Query psy13375
Match_columns 204
No_of_seqs 162 out of 1017
Neff 7.5
Searched_HMMs 46136
Date Fri Aug 16 17:51:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13375.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13375hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01381 MYSc_type_VII Myosin m 100.0 1E-54 2.2E-59 407.0 9.7 189 2-195 363-574 (671)
2 PTZ00014 myosin-A; Provisional 100.0 6.8E-55 1.5E-59 413.9 8.1 189 2-196 463-674 (821)
3 COG5022 Myosin heavy chain [Cy 100.0 9.1E-55 2E-59 418.2 7.3 187 2-195 429-640 (1463)
4 cd01387 MYSc_type_XV Myosin mo 100.0 2.4E-54 5.3E-59 404.8 9.9 190 2-196 362-583 (677)
5 cd01384 MYSc_type_XI Myosin mo 100.0 1.2E-54 2.5E-59 406.5 7.7 189 2-196 368-578 (674)
6 cd01378 MYSc_type_I Myosin mot 100.0 4.5E-54 9.7E-59 403.1 7.9 188 2-196 367-578 (674)
7 cd01382 MYSc_type_VI Myosin mo 100.0 6.5E-54 1.4E-58 404.0 7.0 190 2-196 398-623 (717)
8 cd01380 MYSc_type_V Myosin mot 100.0 1.4E-53 3.1E-58 400.7 7.5 188 2-195 369-596 (691)
9 cd01377 MYSc_type_II Myosin mo 100.0 1.9E-53 4E-58 399.9 8.3 190 2-196 375-598 (693)
10 cd01385 MYSc_type_IX Myosin mo 100.0 4.2E-53 9E-58 397.3 9.5 189 2-195 377-596 (692)
11 cd01383 MYSc_type_VIII Myosin 100.0 4.1E-53 9E-58 396.2 8.1 189 2-196 366-584 (677)
12 smart00242 MYSc Myosin. Large 100.0 1.6E-52 3.4E-57 393.5 8.7 189 2-196 370-581 (677)
13 cd00124 MYSc Myosin motor doma 100.0 5.4E-52 1.2E-56 390.3 7.5 189 2-195 363-584 (679)
14 cd01379 MYSc_type_III Myosin m 100.0 1.5E-51 3.2E-56 384.5 6.4 175 1-196 373-561 (653)
15 cd01386 MYSc_type_XVIII Myosin 100.0 3.2E-50 6.9E-55 380.4 7.5 189 2-195 374-644 (767)
16 PF00063 Myosin_head: Myosin h 100.0 2.7E-50 5.8E-55 380.2 3.8 190 2-196 365-602 (689)
17 KOG0164|consensus 100.0 9.8E-49 2.1E-53 355.5 4.6 190 2-196 376-595 (1001)
18 KOG0162|consensus 100.0 2.9E-47 6.3E-52 346.4 5.5 191 2-199 384-599 (1106)
19 KOG0161|consensus 100.0 2.5E-46 5.5E-51 372.6 4.9 189 2-196 449-673 (1930)
20 KOG0163|consensus 100.0 2.6E-42 5.6E-47 315.0 8.1 189 2-195 452-675 (1259)
21 KOG0160|consensus 100.0 5.3E-41 1.1E-45 315.6 6.8 187 2-195 369-577 (862)
22 KOG4229|consensus 100.0 2.3E-31 4.9E-36 255.8 3.0 194 1-199 427-682 (1062)
23 cd01850 CDC_Septin CDC/Septin. 40.0 33 0.00071 29.1 3.3 31 2-33 64-98 (276)
24 COG2153 ElaA Predicted acyltra 34.9 18 0.00038 28.3 0.8 28 24-51 117-144 (155)
25 PF00735 Septin: Septin; Inte 29.1 68 0.0015 27.4 3.5 31 2-33 64-98 (281)
26 KOG2655|consensus 24.7 67 0.0014 28.8 2.7 32 2-34 80-115 (366)
27 KOG1547|consensus 22.3 1.1E+02 0.0024 26.3 3.4 33 1-34 104-140 (336)
28 COG5019 CDC3 Septin family pro 22.2 1.1E+02 0.0024 27.5 3.5 31 2-33 83-117 (373)
29 PF13983 YsaB: YsaB-like lipop 22.1 26 0.00057 23.7 -0.2 14 5-18 36-50 (77)
No 1
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=1e-54 Score=406.97 Aligned_cols=189 Identities=31% Similarity=0.437 Sum_probs=170.6
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 363 ~IgiLDIfGFE~f~~NsfEQLcINy~NEkLQ~~f~~~vf~~eq~eY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLD 442 (671)
T cd01381 363 SIGVLDIFGFENFDVNSFEQLCINFANENLQQFFVQHIFKLEQEEYNLEHINWQHIEFVDNQDALDLIAIKPLNIMSLID 442 (671)
T ss_pred eEEEEecCCcccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccCccCcHHHHHHHhcCCCCcceech
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC-----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT-----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVSC 138 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~-----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~~ 138 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|++.+ |+.|+|++|+.
T Consensus 443 ee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~ 522 (671)
T cd01381 443 EESKFPKGTDQTMLEKLHSQHGLHSNYLKPKSTQETQFGINHFAGVVFYDTRGFLEKNRDTFSGDLSQLVQSSKNKFLKQ 522 (671)
T ss_pred HhhcCCCCCHHHHHHHHHHHhcCCCCcccCCCCCCCceEEEEecceEeeccCCHHHhccchhhHHHHHHHHhChHHHHHH
Confidence 99999999999987633 44433 24579999999999999999998854 89999999999
Q ss_pred hcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 139 VFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 139 LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
||......+...+...++++++|+.+| ++||++|++|+|||| ||||||+.+.
T Consensus 523 lf~~~~~~~~~~~~k~~tv~~~fk~qL--~~L~~~L~~t~phfI---RCIKPN~~k~ 574 (671)
T cd01381 523 IFQADVEMGAETRKKKPTLSSQFRRSL--DLLMRTLSSCQPFFI---RCIKPNEYKE 574 (671)
T ss_pred HhcccccccccccccCCcHHHHHHHHH--HHHHHHHhcCCCeEE---EEeCcchhhc
Confidence 998665444334455689999999999 999999999999999 9999998864
No 2
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=6.8e-55 Score=413.85 Aligned_cols=189 Identities=23% Similarity=0.204 Sum_probs=168.5
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ |||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 463 ~IGiLDI~GFE~f~~NSfEQLcINy~NEkLQq~F~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~idLie~k~~GIl~lLD 542 (821)
T PTZ00014 463 FIGMLDIFGFEVFKNNSLEQLFINITNEMLQKNFVDIVFERESKLYKDEGISTEELEYTSNESVIDLLCGKGKSVLSILE 542 (821)
T ss_pred eEEEEecccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCcHHHHHHHhcCCccHHHHHH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC-----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT-----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVSC 138 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~-----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~~ 138 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|+|.+ |+.|+|++|+.
T Consensus 543 Eec~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~n~~i~~ 622 (821)
T PTZ00014 543 DQCLAPGGTDEKFVSSCNTNLKNNPKYKPAKVDSNKNFVIKHTIGDIQYCASGFLFKNKDVLRPELVEVVKASPNPLVRD 622 (821)
T ss_pred HHhCCCCCCHHHHHHHHHHHhcCCCCccCCCCCCCCceEEEEeceeeeeccCcHHHhccccchHHHHHHHHhCccHHHHH
Confidence 99999999999987633 33433 24579999999999999999998854 89999999999
Q ss_pred hcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 139 VFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 139 LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
||....... +.....++++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 623 lf~~~~~~~-~~~~k~~tv~s~Fk~qL--~~Lm~~L~~t~phfI---RCIKPN~~k~p 674 (821)
T PTZ00014 623 LFEGVEVEK-GKLAKGQLIGSQFLNQL--DSLMSLINSTEPHFI---RCIKPNENKKP 674 (821)
T ss_pred Hhccccccc-ccccCCCcHHHHHHHHH--HHHHHHHhccCCeEE---EEeCcCcccCc
Confidence 997543221 22234578999999999 999999999999999 99999998753
No 3
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=9.1e-55 Score=418.23 Aligned_cols=187 Identities=30% Similarity=0.389 Sum_probs=168.4
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhc-CcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~-~p~Gll~lL 78 (204)
+||||||||||.|+ ||||||||||||+|||.|++|+|..||++|.+|||+|.+|+|.||++|+|||++ .|.|||++|
T Consensus 429 fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslL 508 (1463)
T COG5022 429 FIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLL 508 (1463)
T ss_pred ceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhh
Confidence 69999999999999 999999999999999999999999999999999999999999999999999997 478999999
Q ss_pred cccccccCCCCCceeeee-----------eecCC----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHH
Q psy13375 79 DDQANWSRGNPMVSCVFW-----------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMV 136 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~-----------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v 136 (204)
||||.+|.++|++|..++ |.+++ ++...||||.|+|++.||+++|+|.+ +..|+|++|
T Consensus 509 DEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~v 588 (1463)
T COG5022 509 DEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFV 588 (1463)
T ss_pred cHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHH
Confidence 999999999999987643 22222 23469999999999999999998854 899999999
Q ss_pred HhhcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 137 SCVFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 137 ~~LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
+.||.......+ +...+|++++|+.++ .+||++|++|+|||| ||||||.++.
T Consensus 589 s~Lf~~~~~~~~--K~~~pT~gs~~K~sl--~~Lm~tl~sTqphyI---RCIkPN~~K~ 640 (1463)
T COG5022 589 STLFDDEENIES--KGRFPTLGSRFKESL--NSLMSTLNSTQPHYI---RCIKPNEEKS 640 (1463)
T ss_pred HHhhhhhhhccc--cCCCCcHHHHHHHHH--HHHHHHHHhcCCcee---EeeCCCcccC
Confidence 999985544333 367899999999999 999999999999999 9999999874
No 4
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=2.4e-54 Score=404.81 Aligned_cols=190 Identities=33% Similarity=0.427 Sum_probs=168.1
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|. |||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 362 ~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~eq~eY~~EgI~~~~i~f~dN~~~ldLi~~kp~Gil~lLd 441 (677)
T cd01387 362 SIAILDIYGFEDLSFNSFEQLCINYANENLQYLFNKIVFQEEQEEYIREQLDWTEIAFADNQPVINLISLKPYGILRILD 441 (677)
T ss_pred eEEEEecCccccCCCCCHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCcCChHHHHHHHhcCCCchHHHHH
Confidence 69999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcCChHHHhh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMVSCV 139 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v~~L 139 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|++. +|+.|+|++|++|
T Consensus 442 ee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~l 521 (677)
T cd01387 442 DQCCFPQATDHTFLQKCHYHHGANPLYSKPKMPLPEFTIKHYAGKVTYQVHKFLDKNHDQVRQDVLDLFVSSRTRVVAHL 521 (677)
T ss_pred HHhcCCCCchHHHHHHHHHhccCCccccCCCCCCCeeEEEEeCceeeecCCChHHhccchhhHHHHHHHHhCCcHHHHHH
Confidence 99999999999987532 44443 2457999999999999999999875 4889999999999
Q ss_pred cccccC--------C-Cc-cccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 140 FWMIKP--------T-GR-GETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 140 F~~~~~--------~-~~-~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
|..... . +. .++...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 522 f~~~~~~~~~~~~~~~s~~~~~~~~~tv~~~f~~sL--~~L~~~l~~t~phfI---RCIKPN~~k~~ 583 (677)
T cd01387 522 FSSHAAQRAPKRLGKSSSGTRLYKAHTVAAKFQQSL--LDLVEKMERCNPLFV---RCLKPNHKKEP 583 (677)
T ss_pred HhhhhcccccccccCCCccccccCCCcHHHHHHHHH--HHHHHHHhcCCCeEE---EEECCCCcCCc
Confidence 974321 0 11 12234578999999999 999999999999999 99999998743
No 5
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=1.2e-54 Score=406.48 Aligned_cols=189 Identities=29% Similarity=0.350 Sum_probs=168.9
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 368 ~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~eq~eY~~EgI~~~~i~~~DN~~~ldLie~~~~Gil~lLd 447 (674)
T cd01384 368 LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLD 447 (674)
T ss_pred EEEEEecccccccCcCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccCCChHHHHHHHhcCCccHHHHHH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcCChHHHhh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMVSCV 139 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v~~L 139 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|++. +|+.|+|++|+.|
T Consensus 448 ee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~n~~i~~l 527 (674)
T cd01384 448 EACMFPKSTHETFAQKLYQTFKDHKRFEKPKLSRTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGL 527 (674)
T ss_pred HHHcCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCCeeEEEEecceeeecCCCHHHhcCCcccHHHHHHHHhCchHHHHHH
Confidence 99999999999987643 33433 3457999999999999999999874 4899999999999
Q ss_pred cccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 140 FWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 140 F~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
|......+ ..+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 528 f~~~~~~~-~~~~k~~tv~~~fk~~L--~~L~~~L~~t~~hfI---RCIKPN~~k~p 578 (674)
T cd01384 528 FPPLPEET-SKSSKFSSIGSRFKQQL--QSLMETLSTTEPHYI---RCIKPNNVLKP 578 (674)
T ss_pred hccccccc-ccccccccHHHHHHHHH--HHHHHHHhccCCeEE---EEeCCCcccCC
Confidence 97544332 22334578999999999 999999999999999 99999998743
No 6
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=4.5e-54 Score=403.11 Aligned_cols=188 Identities=26% Similarity=0.302 Sum_probs=167.2
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhc-CcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~-~p~Gll~lL 78 (204)
+||||||||||+|+ |||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||++ +|.|||++|
T Consensus 367 ~IgILDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~~F~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~~~~~Gil~lL 446 (674)
T cd01378 367 VIGVLDIYGFEIFQKNSFEQFCINYVNEKLQQIFIELTLKAEQEEYVREGIKWTPIEYFNNKIVCDLIEGKRPPGIFSIL 446 (674)
T ss_pred eEEEEecccccccccccHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCcCChHHHHHHHhcCCCcchHHHH
Confidence 69999999999999 999999999999999999999999999999999999999999999999999999 899999999
Q ss_pred ccccccc-CCCCCceeeeeee---------cCC----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHH
Q psy13375 79 DDQANWS-RGNPMVSCVFWMI---------KPT----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVS 137 (204)
Q Consensus 79 Dee~~~p-~~~d~~f~~~~~~---------k~~----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~ 137 (204)
||||++| +++|++|++++.. ++. .+.+.||||+|+|++.||+++|++.+ |+.|+|++|+
T Consensus 447 dee~~~p~~~tD~~~~~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~n~~i~ 526 (674)
T cd01378 447 DDVCATPHEGTDQTFLEKLNKKFSSHPHSDHFSSGSDEFRIKHYAGDVTYSVEGFCDKNKDTLFKDLIELMQSSSNPFLR 526 (674)
T ss_pred HHHHcCCCCCChHHHHHHHHHHhccCCCCCCCCCCCCcEEEEEeceeeeecCcCHHHhhcchhhHHHHHHHHhCchHHHH
Confidence 9999999 9999998864421 121 23469999999999999999998854 8999999999
Q ss_pred hhcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 138 CVFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 138 ~LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
.||........ +...++++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 527 ~lf~~~~~~~~--~~~~~tv~~~fk~qL--~~Lm~~L~~t~phfI---RCIKPN~~k~p 578 (674)
T cd01378 527 SLFPEKSDADS--KKRPTTAGFKIKTSA--NALVETLMKCTPHYI---RCIKPNETKSP 578 (674)
T ss_pred HHhcccccccc--cCCCCcHHHHHHHHH--HHHHHHHHccCCeEE---EEECCCccCCc
Confidence 99975433222 224578999999999 999999999999999 99999998753
No 7
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=6.5e-54 Score=404.01 Aligned_cols=190 Identities=23% Similarity=0.276 Sum_probs=166.7
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +||||||||||||||++|++++|..|+++|.+|||+|.+++|.||++|+|||+++|.|||++||
T Consensus 398 ~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~if~~Eq~~Y~~EgI~~~~i~~~DN~~~ldLie~k~~Gil~lLD 477 (717)
T cd01382 398 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQREGLGVNEVHYVDNQDCIDLIEAKLNGILDILD 477 (717)
T ss_pred EEEEEeccccccCCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccccHHHHHHHhcCCccHHHHhH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecC--------------CCCCccccCCCeeecCCCcceeehhH-------HHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKP--------------TGRGETQWSPLVEGKPNGLLCVLDDQ-------ANW 129 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~--------------~~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~ 129 (204)
|||++|+++|++|+.++ +.+| ..+.+.||||+|+|++.||+++|++. +|+
T Consensus 478 ee~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNkD~l~~~~~~ll~ 557 (717)
T cd01382 478 EENRLPQPSDQHFTSVVHQKHKDHFRLTIPRKSKLAVHRNLRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLIC 557 (717)
T ss_pred HHhcCCCCCHHHHHHHHHHHhcCCcCccCCCccccccccccCCCCCEEEEecceeEeecCCChHHhcCccccHHHHHHHH
Confidence 99999999999987533 1122 12457999999999999999999864 489
Q ss_pred hcCChHHHhhcccccCCC----ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 130 SRGNPMVSCVFWMIKPTG----RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 130 ~S~n~~v~~LF~~~~~~~----~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
.|+|++|+.||....... +..+....+++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 558 ~S~n~~i~~lf~~~~~~~~~~~~~~k~~~~tv~~~fk~qL--~~Lm~~L~~t~~hfI---RCIKPN~~k~p 623 (717)
T cd01382 558 ESKDKFLRSLFESSTNNNDTKQKAGKLSFISVGNKFKTQL--NLLLEKLRSTGSSFI---RCIKPNLKMVS 623 (717)
T ss_pred hCchHHHHHHhccccccccccccccCccCccHHHHHHHHH--HHHHHHHhccCCeee---eeeCCCcccCC
Confidence 999999999997543211 111223468899999999 999999999999999 99999998744
No 8
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=1.4e-53 Score=400.66 Aligned_cols=188 Identities=33% Similarity=0.463 Sum_probs=165.5
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|+.++|.||++|+|||++ |.|||++||
T Consensus 369 ~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~iF~~eq~~Y~~EgI~~~~i~f~DN~~~ldLie~-~~Gil~lLd 447 (691)
T cd01380 369 FIGVLDIYGFETFEKNSFEQFCINYANEKLQQQFNQHVFKLEQEEYLKEGIEWTFIDFYDNQPCIDLIES-KLGILSLLD 447 (691)
T ss_pred eEEEEecCcccccCCCCHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCHHHHHHHhC-CCchHHHhH
Confidence 69999999999999 999999999999999999999999999999999999999999999999999996 589999999
Q ss_pred ccccccCCCCCceeeee-----------eecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcCChHHH
Q psy13375 80 DQANWSRGNPMVSCVFW-----------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMVS 137 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~-----------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v~ 137 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|++. +|+.|+|++|+
T Consensus 448 ee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~i~ 527 (691)
T cd01380 448 EECRLPKGSDESWAQKLYNKLPKKKNPHFEKPRFGQTSFTVKHFADDVEYDVDGFLEKNRDTVSDEHLDVLKASKNPFLK 527 (691)
T ss_pred HhhcCCCCChHHHHHHHHHHhcccCCCCccCCCCCCCeeEEEEccCCcccccccHHHhccccccHHHHHHHHhCccHHHH
Confidence 99999999999987533 33333 2357999999999999999999884 48999999999
Q ss_pred hhcccccCC----------------CccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 138 CVFWMIKPT----------------GRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 138 ~LF~~~~~~----------------~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
.||...... .+..+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.
T Consensus 528 ~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~qL--~~L~~~L~~t~phfI---RCIKPN~~k~ 596 (691)
T cd01380 528 EVLDAAELASSSSSSAKSKPAAKRPPKRAKQHKPTVGSQFKSSL--IELMSTLNSTNPHYI---RCIKPNDEKK 596 (691)
T ss_pred HHhhhhcccccccccccccccccccccccccCCCcHHHHHHHHH--HHHHHHHhccCCeEE---EEeCCCcccC
Confidence 999743211 0112345678999999999 999999999999999 9999999875
No 9
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=1.9e-53 Score=399.95 Aligned_cols=190 Identities=27% Similarity=0.346 Sum_probs=166.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|..++| .||++|+|||+++|.|||++|
T Consensus 375 ~IgiLDIfGFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~~~~dn~~~ldLie~~~~Gil~lL 454 (693)
T cd01377 375 FIGVLDIAGFEIFDFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQPTIDLIEKNPMGILSLL 454 (693)
T ss_pred eEEEEecccccccCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCCcHHHHHHHhcCCCchHhhh
Confidence 69999999999999 999999999999999999999999999999999999999999 599999999999999999999
Q ss_pred cccccccCCCCCceeeeee-----------ecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcCChHH
Q psy13375 79 DDQANWSRGNPMVSCVFWM-----------IKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMV 136 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~~-----------~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v 136 (204)
||||++|+++|++|+.++. .++. .+.+.||||.|+|++.||+++|++. +|+.|+|++|
T Consensus 455 dee~~~~~~tD~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i 534 (693)
T cd01377 455 DEECVFPKATDKTFVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPLNDNVVGLLKKSSDKLV 534 (693)
T ss_pred hHHhcCCCCCHHHHHHHHHHHhcCCCcccccCCCCCCCcEEEEeeceeEeeccccHHHhccccccHHHHHHHHhCchHHH
Confidence 9999999999999876431 1111 2346999999999999999999875 4899999999
Q ss_pred HhhcccccCC---------CccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 137 SCVFWMIKPT---------GRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 137 ~~LF~~~~~~---------~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+.||...... .+.++...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 535 ~~lf~~~~~~~~~~~~~~~~~~~~~~~~tv~~~F~~qL--~~L~~~L~~t~~hfI---RCIKPN~~k~p 598 (693)
T cd01377 535 AELFKDYAEASGDGGGGGGKKKKGGSFRTVSQLYKEQL--NKLMTTLRSTNPHFV---RCIIPNEEKKP 598 (693)
T ss_pred HHHhhhhcccccccccccCCCCcCCccccHHHHHHHHH--HHHHHHHhccCCeEE---EEeCcCccCCC
Confidence 9999743221 1122223478999999999 999999999999999 99999998743
No 10
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=4.2e-53 Score=397.28 Aligned_cols=189 Identities=32% Similarity=0.434 Sum_probs=166.4
Q ss_pred ccceeecCCCCCcc---hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG---SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~---~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||||||+|+ +||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++|
T Consensus 377 ~IgiLDI~GFE~f~~~NsfEQLcINyaNEkLQ~~f~~~vf~~eq~~Y~~EgI~~~~i~f~dN~~~ldLie~k~~Gil~lL 456 (692)
T cd01385 377 SIGVLDIFGFEDFGRCNSFEQLCINYANEQLQYYFNQHIFKLEQEEYQGEGITWTNIEYTDNVGCIQLFSKKPTGLLYLL 456 (692)
T ss_pred EEEEEecCccccCCCCCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHh
Confidence 69999999999986 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeee---------eecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcCChHHHh
Q psy13375 79 DDQANWSRGNPMVSCVFW---------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMVSC 138 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~---------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v~~ 138 (204)
||||++|+++|++|+.++ +.+|+ .+.+.||||.|+|++.||+++|++. +|+.|+|++|+.
T Consensus 457 dee~~~p~~td~~~l~kl~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~ 536 (692)
T cd01385 457 DEESNFPHATSQTLLAKFNQQHKDNKYYEGPQVKEPAFIIQHYAGKVKYQIKDFREKNMDLMRQDIVALLKGSDSSYVRE 536 (692)
T ss_pred HHHhcCCCCCHHHHHHHHHHHhCCCCCccCCCCCCCeEEEEEecceeeecCCCHHHhccccccHHHHHHHHhCccHHHHH
Confidence 999999999999987532 34443 2357999999999999999999885 489999999999
Q ss_pred hcccccCCC--------ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 139 VFWMIKPTG--------RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 139 LF~~~~~~~--------~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
||.....+. ..+....+|++++|+.+| ++||++|++|+|||| ||||||+.+.
T Consensus 537 lf~~~~~~~~~~~~~~~~~~~~~~~tV~~~f~~~L--~~L~~~L~~t~~hfI---RCIKPN~~k~ 596 (692)
T cd01385 537 LIGMDPVAVFRWAVLRAAFRAMAAPSVSAQFQTSL--NKLMETLGKAEPFFI---RCIKSNAEKI 596 (692)
T ss_pred HhccCcccccccccccccccCccCCcHHHHHHHHH--HHHHHHHhccCCeEE---EEeCCCCccC
Confidence 997432111 112223478999999999 999999999999999 9999999874
No 11
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=4.1e-53 Score=396.23 Aligned_cols=189 Identities=30% Similarity=0.420 Sum_probs=164.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ |||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 366 ~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vF~~EqeeY~~EgI~~~~i~f~dN~~~ldLie~kp~Gil~lLd 445 (677)
T cd01383 366 SISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFEDNQECLDLFEKKPLGLLSLLD 445 (677)
T ss_pred eEEEeeccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccCCCcHHHHHHHhcCCccHHHHhH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecC--CCCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHHhhcc
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKP--TGRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVSCVFW 141 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~--~~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~~LF~ 141 (204)
|||++|+++|++|++++ +.++ ..+.+.||||+|+|++.||+++|++.+ |++|+|++++ +|.
T Consensus 446 ee~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~~~-~f~ 524 (677)
T cd01383 446 EESTFPNATDLTFANKLKQHLKTNSCFRGERGGAFTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQ-LFA 524 (677)
T ss_pred HHHcCCCCCHHHHHHHHHHHhCCCCCCCCCCCCceEEEEeccceeecCCChHHhccccccHHHHHHHHhCchHHHH-HHH
Confidence 99999999999988644 2222 234579999999999999999998854 8889999876 664
Q ss_pred ccc-C----CC-----ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 142 MIK-P----TG-----RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 142 ~~~-~----~~-----~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
... . .+ .......+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 525 ~~~~~~s~~~~~~~~~~~~~~~~~tv~~~fk~qL--~~L~~~L~~t~phfI---RCIKPN~~k~p 584 (677)
T cd01383 525 SSMLIQSPVVGPLYVASAADSQKLSVGTKFKGQL--FKLMQQLENTTPHFI---RCIKPNNKQLP 584 (677)
T ss_pred hhhhccccccccccccccccccCcchHHHHHHHH--HHHHHHHhCCCCeEE---EEECcccccCc
Confidence 221 0 00 111234578999999999 999999999999999 99999998753
No 12
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=1.6e-52 Score=393.46 Aligned_cols=189 Identities=33% Similarity=0.458 Sum_probs=169.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|. +||||||||||||||++|++++|..|+++|.+|||+|+.++|.||++|+|||+++|.|||++||
T Consensus 370 ~IgiLDifGFE~f~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dN~~~l~li~~~~~Gil~lLd 449 (677)
T smart00242 370 FIGVLDIYGFEIFEVNSFEQLCINYANEKLQQFFNQHVFKLEQEEYEREGIDWTFIDFFDNQDCIDLIEKKPPGILSLLD 449 (677)
T ss_pred EEEEEecccccccccCCHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHHHHcCCccHHHHHH
Confidence 69999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC-----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT-----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVSC 138 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~-----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~~ 138 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|++.+ |+.|+|++|+.
T Consensus 450 ee~~~~~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~H~AG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~ 529 (677)
T smart00242 450 EECRFPKATDQTFLEKLNQTHEKHPHFSKPRKKGRTEFIIKHYAGDVTYDVTGFLEKNKDTLFKDLIELLQSSKNPLIAS 529 (677)
T ss_pred HHhcCCCCCHHHHHHHHHHHhcCCCCccCCCCCCCCeEEEEecceeEeecCccHHHHccchhhHHHHHHHHhCCcHHHHH
Confidence 99999999999987633 44442 23579999999999999999998754 89999999999
Q ss_pred hcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 139 VFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 139 LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
||....... ..+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 530 lf~~~~~~~-~~~~~~~tv~~~fk~~L--~~L~~~l~~t~~hfI---RCIKPN~~k~~ 581 (677)
T smart00242 530 LFPSGESNA-GSKKRFRTVGSQFKESL--NKLMDTLNSTNPHFI---RCIKPNEEKKP 581 (677)
T ss_pred Hhccccccc-cccCCCCcHHHHHHHHH--HHHHHHHhccCCeEE---EEeCCCcccCc
Confidence 997554321 22345679999999999 999999999999999 99999998753
No 13
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=5.4e-52 Score=390.31 Aligned_cols=189 Identities=33% Similarity=0.433 Sum_probs=167.5
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 363 ~IgiLDi~GFE~f~~NsfEQLcINy~NEkLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~ldli~~~~~Gi~~lLd 442 (679)
T cd00124 363 FIGILDIFGFEIFEKNSFEQLCINYANEKLQQFFNQHVFKLEQEEYQEEGIDWESIDFTDNQEVIDLIEKKPGGLLSLLD 442 (679)
T ss_pred eeeEEeccccccCCCCCHHHHhcccchHHHHHHHHHHHHHHHHHHHHhcCCCccCCcCCCCHHHHHHHhcCCCcHHHHHH
Confidence 69999999999998 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeeee---------ec-C----CCCCccccCCCeeecCCCcceeehhH-------HHhhcCChHHHh
Q psy13375 80 DQANWSRGNPMVSCVFWM---------IK-P----TGRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMVSC 138 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~~---------~k-~----~~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v~~ 138 (204)
|||++|+++|++|++++. .+ + ..+.+.||||.|+|++.||+++|++. +|+.|+|++|+.
T Consensus 443 ee~~~~~~~d~~~~~kl~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~ 522 (679)
T cd00124 443 EECLFPKGTDETFLEKLNNKLKSNNAFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPELVSLLKSSSNPFIRE 522 (679)
T ss_pred HHhCCCCCCHHHHHHHHHHHhcCCcccccCCCCCCCceEEEeeceeEEecCCCHHHhcCCcccHHHHHHHHhCCcHHHHH
Confidence 999999999999886432 11 1 13457999999999999999999774 489999999999
Q ss_pred hcccccC----------CCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 139 VFWMIKP----------TGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 139 LF~~~~~----------~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
||..... .....+...++++++|+.+| ++||++|++|+|||| ||||||+.+.
T Consensus 523 lf~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~qL--~~L~~~L~~t~~hfI---RCIKPN~~k~ 584 (679)
T cd00124 523 LFESELSKTGNSSTGSTSSKGKKKKGQTVGSQFRTSL--DALMATLNSTEPHFI---RCIKPNEEKK 584 (679)
T ss_pred HhccccccccccccccccccccccCCCcHHHHHHHHH--HHHHHHHhcCCCeEE---EEECCCcccC
Confidence 9975321 11222345678999999999 999999999999999 9999999874
No 14
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=1.5e-51 Score=384.51 Aligned_cols=175 Identities=30% Similarity=0.450 Sum_probs=155.8
Q ss_pred CccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeecc
Q psy13375 1 MDAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 1 ~sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lL 78 (204)
.+||||||||||+|+ |||||||||||||||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++|
T Consensus 373 ~~IgiLDI~GFE~f~~NsfEQLcINyaNEkLQ~~f~~~vf~~Eq~eY~~EgI~~~~i~~~dN~~~ldli~~kp~Gil~lL 452 (653)
T cd01379 373 LNVGILDIFGFENFKKNSFEQLCINIANEQIQYYFNQHIFAWEQQEYLNEGVDARLVEYEDNRPLLDMFLQKPLGLLALL 452 (653)
T ss_pred ceEEEEeccccccCCCCCHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcHHHHHhHccCCCcHHHHH
Confidence 369999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeee--------eecCCC----CCccccCCCeeecCCCcceeehhHHHhhcCChHHHhhcccccCC
Q psy13375 79 DDQANWSRGNPMVSCVFW--------MIKPTG----RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPT 146 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~--------~~k~~~----~~~~hyag~V~Y~~~~~l~~n~~~ll~~S~n~~v~~LF~~~~~~ 146 (204)
||||++|+++|++|++++ +.+|+. +.+.||||+|+|+..||++||++.+ ..-+..|+...
T Consensus 453 dee~~~~~~td~~~~~kl~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l-----~~~~~~ll~~S--- 524 (653)
T cd01379 453 DEESRFPQATDQTLVEKFEDNLKSKFFWRPKRVELSFGIHHYAGKVLYNASGFLEKNRDFL-----PADIVLLLRSS--- 524 (653)
T ss_pred HHHhcCCCCCHHHHHHHHHHhcCCCCccCCCCCCCceEEEEeceeEeecCCCHHHhccccc-----cHHHHHHHHhC---
Confidence 999999999999987643 334432 4579999999999999999999976 22333344221
Q ss_pred CccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 147 GRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 147 ~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
.|++++|+.+| .+||++|.+|+|||| ||||||+.+.+
T Consensus 525 --------~tv~~~fr~~l--~~L~~~l~~t~~hfI---RCIKPN~~k~~ 561 (653)
T cd01379 525 --------QTVASYFRYSL--MDLLSKMVVGQPHFV---RCIKPNEDRQA 561 (653)
T ss_pred --------cHHHHHHHHHH--HHHHHHHhccCCceE---EeeCCCcccCc
Confidence 68999999999 999999999999999 99999999854
No 15
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=3.2e-50 Score=380.43 Aligned_cols=189 Identities=18% Similarity=0.108 Sum_probs=158.0
Q ss_pred ccceeecCCCCCcc--------hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCc-
Q psy13375 2 DAPRSDLCGIVDRG--------SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKP- 71 (204)
Q Consensus 2 sIgilDi~GFe~~~--------~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p- 71 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|+.+.+ .||.+|++||+++|
T Consensus 374 ~IgiLDIfGFE~f~~n~~~~~NsfEQLcINyaNEkLQq~f~~~vF~~Eq~eY~~EGI~~~~~~~~~dn~~~i~lid~~p~ 453 (767)
T cd01386 374 SIMLVDTPGFQNPASQGKDRAATFEELCHNYLQERLQLLFHHRTFVQPLERYAEEGVEVEFDLAEPSPGTTVALVDQAPQ 453 (767)
T ss_pred EEEEEecccccccccccccCCCCHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCchhhHHHhhcccc
Confidence 69999999999983 899999999999999999999999999999999999986544 79999999999865
Q ss_pred -------------CceeecccccccccCCCCCceeeee---------eec----------CCCCCccccCC--CeeecCC
Q psy13375 72 -------------NGLLCVLDDQANWSRGNPMVSCVFW---------MIK----------PTGRGETQWSP--LVEGKPN 117 (204)
Q Consensus 72 -------------~Gll~lLDee~~~p~~~d~~f~~~~---------~~k----------~~~~~~~hyag--~V~Y~~~ 117 (204)
.|||++|||||++|+++|++|++++ +.+ +..+.+.|||| +|+|++.
T Consensus 454 ~~~~~~~~~~~~~~GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~~~V~Y~~~ 533 (767)
T cd01386 454 QVVVPAGLRAEDARGLLWLLDEEALVPGSSDDTFLERLFAAYGDRETRETGLSRLRTCEGPLQFVLFHLLGTNPVLYDVT 533 (767)
T ss_pred cccccchhhccCCCchhhhhhHhhcCCCCcHHHHHHHHHHHhccCCCcccCccccccCCCCCcEEEEEcCCCCceEecCC
Confidence 5999999999999999999988643 111 11235699999 5999999
Q ss_pred CcceeehhH--------HHhhcCChHHHhhcccccC----------------------CCccccc--------cCCcccc
Q psy13375 118 GLLCVLDDQ--------ANWSRGNPMVSCVFWMIKP----------------------TGRGETQ--------WSPLVEG 159 (204)
Q Consensus 118 ~~l~~n~~~--------ll~~S~n~~v~~LF~~~~~----------------------~~~~~~~--------~~~~~~s 159 (204)
||+++|++. +|+.|++++|+.||..... .+..+++ ..+++++
T Consensus 534 gfleKNkD~~~~~~~~~ll~~S~~~~i~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~tv~~ 613 (767)
T cd01386 534 GWLRRAKPNPAALNAPQLLQDSKREEINSLFQGRAGLAPVCLGAGAGLEGTSQQALRRSSSIRRTFTSSTAAVKRKSPCV 613 (767)
T ss_pred CHHHhcCCCCChHHHHHHHHhCCcHHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccHHH
Confidence 999998763 4889999999999953210 0000111 1246788
Q ss_pred ccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 160 KPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 160 ~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
+|+.+| ++||++|++|+|||| ||||||+.+.
T Consensus 614 qFk~qL--~~Lm~~L~~t~phfI---RCIKPN~~k~ 644 (767)
T cd01386 614 QVKLQV--DALIDTLRRSGLHFV---HCYLPQHNGG 644 (767)
T ss_pred HHHHHH--HHHHHHHhccCCeeE---EEeCcccccc
Confidence 999999 999999999999999 9999999974
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=2.7e-50 Score=380.17 Aligned_cols=190 Identities=34% Similarity=0.491 Sum_probs=157.3
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||||||++. +||||||||||||||++|++++|..|+++|.+|||.|+.++| .||.+|+|||+++|.|||++|
T Consensus 365 ~IgILDi~GFE~~~~N~fEQLciNyanErLq~~f~~~~f~~e~~~y~~EgI~~~~i~~~~dn~~~ldLi~~~~~Gil~lL 444 (689)
T PF00063_consen 365 SIGILDIFGFENFSVNSFEQLCINYANERLQQFFNQHIFKSEQEEYKEEGIDWPFIDFNPDNQPCLDLIEKKPKGILSLL 444 (689)
T ss_dssp EEEEEEEE-B---SSB-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCS-GCGHHHHHHHHHHSSTTSHHHHH
T ss_pred cCcccCccccccccccccccceeeeccccccceeeeecccccccccccccccccccccccCchhhhhhhccccCCHHHHh
Confidence 69999999999999 999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred cccccccCCCCCceeeee----------eecCC--------CCCccccCCCeeecCCCcceeehhH-------HHhhcCC
Q psy13375 79 DDQANWSRGNPMVSCVFW----------MIKPT--------GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGN 133 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~----------~~k~~--------~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n 133 (204)
||||+.|+++|++|+.++ +.+|+ .+.+.||+|+|+|++.||+++|++. +|+.|+|
T Consensus 445 dee~~~~~~sd~~fl~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~n 524 (689)
T PF00063_consen 445 DEECLLPRGSDESFLEKLLKRHSGKHPSFVKPRFSRSTSKSSFTIKHYAGDVTYDVEGFLEKNRDPLSQDFVSLLRSSTN 524 (689)
T ss_dssp HHHCTSTTS-HHHHHHHHHHHHTTTSTTEECTSSSTSSTTSCEEEEETTEEEEEE-TTHHHHHHE-S-HHHHHHHHTSSS
T ss_pred hhhhhcccchhhHHHHHHHhhcccCCCcccccccccccCCCceEeecccCcceeccccccccccchHHHHHHHHHHhCcC
Confidence 999999999999987532 44442 2346999999999999999998764 4999999
Q ss_pred hHHHhhcccccC--------------------CCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCC
Q psy13375 134 PMVSCVFWMIKP--------------------TGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGR 193 (204)
Q Consensus 134 ~~v~~LF~~~~~--------------------~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~ 193 (204)
++|+.||..... .....+...++++++|+.+| ++||++|++|++||| ||||||+.
T Consensus 525 ~~v~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~qf~~sL--~~L~~~L~~t~~hfI---rCIkPN~~ 599 (689)
T PF00063_consen 525 SFVSSLFSSEATATSSSSSSLSRRSSSSSTQSRSSGSKKKKSTVSSQFRSSL--DELMDTLRSTQPHFI---RCIKPNDQ 599 (689)
T ss_dssp HHHHHHTHSHHH---S-S-S-BTTTTCCCTTSSCCCGGTCSSBHHHHHHHHH--HHHHHHHCTSEEEEE---EEE-SSSS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccH--HHHHhhhhhcccceE---EEeccccc
Confidence 999999984421 11223445588999999999 999999999999999 99999998
Q ss_pred CCC
Q psy13375 194 GET 196 (204)
Q Consensus 194 ~~~ 196 (204)
+.+
T Consensus 600 ~~~ 602 (689)
T PF00063_consen 600 KKP 602 (689)
T ss_dssp --T
T ss_pred ccc
Confidence 643
No 17
>KOG0164|consensus
Probab=100.00 E-value=9.8e-49 Score=355.53 Aligned_cols=190 Identities=27% Similarity=0.342 Sum_probs=169.4
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
.||+|||||||+|+ |||||||||+||+||++|++.+++.||+||.+|||+|..++|++|..++||++.+..||++|||
T Consensus 376 Vigvldiygfeif~~NSFEQfcINYCNEKLQQlFIel~LKqEQEEY~rEgI~W~~i~YFnN~iIcdLvE~~~~GIlailD 455 (1001)
T KOG0164|consen 376 VIGVLDIYGFEIFQDNSFEQFCINYCNEKLQQLFIELVLKQEQEEYEREGIEWTHIDYFNNKIICDLVEQPHKGILAILD 455 (1001)
T ss_pred EEEEEEeeeEEeecCCcHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCCceehhhcCCceeeehhccCccchhhhhh
Confidence 48999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccC-CCCCceeeee---------ee----cCCC-------CCccccCCCeeecCCCcceeehhHH-------Hhhc
Q psy13375 80 DQANWSR-GNPMVSCVFW---------MI----KPTG-------RGETQWSPLVEGKPNGLLCVLDDQA-------NWSR 131 (204)
Q Consensus 80 ee~~~p~-~~d~~f~~~~---------~~----k~~~-------~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S 131 (204)
|||+.|+ .||++|++++ |. ++.+ +-+.||||.|+|.+.||+++|.|.+ |+.|
T Consensus 456 e~Cl~~G~vtD~tfL~~l~~~~~~H~Hy~sr~~~~~dksl~~~~Fri~HYAG~V~YsV~gFidKN~D~Lf~dlk~~m~~s 535 (1001)
T KOG0164|consen 456 EACLRPGTVTDETFLEKLNQKLKKHPHYTSRKLKQTDKSLGFSDFRITHYAGDVTYSVEGFIDKNNDLLFQDLKRLMYNS 535 (1001)
T ss_pred HHhcCCCccchHHHHHHHHHHhhhCCcchhhhccccccccCccceeEEEeccceEEEEEeeeccCccHHHHHHHHHHHhc
Confidence 9999996 6788888632 11 2221 2359999999999999998887754 8999
Q ss_pred CChHHHhhcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 132 GNPMVSCVFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 132 ~n~~v~~LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+|+++++||....+.-.......+|++++|+.|+ ..|+..|.+.+|+|| ||||||+.+.+
T Consensus 536 ~~~~l~~~fpeG~~~~~~~tkRP~Tagt~Fk~Sm--~~Lv~nL~sKeP~Yv---RcikPNe~k~~ 595 (1001)
T KOG0164|consen 536 KNPLLKSLFPEGNPDIAEVTKRPPTAGTLFKNSM--AALVKNLASKEPNYV---RCIKPNEHKQP 595 (1001)
T ss_pred CCchHHHhCCCCChhHHhhhcCCCcHHHHHHHHH--HHHHHHHhhcCCCeE---EeeccccccCc
Confidence 9999999998777665555567789999999999 999999999999999 99999998753
No 18
>KOG0162|consensus
Probab=100.00 E-value=2.9e-47 Score=346.44 Aligned_cols=191 Identities=25% Similarity=0.351 Sum_probs=166.5
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhc-CcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEG-KPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~-~p~Gll~lL 78 (204)
|||||||||||+|+ |||||||||.||+||+.|++.+++.|||+|.+|||.|.++.|+||+-++|||+. .|.||+++|
T Consensus 384 sIGiLDIYGFEIFe~N~FEQ~CINfVNEKLQQIFIeLTLKaEQEeYvrE~I~WTpIkYFnNKvVCDLIE~K~PPGims~l 463 (1106)
T KOG0162|consen 384 SIGILDIYGFEIFENNGFEQFCINFVNEKLQQIFIELTLKAEQEEYVREGIKWTPIKYFNNKVVCDLIENKRPPGIMSAL 463 (1106)
T ss_pred ceeeEEeeeeeecccCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcccccchhhcCCeeeeehhhccCCchHHHHH
Confidence 79999999999999 999999999999999999999999999999999999999999999999999987 588999999
Q ss_pred cccccccC----CCCCceeeeee----ecC------CCCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHH
Q psy13375 79 DDQANWSR----GNPMVSCVFWM----IKP------TGRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVS 137 (204)
Q Consensus 79 Dee~~~p~----~~d~~f~~~~~----~k~------~~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~ 137 (204)
||.|.... +.|.+|++++- ..| .++.+.||||.|+|+..||-++|+|.+ ++.|.|+|++
T Consensus 464 dD~~At~Ha~~~~aDqa~~qrLn~~~~s~phF~~~s~~FvIkHYAGdVtYdi~G~~drNrD~L~~DlieLm~ts~~~Fl~ 543 (1106)
T KOG0162|consen 464 DDVCATAHADSEGADQALLQRLNKLFGSHPHFESRSNGFVIKHYAGDVTYDIDGFCDRNRDVLFKDLIELMQTSENPFLK 543 (1106)
T ss_pred HHHHHHhccccchhHHHHHHHHHHHhcCCCccccccCceEEEEeccceeeecccccccchhHHHHHHHHHHhccchHHHH
Confidence 99998754 34556665331 122 244579999999999999999998754 8999999999
Q ss_pred hhcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCC-CCCCC
Q psy13375 138 CVFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRG-ETQWS 199 (204)
Q Consensus 138 ~LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~-~~~~~ 199 (204)
.||...-.+.+. ...+|.+.+.+++. .+|+++|++|.|||| ||||||+.+ ..+|+
T Consensus 544 slFPe~v~~dsk--rRP~Tag~kIkkqA--NdLVeTLmKc~P~YI---R~IKPNeTK~pnD~e 599 (1106)
T KOG0162|consen 544 SLFPENVDADSK--RRPPTAGDKIKKQA--NDLVETLMKCQPHYI---RCIKPNETKSPNDWE 599 (1106)
T ss_pred HhCchhhccccc--CCCCCchhhHHhhH--HHHHHHHHhcCccee---EeeCCCCCCCCccHH
Confidence 999876554443 34578899999999 999999999999999 999999997 45664
No 19
>KOG0161|consensus
Probab=100.00 E-value=2.5e-46 Score=372.61 Aligned_cols=189 Identities=29% Similarity=0.366 Sum_probs=165.7
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||+|||+|. |||||||||+||+||++|++++|..++++|.+|||.|.+++| .|-+||++||+ +|.||+|+|
T Consensus 449 fIgvLDiaGFEIfe~nSFEQLciNytnEkLQqfFnh~mFvlEqeeY~~EgIew~fidfG~Dlq~~idLIE-kp~Gi~slL 527 (1930)
T KOG0161|consen 449 FIGVLDIAGFEIFEFNSFEQLCINYTNEKLQQFFNHHMFVLEQEEYQREGIEWDFIDFGLDLQPTIDLIE-KPMGILSLL 527 (1930)
T ss_pred cceeeeeccccccCcCCHHHHHHHHHHHHHHhhhcchhhhhhHHHHHHhCCceeeeccccchhhhHHHHh-chhhHHHHH
Confidence 69999999999999 999999999999999999999999999999999999999999 89999999999 567999999
Q ss_pred cccccccCCCCCceeeee----------eecCC------CCCccccCCCeeecCCCcceeehhH-------HHhhcCChH
Q psy13375 79 DDQANWSRGNPMVSCVFW----------MIKPT------GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPM 135 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~----------~~k~~------~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~ 135 (204)
||||.+|+++|.+|+.++ |.+|+ ++...||||+|.|++.||+.+|.+. +|+.|++++
T Consensus 528 dEEc~~PkAtd~tf~~kL~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~V~Y~~~~WL~Knkdpln~~v~~ll~~s~~~~ 607 (1930)
T KOG0161|consen 528 DEECVVPKATDKTFLEKLCDQHLGKHPKFQKPKGKKAEAHFALVHYAGTVDYNVDGWLEKNKDPLNDNVVSLLKQSTNKL 607 (1930)
T ss_pred HHHHhcCCCccchHHHHHHHHhhccCccccCcccccchhhhheeeecceeccCccchhhcCCCCchHHHHHHHHhcccHH
Confidence 999999999999987633 55663 2235999999999999999998764 488889999
Q ss_pred HHhhcccccC-C---------CccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 136 VSCVFWMIKP-T---------GRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 136 v~~LF~~~~~-~---------~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
|..||+.... . .++++++..|+...++.+| +.||++|++|+|||| |||.||+.+.+
T Consensus 608 v~~l~~~~~~~~~~~~~~~~~~~~K~g~F~Tvs~~~keql--~~Lm~~l~~T~phFv---RCiIPn~~K~~ 673 (1930)
T KOG0161|consen 608 VSSLFQDYAGAAAAAKGGEALKKTKKGSFRTVSQLYKEQL--NKLMTTLRSTHPHFV---RCIIPNEEKKP 673 (1930)
T ss_pred HHHHhhhhhccchhhhhhhhhcccCCcchhhHHHHHHHHH--HHHHHHhccCCCcee---EEeccCccccc
Confidence 9999985111 0 2344455567888899999 999999999999999 99999998753
No 20
>KOG0163|consensus
Probab=100.00 E-value=2.6e-42 Score=314.97 Aligned_cols=189 Identities=27% Similarity=0.317 Sum_probs=164.2
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
-||||||.|||.|. |||||||||+||+||++|+++++..||+.|..||+.++.+.|.||++|++||+.+..|||.|||
T Consensus 452 fiGVLDiAGFEyf~~NSFEQFCINyCNEKLQ~FFNerILkeEQElYekEGLnv~ei~f~DNqDcIeL~E~K~~GifdlLD 531 (1259)
T KOG0163|consen 452 FIGVLDIAGFEYFAVNSFEQFCINYCNEKLQKFFNERILKEEQELYEKEGLNVPEIEFTDNQDCIELIEAKSNGIFDLLD 531 (1259)
T ss_pred eeEEEeeccceeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEeccchhHHHHHHHhccchhhhhh
Confidence 39999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeee-------e--eecCC--------------CCCccccCCCeeecCCCcceeehhHH-------Hh
Q psy13375 80 DQANWSRGNPMVSCVF-------W--MIKPT--------------GRGETQWSPLVEGKPNGLLCVLDDQA-------NW 129 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~-------~--~~k~~--------------~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~ 129 (204)
||.++|+.++..|... + +.-|. |.-++||||.|-|.+.-|+++|.+.+ ++
T Consensus 532 EEaklP~~s~qhFT~~vHe~~k~HfRL~~PRkSklksHR~lRDdEG~liRHfAGaVCYeT~~FvEKNnD~LH~SLe~Li~ 611 (1259)
T KOG0163|consen 532 EEAKLPKPSYQHFTARVHESNKNHFRLDLPRKSKLKSHRELRDDEGFLIRHFAGAVCYETEQFVEKNNDALHNSLEGLIE 611 (1259)
T ss_pred hhccCCCcchHHHHHHHHHhhhcceeecCCchhhhhhhhhhccccceeeeecccceeechHHHHHhccHHHHHHHHHHHH
Confidence 9999999999877531 1 11221 23369999999999999999987754 88
Q ss_pred hcCChHHHhhcccccCCCcc---ccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 130 SRGNPMVSCVFWMIKPTGRG---ETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 130 ~S~n~~v~~LF~~~~~~~~~---~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
+|.++++.+||.+....+.. .+-..-.|+++|+.+| ..|++.|+.+..||| ||||||..+.
T Consensus 612 es~~~ll~sLF~S~s~t~a~~~~gkL~~iSVGaKFKtQL--~~LldKL~stGt~Fi---RCiKPN~kM~ 675 (1259)
T KOG0163|consen 612 ESDNPLLVSLFPSGSSTSAKQTRGKLKFISVGAKFKTQL--SELLDKLESTGTHFI---RCIKPNSKMI 675 (1259)
T ss_pred hccchHHHHHccCCCCCccccccceeeEEehhHHHHHHH--HHHHHHHHhcCCeeE---EeecCccccc
Confidence 99999999999876555421 1223346789999999 999999999999999 9999998763
No 21
>KOG0160|consensus
Probab=100.00 E-value=5.3e-41 Score=315.61 Aligned_cols=187 Identities=31% Similarity=0.405 Sum_probs=167.4
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||.|+ +||||||||+||+||+.|++|+|+.|+++|..|+|+|..++|.||++|+++|+. |.|++++||
T Consensus 369 ~igVLDiYgFEsF~~nsfeQfcINyanEkLqq~fnqHvfk~Eqeey~~e~i~Ws~ief~dNq~~~~lie~-~~Gi~~Lld 447 (862)
T KOG0160|consen 369 FIGVLDIYGFESFEVNSFEQFCINYANEKLQQQFNQHVFKLEQEEYTKEEIDWSGIEFRDNQECLDLIEK-PLGILALLD 447 (862)
T ss_pred eeeeehcccccccccCcHHHhhhhhHHHHhhHHHHHHHHHHHHHHHHhhccccccccCcCccchhhhhcc-ccchhhccc
Confidence 69999999999999 999999999999999999999999999999999999999999999999999997 899999999
Q ss_pred ccccccCCCCCceeeee---------eecCCC----CCccccCCCeeecCCCcceeehhHH-------HhhcCChHHHhh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPTG----RGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVSCV 139 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~~----~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~~L 139 (204)
|+|.+|.++|+++..++ +.||+. .-+.||||.|+|+..+|+++|.+.+ ++.|+++++..+
T Consensus 448 e~c~lp~~t~~~~a~KL~~~~~~~~~f~kpr~~~~~f~v~hyAg~v~y~~~~fL~knrd~v~~el~~ll~~s~~~~~~~~ 527 (862)
T KOG0160|consen 448 EECMLPKGTDETLAQKLYQTLKRNKRFTKPRLSRTDFRVAHYAGDVTYDTEGFLEKNRDYVSDELIDLLLASDCHFVAGL 527 (862)
T ss_pred hhccCCCCCcchHHHHHHHHhccCCccCCCCCCcCCcccccccCccccchhhhccCCccccCHHHHhhhhhcccchHHHh
Confidence 99999999999876533 445542 3469999999999999999998754 888999999999
Q ss_pred cccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCC
Q psy13375 140 FWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGE 195 (204)
Q Consensus 140 F~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~ 195 (204)
|......++ .+...++++++|+.++ ..||++|..+.|||| ||||||+.+.
T Consensus 528 ~~~~~~~~~-~~~~~~tv~s~fk~~l--~~Lm~~l~~t~phyi---rcikPn~~~~ 577 (862)
T KOG0160|consen 528 APPLRADSS-AKSKRSTVGSQFKLQL--ISLMETLNSTPPHYI---RCIKPNAEKK 577 (862)
T ss_pred ccchhcchh-hhhhcccHHHHHHHHH--HHHHHHhcCCCCCCc---eeeCcchhcc
Confidence 984443332 3456789999999999 999999999999999 9999999863
No 22
>KOG4229|consensus
Probab=99.96 E-value=2.3e-31 Score=255.79 Aligned_cols=194 Identities=30% Similarity=0.421 Sum_probs=157.3
Q ss_pred CccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeecc
Q psy13375 1 MDAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 1 ~sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lL 78 (204)
++||||||||||+|. +|||+|||||||+||.+|++++|..|++||..|+|+|..+.|.||..++++|..+|.||+.+|
T Consensus 427 ~~IgiLdiFgfE~f~~nsfEq~~in~Ane~lQ~~fnqhIf~~Eq~ey~~e~I~w~~i~~~dN~~~ldli~~kp~gil~li 506 (1062)
T KOG4229|consen 427 LSIGILDIFGFENFERNSFEQLCINLANEQLQYYFNQHIFALEQEEYDNESIDWRNIEFADNRRRLDLISPKPMGILSLI 506 (1062)
T ss_pred ceeehhhhhcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhcCCCeeeeeeeeccchhhhhccCccchhhee
Confidence 479999999999997 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeee---------eeecCC-----CCCccccCCCeeecCCCcceeehhHH-------HhhcCChHHH
Q psy13375 79 DDQANWSRGNPMVSCVF---------WMIKPT-----GRGETQWSPLVEGKPNGLLCVLDDQA-------NWSRGNPMVS 137 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~---------~~~k~~-----~~~~~hyag~V~Y~~~~~l~~n~~~l-------l~~S~n~~v~ 137 (204)
|||+.+|+++|.+++.+ ++..|+ ..++.||+|.|.|+..||+++|.+.+ ++.|.+.++.
T Consensus 507 Dees~fP~~td~tl~~k~~~q~~~~~~y~~~k~~~e~~f~I~Hyagkv~y~~~~flekNrD~~~~d~~~~~~s~~~~~~~ 586 (1062)
T KOG4229|consen 507 DEESRFPKATDQTLLLKLNMQHGSNNLYVFPKSRVETVFGITHYAGKVQYNIRGFLEKNRDTVRNDLVNLLRSSDESLLR 586 (1062)
T ss_pred cccCcCCchHHHHHHHHhhhhhhcccccccccccccceeeeeeecceehhhhhhHHHhhhhhhhhhHHhhcccccchhhc
Confidence 99999999999987642 344443 24579999999999999999998866 6667788888
Q ss_pred hhcccccCCCc-----------------------cccc---------------cCCccccccccccchhHHHHHhccCCC
Q psy13375 138 CVFWMIKPTGR-----------------------GETQ---------------WSPLVEGKPNGLLCVLDDQANWSRGNP 179 (204)
Q Consensus 138 ~LF~~~~~~~~-----------------------~~~~---------------~~~~~~s~~~~~l~~~~L~~~l~~~~~ 179 (204)
++......+.. ..++ ....++...+-++ .+....|.+++.
T Consensus 587 ~~~~~~~~~~~~~~~~ra~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~--~~~~s~l~rg~~ 664 (1062)
T KOG4229|consen 587 QLVNGDPTAVSRWFELRALKVAMPVPLEVTLRRPVRKTLTADSSRSAPETTNCLPDKVLPEDRPSL--FEELSALARGQD 664 (1062)
T ss_pred ccCCCCCccCCcchhhhhhcccccccchhhhccccccccccccccchHHHHHhhhccccccCChhh--hcchhhcCCCcc
Confidence 88762110000 0000 1122344455566 788888999999
Q ss_pred eEEeecccccCCCCC-CCCCC
Q psy13375 180 MVSCVFWMIKPTGRG-ETQWS 199 (204)
Q Consensus 180 ~FV~~~rCikPN~~~-~~~~~ 199 (204)
||+ |||++|++- ..+|+
T Consensus 665 ~~~---~~i~~~~~~~~~q~~ 682 (1062)
T KOG4229|consen 665 HFM---RAISQNPRYALEQGS 682 (1062)
T ss_pred chh---hhhhcCchhhhhhcC
Confidence 999 999999884 33443
No 23
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=40.03 E-value=33 Score=29.15 Aligned_cols=31 Identities=16% Similarity=0.344 Sum_probs=22.6
Q ss_pred ccceeecCCCCCcc----hhhHHHHHhhhHHHHHHH
Q psy13375 2 DAPRSDLCGIVDRG----SFEQLCINYANEHLQYYF 33 (204)
Q Consensus 2 sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~ 33 (204)
.+.|+|+|||..+. .+ +-.++|.++++..+.
T Consensus 64 ~l~iiDTpGfgd~~~~~~~~-~~i~~yi~~q~~~~l 98 (276)
T cd01850 64 KLTVIDTPGFGDNINNSDCW-KPIVDYIDDQFDQYL 98 (276)
T ss_pred EEEEEecCCccccccchhhH-HHHHHHHHHHHHHHH
Confidence 46799999998654 33 556788888876655
No 24
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=34.95 E-value=18 Score=28.27 Aligned_cols=28 Identities=36% Similarity=0.502 Sum_probs=26.1
Q ss_pred hhhHHHHHHHHHHHhhhhHhHhhhcCCc
Q psy13375 24 YANEHLQYYFNQHVFQYEQEEYNKEGIR 51 (204)
Q Consensus 24 ~~nE~lq~~~~~~~f~~~~~~y~~Egi~ 51 (204)
-|++.||.+|-++-|..-.++|.++||+
T Consensus 117 ~AQahLq~fYa~~GFv~~~e~yledGIp 144 (155)
T COG2153 117 GAQAHLQDFYASFGFVRVGEEYLEDGIP 144 (155)
T ss_pred ehHHHHHHHHHHhCcEEcCchhhcCCCC
Confidence 4789999999999999999999999995
No 25
>PF00735 Septin: Septin; InterPro: IPR000038 Septins constitute a eukaryotic family of guanine nucleotide-binding proteins, most of which polymerise to form filaments []. Members of the family were first identified by genetic screening for Saccharomyces cerevisiae (Baker's yeast) mutants defective in cytokinesis []. Temperature-sensitive mutations in four genes, CDC3, CDC10, CDC11 and CDC12, were found to cause cell-cycle arrest and defects in bud growth and cytokinesis. The protein products of these genes localise at the division plane between mother and daughter cells, indicating a role in mother-daughter separation during cytokinesis []. Members of the family were therefore termed septins to reflect their role in septation and cell division. The identification of septin homologues in higher eukaryotes, which localise to the cleavage furrow in dividing cells, supports an orthologous function in cytokinesis. Septins have since been identified in most eukaryotes, except plants []. Septins are approximately 40-50 kDa in molecular mass, and typically comprise a conserved central core domain (more than 35% sequence identity between mammalian and yeast homologues) flanked by more divergent N- and C-termini. Most septins possess a P-loop motif in their N-terminal domain (which is characteristic of GTP-binding proteins), and a predicted C-terminal coiled-coil domain []. A number of septin interaction partners have been identified in yeast, many of which are components of the budding site selection machinery, kinase cascades or of the ubiquitination pathway. It has been proposed that septins may act as a scaffold that provides an interaction matrix for other proteins [, ]. In mammals, septins have been shown to regulate vesicle dynamics []. Mammalian septins have also been implicated in a variety of other cellular processes, including apoptosis, carcinogenesis and neurodegeneration []. This entry represents a variety of septins and homologous sequences involved in the cell division process.; GO: 0005525 GTP binding, 0007049 cell cycle; PDB: 2QAG_B 3FTQ_D 2QA5_A 2QNR_B 3TW4_A 3T5D_C.
Probab=29.11 E-value=68 Score=27.41 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=20.8
Q ss_pred ccceeecCCCCCcc----hhhHHHHHhhhHHHHHHH
Q psy13375 2 DAPRSDLCGIVDRG----SFEQLCINYANEHLQYYF 33 (204)
Q Consensus 2 sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~ 33 (204)
.+.|+|+|||...- .+ +..++|..++...+.
T Consensus 64 ~LtiiDTpGfGd~i~n~~~~-~~I~~yI~~qf~~~l 98 (281)
T PF00735_consen 64 NLTIIDTPGFGDNIDNSDCW-EPIVDYIESQFDSYL 98 (281)
T ss_dssp EEEEEEEC-CSSSSTHCHHH-HHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCccccccchhhh-HHHHHHHHHHHHHHH
Confidence 46799999998643 33 456788887776653
No 26
>KOG2655|consensus
Probab=24.75 E-value=67 Score=28.81 Aligned_cols=32 Identities=19% Similarity=0.368 Sum_probs=23.7
Q ss_pred ccceeecCCCCCcc----hhhHHHHHhhhHHHHHHHH
Q psy13375 2 DAPRSDLCGIVDRG----SFEQLCINYANEHLQYYFN 34 (204)
Q Consensus 2 sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~~ 34 (204)
.+.|+|+|||=.+- .| +-.++|..++.++|+.
T Consensus 80 ~LtvidtPGfGD~vdns~~w-~pi~~yi~~q~~~yl~ 115 (366)
T KOG2655|consen 80 NLTVIDTPGFGDAVDNSNCW-RPIVNYIDSQFDQYLD 115 (366)
T ss_pred eeEEeccCCCcccccccccc-hhhhHHHHHHHHHHHh
Confidence 35789999997643 45 4567888888888764
No 27
>KOG1547|consensus
Probab=22.30 E-value=1.1e+02 Score=26.26 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=22.8
Q ss_pred CccceeecCCCCCcc----hhhHHHHHhhhHHHHHHHH
Q psy13375 1 MDAPRSDLCGIVDRG----SFEQLCINYANEHLQYYFN 34 (204)
Q Consensus 1 ~sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~~ 34 (204)
|-+.++|+|||-.+- -+|. .+-|.||+-.+|..
T Consensus 104 lkltviDTPGfGDqInN~ncWeP-I~kyIneQye~yL~ 140 (336)
T KOG1547|consen 104 LKLTVIDTPGFGDQINNDNCWEP-IEKYINEQYEQYLR 140 (336)
T ss_pred EEEEEecCCCcccccCccchhHH-HHHHHHHHHHHHHH
Confidence 347899999998654 4543 46788887666553
No 28
>COG5019 CDC3 Septin family protein [Cell division and chromosome partitioning / Cytoskeleton]
Probab=22.18 E-value=1.1e+02 Score=27.51 Aligned_cols=31 Identities=19% Similarity=0.348 Sum_probs=21.4
Q ss_pred ccceeecCCCCCcc----hhhHHHHHhhhHHHHHHH
Q psy13375 2 DAPRSDLCGIVDRG----SFEQLCINYANEHLQYYF 33 (204)
Q Consensus 2 sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~ 33 (204)
.+.|+|+|||-.+- .++ -.++|..++..+|+
T Consensus 83 ~l~vIDtpGfGD~idNs~~we-~I~~yI~~q~d~yl 117 (373)
T COG5019 83 NLTVIDTPGFGDFIDNSKCWE-PIVDYIDDQFDQYL 117 (373)
T ss_pred EEEEeccCCccccccccccHH-HHHHHHHHHHHHHH
Confidence 36799999998654 553 44577777666654
No 29
>PF13983 YsaB: YsaB-like lipoprotein
Probab=22.12 E-value=26 Score=23.68 Aligned_cols=14 Identities=29% Similarity=0.482 Sum_probs=9.8
Q ss_pred eeecCCCCCcc-hhh
Q psy13375 5 RSDLCGIVDRG-SFE 18 (204)
Q Consensus 5 ilDi~GFe~~~-~fe 18 (204)
-+|+-|||.|. |+|
T Consensus 36 ~idv~~FeqfQgSYE 50 (77)
T PF13983_consen 36 KIDVTGFEQFQGSYE 50 (77)
T ss_pred eEeecchhhhccceE
Confidence 36788888777 554
Done!