ +++.+.+.|+. |.|=-+. -..+|.+..++++.+.
T Consensus 136 ~~v~~~i~~~~~~~~~----~~~~~~~~~~----~~~~~~~~Ga~~i~l~DT~-------G~~~P~~v~~lv~~l~ 196 (307)
T 1ydo_A 136 LTTRAYLSTVFGCPYE----KDVPIEQVIR----LSEALFEFGISELSLGDTI-------GAANPAQVETVLEALL 196 (307)
T ss_dssp CEEEEEEECTTCBTTT----BCCCHHHHHH----HHHHHHHHTCSCEEEECSS-------CCCCHHHHHHHHHHHH
T ss_pred CEEEEEEEEEecCCcC----CCCCHHHHHH----HHHHHHhcCCCEEEEcCCC-------CCcCHHHHHHHHHHHH
Confidence 8753222111211100 1122334443 34444444543 4444321 2457899999994443
No 437
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=44.42 E-value=1.2e+02 Score=24.03 Aligned_cols=154 Identities=16% Similarity=0.059 Sum_probs=87.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcC-CeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHG-LKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~g-L~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
+..+.++.+.+.|++.||+..... ...+.++++.+++. +.+- .++. + +. ..++.|...
T Consensus 39 ~~~~~~~al~~gGv~~iel~~k~~-~~~~~i~~l~~~~~~~~ig-agtv------l--~~-----------d~~~~A~~a 97 (225)
T 1mxs_A 39 DILPLADALAAGGIRTLEVTLRSQ-HGLKAIQVLREQRPELCVG-AGTV------L--DR-----------SMFAAVEAA 97 (225)
T ss_dssp GHHHHHHHHHHTTCCEEEEESSST-HHHHHHHHHHHHCTTSEEE-EECC------C--SH-----------HHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCc-cHHHHHHHHHHhCcccEEe-eCeE------e--eH-----------HHHHHHHHC
Confidence 567778888899999999996532 33455555666653 3322 2221 1 11 346667778
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCC
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGI 180 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~ 180 (273)
|+..++.+ .. + ..+.+.++.+|+.+.+ + +.|+.++.+.. +.+.
T Consensus 98 GAd~v~~p--~~--d------------------~~v~~~~~~~g~~~i~---------G--~~t~~e~~~A~----~~Ga 140 (225)
T 1mxs_A 98 GAQFVVTP--GI--T------------------EDILEAGVDSEIPLLP---------G--ISTPSEIMMGY----ALGY 140 (225)
T ss_dssp TCSSEECS--SC--C------------------HHHHHHHHHCSSCEEC---------E--ECSHHHHHHHH----TTTC
T ss_pred CCCEEEeC--CC--C------------------HHHHHHHHHhCCCEEE---------e--eCCHHHHHHHH----HCCC
Confidence 99999742 11 1 1456777788876653 2 45677776655 4566
Q ss_pred CceeEeeecccccccCCChHHHHHhcCCcceeEEeccCCCCCCCCCCCcccHHHHHHHHHHcCCCceE
Q psy13372 181 SNVQLQFDFFNAQRICGDLTHTFGACRDLIGHVQIAQAPDRQEPHARGEIDYAYVFELLAREGYEGYV 248 (273)
Q Consensus 181 ~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~~~~~~~g~~G~id~~~i~~~L~~~gy~g~~ 248 (273)
+.+++ +.....++ .+.++.+...+.++.+.= . |-|+...+-+.++..|-++..
T Consensus 141 d~vk~----FPa~~~~G--~~~lk~i~~~~~~ipvva--------i-GGI~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 141 RRFKL----FPAEISGG--VAAIKAFGGPFGDIRFCP--------T-GGVNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp CEEEE----TTHHHHTH--HHHHHHHHTTTTTCEEEE--------B-SSCCTTTHHHHHHSTTBCCEE
T ss_pred CEEEE----ccCccccC--HHHHHHHHhhCCCCeEEE--------E-CCCCHHHHHHHHhccCCEEEE
Confidence 77888 22211111 344554433332333322 2 666766666666656766655
No 438
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=44.40 E-value=1.1e+02 Score=23.89 Aligned_cols=86 Identities=9% Similarity=-0.068 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCC--CCCCCCCCCCCcc
Q psy13372 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGK--TESSRTQPIASED 124 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~--~~~~~~~~~~~~~ 124 (273)
.+..+..+.+++.|+.-+.+..+. .. ...+.-+.++..|.+...+++.. .......-...+.
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~---------~~-------~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~ 78 (260)
T 1k77_A 15 VPFIERFAAARKAGFDAVEFLFPY---------NY-------STLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPG 78 (260)
T ss_dssp SCGGGHHHHHHHHTCSEEECSCCT---------TS-------CHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTT
T ss_pred CCHHHHHHHHHHhCCCEEEecCCC---------CC-------CHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChh
Confidence 456666677889999887764321 10 12344556677898887666432 1000000000344
Q ss_pred hHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 125 PYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 125 ~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..+..++.+++.++.|++.|+...
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v 102 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQV 102 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEE
Confidence 567889999999999999998744
No 439
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=44.32 E-value=95 Score=25.42 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=28.4
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
+.+.++.|++.|+..+.++- .+ .+ ...++.+.++++|+.+
T Consensus 114 ~~~f~~~~~~aGvdGvIipD--lp--------~e--------e~~~~~~~~~~~gl~~ 153 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLIAD--VP--------TN--------ESQPFVAAAEKFGIQP 153 (271)
T ss_dssp HHHHHHHHHHHTCCEEEETT--SC--------GG--------GCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHCCCCEEEECC--CC--------HH--------HHHHHHHHHHHcCCeE
Confidence 46788889999999988841 11 11 1456678889999874
No 440
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=44.30 E-value=1.4e+02 Score=25.02 Aligned_cols=112 Identities=14% Similarity=-0.003 Sum_probs=62.6
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccC-CCCCc--hhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFG-YAAVK--GKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~i~~a~~l 100 (273)
.+.++.+-++|.+-|-=-.-. ..+++.+.++++|..++.++... .+. ....+ +..++..+.+++.++.|.+.
T Consensus 115 ~~Va~aAl~aGa~iINDVsg~---~~~~m~~v~a~~g~~vVlMh~~G--~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~ 189 (314)
T 3tr9_A 115 PRVMREAVNTGADMINDQRAL---QLDDALTTVSALKTPVCLMHFPS--ETRKPGSTTHFYFLQSVKKELQESIQRCKKA 189 (314)
T ss_dssp HHHHHHHHHHTCCEEEETTTT---CSTTHHHHHHHHTCCEEEECCCC--TTCCTTSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECCCC---CchHHHHHHHHhCCeEEEECCCC--CCcccccccccchHHHHHHHHHHHHHHHHHc
Confidence 344455555566544221111 12367788889999988776431 110 00011 23456688999999999999
Q ss_pred CCC--eEEecCCCCC--CCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 101 NIP--AIHIMSGKTE--SSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 101 G~~--~i~~~~G~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
|++ .|.+-||.-. -. ...++..+.|+.+-.+ +..|..+.+
T Consensus 190 GI~~~~IilDPG~G~~~F~--------Kt~~~n~~lL~~l~~l-~~lg~PvL~ 233 (314)
T 3tr9_A 190 GISEDRIIIDPGFGQGNYG--------KNVSENFYLLNKLPEF-VAMGLPVLS 233 (314)
T ss_dssp TCCGGGEEEECCCCSGGGC--------CCHHHHHHHHHTTHHH-HTTSSCBEE
T ss_pred CCCHhHEEEeCCCCchhhc--------CCHHHHHHHHHHHHHH-hcCCCCEEE
Confidence 998 7888776321 11 1233444445554444 345655444
No 441
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=44.29 E-value=1.5e+02 Score=25.32 Aligned_cols=91 Identities=4% Similarity=-0.097 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHcCCeeEEEe----cCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCC------CCC
Q psy13372 47 VTLEQLVAAQTRHGLKQVLIN----TEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTE------SSR 116 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~------~~~ 116 (273)
.+..+..+.+++.|+.-+.++ .+.+ .... ...+.+...-+.++..|.+...+++.... ...
T Consensus 33 ~~~~e~l~~aa~~G~~~VEl~~~~l~p~~------~~~~---~~~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l 103 (393)
T 1xim_A 33 LDPVEAVHKLAEIGAYGITFHDDDLVPFG------SDAQ---TRDGIIAGFKKALDETGLIVPMVTTNLFTHPVFKDGGF 103 (393)
T ss_dssp CCHHHHHHHHHHHTCSEEECBHHHHSCTT------CCHH---HHHHHHHHHHHHHHHHTCBCCEEECCCSSSGGGTTCST
T ss_pred CCHHHHHHHHHHhCCCEEEeecccCCCcc------cccc---ccHHHHHHHHHHHHHhCCEEEEEecCCcCCcccccCCC
Confidence 467888888999999888775 2210 1111 11234556666777888887666553321 010
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 117 TQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..| .+...+..++.+++.+++|++.|.+..
T Consensus 104 ~sp--d~~~r~~~i~~~~~~i~~A~~LGa~~v 133 (393)
T 1xim_A 104 TSN--DRSVRRYAIRKVLRQMDLGAELGAKTL 133 (393)
T ss_dssp TCS--SHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 101 334578889999999999999998633
No 442
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=44.28 E-value=1.3e+02 Score=24.68 Aligned_cols=123 Identities=11% Similarity=0.008 Sum_probs=75.2
Q ss_pred CHHHHHHHHHHcC--CCeEEecCC----CCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELG--FRYIESWFP----PVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQ 95 (273)
Q Consensus 22 ~~~~~l~~~~~~G--~~~vEl~~~----~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (273)
++...=+.+..+| .|+|-+.+- ++ . +++..++.+++|+.+..=+++. +. .-....+.+.++
T Consensus 51 g~~~~~DlLe~ag~yID~lKfg~GTs~l~~-~-l~ekI~l~~~~gV~v~~GGTlf--E~---------~l~qg~~~~yl~ 117 (276)
T 1u83_A 51 PLQFFKDAIAGASDYIDFVKFGWGTSLLTK-D-LEEKISTLKEHDITFFFGGTLF--EK---------YVSQKKVNEFHR 117 (276)
T ss_dssp CHHHHHHHHHHHGGGCCEEEECTTGGGGCT-T-HHHHHHHHHHTTCEEEECHHHH--HH---------HHHTTCHHHHHH
T ss_pred CHHHHHHHHHHhhhhcceEEecCcchhhhH-H-HHHHHHHHHHcCCeEeCCcHHH--HH---------HHHcCcHHHHHH
Confidence 5555555555555 788888763 33 3 8888899999999988533221 11 111236788999
Q ss_pred HHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 96 YACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 96 ~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
.|+.+|...|-+-.|...- +.+.+. ++.+.|++. .++..|-=... .+-....++.+.++.++
T Consensus 118 ~~k~lGF~~IEISdGti~l-------~~~~~~-------~lI~~a~~~-f~Vl~EvG~K~-~~~~~~~~~~~~I~~~~ 179 (276)
T 1u83_A 118 YCTYFGCEYIEISNGTLPM-------TNKEKA-------AYIADFSDE-FLVLSEVGSKD-AELASRQSSEEWLEYIV 179 (276)
T ss_dssp HHHHTTCSEEEECCSSSCC-------CHHHHH-------HHHHHHTTT-SEEEEECSCCC-------CCSTHHHHHHH
T ss_pred HHHHcCCCEEEECCCcccC-------CHHHHH-------HHHHHHHhh-cEEeeeccccC-ccccCCCCHHHHHHHHH
Confidence 9999999999998777633 233333 344577777 88888851110 00123446666666663
No 443
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A*
Probab=44.26 E-value=41 Score=29.63 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCC--C-------HHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGV--T-------LEQLVAAQTR 58 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~--~-------~~~~~~~l~~ 58 (273)
..+++.+++.|||||+|.+.+... + ++++++.+++
T Consensus 158 ~siv~~l~~~gfDGIDiDwEyP~~~~d~~nf~~ll~eLr~~l~~ 201 (433)
T 1w9p_A 158 KTAVKLLQDLGFDGLDIDWEYPENDQQANDFVLLLKEVRTALDS 201 (433)
T ss_dssp HHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcCceeEEEEeccChhHHHHHHHHHHHHHHHHHh
Confidence 456788899999999999865311 1 3678888876
No 444
>2x5e_A UPF0271 protein PA4511; unknown function; HET: CIT; 2.30A {Pseudomonas aeruginosa} PDB: 2xu2_A*
Probab=44.17 E-value=80 Score=25.58 Aligned_cols=171 Identities=11% Similarity=0.068 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCC---C-CCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE-EEccCCCCCCCCccc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTES---S-RTQPIASEDPYTTLKENLIYACAELERHSLTA-LIEPVNQHSVPGYYL 162 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~---~-~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i-~lE~~~~~~~~~~~~ 162 (273)
..+++++++|++-|+ .|..|||.+.. + +..+.++++..+.++..+..|..+++..|+++ .+-||+-- -+...
T Consensus 49 ~~M~~Tv~lA~~~gV-~IGAHPgypDl~GFGRR~m~~s~~el~~~v~YQiGAL~a~a~~~G~~l~hVKPHGAL--YN~~~ 125 (252)
T 2x5e_A 49 LTMRRAVELAVRHGV-SIGAHPAYPDLSGFGRRSLACSAEEVHAMVLYQIGALDAFCRSLGTQVAYVKPHGAL--YNDLV 125 (252)
T ss_dssp HHHHHHHHHHHHTTC-EEEEECCCSCTTTTTCSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCCCEECCCHHH--HHHHT
T ss_pred HHHHHHHHHHHHcCC-eeecCCCCCcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEeEEeccCHHH--HHHHh
Confidence 367789999999887 46778887621 1 22344567778888899999999999999875 55564321 13356
Q ss_pred CCHHHHHHHHHHHhhcCCCceeEe-eecccccccCCChHHHHHhcCCcceeEEeccC---C-----CCCCCCCCCcccHH
Q psy13372 163 SSFRVAERLIRELRAHGISNVQLQ-FDFFNAQRICGDLTHTFGACRDLIGHVQIAQA---P-----DRQEPHARGEIDYA 233 (273)
Q Consensus 163 ~~~~~~~~li~~~~~~~~~~~g~~-~D~~h~~~~~~~~~~~i~~~~~~i~~vHi~d~---~-----~~~~~g~~G~id~~ 233 (273)
.+.+.+..+++....++ |.+-+. +.. ..+..+.+.-++++=.+..==+.|. + .|..||. =.-|..
T Consensus 126 ~d~~~A~av~~av~~~d-~~L~l~~l~~----~~gs~~~~~A~~~Gl~~~~E~FADR~Y~~dG~LvpR~~~gA-vi~D~~ 199 (252)
T 2x5e_A 126 GDDELLRAVLDACAAYR-KGLPLMVLAL----ADNGRELELADEADVPLLFEAFADRAYLPDGRLAPRRLGGA-VHHDPQ 199 (252)
T ss_dssp TCHHHHHHHHHHHHHHC-TTCCEEEECC----SCCHHHHHHHHHHTCCEEEEEESSBCBCTTSSBCCTTSTTS-BCCCHH
T ss_pred hCHHHHHHHHHHHHHhC-CCcEEEEeCC----CCCCHHHHHHHHcCCcEEEEEeeccccCCCCCEecCCCCCC-ccCCHH
Confidence 67788888885556665 443332 210 0122244555556555555455552 1 2445655 333877
Q ss_pred HHHHHHHHcCCCce--------EEEeeec---CCChHHHHHHHHHh
Q psy13372 234 YVFELLAREGYEGY--------VGLEYKP---QGNTKEGLEEFLKT 268 (273)
Q Consensus 234 ~i~~~L~~~gy~g~--------~~lE~~~---~~~~~~~~~~~~~~ 268 (273)
.+.+...+.=-.|. +.++..+ -+|.-.+++ ++++
T Consensus 200 ~~~~rv~~m~~~g~V~t~~G~~i~i~adTiCvHGD~p~Av~-~a~~ 244 (252)
T 2x5e_A 200 RIIEQALAIARGEAFPDYDGNPLRLTADSLCVHGDNPQSLA-VLRR 244 (252)
T ss_dssp HHHHHHHHHHHTCEEECTTSCEEECCCSEEECCSSCHHHHH-TCTT
T ss_pred HHHHHHHHHHHCCCEEecCCCEEeecCCEEEECCCCHHHHH-HHHH
Confidence 77665554322232 3333332 356666666 5554
No 445
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=43.94 E-value=1.5e+02 Score=25.07 Aligned_cols=197 Identities=10% Similarity=0.011 Sum_probs=103.5
Q ss_pred HHHHHHHHHHcCCeeEEEecCCc-cccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHH
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVD-ENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
.+++.+.+++.|+...-+-+... .... ...-...+..++.+.++|+.|.+.|...|.-.-...........+.....+
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~-~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~~~g~~~~~~~~~~~ 123 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNN-NLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYARWNGGIIGQGGPTNA 123 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTT-CTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTEETTEETTTTSSCHH
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCC-CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcccCCcccCCCHHHHH
Confidence 56777777777877765433210 0000 000011234688999999999999998764422211110000001334578
Q ss_pred HHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcc-----cCCHHHHHHHHHHHhhcCCCceeEeeecccccccC----CC
Q psy13372 128 TLKENLIYACAELERHSLTALIEPVNQHSVPGYY-----LSSFRVAERLIRELRAHGISNVQLQFDFFNAQRIC----GD 198 (273)
Q Consensus 128 ~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~-----~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~----~~ 198 (273)
++++.++++++..+...- +.+|.++- |... ..-...+...| ++++..+.-+.++...+.... ..
T Consensus 124 ~~~~~w~~iA~ryk~~~~-Vi~el~NE---P~~~~~~~w~~~~~~~i~aI---R~~~~~~~~Iiv~g~~w~~~~~w~~~~ 196 (340)
T 3qr3_A 124 QFTSLWSQLASKYASQSR-VWFGIMNE---PHDVNINTWAATVQEVVTAI---RNAGATSQFISLPGNDWQSAGAFISDG 196 (340)
T ss_dssp HHHHHHHHHHHHHTTCTT-EEEECCSC---CCSSCHHHHHHHHHHHHHHH---HHTTCCSSCEEEECSGGGBTTTTTTTS
T ss_pred HHHHHHHHHHHHhCCCCc-EEEEecCC---CCCCCHHHHHHHHHHHHHHH---HhhCCCccEEEEeCCcccccccccccc
Confidence 888999999988887643 34887663 2211 11123334445 777755234555544332210 11
Q ss_pred hHHHHHhcC-------CcceeEEeccCCC---CCC-CCCCCcc--cHHHHHHHHHHcCCCceEEEeeecC
Q psy13372 199 LTHTFGACR-------DLIGHVQIAQAPD---RQE-PHARGEI--DYAYVFELLAREGYEGYVGLEYKPQ 255 (273)
Q Consensus 199 ~~~~i~~~~-------~~i~~vHi~d~~~---~~~-~g~~G~i--d~~~i~~~L~~~gy~g~~~lE~~~~ 255 (273)
..+.+..+. .-+..+|.....+ .+. ... ..+ .+..+.+.+++.|.. .++=|+...
T Consensus 197 ~~~~l~~l~dP~~~~~nlvys~H~Y~~~~~sgt~~~~~~-~~i~~~~~~~~~~~~~~g~p-v~iGEfG~~ 264 (340)
T 3qr3_A 197 SAAALSQVTNPDGSTTNLIFDVHKYLDSDNSGTHAECTT-NNIDGAFSPLATWLRQNNRQ-AILTETGGG 264 (340)
T ss_dssp HHHHHTTCCCTTSCCTTEEEEEECCCSTTSSSCSSSCCC-CSTTTTHHHHHHHHHHTTCC-EEEEEECCC
T ss_pred cchhhcccCCCCCCCCCEEEEEEeCCCCCCCCCCcccch-hhHHHHHHHHHHHHHHcCCc-EEEeCccCC
Confidence 223333332 2356789886321 111 111 222 477888889999875 566687653
No 446
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=43.87 E-value=1.3e+02 Score=24.64 Aligned_cols=112 Identities=13% Similarity=0.011 Sum_probs=66.1
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccC-C----CCCchhHHHHHHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFG-Y----AAVKGKESEFRASLEKTIQYAC 98 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~i~~a~ 98 (273)
.+.++.+-+.|.+-|.=-.-.. . .+++.+.++++|..++.++.. + .+. . ....+...+..+.+.+.++.|.
T Consensus 90 ~~va~aAl~aGa~iINdvsg~~-~-d~~m~~~~a~~~~~vVlmh~~-G-~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~ 165 (280)
T 1eye_A 90 ADVARAALQNGAQMVNDVSGGR-A-DPAMGPLLAEADVPWVLMHWR-A-VSADTPHVPVRYGNVVAEVRADLLASVADAV 165 (280)
T ss_dssp HHHHHHHHHTTCCEEEETTTTS-S-CTTHHHHHHHHTCCEEEECCC-C-SCTTCTTSCCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCCC-C-CHHHHHHHHHhCCeEEEEcCC-C-CCcchhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 4455556666766653221111 1 235677889999999987752 1 110 1 0112455666889999999999
Q ss_pred HcCCC--eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 99 ALNIP--AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 99 ~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
+.|++ .|.+-||.- .. ...++..+.|+.+..+ ++.|..+.+
T Consensus 166 ~~Gi~~~~IilDPg~G-f~--------k~~~~n~~ll~~l~~~-~~~g~Pvl~ 208 (280)
T 1eye_A 166 AAGVDPARLVLDPGLG-FA--------KTAQHNWAILHALPEL-VATGIPVLV 208 (280)
T ss_dssp HTTCCGGGEEEECCTT-SS--------CCHHHHHHHHHTHHHH-HTTSSCBEE
T ss_pred HcCCChhhEEEECCCC-cc--------cCHHHHHHHHHHHHHh-hcCCCCEEE
Confidence 99999 799888742 11 1234445555555544 336665544
No 447
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=43.83 E-value=1.3e+02 Score=24.88 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHcCCCeEEecC-C----CCCCC-----------HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWF-P----PVGVT-----------LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESE 85 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~-~----~~~~~-----------~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~ 85 (273)
+.++.++.+.+.|.+..=+.. + +. .+ .+.+.+..+++.=.+..+.. + ++...+.
T Consensus 55 ~~~~~l~~m~~~GV~~~v~~~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~-------l--~~~~~~~ 124 (336)
T 2wm1_A 55 DPEVRIREMDQKGVTVQALSTVPVMFSYW-AKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGT-------L--PMQAPEL 124 (336)
T ss_dssp CHHHHHHHHHHHTCCEEEEECCGGGGCTT-SCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEC-------C--CTTSHHH
T ss_pred CHHHHHHHHHHCCCCEEEECCCchhhccc-CCHHHHHHHHHHHHHHHHHHHHhccCceeEEEe-------C--CCcCHHH
Confidence 789999999999999755542 1 11 11 24455666676654554432 1 1111223
Q ss_pred HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 86 FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 86 ~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
+++.+++++ ..+|++-|.+++...+... .. +.+..+.+.+.++|+.+.+++-.
T Consensus 125 a~~el~~~~---~~~g~~Gv~l~~~~~~~~l-----~d-------~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 125 AVKEMERCV---KELGFPGVQIGTHVNEWDL-----NA-------QELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHH---HTSCCSEEEEESEETTEET-----TC-------GGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHH---HccCCeEEEECCcCCCCCC-----CC-------ccHHHHHHHHHHcCCEEEECCCC
Confidence 344444443 3679999987653221110 11 24667778888899999999843
No 448
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=43.73 E-value=53 Score=24.25 Aligned_cols=97 Identities=15% Similarity=0.080 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccccccCCChHHHHHhcCCcc
Q psy13372 131 ENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNAQRICGDLTHTFGACRDLI 210 (273)
Q Consensus 131 ~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~~~~~~~~~~~i~~~~~~i 210 (273)
+-.+.+.+.|++.|+.+.+-- .+...++++-+ .+.....-|+.++.+-+.-..--+.|.++.+.--+
T Consensus 31 di~~~l~~~a~~~g~~~~~~Q----------SN~EgeLId~I---h~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~ 97 (146)
T 1h05_A 31 ELVALIEREAAELGLKAVVRQ----------SDSEAQLLDWI---HQAADAAEPVILNAGGLTHTSVALRDACAELSAPL 97 (146)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE----------CSCHHHHHHHH---HHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCE
T ss_pred HHHHHHHHHHHHcCCEEEEEe----------eCCHHHHHHHH---HHhhhcCcEEEECchhhccccHHHHHHHHhCCCCE
Confidence 334455677888998765442 33445555555 44422345889998755433344789999998888
Q ss_pred eeEEeccCCCCCC---------------CCCCCcccHHHHHHHHHH
Q psy13372 211 GHVQIAQAPDRQE---------------PHARGEIDYAYVFELLAR 241 (273)
Q Consensus 211 ~~vHi~d~~~~~~---------------~g~~G~id~~~i~~~L~~ 241 (273)
.-||+++...|.+ .|- |.--|..-++.+.+
T Consensus 98 VEVHiSNi~aRE~FRh~S~~s~~a~GvI~G~-G~~gY~lAl~~~~~ 142 (146)
T 1h05_A 98 IEVHISNVHAREEFRRHSYLSPIATGVIVGL-GIQGYLLALRYLAE 142 (146)
T ss_dssp EEEESSCGGGSCGGGGCCSSGGGSSEEEESS-TTHHHHHHHHHHHH
T ss_pred EEEEecCcccccccccccccccceeEEEEec-CHHHHHHHHHHHHH
Confidence 8999998643321 245 65566665555543
No 449
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=43.49 E-value=81 Score=25.65 Aligned_cols=155 Identities=12% Similarity=0.099 Sum_probs=81.6
Q ss_pred ccccccccccccccCHHHHHHHHHH-cC-CCeEEecC-CCCCCCHHHHHHHHHH--cCCeeEEEecCCc--ccc-C-CC-
Q psy13372 8 LAANLTLLFNDLAANYLDKYRVAAE-LG-FRYIESWF-PPVGVTLEQLVAAQTR--HGLKQVLINTEVD--ENF-G-YA- 77 (273)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~-~G-~~~vEl~~-~~~~~~~~~~~~~l~~--~gL~i~~~~~~~~--~~~-~-~~- 77 (273)
++.|..|..... ...+.++.+.. .. .+.+|+.. |. ...+..+.+.++. .++.+.+=+++.. +.+ | .+
T Consensus 6 i~gNwKmn~~~~--~~~~~~~~l~~~~~~~~~vev~v~Pp-~~~L~~v~~~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~ 82 (256)
T 1aw2_A 6 VMGNWKLNGSKE--MVVDLLNGLNAELEGVTGVDVAVAPP-ALFVDLAERTLTEAGSAIILGAQNTDLNNSGAFTGDMSP 82 (256)
T ss_dssp EEEECCBCCCHH--HHHHHHHHHHHHTTTCCSSEEEEECC-GGGHHHHHHHHHHHTCCCEEEESCCCSCSSBSCTTCCCH
T ss_pred EEEEcccccCHH--HHHHHHHHHHhhcccccCeeEEEeCc-HHHHHHHHHHHhCCCCCceEEeccCCCCCCCCccCccCH
Confidence 345665443222 33444444433 21 23466653 32 1456777887776 6777765444321 111 1 00
Q ss_pred -------------CCchhHHH---HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHh
Q psy13372 78 -------------AVKGKESE---FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELE 141 (273)
Q Consensus 78 -------------~~~~~~~~---~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~ 141 (273)
-..|+|.. .-+.+.+-+..|.+.|-..|.+. |.....+. .....+.+.+.|+..++-..
T Consensus 83 ~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GEtleere----~g~t~~vv~~Ql~~~l~~~~ 157 (256)
T 1aw2_A 83 AMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLTPVLCI-GESDAQNE----AGETMAVCARQLDAVINTQG 157 (256)
T ss_dssp HHHHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEE-CCCHHHHH----TTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHcCCCEEEECchhhccccCCCHHHHHHHHHHHHHCCCEEEEEc-CCcHHHHh----cCCHHHHHHHHHHHHHhcCC
Confidence 01223321 22334455777777887766653 54321111 33456666677776665543
Q ss_pred h---CCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 142 R---HSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 142 ~---~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
. ..+.|++||.+-. ...-..|++++.++.
T Consensus 158 ~~~~~~vvIAYEPvWAI--GTG~~Atpe~a~evh 189 (256)
T 1aw2_A 158 VEALEGAIIAYEPIWAI--GTGKAATAEDAQRIH 189 (256)
T ss_dssp GGGGTTCEEEECCTTTT--TSSCCCCHHHHHHHH
T ss_pred HHHcCCEEEEECCHHHh--CCCCCCCHHHHHHHH
Confidence 2 4789999997643 334678899888877
No 450
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=43.39 E-value=1.2e+02 Score=25.89 Aligned_cols=96 Identities=6% Similarity=-0.083 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCC------CCCCCCCC
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTE------SSRTQPIA 121 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~------~~~~~~~~ 121 (273)
+..+..+.+++.|+.-+.+..... .. ..+..... -...++.-+.++..|.+...+++.... .....+
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~-~~-~~~~~~~~---~~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~-- 106 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDL-IP-FDATEAER---EKILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSN-- 106 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHH-SC-TTCCHHHH---HHHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCS--
T ss_pred CHHHHHHHHHHcCCCEEEecCCcc-Cc-ccCCchhh---HHHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCC--
Confidence 477778888999999887764210 00 11111111 234556666677778887666542211 010001
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcE-EEEc
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLT-ALIE 150 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE 150 (273)
.+...+..++.+++.+++|++.|+. +.+.
T Consensus 107 d~~~r~~~i~~~~~~i~~A~~LGa~~vvv~ 136 (394)
T 1xla_A 107 DRSIRRFALAKVLHNIDLAAEMGAETFVMW 136 (394)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCEEEEC
Confidence 3445678899999999999999986 4443
No 451
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Probab=43.31 E-value=41 Score=28.91 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=29.4
Q ss_pred HHHHHHHHHcCCCeEEecCCCCC------CC-------HHHHHHHHHH-------cCCeeEE
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVG------VT-------LEQLVAAQTR-------HGLKQVL 65 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~------~~-------~~~~~~~l~~-------~gL~i~~ 65 (273)
...++.+++.|||||+|.+.+.. .+ ++++++.+++ .++.++.
T Consensus 100 ~si~~~~~~~~fDGiDiDwEyp~~~g~~~~d~~n~~~ll~eLr~~l~~~~~~~~~~~~~Ls~ 161 (377)
T 1vf8_A 100 QSVIRFLRQYNFDGLNLDWQYPGSRGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTS 161 (377)
T ss_dssp HHHHHHHHHTTCCEEEEECSCTTSTTCCTHHHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHHHHHHHcCCCeEEEeeeCCCcCCCCHHHHHHHHHHHHHHHHHHHhhhhccCCCceEEEE
Confidence 46678899999999999976421 11 3677887773 4666664
No 452
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=43.27 E-value=33 Score=26.13 Aligned_cols=60 Identities=15% Similarity=0.070 Sum_probs=37.3
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhc
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVNQHSVPGYYLSSFRVAERLIRELRAH 178 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~ 178 (273)
.++.|++.||+- -+..+.--.++++.+..++.| |+++|+|... .-+.++-=|+ .+.
T Consensus 21 ~A~~ViIvPGYG-----------mAvAqAQ~~v~el~~~L~~~G~~V~faIHPVAG--------RMPGhMNVLL---AEA 78 (184)
T 1d4o_A 21 EANSIIITPGYG-----------LCAAKAQYPIADLVKMLSEQGKKVRFGIHPVAG--------RMPGQLNVLL---AEA 78 (184)
T ss_dssp HCSEEEEEECHH-----------HHHTTTHHHHHHHHHHHHHTTCEEEEEECTTCS--------SSTTHHHHHH---HHH
T ss_pred hCCeEEEECChH-----------HHHHHHHHHHHHHHHHHHHCCCeEEEEeccccc--------cCCCcceEEE---EEe
Confidence 467888877753 122233446778888888888 5789999652 2234555566 665
Q ss_pred CCCc
Q psy13372 179 GISN 182 (273)
Q Consensus 179 ~~~~ 182 (273)
+-|.
T Consensus 79 ~VPY 82 (184)
T 1d4o_A 79 GVPY 82 (184)
T ss_dssp TCCG
T ss_pred cCCH
Confidence 5453
No 453
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=43.25 E-value=1.4e+02 Score=24.79 Aligned_cols=79 Identities=9% Similarity=0.097 Sum_probs=54.1
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCC---HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHH
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGVT---LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACA 99 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~~---~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 99 (273)
+.+.++.++.++-++|.+....+... .-.+...+++.|+++..+-+-.+ . ....++..+..++.
T Consensus 31 l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hltc~~----~---------~~~~l~~~L~~~~~ 97 (310)
T 3apt_A 31 LFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHLTVAG----Q---------SRKEVAEVLHRFVE 97 (310)
T ss_dssp HHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEEECTT----S---------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEeecCC----C---------CHHHHHHHHHHHHH
Confidence 56677778888889999986422121 23345556688999886543111 1 13567788888899
Q ss_pred cCCCeEEecCCCCCC
Q psy13372 100 LNIPAIHIMSGKTES 114 (273)
Q Consensus 100 lG~~~i~~~~G~~~~ 114 (273)
+|++.|.+..|..+.
T Consensus 98 ~GI~niLaLrGD~p~ 112 (310)
T 3apt_A 98 SGVENLLALRGDPPR 112 (310)
T ss_dssp TTCCEEEEECCCCST
T ss_pred CCCCEEEEEcCCCCC
Confidence 999999998888654
No 454
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=43.23 E-value=64 Score=22.47 Aligned_cols=53 Identities=6% Similarity=0.125 Sum_probs=38.2
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEec
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIM 108 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~ 108 (273)
+.+..+.+++.||+.... .. + . ......+..++-++++.+.+...|++++.+.
T Consensus 27 Va~~i~vl~~sGl~y~~~-pm-g----T-~IEGe~devm~vv~~~~e~~~~~G~~RV~t~ 79 (109)
T 1yqh_A 27 VDKAIEVVQQSGVRYEVG-AM-E----T-TLEGELDVLLDVVKRAQQACVDAGAEEVITS 79 (109)
T ss_dssp HHHHHHHHHHSCSEEEEC-SS-C----E-EEEECHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCeEec-CC-c----c-EEEcCHHHHHHHHHHHHHHHHHcCCCeEEEE
Confidence 467778899999998642 11 1 1 2244567788889999999999999987553
No 455
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=43.22 E-value=57 Score=26.71 Aligned_cols=70 Identities=10% Similarity=0.017 Sum_probs=45.7
Q ss_pred CchhHHHHHHHHHHHHHHHHHc-CCCeEEecCCCCCC-CCCCCCCCcchHH--HHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 79 VKGKESEFRASLEKTIQYACAL-NIPAIHIMSGKTES-SRTQPIASEDPYT--TLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~l-G~~~i~~~~G~~~~-~~~~~~~~~~~~~--~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.-+.++.++++.++.-+.+.++ + ..+++- +++.. .++ +...|+ .+.+.|+.+.+++++.|+.++-|++.+
T Consensus 12 sie~~~~~~~~A~~l~~~~~~~~~-~~~v~k-~~f~KapRT----s~~sf~G~g~~~GL~~l~~~~~e~Glp~~te~~d~ 85 (267)
T 2nwr_A 12 AIESEELLLKVGEEIKRLSEKFKE-VEFVFK-SSFDKANRS----SIHSFRGHGLEYGVKALRKVKEEFGLKITTDIHES 85 (267)
T ss_dssp BCSCHHHHHHHHHHHHHHHHHCTT-EEEEEE-CBSCCTTCS----STTSCCCSCHHHHHHHHHHHHHHHCCEEEEECSSG
T ss_pred CcCCHHHHHHHHHHHHHHHHhhcC-ccEEEe-eccccCCCC----CCCCCcCccHHHHHHHHHHHHHhcCCeEEEecCCH
Confidence 3456677888999999988888 5 223333 23322 333 222222 245678888888899999999998764
No 456
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=43.18 E-value=74 Score=28.26 Aligned_cols=63 Identities=21% Similarity=0.098 Sum_probs=44.3
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLIR 173 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~ 173 (273)
+..|..+||..|-+..... . -+.|.++.+.|++.|+.+.+|.+ |.+++.+.+
T Consensus 123 i~ea~~~GAD~ILLi~a~l---------~-------~~~l~~l~~~a~~lgm~~LvEvh-----------~~eE~~~A~- 174 (452)
T 1pii_A 123 IYLARYYQADACLLMLSVL---------D-------DDQYRQLAAVAHSLEMGVLTEVS-----------NEEEQERAI- 174 (452)
T ss_dssp HHHHHHTTCSEEEEETTTC---------C-------HHHHHHHHHHHHHTTCEEEEEEC-----------SHHHHHHHH-
T ss_pred HHHHHHcCCCEEEEEcccC---------C-------HHHHHHHHHHHHHcCCeEEEEeC-----------CHHHHHHHH-
Confidence 4458889999998865433 1 14688889999999999999963 456666655
Q ss_pred HHhhcCCCceeEee
Q psy13372 174 ELRAHGISNVQLQF 187 (273)
Q Consensus 174 ~~~~~~~~~~g~~~ 187 (273)
..+.+-+|++.
T Consensus 175 ---~lga~iIGinn 185 (452)
T 1pii_A 175 ---ALGAKVVGINN 185 (452)
T ss_dssp ---HTTCSEEEEES
T ss_pred ---HCCCCEEEEeC
Confidence 34545566654
No 457
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=43.13 E-value=1.5e+02 Score=25.95 Aligned_cols=78 Identities=10% Similarity=0.082 Sum_probs=34.0
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
.+.++.+++.|... .+..... ...+.+..++ +.|+..+.+................++..++.+...++.|+..|..
T Consensus 90 ~~~~~~i~~~~~~~-~v~~~~r-~~~~di~~A~-~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~ 166 (423)
T 3ivs_A 90 RQDCEAICKLGLKC-KILTHIR-CHMDDARVAV-ETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIE 166 (423)
T ss_dssp HHHHHHHHTSCCSS-EEEEEEE-SCHHHHHHHH-HTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHhcCCCC-EEEEeec-cChhhHHHHH-HcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCE
Confidence 35566777766542 2221111 2344444433 3477655433211000000011223445567777778888877765
Q ss_pred e
Q psy13372 104 A 104 (273)
Q Consensus 104 ~ 104 (273)
.
T Consensus 167 V 167 (423)
T 3ivs_A 167 V 167 (423)
T ss_dssp E
T ss_pred E
Confidence 3
No 458
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=43.08 E-value=1.3e+02 Score=24.24 Aligned_cols=40 Identities=18% Similarity=0.082 Sum_probs=28.7
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 90 LEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
+.+.++.|...|+..+.++. . + .+.+.++.+.++++|+.+
T Consensus 111 ~~~f~~~~~~aG~dgvii~d--l---------~-------~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 111 LEKFCRLSREKGIDGFIVPD--L---------P-------PEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp HHHHHHHHHHTTCCEEECTT--C---------C-------HHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHcCCCEEEECC--C---------C-------HHHHHHHHHHHHHcCCcE
Confidence 36788889999999888741 1 1 144667778889999764
No 459
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=43.05 E-value=41 Score=29.71 Aligned_cols=44 Identities=20% Similarity=0.216 Sum_probs=30.8
Q ss_pred CHHHHHHHHHHcCCCeEEecCC--------CC-------------CCCHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYRVAAELGFRYIESWFP--------PV-------------GVTLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~--------~~-------------~~~~~~~~~~l~~~gL~i~~ 65 (273)
.+.+.|+.++++|+++|+|.-. |+ ..+.+++.+.+.++||.|..
T Consensus 51 gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~Vil 115 (475)
T 2z1k_A 51 GVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVIL 115 (475)
T ss_dssp HHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEE
Confidence 4567789999999999999832 11 11245666667778888774
No 460
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=42.98 E-value=1.6e+02 Score=25.33 Aligned_cols=133 Identities=13% Similarity=0.087 Sum_probs=68.0
Q ss_pred ccccccccccccccCHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCc-cc--cCCCCCchhHH
Q psy13372 8 LAANLTLLFNDLAANYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVD-EN--FGYAAVKGKES 84 (273)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~-~~--~~~~~~~~~~~ 84 (273)
.|.|..++.-.....+++.++.++++|+..|-++.-.+ .. ... ...+. .+....+ ++ .+....+
T Consensus 30 ~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d-~~--~~~---~~~~~---~lqp~~G~yd~~~~~~~~~---- 96 (383)
T 3pzg_A 30 IGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLD-GE--SYC---RDKNT---YMHPEPGVFGVPEGISNAQ---- 96 (383)
T ss_dssp EEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCB-SH--HHH---HHHTE---ESBSBTTBCSSCTTCSSCE----
T ss_pred EEEEecccccCCHHHHHHHHHHHHHcCCCEEEEecccc-cc--ccc---ccccc---ccccCCCcccccccccchH----
Confidence 36665333221112466778888888888888874322 11 000 00110 0100000 00 0011112
Q ss_pred HHHHHHHHHHHHHHHcCCCeEEecCCCCCC-----------C-CCCC--CCCcchHHHHHHHHHHHHHH--------Hhh
Q psy13372 85 EFRASLEKTIQYACALNIPAIHIMSGKTES-----------S-RTQP--IASEDPYTTLKENLIYACAE--------LER 142 (273)
Q Consensus 85 ~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~-----------~-~~~~--~~~~~~~~~~~~~l~~l~~~--------a~~ 142 (273)
+.++.+.++|+.|++.|.+.|......... . .... .+.+...+...+.++.++.. -+.
T Consensus 97 ~~~~~LD~~i~~A~k~GI~viL~l~~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~ 176 (383)
T 3pzg_A 97 NGFERLDYTIAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYRE 176 (383)
T ss_dssp EHHHHHHHHHHHHHHHTCEEEEECCBSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGG
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEccccccccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCC
Confidence 246788999999999999987664221100 0 0000 01334566677777777777 666
Q ss_pred CCcEEEEccCC
Q psy13372 143 HSLTALIEPVN 153 (273)
Q Consensus 143 ~gv~i~lE~~~ 153 (273)
....++.|..+
T Consensus 177 ~p~I~~w~l~N 187 (383)
T 3pzg_A 177 EPTIMAWELAN 187 (383)
T ss_dssp CTTEEEEESCB
T ss_pred CCcEEEEEecC
Confidence 66677777654
No 461
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana}
Probab=42.87 E-value=45 Score=28.41 Aligned_cols=36 Identities=19% Similarity=0.170 Sum_probs=25.9
Q ss_pred HHHHHHHHHcCCCeEEecCCCCC--CC-------HHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVG--VT-------LEQLVAAQTRH 59 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~--~~-------~~~~~~~l~~~ 59 (273)
..+++.+++.|||||+|.+.+.. .+ ++++++.+++.
T Consensus 98 ~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~ 142 (356)
T 3aqu_A 98 DSSIRVARSYGFHGLDLDWEYPSSATEMTNFGTLLREWRSAVVAE 142 (356)
T ss_dssp HHHHHHHHHHTCSEEEEECSCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEeecCChhHHHHHHHHHHHHHHHHHHh
Confidence 45678889999999999976531 11 36777777764
No 462
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=42.69 E-value=1.4e+02 Score=25.45 Aligned_cols=91 Identities=5% Similarity=-0.102 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHcCCeeEEEe----cCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCC-----C-CC
Q psy13372 47 VTLEQLVAAQTRHGLKQVLIN----TEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTE-----S-SR 116 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~-----~-~~ 116 (273)
.+..+..+.+++.|+.-+.++ .+.+ . ..... .+...+..+.++..|.+...++++... . ..
T Consensus 33 ~~~~e~l~~aa~~G~~~vEl~~~~~~p~~----~--~~~e~---~~~~~~l~~~l~~~GL~i~~~~~~~~~~p~~~~g~l 103 (387)
T 1bxb_A 33 LDPVYVVHKLAELGAYGVNLHDEDLIPRG----T--PPQER---DQIVRRFKKALDETGLKVPMVTANLFSDPAFKDGAF 103 (387)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEHHHHSCTT----C--CTTHH---HHHHHHHHHHHHHHTCBCCEEECCCSSSGGGGGCST
T ss_pred CCHHHHHHHHHHhCCCEEEecCcccCCCC----C--Chhhh---HHHHHHHHHHHHHhCCEEEEEecCCCCCccccCCCC
Confidence 467888888999999988876 2211 1 11111 234455666677778876555543321 0 10
Q ss_pred CCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 117 TQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 117 ~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..| .+...+..++.+++.+++|++.|.+..
T Consensus 104 ~~~--d~~~r~~~i~~~~~~i~~A~~LGa~~v 133 (387)
T 1bxb_A 104 TSP--DPWVRAYALRKSLETMDLGAELGAEIY 133 (387)
T ss_dssp TCS--SHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 001 334567889999999999999998743
No 463
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=42.62 E-value=1.2e+02 Score=23.70 Aligned_cols=108 Identities=7% Similarity=-0.020 Sum_probs=60.7
Q ss_pred HHHHHHHHcC-CCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc---
Q psy13372 25 DKYRVAAELG-FRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL--- 100 (273)
Q Consensus 25 ~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l--- 100 (273)
+.++.+.+.+ +|+|=+..... .......+.+.+.|+.++.+.......... .-...+..+..+.+.+...+.
T Consensus 49 ~~i~~l~~~~~vdgii~~~~~~-~~~~~~~~~~~~~~ipvV~~~~~~~~~~~~---~~V~~d~~~~g~~~~~~l~~~~~~ 124 (276)
T 3ksm_A 49 QILSYHLSQAPPDALILAPNSA-EDLTPSVAQYRARNIPVLVVDSDLAGDAHQ---GLVATDNYAAGQLAARALLATLDL 124 (276)
T ss_dssp HHHHHHHHHSCCSEEEECCSST-TTTHHHHHHHHHTTCCEEEESSCCSSSCSS---EEEECCHHHHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHhCCCCEEEEeCCCH-HHHHHHHHHHHHCCCcEEEEecCCCCCCcc---eEEccCHHHHHHHHHHHHHHhcCc
Confidence 4567777788 99997764322 233455566788899999886543211000 001011123445566666666
Q ss_pred -CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC-CcEEE
Q psy13372 101 -NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH-SLTAL 148 (273)
Q Consensus 101 -G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~-gv~i~ 148 (273)
|.+.|.+..|.... ....++++-..+..+++ |+.+.
T Consensus 125 ~G~~~i~~i~~~~~~------------~~~~~R~~gf~~~l~~~~~~~~~ 162 (276)
T 3ksm_A 125 SKERNIALLRLRAGN------------ASTDQREQGFLDVLRKHDKIRII 162 (276)
T ss_dssp TSCEEEEECBCCTTC------------HHHHHHHHHHHHHHTTCTTEEEE
T ss_pred CCCceEEEEEcCCCc------------hhHHHHHHHHHHHHHhCCCcEEE
Confidence 88888887653211 12334444455566777 88765
No 464
>3nzq_A ADC, biosynthetic arginine decarboxylase; alpha-beta protein, structural genomics, PSI-biology, protei structure initiative; 3.10A {Escherichia coli}
Probab=42.61 E-value=2.2e+02 Score=26.67 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=48.7
Q ss_pred HHHHHHHcC-Ce-eEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCC--C-CC--CC
Q psy13372 52 LVAAQTRHG-LK-QVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRT--Q-PI--AS 122 (273)
Q Consensus 52 ~~~~l~~~g-L~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~--~-~~--~~ 122 (273)
+.+.+++.+ +. +..+++..+.. . .+++....+++.+.+.++...++|.+ .+.+. |+++.... . +. +.
T Consensus 253 ll~~l~~~~~L~~l~GLHfHiGSq--i-~d~~~~~~ai~~~~~l~~~L~~~G~~l~~LDiG-GGfgI~Y~~~~~~~~~s~ 328 (666)
T 3nzq_A 253 LVETLREAGRLDSLQLLHFHLGSQ--M-ANIRDIATGVRESARFYVELHKLGVNIQCFDVG-GGLGVDYEGTRSQSDCSV 328 (666)
T ss_dssp HHHHHHHTTCTTTEEEEECCCCSS--C-CCHHHHHHHHHHHHHHHHHHHTTTCCCCEEECC-SCCCCCSSSSCSSSTTCC
T ss_pred HHHHHHhCCCCCCeEEEEEECCCC--C-CCHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeC-CCcCCCcCCccccccccC
Confidence 334445555 54 77777765411 1 35666666666666666666677754 55554 33432211 0 00 01
Q ss_pred cchHHHHHHHHHHHH-HHHhhC---CcEEEEcc
Q psy13372 123 EDPYTTLKENLIYAC-AELERH---SLTALIEP 151 (273)
Q Consensus 123 ~~~~~~~~~~l~~l~-~~a~~~---gv~i~lE~ 151 (273)
.-.++.+++.+.+.+ +.+.+. +.+|.+||
T Consensus 329 ~~~leeya~~I~~~l~~~~~~~~~~~p~Ii~EP 361 (666)
T 3nzq_A 329 NYGLNEYANNIIWAIGDACEENGLPHPTVITES 361 (666)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Confidence 124555555544433 233333 36788887
No 465
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=42.46 E-value=1.5e+02 Score=24.86 Aligned_cols=110 Identities=13% Similarity=0.035 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCCeEE-ecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccc-c-CCCC---C----chhHHHHHHHHHHH
Q psy13372 24 LDKYRVAAELGFRYIE-SWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDEN-F-GYAA---V----KGKESEFRASLEKT 93 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vE-l~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~-~-~~~~---~----~~~~~~~~~~~~~~ 93 (273)
.+.++.+-+.|.+-|- ++.. . .+++.+.++++|..++.++.. + . . .+.. . .+...+..+.+.+.
T Consensus 127 ~~VaeaAl~aGa~iINDVsg~---~-d~~m~~vaa~~g~~vVlmh~~-G-~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~ 200 (318)
T 2vp8_A 127 AQVAKAACAAGADLINDTWGG---V-DPAMPEVAAEFGAGLVCAHTG-G-ALPRTRPFRVSYGTTTRGVVDAVISQVTAA 200 (318)
T ss_dssp HHHHHHHHHHTCCEEEETTSS---S-STTHHHHHHHHTCEEEEECC---------------CCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCC---C-chHHHHHHHHhCCCEEEECCC-C-CCccccccccccccccccHHHHHHHHHHHH
Confidence 3445555555666442 2211 1 246677889999999987742 1 1 1 0000 0 23445567889999
Q ss_pred HHHHHHcCCC--eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 94 IQYACALNIP--AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 94 i~~a~~lG~~--~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
++.|.+.|++ .|++-||..-.. ..++..+.|+.+..+ ++.|..+.+
T Consensus 201 i~~a~~aGI~~~~IilDPG~GF~K---------t~~~nl~ll~~l~~l-~~lg~PvL~ 248 (318)
T 2vp8_A 201 AERAVAAGVAREKVLIDPAHDFGK---------NTFHGLLLLRHVADL-VMTGWPVLM 248 (318)
T ss_dssp HHHHHHTTCCGGGEEEETTTTCCT---------TSHHHHHHHHTHHHH-HTTSSCBEE
T ss_pred HHHHHHcCCChhhEEEcCCCCccc---------CHHHHHHHHHHHHHH-HhCCCCEEE
Confidence 9999999998 799887743111 123334445555443 345655444
No 466
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=42.35 E-value=32 Score=28.43 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 87 RASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 87 ~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+...+.++.++++|++.+++..-.... + +.+.... -.+.|+.+.+++++.|+.+.-|++..
T Consensus 51 ~e~a~~~a~~~k~~ga~~~k~~~~kprt--s-~~~f~g~---g~~gl~~l~~~~~~~Gl~~~te~~d~ 112 (276)
T 1vs1_A 51 WEQVREAALAVKEAGAHMLRGGAFKPRT--S-PYSFQGL---GLEGLKLLRRAGDEAGLPVVTEVLDP 112 (276)
T ss_dssp HHHHHHHHHHHHHHTCSEEECBSSCCCS--S-TTSCCCC---THHHHHHHHHHHHHHTCCEEEECCCG
T ss_pred HHHHHHHHHHHHHhCCCEEEeEEEeCCC--C-hhhhcCC---CHHHHHHHHHHHHHcCCcEEEecCCH
Confidence 3567778888899999999876543211 1 1101111 14778888899999999999999753
No 467
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=42.28 E-value=1.4e+02 Score=24.33 Aligned_cols=95 Identities=15% Similarity=0.133 Sum_probs=55.0
Q ss_pred HHHHHHHHHHcCCCeEEecCCCC-----C--------------CCHH---HHHHHHHHc--CCeeEEEecCCccccCCCC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPV-----G--------------VTLE---QLVAAQTRH--GLKQVLINTEVDENFGYAA 78 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~-----~--------------~~~~---~~~~~l~~~--gL~i~~~~~~~~~~~~~~~ 78 (273)
..+.++.+.+.|.|.||+..|+. . .+.+ ++.+.+++. .+.+..+. + ++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~-Y--~n----- 105 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLL-Y--AN----- 105 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEE-C--HH-----
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe-c--Cc-----
Confidence 55667777889999999998852 0 1111 222223333 34443321 1 01
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
| .. .--+.+.++.+++.|+..+.++- .+ .+ ...++.+.++++|+...
T Consensus 106 -p-v~---~~g~e~f~~~~~~aGvdgvii~D--lp--------~e--------e~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 106 -L-VF---ANGIDEFYTKAQAAGVDSVLIAD--VP--------VE--------ESAPFSKAAKAHGIAPI 152 (267)
T ss_dssp -H-HH---HHCHHHHHHHHHHHTCCEEEETT--SC--------GG--------GCHHHHHHHHHTTCEEE
T ss_pred -H-HH---HhhHHHHHHHHHHcCCCEEEeCC--CC--------Hh--------hHHHHHHHHHHcCCeEE
Confidence 1 11 11346788888999999999852 11 11 24566788889998743
No 468
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=42.26 E-value=55 Score=27.17 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=44.7
Q ss_pred chhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHH--HHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 80 KGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTT--LKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 80 ~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
.+..+..++..++..+.++++|...+.- ++.....++ +...++- +.+.|+.+.+++++.|+.+.-|++..
T Consensus 27 ie~~~~~~e~A~~lk~~~~~~~~~~v~k-~~f~KapRT----s~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~ 98 (288)
T 3tml_A 27 VESEQMTIDTAGRLKEICEKLNVPFIYK-SSYDKANRS----SGKSFRGLGMDEGLRILSEVKRQLGLPVLTDVHSI 98 (288)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTCCEEEE-CBC------------------CHHHHHHHHHHHHHHHCCCEEEECCSG
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEe-cccccCCCC----CCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 4567778889999999999999776643 222221222 2223332 35788889999999999999999764
No 469
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=41.99 E-value=1.8e+02 Score=25.52 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHcCCCeE-EecCC-------CCCCCH----HHHHHHHHHcCCee--EEEecCCccccCCCCCchhHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYI-ESWFP-------PVGVTL----EQLVAAQTRHGLKQ--VLINTEVDENFGYAAVKGKESEFR 87 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~v-El~~~-------~~~~~~----~~~~~~l~~~gL~i--~~~~~~~~~~~~~~~~~~~~~~~~ 87 (273)
.+..+++.+.+.+..-| |+... |..... .-++++.++.++.+ +.++..-+..+.. .....++++
T Consensus 26 ~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w--~~~~~~~am 103 (420)
T 2fiq_A 26 VIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCW--QQENVDAAM 103 (420)
T ss_dssp HHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGG--TTSBHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccc--cccchhhhh
Confidence 45667778888885543 44321 211112 55666777889883 5555422111101 122345678
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhC---------CcEEEEcc-CCCC--
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERH---------SLTALIEP-VNQH-- 155 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~---------gv~i~lE~-~~~~-- 155 (273)
+..+..|..|-..|.+.|-+-......+. | .+-..+...++.++++++|+++ |...+.|. .+..
T Consensus 104 ~~a~e~i~~aI~aGFtSVMiD~S~~~~~~--~--~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~v~~~~~ 179 (420)
T 2fiq_A 104 EKSVELVKAYVRAGFSKIHLDASMSCAGD--P--IPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEA 179 (420)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCSCCBTC--C--SSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC-----
T ss_pred hhHHHHHHHHHHhCCCEEEECCCCCCCCC--C--CCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecCCCCCcc
Confidence 88888999999999999988532211111 1 1112223334467777777775 33355561 0000
Q ss_pred -CCCCcccCCHHHHHHHH
Q psy13372 156 -SVPGYYLSSFRVAERLI 172 (273)
Q Consensus 156 -~~~~~~~~~~~~~~~li 172 (273)
...+...++++++.+++
T Consensus 180 ~~~~~~~~T~PeeA~~Fv 197 (420)
T 2fiq_A 180 SAIQSVHITHVEDAANTL 197 (420)
T ss_dssp -----CCCCCHHHHHHHH
T ss_pred cccCCCCCCCHHHHHHHH
Confidence 00123468999999999
No 470
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=41.94 E-value=1.5e+02 Score=27.16 Aligned_cols=110 Identities=17% Similarity=0.143 Sum_probs=65.9
Q ss_pred CCHHHHHHHHHHc-CCeeE-EEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcc
Q psy13372 47 VTLEQLVAAQTRH-GLKQV-LINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASED 124 (273)
Q Consensus 47 ~~~~~~~~~l~~~-gL~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~ 124 (273)
.+.+.+++.++.+ |-.+. +++. . .+.+.+.++++++.|+..|..|.... . | .
T Consensus 392 ~~~~v~eaal~~~~G~~iINdis~-------~----------~~~~~~~~~~~~~~g~~vV~m~~~~~--~---p---~- 445 (566)
T 1q7z_A 392 QNVDLTERALRAYPGRSLFNSAKV-------D----------EEELEMKINLLKKYGGTLIVLLMGKD--V---P---K- 445 (566)
T ss_dssp CCHHHHHHHHHHCSSCCEEEEEES-------C----------HHHHHHHHHHHHHHCCEEEEESCSSS--C---C---C-
T ss_pred CCHHHHHHHHHhcCCCCEEEECCc-------c----------hhhHHHHHHHHHHhCCeEEEEeCCCC--C---c---C-
Confidence 3467777878775 54443 2211 0 03466788889999999888876331 1 1 1
Q ss_pred hHHHHHHHHHHHHHHHhhCCc------EEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCCceeEeeecccc
Q psy13372 125 PYTTLKENLIYACAELERHSL------TALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGISNVQLQFDFFNA 192 (273)
Q Consensus 125 ~~~~~~~~l~~l~~~a~~~gv------~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~g~~~D~~h~ 192 (273)
..+...+.+.+..+.+.++|| ..++.|.+.. . ..-+.++-+++++.. ++-++.=+++.
T Consensus 446 t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfg--k-----~~~~~l~~~~~~~~~---g~p~l~G~Snk 509 (566)
T 1q7z_A 446 SFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAE--G-----KPVEVLKTIEFISSK---GFNTTVGLSNL 509 (566)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTT--C-----CHHHHHHHHHHHHHT---TCEECCBGGGG
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCc--H-----HHHHHHHHHHHHHhC---CCCEEEEeCcc
Confidence 145578888999999999998 3467887643 1 222233333333444 45566666554
No 471
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=41.62 E-value=1e+02 Score=24.98 Aligned_cols=96 Identities=20% Similarity=0.092 Sum_probs=55.9
Q ss_pred CHHHHHHH---HHHcCCCeEEecCCCC-------------------CCCHHHHHHHHHHcCCeeEEEe-cCCccccCCCC
Q psy13372 22 NYLDKYRV---AAELGFRYIESWFPPV-------------------GVTLEQLVAAQTRHGLKQVLIN-TEVDENFGYAA 78 (273)
Q Consensus 22 ~~~~~l~~---~~~~G~~~vEl~~~~~-------------------~~~~~~~~~~l~~~gL~i~~~~-~~~~~~~~~~~ 78 (273)
+++..++. +.+.|.|-||+..|+. ..+.+.+-+.+++..-++..+- .+ ++
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y--~N----- 98 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVY--YN----- 98 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECC--HH-----
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEec--cC-----
Confidence 56666554 5677999999999852 1223455555555432222221 12 11
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEE
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTA 147 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i 147 (273)
| .. .--+.+.++.|++.|+.-+.++- .+. ++ ..++.+.++++|+.+
T Consensus 99 -~-i~---~~G~e~F~~~~~~aGvdG~IipD--LP~--------eE--------~~~~~~~~~~~Gl~~ 144 (252)
T 3tha_A 99 -L-IF---SYGLEKFVKKAKSLGICALIVPE--LSF--------EE--------SDDLIKECERYNIAL 144 (252)
T ss_dssp -H-HH---HHCHHHHHHHHHHTTEEEEECTT--CCG--------GG--------CHHHHHHHHHTTCEE
T ss_pred -H-HH---HhhHHHHHHHHHHcCCCEEEeCC--CCH--------HH--------HHHHHHHHHHcCCeE
Confidence 1 00 11366789999999999999852 211 11 234567788899874
No 472
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=41.54 E-value=61 Score=22.34 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEe
Q psy13372 49 LEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHI 107 (273)
Q Consensus 49 ~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~ 107 (273)
+.++.+.+++.||+.....+ + . ......+..++-++++.+.+.+.|++++.+
T Consensus 26 Va~~i~~i~~sGl~y~~~pm--~----T-~IEGe~devm~vv~~~~e~~~~~G~~RV~~ 77 (104)
T 1lxj_A 26 VALIEKKIRESPLKSTLHSA--G----T-TIEGPWDDVMGLIGEIHEYGHEKGYVRVHT 77 (104)
T ss_dssp HHHHHHHHHTSSSEEEEETT--E----E-EEEEEHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHcCCCeEeCCC--c----c-EEEcCHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 56788889999999864321 1 1 224457788899999999999999998755
No 473
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=41.32 E-value=85 Score=25.51 Aligned_cols=155 Identities=11% Similarity=0.041 Sum_probs=80.8
Q ss_pred ccccccccccccccCHHHHHHHHHH-c-CCCeEEecC-CCCCCCHHHHHHHHHHcCCeeEEEecCCc--ccc-C-CC---
Q psy13372 8 LAANLTLLFNDLAANYLDKYRVAAE-L-GFRYIESWF-PPVGVTLEQLVAAQTRHGLKQVLINTEVD--ENF-G-YA--- 77 (273)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~-~-G~~~vEl~~-~~~~~~~~~~~~~l~~~gL~i~~~~~~~~--~~~-~-~~--- 77 (273)
++.|..|..... ...+.++.+.. . ..+.+|+.. |. ...+..+.+.++..++.+.+=+++.. +.+ | .+
T Consensus 6 i~gNwKmn~~~~--~~~~~~~~l~~~~~~~~~vev~v~Pp-~~~L~~v~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~m 82 (255)
T 1tre_A 6 VMGNWKLNGSRH--MVHELVSNLRKELAGVAGCAVAIAPP-EMYIDMAKREAEGSHIMLGAQNVNLNLSGAFTGETSAAM 82 (255)
T ss_dssp EEEECCBCCCHH--HHHHHHHHHHHHHTTCCSCEEEEECC-TTTHHHHHHHHTTSSEEEEESCCCSCSSBSCTTCCCHHH
T ss_pred EEEecccccCHH--HHHHHHHHHHhhcccccCeeEEEeCc-HHHHHHHHHHhcCCCCeEeeccCCCCCCCCcCCcCCHHH
Confidence 355665443322 33344444432 2 123566653 32 14677777777666666654333211 110 1 00
Q ss_pred -----------CCchhHHH---HHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhh-
Q psy13372 78 -----------AVKGKESE---FRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELER- 142 (273)
Q Consensus 78 -----------~~~~~~~~---~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~- 142 (273)
-..|+|.. .-+.+.+-+..|.+.|-..|.+. |.....+. .....+.+.+.|+..++-...
T Consensus 83 L~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~Cv-GEtleere----~g~t~~vv~~Ql~~~l~~~~~~ 157 (255)
T 1tre_A 83 LKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCI-GETEAENE----AGKTEEVCARQIDAVLKTQGAA 157 (255)
T ss_dssp HHHHTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEE-CCCHHHHH----TTCHHHHHHHHHHHHHHHHCGG
T ss_pred HHHcCCCEEEECccccccccCCCHHHHHHHHHHHHHCCCEEEEEc-CCcHHHHh----cCCHHHHHHHHHHHHHhcCCHH
Confidence 01223321 22344455777777887766653 54321111 334566666777766655432
Q ss_pred --CCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 143 --HSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 143 --~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
..+.|++||.+-. ...-..|++++.++.
T Consensus 158 ~~~~vvIAYEPvWAI--GTG~~Atpe~a~evh 187 (255)
T 1tre_A 158 AFEGAVIAYEPVWAI--GTGKSATPAQAQAVH 187 (255)
T ss_dssp GGTTCEEEECCGGGS--SSSCCCCHHHHHHHH
T ss_pred HcCcEEEEECCHHHh--CCCCCCCHHHHHHHH
Confidence 4789999997643 333578899888877
No 474
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=41.30 E-value=15 Score=32.22 Aligned_cols=20 Identities=35% Similarity=0.544 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCCeEEecC
Q psy13372 23 YLDKYRVAAELGFRYIESWF 42 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~ 42 (273)
+.++.+.+.++|||+|||+.
T Consensus 170 ~~~aa~~a~~aGfdgveih~ 189 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHA 189 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHhCCCeEEECC
Confidence 66667778899999999994
No 475
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=41.23 E-value=1.3e+02 Score=23.55 Aligned_cols=108 Identities=8% Similarity=-0.052 Sum_probs=61.3
Q ss_pred HHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
.+.++.+...++|+|=+..... .. ....+.+.+.|+.++.+....... ..+ -...+..+..+.+.+...+.|.+
T Consensus 48 ~~~~~~l~~~~vdgiIi~~~~~-~~-~~~~~~~~~~~iPvV~~~~~~~~~-~~~---~V~~d~~~~~~~a~~~L~~~G~~ 121 (272)
T 3o74_A 48 RQLQQLFRARRCDALFVASCLP-PE-DDSYRELQDKGLPVIAIDRRLDPA-HFC---SVISDDRDASRQLAASLLSSAPR 121 (272)
T ss_dssp HHHHHHHHHTTCSEEEECCCCC-SS-CCHHHHHHHTTCCEEEESSCCCTT-TCE---EEEECHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHcCCCEEEEecCcc-cc-HHHHHHHHHcCCCEEEEccCCCcc-ccC---EEEEchHHHHHHHHHHHHHCCCc
Confidence 4556777788999986653321 12 234455777899998876532211 010 01111123445566666678999
Q ss_pred eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEE
Q psy13372 104 AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALI 149 (273)
Q Consensus 104 ~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~l 149 (273)
.|.+..|.... ....+++.-..+..+++|+.+..
T Consensus 122 ~i~~i~~~~~~------------~~~~~R~~gf~~~l~~~~~~~~~ 155 (272)
T 3o74_A 122 SIALIGARPEL------------SVSQARAGGFDEALQGYTGEVRR 155 (272)
T ss_dssp EEEEEEECTTS------------HHHHHHHHHHHHHTTTCCSEEEE
T ss_pred EEEEEecCCCC------------ccHHHHHHHHHHHHHHcCCChhe
Confidence 98887553211 12344555666777888886543
No 476
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=41.15 E-value=1.3e+02 Score=23.67 Aligned_cols=87 Identities=7% Similarity=0.057 Sum_probs=53.0
Q ss_pred CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchH
Q psy13372 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPY 126 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~ 126 (273)
.+..+..+.+++.|+.-+.+........ . .+. ....+.-+.++..|.+...+++... ... ..
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~-~-~~~-------~~~~~~~~~~~~~gl~~~~~~~~~~-~~~-----~~--- 80 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGS-V-TDD-------LNYNQVRNLAEKYGLEIVTINAVYP-FNQ-----LT--- 80 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSS-T-TTT-------CCHHHHHHHHHHTTCEEEEEEEETT-TTS-----CC---
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccc-c-ccc-------cCHHHHHHHHHHcCCeEEechhhhc-cCC-----cH---
Confidence 5678888889999999887754211000 1 011 1233445566778888877764321 110 11
Q ss_pred HHHHHHHHHHHHHHhhCCcE-EEEcc
Q psy13372 127 TTLKENLIYACAELERHSLT-ALIEP 151 (273)
Q Consensus 127 ~~~~~~l~~l~~~a~~~gv~-i~lE~ 151 (273)
+...+.+++.++.|++.|+. +.+.+
T Consensus 81 ~~~~~~~~~~i~~a~~lG~~~v~~~~ 106 (272)
T 2q02_A 81 EEVVKKTEGLLRDAQGVGARALVLCP 106 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcc
Confidence 34567889999999999986 44444
No 477
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=41.11 E-value=57 Score=28.96 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCeEEec-------CCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccC
Q psy13372 90 LEKTIQYACALNIPAIHIM-------SGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPV 152 (273)
Q Consensus 90 ~~~~i~~a~~lG~~~i~~~-------~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~ 152 (273)
+...++..+.+|.+.|+++ ++..+........+...-+...+.|.++++.|.++|+.+.|..|
T Consensus 86 ~~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH 155 (458)
T 3qho_A 86 WEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYH 155 (458)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecc
No 478
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=41.04 E-value=30 Score=30.14 Aligned_cols=95 Identities=11% Similarity=0.017 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHH-----cCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCC----CC
Q psy13372 88 ASLEKTIQYACA-----LNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHS----VP 158 (273)
Q Consensus 88 ~~~~~~i~~a~~-----lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~----~~ 158 (273)
+.+++.++.+++ +|.+++++--|.....++..-+....-+++=..|+.+++++++.|++++|-..+... ++
T Consensus 26 ~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~~~p 105 (397)
T 3a5v_A 26 QLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCGGHI 105 (397)
T ss_dssp HHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTTSCB
T ss_pred HHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCccCCCH
Confidence 566777777777 899999996665531111000000001112225888899999999997664322100 01
Q ss_pred CcccCCHHHHHHHHHHHhhcCCCceeEe
Q psy13372 159 GYYLSSFRVAERLIRELRAHGISNVQLQ 186 (273)
Q Consensus 159 ~~~~~~~~~~~~li~~~~~~~~~~~g~~ 186 (273)
+. ..-..+..+++ .+.+-..|++-
T Consensus 106 g~-~~~~~~~~~~~---~~wGvdyvK~D 129 (397)
T 3a5v_A 106 AS-LGYEDIDAKTW---AKWGIDYLKYD 129 (397)
T ss_dssp CC-TTCHHHHHHHH---HHHTCCEEEEE
T ss_pred HH-HHHHHHHHHHH---HHcCCCEEEEC
Confidence 11 22334445555 66665555543
No 479
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=40.98 E-value=1.4e+02 Score=23.92 Aligned_cols=87 Identities=9% Similarity=-0.006 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCC--CCCCCCCCCCcc
Q psy13372 47 VTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKT--ESSRTQPIASED 124 (273)
Q Consensus 47 ~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~--~~~~~~~~~~~~ 124 (273)
.+..+..+.+++.|+.-+.+.... . ...+ -..+++.-+.++..|.+...++.... +.... .+.
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~---~-~~~~-------~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~----d~~ 81 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASP---L-PFYS-------DIQINELKACAHGNGITLTVGHGPSAEQNLSSP----DPD 81 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTT---G-GGCC-------HHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCS----CHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCcc---c-CCcC-------HHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCC----CHH
Confidence 468888889999999988876431 1 0011 13455666777788988766432211 11111 345
Q ss_pred hHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 125 PYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 125 ~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..+..++.+++.++.|++.|+...
T Consensus 82 ~r~~~~~~~~~~i~~a~~lG~~~v 105 (294)
T 3vni_A 82 IRKNAKAFYTDLLKRLYKLDVHLI 105 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCee
Confidence 677889999999999999998755
No 480
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=40.96 E-value=2e+02 Score=25.79 Aligned_cols=44 Identities=20% Similarity=0.141 Sum_probs=29.9
Q ss_pred CHHHHHH---HHHHcCCCeEEecCCC-CCC-CHHHHHHHHHHcCCeeEE
Q psy13372 22 NYLDKYR---VAAELGFRYIESWFPP-VGV-TLEQLVAAQTRHGLKQVL 65 (273)
Q Consensus 22 ~~~~~l~---~~~~~G~~~vEl~~~~-~~~-~~~~~~~~l~~~gL~i~~ 65 (273)
++++.++ .+.+.|.|.||+..++ .+. +.+++..+++..++.+..
T Consensus 15 ~~~~~~~~~~~~~~~g~D~vElRvD~l~~~~~~~~l~~l~~~~~~PiI~ 63 (523)
T 2o7s_A 15 SIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLF 63 (523)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEEGGGCSSCCHHHHHHHHHHHCSSCEEE
T ss_pred CHHHHHHHHHHhhhcCCCEEEEEEecccccChHHHHHHHHhcCCCcEEE
Confidence 5566555 4457899999999863 212 256788888777777653
No 481
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=40.95 E-value=72 Score=25.55 Aligned_cols=140 Identities=12% Similarity=0.065 Sum_probs=79.3
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHc---------CCeeEEEecCCccccCCCCCchhHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRH---------GLKQVLINTEVDENFGYAAVKGKESEFRASLEK 92 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~---------gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (273)
+.+..++.++++|.|+|-++.... ....+..+.++++ |..+-....+. .|. +.++.
T Consensus 80 ~p~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~--------Tp~------~~l~~ 144 (237)
T 3cu2_A 80 NQLEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPE--------TPI------SELEP 144 (237)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTT--------SCG------GGGTT
T ss_pred CHHHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCC--------ChH------HHHHH
Confidence 568889999999999999987644 4577777888888 77765321110 111 11222
Q ss_pred HHHHHHHcCCCeEEe---cCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHH
Q psy13372 93 TIQYACALNIPAIHI---MSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAE 169 (273)
Q Consensus 93 ~i~~a~~lG~~~i~~---~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~ 169 (273)
.++ ++..|-+ ++|.-+. .......+.++++.++..+.|..+-++--+ .-+.+.+.
T Consensus 145 ~l~-----~~D~vlvMsv~pgfggq---------~f~~~~l~ki~~lr~~~~~~~~~~~I~vdG--------GI~~~~~~ 202 (237)
T 3cu2_A 145 YLD-----QIDVIQLLTLDPRNGTK---------YPSELILDRVIQVEKRLGNRRVEKLINIDG--------SMTLELAK 202 (237)
T ss_dssp TTT-----TCSEEEEESEETTTTEE---------CCHHHHHHHHHHHHHHHGGGGGGCEEEEES--------SCCHHHHH
T ss_pred Hhh-----cCceeeeeeeccCcCCe---------ecChhHHHHHHHHHHHHHhcCCCceEEEEC--------CcCHHHHH
Confidence 222 5667644 5554322 124466777888888887766555555422 23456666
Q ss_pred HHHHHHhh-cCCCceeEeeecccccccCCChHHHHHhc
Q psy13372 170 RLIRELRA-HGISNVQLQFDFFNAQRICGDLTHTFGAC 206 (273)
Q Consensus 170 ~li~~~~~-~~~~~~g~~~D~~h~~~~~~~~~~~i~~~ 206 (273)
+++ +. .+...+ . +|...... |+.+.++.+
T Consensus 203 ~~~---~~~aGad~~--V--vGSaIf~~-d~~~~~~~l 232 (237)
T 3cu2_A 203 YFK---QGTHQIDWL--V--SGSALFSG-ELKTNLKVW 232 (237)
T ss_dssp HHH---HSSSCCCCE--E--ECGGGGSS-CHHHHHHHH
T ss_pred HHH---HhCCCCcEE--E--EeeHHhCC-CHHHHHHHH
Confidence 666 41 332221 1 13333333 677766665
No 482
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=40.87 E-value=1.7e+02 Score=24.83 Aligned_cols=71 Identities=13% Similarity=0.089 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCeEEe-cC--CCCCCCCCCCC--CCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCC
Q psy13372 84 SEFRASLEKTIQYACALNIPAIHI-MS--GKTESSRTQPI--ASEDPYTTLKENLIYACAELERHSLTALIEPVNQ 154 (273)
Q Consensus 84 ~~~~~~~~~~i~~a~~lG~~~i~~-~~--G~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~ 154 (273)
+..++.+.++++.|.+.|...|.- |. |.....+..+. ..+...+.+++.++++++..+.+.-.+++|.++-
T Consensus 87 ~~~l~~ld~vVd~a~~~Gi~vIldlH~~~g~~~g~w~~~~~~~~~~~~~~~~~~w~~iA~~yk~~~~~v~fel~NE 162 (353)
T 3l55_A 87 EAWMMRVKAIVEYAMNAGLYAIVNVHHDTAAGSGAWIKADTDVYAATKEKFKKLWTQIANALADYDQHLLFEGYNE 162 (353)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEECCTTBSSSTTCCBCSCHHHHHHHHHHHHHHHHHHHHHTTTSCTTEEEECCSC
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCcccCCCcccCCccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEEecC
Confidence 346889999999999999987654 32 21111111000 0124567888888888888888765677787653
No 483
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Probab=40.79 E-value=37 Score=30.53 Aligned_cols=37 Identities=11% Similarity=0.143 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCC-C-------CHHHHHHHHHHc
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVG-V-------TLEQLVAAQTRH 59 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~-~-------~~~~~~~~l~~~ 59 (273)
...+++++++.|||||+|.+.+.. . -++++++.+++.
T Consensus 124 i~siv~~~~~~gfDGiDiDwE~p~~~d~~~~~~ll~eLr~~l~~~ 168 (499)
T 1goi_A 124 AQSCVRIMKDYGFDGVNIDWEYPQAAEVDGFIAALQEIRTLLNQQ 168 (499)
T ss_dssp HHHHHHHHHHHTCSEEEEECSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEEecccCChhhHHHHHHHHHHHHHHhhhh
Confidence 346678889999999999976531 1 147888888765
No 484
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=40.76 E-value=92 Score=28.82 Aligned_cols=41 Identities=7% Similarity=0.071 Sum_probs=32.9
Q ss_pred HHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEE
Q psy13372 26 KYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLI 66 (273)
Q Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~ 66 (273)
-++++.+.|+|.|-+.|.....++.++++.++++|-.+..+
T Consensus 198 dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~i~Ii 238 (606)
T 3t05_A 198 DIRFGIKENVDFIAASFVRRPSDVLEIREILEEQKANISVF 238 (606)
T ss_dssp HHHHHHHTTCSEEEETTCCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCeEE
Confidence 36788999999999998765578899999999988654433
No 485
>1l8n_A Alpha-D-glucuronidase; hydrolase; HET: GCW XYP; 1.50A {Geobacillus stearothermophilus} SCOP: c.1.8.10 d.92.2.2 PDB: 1k9d_A* 1mqq_A* 1mqp_A 1mqr_A* 1k9f_A* 1k9e_A*
Probab=40.74 E-value=33 Score=31.95 Aligned_cols=59 Identities=8% Similarity=0.115 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEcc
Q psy13372 88 ASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEP 151 (273)
Q Consensus 88 ~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~ 151 (273)
.+++...++.+.+|+..+++. +++.... .+.-.....++.+.++++..+.+||++.|=.
T Consensus 178 ~R~~dYAR~lASiGINgvvlN--NVNv~~a---~~~~Lt~~~l~~v~~lAd~fRpYGIkv~LSv 236 (679)
T 1l8n_A 178 QRIKDYARLLASVGINAISIN--NVNVHKT---ETKLITDHFLPDVAEVADIFRTYGIKTFLSI 236 (679)
T ss_dssp HHHHHHHHHHHHTTCCEEECS--CSSCCTT---GGGGGSTTTHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhHHHHHHHHhhcCcceEEec--ccccccc---cccccCHHHHHHHHHHHHHHhhccceEEEEE
Confidence 457777888899999999984 3431110 0122233457778899999999999998864
No 486
>3n2o_A ADC, biosynthetic arginine decarboxylase; lyase; HET: PLP; 2.30A {Vibrio vulnificus}
Probab=40.74 E-value=2.3e+02 Score=26.41 Aligned_cols=97 Identities=6% Similarity=-0.020 Sum_probs=49.7
Q ss_pred HHHHHHHHcCC-e-eEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC--eEEecCCCCCCCCC--C-C--CC
Q psy13372 51 QLVAAQTRHGL-K-QVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP--AIHIMSGKTESSRT--Q-P--IA 121 (273)
Q Consensus 51 ~~~~~l~~~gL-~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~--~i~~~~G~~~~~~~--~-~--~~ 121 (273)
++.+.+++.+. . +..+++..+.. . .+++....+++.+.+.++...++|.+ .+.+. |+++.... . + .+
T Consensus 235 ~ll~~l~~~~~L~~l~GLHfHiGSq--i-~d~~~~~~al~~~~~l~~~L~~~G~~l~~LDiG-GGfgI~Y~~~~~~~~~s 310 (648)
T 3n2o_A 235 NVISRLKKENQLDTLQLVHFHLGSQ--M-ANIRDVRNGVNESARFYCELRTLGANITYFDVG-GGLAIDYDGTRSQSSNS 310 (648)
T ss_dssp HHHHHHHHTTCGGGEEEEECCCCSS--B-CCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECC-SCBCCCTTSCCCSSTTS
T ss_pred HHHHHHHhCCCCCceEEEEEECCCC--C-CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEeC-CCcCCCcCCcccccccc
Confidence 33344556664 4 77777765421 1 35566666667777777666677765 45554 33432211 0 0 00
Q ss_pred CcchHHHHHHHHHHHH-HHHhhC---CcEEEEcc
Q psy13372 122 SEDPYTTLKENLIYAC-AELERH---SLTALIEP 151 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~-~~a~~~---gv~i~lE~ 151 (273)
..-.++.+++.+.+.+ +.+.++ +.+|.+||
T Consensus 311 ~~~~leeya~~I~~~l~~~~~~~~~~~p~Ii~EP 344 (648)
T 3n2o_A 311 MNYGLVEYARNIVNTVGDVCKDYKQPMPVIISES 344 (648)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHTCCCCEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEec
Confidence 1134555555544433 233333 35788887
No 487
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A*
Probab=40.67 E-value=52 Score=27.94 Aligned_cols=36 Identities=19% Similarity=0.168 Sum_probs=25.8
Q ss_pred HHHHHHHHHcCCCeEEecCCCCC--CC-------HHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWFPPVG--VT-------LEQLVAAQTRH 59 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~~~~~--~~-------~~~~~~~l~~~ 59 (273)
..+++.+++.|||||+|.+.+.. .+ ++++++.+++.
T Consensus 97 ~siv~~~~~~~fDGiDiDwE~p~~~~d~~n~~~ll~eLr~~l~~~ 141 (353)
T 3alf_A 97 DSSIRLARQLGFHGLDLDWEYPLSAADMTNLGTLLNEWRTAINTE 141 (353)
T ss_dssp HHHHHHHHHHTCSEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEEeeecCChhHHHHHHHHHHHHHHHHHHh
Confidence 45678889999999999976531 11 36777777654
No 488
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=40.66 E-value=1.4e+02 Score=23.78 Aligned_cols=109 Identities=6% Similarity=-0.163 Sum_probs=60.9
Q ss_pred HHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC
Q psy13372 23 YLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI 102 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 102 (273)
..+..+.+...++|+|=+..... .+ ...+.+.+.|+.++.+....... .. +-...+..+..+.+.+...+.|.
T Consensus 55 ~~~~~~~l~~~~vdgiIi~~~~~-~~--~~~~~l~~~~iPvV~i~~~~~~~-~~---~~V~~D~~~~g~~a~~~L~~~G~ 127 (288)
T 3gv0_A 55 MVPIRYILETGSADGVIISKIEP-ND--PRVRFMTERNMPFVTHGRSDMGI-EH---AFHDFDNEAYAYEAVERLAQCGR 127 (288)
T ss_dssp THHHHHHHHHTCCSEEEEESCCT-TC--HHHHHHHHTTCCEEEESCCCSSC-CC---EEEEECHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCccEEEEecCCC-Cc--HHHHHHhhCCCCEEEECCcCCCC-CC---cEEEeCcHHHHHHHHHHHHHCCC
Confidence 34556666778888887653321 11 34456777899998876532111 01 00111112344556666667899
Q ss_pred CeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEc
Q psy13372 103 PAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIE 150 (273)
Q Consensus 103 ~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE 150 (273)
+.|.+..|.... ....+++.-..+.++++|+.+..+
T Consensus 128 ~~I~~i~~~~~~------------~~~~~R~~gf~~~l~~~g~~~~~~ 163 (288)
T 3gv0_A 128 KRIAVIVPPSRF------------SFHDHARKGFNRGIRDFGLTEFPI 163 (288)
T ss_dssp CEEEEECCCTTS------------HHHHHHHHHHHHHHHHTTCEECCC
T ss_pred CeEEEEcCCccc------------chHHHHHHHHHHHHHHcCCCcchh
Confidence 999887654311 122344555556677788876543
No 489
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=40.57 E-value=32 Score=31.94 Aligned_cols=20 Identities=20% Similarity=0.027 Sum_probs=17.5
Q ss_pred HHHHHHHHHHcCCCeEEecC
Q psy13372 23 YLDKYRVAAELGFRYIESWF 42 (273)
Q Consensus 23 ~~~~l~~~~~~G~~~vEl~~ 42 (273)
+.+.|+.++++|+++|+|.-
T Consensus 241 i~~kLdYLk~LGvt~I~L~P 260 (645)
T 4aef_A 241 IKEKIDHLVNLGINAIYLTP 260 (645)
T ss_dssp HHHTHHHHHHHTCCEEEECC
T ss_pred HHHhhHHHHHcCCCEEEECC
Confidence 56778999999999999973
No 490
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=40.53 E-value=34 Score=30.94 Aligned_cols=102 Identities=13% Similarity=0.087 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcC
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALN 101 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG 101 (273)
+.++.++++.+.|+|.|-+.|.....++.++++.++++|-.+..+.-- ...++++++...++.+
T Consensus 209 D~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKI------------E~~eav~nldeIl~~s---- 272 (511)
T 3gg8_A 209 DKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKI------------ENVEGLVNFDEILAEA---- 272 (511)
T ss_dssp HHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEE------------CSHHHHHTHHHHHHHC----
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEE------------CCHHHHHhHHHHHHhC----
Confidence 444555889999999999998755577899999998877443332210 0112344455555432
Q ss_pred CCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 102 IPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 102 ~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
..|-+-.|..+.+ -.++.+...-+++...|+++|..+.
T Consensus 273 -DgimVaRGDLgve--------i~~e~v~~~qk~ii~~~~~~gkpvi 310 (511)
T 3gg8_A 273 -DGIMIARGDLGME--------IPPEKVFLAQKMMIAKCNVVGKPVI 310 (511)
T ss_dssp -SCEEEEHHHHHHH--------SCHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred -CeEEEecchhcCc--------CCHHHHHHHHHHHHHHHHHcCCCeE
Confidence 3444433433222 1244555555666666666665444
No 491
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=40.41 E-value=1.1e+02 Score=26.30 Aligned_cols=74 Identities=16% Similarity=0.060 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcE-EEEccCCCCCCCCc
Q psy13372 82 KESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLT-ALIEPVNQHSVPGY 160 (273)
Q Consensus 82 ~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~-i~lE~~~~~~~~~~ 160 (273)
.+++.++.+...++.|+..|.....-.. . . ..... +.+.++++.+.+.|+. |.|== ..
T Consensus 122 s~~e~l~~~~~~v~~a~~~g~~v~~~~e--d-~-------~r~~~----~~~~~~~~~~~~~Ga~~i~l~D-------T~ 180 (370)
T 3rmj_A 122 KPKQVIEAAVKAVKIAREYTDDVEFSCE--D-A-------LRSEI----DFLAEICGAVIEAGATTINIPD-------TV 180 (370)
T ss_dssp CHHHHHHHHHHHHHHHTTTCSCEEEEEE--T-G-------GGSCH----HHHHHHHHHHHHHTCCEEEEEC-------SS
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEecC--C-C-------CccCH----HHHHHHHHHHHHcCCCEEEecC-------cc
Confidence 4667788888888888888876432211 0 0 11112 3344455555555653 33332 22
Q ss_pred ccCCHHHHHHHHHHHh
Q psy13372 161 YLSSFRVAERLIRELR 176 (273)
Q Consensus 161 ~~~~~~~~~~li~~~~ 176 (273)
-..+|.+..++++.|.
T Consensus 181 G~~~P~~~~~lv~~l~ 196 (370)
T 3rmj_A 181 GYSIPYKTEEFFRELI 196 (370)
T ss_dssp SCCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHH
Confidence 3556778888875543
No 492
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=40.40 E-value=1.6e+02 Score=24.50 Aligned_cols=70 Identities=11% Similarity=-0.013 Sum_probs=44.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHH--HHHHHHHHHHHHhhCCcEEEEccCC
Q psy13372 79 VKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTT--LKENLIYACAELERHSLTALIEPVN 153 (273)
Q Consensus 79 ~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~a~~~gv~i~lE~~~ 153 (273)
..+.++..+++.++.-+.+.+++...+.-. +..+..++ +...++- +.+.|+.+.+++++.|+.+.-|++.
T Consensus 50 sies~e~~~~~A~~lk~~~~~~~~~~v~k~-~f~KapRT----s~~sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D 121 (298)
T 3fs2_A 50 QMETRDHAFEMAGRLKEMTDKLGIGLVYKS-SFDKANRT----SLKAARGIGLEKALEVFSDLKKEYGFPVLTDIHT 121 (298)
T ss_dssp BCCCHHHHHHHHHHHHHHHHHHTCCEEEEC-BCCCCC-------------CCHHHHHHHHHHHHHHHCCCEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCcEEEEc-ccccCCCC----CCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 355677778888888888888996654432 22221222 2223331 3578888889999999999999864
No 493
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=40.16 E-value=1.2e+02 Score=23.11 Aligned_cols=76 Identities=5% Similarity=-0.164 Sum_probs=50.1
Q ss_pred HHHHHHHHh--hCCcEEEEccCCCCCCCCcccCCHHHHHHHHHHHhhcCCC-ceeEeeecccccccCCChHHHHHhcCCc
Q psy13372 133 LIYACAELE--RHSLTALIEPVNQHSVPGYYLSSFRVAERLIRELRAHGIS-NVQLQFDFFNAQRICGDLTHTFGACRDL 209 (273)
Q Consensus 133 l~~l~~~a~--~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~-~~g~~~D~~h~~~~~~~~~~~i~~~~~~ 209 (273)
.+.+.+.|+ +.|+.+.+-- .+...++++-| .+.... .-|+.++.+-+.-..--+.|.++.+.--
T Consensus 40 ~~~l~~~a~~~~~g~~l~~~Q----------SN~EGeLId~I---h~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~P 106 (176)
T 2c4w_A 40 HEIMQTFVKQGNLDVELEFFQ----------TNFEGEIIDKI---QESVGSEYEGIIINPGAFSHTSIAIADAIMLAGKP 106 (176)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE----------CSCHHHHHHHH---HHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSSC
T ss_pred HHHHHHHhccccCCCEEEEEe----------eCcHHHHHHHH---HHhccCCeeEEEECcchhccchHHHHHHHHhCCCC
Confidence 344456777 7887765432 33455566666 555333 5689999876543334578999999888
Q ss_pred ceeEEeccCCCC
Q psy13372 210 IGHVQIAQAPDR 221 (273)
Q Consensus 210 i~~vHi~d~~~~ 221 (273)
+.-||+++...|
T Consensus 107 ~VEVHiSNi~aR 118 (176)
T 2c4w_A 107 VIEVHLTNIQAR 118 (176)
T ss_dssp EEEEESSCGGGS
T ss_pred EEEEEecCcccc
Confidence 889999986444
No 494
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=40.08 E-value=83 Score=28.00 Aligned_cols=98 Identities=8% Similarity=0.006 Sum_probs=56.9
Q ss_pred HHH--HHHHcCCCeEEecCCCCCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCC
Q psy13372 26 KYR--VAAELGFRYIESWFPPVGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIP 103 (273)
Q Consensus 26 ~l~--~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~ 103 (273)
-++ ++.+.|+|+|-+.+.....++.++++.++++|-.+..+.-- ....+++++...++. +.
T Consensus 186 dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~iiaKI------------E~~eav~nldeIl~~-----sD 248 (461)
T 3qtg_A 186 ALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVAVKI------------ETKGAVNNLEELVQC-----SD 248 (461)
T ss_dssp HHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEEEEE------------CSHHHHHTHHHHHHT-----CS
T ss_pred HHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEE------------CCHHHHHhHHHHHHh-----cc
Confidence 356 78899999999998755577899999999988554333210 011234455555543 34
Q ss_pred eEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 104 AIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 104 ~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
.|-+-.|..+.+. .++.+...-+++...++++|..+.
T Consensus 249 gImVaRGDLgvei--------~~e~v~~~Qk~ii~~~~~~gkpvi 285 (461)
T 3qtg_A 249 YVVVARGDLGLHY--------GLDALPIVQRRIVHTSLKYGKPIA 285 (461)
T ss_dssp EEEEEHHHHTTTS--------CTTTHHHHHHHHHHHHHHTTCCEE
T ss_pred cEEEccccccccC--------CHHHHHHHHHHHHHHHHHhCCCEE
Confidence 5555445443321 122444445555666666665544
No 495
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=40.02 E-value=1.6e+02 Score=24.46 Aligned_cols=117 Identities=9% Similarity=-0.074 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHcCCCeEEecCCCCC---CCH----HHHHHHHHHcCCeeEEE-ecCCccccCCCCCchhHHHHHHHHHHH
Q psy13372 22 NYLDKYRVAAELGFRYIESWFPPVG---VTL----EQLVAAQTRHGLKQVLI-NTEVDENFGYAAVKGKESEFRASLEKT 93 (273)
Q Consensus 22 ~~~~~l~~~~~~G~~~vEl~~~~~~---~~~----~~~~~~l~~~gL~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (273)
.+...+++..+.|.++|-+.+.-++ .+. +-++...+..+=++..+ ++ +. . .+...+.
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv--------g~--s-----t~~ai~l 98 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGI--------GY--S-----VDTAIEL 98 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEE--------CS--S-----HHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecC--------Cc--C-----HHHHHHH
Confidence 3667788888999999988864211 122 22333344433233322 21 11 1 1234567
Q ss_pred HHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHHHHHH
Q psy13372 94 IQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVAERLI 172 (273)
Q Consensus 94 i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~~~li 172 (273)
.+.|+++|+..+.+.+...... + .+.++++++.+++ +.++.+.+-| . -+ . -+++...++.
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~------s---~~~l~~~f~~va~---a~~lPiilYn-~----tg-~-l~~~~~~~La 158 (314)
T 3d0c_A 99 GKSAIDSGADCVMIHQPVHPYI------T---DAGAVEYYRNIIE---ALDAPSIIYF-K----DA-H-LSDDVIKELA 158 (314)
T ss_dssp HHHHHHTTCSEEEECCCCCSCC------C---HHHHHHHHHHHHH---HSSSCEEEEE-C----CT-T-SCTHHHHHHT
T ss_pred HHHHHHcCCCEEEECCCCCCCC------C---HHHHHHHHHHHHH---hCCCCEEEEe-C----CC-C-cCHHHHHHHH
Confidence 7788999999887654333111 2 3456677766654 4568888888 2 12 2 4556655655
No 496
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=39.88 E-value=1e+02 Score=23.94 Aligned_cols=69 Identities=16% Similarity=0.111 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCCeEEecC-CC--CCCCHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHc
Q psy13372 24 LDKYRVAAELGFRYIESWF-PP--VGVTLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACAL 100 (273)
Q Consensus 24 ~~~l~~~~~~G~~~vEl~~-~~--~~~~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 100 (273)
.+-+..+.++|.|.+-+.+ +. ...+.++.+++.+...=.+..++++. +.+ ...+.+.+..+
T Consensus 12 ~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfv------n~~----------~~~i~~~~~~~ 75 (205)
T 1nsj_A 12 LEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFV------NEE----------PEKILDVASYV 75 (205)
T ss_dssp HHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEES------SCC----------HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEe------CCC----------HHHHHHHHHhh
Confidence 4556778899999999986 31 12456777777766542333333331 111 23466777888
Q ss_pred CCCeEEec
Q psy13372 101 NIPAIHIM 108 (273)
Q Consensus 101 G~~~i~~~ 108 (273)
+...|.+|
T Consensus 76 ~ld~vQLH 83 (205)
T 1nsj_A 76 QLNAVQLH 83 (205)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99999999
No 497
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=39.71 E-value=1.5e+02 Score=24.09 Aligned_cols=90 Identities=10% Similarity=0.041 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCC------
Q psy13372 48 TLEQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNIPAIHIMSGKTESSRTQPIA------ 121 (273)
Q Consensus 48 ~~~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~------ 121 (273)
+..+..+.+++.|.+-+.+........ .+.. .+..-+.++..|.+.+.++.+..+.....|..
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~----~~~~-------~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~ 98 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAI----GGVP-------MMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKY 98 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEE----TTEE-------HHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSC
T ss_pred CHHHHHHHHHHcCCCEEEeccccCccc----CCCC-------HHHHHHHHHHcCCeEEEEecccccccccCccccccccc
Confidence 788888999999999887754211001 1111 23344556778998887776542111011110
Q ss_pred CcchHHHHHHHHHHHHHHHhhCCcEEE
Q psy13372 122 SEDPYTTLKENLIYACAELERHSLTAL 148 (273)
Q Consensus 122 ~~~~~~~~~~~l~~l~~~a~~~gv~i~ 148 (273)
.+...+...+.+++.+++|++.|++..
T Consensus 99 ~~~~~~~~~~~~~~~i~~A~~lG~~~v 125 (303)
T 3l23_A 99 SKEVTPKIMEYWKATAADHAKLGCKYL 125 (303)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred chhhHHHHHHHHHHHHHHHHHcCCCEE
Confidence 123457889999999999999998744
No 498
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=39.52 E-value=34 Score=26.04 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=28.4
Q ss_pred CCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCC--cEEEEccCC
Q psy13372 101 NIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHS--LTALIEPVN 153 (273)
Q Consensus 101 G~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g--v~i~lE~~~ 153 (273)
.++.|++.||+- -+..+.--.++++.+..++.| |+++|+|..
T Consensus 29 ~A~~ViIVPGYG-----------mAVAqAQ~~v~el~~~L~~~G~~V~faIHPVA 72 (186)
T 2bru_C 29 NSHSVIITPGYG-----------MAVAQAQYPVAEITEKLRARGINVRFGIHPVA 72 (186)
T ss_dssp HCSEEEEECSBH-----------HHHTTTHHHHHHHHHHHHHHCCEEEEEECSSS
T ss_pred hCCeEEEECChH-----------HHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 467888888753 122233345777888888877 579999975
No 499
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=39.52 E-value=1.4e+02 Score=23.49 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCCeEEecCCCCCCCCCCCCCCcchHHHHHHHHHHHHHHHhhCCcEEEEccCCCCCCCCcccCCHHHH
Q psy13372 89 SLEKTIQYACALNIPAIHIMSGKTESSRTQPIASEDPYTTLKENLIYACAELERHSLTALIEPVNQHSVPGYYLSSFRVA 168 (273)
Q Consensus 89 ~~~~~i~~a~~lG~~~i~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~i~lE~~~~~~~~~~~~~~~~~~ 168 (273)
.+...++.++++|.+.|-+.....+... . -+.++++.+.++++|+.+..-... ...+.+..
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~-----~-------~~~~~~~~~~l~~~gl~i~~~~~~-------~~~~~~~~ 91 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNS-----T-------DEQIRAFHDKCAAHKVTGYAVGPI-------YMKSEEEI 91 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTC-----C-------HHHHHHHHHHHHHTTCEEEEEEEE-------EECSHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCC-----C-------HHHHHHHHHHHHHcCCeEEEEecc-------ccCCHHHH
Confidence 4667899999999999998765321110 1 234666777788899886533211 11344444
Q ss_pred HHHHHHHhhcCCCceeEe
Q psy13372 169 ERLIRELRAHGISNVQLQ 186 (273)
Q Consensus 169 ~~li~~~~~~~~~~~g~~ 186 (273)
.+.++..+.++.+.+.+.
T Consensus 92 ~~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 92 DRAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCEEEec
Confidence 444433378887777653
No 500
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=39.50 E-value=1.7e+02 Score=24.61 Aligned_cols=76 Identities=11% Similarity=-0.096 Sum_probs=48.7
Q ss_pred HHHHHHHHHcCCeeEEEecCCccccCCCCCchhHHHHHHHHHHHHHHHHHcCC--CeEEecCCCCCCCCCCCCCCcchHH
Q psy13372 50 EQLVAAQTRHGLKQVLINTEVDENFGYAAVKGKESEFRASLEKTIQYACALNI--PAIHIMSGKTESSRTQPIASEDPYT 127 (273)
Q Consensus 50 ~~~~~~l~~~gL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~--~~i~~~~G~~~~~~~~~~~~~~~~~ 127 (273)
+++...++++|..++.++.. + ++.+++.++.|.++|. +.|++-||..+-. ...+
T Consensus 170 ~~m~~laa~~g~~vVlmh~~---------d-------~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fg--------k~~e 225 (323)
T 4djd_D 170 KSLTAACMVHKHNIIARSPL---------D-------INICKQLNILINEMNLPLDHIVIDPSIGGLG--------YGIE 225 (323)
T ss_dssp HHHHHHHHHHTCEEEEECSS---------C-------HHHHHHHHHHHHTTTCCGGGEEEECCCCCTT--------TTHH
T ss_pred HHHHHHHHHhCCeEEEEccc---------h-------HHHHHHHHHHHHHcCCCHHHEEEeCCCcccc--------CCHH
Confidence 56777788888888776421 1 3567778889999999 6699988764222 2344
Q ss_pred HHHHHHHHHHHHH----hhCCcEEEE
Q psy13372 128 TLKENLIYACAEL----ERHSLTALI 149 (273)
Q Consensus 128 ~~~~~l~~l~~~a----~~~gv~i~l 149 (273)
...+.|+++-..| +..|..+.+
T Consensus 226 ~~l~~l~~ir~~al~~~~~lg~PvL~ 251 (323)
T 4djd_D 226 YSFSIMERIRLGALQGDKMLSMPVIC 251 (323)
T ss_dssp HHHHHHHHHHHHHHHTCGGGCSCBEE
T ss_pred HHHHHHHHHHHHhhcccccCCCCEEE
Confidence 5555666655532 456765443
Done!