Query psy13375
Match_columns 204
No_of_seqs 162 out of 1017
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 17:52:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13375.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13375hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lkx_A Myosin IE heavy chain; 100.0 3.9E-56 1.3E-60 416.7 4.5 189 1-196 380-596 (697)
2 2v26_A Myosin VI; calmodulin-b 100.0 1.5E-55 5.1E-60 417.3 3.9 190 2-196 447-673 (784)
3 4db1_A Myosin-7; S1DC, cardiac 100.0 3.6E-55 1.2E-59 413.8 5.8 189 2-196 456-681 (783)
4 1w9i_A Myosin II heavy chain; 100.0 3.3E-55 1.1E-59 413.1 3.1 190 2-196 449-664 (770)
5 4anj_A Unconventional myosin-V 100.0 5.9E-55 2E-59 422.3 3.8 190 2-196 451-677 (1052)
6 1w7j_A Myosin VA; motor protei 100.0 1.8E-54 6.3E-59 410.1 6.5 189 2-196 432-670 (795)
7 1kk8_A Myosin heavy chain, str 100.0 2.4E-54 8.2E-59 411.1 4.1 189 2-196 455-679 (837)
8 2ycu_A Non muscle myosin 2C, a 100.0 1.9E-53 6.5E-58 412.0 6.5 194 2-200 428-664 (995)
9 2dfs_A Myosin-5A; myosin-V, in 100.0 2.3E-53 8E-58 414.1 6.0 189 2-196 432-670 (1080)
10 1g8x_A Myosin II heavy chain f 100.0 4.5E-53 1.5E-57 409.4 4.7 190 2-196 449-664 (1010)
11 1i84_S Smooth muscle myosin he 100.0 2.2E-52 7.6E-57 411.8 6.2 190 2-196 459-692 (1184)
12 4e2i_2 DNA polymerase alpha su 23.5 21 0.00071 23.8 0.4 20 6-25 12-35 (78)
13 3t5d_A Septin-7; GTP-binding p 21.1 77 0.0026 25.0 3.6 31 2-33 66-100 (274)
No 1
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=100.00 E-value=3.9e-56 Score=416.67 Aligned_cols=189 Identities=24% Similarity=0.285 Sum_probs=164.2
Q ss_pred CccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeecc
Q psy13375 1 MDAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 1 ~sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lL 78 (204)
.+||||||||||+|+ +||||||||||||||++|++++|+.||++|.+|||+|..++|.||++|+|||+++|.|||+||
T Consensus 380 ~~IGvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dN~~~idLie~kp~GilslL 459 (697)
T 1lkx_A 380 PVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLL 459 (697)
T ss_dssp CEEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHTTSSSSSHHHHH
T ss_pred eeEEeeccccccccCcCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCHHHHHHHhcccCChhhhh
Confidence 379999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCceeeee---------eecCC----------CCCccccCCCeeecCCCcceeehhH-------HHhhcC
Q psy13375 79 DDQANWSRGNPMVSCVFW---------MIKPT----------GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRG 132 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~---------~~k~~----------~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~ 132 (204)
||||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|+|. +|+.|+
T Consensus 460 DEec~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~ 539 (697)
T 1lkx_A 460 DEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSS 539 (697)
T ss_dssp HHHHHSTTCCHHHHHHHHHHHSSSSTTEECTTTSCCTTSCTTEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCC
T ss_pred HHhhCCCCCChHHHHHHHHHHhcCCCccccCCCCCCCccccCceeeeeeeeEEEEccCChhhhhcccccHHHHHHHhccc
Confidence 999999999999987643 33322 1246999999999999999999875 589999
Q ss_pred ChHHHhhcccccCCCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 133 NPMVSCVFWMIKPTGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 133 n~~v~~LF~~~~~~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
|++|+.||......+ .+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 540 ~~~l~~lf~~~~~~~--~~~r~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 596 (697)
T 1lkx_A 540 DPLVQGLFPPTRPED--SKKRPETAGSQFRNAM--NALITTLLACSPHYV---RCIKSNDNKQA 596 (697)
T ss_dssp SHHHHHHCC-------------CCHHHHHHHHH--HHHHHHHTTSEEEEE---EEECCCTTCCT
T ss_pred hHHHHHhcccccccc--ccCCCCcHHHHHHHHH--HHHHHHHHccCCcce---EeecCCCcCCC
Confidence 999999998644322 2334578999999999 999999999999999 99999998743
No 2
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=100.00 E-value=1.5e-55 Score=417.31 Aligned_cols=190 Identities=23% Similarity=0.254 Sum_probs=164.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +||||||||||||||++|++++|..||++|.+|||+|..++|.||++|+|||+++|.|||+|||
T Consensus 447 ~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~DN~~~idLie~kp~GIlslLD 526 (784)
T 2v26_A 447 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILD 526 (784)
T ss_dssp EEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHH
T ss_pred eeeecccCCcccCCcCCHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCCcccccccChHHHHHHHhhccccHHHHHH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC--------------CCCccccCCCeeecCCCcceeehh-------HHHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT--------------GRGETQWSPLVEGKPNGLLCVLDD-------QANW 129 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~--------------~~~~~hyag~V~Y~~~~~l~~n~~-------~ll~ 129 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||.|+|++.||+++|+| .+|+
T Consensus 527 Ee~~~p~~tD~~f~~kl~~~~~~~~~~~~p~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~ 606 (784)
T 2v26_A 527 EENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLIC 606 (784)
T ss_dssp HHHHSSSCCHHHHHHHHHHHTTTCTTEECGGGCSSGGGTTSCTTSEEEEEETTEEEEEECTTHHHHTBCCCCHHHHHHHH
T ss_pred HHhcCCCCChHHHHHHHHHHhCCCcccccCCCccccccccccCCCceEeeecCccEeeeccCHHHhccchhhHHHHHHHH
Confidence 99999999999987643 22331 234699999999999999999987 4589
Q ss_pred hcCChHHHhhcccccCCC-c----cccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 130 SRGNPMVSCVFWMIKPTG-R----GETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 130 ~S~n~~v~~LF~~~~~~~-~----~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
.|+|++|+.||......+ + ..+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 607 ~S~~~~l~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 673 (784)
T 2v26_A 607 ESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQL--NLLLDKLRSTGASFI---RCIKPNLKMTS 673 (784)
T ss_dssp TCSCHHHHHHC----------------CCCCBHHHHHHHHH--HHHHHHHHTSEEEEE---EEECCCSSCCS
T ss_pred hchhhHHHHHcccccccccCcccCCCCCccccHHHHHHHHH--HHHHHHHHccCCeeE---EEecCCccccc
Confidence 999999999998542111 1 11223478999999999 999999999999999 99999998754
No 3
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=100.00 E-value=3.6e-55 Score=413.81 Aligned_cols=189 Identities=28% Similarity=0.387 Sum_probs=162.6
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||||||+|+ +||||||||||||||++|++++|+.||++|.+|||+|..++| .||++|+|||++ |.|||+||
T Consensus 456 ~IGvLDI~GFE~f~~NsFEQlCINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~~Dn~~~idLiek-p~Gil~lL 534 (783)
T 4db1_A 456 FIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEK-PMGIMSIL 534 (783)
T ss_dssp EEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCGGGGGHHHHHHHHS-TTSHHHHH
T ss_pred eEEEeccccccccccCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCCcccccccCChHHHHHHHhC-CCchHhhh
Confidence 69999999999999 999999999999999999999999999999999999999999 599999999995 89999999
Q ss_pred cccccccCCCCCceeeee----------eecCC--------CCCccccCCCeeecCCCcceeehh-------HHHhhcCC
Q psy13375 79 DDQANWSRGNPMVSCVFW----------MIKPT--------GRGETQWSPLVEGKPNGLLCVLDD-------QANWSRGN 133 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~----------~~k~~--------~~~~~hyag~V~Y~~~~~l~~n~~-------~ll~~S~n 133 (204)
||||++|+++|++|++++ +.+|+ .+.+.||||.|+|++.||+++|+| .+|+.|+|
T Consensus 535 DEec~~p~~tD~tf~~kl~~~~~~~~~~f~~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~ 614 (783)
T 4db1_A 535 EEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSL 614 (783)
T ss_dssp CC-TTCTTCCHHHHHHHHHHHHTTTCTTEECCCC----C-CCEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSS
T ss_pred hHHhcCCCCCHHHHHHHHHHHhcCCCCCccCCCCCCCCCCCCeEEeCcCCceEEeCcChhhhccccccHHHHHHHHHCcc
Confidence 999999999999987643 44443 134699999999999999999877 45999999
Q ss_pred hHHHhhcccccCC-----C----ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 134 PMVSCVFWMIKPT-----G----RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 134 ~~v~~LF~~~~~~-----~----~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
++|+.||...... + +.+....+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 615 ~~v~~lf~~~~~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 681 (783)
T 4db1_A 615 KLLSTLFANYAGADAPIEKGKGKAKKGSSFQTVSALHRENL--NKLMTNLRSTHPHFV---RCIIPNETKSP 681 (783)
T ss_dssp HHHHHHHHSCC------------------CCCHHHHHHHHH--HHHHHHHHTSEEEEE---EEECCCSSCCT
T ss_pred HHHHHHhhccccccccccCccCCCCcCCCCccHHHHHHHHH--HHHHHHHHccCCEEE---EeeCCCcccCC
Confidence 9999999743211 0 111123378999999999 999999999999999 99999998743
No 4
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=100.00 E-value=3.3e-55 Score=413.06 Aligned_cols=190 Identities=28% Similarity=0.361 Sum_probs=167.3
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcC-cCceeec
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK-PNGLLCV 77 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~-p~Gll~l 77 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..||++|.+|||+|..++| .||++|+|||+++ |.|||+|
T Consensus 449 ~IGvLDI~GFE~F~~NsFEQlCINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek~~p~Gilsl 528 (770)
T 1w9i_A 449 FIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILAL 528 (770)
T ss_dssp EEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGGGHHHHHHHHCTTTTCHHHH
T ss_pred eeeeccCccccccccCCHHHHHHHhhHHHHHHHHHhhhhHHHHHHhhccCCCceeeccccCcHHHHHHHhCCCCCchhhh
Confidence 69999999999999 999999999999999999999999999999999999999999 5999999999984 9999999
Q ss_pred ccccccccCCCCCceeeee----------eecCCC----CCccccCCCeeecCCCcceeehhH-------HHhhcCChHH
Q psy13375 78 LDDQANWSRGNPMVSCVFW----------MIKPTG----RGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNPMV 136 (204)
Q Consensus 78 LDee~~~p~~~d~~f~~~~----------~~k~~~----~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~~v 136 (204)
|||||++|+++|++|++++ +.+|+. +.+.||||.|+|++.||+++|+|. +|+.|+|++|
T Consensus 529 LDEec~~p~~tD~~f~~kL~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~v 608 (770)
T 1w9i_A 529 LDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVV 608 (770)
T ss_dssp HHHHHSSSSCCHHHHHHHHHHHHTTTSTTEECCSSCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHHTCSSTTH
T ss_pred hhhhhCCCCCChHHHHHHHHHHhcCCCCCccCCCCCCCceEeeccCccccccccChhhhccCcccHHHHHHHHhchHHHH
Confidence 9999999999999987652 445532 347999999999999999999764 5999999999
Q ss_pred HhhcccccC-CCccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 137 SCVFWMIKP-TGRGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 137 ~~LF~~~~~-~~~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+.||..... .++.++...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 609 ~~Lf~~~~~~~~~~k~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 664 (770)
T 1w9i_A 609 TKLFNDPNIASRAKKGANFITVAAQYKEQL--ASLMATLETTNPHFV---RCIIPNNKQLP 664 (770)
T ss_dssp HHHHHCHHHHCCCEETTEECCHHHHHHHHH--HHHHHHHHTSEEEEE---EEECSCSSCCS
T ss_pred HHHhhccCCCCCCCCCCCCcchhHHHHHHH--HHHHHHHHhcCceee---eeecCCccccc
Confidence 999975321 11222233478999999999 999999999999999 99999998753
No 5
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=100.00 E-value=5.9e-55 Score=422.27 Aligned_cols=190 Identities=23% Similarity=0.259 Sum_probs=164.5
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ ||||||||||||+||++|++++|..|+++|.+|||+|..++|.||++|+|||+++|.|||++||
T Consensus 451 ~IGILDI~GFE~f~~NsFEQLCINyaNEkLQq~Fn~~vF~~EqeeY~~EgI~w~~I~f~DN~~~idLie~kp~GIl~lLD 530 (1052)
T 4anj_A 451 FIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILD 530 (1052)
T ss_dssp EEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTCCCCCCCCCCCHHHHHHHHCTTTSHHHHHH
T ss_pred eEEEEecCCCcccccCcHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCcccCCcCCcHHHHHHHHcCcccHHHHHH
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCceeeee---------eecCC--------------CCCccccCCCeeecCCCcceeehh-------HHHh
Q psy13375 80 DQANWSRGNPMVSCVFW---------MIKPT--------------GRGETQWSPLVEGKPNGLLCVLDD-------QANW 129 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~---------~~k~~--------------~~~~~hyag~V~Y~~~~~l~~n~~-------~ll~ 129 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||.|+|++.||+++|+| .+|+
T Consensus 531 Ee~~~p~~tD~~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~ 610 (1052)
T 4anj_A 531 EENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLIC 610 (1052)
T ss_dssp HHHHSSSCCHHHHHHHHHHTTTTCTTEECGGGCSCSTTTTCCTTSEEEEEETTEEEEEECTTHHHHHBCCCCHHHHHHHH
T ss_pred HHhcCCCCcHHHHHHHHHHHhccCccccCCcccccccccccCCCCCeEEEcCCccEEEecCChhhhccccccHHHHHHHH
Confidence 99999999999988643 22221 134699999999999999999876 4599
Q ss_pred hcCChHHHhhcccccCCCc-----cccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 130 SRGNPMVSCVFWMIKPTGR-----GETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 130 ~S~n~~v~~LF~~~~~~~~-----~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
.|+|++|+.||......+. ..+...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 611 ~S~~~~i~~Lf~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 677 (1052)
T 4anj_A 611 ESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQL--NLLLDKLRSTGASFI---RCIKPNLKMTS 677 (1052)
T ss_dssp TCSCHHHHHTTCC----------------CCBHHHHHHHHH--HHHHHHHHTSEEEEE---EEECCCSSCCS
T ss_pred hCCcHHHHHhhhccccccccccCCCCCCCCccHHHHHHHHH--HHHHHHHcCcCCEEE---EEECCCccCCC
Confidence 9999999999975432221 12234468999999999 999999999999999 99999998754
No 6
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=100.00 E-value=1.8e-54 Score=410.10 Aligned_cols=189 Identities=30% Similarity=0.353 Sum_probs=163.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..||+||.+|||+|..++|.||++|+|||+++ .|||+|||
T Consensus 432 ~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~F~~EqeeY~~EgI~w~~i~f~DN~~~idLie~~-~GIlslLD 510 (795)
T 1w7j_A 432 FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLD 510 (795)
T ss_dssp EEEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCCCCCHHHHHHHHST-TSHHHHHH
T ss_pred eEEeeccCcccccCcCCHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCcccccCccccHHHHHHHHhc-CCHHHhhh
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred ccccccCCCCCceeeee----------eecCC----CCCccccCCCeeecCCCcceeehhH-------HHhhcC-ChHHH
Q psy13375 80 DQANWSRGNPMVSCVFW----------MIKPT----GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRG-NPMVS 137 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~----------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~-n~~v~ 137 (204)
|||++|+++|++|++++ +.+|+ .+.+.||||+|+|++.||+++|+|. +|+.|+ |++|+
T Consensus 511 Eec~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~~~~~v~ 590 (795)
T 1w7j_A 511 EECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590 (795)
T ss_dssp HHHTSTTCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSSCSHHH
T ss_pred hhccCCCCChHHHHHHHHHHhhccCCccccCCCCCCceEEEecceEEEEechhHHhhccccccHHHHHHHHhccccHHHH
Confidence 99999999999987643 44443 2346999999999999999999875 589999 99999
Q ss_pred hhcccccCC---C-----------------------ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCC
Q psy13375 138 CVFWMIKPT---G-----------------------RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPT 191 (204)
Q Consensus 138 ~LF~~~~~~---~-----------------------~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN 191 (204)
.||...... + +..+...+|++++|+.+| ++||++|++|+|||| ||||||
T Consensus 591 ~lf~~~~~~~~~~~~~~s~~~~~s~~~~~~~~~~~~~~~~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN 665 (795)
T 1w7j_A 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSL--HLLMETLNATTPHYV---RCIKPN 665 (795)
T ss_dssp HTTC---------------------------------------CCHHHHHHHHH--HHHHHHHHTSEEEEE---EEECCC
T ss_pred HHhccccccccccccccccccccccccccccccccccccCCCCCcHHHHHHHHH--HHHHHHHhcCCCeEE---EEeCCC
Confidence 999742210 0 112334578999999999 999999999999999 999999
Q ss_pred CCCCC
Q psy13375 192 GRGET 196 (204)
Q Consensus 192 ~~~~~ 196 (204)
+.+.+
T Consensus 666 ~~k~p 670 (795)
T 1w7j_A 666 DFKFP 670 (795)
T ss_dssp TTCCT
T ss_pred CcCCh
Confidence 98753
No 7
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=100.00 E-value=2.4e-54 Score=411.11 Aligned_cols=189 Identities=29% Similarity=0.410 Sum_probs=163.0
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcCcCceeecc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGKPNGLLCVL 78 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~p~Gll~lL 78 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..||+||.+|||+|..++| .||++|+|||++ |.|||+||
T Consensus 455 ~IGvLDI~GFE~f~~NsFEQlcINyaNEkLQq~Fn~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idLiek-p~GIlslL 533 (837)
T 1kk8_A 455 YIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEK-PMGILSIL 533 (837)
T ss_dssp EEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHS-TTSHHHHH
T ss_pred eEEEEecCCccccccccHHHHHHHHhhHHHHHHHHHhhhHHHHHHhhhcCCceeecccccCHHHHHHHHhc-CCcHHHHH
Confidence 69999999999999 999999999999999999999999999999999999999999 599999999996 89999999
Q ss_pred cccccccCCCCCceeeee----------eecCCC----------CCccccCCCeeecCCCcceeehhH-------HHhhc
Q psy13375 79 DDQANWSRGNPMVSCVFW----------MIKPTG----------RGETQWSPLVEGKPNGLLCVLDDQ-------ANWSR 131 (204)
Q Consensus 79 Dee~~~p~~~d~~f~~~~----------~~k~~~----------~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S 131 (204)
||||++|+++|++|++++ +.+|+. +.+.||||.|+|++.||+++|+|. +|+.|
T Consensus 534 DEec~~p~~tD~tf~~kl~~~~~~~~~~f~~p~~~~~k~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S 613 (837)
T 1kk8_A 534 EEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 613 (837)
T ss_dssp HHHTTCTTCCHHHHHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTC
T ss_pred HHHhcCCCCChHHHHHHHHHHhcCCCcCccCCCccccccccCCceEEeeccCcccccHHHHHHhccccccHHHHHHHHhc
Confidence 999999999999987642 445532 236999999999999999998774 59999
Q ss_pred CChHHHhhcccccCC---Ccccc---ccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 132 GNPMVSCVFWMIKPT---GRGET---QWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 132 ~n~~v~~LF~~~~~~---~~~~~---~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+|++|+.||...... +..++ ...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 614 ~~~~v~~Lf~~~~~~~g~~~~~k~~~~~~~Tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 679 (837)
T 1kk8_A 614 KEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESL--NKLMKNLYSTHPHFV---RCIIPNELKQP 679 (837)
T ss_dssp SSHHHHHHTCC------------------CCHHHHHHHHH--HHHHHHHTTEEEEEE---EEECCCSSCCT
T ss_pred hHHHHHHHhcccccccCCCCCCCCCCCCCCchHHHHHHHH--HHHHHHHHccCCeee---eeeCCCccCCc
Confidence 999999999854321 11111 23578999999999 999999999999999 99999998754
No 8
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=100.00 E-value=1.9e-53 Score=412.04 Aligned_cols=194 Identities=28% Similarity=0.382 Sum_probs=168.7
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhc--CcCceee
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG--KPNGLLC 76 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~--~p~Gll~ 76 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|..++| .||++|+|||++ +|.|||+
T Consensus 428 ~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~p~Gil~ 507 (995)
T 2ycu_A 428 FLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLA 507 (995)
T ss_dssp EEEEEECCCBCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCCCSCCCHHHHHHHHCCSSSCCHHH
T ss_pred eEEEeccccccccccchHHHHHHHhhHHHHHHHHHHhhhHHHHHHHhccCCCccccccccChHHHHHHHhccCCCCchhh
Confidence 69999999999999 999999999999999999999999999999999999999999 699999999998 4899999
Q ss_pred cccccccccCCCCCceeee---------eeecCC------CCCccccCCCeeecCCCcceeehhH-------HHhhcCCh
Q psy13375 77 VLDDQANWSRGNPMVSCVF---------WMIKPT------GRGETQWSPLVEGKPNGLLCVLDDQ-------ANWSRGNP 134 (204)
Q Consensus 77 lLDee~~~p~~~d~~f~~~---------~~~k~~------~~~~~hyag~V~Y~~~~~l~~n~~~-------ll~~S~n~ 134 (204)
||||||++|+++|++|+++ .|.+|+ .+.+.||||.|+|++.||+++|+|. +|+.|+|+
T Consensus 508 lLdee~~~p~~tD~~f~~kl~~~~~~~~~f~~~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~ 587 (995)
T 2ycu_A 508 LLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDR 587 (995)
T ss_dssp HHHHSSSSTTCCHHHHHHHHHHHHTTSTTEECCCTTTCCSSEEEEETTEEEEECCTTHHHHHHCCCCHHHHHHHHTCSSH
T ss_pred hhHHHhcCCCCchHHHHHHHHHhcCCCCCcccCCccCCCCeeEEECCCCCccccccchhhhccccccHHHHHHHHhCcHH
Confidence 9999999999999998864 255554 2346999999999999999999874 59999999
Q ss_pred HHHhhcccccCC--------------C-ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC-CC
Q psy13375 135 MVSCVFWMIKPT--------------G-RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET-QW 198 (204)
Q Consensus 135 ~v~~LF~~~~~~--------------~-~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~-~~ 198 (204)
+|+.||...... + +.++...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+ .|
T Consensus 588 ~v~~lf~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p~~f 662 (995)
T 2ycu_A 588 LTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESL--SRLMATLSNTNPSFV---RCIVPNHEKRAGKL 662 (995)
T ss_dssp HHHHHTSSCCSSCSCCC-------------CCCSSCCHHHHHHHHH--HHHHHHHHTSEEEEE---EEECCCSSCCTTCC
T ss_pred HHHHHhhcccccccccccccccccccccCcCCCCCCchHHHHHHHH--HHHHHHHHhcCccee---eeecCCcccccccc
Confidence 999999753210 1 111234578999999999 999999999999999 99999998743 44
Q ss_pred CC
Q psy13375 199 SP 200 (204)
Q Consensus 199 ~~ 200 (204)
++
T Consensus 663 d~ 664 (995)
T 2ycu_A 663 EP 664 (995)
T ss_dssp CT
T ss_pred CH
Confidence 43
No 9
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=100.00 E-value=2.3e-53 Score=414.07 Aligned_cols=189 Identities=30% Similarity=0.358 Sum_probs=164.4
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCcccccccCChhhHHHhhhcCcCceeeccc
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPNGLLCVLD 79 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~~dn~~~ldli~~~p~Gll~lLD 79 (204)
+||||||||||+|+ ||||||||||||+||++|++++|..|+++|.+|||+|..++|.||++|+|||+++ .|||+|||
T Consensus 432 ~IgvLDI~GFE~f~~NsFEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~dn~~~idlie~~-~Gil~lLd 510 (1080)
T 2dfs_A 432 FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLD 510 (1080)
T ss_dssp EEEEEEECCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCCCCCCCHHHHHHHHST-TSHHHHHH
T ss_pred eEEeeccCCccccCcCCHHHHHHHhhhHHHHHHHHHHhhHHHHHHHhhcCCccccccccccHHHHHHHhcC-Cceeeecc
Confidence 69999999999999 9999999999999999999999999999999999999999999999999999986 89999999
Q ss_pred ccccccCCCCCceeeee----------eecCC----CCCccccCCCeeecCCCcceeehh-------HHHhhc-CChHHH
Q psy13375 80 DQANWSRGNPMVSCVFW----------MIKPT----GRGETQWSPLVEGKPNGLLCVLDD-------QANWSR-GNPMVS 137 (204)
Q Consensus 80 ee~~~p~~~d~~f~~~~----------~~k~~----~~~~~hyag~V~Y~~~~~l~~n~~-------~ll~~S-~n~~v~ 137 (204)
|||++|+++|++|++++ |.+|+ .+.+.||||+|+|++.||+++|.| .+|+.| +|++|+
T Consensus 511 ee~~~p~~tD~~f~~kl~~~~~~~~~~f~~p~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~v~ 590 (1080)
T 2dfs_A 511 EECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590 (1080)
T ss_dssp HHTTSTTCCHHHHHHHHHHHHBTTBSSEECCTTCSSEEEEECSSCEEEEECTTHHHHHBCCCCHHHHHHHHTCSSCSHHH
T ss_pred ccccCCCCChHHHHHHHHHHhhcCCCCccCCCCCCCceEEEecceEEEEehhhHHHhccccccHHHHHHHHcccccHHHH
Confidence 99999999999987533 44553 235799999999999999999987 569999 999999
Q ss_pred hhcccccCC--------------C------------ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCC
Q psy13375 138 CVFWMIKPT--------------G------------RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPT 191 (204)
Q Consensus 138 ~LF~~~~~~--------------~------------~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN 191 (204)
.||...... + ...+...+|++++|+.+| ++||++|++|+|||| ||||||
T Consensus 591 ~lf~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN 665 (1080)
T 2dfs_A 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSL--HLLMETLNATTPHYV---RCIKPN 665 (1080)
T ss_dssp HSCC-------------------------------------CCCBHHHHHHHHH--HHHHHHHHSSEEEEE---EEECCC
T ss_pred HHhcccccccccccccccccccccccccccccccccccccCCCCcHHHHHHHHH--HHHHHHHHhcCCeeE---EEecCC
Confidence 999742210 0 112334678999999999 999999999999999 999999
Q ss_pred CCCCC
Q psy13375 192 GRGET 196 (204)
Q Consensus 192 ~~~~~ 196 (204)
+.+.+
T Consensus 666 ~~k~p 670 (1080)
T 2dfs_A 666 DFKFP 670 (1080)
T ss_dssp SSCCT
T ss_pred CCCCc
Confidence 98743
No 10
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=100.00 E-value=4.5e-53 Score=409.41 Aligned_cols=190 Identities=28% Similarity=0.357 Sum_probs=167.4
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhc-CcCceeec
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEG-KPNGLLCV 77 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~-~p~Gll~l 77 (204)
+||||||||||+|+ +|||||||||||+||++|++++|..|+++|.+|||+|..++| .||++|+|||++ +|.|||+|
T Consensus 449 ~IgvLDI~GFE~f~~NsfEQlcINy~NEkLQq~F~~~~f~~EqeeY~~EgI~w~~i~f~~dn~~~idlie~~~~~Gil~l 528 (1010)
T 1g8x_A 449 FIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQATIDLIDGRQPPGILAL 528 (1010)
T ss_dssp EEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCSHHHHHHHHCTTTTCHHHH
T ss_pred eeeeccCcccccCCcCcHHHHHHHhhhHHHHHHHHHHhhHHHHHHhhccCCCccccccccChHHHHHHHhcCCCCeeehh
Confidence 69999999999999 999999999999999999999999999999999999999999 599999999998 49999999
Q ss_pred ccccccccCCCCCceeeee----------eecCCC----CCccccCCCeeecCCCcceeehh-------HHHhhcCChHH
Q psy13375 78 LDDQANWSRGNPMVSCVFW----------MIKPTG----RGETQWSPLVEGKPNGLLCVLDD-------QANWSRGNPMV 136 (204)
Q Consensus 78 LDee~~~p~~~d~~f~~~~----------~~k~~~----~~~~hyag~V~Y~~~~~l~~n~~-------~ll~~S~n~~v 136 (204)
|||||++|+++|++|++++ |.+|+. +.+.||||.|+|++.||+++|+| .+|+.|+|++|
T Consensus 529 Ldee~~~p~~td~~f~~kl~~~~~~~~~~f~~~~~~~~~F~i~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~~ 608 (1010)
T 1g8x_A 529 LDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVV 608 (1010)
T ss_dssp HHHHTTSSSCCHHHHHHHHHHHHTTTCTTEECCTTCSSEEEEEETTEEEEEECTTHHHHHHCCCCHHHHHHHTTCSCHHH
T ss_pred hhHHhCCCCCChHHHHHHHHHHhcCCCCCcccCCCCCCCEEEeeeceEEEEeecCccccccccccHHHHHHHHhCcHHHH
Confidence 9999999999999987542 445532 34799999999999999999987 45899999999
Q ss_pred HhhcccccCCC-ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 137 SCVFWMIKPTG-RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 137 ~~LF~~~~~~~-~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+.||......+ +.++...+|++++|+.+| ++||++|++|+|||| ||||||+.+.+
T Consensus 609 ~~lf~~~~~~~~~~k~~~~~tv~~~fk~sL--~~Lm~~L~~t~phfV---RCIkPN~~k~p 664 (1010)
T 1g8x_A 609 TKLFNDPNIASRAKKGANFITVAAQYKEQL--ASLMATLETTNPHFV---RCIIPNNKQLP 664 (1010)
T ss_dssp HHHHHCHHHHSCCCCSSSCCCHHHHHHHHH--HHHHHHHTTSEEEEE---EEECSCSSCCT
T ss_pred HHHhcccccccCCCCCCCCCchHHHHHHHH--HHHHHHHHhcCCeee---eeecCCccccc
Confidence 99997543111 222234579999999999 999999999999999 99999998753
No 11
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=100.00 E-value=2.2e-52 Score=411.84 Aligned_cols=190 Identities=26% Similarity=0.331 Sum_probs=164.1
Q ss_pred ccceeecCCCCCcc--hhhHHHHHhhhHHHHHHHHHHHhhhhHhHhhhcCCccccccc-CChhhHHHhhhcC--cCceee
Q psy13375 2 DAPRSDLCGIVDRG--SFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLVEGK--PNGLLC 76 (204)
Q Consensus 2 sIgilDi~GFe~~~--~feql~iN~~nE~lq~~~~~~~f~~~~~~y~~Egi~~~~~~~-~dn~~~ldli~~~--p~Gll~ 76 (204)
+||||||||||+|. ||||||||||||+||++|++++|..|+++|..|||+|.+++| .||++|+|||+++ |.|||+
T Consensus 459 ~IgvLDi~GFE~f~~NsfeQlciNy~nEkLq~~f~~~~f~~eq~ey~~Egi~~~~i~~~~dn~~~~~lie~~~~~~Gil~ 538 (1184)
T 1i84_S 459 FLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLA 538 (1184)
T ss_dssp EEEEEECCCCCCCSSBCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCSCCCCCCCCCCHHHHHTTSCCSSSCCHHH
T ss_pred eEEEeecCCcCCCCcchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCccccccCCCcHHHHHHHhCCCCCCCchh
Confidence 69999999999999 999999999999999999999999999999999999999999 5999999999963 349999
Q ss_pred cccccccccCCCCCceeeee---------eecCCC------CCccccCCCeeecCCCcceeehh-------HHHhhcCCh
Q psy13375 77 VLDDQANWSRGNPMVSCVFW---------MIKPTG------RGETQWSPLVEGKPNGLLCVLDD-------QANWSRGNP 134 (204)
Q Consensus 77 lLDee~~~p~~~d~~f~~~~---------~~k~~~------~~~~hyag~V~Y~~~~~l~~n~~-------~ll~~S~n~ 134 (204)
||||||++|+++|.+|+.++ |.+|+. +.+.||||.|+|++.||+++|+| .+|+.|+|+
T Consensus 539 lLdee~~~p~~td~~~~~kl~~~~~~~~~~~~~~~~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~l~~~~~~ll~~s~~~ 618 (1184)
T 1i84_S 539 LLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618 (1184)
T ss_dssp HHHHTTSCTTCCHHHHHHHHHHHTSSCTTEEECSSCTTTCEEEEECSSCEEEEECTTHHHHHHCCCCHHHHHHHHTCSCH
T ss_pred hhhhhhCCCCCChHHHHHHHHHHhCCCCCccCCCCCCCCCcEEEECCCceEEeccCCchhhccCcccHHHHHHHHhCchH
Confidence 99999999999999987643 455542 34699999999999999999985 458999999
Q ss_pred HHHhhcccccCC--------------C---ccccccCCccccccccccchhHHHHHhccCCCeEEeecccccCCCCCCC
Q psy13375 135 MVSCVFWMIKPT--------------G---RGETQWSPLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPTGRGET 196 (204)
Q Consensus 135 ~v~~LF~~~~~~--------------~---~~~~~~~~~~~s~~~~~l~~~~L~~~l~~~~~~FV~~~rCikPN~~~~~ 196 (204)
+|+.||...... + +.++...+|++++|+.+| +.||++|++|+|||| ||||||+.+.+
T Consensus 619 ~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~f~~~l--~~L~~~l~~t~phfv---RCIkPN~~k~p 692 (1184)
T 1i84_S 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQL--TKLMTTLRNTNPNFV---RCIIPNHEKRA 692 (1184)
T ss_dssp HHHHHHSCCTTCCCC---------------------CCCHHHHHHHHH--HHHHHHHTTSEEEEC---CEECCCSSCCS
T ss_pred HHHHHhccccccccccccccccccccCccccccCCCCCcHHHHHHHHH--HHHHHHHHhcCCCce---eeeCCCCcCCC
Confidence 999999753210 1 112223478999999999 999999999999999 99999999753
No 12
>4e2i_2 DNA polymerase alpha subunit B; replication initiation, hydrolase-DNA binding complex, hydro binding protein complex; HET: DNA; 5.00A {Homo sapiens}
Probab=23.52 E-value=21 Score=23.79 Aligned_cols=20 Identities=20% Similarity=0.554 Sum_probs=15.5
Q ss_pred eecCCCCCcc----hhhHHHHHhh
Q psy13375 6 SDLCGIVDRG----SFEQLCINYA 25 (204)
Q Consensus 6 lDi~GFe~~~----~feql~iN~~ 25 (204)
||+||.+..+ -..+||+.|-
T Consensus 12 l~~Fgi~c~d~v~eKl~ElC~~y~ 35 (78)
T 4e2i_2 12 LQIFGLDCEEALIEKLVELCVQYG 35 (78)
T ss_dssp HHHTTCCCCHHHHHHHHTHHHHSC
T ss_pred HHHcCCCCcHHHHHHHHHHHHHcC
Confidence 6889998776 5677888775
No 13
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=21.08 E-value=77 Score=25.04 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=19.6
Q ss_pred ccceeecCCCCCcc----hhhHHHHHhhhHHHHHHH
Q psy13375 2 DAPRSDLCGIVDRG----SFEQLCINYANEHLQYYF 33 (204)
Q Consensus 2 sIgilDi~GFe~~~----~feql~iN~~nE~lq~~~ 33 (204)
.+.|+|+|||..+. .+.. .++|..++...++
T Consensus 66 ~l~liDTpG~~d~~~~~~~~~~-i~~~i~~~~~~~l 100 (274)
T 3t5d_A 66 LLTIVDTPGFGDAVDNSNCWQP-VIDYIDSKFEDYL 100 (274)
T ss_dssp EEEEEECCCCSCCSCCTTTTHH-HHHHHHHHHHHHH
T ss_pred EEEEEECCCccccccchhhHHH-HHHHHHHHHHHHH
Confidence 46799999996543 3433 3466666655544
Done!