Query psy13376
Match_columns 417
No_of_seqs 583 out of 3205
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 17:53:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13376.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13376hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4194|consensus 99.9 2.3E-26 4.9E-31 227.7 0.6 318 55-390 80-413 (873)
2 KOG4194|consensus 99.9 2.5E-26 5.3E-31 227.4 0.4 299 57-374 56-370 (873)
3 PF14580 LRR_9: Leucine-rich r 99.8 3.4E-22 7.4E-27 176.7 2.9 161 79-239 3-166 (175)
4 KOG0444|consensus 99.7 2E-18 4.3E-23 172.7 -2.5 262 59-342 61-358 (1255)
5 PRK15387 E3 ubiquitin-protein 99.6 2.1E-16 4.7E-21 168.0 7.0 132 58-202 247-378 (788)
6 PLN00113 leucine-rich repeat r 99.6 3.7E-17 8.1E-22 182.3 -2.9 148 72-223 92-246 (968)
7 KOG4237|consensus 99.6 1.6E-17 3.5E-22 158.7 -5.0 279 59-351 52-350 (498)
8 KOG0472|consensus 99.6 5.3E-17 1.1E-21 155.5 -1.6 140 59-201 166-312 (565)
9 PLN00113 leucine-rich repeat r 99.6 4.7E-17 1E-21 181.5 -2.7 163 58-224 123-295 (968)
10 PRK15387 E3 ubiquitin-protein 99.6 3.1E-15 6.8E-20 159.2 10.0 203 3-225 237-457 (788)
11 KOG0472|consensus 99.6 3.9E-17 8.5E-22 156.3 -5.0 160 59-225 143-309 (565)
12 KOG1259|consensus 99.6 1.8E-16 3.9E-21 146.8 -1.6 154 72-225 283-441 (490)
13 KOG0444|consensus 99.6 2E-16 4.3E-21 158.6 -1.6 255 60-336 39-304 (1255)
14 PF14580 LRR_9: Leucine-rich r 99.6 2.3E-15 4.9E-20 133.2 4.0 139 60-200 4-152 (175)
15 KOG0617|consensus 99.5 5.6E-16 1.2E-20 133.1 -1.8 143 59-203 39-190 (264)
16 KOG4237|consensus 99.5 3.8E-15 8.2E-20 142.6 1.4 137 77-219 50-194 (498)
17 KOG0618|consensus 99.5 6.7E-16 1.4E-20 161.0 -5.0 309 13-346 183-499 (1081)
18 KOG0617|consensus 99.5 1.9E-15 4.1E-20 129.9 -3.4 154 65-224 23-184 (264)
19 KOG3207|consensus 99.4 2.3E-14 5E-19 138.9 2.1 217 6-238 144-379 (505)
20 KOG1644|consensus 99.4 2.1E-13 4.6E-18 120.1 5.3 140 96-235 20-162 (233)
21 KOG0618|consensus 99.4 5.9E-14 1.3E-18 146.6 1.3 310 7-365 113-448 (1081)
22 PRK15370 E3 ubiquitin-protein 99.4 2E-13 4.4E-18 146.0 5.3 182 8-203 199-384 (754)
23 PRK15370 E3 ubiquitin-protein 99.3 1.1E-12 2.5E-17 140.2 5.8 205 8-225 220-427 (754)
24 KOG1259|consensus 99.3 6.7E-13 1.5E-17 123.4 -0.8 126 53-178 284-416 (490)
25 KOG1859|consensus 99.2 2.1E-13 4.7E-18 139.1 -7.8 140 72-212 163-305 (1096)
26 KOG3207|consensus 99.1 5.7E-12 1.2E-16 122.5 -1.3 189 72-263 171-377 (505)
27 KOG0531|consensus 99.1 9.6E-12 2.1E-16 126.0 0.1 119 60-178 79-203 (414)
28 KOG2982|consensus 99.1 2.8E-11 6E-16 112.6 2.8 189 58-246 76-312 (418)
29 cd00116 LRR_RI Leucine-rich re 99.1 3.6E-11 7.9E-16 116.8 2.1 29 319-347 274-302 (319)
30 cd00116 LRR_RI Leucine-rich re 99.0 9.3E-11 2E-15 114.0 3.0 184 72-255 80-293 (319)
31 COG4886 Leucine-rich repeat (L 99.0 7.7E-11 1.7E-15 118.5 2.5 161 57-224 120-288 (394)
32 COG4886 Leucine-rich repeat (L 99.0 1.7E-10 3.8E-15 116.0 4.2 146 55-203 142-294 (394)
33 KOG0531|consensus 99.0 7.2E-11 1.6E-15 119.6 0.1 131 72-203 71-203 (414)
34 KOG2123|consensus 99.0 5.1E-11 1.1E-15 109.9 -1.0 119 115-233 17-137 (388)
35 PLN03210 Resistant to P. syrin 98.9 2.8E-09 6E-14 120.9 10.4 145 72-224 724-904 (1153)
36 KOG0532|consensus 98.9 1.2E-10 2.6E-15 116.7 -3.1 159 60-223 105-270 (722)
37 KOG0532|consensus 98.9 2.5E-10 5.5E-15 114.3 -0.9 100 75-175 145-248 (722)
38 PLN03210 Resistant to P. syrin 98.8 1.9E-08 4.1E-13 114.2 11.6 157 58-224 594-758 (1153)
39 PF13855 LRR_8: Leucine rich r 98.8 6.1E-09 1.3E-13 75.9 3.3 54 119-172 3-60 (61)
40 PF13855 LRR_8: Leucine rich r 98.7 1.1E-08 2.4E-13 74.5 3.9 59 139-198 1-61 (61)
41 KOG2739|consensus 98.7 8.7E-09 1.9E-13 94.8 2.0 119 113-231 39-161 (260)
42 KOG1644|consensus 98.6 4.5E-08 9.8E-13 86.8 5.4 112 59-170 25-149 (233)
43 KOG1859|consensus 98.6 9.3E-10 2E-14 113.0 -6.3 119 57-176 168-294 (1096)
44 KOG1909|consensus 98.5 8.3E-08 1.8E-12 91.5 4.4 181 72-252 91-310 (382)
45 KOG1909|consensus 98.5 9.8E-08 2.1E-12 91.0 3.2 128 72-199 156-311 (382)
46 PF12799 LRR_4: Leucine Rich r 98.3 5.1E-07 1.1E-11 61.0 3.1 38 96-133 2-40 (44)
47 PF12799 LRR_4: Leucine Rich r 98.3 6E-07 1.3E-11 60.7 2.9 39 140-178 2-41 (44)
48 PLN03150 hypothetical protein; 98.2 1.7E-06 3.7E-11 92.1 7.2 100 97-198 420-527 (623)
49 KOG4579|consensus 98.2 3.6E-08 7.8E-13 82.3 -4.9 104 97-202 29-139 (177)
50 PLN03150 hypothetical protein; 98.1 3.7E-06 7.9E-11 89.6 6.7 100 74-173 419-527 (623)
51 KOG2982|consensus 98.1 1.4E-06 3.1E-11 81.6 2.7 156 72-229 70-240 (418)
52 KOG2123|consensus 98.1 1.9E-07 4.1E-12 86.6 -4.0 100 93-192 17-123 (388)
53 KOG4579|consensus 98.0 1.8E-07 3.9E-12 78.2 -4.5 129 73-203 27-163 (177)
54 KOG4658|consensus 98.0 6.3E-06 1.4E-10 90.3 5.1 125 72-197 522-653 (889)
55 KOG3665|consensus 98.0 3.6E-06 7.8E-11 89.9 2.6 129 72-200 121-264 (699)
56 KOG3665|consensus 97.9 9.2E-06 2E-10 86.9 3.7 132 63-194 138-283 (699)
57 KOG2739|consensus 97.7 1.3E-05 2.8E-10 74.1 1.6 101 93-193 41-150 (260)
58 KOG4658|consensus 97.7 3.4E-05 7.5E-10 84.6 4.5 136 83-223 511-652 (889)
59 COG5238 RNA1 Ran GTPase-activa 97.7 8E-05 1.7E-09 69.3 5.9 183 72-254 91-317 (388)
60 PF13306 LRR_5: Leucine rich r 97.5 0.00022 4.7E-09 59.5 6.6 115 91-215 8-128 (129)
61 PRK15386 type III secretion pr 97.4 0.00047 1E-08 68.8 8.4 70 72-150 51-123 (426)
62 KOG2120|consensus 97.4 4.6E-06 1E-10 78.3 -5.6 64 158-224 310-374 (419)
63 COG5238 RNA1 Ran GTPase-activa 97.4 0.00021 4.5E-09 66.6 4.7 154 72-225 29-226 (388)
64 PRK15386 type III secretion pr 97.3 0.00087 1.9E-08 67.0 8.6 130 56-197 55-188 (426)
65 KOG2120|consensus 97.2 3E-05 6.6E-10 72.9 -2.6 149 73-225 185-350 (419)
66 PF13306 LRR_5: Leucine rich r 97.2 0.0012 2.5E-08 55.0 6.6 111 72-189 11-129 (129)
67 KOG3763|consensus 96.1 0.0032 6.8E-08 64.1 2.4 89 137-226 216-314 (585)
68 PF13504 LRR_7: Leucine rich r 93.7 0.042 9.2E-07 28.9 1.4 13 119-131 3-15 (17)
69 PF00560 LRR_1: Leucine Rich R 93.6 0.026 5.7E-07 31.8 0.6 15 119-133 2-16 (22)
70 PF13504 LRR_7: Leucine rich r 92.3 0.099 2.2E-06 27.5 1.5 11 163-173 3-13 (17)
71 PF00560 LRR_1: Leucine Rich R 91.3 0.12 2.7E-06 29.0 1.3 16 163-178 2-17 (22)
72 KOG0473|consensus 91.1 0.0056 1.2E-07 56.1 -6.7 82 91-172 38-122 (326)
73 KOG0473|consensus 91.0 0.0067 1.5E-07 55.6 -6.3 85 113-199 38-124 (326)
74 KOG4308|consensus 90.9 0.048 1E-06 56.2 -1.2 130 73-202 144-306 (478)
75 KOG1947|consensus 90.8 0.1 2.2E-06 53.3 1.2 106 94-199 187-308 (482)
76 KOG4308|consensus 88.8 0.024 5.2E-07 58.4 -5.2 153 72-224 114-301 (478)
77 smart00370 LRR Leucine-rich re 88.1 0.38 8.3E-06 28.0 1.8 17 117-133 2-18 (26)
78 smart00369 LRR_TYP Leucine-ric 88.1 0.38 8.3E-06 28.0 1.8 17 117-133 2-18 (26)
79 smart00365 LRR_SD22 Leucine-ri 87.5 0.45 9.8E-06 28.0 1.8 16 118-133 3-18 (26)
80 KOG1947|consensus 86.2 0.6 1.3E-05 47.6 3.2 110 114-226 185-308 (482)
81 KOG3763|consensus 86.0 0.4 8.6E-06 49.3 1.7 85 114-200 215-313 (585)
82 smart00370 LRR Leucine-rich re 85.7 0.62 1.3E-05 27.1 1.8 18 161-178 2-19 (26)
83 smart00369 LRR_TYP Leucine-ric 85.7 0.62 1.3E-05 27.1 1.8 18 161-178 2-19 (26)
84 KOG3864|consensus 85.1 0.61 1.3E-05 42.1 2.2 81 140-223 102-186 (221)
85 smart00365 LRR_SD22 Leucine-ri 84.8 0.72 1.6E-05 27.2 1.7 19 95-113 2-20 (26)
86 KOG3864|consensus 83.8 0.22 4.8E-06 44.9 -1.1 81 118-199 102-189 (221)
87 KOG4341|consensus 80.9 1.2 2.6E-05 44.5 2.6 160 72-233 267-446 (483)
88 smart00364 LRR_BAC Leucine-ric 77.9 1.4 3E-05 26.0 1.2 17 118-134 3-19 (26)
89 PF13516 LRR_6: Leucine Rich r 72.5 1.8 3.9E-05 24.5 0.8 16 160-175 1-16 (24)
90 smart00446 LRRcap occurring C- 66.1 3.6 7.7E-05 24.2 1.1 21 202-222 2-22 (26)
91 KOG4341|consensus 65.2 7.8 0.00017 38.9 3.9 112 115-226 292-414 (483)
92 smart00368 LRR_RI Leucine rich 56.9 7.5 0.00016 23.1 1.4 15 161-175 2-16 (28)
93 TIGR00864 PCC polycystin catio 47.7 13 0.00029 45.7 2.7 29 146-174 2-32 (2740)
94 TIGR00864 PCC polycystin catio 26.6 40 0.00087 41.9 2.1 30 101-130 1-32 (2740)
No 1
>KOG4194|consensus
Probab=99.92 E-value=2.3e-26 Score=227.66 Aligned_cols=318 Identities=21% Similarity=0.195 Sum_probs=216.2
Q ss_pred ccccccccCCcchhhhh----cccccEEEeecCCCCCCCCcCCCcc-cceEeeeCCCCCCcCC--CCCCccCceeeeeCC
Q psy13376 55 LLSLLQESTNLAEKLQI----YKLIKAVNLRIKTLRKIENLWMMEN-LVELDLSMNHIGVIEN--LDQLVCLEKLDLGYN 127 (417)
Q Consensus 55 ~~~l~~~~n~i~~l~~l----l~~L~~L~Ls~N~i~~i~~l~~l~~-L~~L~Ls~N~l~~l~~--l~~l~~L~~L~Ls~N 127 (417)
..+|++++|++..+... +++|+.+++.+|.++.+|.++.... |+.|+|.+|.|+++.+ +..++.|+.||||.|
T Consensus 80 t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 80 TQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 34567777777766544 7778888888888888877665544 8888888888887753 777788888888888
Q ss_pred CCCcccC--CccccccceeEeecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 128 RIEQIQG--LDTLVNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 128 ~l~~l~~--~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
.|++++. |..-+++++|+|++|.|+.+. .|.++.+|..|.|++|+|+.+|. ..|+++++|+.|+|..|.|.....
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~-r~Fk~L~~L~~LdLnrN~irive~ 238 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQ-RSFKRLPKLESLDLNRNRIRIVEG 238 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCH-HHhhhcchhhhhhccccceeeehh
Confidence 8887774 666677888888888888774 57777788888888888888776 466778888888888887766543
Q ss_pred ccHHHHhcCCCcccccCcccCHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhhHHhhhccCCCchhhhh
Q psy13376 204 VDGFAIAMVPQLQCYNNHIILEDERRTALEQHMYDVRTETLKDLMVQRERQNALASQRKSEEKSKAFVENLEGDFLFNVQ 283 (417)
Q Consensus 204 ~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~l~~~~ 283 (417)
..+..+++|+.|.+.++. +....+..|..+.+++.+++..|+.....+.-...+..++..++++.....+.-.-
T Consensus 239 ---ltFqgL~Sl~nlklqrN~---I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~ 312 (873)
T KOG4194|consen 239 ---LTFQGLPSLQNLKLQRND---ISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS 312 (873)
T ss_pred ---hhhcCchhhhhhhhhhcC---cccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch
Confidence 356677777777666655 44445556666777777777777776665555556666666666655422221111
Q ss_pred hccChhhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhHHHHHHhhH
Q psy13376 284 FENDVEGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLRQNEVDEFQAVYRALKLKSCHEAVKNKT 363 (417)
Q Consensus 284 ~~~~~~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~~l~~~~F~~~~~~~~~~~~~~~~~~~~ 363 (417)
|.-.+....|. +..|.|++++++.|..+++|++|+|++|+|..+.+++|...--..+.+...+..-|..
T Consensus 313 WsftqkL~~Ld-----------Ls~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~I 381 (873)
T KOG4194|consen 313 WSFTQKLKELD-----------LSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCI 381 (873)
T ss_pred hhhcccceeEe-----------ccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEE
Confidence 11111111222 3467788888888998999999999999999999999888776666666665555555
Q ss_pred H-----hhchhhHHHhhhccccchHHHHHhhh
Q psy13376 364 R-----YRVHPMLYEILSNEEALDDALMNSFG 390 (417)
Q Consensus 364 ~-----~~~~~~l~~~~~~~~~l~~~~~~~~~ 390 (417)
+ |...+.|+.+-...+.||...-++|.
T Consensus 382 EDaa~~f~gl~~LrkL~l~gNqlk~I~krAfs 413 (873)
T KOG4194|consen 382 EDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFS 413 (873)
T ss_pred ecchhhhccchhhhheeecCceeeecchhhhc
Confidence 4 77777776442233444444444443
No 2
>KOG4194|consensus
Probab=99.91 E-value=2.5e-26 Score=227.39 Aligned_cols=299 Identities=18% Similarity=0.177 Sum_probs=246.9
Q ss_pred ccccccCCcchh-----hhh-cccccEEEeecCCCCCCCC--cCCCcccceEeeeCCCCCCcCCCCCCc-cCceeeeeCC
Q psy13376 57 SLLQESTNLAEK-----LQI-YKLIKAVNLRIKTLRKIEN--LWMMENLVELDLSMNHIGVIENLDQLV-CLEKLDLGYN 127 (417)
Q Consensus 57 ~l~~~~n~i~~l-----~~l-l~~L~~L~Ls~N~i~~i~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~-~L~~L~Ls~N 127 (417)
.++.+.+.+..+ .+. .+..+.|++++|.+..+.. |.++++|+++++..|.++.+|.++... +|+.|+|.+|
T Consensus 56 lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt~IP~f~~~sghl~~L~L~~N 135 (873)
T KOG4194|consen 56 LLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELTRIPRFGHESGHLEKLDLRHN 135 (873)
T ss_pred eeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhhhcccccccccceeEEeeecc
Confidence 345666777665 444 6677889999999999865 889999999999999999999877665 6999999999
Q ss_pred CCCcccC--CccccccceeEeecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 128 RIEQIQG--LDTLVNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 128 ~l~~l~~--~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
.|+++.+ ++.++.|+.||||.|.|+.++ .|..-.++++|+|++|.|+++.. ..|..+.+|..|.|+.|+++.+|.
T Consensus 136 ~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~-~~F~~lnsL~tlkLsrNrittLp~ 214 (873)
T KOG4194|consen 136 LISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLET-GHFDSLNSLLTLKLSRNRITTLPQ 214 (873)
T ss_pred ccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccc-ccccccchheeeecccCcccccCH
Confidence 9999985 999999999999999999996 57777899999999999999876 678899999999999999999997
Q ss_pred ccHHHHhcCCCcccccCcccCHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhhHHhhhccCCCchhhh-
Q psy13376 204 VDGFAIAMVPQLQCYNNHIILEDERRTALEQHMYDVRTETLKDLMVQRERQNALASQRKSEEKSKAFVENLEGDFLFNV- 282 (417)
Q Consensus 204 ~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~l~~~- 282 (417)
+++.++|+|+.||+.++. ++..+...|.++..++.+.++.|.+...+...+..+.++....+++.....+-++
T Consensus 215 ---r~Fk~L~~L~~LdLnrN~---irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~ 288 (873)
T KOG4194|consen 215 ---RSFKRLPKLESLDLNRNR---IRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGW 288 (873)
T ss_pred ---HHhhhcchhhhhhccccc---eeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhccc
Confidence 788899999999998887 4455677889999999998888888766666666666666666665543333222
Q ss_pred hhccChhhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhHHHHHHhh
Q psy13376 283 QFENDVEGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLRQNEVDEFQAVYRALKLKSCHEAVKNK 362 (417)
Q Consensus 283 ~~~~~~~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~~l~~~~F~~~~~~~~~~~~~~~~~~~ 362 (417)
+|.+. ....|. ...|.|++|+.+.++.|++|++||||+|+|.+++++.|...-+.-.....++++.-+
T Consensus 289 lfgLt-~L~~L~-----------lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l 356 (873)
T KOG4194|consen 289 LFGLT-SLEQLD-----------LSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHL 356 (873)
T ss_pred ccccc-hhhhhc-----------cchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHH
Confidence 33222 222222 346779999999999999999999999999999999999999888888888888887
Q ss_pred HH--hhchhhHHHh
Q psy13376 363 TR--YRVHPMLYEI 374 (417)
Q Consensus 363 ~~--~~~~~~l~~~ 374 (417)
.+ |....+|.++
T Consensus 357 ~e~af~~lssL~~L 370 (873)
T KOG4194|consen 357 AEGAFVGLSSLHKL 370 (873)
T ss_pred HhhHHHHhhhhhhh
Confidence 76 7788888766
No 3
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.84 E-value=3.4e-22 Score=176.66 Aligned_cols=161 Identities=35% Similarity=0.488 Sum_probs=74.0
Q ss_pred EeecCCCCCCCCcCCCcccceEeeeCCCCCCcCCCC-CCccCceeeeeCCCCCcccCCccccccceeEeecCCCCCcC-C
Q psy13376 79 NLRIKTLRKIENLWMMENLVELDLSMNHIGVIENLD-QLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETIE-G 156 (417)
Q Consensus 79 ~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~-~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l~-~ 156 (417)
.+..+.|..++.+.+..++++|+|++|.|+.++.++ .+.+|+.|++++|.|+.++++..++.|++|++++|+|++++ .
T Consensus 3 ~lt~~~i~~~~~~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~ 82 (175)
T PF14580_consen 3 RLTANMIEQIAQYNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEG 82 (175)
T ss_dssp ---------------------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHH
T ss_pred cccccccccccccccccccccccccccccccccchhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccc
Confidence 456677888888888888999999999999998887 68899999999999999999999999999999999999996 3
Q ss_pred C-CCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCHHHHHHHHHHH
Q psy13376 157 L-DHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILEDERRTALEQH 235 (417)
Q Consensus 157 l-~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~ 235 (417)
+ ..+++|+.|++++|+|.++..+..++.+++|+.|++.+||++..+.|+.+++..+|+|+.||...++..|+..|..+|
T Consensus 83 l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~~V~~~ER~~A~~~f 162 (175)
T PF14580_consen 83 LDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQDVTEEERQEAEKLF 162 (175)
T ss_dssp HHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTEETTS-B--------
T ss_pred hHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCEEccHHHhccccccc
Confidence 4 468999999999999999988888999999999999999999999999999999999999999999999999999988
Q ss_pred hhhh
Q psy13376 236 MYDV 239 (417)
Q Consensus 236 ~~~l 239 (417)
.+..
T Consensus 163 ~~~~ 166 (175)
T PF14580_consen 163 KGKR 166 (175)
T ss_dssp ----
T ss_pred cccc
Confidence 7643
No 4
>KOG0444|consensus
Probab=99.68 E-value=2e-18 Score=172.72 Aligned_cols=262 Identities=17% Similarity=0.161 Sum_probs=147.3
Q ss_pred ccccCCcchhhhh---cccccEEEeecCCCCC--CCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCc
Q psy13376 59 LQESTNLAEKLQI---YKLIKAVNLRIKTLRK--IEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQ 131 (417)
Q Consensus 59 ~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~--i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~ 131 (417)
..+.|++.++.+- ++.|+.+.+.+|++.. +|. +..+..|+.||||+|+++.+|. +..-.++-+|+||+|+|.+
T Consensus 61 s~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~Iet 140 (1255)
T KOG0444|consen 61 SMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIET 140 (1255)
T ss_pred hhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCcccc
Confidence 3445555554443 4444444555554432 222 4444455555555555554442 4444444455555555555
Q ss_pred ccC--CccccccceeEeecCCCCCcC-CCCC------------------------CCCCcEEeccCCccC--cchhhhhh
Q psy13376 132 IQG--LDTLVNLKVLNLKMNRIETIE-GLDH------------------------LEKLELFNIAANRIQ--SLASLVYL 182 (417)
Q Consensus 132 l~~--~~~l~~L~~L~Ls~N~i~~l~-~l~~------------------------l~~L~~L~Ls~N~i~--~l~~~~~l 182 (417)
||. |-++..|-.|+||+|++..+| .+.. +++|++|.+++.+-+ .+| ..+
T Consensus 141 IPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~P--tsl 218 (1255)
T KOG0444|consen 141 IPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIP--TSL 218 (1255)
T ss_pred CCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCC--Cch
Confidence 543 444444445555555544443 2333 444445555444322 222 245
Q ss_pred hCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHHH
Q psy13376 183 RRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILEDERRTALEQHMYDVRTETLKDLMVQRERQNALASQRK 262 (417)
Q Consensus 183 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~ 262 (417)
..+.+|..+|++.|.+...|. .+..+++|+.|+++.+...+...... .-..++.++++.+.... -..+..+
T Consensus 219 d~l~NL~dvDlS~N~Lp~vPe----cly~l~~LrrLNLS~N~iteL~~~~~----~W~~lEtLNlSrNQLt~-LP~avcK 289 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLPIVPE----CLYKLRNLRRLNLSGNKITELNMTEG----EWENLETLNLSRNQLTV-LPDAVCK 289 (1255)
T ss_pred hhhhhhhhccccccCCCcchH----HHhhhhhhheeccCcCceeeeeccHH----HHhhhhhhccccchhcc-chHHHhh
Confidence 567788889999999888887 66788999999988877554433222 22345555555554432 2344566
Q ss_pred HHHhhHHhhhccCCCchhhhhhccChhhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q psy13376 263 SEEKSKAFVENLEGDFLFNVQFENDVEGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLRQNEVDE 342 (417)
Q Consensus 263 ~~~l~~~~l~~l~~~~l~~~~~~~~~~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~~l~~~~ 342 (417)
+.+++..+..+.. --|+++.++- -++..+.... ...|.++-+|.+ .+.|.+|+.|.|+.|++.++++..
T Consensus 290 L~kL~kLy~n~Nk--L~FeGiPSGI------GKL~~Levf~--aanN~LElVPEg-lcRC~kL~kL~L~~NrLiTLPeaI 358 (1255)
T KOG0444|consen 290 LTKLTKLYANNNK--LTFEGIPSGI------GKLIQLEVFH--AANNKLELVPEG-LCRCVKLQKLKLDHNRLITLPEAI 358 (1255)
T ss_pred hHHHHHHHhccCc--ccccCCccch------hhhhhhHHHH--hhccccccCchh-hhhhHHHHHhcccccceeechhhh
Confidence 7777777776642 1155553332 2222332222 345667777755 788999999999999999988764
No 5
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.64 E-value=2.1e-16 Score=168.01 Aligned_cols=132 Identities=18% Similarity=0.178 Sum_probs=59.8
Q ss_pred cccccCCcchhhhhcccccEEEeecCCCCCCCCcCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccCCcc
Q psy13376 58 LLQESTNLAEKLQIYKLIKAVNLRIKTLRKIENLWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQGLDT 137 (417)
Q Consensus 58 l~~~~n~i~~l~~ll~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~~~~ 137 (417)
|.+++|+|+.++...++|+.|++++|.++.++.+ +++|+.|++++|+++.+|.. +++|+.|++++|+++.+|.+.
T Consensus 247 LdLs~N~LtsLP~lp~sL~~L~Ls~N~L~~Lp~l--p~~L~~L~Ls~N~Lt~LP~~--p~~L~~LdLS~N~L~~Lp~lp- 321 (788)
T PRK15387 247 LEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPAL--PSGLCKLWIFGNQLTSLPVL--PPGLQELSVSDNQLASLPALP- 321 (788)
T ss_pred EEecCCccCcccCcccccceeeccCCchhhhhhc--hhhcCEEECcCCcccccccc--ccccceeECCCCccccCCCCc-
Confidence 3444555554444444555555555555544431 13444555555555544431 244555555555555444321
Q ss_pred ccccceeEeecCCCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCC
Q psy13376 138 LVNLKVLNLKMNRIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKE 202 (417)
Q Consensus 138 l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 202 (417)
.+|+.|++++|.|+.+|.+ ..+|++|++++|+|+.+|.. .++|+.|++++|.+..+|
T Consensus 322 -~~L~~L~Ls~N~L~~LP~l--p~~Lq~LdLS~N~Ls~LP~l-----p~~L~~L~Ls~N~L~~LP 378 (788)
T PRK15387 322 -SELCKLWAYNNQLTSLPTL--PSGLQELSVSDNQLASLPTL-----PSELYKLWAYNNRLTSLP 378 (788)
T ss_pred -ccccccccccCcccccccc--ccccceEecCCCccCCCCCC-----CcccceehhhccccccCc
Confidence 2344444555554444422 12445555555555444331 133444444444444443
No 6
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.60 E-value=3.7e-17 Score=182.30 Aligned_cols=148 Identities=24% Similarity=0.294 Sum_probs=67.0
Q ss_pred cccccEEEeecCCCC-CCCC--cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCC-cccC-CccccccceeEe
Q psy13376 72 YKLIKAVNLRIKTLR-KIEN--LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIE-QIQG-LDTLVNLKVLNL 146 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~-~i~~--l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~-~l~~-~~~l~~L~~L~L 146 (417)
+++|+.|++++|.++ .+|. +..+++|++|++++|.++...+.+.+++|++|++++|.++ .+|. +..+++|++|++
T Consensus 92 l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 171 (968)
T PLN00113 92 LPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDL 171 (968)
T ss_pred CCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEEC
Confidence 555555555555554 2333 3355555555555555543222234445555555555544 2332 444555555555
Q ss_pred ecCCCCC-cC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCccc
Q psy13376 147 KMNRIET-IE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHII 223 (417)
Q Consensus 147 s~N~i~~-l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~ 223 (417)
++|.+.. +| .+.++++|++|++++|.+....+ ..+..+++|+.|++++|.+....+ ..++.+++|+.|+++.+
T Consensus 172 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p---~~l~~l~~L~~L~L~~n 246 (968)
T PLN00113 172 GGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIP-RELGQMKSLKWIYLGYNNLSGEIP---YEIGGLTSLNHLDLVYN 246 (968)
T ss_pred ccCcccccCChhhhhCcCCCeeeccCCCCcCcCC-hHHcCcCCccEEECcCCccCCcCC---hhHhcCCCCCEEECcCc
Confidence 5554432 22 24444555555555554443211 233444444444444444443211 12344444444444433
No 7
>KOG4237|consensus
Probab=99.60 E-value=1.6e-17 Score=158.75 Aligned_cols=279 Identities=19% Similarity=0.174 Sum_probs=190.3
Q ss_pred ccccCCcchhhhh-cccccEEEeecCCCCCCCC--cCCCcccceEeeeCCCCCCcCC--CCCCccCceeeeeC-CCCCcc
Q psy13376 59 LQESTNLAEKLQI-YKLIKAVNLRIKTLRKIEN--LWMMENLVELDLSMNHIGVIEN--LDQLVCLEKLDLGY-NRIEQI 132 (417)
Q Consensus 59 ~~~~n~i~~l~~l-l~~L~~L~Ls~N~i~~i~~--l~~l~~L~~L~Ls~N~l~~l~~--l~~l~~L~~L~Ls~-N~l~~l 132 (417)
+-+.-.++.++.- .+..+.++|..|+|+.+|+ |..+++|+.||||+|.|+.|.+ |.++.+|..|-+.+ |+|+++
T Consensus 52 dCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l 131 (498)
T KOG4237|consen 52 DCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDL 131 (498)
T ss_pred EccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhh
Confidence 3344445555544 6778899999999999987 9999999999999999999963 99999888887765 999999
Q ss_pred cC--CccccccceeEeecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHH-
Q psy13376 133 QG--LDTLVNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGF- 207 (417)
Q Consensus 133 ~~--~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~- 207 (417)
|. |.++..|+.|.+.-|++..+. .|..+++|..|.+-+|.+..+.. ..+..+..++++.+..|++.........
T Consensus 132 ~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~-~tf~~l~~i~tlhlA~np~icdCnL~wla 210 (498)
T KOG4237|consen 132 PKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICK-GTFQGLAAIKTLHLAQNPFICDCNLPWLA 210 (498)
T ss_pred hhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhcc-ccccchhccchHhhhcCccccccccchhh
Confidence 96 999999999999999999885 68999999999999999999877 5778899999999999997665432110
Q ss_pred -HHhcCCCcccccCcccCHHHHHHH-------HHHHhhhhhHHHHHhHHHH-HHHHHHHHHHHHHHHhhHHhhhccCCCc
Q psy13376 208 -AIAMVPQLQCYNNHIILEDERRTA-------LEQHMYDVRTETLKDLMVQ-RERQNALASQRKSEEKSKAFVENLEGDF 278 (417)
Q Consensus 208 -~~~~l~~L~~Ld~~~~~~~~~~~~-------~~~~~~~l~~L~~l~~~~~-~~~~~~~~~~~~~~~l~~~~l~~l~~~~ 278 (417)
.....+ .....-.|...-+... ...|......+........ ....-....+..+..++...+.+...+.
T Consensus 211 ~~~a~~~--ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 211 DDLAMNP--IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hHHhhch--hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 000000 0011111111000000 0111111111111111111 1111223446666777777777776666
Q ss_pred hhhhhhccChhhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q psy13376 279 LFNVQFENDVEGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLRQNEVDEFQAVYRALK 351 (417)
Q Consensus 279 l~~~~~~~~~~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~~l~~~~F~~~~~~~~ 351 (417)
+-++.|.+..+..+|. +..|-|+.+..++|.++++|++|+|.+|+|+.+.+++|+......+
T Consensus 289 i~~~aFe~~a~l~eL~-----------L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~ 350 (498)
T KOG4237|consen 289 IEDGAFEGAAELQELY-----------LTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLST 350 (498)
T ss_pred hhhhhhcchhhhhhhh-----------cCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeee
Confidence 6667776665555665 3467788888888888888888888888888888888887664433
No 8
>KOG0472|consensus
Probab=99.60 E-value=5.3e-17 Score=155.49 Aligned_cols=140 Identities=28% Similarity=0.345 Sum_probs=119.2
Q ss_pred ccccCCcchhhhh---cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccC
Q psy13376 59 LQESTNLAEKLQI---YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQG 134 (417)
Q Consensus 59 ~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~ 134 (417)
...+|++..+++- ++.|++++...|-++.+|+ ++.+.+|..|+|..|+|..+|.|.++..|++|+++.|.|+.+|.
T Consensus 166 ~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpa 245 (565)
T KOG0472|consen 166 DLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPA 245 (565)
T ss_pred hccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHH
Confidence 4677777777654 8888899999999988876 88899999999999999999999999999999999999998885
Q ss_pred --CccccccceeEeecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCC
Q psy13376 135 --LDTLVNLKVLNLKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDK 201 (417)
Q Consensus 135 --~~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~ 201 (417)
..+++++..|||.+|+++++| .+.-+.+|++||+|+|.|+.+|. .++++ .|+.|-+.|||+..+
T Consensus 246 e~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~--sLgnl-hL~~L~leGNPlrTi 312 (565)
T KOG0472|consen 246 EHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPY--SLGNL-HLKFLALEGNPLRTI 312 (565)
T ss_pred HHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCc--ccccc-eeeehhhcCCchHHH
Confidence 778889999999999999987 57778889999999999999876 56777 888999999998653
No 9
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.60 E-value=4.7e-17 Score=181.48 Aligned_cols=163 Identities=23% Similarity=0.241 Sum_probs=86.3
Q ss_pred cccccCCcchhhhh--cccccEEEeecCCCCC-CCC-cCCCcccceEeeeCCCCC-CcCC-CCCCccCceeeeeCCCCC-
Q psy13376 58 LLQESTNLAEKLQI--YKLIKAVNLRIKTLRK-IEN-LWMMENLVELDLSMNHIG-VIEN-LDQLVCLEKLDLGYNRIE- 130 (417)
Q Consensus 58 l~~~~n~i~~l~~l--l~~L~~L~Ls~N~i~~-i~~-l~~l~~L~~L~Ls~N~l~-~l~~-l~~l~~L~~L~Ls~N~l~- 130 (417)
++++.|++....+. +++|++|++++|.++. ++. ++.+++|++|++++|.+. .+|. +.++++|++|++++|.+.
T Consensus 123 L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 202 (968)
T PLN00113 123 LNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG 202 (968)
T ss_pred EECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcC
Confidence 34555555432222 5666666666666653 232 556666666666666654 3332 556666666666666654
Q ss_pred cccC-CccccccceeEeecCCCCC-cC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHH
Q psy13376 131 QIQG-LDTLVNLKVLNLKMNRIET-IE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGF 207 (417)
Q Consensus 131 ~l~~-~~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 207 (417)
.+|. +..+++|++|++++|.++. +| .+..+++|++|++++|.++...+ ..+..+++|+.|++++|.+....+ .
T Consensus 203 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p---~ 278 (968)
T PLN00113 203 QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIP-SSLGNLKNLQYLFLYQNKLSGPIP---P 278 (968)
T ss_pred cCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccC-hhHhCCCCCCEEECcCCeeeccCc---h
Confidence 2332 5556666666666666553 23 35556666666666665553222 244555666666666665543222 1
Q ss_pred HHhcCCCcccccCcccC
Q psy13376 208 AIAMVPQLQCYNNHIIL 224 (417)
Q Consensus 208 ~~~~l~~L~~Ld~~~~~ 224 (417)
.+..+++|+.|+++.+.
T Consensus 279 ~l~~l~~L~~L~Ls~n~ 295 (968)
T PLN00113 279 SIFSLQKLISLDLSDNS 295 (968)
T ss_pred hHhhccCcCEEECcCCe
Confidence 33445555555555443
No 10
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.59 E-value=3.1e-15 Score=159.18 Aligned_cols=203 Identities=17% Similarity=0.177 Sum_probs=98.4
Q ss_pred cccccccceeeccccccCCCCchhhhHHHHHhcCCCCCChhhhhccccccccccccccccCCcchhhhhcccccEEEeec
Q psy13376 3 IPTTVDRIKKIGLIKDRAGDESTLKNLAQVLQNAPAIINEDLLSKKGVISENLLSLLQESTNLAEKLQIYKLIKAVNLRI 82 (417)
Q Consensus 3 ip~~~~~l~~l~l~~n~l~dl~~L~~l~~L~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~n~i~~l~~ll~~L~~L~Ls~ 82 (417)
+|...++++.++++.|.++.++.+. ..|..+. +..+.+..++........|.+..|++..++..+++|+.|++++
T Consensus 237 LP~lp~~Lk~LdLs~N~LtsLP~lp--~sL~~L~---Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~LP~~p~~L~~LdLS~ 311 (788)
T PRK15387 237 LPALPPELRTLEVSGNQLTSLPVLP--PGLLELS---IFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSD 311 (788)
T ss_pred CCCCCCCCcEEEecCCccCcccCcc--cccceee---ccCCchhhhhhchhhcCEEECcCCccccccccccccceeECCC
Confidence 3444556666666666666665321 1222222 1222222221112222234455566665554456666666666
Q ss_pred CCCCCCCCcCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccCCc------------------ccccccee
Q psy13376 83 KTLRKIENLWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQGLD------------------TLVNLKVL 144 (417)
Q Consensus 83 N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~~~------------------~l~~L~~L 144 (417)
|+++.++.+ ..+|+.|++++|.++.+|.+ ..+|+.|+|++|+|+.+|.+. ...+|+.|
T Consensus 312 N~L~~Lp~l--p~~L~~L~Ls~N~L~~LP~l--p~~Lq~LdLS~N~Ls~LP~lp~~L~~L~Ls~N~L~~LP~l~~~L~~L 387 (788)
T PRK15387 312 NQLASLPAL--PSELCKLWAYNNQLTSLPTL--PSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKEL 387 (788)
T ss_pred CccccCCCC--cccccccccccCcccccccc--ccccceEecCCCccCCCCCCCcccceehhhccccccCcccccccceE
Confidence 666665431 11233333333333333321 124444555555544444211 01245555
Q ss_pred EeecCCCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccC
Q psy13376 145 NLKMNRIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIIL 224 (417)
Q Consensus 145 ~Ls~N~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~ 224 (417)
++++|.|+.+|.. .++|+.|++++|.++.+|.. ..+|+.|++++|.++.+|. .+..+++|+.++++.+.
T Consensus 388 dLs~N~Lt~LP~l--~s~L~~LdLS~N~LssIP~l-----~~~L~~L~Ls~NqLt~LP~----sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 388 IVSGNRLTSLPVL--PSELKELMVSGNRLTSLPML-----PSGLLSLSVYRNQLTRLPE----SLIHLSSETTVNLEGNP 456 (788)
T ss_pred EecCCcccCCCCc--ccCCCEEEccCCcCCCCCcc-----hhhhhhhhhccCcccccCh----HHhhccCCCeEECCCCC
Confidence 5555555555432 24566666666666655431 2345566666666666654 35566777777766655
Q ss_pred H
Q psy13376 225 E 225 (417)
Q Consensus 225 ~ 225 (417)
.
T Consensus 457 L 457 (788)
T PRK15387 457 L 457 (788)
T ss_pred C
Confidence 3
No 11
>KOG0472|consensus
Probab=99.58 E-value=3.9e-17 Score=156.34 Aligned_cols=160 Identities=19% Similarity=0.251 Sum_probs=132.4
Q ss_pred ccccCCcchhhhh---cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCccc
Q psy13376 59 LQESTNLAEKLQI---YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 59 ~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~ 133 (417)
...+|+|..+++- +.++..+++.+|+++..++ .-.++.|++||...|-++.+|. ++++.+|..|+|..|+|..+|
T Consensus 143 ~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~~lP 222 (565)
T KOG0472|consen 143 DATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIRFLP 222 (565)
T ss_pred hccccccccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccccCC
Confidence 4666777777655 6778888888888888865 4448889999999999998875 899999999999999999999
Q ss_pred CCccccccceeEeecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhc
Q psy13376 134 GLDTLVNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAM 211 (417)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 211 (417)
.|.++..|.+|+++.|.|+.+| ...+++++.+||+++|+++++|. .+..+++|..||+++|.|+..|. .+++
T Consensus 223 ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pd--e~clLrsL~rLDlSNN~is~Lp~----sLgn 296 (565)
T KOG0472|consen 223 EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPD--EICLLRSLERLDLSNNDISSLPY----SLGN 296 (565)
T ss_pred CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCch--HHHHhhhhhhhcccCCccccCCc----cccc
Confidence 9999999999999999998887 36789999999999999999886 45678889999999999999886 5666
Q ss_pred CCCcccccCcccCH
Q psy13376 212 VPQLQCYNNHIILE 225 (417)
Q Consensus 212 l~~L~~Ld~~~~~~ 225 (417)
+ .|+.|-+...+.
T Consensus 297 l-hL~~L~leGNPl 309 (565)
T KOG0472|consen 297 L-HLKFLALEGNPL 309 (565)
T ss_pred c-eeeehhhcCCch
Confidence 6 777776655553
No 12
>KOG1259|consensus
Probab=99.57 E-value=1.8e-16 Score=146.84 Aligned_cols=154 Identities=25% Similarity=0.332 Sum_probs=136.5
Q ss_pred cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccC-CccccccceeEeecC
Q psy13376 72 YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMN 149 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N 149 (417)
+..|+.++||+|.|+.++. ..-.|.++.|++|+|.|..+.++..+++|+.||||+|.++.+.+ -..+-+.+.|.|+.|
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhh
Confidence 5679999999999999976 77889999999999999999999999999999999999999987 446778999999999
Q ss_pred CCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCC---CcccccCcccCH
Q psy13376 150 RIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVP---QLQCYNNHIILE 225 (417)
Q Consensus 150 ~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~---~L~~Ld~~~~~~ 225 (417)
.|.+++++..+.+|..||+++|+|..+..+..++++|.|+++.|.+||+..+++|+..++..+. +=-.||...-..
T Consensus 363 ~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdYRTKVLa~FGERaSE~~LD~~~~~~ 441 (490)
T KOG1259|consen 363 KIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDYRTKVLARFGERASEISLDNEPGNQ 441 (490)
T ss_pred hHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchHHHHHHHHHhhhhhheecCCCCcch
Confidence 9999999999999999999999999999988999999999999999999999999988776553 222455554443
No 13
>KOG0444|consensus
Probab=99.57 E-value=2e-16 Score=158.57 Aligned_cols=255 Identities=19% Similarity=0.192 Sum_probs=169.5
Q ss_pred cccCCcchhhhh---cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCC--CcCC-CCCCccCceeeeeCCCCCcc
Q psy13376 60 QESTNLAEKLQI---YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIG--VIEN-LDQLVCLEKLDLGYNRIEQI 132 (417)
Q Consensus 60 ~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~--~l~~-l~~l~~L~~L~Ls~N~l~~l 132 (417)
++..++..++.- +.+|++|.+++|++.++-+ ++.+|.|+.+++..|++. .+|. +-.+..|+.||||+|+++++
T Consensus 39 Lnrt~L~~vPeEL~~lqkLEHLs~~HN~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~Ev 118 (1255)
T KOG0444|consen 39 LNRTKLEQVPEELSRLQKLEHLSMAHNQLISVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREV 118 (1255)
T ss_pred echhhhhhChHHHHHHhhhhhhhhhhhhhHhhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhc
Confidence 333444444433 8899999999999998855 999999999999999987 4664 78899999999999999999
Q ss_pred cC-CccccccceeEeecCCCCCcCC--CCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHH
Q psy13376 133 QG-LDTLVNLKVLNLKMNRIETIEG--LDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAI 209 (417)
Q Consensus 133 ~~-~~~l~~L~~L~Ls~N~i~~l~~--l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 209 (417)
|. +....++-.|+||+|+|.++|. |.+++.|-+||||+|++..+|+ .++.+..|++|.|++||+... -+
T Consensus 119 P~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPP--Q~RRL~~LqtL~Ls~NPL~hf------QL 190 (1255)
T KOG0444|consen 119 PTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPP--QIRRLSMLQTLKLSNNPLNHF------QL 190 (1255)
T ss_pred chhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCH--HHHHHhhhhhhhcCCChhhHH------HH
Confidence 95 8888899999999999999984 7889999999999999999987 468899999999999998653 34
Q ss_pred hcCCCcccccCcccCHHHHHHH-HHHHhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhhHHhhhccCCCchhhhhhccCh
Q psy13376 210 AMVPQLQCYNNHIILEDERRTA-LEQHMYDVRTETLKDLMVQRERQNALASQRKSEEKSKAFVENLEGDFLFNVQFENDV 288 (417)
Q Consensus 210 ~~l~~L~~Ld~~~~~~~~~~~~-~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~l~~~~~~~~~ 288 (417)
..+|+++.|..-..+...+... -.-...++.+|...+.+.+..+. ..++...+..++..+++......+--..-
T Consensus 191 rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPecly~l~~LrrLNLS~N~iteL~~~~~---- 265 (1255)
T KOG0444|consen 191 RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPECLYKLRNLRRLNLSGNKITELNMTEG---- 265 (1255)
T ss_pred hcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc-chHHHhhhhhhheeccCcCceeeeeccHH----
Confidence 5666666655444433222111 01123445555555555555442 22333344444444444433222210000
Q ss_pred hhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy13376 289 EGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLR 336 (417)
Q Consensus 289 ~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~ 336 (417)
+.. +++.+. ...|.+..+| .+...+++|+.|.+.+|++.
T Consensus 266 ~W~------~lEtLN--lSrNQLt~LP-~avcKL~kL~kLy~n~NkL~ 304 (1255)
T KOG0444|consen 266 EWE------NLETLN--LSRNQLTVLP-DAVCKLTKLTKLYANNNKLT 304 (1255)
T ss_pred HHh------hhhhhc--cccchhccch-HHHhhhHHHHHHHhccCccc
Confidence 000 001111 2244455555 45666777777777777654
No 14
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.55 E-value=2.3e-15 Score=133.23 Aligned_cols=139 Identities=30% Similarity=0.387 Sum_probs=59.2
Q ss_pred cccCCcchhhhh--cccccEEEeecCCCCCCCCcC-CCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccC-C
Q psy13376 60 QESTNLAEKLQI--YKLIKAVNLRIKTLRKIENLW-MMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQG-L 135 (417)
Q Consensus 60 ~~~n~i~~l~~l--l~~L~~L~Ls~N~i~~i~~l~-~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~-~ 135 (417)
+..+.|..+... ..++++|+|.+|.|+.++.++ .+.+|+.|++++|.|+.++++..++.|++|++++|+|++++. +
T Consensus 4 lt~~~i~~~~~~~n~~~~~~L~L~~n~I~~Ie~L~~~l~~L~~L~Ls~N~I~~l~~l~~L~~L~~L~L~~N~I~~i~~~l 83 (175)
T PF14580_consen 4 LTANMIEQIAQYNNPVKLRELNLRGNQISTIENLGATLDKLEVLDLSNNQITKLEGLPGLPRLKTLDLSNNRISSISEGL 83 (175)
T ss_dssp --------------------------------S--TT-TT--EEE-TTS--S--TT----TT--EEE--SS---S-CHHH
T ss_pred ccccccccccccccccccccccccccccccccchhhhhcCCCEEECCCCCCccccCccChhhhhhcccCCCCCCccccch
Confidence 444556666665 667899999999999999987 689999999999999999999999999999999999999964 4
Q ss_pred -ccccccceeEeecCCCCCcC---CCCCCCCCcEEeccCCccCcchhh--hhhhCCCCcCEEeccCCCCCC
Q psy13376 136 -DTLVNLKVLNLKMNRIETIE---GLDHLEKLELFNIAANRIQSLASL--VYLRRFKHLGRLNIERNPVCD 200 (417)
Q Consensus 136 -~~l~~L~~L~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~i~~l~~~--~~l~~l~~L~~L~L~~N~l~~ 200 (417)
..+|+|++|++++|+|..+. .+..+++|++|++.+|.++..+.. ..+..+|+|+.||- .+++.
T Consensus 84 ~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~--~~V~~ 152 (175)
T PF14580_consen 84 DKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG--QDVTE 152 (175)
T ss_dssp HHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT--EETTS
T ss_pred HHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC--EEccH
Confidence 46899999999999998875 467899999999999999876542 24678999999984 44444
No 15
>KOG0617|consensus
Probab=99.53 E-value=5.6e-16 Score=133.12 Aligned_cols=143 Identities=21% Similarity=0.345 Sum_probs=113.6
Q ss_pred ccccCCcchhhhh---cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcC-CCCCCccCceeeeeCCCCC--c
Q psy13376 59 LQESTNLAEKLQI---YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIE-NLDQLVCLEKLDLGYNRIE--Q 131 (417)
Q Consensus 59 ~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~--~ 131 (417)
-++.|+++.+++- +.+|++|++++|+|+.+|. ++.+++|+.|+++-|++..+| +|+.++.|+.|||++|++. .
T Consensus 39 tLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldltynnl~e~~ 118 (264)
T KOG0617|consen 39 TLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLTYNNLNENS 118 (264)
T ss_pred hcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhcccccccccc
Confidence 3667777777654 7888888888888888876 888888888888888888777 4888888888888888886 5
Q ss_pred ccC-CccccccceeEeecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 132 IQG-LDTLVNLKVLNLKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 132 l~~-~~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
+|+ |..+..|+.|+|++|.+.-+| .++.+++|+.|.+.+|.+-++|. .++.+..|+.|.+.+|+++-+|+
T Consensus 119 lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpk--eig~lt~lrelhiqgnrl~vlpp 190 (264)
T KOG0617|consen 119 LPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPK--EIGDLTRLRELHIQGNRLTVLPP 190 (264)
T ss_pred CCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcH--HHHHHHHHHHHhcccceeeecCh
Confidence 665 777888888888888888776 57888888888888888877765 45777888888888888887776
No 16
>KOG4237|consensus
Probab=99.50 E-value=3.8e-15 Score=142.63 Aligned_cols=137 Identities=26% Similarity=0.291 Sum_probs=112.8
Q ss_pred EEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC--CCCCccCceeeeeCCCCCcccC--CccccccceeEeec-CC
Q psy13376 77 AVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN--LDQLVCLEKLDLGYNRIEQIQG--LDTLVNLKVLNLKM-NR 150 (417)
Q Consensus 77 ~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~--l~~l~~L~~L~Ls~N~l~~l~~--~~~l~~L~~L~Ls~-N~ 150 (417)
..+-++-+++.+|. +. +.-..++|..|+|+.+|+ |+.+++|+.||||+|+|+.|.+ |.++++|..|-+.+ |+
T Consensus 50 ~VdCr~~GL~eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred eEEccCCCcccCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 34556666777764 32 467889999999999985 9999999999999999999975 99999987777766 99
Q ss_pred CCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCccccc
Q psy13376 151 IETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYN 219 (417)
Q Consensus 151 i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld 219 (417)
|+.++ .|+++..|+.|.+.-|++..+.. ..|..+++|..|.+.+|.+..++. ..+..+..++.+.
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~-~al~dL~~l~lLslyDn~~q~i~~---~tf~~l~~i~tlh 194 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQ-DALRDLPSLSLLSLYDNKIQSICK---GTFQGLAAIKTLH 194 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhH-HHHHHhhhcchhcccchhhhhhcc---ccccchhccchHh
Confidence 99997 59999999999999999999877 688999999999999999988775 2344455555443
No 17
>KOG0618|consensus
Probab=99.49 E-value=6.7e-16 Score=160.98 Aligned_cols=309 Identities=14% Similarity=0.112 Sum_probs=160.6
Q ss_pred eccccccCCCCchhhhHHHHHhcCCCCCChhhhhccccccccccccccccCCcchhhhh--cccccEEEeecCCCCCCCC
Q psy13376 13 IGLIKDRAGDESTLKNLAQVLQNAPAIINEDLLSKKGVISENLLSLLQESTNLAEKLQI--YKLIKAVNLRIKTLRKIEN 90 (417)
Q Consensus 13 l~l~~n~l~dl~~L~~l~~L~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~n~i~~l~~l--l~~L~~L~Ls~N~i~~i~~ 90 (417)
+++..|.++ ...+.++.++..+. ...+.+..+.+.......+..+.|.+..+... ..+++.+++++|+++.+|.
T Consensus 183 ldLr~N~~~-~~dls~~~~l~~l~---c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~ 258 (1081)
T KOG0618|consen 183 LDLRYNEME-VLDLSNLANLEVLH---CERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPE 258 (1081)
T ss_pred eecccchhh-hhhhhhccchhhhh---hhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcchH
Confidence 777777777 44555554444444 44444444433333333445566666644333 5667777777777777765
Q ss_pred -cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccC-CccccccceeEeecCCCCCcCC--CCCCC-CCc
Q psy13376 91 -LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMNRIETIEG--LDHLE-KLE 164 (417)
Q Consensus 91 -l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N~i~~l~~--l~~l~-~L~ 164 (417)
+..+.+|+.++..+|.++.++. +...++|+.|.+.+|.++.+|. ..++..|++|+|..|+|..+|. +.... .|+
T Consensus 259 wi~~~~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~ 338 (1081)
T KOG0618|consen 259 WIGACANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLN 338 (1081)
T ss_pred HHHhcccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHH
Confidence 5666777777777777766653 5566666777777777776665 4446667777777777666652 22222 244
Q ss_pred EEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCHHHHHHHHHHHhhhhhHHHH
Q psy13376 165 LFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILEDERRTALEQHMYDVRTETL 244 (417)
Q Consensus 165 ~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~~~~l~~L~~ 244 (417)
.|+.+.|.+...+.... ..++.|+.|++.+|.+++..- .++..+++|+.|+++++.. ....+.....+..|++
T Consensus 339 ~ln~s~n~l~~lp~~~e-~~~~~Lq~LylanN~Ltd~c~---p~l~~~~hLKVLhLsyNrL---~~fpas~~~kle~Lee 411 (1081)
T KOG0618|consen 339 TLNVSSNKLSTLPSYEE-NNHAALQELYLANNHLTDSCF---PVLVNFKHLKVLHLSYNRL---NSFPASKLRKLEELEE 411 (1081)
T ss_pred HHhhhhccccccccccc-hhhHHHHHHHHhcCcccccch---hhhccccceeeeeeccccc---ccCCHHHHhchHHhHH
Confidence 44444444444433211 233445556666666655332 2455666666666666642 2233445556666666
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHhhhccCCCchhhhhhccChhhhhhhhhccCCccccccHHHHHHHHHHHHHHHHHH
Q psy13376 245 KDLMVQRERQNALASQRKSEEKSKAFVENLEGDFLFNVQFENDVEGQEMLKLCTIPTKLGRSVAELYNNFKRDFLEVSSK 324 (417)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~l~~~~~~~~~~~~~l~~l~~l~~l~~~~~~~li~~~~~~~f~~~~~ 324 (417)
+++++|...... .+......++....-......+.+-+ . ...++ . +. ...|-++++.-..-..-++
T Consensus 412 L~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fPe~~-~----l~qL~---~---lD--lS~N~L~~~~l~~~~p~p~ 477 (1081)
T KOG0618|consen 412 LNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFPELA-Q----LPQLK---V---LD--LSCNNLSEVTLPEALPSPN 477 (1081)
T ss_pred Hhcccchhhhhh-HHHHhhhhhHHHhhcCCceeechhhh-h----cCcce---E---Ee--cccchhhhhhhhhhCCCcc
Confidence 666666655444 33333333333333322211111100 0 00000 0 00 1122222222111222277
Q ss_pred HHHHHHHhhhhhHHHHHHHHHH
Q psy13376 325 LYEFGTSQHSLRQNEVDEFQAV 346 (417)
Q Consensus 325 L~~L~Ls~N~l~~l~~~~F~~~ 346 (417)
|++|||++|.-...+..+|..+
T Consensus 478 LkyLdlSGN~~l~~d~~~l~~l 499 (1081)
T KOG0618|consen 478 LKYLDLSGNTRLVFDHKTLKVL 499 (1081)
T ss_pred cceeeccCCcccccchhhhHHh
Confidence 8888888888666666666554
No 18
>KOG0617|consensus
Probab=99.46 E-value=1.9e-15 Score=129.90 Aligned_cols=154 Identities=19% Similarity=0.276 Sum_probs=133.9
Q ss_pred cchhhhh--cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccC-Ccccc
Q psy13376 65 LAEKLQI--YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQG-LDTLV 139 (417)
Q Consensus 65 i~~l~~l--l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~-~~~l~ 139 (417)
..++.++ +++++.|.+|+|+++.+++ +..+.+|+.|++++|+|+++|. ++.+++|+.|+++.|++..+|. |+.+|
T Consensus 23 f~~~~gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p 102 (264)
T KOG0617|consen 23 FEELPGLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFP 102 (264)
T ss_pred HhhcccccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCc
Confidence 3444555 8889999999999999976 9999999999999999999985 9999999999999999999984 99999
Q ss_pred ccceeEeecCCCCC--cC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcc
Q psy13376 140 NLKVLNLKMNRIET--IE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQ 216 (417)
Q Consensus 140 ~L~~L~Ls~N~i~~--l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 216 (417)
.|+.|+|.+|++.. +| .|-.+..|+.|++++|.+.-+|. .++++++|+.|.+.+|.+-+.|. .++.+..|+
T Consensus 103 ~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~--dvg~lt~lqil~lrdndll~lpk----eig~lt~lr 176 (264)
T KOG0617|consen 103 ALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPP--DVGKLTNLQILSLRDNDLLSLPK----EIGDLTRLR 176 (264)
T ss_pred hhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCCh--hhhhhcceeEEeeccCchhhCcH----HHHHHHHHH
Confidence 99999999999975 45 57788999999999999998886 56899999999999999998886 667778888
Q ss_pred cccCcccC
Q psy13376 217 CYNNHIIL 224 (417)
Q Consensus 217 ~Ld~~~~~ 224 (417)
.|......
T Consensus 177 elhiqgnr 184 (264)
T KOG0617|consen 177 ELHIQGNR 184 (264)
T ss_pred HHhcccce
Confidence 77665543
No 19
>KOG3207|consensus
Probab=99.45 E-value=2.3e-14 Score=138.93 Aligned_cols=217 Identities=24% Similarity=0.262 Sum_probs=166.0
Q ss_pred ccccceeeccccccCCCCchhhhH-HHHHhcCCCCCChhhhhccccccccccccccccCCcchh-hhhcccccEEEeecC
Q psy13376 6 TVDRIKKIGLIKDRAGDESTLKNL-AQVLQNAPAIINEDLLSKKGVISENLLSLLQESTNLAEK-LQIYKLIKAVNLRIK 83 (417)
Q Consensus 6 ~~~~l~~l~l~~n~l~dl~~L~~l-~~L~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~n~i~~l-~~ll~~L~~L~Ls~N 83 (417)
.+++++.+|+++|-+.++.++-++ .+|..+..-.++.+.+... +.+. ...+++|+.|.++.|
T Consensus 144 ~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~----------------~~s~~~~~l~~lK~L~l~~C 207 (505)
T KOG3207|consen 144 ILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNF----------------ISSNTTLLLSHLKQLVLNSC 207 (505)
T ss_pred hCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCC----------------ccccchhhhhhhheEEeccC
Confidence 467888999999999988876654 2222222111222222211 1111 112899999999999
Q ss_pred CCCCCC--C-cCCCcccceEeeeCCCCCCcC--CCCCCccCceeeeeCCCCCcccC---CccccccceeEeecCCCCCcC
Q psy13376 84 TLRKIE--N-LWMMENLVELDLSMNHIGVIE--NLDQLVCLEKLDLGYNRIEQIQG---LDTLVNLKVLNLKMNRIETIE 155 (417)
Q Consensus 84 ~i~~i~--~-l~~l~~L~~L~Ls~N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l~~---~~~l~~L~~L~Ls~N~i~~l~ 155 (417)
+++.-+ . +..+|+|+.|+|.+|..-.+. ...-+..|++|||++|++-+++. ...+|.|+.|+++.+.|+++.
T Consensus 208 Gls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~ 287 (505)
T KOG3207|consen 208 GLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIA 287 (505)
T ss_pred CCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhc
Confidence 998422 1 668899999999999533222 35677899999999999987773 788999999999999999873
Q ss_pred --C------CCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCcc-HHHHhcCCCcccccCcccCHH
Q psy13376 156 --G------LDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVD-GFAIAMVPQLQCYNNHIILED 226 (417)
Q Consensus 156 --~------l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~-~~~~~~l~~L~~Ld~~~~~~~ 226 (417)
+ ...+++|++|+++.|+|.+|+.+..+..+++|++|.+..|++....... ..+++.++++..|+...|.+.
T Consensus 288 ~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e~~~a~~~VIAr~~~l~~LN~~di~p~ 367 (505)
T KOG3207|consen 288 EPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKETDTAKLLVIARISQLVKLNDVDISPN 367 (505)
T ss_pred CCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccccccceeEEeeeehhhhhhhcccccChH
Confidence 2 2567899999999999999999888899999999999999998765422 237788999999999999999
Q ss_pred HHHHHHHHHhhh
Q psy13376 227 ERRTALEQHMYD 238 (417)
Q Consensus 227 ~~~~~~~~~~~~ 238 (417)
++..|+..|...
T Consensus 368 eRR~AEl~~~~~ 379 (505)
T KOG3207|consen 368 ERRDAELYYLSK 379 (505)
T ss_pred HhhhhhhhHHhh
Confidence 999999988766
No 20
>KOG1644|consensus
Probab=99.41 E-value=2.1e-13 Score=120.13 Aligned_cols=140 Identities=31% Similarity=0.372 Sum_probs=122.7
Q ss_pred ccceEeeeCCCCCCcCCCCC-CccCceeeeeCCCCCcccCCccccccceeEeecCCCCCcC-CC-CCCCCCcEEeccCCc
Q psy13376 96 NLVELDLSMNHIGVIENLDQ-LVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETIE-GL-DHLEKLELFNIAANR 172 (417)
Q Consensus 96 ~L~~L~Ls~N~l~~l~~l~~-l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l~-~l-~~l~~L~~L~Ls~N~ 172 (417)
.=++++|.+.++..+..++. +.+...+||++|.+..++.|..++.|.+|.|++|+|+.+. .+ .-+++|..|.+.+|.
T Consensus 20 ~e~e~~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNs 99 (233)
T KOG1644|consen 20 RERELDLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNS 99 (233)
T ss_pred cccccccccccccchhhccccccccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcc
Confidence 35567777777776665443 3477889999999999999999999999999999999985 34 345789999999999
Q ss_pred cCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCHHHHHHHHHHH
Q psy13376 173 IQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILEDERRTALEQH 235 (417)
Q Consensus 173 i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~ 235 (417)
|..+..+..+..+|+|++|.+-+||++....|+.+++..+|+|+.||...++..++..|+.++
T Consensus 100 i~~l~dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~kVt~~ER~~A~~~f 162 (233)
T KOG1644|consen 100 IQELGDLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQKVTRKEREEAEVFF 162 (233)
T ss_pred hhhhhhcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhhhhHHHHHHHHHHh
Confidence 999988888999999999999999999999999999999999999999999999999999888
No 21
>KOG0618|consensus
Probab=99.40 E-value=5.9e-14 Score=146.65 Aligned_cols=310 Identities=17% Similarity=0.190 Sum_probs=149.6
Q ss_pred cccceeeccccccCCCCch-hhhHHHHHhcCCCCCChhhhhccccccccccccccccCCcchhhhh-ccccc-EEEeecC
Q psy13376 7 VDRIKKIGLIKDRAGDEST-LKNLAQVLQNAPAIINEDLLSKKGVISENLLSLLQESTNLAEKLQI-YKLIK-AVNLRIK 83 (417)
Q Consensus 7 ~~~l~~l~l~~n~l~dl~~-L~~l~~L~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~n~i~~l~~l-l~~L~-~L~Ls~N 83 (417)
++++..+|++.|.+..++. +..+.........-- ..+..++... ...+.+..|.+..--.. ...++ .|+|++|
T Consensus 113 lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N--~~~~~lg~~~--ik~~~l~~n~l~~~~~~~i~~l~~~ldLr~N 188 (1081)
T KOG0618|consen 113 LKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNN--EKIQRLGQTS--IKKLDLRLNVLGGSFLIDIYNLTHQLDLRYN 188 (1081)
T ss_pred hhcccccccchhccCCCchhHHhhhHHHHHhhhcc--hhhhhhcccc--chhhhhhhhhcccchhcchhhhheeeecccc
Confidence 4567778888888888875 344433333321100 1111121111 11122333333222111 22233 4777777
Q ss_pred CCCCCCCcCCCcccceEeeeCCCCCCcCC--------------------CCCCccCceeeeeCCCCCcccC-Cccccccc
Q psy13376 84 TLRKIENLWMMENLVELDLSMNHIGVIEN--------------------LDQLVCLEKLDLGYNRIEQIQG-LDTLVNLK 142 (417)
Q Consensus 84 ~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~--------------------l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~ 142 (417)
.+. .-.+..+++|+.+....|++..+.. -....+|+++++++|+++.+|. +..+++|+
T Consensus 189 ~~~-~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~~lp~wi~~~~nle 267 (1081)
T KOG0618|consen 189 EME-VLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLSNLPEWIGACANLE 267 (1081)
T ss_pred hhh-hhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccccccccceeeecchhhhhcchHHHHhcccce
Confidence 777 4445555566666666665554421 1112244444444444444444 44444444
Q ss_pred eeEeecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCC-cccccC
Q psy13376 143 VLNLKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQ-LQCYNN 220 (417)
Q Consensus 143 ~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~-L~~Ld~ 220 (417)
.++..+|.++.++ .+...++|+.|.+.+|.+..++. ....+++|++|+|..|.+...|+ ..+..... |..++.
T Consensus 268 ~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~--~le~~~sL~tLdL~~N~L~~lp~---~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 268 ALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPP--FLEGLKSLRTLDLQSNNLPSLPD---NFLAVLNASLNTLNV 342 (1081)
T ss_pred EecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCC--cccccceeeeeeehhccccccch---HHHhhhhHHHHHHhh
Confidence 4444444444443 23344444444444554444443 23345555555555555555544 11111111 222322
Q ss_pred cccCHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHHHHHHhhHHhhhccCCCchhhhhhccChhhhhhhhhccCC
Q psy13376 221 HIILEDERRTALEQHMYDVRTETLKDLMVQRERQNALASQRKSEEKSKAFVENLEGDFLFNVQFENDVEGQEMLKLCTIP 300 (417)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~l~~~~l~~~~~~~~~~~~~l~~l~~l~ 300 (417)
+. +....-..-.......+...++.+.. +-+.+|-....+..|+
T Consensus 343 s~---------------------------n~l~~lp~~~e~~~~~Lq~LylanN~---Ltd~c~p~l~~~~hLK------ 386 (1081)
T KOG0618|consen 343 SS---------------------------NKLSTLPSYEENNHAALQELYLANNH---LTDSCFPVLVNFKHLK------ 386 (1081)
T ss_pred hh---------------------------ccccccccccchhhHHHHHHHHhcCc---ccccchhhhcccccee------
Confidence 22 22111110001112222333333321 1222222222222222
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhHHHHHHhhHHh
Q psy13376 301 TKLGRSVAELYNNFKRDFLEVSSKLYEFGTSQHSLRQNEVDEFQAVYRALKLKSCHEAVKNKTRY 365 (417)
Q Consensus 301 ~l~~~~~~~li~~~~~~~f~~~~~L~~L~Ls~N~l~~l~~~~F~~~~~~~~~~~~~~~~~~~~~~ 365 (417)
.+. ..-|.+.+||+..+..++.|++|+||+|+++.+. ++-..+.+.-+...+-+.+.-+.++
T Consensus 387 VLh--LsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp-~tva~~~~L~tL~ahsN~l~~fPe~ 448 (1081)
T KOG0618|consen 387 VLH--LSYNRLNSFPASKLRKLEELEELNLSGNKLTTLP-DTVANLGRLHTLRAHSNQLLSFPEL 448 (1081)
T ss_pred eee--ecccccccCCHHHHhchHHhHHHhcccchhhhhh-HHHHhhhhhHHHhhcCCceeechhh
Confidence 222 4567799999999999999999999999999999 7777777777666665544444443
No 22
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.39 E-value=2e-13 Score=145.96 Aligned_cols=182 Identities=15% Similarity=0.182 Sum_probs=92.2
Q ss_pred ccceeeccccccCCCCchhhhHHHHHhcCCCCCChhhhhccc-cccccccccccccCCcchhhhh-cccccEEEeecCCC
Q psy13376 8 DRIKKIGLIKDRAGDESTLKNLAQVLQNAPAIINEDLLSKKG-VISENLLSLLQESTNLAEKLQI-YKLIKAVNLRIKTL 85 (417)
Q Consensus 8 ~~l~~l~l~~n~l~dl~~L~~l~~L~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~n~i~~l~~l-l~~L~~L~Ls~N~i 85 (417)
.+++.+++..|.++.++.-. ..+|..+. +..+.+..++ .+......+.++.|++..++.. .++|+.|++++|++
T Consensus 199 ~~L~~L~Ls~N~LtsLP~~l-~~nL~~L~---Ls~N~LtsLP~~l~~~L~~L~Ls~N~L~~LP~~l~s~L~~L~Ls~N~L 274 (754)
T PRK15370 199 EQITTLILDNNELKSLPENL-QGNIKTLY---ANSNQLTSIPATLPDTIQEMELSINRITELPERLPSALQSLDLFHNKI 274 (754)
T ss_pred cCCcEEEecCCCCCcCChhh-ccCCCEEE---CCCCccccCChhhhccccEEECcCCccCcCChhHhCCCCEEECcCCcc
Confidence 35677777777777665311 11222221 1112222210 0111122344555655555443 45566666666666
Q ss_pred CCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccCCccccccceeEeecCCCCCcCCCCCCCCC
Q psy13376 86 RKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETIEGLDHLEKL 163 (417)
Q Consensus 86 ~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~L 163 (417)
+.+|. +. ++|+.|++++|+++.+|. + .++|+.|++++|.++.+|.. ..++|+.|++++|.++.+|.. -.++|
T Consensus 275 ~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~l--p~sL~~L~Ls~N~Lt~LP~~-l~~sL~~L~Ls~N~Lt~LP~~-l~~sL 348 (754)
T PRK15370 275 SCLPENLP--EELRYLSVYDNSIRTLPAHL--PSGITHLNVQSNSLTALPET-LPPGLKTLEAGENALTSLPAS-LPPEL 348 (754)
T ss_pred CccccccC--CCCcEEECCCCccccCcccc--hhhHHHHHhcCCccccCCcc-ccccceeccccCCccccCChh-hcCcc
Confidence 65544 22 356666666666665543 2 13455555666655555431 114566666666666655521 12466
Q ss_pred cEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 164 ELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 164 ~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
+.|++++|+|+.+|. .+ .++|+.|++++|+++.+|.
T Consensus 349 ~~L~Ls~N~L~~LP~--~l--p~~L~~LdLs~N~Lt~LP~ 384 (754)
T PRK15370 349 QVLDVSKNQITVLPE--TL--PPTITTLDVSRNALTNLPE 384 (754)
T ss_pred cEEECCCCCCCcCCh--hh--cCCcCEEECCCCcCCCCCH
Confidence 666666666665554 11 2456666666666666654
No 23
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.32 E-value=1.1e-12 Score=140.25 Aligned_cols=205 Identities=13% Similarity=0.109 Sum_probs=146.0
Q ss_pred ccceeeccccccCCCCchhhhHHHHHhcCCCCCChhhhhccc-cccccccccccccCCcchhhhh-cccccEEEeecCCC
Q psy13376 8 DRIKKIGLIKDRAGDESTLKNLAQVLQNAPAIINEDLLSKKG-VISENLLSLLQESTNLAEKLQI-YKLIKAVNLRIKTL 85 (417)
Q Consensus 8 ~~l~~l~l~~n~l~dl~~L~~l~~L~~~~~~~~~~~~l~~~~-~~~~~~~~l~~~~n~i~~l~~l-l~~L~~L~Ls~N~i 85 (417)
.+++.+++..|.++.++.- -...|..+. ++.+.+..++ .+......|.++.|++..++.- .++|+.|++++|++
T Consensus 220 ~nL~~L~Ls~N~LtsLP~~-l~~~L~~L~---Ls~N~L~~LP~~l~s~L~~L~Ls~N~L~~LP~~l~~sL~~L~Ls~N~L 295 (754)
T PRK15370 220 GNIKTLYANSNQLTSIPAT-LPDTIQEME---LSINRITELPERLPSALQSLDLFHNKISCLPENLPEELRYLSVYDNSI 295 (754)
T ss_pred cCCCEEECCCCccccCChh-hhccccEEE---CcCCccCcCChhHhCCCCEEECcCCccCccccccCCCCcEEECCCCcc
Confidence 5788999999999877641 011222222 2222222220 0112334567888999887765 67899999999999
Q ss_pred CCCCCcCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccC-CccccccceeEeecCCCCCcCCCCCCCCCc
Q psy13376 86 RKIENLWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMNRIETIEGLDHLEKLE 164 (417)
Q Consensus 86 ~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~ 164 (417)
+.++... .++|+.|++++|.++.+|.. -.++|+.|++++|.++.+|. +. ++|+.|++++|+|+.+|. .-.++|+
T Consensus 296 t~LP~~l-p~sL~~L~Ls~N~Lt~LP~~-l~~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~-~lp~~L~ 370 (754)
T PRK15370 296 RTLPAHL-PSGITHLNVQSNSLTALPET-LPPGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPE-TLPPTIT 370 (754)
T ss_pred ccCcccc-hhhHHHHHhcCCccccCCcc-ccccceeccccCCccccCChhhc--CcccEEECCCCCCCcCCh-hhcCCcC
Confidence 9887511 25799999999999988751 13689999999999998886 43 689999999999998874 1236899
Q ss_pred EEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCH
Q psy13376 165 LFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILE 225 (417)
Q Consensus 165 ~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~ 225 (417)
+|++++|.++.+|. .+. +.|+.|++++|++..+|..-......++++..+++..++.
T Consensus 371 ~LdLs~N~Lt~LP~--~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npl 427 (754)
T PRK15370 371 TLDVSRNALTNLPE--NLP--AALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPF 427 (754)
T ss_pred EEECCCCcCCCCCH--hHH--HHHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCc
Confidence 99999999998876 222 3688999999999988763333445567888877766653
No 24
>KOG1259|consensus
Probab=99.25 E-value=6.7e-13 Score=123.36 Aligned_cols=126 Identities=25% Similarity=0.313 Sum_probs=115.0
Q ss_pred ccccccccccCCcchhhhh---cccccEEEeecCCCCCCCCcCCCcccceEeeeCCCCCCcCCC-CCCccCceeeeeCCC
Q psy13376 53 ENLLSLLQESTNLAEKLQI---YKLIKAVNLRIKTLRKIENLWMMENLVELDLSMNHIGVIENL-DQLVCLEKLDLGYNR 128 (417)
Q Consensus 53 ~~~~~l~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l-~~l~~L~~L~Ls~N~ 128 (417)
+....+++++|.|+.++.- .+.++.|++|+|.|..+..+..+++|+.||||+|.++.+.++ .++.+++.|.|+.|.
T Consensus 284 q~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 284 QELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred hhhhhccccccchhhhhhhhhhccceeEEeccccceeeehhhhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhh
Confidence 3445678999999999765 899999999999999999999999999999999999999873 578899999999999
Q ss_pred CCcccCCccccccceeEeecCCCCCcC---CCCCCCCCcEEeccCCccCcchh
Q psy13376 129 IEQIQGLDTLVNLKVLNLKMNRIETIE---GLDHLEKLELFNIAANRIQSLAS 178 (417)
Q Consensus 129 l~~l~~~~~l~~L~~L~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~i~~l~~ 178 (417)
|.+++++..+.+|..||+++|+|..+. +++++|.|+++.|.+|.+..++.
T Consensus 364 iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 364 IETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred HhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 999999999999999999999999875 69999999999999999988765
No 25
>KOG1859|consensus
Probab=99.19 E-value=2.1e-13 Score=139.10 Aligned_cols=140 Identities=25% Similarity=0.395 Sum_probs=125.3
Q ss_pred cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccCCc--cccccceeEeec
Q psy13376 72 YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQGLD--TLVNLKVLNLKM 148 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~~~--~l~~L~~L~Ls~ 148 (417)
...|.+.+.++|.++.++. +.-++.|+.|+|++|+++.+..+..+++|++|||++|.++.+|.++ .+ +|..|++++
T Consensus 163 Wn~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrn 241 (1096)
T KOG1859|consen 163 WNKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRN 241 (1096)
T ss_pred hhhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhccccccchhhh-hheeeeecc
Confidence 5667888999999998865 8888999999999999999999999999999999999999999743 34 499999999
Q ss_pred CCCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcC
Q psy13376 149 NRIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMV 212 (417)
Q Consensus 149 N~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 212 (417)
|.++++.++.++.+|+.||+++|-|.+...+..+..+..|+.|+|.|||++.-|.|+......+
T Consensus 242 N~l~tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p~hRaataqYl 305 (1096)
T KOG1859|consen 242 NALTTLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAPWHRAATAQYL 305 (1096)
T ss_pred cHHHhhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCHHHHHHHHhHh
Confidence 9999999999999999999999999998888888899999999999999999988876655443
No 26
>KOG3207|consensus
Probab=99.12 E-value=5.7e-12 Score=122.49 Aligned_cols=189 Identities=19% Similarity=0.168 Sum_probs=130.9
Q ss_pred cccccEEEeecCCCCCCCC---cCCCcccceEeeeCCCCCCcC--C-CCCCccCceeeeeCCCCCccc--CCccccccce
Q psy13376 72 YKLIKAVNLRIKTLRKIEN---LWMMENLVELDLSMNHIGVIE--N-LDQLVCLEKLDLGYNRIEQIQ--GLDTLVNLKV 143 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~---l~~l~~L~~L~Ls~N~l~~l~--~-l~~l~~L~~L~Ls~N~l~~l~--~~~~l~~L~~ 143 (417)
+++|+.|+++.|.+....+ -..+++|+.|.++.|.+++-. . +..+|+|+.|+|..|..-.+. ....+..|+.
T Consensus 171 Lp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~ 250 (505)
T KOG3207|consen 171 LPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQE 250 (505)
T ss_pred cccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhh
Confidence 8889999999988876532 336778889999999888432 2 567889999999988532222 2455678999
Q ss_pred eEeecCCCCCcC---CCCCCCCCcEEeccCCccCcchhhhh-----hhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCc
Q psy13376 144 LNLKMNRIETIE---GLDHLEKLELFNIAANRIQSLASLVY-----LRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQL 215 (417)
Q Consensus 144 L~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~i~~l~~~~~-----l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 215 (417)
|+|++|++-+.+ ..+.++.|+.|+++.+.|.++..++. ...+++|++|++..|++.+++.. ..+..+++|
T Consensus 251 LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl--~~l~~l~nl 328 (505)
T KOG3207|consen 251 LDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSL--NHLRTLENL 328 (505)
T ss_pred ccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcccccccc--chhhccchh
Confidence 999999988775 47889999999999999988654332 35789999999999999888773 344556777
Q ss_pred cccc--CcccCHHHHHHHHHHHhhhhhHHHHHhHHHHHHHHHHHHHHHHH
Q psy13376 216 QCYN--NHIILEDERRTALEQHMYDVRTETLKDLMVQRERQNALASQRKS 263 (417)
Q Consensus 216 ~~Ld--~~~~~~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~~~~ 263 (417)
+.|. ++++..++ ..+.......+..+..++...-...++..++....
T Consensus 329 k~l~~~~n~ln~e~-~~a~~~VIAr~~~l~~LN~~di~p~eRR~AEl~~~ 377 (505)
T KOG3207|consen 329 KHLRITLNYLNKET-DTAKLLVIARISQLVKLNDVDISPNERRDAELYYL 377 (505)
T ss_pred hhhhcccccccccc-cceeEEeeeehhhhhhhcccccChHHhhhhhhhHH
Confidence 7665 44444322 24444455566666666544443444444444433
No 27
>KOG0531|consensus
Probab=99.12 E-value=9.6e-12 Score=126.00 Aligned_cols=119 Identities=38% Similarity=0.529 Sum_probs=79.0
Q ss_pred cccCCcchhhh-h--cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccCC
Q psy13376 60 QESTNLAEKLQ-I--YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQGL 135 (417)
Q Consensus 60 ~~~n~i~~l~~-l--l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~~ 135 (417)
+..|.|..+.. + +++++.+++..|.|..+.. +..+++|++|++++|.|+.+.++..++.|+.|++++|.|+.++++
T Consensus 79 l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N~i~~~~~~ 158 (414)
T KOG0531|consen 79 LRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGNLISDISGL 158 (414)
T ss_pred cchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccchhhccchhhheeccCcchhccCC
Confidence 34444554333 3 6667777777777777766 666777777777777777776666666677777777777777666
Q ss_pred ccccccceeEeecCCCCCcCC--CCCCCCCcEEeccCCccCcchh
Q psy13376 136 DTLVNLKVLNLKMNRIETIEG--LDHLEKLELFNIAANRIQSLAS 178 (417)
Q Consensus 136 ~~l~~L~~L~Ls~N~i~~l~~--l~~l~~L~~L~Ls~N~i~~l~~ 178 (417)
..++.|+.+++++|.++.++. ...+.+++.+++.+|.+..+..
T Consensus 159 ~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~~ 203 (414)
T KOG0531|consen 159 ESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIEG 203 (414)
T ss_pred ccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhcccc
Confidence 666777777777777766665 4666677777777776665544
No 28
>KOG2982|consensus
Probab=99.11 E-value=2.8e-11 Score=112.61 Aligned_cols=189 Identities=22% Similarity=0.251 Sum_probs=133.2
Q ss_pred cccccCCcchhhhh------cccccEEEeecCCCCCC-CCc-CCCcccceEeeeCCCCCCcC---CCCCCccCceeeeeC
Q psy13376 58 LLQESTNLAEKLQI------YKLIKAVNLRIKTLRKI-ENL-WMMENLVELDLSMNHIGVIE---NLDQLVCLEKLDLGY 126 (417)
Q Consensus 58 l~~~~n~i~~l~~l------l~~L~~L~Ls~N~i~~i-~~l-~~l~~L~~L~Ls~N~l~~l~---~l~~l~~L~~L~Ls~ 126 (417)
+++.+|.|.+.+.+ ++.|+.|+++.|.+... ..+ ....+|+.|-|.+..+..-. .+..+|.+++|.+|.
T Consensus 76 lDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~ 155 (418)
T KOG2982|consen 76 LDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSD 155 (418)
T ss_pred hhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhcc
Confidence 34555666555444 66677777777776542 223 34556777777666655332 255666666666666
Q ss_pred CCCCcc----------c--------------------C-CccccccceeEeecCCCCCcC---CCCCCCCCcEEeccCCc
Q psy13376 127 NRIEQI----------Q--------------------G-LDTLVNLKVLNLKMNRIETIE---GLDHLEKLELFNIAANR 172 (417)
Q Consensus 127 N~l~~l----------~--------------------~-~~~l~~L~~L~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~ 172 (417)
|.+..+ . . ..-+|++..+.+..|.+.+.. ++..++.+..|+|+.|+
T Consensus 156 N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~ 235 (418)
T KOG2982|consen 156 NSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANN 235 (418)
T ss_pred chhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccc
Confidence 633211 1 0 112477888888888887764 57778888899999999
Q ss_pred cCcchhhhhhhCCCCcCEEeccCCCCCCCC---CccHHHHhcCCCcccccCcccCHHHHHHHHHHHhhhhhHHHHHh
Q psy13376 173 IQSLASLVYLRRFKHLGRLNIERNPVCDKE---NVDGFAIAMVPQLQCYNNHIILEDERRTALEQHMYDVRTETLKD 246 (417)
Q Consensus 173 i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~---~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~~~~~~l~~L~~l~ 246 (417)
|.+|.++..+.+++.|..|.+++||+.+.- .-+...++++++++.|+++.++..++...+..|.+....-++..
T Consensus 236 idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGskIss~er~dSEr~fVRyym~qke~p 312 (418)
T KOG2982|consen 236 IDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGSKISSRERKDSERRFVRYYMSQKELP 312 (418)
T ss_pred cccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecCcccchhhhhhhHHHHHHHHhhhhhcc
Confidence 999999999999999999999999997632 12334778999999999999999999999999887666543333
No 29
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.08 E-value=3.6e-11 Score=116.82 Aligned_cols=29 Identities=10% Similarity=0.149 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q psy13376 319 LEVSSKLYEFGTSQHSLRQNEVDEFQAVY 347 (417)
Q Consensus 319 f~~~~~L~~L~Ls~N~l~~l~~~~F~~~~ 347 (417)
+..+++|+.+++++|.+..-+...+....
T Consensus 274 ~~~~~~L~~l~l~~N~l~~~~~~~~~~~~ 302 (319)
T cd00116 274 LAEKESLLELDLRGNKFGEEGAQLLAESL 302 (319)
T ss_pred HhcCCCccEEECCCCCCcHHHHHHHHHHH
Confidence 33446788888888888877766665544
No 30
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.04 E-value=9.3e-11 Score=113.97 Aligned_cols=184 Identities=24% Similarity=0.209 Sum_probs=107.1
Q ss_pred cccccEEEeecCCCCCCC--CcCCC---cccceEeeeCCCCCCcC------CCCCC-ccCceeeeeCCCCCc-----ccC
Q psy13376 72 YKLIKAVNLRIKTLRKIE--NLWMM---ENLVELDLSMNHIGVIE------NLDQL-VCLEKLDLGYNRIEQ-----IQG 134 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~--~l~~l---~~L~~L~Ls~N~l~~l~------~l~~l-~~L~~L~Ls~N~l~~-----l~~ 134 (417)
+++|+.|++++|.+.... .+..+ ++|++|++++|.++... .+..+ ++|+.|++++|.++. +..
T Consensus 80 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~ 159 (319)
T cd00116 80 GCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAK 159 (319)
T ss_pred cCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHH
Confidence 557888888888776422 13333 44888888888776311 24455 778888888888772 121
Q ss_pred -CccccccceeEeecCCCCCc------CCCCCCCCCcEEeccCCccCcchh---hhhhhCCCCcCEEeccCCCCCCCCCc
Q psy13376 135 -LDTLVNLKVLNLKMNRIETI------EGLDHLEKLELFNIAANRIQSLAS---LVYLRRFKHLGRLNIERNPVCDKENV 204 (417)
Q Consensus 135 -~~~l~~L~~L~Ls~N~i~~l------~~l~~l~~L~~L~Ls~N~i~~l~~---~~~l~~l~~L~~L~L~~N~l~~~~~~ 204 (417)
+..+++|++|++++|.++.- ..+..+++|++|++++|.+++... ...+..+++|++|++++|++++....
T Consensus 160 ~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~ 239 (319)
T cd00116 160 ALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAA 239 (319)
T ss_pred HHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHH
Confidence 55566788888888877631 124455678888888887765332 12345677788888888877753221
Q ss_pred cH--HHHhcCCCcccccCcccCHHHH-HHHHHHHhhhhhHHHHHhHHHHHHHHH
Q psy13376 205 DG--FAIAMVPQLQCYNNHIILEDER-RTALEQHMYDVRTETLKDLMVQRERQN 255 (417)
Q Consensus 205 ~~--~~~~~l~~L~~Ld~~~~~~~~~-~~~~~~~~~~l~~L~~l~~~~~~~~~~ 255 (417)
.. ......+.|+.|++..+..... ...-..+......|+.++...+....+
T Consensus 240 ~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 240 ALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 00 0111236778777776654211 111122333335555556555555433
No 31
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.04 E-value=7.7e-11 Score=118.53 Aligned_cols=161 Identities=24% Similarity=0.354 Sum_probs=107.9
Q ss_pred ccccccCCcchhhhh---cc-cccEEEeecCCCCCCC-CcCCCcccceEeeeCCCCCCcCCCC-CCccCceeeeeCCCCC
Q psy13376 57 SLLQESTNLAEKLQI---YK-LIKAVNLRIKTLRKIE-NLWMMENLVELDLSMNHIGVIENLD-QLVCLEKLDLGYNRIE 130 (417)
Q Consensus 57 ~l~~~~n~i~~l~~l---l~-~L~~L~Ls~N~i~~i~-~l~~l~~L~~L~Ls~N~l~~l~~l~-~l~~L~~L~Ls~N~l~ 130 (417)
.+.+..|.+.+++.. ++ +|+.|++++|.+..++ ++..+++|+.|++++|++++++... .++.|+.|++++|+++
T Consensus 120 ~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ls~N~i~ 199 (394)
T COG4886 120 SLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDLSGNKIS 199 (394)
T ss_pred EEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhhhhhhhhhhhhhhhheeccCCccc
Confidence 345666666666665 32 6777777777777773 5677777777777777777776543 6677777777777777
Q ss_pred cccCC-ccccccceeEeecCC-CCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHH
Q psy13376 131 QIQGL-DTLVNLKVLNLKMNR-IETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFA 208 (417)
Q Consensus 131 ~l~~~-~~l~~L~~L~Ls~N~-i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 208 (417)
.+|.. .....|++|.+++|. +..+..+..+.++..+.+.+|++..++. .+..+++++.|++++|.++.++.
T Consensus 200 ~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~--~~~~l~~l~~L~~s~n~i~~i~~----- 272 (394)
T COG4886 200 DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPE--SIGNLSNLETLDLSNNQISSISS----- 272 (394)
T ss_pred cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccc--hhccccccceecccccccccccc-----
Confidence 77763 344457777777773 3334456667777777777777666432 44667778888888888887764
Q ss_pred HhcCCCcccccCcccC
Q psy13376 209 IAMVPQLQCYNNHIIL 224 (417)
Q Consensus 209 ~~~l~~L~~Ld~~~~~ 224 (417)
++.+.+++.|+.+...
T Consensus 273 ~~~~~~l~~L~~s~n~ 288 (394)
T COG4886 273 LGSLTNLRELDLSGNS 288 (394)
T ss_pred ccccCccCEEeccCcc
Confidence 4567777777776654
No 32
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.02 E-value=1.7e-10 Score=115.96 Aligned_cols=146 Identities=29% Similarity=0.432 Sum_probs=126.4
Q ss_pred ccccccccCCcchh-hhh--cccccEEEeecCCCCCCCCcC-CCcccceEeeeCCCCCCcCCC-CCCccCceeeeeCCCC
Q psy13376 55 LLSLLQESTNLAEK-LQI--YKLIKAVNLRIKTLRKIENLW-MMENLVELDLSMNHIGVIENL-DQLVCLEKLDLGYNRI 129 (417)
Q Consensus 55 ~~~l~~~~n~i~~l-~~l--l~~L~~L~Ls~N~i~~i~~l~-~l~~L~~L~Ls~N~l~~l~~l-~~l~~L~~L~Ls~N~l 129 (417)
...+.++.|++..+ .++ +++|+.|++++|+++.++... ..++|+.|++++|+++.+|.. ..+..|++|++++|.+
T Consensus 142 L~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~ 221 (394)
T COG4886 142 LKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSI 221 (394)
T ss_pred cccccccccchhhhhhhhhccccccccccCCchhhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcc
Confidence 34567888999998 355 999999999999999998855 899999999999999999975 5666799999999954
Q ss_pred -CcccCCccccccceeEeecCCCCCc-CCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 130 -EQIQGLDTLVNLKVLNLKMNRIETI-EGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 130 -~~l~~~~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
..+..+..+.++..+.+++|++..+ ..++.+++++.|++++|.+++++. +..+.+++.+++++|.+...+.
T Consensus 222 ~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~---~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 222 IELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS---LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred eecchhhhhcccccccccCCceeeeccchhccccccceecccccccccccc---ccccCccCEEeccCccccccch
Confidence 4555588899999999999999884 468888999999999999999876 5788999999999999988765
No 33
>KOG0531|consensus
Probab=98.99 E-value=7.2e-11 Score=119.63 Aligned_cols=131 Identities=39% Similarity=0.540 Sum_probs=86.8
Q ss_pred cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccCCccccccceeEeecC
Q psy13376 72 YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMN 149 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N 149 (417)
+..++.+.+..|.|..+.. +..+++|+.|++.+|.|..+.. +..+++|++|++++|.|+.+.++..++.|+.|++++|
T Consensus 71 l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~~l~~l~~L~~L~l~~N 150 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLEGLSTLTLLKELNLSGN 150 (414)
T ss_pred hHhHHhhccchhhhhhhhcccccccceeeeeccccchhhcccchhhhhcchheeccccccccccchhhccchhhheeccC
Confidence 4455555566666666433 6666677777777777777666 6667777777777777777766666666777777777
Q ss_pred CCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 150 RIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 150 ~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
.|+.++.+..++.|+.+++++|.++.++... ...+.+++.+++.+|.+..+..
T Consensus 151 ~i~~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~ 203 (414)
T KOG0531|consen 151 LISDISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREIEG 203 (414)
T ss_pred cchhccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcccc
Confidence 7777766666777777777777766665411 3556666777777776666554
No 34
>KOG2123|consensus
Probab=98.98 E-value=5.1e-11 Score=109.90 Aligned_cols=119 Identities=27% Similarity=0.421 Sum_probs=105.7
Q ss_pred CCccCceeeeeCCCCCcccCCccccccceeEeecCCCCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEecc
Q psy13376 115 QLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIE 194 (417)
Q Consensus 115 ~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~ 194 (417)
.+.+.+.|++-++.+.+|.-...++.|+.|.||-|+|+++..+..|++|+.|+|..|.|.++..+.++.++|+|+.|+|.
T Consensus 17 dl~~vkKLNcwg~~L~DIsic~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDISICEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HHHHhhhhcccCCCccHHHHHHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 35567778888888888877788899999999999999998899999999999999999999999999999999999999
Q ss_pred CCCCCCC--CCccHHHHhcCCCcccccCcccCHHHHHHHHH
Q psy13376 195 RNPVCDK--ENVDGFAIAMVPQLQCYNNHIILEDERRTALE 233 (417)
Q Consensus 195 ~N~l~~~--~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~~~ 233 (417)
.||.+.- +.|+..++..+|+|+.||...+..++.+.|-.
T Consensus 97 ENPCc~~ag~nYR~~VLR~LPnLkKLDnv~VteeEle~ALr 137 (388)
T KOG2123|consen 97 ENPCCGEAGQNYRRKVLRVLPNLKKLDNVPVTEEELEEALR 137 (388)
T ss_pred cCCcccccchhHHHHHHHHcccchhccCccccHHHHHHHHh
Confidence 9998764 56888999999999999999999888776644
No 35
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.94 E-value=2.8e-09 Score=120.92 Aligned_cols=145 Identities=17% Similarity=0.195 Sum_probs=96.4
Q ss_pred cccccEEEeecCCCCCCCCcCCC-------------------------------cccceEeeeCCC-CCCcCC-CCCCcc
Q psy13376 72 YKLIKAVNLRIKTLRKIENLWMM-------------------------------ENLVELDLSMNH-IGVIEN-LDQLVC 118 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~l~~l-------------------------------~~L~~L~Ls~N~-l~~l~~-l~~l~~ 118 (417)
.++|+.|++++|.++.+|....+ ++|+.|++++|. +..+|. ++++++
T Consensus 724 ~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~ 803 (1153)
T PLN03210 724 STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHK 803 (1153)
T ss_pred cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCC
Confidence 56677777777777666542222 456666666663 445553 677777
Q ss_pred CceeeeeCC-CCCcccCCccccccceeEeecCC-CCCcCCCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccC-
Q psy13376 119 LEKLDLGYN-RIEQIQGLDTLVNLKVLNLKMNR-IETIEGLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIER- 195 (417)
Q Consensus 119 L~~L~Ls~N-~l~~l~~~~~l~~L~~L~Ls~N~-i~~l~~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~- 195 (417)
|+.|++++| .++.+|....+++|+.|++++|. +..+|.+ .++|+.|++++|.|+.+|. .+..+++|+.|++++
T Consensus 804 L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~L~~~p~~--~~nL~~L~Ls~n~i~~iP~--si~~l~~L~~L~L~~C 879 (1153)
T PLN03210 804 LEHLEIENCINLETLPTGINLESLESLDLSGCSRLRTFPDI--STNISDLNLSRTGIEEVPW--WIEKFSNLSFLDMNGC 879 (1153)
T ss_pred CCEEECCCCCCcCeeCCCCCccccCEEECCCCCcccccccc--ccccCEeECCCCCCccChH--HHhcCCCCCEEECCCC
Confidence 888887775 46667654467777778877753 3444432 3578888888888888775 567888888888887
Q ss_pred CCCCCCCCccHHHHhcCCCcccccCcccC
Q psy13376 196 NPVCDKENVDGFAIAMVPQLQCYNNHIIL 224 (417)
Q Consensus 196 N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~ 224 (417)
+.+..++. ....+++|+.++.+.|.
T Consensus 880 ~~L~~l~~----~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 880 NNLQRVSL----NISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCcCccCc----ccccccCCCeeecCCCc
Confidence 45666654 34566777777777665
No 36
>KOG0532|consensus
Probab=98.87 E-value=1.2e-10 Score=116.67 Aligned_cols=159 Identities=21% Similarity=0.302 Sum_probs=117.9
Q ss_pred cccCCcchhhhh---cccccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccC
Q psy13376 60 QESTNLAEKLQI---YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQG 134 (417)
Q Consensus 60 ~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~ 134 (417)
+..|.|..+..- +..|+.++++.|+++.++. ++.++ |+.|-+++|+++.+|. ++.+..|..||.+.|.+.++|.
T Consensus 105 Ly~n~~r~ip~~i~~L~~lt~l~ls~NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slps 183 (722)
T KOG0532|consen 105 LYHNCIRTIPEAICNLEALTFLDLSSNQLSHLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPS 183 (722)
T ss_pred HHhccceecchhhhhhhHHHHhhhccchhhcCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchH
Confidence 444555555433 7777888888888888765 66554 7888888888888874 7777788888888888888876
Q ss_pred -CccccccceeEeecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcC
Q psy13376 135 -LDTLVNLKVLNLKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMV 212 (417)
Q Consensus 135 -~~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l 212 (417)
+..+.+|+.|++..|.+..+| .+..+ .|..||++.|+|..+|. .|++++.|++|-|.+||+..-|. .....+..
T Consensus 184 ql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis~iPv--~fr~m~~Lq~l~LenNPLqSPPA-qIC~kGkV 259 (722)
T KOG0532|consen 184 QLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKISYLPV--DFRKMRHLQVLQLENNPLQSPPA-QICEKGKV 259 (722)
T ss_pred HhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCceeecch--hhhhhhhheeeeeccCCCCCChH-HHHhccce
Confidence 788888888888888888876 35544 58889999999999886 67899999999999999988665 12233344
Q ss_pred CCcccccCccc
Q psy13376 213 PQLQCYNNHII 223 (417)
Q Consensus 213 ~~L~~Ld~~~~ 223 (417)
.=.++|+..-|
T Consensus 260 HIFKyL~~qA~ 270 (722)
T KOG0532|consen 260 HIFKYLSTQAC 270 (722)
T ss_pred eeeeeecchhc
Confidence 44566666655
No 37
>KOG0532|consensus
Probab=98.87 E-value=2.5e-10 Score=114.35 Aligned_cols=100 Identities=24% Similarity=0.417 Sum_probs=48.5
Q ss_pred ccEEEeecCCCCCCCC-cCCCcccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCcccC-CccccccceeEeecCCC
Q psy13376 75 IKAVNLRIKTLRKIEN-LWMMENLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMNRI 151 (417)
Q Consensus 75 L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N~i 151 (417)
|+.|-+++|+++.+|. ++..+.|..||.+.|.+..++. ++++.+|+.|.+..|++..+|. +..+ .|..||+|.|+|
T Consensus 145 Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 145 LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCce
Confidence 4455555555554443 4444445555555555554443 4445555555555555544443 3322 244455555555
Q ss_pred CCcC-CCCCCCCCcEEeccCCccCc
Q psy13376 152 ETIE-GLDHLEKLELFNIAANRIQS 175 (417)
Q Consensus 152 ~~l~-~l~~l~~L~~L~Ls~N~i~~ 175 (417)
+.+| .|..|+.|++|-|.+|.+++
T Consensus 224 s~iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 224 SYLPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred eecchhhhhhhhheeeeeccCCCCC
Confidence 5554 34455555555555555544
No 38
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.82 E-value=1.9e-08 Score=114.16 Aligned_cols=157 Identities=15% Similarity=0.157 Sum_probs=102.9
Q ss_pred cccccCCcchhhhh--cccccEEEeecCCCCCCCC-cCCCcccceEeeeCC-CCCCcCCCCCCccCceeeeeCCC-CCcc
Q psy13376 58 LLQESTNLAEKLQI--YKLIKAVNLRIKTLRKIEN-LWMMENLVELDLSMN-HIGVIENLDQLVCLEKLDLGYNR-IEQI 132 (417)
Q Consensus 58 l~~~~n~i~~l~~l--l~~L~~L~Ls~N~i~~i~~-l~~l~~L~~L~Ls~N-~l~~l~~l~~l~~L~~L~Ls~N~-l~~l 132 (417)
+....+.+..++.. +.+|+.|++++|.+..++. +..+++|+.|+|+++ .++.+|.+..+++|+.|++++|. +..+
T Consensus 594 L~~~~~~l~~lP~~f~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~l 673 (1153)
T PLN03210 594 LRWDKYPLRCMPSNFRPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVEL 673 (1153)
T ss_pred EEecCCCCCCCCCcCCccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCcccc
Confidence 34455555555544 6677777777777777643 667777777777765 36666777777777777777754 5566
Q ss_pred cC-CccccccceeEeecC-CCCCcCCCCCCCCCcEEeccCCc-cCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHH
Q psy13376 133 QG-LDTLVNLKVLNLKMN-RIETIEGLDHLEKLELFNIAANR-IQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAI 209 (417)
Q Consensus 133 ~~-~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~L~~L~Ls~N~-i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~ 209 (417)
|. +..+++|+.|++++| .++.+|...++++|++|++++|. +..+|. ..++|+.|++++|.+..+|..
T Consensus 674 p~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~Lsgc~~L~~~p~-----~~~nL~~L~L~~n~i~~lP~~----- 743 (1153)
T PLN03210 674 PSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLNLSGCSRLKSFPD-----ISTNISWLDLDETAIEEFPSN----- 743 (1153)
T ss_pred chhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEeCCCCCCcccccc-----ccCCcCeeecCCCcccccccc-----
Confidence 64 677777777777764 56666644467777778777773 333332 235778888888888777651
Q ss_pred hcCCCcccccCcccC
Q psy13376 210 AMVPQLQCYNNHIIL 224 (417)
Q Consensus 210 ~~l~~L~~Ld~~~~~ 224 (417)
..+++|+.|++..+.
T Consensus 744 ~~l~~L~~L~l~~~~ 758 (1153)
T PLN03210 744 LRLENLDELILCEMK 758 (1153)
T ss_pred ccccccccccccccc
Confidence 145666666665543
No 39
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=6.1e-09 Score=75.89 Aligned_cols=54 Identities=31% Similarity=0.565 Sum_probs=23.4
Q ss_pred CceeeeeCCCCCcccC--CccccccceeEeecCCCCCcC--CCCCCCCCcEEeccCCc
Q psy13376 119 LEKLDLGYNRIEQIQG--LDTLVNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANR 172 (417)
Q Consensus 119 L~~L~Ls~N~l~~l~~--~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~ 172 (417)
|++|++++|+++.++. |..+++|++|++++|.++.++ .|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4444444444444442 444444444444444444442 24444444444444443
No 40
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.72 E-value=1.1e-08 Score=74.47 Aligned_cols=59 Identities=24% Similarity=0.436 Sum_probs=54.5
Q ss_pred cccceeEeecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCC
Q psy13376 139 VNLKVLNLKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPV 198 (417)
Q Consensus 139 ~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l 198 (417)
|+|++|++++|+|+.++ .|.++++|++|++++|.++.+++ ..|..+++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~-~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPP-DAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEET-TTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCH-HHHcCCCCCCEEeCcCCcC
Confidence 57999999999999997 58999999999999999999987 6789999999999999985
No 41
>KOG2739|consensus
Probab=98.66 E-value=8.7e-09 Score=94.79 Aligned_cols=119 Identities=22% Similarity=0.300 Sum_probs=98.4
Q ss_pred CCCCccCceeeeeCCCCCcccCCccccccceeEeecCCCCCc---C-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCc
Q psy13376 113 LDQLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETI---E-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHL 188 (417)
Q Consensus 113 l~~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l---~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L 188 (417)
...+..|+.|++.+..++++..|..+++|++|.++.|..... + ....+++|++|++++|+|..+..+..++.+++|
T Consensus 39 ~d~~~~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL 118 (260)
T KOG2739|consen 39 TDEFVELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENL 118 (260)
T ss_pred cccccchhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcch
Confidence 345567777788888888888888889999999999954432 2 245569999999999999987777777889999
Q ss_pred CEEeccCCCCCCCCCccHHHHhcCCCcccccCcccCHHHHHHH
Q psy13376 189 GRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIILEDERRTA 231 (417)
Q Consensus 189 ~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~~~~~~ 231 (417)
..|++..|+.+....|+..++..+|+|++||...+...+...+
T Consensus 119 ~~Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~~dv~~~Ea~~~ 161 (260)
T KOG2739|consen 119 KSLDLFNCSVTNLDDYREKVFLLLPSLKYLDGCDVDGEEAPEA 161 (260)
T ss_pred hhhhcccCCccccccHHHHHHHHhhhhccccccccCCcccccc
Confidence 9999999999999999999999999999999999886655443
No 42
>KOG1644|consensus
Probab=98.62 E-value=4.5e-08 Score=86.81 Aligned_cols=112 Identities=26% Similarity=0.276 Sum_probs=64.5
Q ss_pred ccccCCcchhhhh---cccccEEEeecCCCCCCCCcCCCcccceEeeeCCCCCCcCC-C-CCCccCceeeeeCCCCCccc
Q psy13376 59 LQESTNLAEKLQI---YKLIKAVNLRIKTLRKIENLWMMENLVELDLSMNHIGVIEN-L-DQLVCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 59 ~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~-l-~~l~~L~~L~Ls~N~l~~l~ 133 (417)
.+...+++.++.+ ......++|++|.+..++.|..++.|.+|.+++|+|+.|.+ + ..+++|+.|.|.+|.|..+.
T Consensus 25 ~LR~lkip~ienlg~~~d~~d~iDLtdNdl~~l~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~LtnNsi~~l~ 104 (233)
T KOG1644|consen 25 DLRGLKIPVIENLGATLDQFDAIDLTDNDLRKLDNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTNNSIQELG 104 (233)
T ss_pred ccccccccchhhccccccccceecccccchhhcccCCCccccceEEecCCcceeeccchhhhccccceEEecCcchhhhh
Confidence 3444455555444 55556666666666666666666666666666666666643 2 23455666666666665443
Q ss_pred ---CCccccccceeEeecCCCCCcCC-----CCCCCCCcEEeccC
Q psy13376 134 ---GLDTLVNLKVLNLKMNRIETIEG-----LDHLEKLELFNIAA 170 (417)
Q Consensus 134 ---~~~~l~~L~~L~Ls~N~i~~l~~-----l~~l~~L~~L~Ls~ 170 (417)
++..+|.|++|.+-+|.++.-.. +..+|+|+.||.++
T Consensus 105 dl~pLa~~p~L~~Ltll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 105 DLDPLASCPKLEYLTLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred hcchhccCCccceeeecCCchhcccCceeEEEEecCcceEeehhh
Confidence 35556666666666666655432 45556666666544
No 43
>KOG1859|consensus
Probab=98.61 E-value=9.3e-10 Score=112.99 Aligned_cols=119 Identities=23% Similarity=0.280 Sum_probs=104.3
Q ss_pred ccccccCCcchhhhh---cccccEEEeecCCCCCCCCcCCCcccceEeeeCCCCCCcCCCC--CCccCceeeeeCCCCCc
Q psy13376 57 SLLQESTNLAEKLQI---YKLIKAVNLRIKTLRKIENLWMMENLVELDLSMNHIGVIENLD--QLVCLEKLDLGYNRIEQ 131 (417)
Q Consensus 57 ~l~~~~n~i~~l~~l---l~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~--~l~~L~~L~Ls~N~l~~ 131 (417)
+...++|.+..++.- ++.++.|+|++|+++++..+..+++|+.|||++|.++.+|.++ ++ .|+.|.+++|.+++
T Consensus 168 ~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrnN~l~t 246 (1096)
T KOG1859|consen 168 TASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRNNALTT 246 (1096)
T ss_pred hhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhccccccchhhh-hheeeeecccHHHh
Confidence 445777888877654 8999999999999999999999999999999999999999754 33 49999999999999
Q ss_pred ccCCccccccceeEeecCCCCCcC---CCCCCCCCcEEeccCCccCcc
Q psy13376 132 IQGLDTLVNLKVLNLKMNRIETIE---GLDHLEKLELFNIAANRIQSL 176 (417)
Q Consensus 132 l~~~~~l~~L~~L~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~i~~l 176 (417)
+-++.++.+|+.||+++|-|.... .+..+..|+.|+|.+|.+-.-
T Consensus 247 L~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 247 LRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 999999999999999999988764 567788999999999998653
No 44
>KOG1909|consensus
Probab=98.51 E-value=8.3e-08 Score=91.51 Aligned_cols=181 Identities=19% Similarity=0.157 Sum_probs=127.7
Q ss_pred cccccEEEeecCCCCC--CCC----cCCCcccceEeeeCCCCCCcCC---------------CCCCccCceeeeeCCCCC
Q psy13376 72 YKLIKAVNLRIKTLRK--IEN----LWMMENLVELDLSMNHIGVIEN---------------LDQLVCLEKLDLGYNRIE 130 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~--i~~----l~~l~~L~~L~Ls~N~l~~l~~---------------l~~l~~L~~L~Ls~N~l~ 130 (417)
.++|+.++||.|-+.. ++. +.++..|++|.|.+|.+....+ ...-+.|+++...+|++.
T Consensus 91 ~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrle 170 (382)
T KOG1909|consen 91 CPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLE 170 (382)
T ss_pred CCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccc
Confidence 5689999999998874 222 6678899999999999875321 345678999999999997
Q ss_pred cccC------CccccccceeEeecCCCCCcC------CCCCCCCCcEEeccCCccCcchhh---hhhhCCCCcCEEeccC
Q psy13376 131 QIQG------LDTLVNLKVLNLKMNRIETIE------GLDHLEKLELFNIAANRIQSLASL---VYLRRFKHLGRLNIER 195 (417)
Q Consensus 131 ~l~~------~~~l~~L~~L~Ls~N~i~~l~------~l~~l~~L~~L~Ls~N~i~~l~~~---~~l~~l~~L~~L~L~~ 195 (417)
.-+. |...+.|+.+.++.|.|..-. ++..+++|++|||++|-++.-.+. ..+..|++|+.+++++
T Consensus 171 n~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~d 250 (382)
T KOG1909|consen 171 NGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGD 250 (382)
T ss_pred cccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccc
Confidence 6652 677789999999999886432 478899999999999988864432 2567788999999999
Q ss_pred CCCCCCCCccH--HHHhcCCCcccccCcccCHHHHH-HHHHHHhhhhhHHHHHhHHHHHH
Q psy13376 196 NPVCDKENVDG--FAIAMVPQLQCYNNHIILEDERR-TALEQHMYDVRTETLKDLMVQRE 252 (417)
Q Consensus 196 N~l~~~~~~~~--~~~~~l~~L~~Ld~~~~~~~~~~-~~~~~~~~~l~~L~~l~~~~~~~ 252 (417)
|.+..-..+.. ..-...|+|+.+++..+...... .+-.......+.|..+++..++.
T Consensus 251 cll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 251 CLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred cccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 99887655322 12334788998887776542211 11122233355566666555554
No 45
>KOG1909|consensus
Probab=98.45 E-value=9.8e-08 Score=91.02 Aligned_cols=128 Identities=24% Similarity=0.218 Sum_probs=67.6
Q ss_pred cccccEEEeecCCCCCCCC------cCCCcccceEeeeCCCCCCcC------CCCCCccCceeeeeCCCCCccc------
Q psy13376 72 YKLIKAVNLRIKTLRKIEN------LWMMENLVELDLSMNHIGVIE------NLDQLVCLEKLDLGYNRIEQIQ------ 133 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~------l~~l~~L~~L~Ls~N~l~~l~------~l~~l~~L~~L~Ls~N~l~~l~------ 133 (417)
-+.|+++....|++..-+. |...+.|+.+.++.|.|..-. .+..+++|+.|||..|-++.-.
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 4456666666666655432 445566666666666655221 2556666666666666655322
Q ss_pred CCccccccceeEeecCCCCCcCC-------CCCCCCCcEEeccCCccCcchhh---hhhhCCCCcCEEeccCCCCC
Q psy13376 134 GLDTLVNLKVLNLKMNRIETIEG-------LDHLEKLELFNIAANRIQSLASL---VYLRRFKHLGRLNIERNPVC 199 (417)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~i~~l~~-------l~~l~~L~~L~Ls~N~i~~l~~~---~~l~~l~~L~~L~L~~N~l~ 199 (417)
.++.+++|+.|++++|.++.-.. -...|+|+.|.+.+|.|+.-... ..+...|.|..|+|++|.+.
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 15555566666666666554321 12345666666666665542110 12334555666666666664
No 46
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.31 E-value=5.1e-07 Score=61.03 Aligned_cols=38 Identities=47% Similarity=0.556 Sum_probs=16.0
Q ss_pred ccceEeeeCCCCCCcCC-CCCCccCceeeeeCCCCCccc
Q psy13376 96 NLVELDLSMNHIGVIEN-LDQLVCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 96 ~L~~L~Ls~N~l~~l~~-l~~l~~L~~L~Ls~N~l~~l~ 133 (417)
+|++|++++|+|+.+++ +++|++|++|++++|+|++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~ 40 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDIS 40 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEG
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCc
Confidence 34444444444444444 444444444444444444433
No 47
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.28 E-value=6e-07 Score=60.71 Aligned_cols=39 Identities=33% Similarity=0.537 Sum_probs=21.2
Q ss_pred ccceeEeecCCCCCcCC-CCCCCCCcEEeccCCccCcchh
Q psy13376 140 NLKVLNLKMNRIETIEG-LDHLEKLELFNIAANRIQSLAS 178 (417)
Q Consensus 140 ~L~~L~Ls~N~i~~l~~-l~~l~~L~~L~Ls~N~i~~l~~ 178 (417)
+|++|++++|+|+++++ ++.|++|+.|++++|+|+++++
T Consensus 2 ~L~~L~l~~N~i~~l~~~l~~l~~L~~L~l~~N~i~~i~~ 41 (44)
T PF12799_consen 2 NLEELDLSNNQITDLPPELSNLPNLETLNLSNNPISDISP 41 (44)
T ss_dssp T-SEEEETSSS-SSHGGHGTTCTTSSEEEETSSCCSBEGG
T ss_pred cceEEEccCCCCcccCchHhCCCCCCEEEecCCCCCCCcC
Confidence 45555555555555554 5555566666666665555544
No 48
>PLN03150 hypothetical protein; Provisional
Probab=98.25 E-value=1.7e-06 Score=92.07 Aligned_cols=100 Identities=26% Similarity=0.416 Sum_probs=72.7
Q ss_pred cceEeeeCCCCC-CcCC-CCCCccCceeeeeCCCCC-cccC-CccccccceeEeecCCCCC-cC-CCCCCCCCcEEeccC
Q psy13376 97 LVELDLSMNHIG-VIEN-LDQLVCLEKLDLGYNRIE-QIQG-LDTLVNLKVLNLKMNRIET-IE-GLDHLEKLELFNIAA 170 (417)
Q Consensus 97 L~~L~Ls~N~l~-~l~~-l~~l~~L~~L~Ls~N~l~-~l~~-~~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 170 (417)
++.|+|++|.++ .+|. +..+++|+.|+|++|.++ .+|. +..+++|+.|+|++|.++. +| .++.+++|++|++++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 677888888887 3443 778888888888888886 5664 7888888888888888874 44 477888888888888
Q ss_pred CccCc-chhhhhhhC-CCCcCEEeccCCCC
Q psy13376 171 NRIQS-LASLVYLRR-FKHLGRLNIERNPV 198 (417)
Q Consensus 171 N~i~~-l~~~~~l~~-l~~L~~L~L~~N~l 198 (417)
|.++. +|. .+.. ..++..+++.+|+.
T Consensus 500 N~l~g~iP~--~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 500 NSLSGRVPA--ALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CcccccCCh--HHhhccccCceEEecCCcc
Confidence 88774 333 2332 34567788888764
No 49
>KOG4579|consensus
Probab=98.22 E-value=3.6e-08 Score=82.32 Aligned_cols=104 Identities=22% Similarity=0.277 Sum_probs=56.2
Q ss_pred cceEeeeCCCCCCcCC----CCCCccCceeeeeCCCCCcccC-Cc-cccccceeEeecCCCCCcC-CCCCCCCCcEEecc
Q psy13376 97 LVELDLSMNHIGVIEN----LDQLVCLEKLDLGYNRIEQIQG-LD-TLVNLKVLNLKMNRIETIE-GLDHLEKLELFNIA 169 (417)
Q Consensus 97 L~~L~Ls~N~l~~l~~----l~~l~~L~~L~Ls~N~l~~l~~-~~-~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls 169 (417)
+..++|+.|++-.++. +.....|+..+|++|.++++|. |. ..+.++.|+|++|.|+++| .+..++.|+.|+++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~ 108 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLR 108 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccc
Confidence 4445555555554431 4444555555666666665553 22 3345566666666666665 35556666666666
Q ss_pred CCccCcchhhhhhhCCCCcCEEeccCCCCCCCC
Q psy13376 170 ANRIQSLASLVYLRRFKHLGRLNIERNPVCDKE 202 (417)
Q Consensus 170 ~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~ 202 (417)
.|.+...+.+ +..+.++-.|+..+|.+..++
T Consensus 109 ~N~l~~~p~v--i~~L~~l~~Lds~~na~~eid 139 (177)
T KOG4579|consen 109 FNPLNAEPRV--IAPLIKLDMLDSPENARAEID 139 (177)
T ss_pred cCccccchHH--HHHHHhHHHhcCCCCccccCc
Confidence 6666555442 233555556666666555554
No 50
>PLN03150 hypothetical protein; Provisional
Probab=98.13 E-value=3.7e-06 Score=89.60 Aligned_cols=100 Identities=32% Similarity=0.443 Sum_probs=82.7
Q ss_pred cccEEEeecCCCCCC-CC-cCCCcccceEeeeCCCCC-CcCC-CCCCccCceeeeeCCCCC-cccC-CccccccceeEee
Q psy13376 74 LIKAVNLRIKTLRKI-EN-LWMMENLVELDLSMNHIG-VIEN-LDQLVCLEKLDLGYNRIE-QIQG-LDTLVNLKVLNLK 147 (417)
Q Consensus 74 ~L~~L~Ls~N~i~~i-~~-l~~l~~L~~L~Ls~N~l~-~l~~-l~~l~~L~~L~Ls~N~l~-~l~~-~~~l~~L~~L~Ls 147 (417)
.++.|+|++|.++.. +. +..+++|+.|+|++|.++ .+|. +..+++|+.|+|++|+++ .+|. +..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 378899999999854 43 889999999999999998 6664 999999999999999998 5665 8999999999999
Q ss_pred cCCCCC-cC-CCCC-CCCCcEEeccCCcc
Q psy13376 148 MNRIET-IE-GLDH-LEKLELFNIAANRI 173 (417)
Q Consensus 148 ~N~i~~-l~-~l~~-l~~L~~L~Ls~N~i 173 (417)
+|.++. +| .+.. ..++..+++.+|..
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~ 527 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAG 527 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcc
Confidence 999984 45 2433 34677888888853
No 51
>KOG2982|consensus
Probab=98.11 E-value=1.4e-06 Score=81.60 Aligned_cols=156 Identities=18% Similarity=0.174 Sum_probs=104.0
Q ss_pred cccccEEEeecCCCCCCCC----cCCCcccceEeeeCCCCCC-cCCC-CCCccCceeeeeCCCCCc--ccC-Cccccccc
Q psy13376 72 YKLIKAVNLRIKTLRKIEN----LWMMENLVELDLSMNHIGV-IENL-DQLVCLEKLDLGYNRIEQ--IQG-LDTLVNLK 142 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~----l~~l~~L~~L~Ls~N~l~~-l~~l-~~l~~L~~L~Ls~N~l~~--l~~-~~~l~~L~ 142 (417)
.+.++.++|.+|.|++++. +.++|.|+.|+++.|.+.. |..+ ..+.+|++|-|.+..+.. ... +..+|.++
T Consensus 70 ~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vt 149 (418)
T KOG2982|consen 70 VTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVT 149 (418)
T ss_pred hhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhh
Confidence 7889999999999999865 6799999999999999884 3434 366799999999988753 333 77889999
Q ss_pred eeEeecCCCCCcC----CCCCC-CCCcEEeccCCccCcchhhhh-hhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcc
Q psy13376 143 VLNLKMNRIETIE----GLDHL-EKLELFNIAANRIQSLASLVY-LRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQ 216 (417)
Q Consensus 143 ~L~Ls~N~i~~l~----~l~~l-~~L~~L~Ls~N~i~~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~ 216 (417)
.|.+|.|.+..+. ..... +.+++|+...|....|..... -+.+|++..+.+..||+.+... ......+|.+.
T Consensus 150 elHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~--ek~se~~p~~~ 227 (418)
T KOG2982|consen 150 ELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESS--EKGSEPFPSLS 227 (418)
T ss_pred hhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhh--cccCCCCCcch
Confidence 9999999766542 12222 255566666665544443221 2346777777777777765443 12233455555
Q ss_pred cccCcccCHHHHH
Q psy13376 217 CYNNHIILEDERR 229 (417)
Q Consensus 217 ~Ld~~~~~~~~~~ 229 (417)
.|++.......+.
T Consensus 228 ~LnL~~~~idswa 240 (418)
T KOG2982|consen 228 CLNLGANNIDSWA 240 (418)
T ss_pred hhhhcccccccHH
Confidence 5555555444443
No 52
>KOG2123|consensus
Probab=98.06 E-value=1.9e-07 Score=86.61 Aligned_cols=100 Identities=27% Similarity=0.314 Sum_probs=70.5
Q ss_pred CCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCcccCCccccccceeEeecCCCCCcCC---CCCCCCCcEEecc
Q psy13376 93 MMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQGLDTLVNLKVLNLKMNRIETIEG---LDHLEKLELFNIA 169 (417)
Q Consensus 93 ~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L~Ls~N~i~~l~~---l~~l~~L~~L~Ls 169 (417)
.+.+.+.|++.|+.+++|.-..+|+.|++|.||-|+|+++.++..|++|++|+|..|.|.++.. +.++++|+.|+|.
T Consensus 17 dl~~vkKLNcwg~~L~DIsic~kMp~lEVLsLSvNkIssL~pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~LWL~ 96 (388)
T KOG2123|consen 17 DLENVKKLNCWGCGLDDISICEKMPLLEVLSLSVNKISSLAPLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTLWLD 96 (388)
T ss_pred HHHHhhhhcccCCCccHHHHHHhcccceeEEeeccccccchhHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhHhhc
Confidence 3456667777777777776667777778888888888777777777788888888887777753 6677788888887
Q ss_pred CCccCcchh----hhhhhCCCCcCEEe
Q psy13376 170 ANRIQSLAS----LVYLRRFKHLGRLN 192 (417)
Q Consensus 170 ~N~i~~l~~----~~~l~~l~~L~~L~ 192 (417)
.|.-..-.+ ...++.+|+|+.||
T Consensus 97 ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 97 ENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred cCCcccccchhHHHHHHHHcccchhcc
Confidence 776443221 12456677777766
No 53
>KOG4579|consensus
Probab=98.03 E-value=1.8e-07 Score=78.21 Aligned_cols=129 Identities=19% Similarity=0.279 Sum_probs=88.7
Q ss_pred ccccEEEeecCCCCCCCC----cCCCcccceEeeeCCCCCCcCC-C-CCCccCceeeeeCCCCCcccC-CccccccceeE
Q psy13376 73 KLIKAVNLRIKTLRKIEN----LWMMENLVELDLSMNHIGVIEN-L-DQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLN 145 (417)
Q Consensus 73 ~~L~~L~Ls~N~i~~i~~----l~~l~~L~~L~Ls~N~l~~l~~-l-~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~ 145 (417)
..+..++|+.+.+-.++. +.....|+..+|++|.+.++|. | .+++.++.|++++|.|+++|. +..++.|+.|+
T Consensus 27 kE~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 27 KELHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLN 106 (177)
T ss_pred HHhhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcc
Confidence 345567777777776644 4555667777888888888774 3 455678888888888888885 88888888888
Q ss_pred eecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCC
Q psy13376 146 LKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKEN 203 (417)
Q Consensus 146 Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~ 203 (417)
++.|.+...+ .+..+.++-.|+..+|.+..++--......+- ..++..+|+.+-..
T Consensus 107 l~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~a--l~~lgnepl~~~~~ 163 (177)
T KOG4579|consen 107 LRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPA--LIKLGNEPLGDETK 163 (177)
T ss_pred cccCccccchHHHHHHHhHHHhcCCCCccccCcHHHhccccHH--HHHhcCCcccccCc
Confidence 8888887765 35557788888888888777665212222332 33446667766443
No 54
>KOG4658|consensus
Probab=97.99 E-value=6.3e-06 Score=90.34 Aligned_cols=125 Identities=23% Similarity=0.303 Sum_probs=89.9
Q ss_pred cccccEEEeecCCCCCCCCcCCCcccceEeeeCCC--CCCcCC--CCCCccCceeeeeCCC-CCcccC-CccccccceeE
Q psy13376 72 YKLIKAVNLRIKTLRKIENLWMMENLVELDLSMNH--IGVIEN--LDQLVCLEKLDLGYNR-IEQIQG-LDTLVNLKVLN 145 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N~--l~~l~~--l~~l~~L~~L~Ls~N~-l~~l~~-~~~l~~L~~L~ 145 (417)
....+.+.+-+|.+..++.-...+.|+.|-+.+|. +..++. |..++.|++|||++|. +..+|. ++.+.+|++|+
T Consensus 522 ~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred hhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 45667777777777777665566678888888885 666654 7778888888888764 567775 77788888888
Q ss_pred eecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCC
Q psy13376 146 LKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNP 197 (417)
Q Consensus 146 Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~ 197 (417)
+++..|+.+| +++++..|.+|++..+.-....+ .....+++|++|.+....
T Consensus 602 L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~-~i~~~L~~Lr~L~l~~s~ 653 (889)
T KOG4658|consen 602 LSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIP-GILLELQSLRVLRLPRSA 653 (889)
T ss_pred ccCCCccccchHHHHHHhhheecccccccccccc-chhhhcccccEEEeeccc
Confidence 8888888887 67888888888888775332222 234557888888876655
No 55
>KOG3665|consensus
Probab=97.96 E-value=3.6e-06 Score=89.94 Aligned_cols=129 Identities=19% Similarity=0.216 Sum_probs=71.9
Q ss_pred cccccEEEeecCCCCCCCC----cCCCcccceEeeeCCCCCCcC--C-CCCCccCceeeeeCCCCCcccCCcccccccee
Q psy13376 72 YKLIKAVNLRIKTLRKIEN----LWMMENLVELDLSMNHIGVIE--N-LDQLVCLEKLDLGYNRIEQIQGLDTLVNLKVL 144 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~----l~~l~~L~~L~Ls~N~l~~l~--~-l~~l~~L~~L~Ls~N~l~~l~~~~~l~~L~~L 144 (417)
-.+|++|++++...-.-.. -..+|+|+.|.+++-.+..-. . ..++|+|..||+|+.+++.+.+++.+++|+.|
T Consensus 121 r~nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~LknLq~L 200 (699)
T KOG3665|consen 121 RQNLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSGISRLKNLQVL 200 (699)
T ss_pred HHhhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHHHhccccHHHH
Confidence 3456666666643321111 234666666666665554322 1 45666666777777777666666666666666
Q ss_pred EeecCCCCCcC---CCCCCCCCcEEeccCCccCcchh-----hhhhhCCCCcCEEeccCCCCCC
Q psy13376 145 NLKMNRIETIE---GLDHLEKLELFNIAANRIQSLAS-----LVYLRRFKHLGRLNIERNPVCD 200 (417)
Q Consensus 145 ~Ls~N~i~~l~---~l~~l~~L~~L~Ls~N~i~~l~~-----~~~l~~l~~L~~L~L~~N~l~~ 200 (417)
.+.+=.+..-. .+-.+++|++||+|.......+. ++.-..+|+|+.||.+++.+..
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~ 264 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINE 264 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhH
Confidence 66655554432 35566667777776665443321 1122346667777776665543
No 56
>KOG3665|consensus
Probab=97.87 E-value=9.2e-06 Score=86.87 Aligned_cols=132 Identities=16% Similarity=0.153 Sum_probs=100.8
Q ss_pred CCcchhhhhcccccEEEeecCCCCCCC--C-cCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCCccc---CCc
Q psy13376 63 TNLAEKLQIYKLIKAVNLRIKTLRKIE--N-LWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIEQIQ---GLD 136 (417)
Q Consensus 63 n~i~~l~~ll~~L~~L~Ls~N~i~~i~--~-l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l~---~~~ 136 (417)
+-+.++...+|+|++|.+++-.+..-+ . +.++|+|..||+|+.+++.+.+++.+++|+.|.+.+=.+..-. .+.
T Consensus 138 ~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl~GIS~LknLq~L~mrnLe~e~~~~l~~LF 217 (699)
T KOG3665|consen 138 GWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNLSGISRLKNLQVLSMRNLEFESYQDLIDLF 217 (699)
T ss_pred cHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCcHHHhccccHHHHhccCCCCCchhhHHHHh
Confidence 334444444999999999997776542 2 6789999999999999999999999999999999888777544 477
Q ss_pred cccccceeEeecCCCCCcC--------CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEecc
Q psy13376 137 TLVNLKVLNLKMNRIETIE--------GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIE 194 (417)
Q Consensus 137 ~l~~L~~L~Ls~N~i~~l~--------~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~ 194 (417)
.+++|+.||+|...-..-+ .-..+|+|+.||.|++.+..--.-..+..-|+|+.+..-
T Consensus 218 ~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i~~~ 283 (699)
T KOG3665|consen 218 NLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQIAAL 283 (699)
T ss_pred cccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhhhhh
Confidence 8999999999987654432 345699999999999988763222334556666666543
No 57
>KOG2739|consensus
Probab=97.72 E-value=1.3e-05 Score=74.08 Aligned_cols=101 Identities=25% Similarity=0.271 Sum_probs=58.8
Q ss_pred CCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCCCC---cccC-CccccccceeEeecCCCCCc---CCCCCCCCCcE
Q psy13376 93 MMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNRIE---QIQG-LDTLVNLKVLNLKMNRIETI---EGLDHLEKLEL 165 (417)
Q Consensus 93 ~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~---~l~~-~~~l~~L~~L~Ls~N~i~~l---~~l~~l~~L~~ 165 (417)
.+..|+.|.+.+..++.+..+..+++|+.|.+|.|... .++. ...+|+|++|++++|+|+.+ +++..+.+|..
T Consensus 41 ~~~~le~ls~~n~gltt~~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~ 120 (260)
T KOG2739|consen 41 EFVELELLSVINVGLTTLTNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKS 120 (260)
T ss_pred cccchhhhhhhccceeecccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhh
Confidence 34455555566666666666666666777777666333 2222 33446777777777776644 34555666777
Q ss_pred EeccCCccCcchh--hhhhhCCCCcCEEec
Q psy13376 166 FNIAANRIQSLAS--LVYLRRFKHLGRLNI 193 (417)
Q Consensus 166 L~Ls~N~i~~l~~--~~~l~~l~~L~~L~L 193 (417)
|++.+|..+.+.. -..|.-+++|+.|+-
T Consensus 121 Ldl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 121 LDLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hhcccCCccccccHHHHHHHHhhhhccccc
Confidence 7777776554322 124556666666654
No 58
>KOG4658|consensus
Probab=97.68 E-value=3.4e-05 Score=84.63 Aligned_cols=136 Identities=22% Similarity=0.227 Sum_probs=109.8
Q ss_pred CCCCCCCCcCCCcccceEeeeCCCCCCcCCCCCCccCceeeeeCCC--CCcccC--CccccccceeEeecCC-CCCcC-C
Q psy13376 83 KTLRKIENLWMMENLVELDLSMNHIGVIENLDQLVCLEKLDLGYNR--IEQIQG--LDTLVNLKVLNLKMNR-IETIE-G 156 (417)
Q Consensus 83 N~i~~i~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~--l~~l~~--~~~l~~L~~L~Ls~N~-i~~l~-~ 156 (417)
.+...++........+...+-+|.+..++.-...+.|++|-+..|. +..++. |..+|.|+.|||++|. +..+| .
T Consensus 511 ~~~~~~~~~~~~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~ 590 (889)
T KOG4658|consen 511 VGLSEIPQVKSWNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSS 590 (889)
T ss_pred cCccccccccchhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChH
Confidence 3445556666778889999999999988765566789999999997 777776 8999999999999764 66777 5
Q ss_pred CCCCCCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCccc
Q psy13376 157 LDHLEKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHII 223 (417)
Q Consensus 157 l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~ 223 (417)
++.+-+|++|++++..|..+|. .+..+.+|.+|++..+.-....+ .+...+++|++|.+..-
T Consensus 591 I~~Li~LryL~L~~t~I~~LP~--~l~~Lk~L~~Lnl~~~~~l~~~~---~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 591 IGELVHLRYLDLSDTGISHLPS--GLGNLKKLIYLNLEVTGRLESIP---GILLELQSLRVLRLPRS 652 (889)
T ss_pred HhhhhhhhcccccCCCccccch--HHHHHHhhheecccccccccccc---chhhhcccccEEEeecc
Confidence 8889999999999999999986 67899999999999876443332 35666899998876544
No 59
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.66 E-value=8e-05 Score=69.31 Aligned_cols=183 Identities=20% Similarity=0.170 Sum_probs=131.0
Q ss_pred cccccEEEeecCCCCCC-C-C----cCCCcccceEeeeCCCCCCcCC--C-------------CCCccCceeeeeCCCCC
Q psy13376 72 YKLIKAVNLRIKTLRKI-E-N----LWMMENLVELDLSMNHIGVIEN--L-------------DQLVCLEKLDLGYNRIE 130 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i-~-~----l~~l~~L~~L~Ls~N~l~~l~~--l-------------~~l~~L~~L~Ls~N~l~ 130 (417)
+++++..+||.|.|..- + . +++-+.|.+|.+++|.+..+.+ + ..-|.|++.....|++.
T Consensus 91 cp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 91 CPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 78999999999998753 2 2 6788899999999999986642 2 25678999999999998
Q ss_pred cccC------CccccccceeEeecCCCCCcC-------CCCCCCCCcEEeccCCccCcchhh---hhhhCCCCcCEEecc
Q psy13376 131 QIQG------LDTLVNLKVLNLKMNRIETIE-------GLDHLEKLELFNIAANRIQSLASL---VYLRRFKHLGRLNIE 194 (417)
Q Consensus 131 ~l~~------~~~l~~L~~L~Ls~N~i~~l~-------~l~~l~~L~~L~Ls~N~i~~l~~~---~~l~~l~~L~~L~L~ 194 (417)
..+. +..-.+|+.+.+..|.|..-. ++..+.+|+.||+.+|-++...+. ..+..|+.|+.|.+.
T Consensus 171 ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrEL~ln 250 (388)
T COG5238 171 NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRELRLN 250 (388)
T ss_pred cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhhcccc
Confidence 7663 444468999999999987431 466788999999999998865441 245678889999999
Q ss_pred CCCCCCCCC---ccHHHHhcCCCcccccCcccCH--HHHH--HHHHHHhhhhhHHHHHhHHHHHHHH
Q psy13376 195 RNPVCDKEN---VDGFAIAMVPQLQCYNNHIILE--DERR--TALEQHMYDVRTETLKDLMVQRERQ 254 (417)
Q Consensus 195 ~N~l~~~~~---~~~~~~~~l~~L~~Ld~~~~~~--~~~~--~~~~~~~~~l~~L~~l~~~~~~~~~ 254 (417)
+|-++.-.. ++.+.-...|+|..|-+.+... ..+. ....+-...++.|..+...+|++.+
T Consensus 251 DClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 251 DCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred chhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 998876543 1223334567777776555432 1111 1334456677778777777777664
No 60
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.54 E-value=0.00022 Score=59.51 Aligned_cols=115 Identities=17% Similarity=0.300 Sum_probs=57.7
Q ss_pred cCCCcccceEeeeCCCCCCcCC--CCCCccCceeeeeCCCCCcccC--CccccccceeEeecCCCCCcC--CCCCCCCCc
Q psy13376 91 LWMMENLVELDLSMNHIGVIEN--LDQLVCLEKLDLGYNRIEQIQG--LDTLVNLKVLNLKMNRIETIE--GLDHLEKLE 164 (417)
Q Consensus 91 l~~l~~L~~L~Ls~N~l~~l~~--l~~l~~L~~L~Ls~N~l~~l~~--~~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~ 164 (417)
|..+++|+.+.+.. .+..++. |.++++|+.+.+.++ +..++. |..+++++.+.+.+ .+..++ .|..+++|+
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~ 84 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLK 84 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTEC
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccccccccccccccccc
Confidence 66677777777764 5666653 777777888887764 776664 77777788888854 555554 466777888
Q ss_pred EEeccCCccCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCc
Q psy13376 165 LFNIAANRIQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQL 215 (417)
Q Consensus 165 ~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 215 (417)
.+.+..+ +..++. ..+..+ +++.+.+.. .+..++. ..+..+++|
T Consensus 85 ~i~~~~~-~~~i~~-~~f~~~-~l~~i~~~~-~~~~i~~---~~F~~~~~l 128 (129)
T PF13306_consen 85 NIDIPSN-ITEIGS-SSFSNC-NLKEINIPS-NITKIEE---NAFKNCTKL 128 (129)
T ss_dssp EEEETTT--BEEHT-TTTTT--T--EEE-TT-B-SS-------GGG-----
T ss_pred ccccCcc-ccEEch-hhhcCC-CceEEEECC-CccEECC---ccccccccC
Confidence 8888665 666655 456666 777777765 4444443 345555554
No 61
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.44 E-value=0.00047 Score=68.81 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=37.7
Q ss_pred cccccEEEeecCCCCCCCCcCCCcccceEeeeCC-CCCCcCC-CCCCccCceeeeeCC-CCCcccCCccccccceeEeec
Q psy13376 72 YKLIKAVNLRIKTLRKIENLWMMENLVELDLSMN-HIGVIEN-LDQLVCLEKLDLGYN-RIEQIQGLDTLVNLKVLNLKM 148 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~l~~l~~L~~L~Ls~N-~l~~l~~-l~~l~~L~~L~Ls~N-~l~~l~~~~~l~~L~~L~Ls~ 148 (417)
+.+++.|++++|.++.+|.+ .++|+.|.++++ .++.+|. + .++|+.|++++| .+..+| ++|+.|+++.
T Consensus 51 ~~~l~~L~Is~c~L~sLP~L--P~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~sLP-----~sLe~L~L~~ 121 (426)
T PRK15386 51 ARASGRLYIKDCDIESLPVL--PNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEISGLP-----ESVRSLEIKG 121 (426)
T ss_pred hcCCCEEEeCCCCCcccCCC--CCCCcEEEccCCCCcccCCchh--hhhhhheEccCcccccccc-----cccceEEeCC
Confidence 45666666766666666532 234666666653 4445543 2 236666666666 444433 2355555554
Q ss_pred CC
Q psy13376 149 NR 150 (417)
Q Consensus 149 N~ 150 (417)
+.
T Consensus 122 n~ 123 (426)
T PRK15386 122 SA 123 (426)
T ss_pred CC
Confidence 44
No 62
>KOG2120|consensus
Probab=97.42 E-value=4.6e-06 Score=78.31 Aligned_cols=64 Identities=11% Similarity=0.104 Sum_probs=31.0
Q ss_pred CCCCCCcEEeccCCc-cCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCcccccCcccC
Q psy13376 158 DHLEKLELFNIAANR-IQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQLQCYNNHIIL 224 (417)
Q Consensus 158 ~~l~~L~~L~Ls~N~-i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~Ld~~~~~ 224 (417)
..+++|.+|||++|. ++. .-+..+-+++.|++|.++.|.. +++-....+...|.|.+||...|-
T Consensus 310 ~rcp~l~~LDLSD~v~l~~-~~~~~~~kf~~L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 310 RRCPNLVHLDLSDSVMLKN-DCFQEFFKFNYLQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred HhCCceeeeccccccccCc-hHHHHHHhcchheeeehhhhcC--CChHHeeeeccCcceEEEEecccc
Confidence 345566666666553 333 3334445556666666655432 222112233455666666655443
No 63
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=97.38 E-value=0.00021 Score=66.61 Aligned_cols=154 Identities=19% Similarity=0.197 Sum_probs=101.0
Q ss_pred cccccEEEeecCCCCCCC------CcCCCcccceEeeeCCCCCC----c--------CCCCCCccCceeeeeCCCCC-cc
Q psy13376 72 YKLIKAVNLRIKTLRKIE------NLWMMENLVELDLSMNHIGV----I--------ENLDQLVCLEKLDLGYNRIE-QI 132 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~------~l~~l~~L~~L~Ls~N~l~~----l--------~~l~~l~~L~~L~Ls~N~l~-~l 132 (417)
+..++.++||+|-|..-. .+.+-.+|+..+++.-.... + +.+-+||+|+..+||.|.+. ..
T Consensus 29 ~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~~~ 108 (388)
T COG5238 29 MDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGSEF 108 (388)
T ss_pred hcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCccc
Confidence 677888899998887521 15556677777776543332 1 12557888888888888875 33
Q ss_pred cC-----CccccccceeEeecCCCCCcCC---------------CCCCCCCcEEeccCCccCcchhh---hhhhCCCCcC
Q psy13376 133 QG-----LDTLVNLKVLNLKMNRIETIEG---------------LDHLEKLELFNIAANRIQSLASL---VYLRRFKHLG 189 (417)
Q Consensus 133 ~~-----~~~l~~L~~L~Ls~N~i~~l~~---------------l~~l~~L~~L~Ls~N~i~~l~~~---~~l~~l~~L~ 189 (417)
|. +++-+.|.+|.+++|.+..+.+ ..+-|.|++.....|++...+.. ..+..-.+|+
T Consensus 109 ~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk 188 (388)
T COG5238 109 PEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLENGSKELSAALLESHENLK 188 (388)
T ss_pred chHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhccCcHHHHHHHHHhhcCce
Confidence 32 5666788888888888775531 24557788888888888765441 1233335788
Q ss_pred EEeccCCCCCCCC--CccHHHHhcCCCcccccCcccCH
Q psy13376 190 RLNIERNPVCDKE--NVDGFAIAMVPQLQCYNNHIILE 225 (417)
Q Consensus 190 ~L~L~~N~l~~~~--~~~~~~~~~l~~L~~Ld~~~~~~ 225 (417)
.+.+..|.|.... .....-...+.+|+.||+..+.-
T Consensus 189 ~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtf 226 (388)
T COG5238 189 EVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTF 226 (388)
T ss_pred eEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccch
Confidence 8888888776532 12223445677888888877654
No 64
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.32 E-value=0.00087 Score=66.97 Aligned_cols=130 Identities=12% Similarity=0.152 Sum_probs=88.0
Q ss_pred cccccccCCcchhhhhcccccEEEeec-CCCCCCCCcCCCcccceEeeeCC-CCCCcCCCCCCccCceeeeeCCCCCccc
Q psy13376 56 LSLLQESTNLAEKLQIYKLIKAVNLRI-KTLRKIENLWMMENLVELDLSMN-HIGVIENLDQLVCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 56 ~~l~~~~n~i~~l~~ll~~L~~L~Ls~-N~i~~i~~l~~l~~L~~L~Ls~N-~l~~l~~l~~l~~L~~L~Ls~N~l~~l~ 133 (417)
..|.++.+.+..++.+.++|++|.+++ +.++.++..- .++|+.|++++| .+..+| .+|+.|+++.+....++
T Consensus 55 ~~L~Is~c~L~sLP~LP~sLtsL~Lsnc~nLtsLP~~L-P~nLe~L~Ls~Cs~L~sLP-----~sLe~L~L~~n~~~~L~ 128 (426)
T PRK15386 55 GRLYIKDCDIESLPVLPNELTEITIENCNNLTTLPGSI-PEGLEKLTVCHCPEISGLP-----ESVRSLEIKGSATDSIK 128 (426)
T ss_pred CEEEeCCCCCcccCCCCCCCcEEEccCCCCcccCCchh-hhhhhheEccCcccccccc-----cccceEEeCCCCCcccc
Confidence 355678888888886677899999987 5666666521 368999999998 666554 36788888887766554
Q ss_pred CCccccccceeEeecCCCCCcCCCC-CC-CCCcEEeccCCccCcchhhhhhhCCCCcCEEeccCCC
Q psy13376 134 GLDTLVNLKVLNLKMNRIETIEGLD-HL-EKLELFNIAANRIQSLASLVYLRRFKHLGRLNIERNP 197 (417)
Q Consensus 134 ~~~~l~~L~~L~Ls~N~i~~l~~l~-~l-~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~L~L~~N~ 197 (417)
.+. ++|+.|.+.+++......+. .+ ++|++|++++|....+|. .-..+|+.|+++.+.
T Consensus 129 ~LP--ssLk~L~I~~~n~~~~~~lp~~LPsSLk~L~Is~c~~i~LP~----~LP~SLk~L~ls~n~ 188 (426)
T PRK15386 129 NVP--NGLTSLSINSYNPENQARIDNLISPSLKTLSLTGCSNIILPE----KLPESLQSITLHIEQ 188 (426)
T ss_pred cCc--chHhheeccccccccccccccccCCcccEEEecCCCcccCcc----cccccCcEEEecccc
Confidence 432 36788887553311111111 22 589999999988666553 122589999998774
No 65
>KOG2120|consensus
Probab=97.22 E-value=3e-05 Score=72.93 Aligned_cols=149 Identities=17% Similarity=0.156 Sum_probs=109.4
Q ss_pred ccccEEEeecCCCCCC--CC-cCCCcccceEeeeCCCCCCc-C-CCCCCccCceeeeeCCC-CCcccC---Cccccccce
Q psy13376 73 KLIKAVNLRIKTLRKI--EN-LWMMENLVELDLSMNHIGVI-E-NLDQLVCLEKLDLGYNR-IEQIQG---LDTLVNLKV 143 (417)
Q Consensus 73 ~~L~~L~Ls~N~i~~i--~~-l~~l~~L~~L~Ls~N~l~~l-~-~l~~l~~L~~L~Ls~N~-l~~l~~---~~~l~~L~~ 143 (417)
+.++.|+|++..|+.- .. +..+.+|+.|.+.++++.+- - .+.+-.+|+.|+++.+. +++... +..++.|..
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~ 264 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDE 264 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhh
Confidence 4589999999888743 22 77889999999999999853 2 37888899999998864 665542 788999999
Q ss_pred eEeecCCCCCcC---CCCC-CCCCcEEeccCCc----cCcchhhhhhhCCCCcCEEeccCCCCCCCCCccHHHHhcCCCc
Q psy13376 144 LNLKMNRIETIE---GLDH-LEKLELFNIAANR----IQSLASLVYLRRFKHLGRLNIERNPVCDKENVDGFAIAMVPQL 215 (417)
Q Consensus 144 L~Ls~N~i~~l~---~l~~-l~~L~~L~Ls~N~----i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 215 (417)
|+++.+.+..-. .+.+ -++|..|++++.. .+.+.- ..+.+|+|.+|||++|..-...- ...+.+++.|
T Consensus 265 LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~t--L~~rcp~l~~LDLSD~v~l~~~~--~~~~~kf~~L 340 (419)
T KOG2120|consen 265 LNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLST--LVRRCPNLVHLDLSDSVMLKNDC--FQEFFKFNYL 340 (419)
T ss_pred cCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHH--HHHhCCceeeeccccccccCchH--HHHHHhcchh
Confidence 999998875321 1222 2578889998873 222322 34789999999999985443322 3467789999
Q ss_pred ccccCcccCH
Q psy13376 216 QCYNNHIILE 225 (417)
Q Consensus 216 ~~Ld~~~~~~ 225 (417)
++|.+++|-.
T Consensus 341 ~~lSlsRCY~ 350 (419)
T KOG2120|consen 341 QHLSLSRCYD 350 (419)
T ss_pred eeeehhhhcC
Confidence 9999998864
No 66
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.16 E-value=0.0012 Score=55.02 Aligned_cols=111 Identities=18% Similarity=0.313 Sum_probs=63.8
Q ss_pred cccccEEEeecCCCCCCCC--cCCCcccceEeeeCCCCCCcCC--CCCCccCceeeeeCCCCCcccC--CccccccceeE
Q psy13376 72 YKLIKAVNLRIKTLRKIEN--LWMMENLVELDLSMNHIGVIEN--LDQLVCLEKLDLGYNRIEQIQG--LDTLVNLKVLN 145 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~~--l~~l~~L~~L~Ls~N~l~~l~~--l~~l~~L~~L~Ls~N~l~~l~~--~~~l~~L~~L~ 145 (417)
.++|+.+.+.. .+..++. |..+++|+.+.+.++ +..++. |.+++.++.+.+.+ .+..++. |..+++|+.+.
T Consensus 11 ~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~i~ 87 (129)
T PF13306_consen 11 CSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKNID 87 (129)
T ss_dssp -TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECEEE
T ss_pred CCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccccc
Confidence 45678888764 6777754 888989999999885 887764 88888899999976 6766664 88899999999
Q ss_pred eecCCCCCcC--CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcC
Q psy13376 146 LKMNRIETIE--GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLG 189 (417)
Q Consensus 146 Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~ 189 (417)
+..+ +..++ .+.++ +|+.+.+.. .+..++. ..|.++++|+
T Consensus 88 ~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~-~~F~~~~~l~ 129 (129)
T PF13306_consen 88 IPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEE-NAFKNCTKLK 129 (129)
T ss_dssp ETTT--BEEHTTTTTT--T--EEE-TT-B-SS-----GGG------
T ss_pred cCcc-ccEEchhhhcCC-CceEEEECC-CccEECC-ccccccccCC
Confidence 9775 66664 57777 899999876 5666665 5677777764
No 67
>KOG3763|consensus
Probab=96.11 E-value=0.0032 Score=64.14 Aligned_cols=89 Identities=22% Similarity=0.334 Sum_probs=66.3
Q ss_pred cccccceeEeecCCCCCcCCC----CCCCCCcEEeccCC--ccCcchhhhhhhCCCCcCEEeccCCCCCCCCCcc----H
Q psy13376 137 TLVNLKVLNLKMNRIETIEGL----DHLEKLELFNIAAN--RIQSLASLVYLRRFKHLGRLNIERNPVCDKENVD----G 206 (417)
Q Consensus 137 ~l~~L~~L~Ls~N~i~~l~~l----~~l~~L~~L~Ls~N--~i~~l~~~~~l~~l~~L~~L~L~~N~l~~~~~~~----~ 206 (417)
+.+.+..++|++|++..+..+ ...|+|..|+|++| .+.+.+.+..++. ..|+.|.+.|||++.--.++ .
T Consensus 216 n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~-l~Leel~l~GNPlc~tf~~~s~yv~ 294 (585)
T KOG3763|consen 216 NFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKG-LPLEELVLEGNPLCTTFSDRSEYVS 294 (585)
T ss_pred CCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcC-CCHHHeeecCCccccchhhhHHHHH
Confidence 456788888999988887654 34578999999999 6666555544443 46999999999998754332 3
Q ss_pred HHHhcCCCcccccCcccCHH
Q psy13376 207 FAIAMVPQLQCYNNHIILED 226 (417)
Q Consensus 207 ~~~~~l~~L~~Ld~~~~~~~ 226 (417)
.+...+|+|..||+..+...
T Consensus 295 ~i~~~FPKL~~LDG~ev~~~ 314 (585)
T KOG3763|consen 295 AIRELFPKLLRLDGVEVQPE 314 (585)
T ss_pred HHHHhcchheeecCcccCcc
Confidence 45558999999999888753
No 68
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=93.67 E-value=0.042 Score=28.89 Aligned_cols=13 Identities=46% Similarity=0.708 Sum_probs=4.1
Q ss_pred CceeeeeCCCCCc
Q psy13376 119 LEKLDLGYNRIEQ 131 (417)
Q Consensus 119 L~~L~Ls~N~l~~ 131 (417)
|+.|++++|++++
T Consensus 3 L~~L~l~~n~L~~ 15 (17)
T PF13504_consen 3 LRTLDLSNNRLTS 15 (17)
T ss_dssp -SEEEETSS--SS
T ss_pred cCEEECCCCCCCC
Confidence 3444444444433
No 69
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.63 E-value=0.026 Score=31.78 Aligned_cols=15 Identities=47% Similarity=0.565 Sum_probs=6.2
Q ss_pred CceeeeeCCCCCccc
Q psy13376 119 LEKLDLGYNRIEQIQ 133 (417)
Q Consensus 119 L~~L~Ls~N~l~~l~ 133 (417)
|++|++++|+|+.+|
T Consensus 2 L~~Ldls~n~l~~ip 16 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIP 16 (22)
T ss_dssp ESEEEETSSEESEEG
T ss_pred ccEEECCCCcCEeCC
Confidence 344444444444333
No 70
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.28 E-value=0.099 Score=27.46 Aligned_cols=11 Identities=27% Similarity=0.673 Sum_probs=3.1
Q ss_pred CcEEeccCCcc
Q psy13376 163 LELFNIAANRI 173 (417)
Q Consensus 163 L~~L~Ls~N~i 173 (417)
|+.|++++|++
T Consensus 3 L~~L~l~~n~L 13 (17)
T PF13504_consen 3 LRTLDLSNNRL 13 (17)
T ss_dssp -SEEEETSS--
T ss_pred cCEEECCCCCC
Confidence 33333333333
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=91.29 E-value=0.12 Score=28.98 Aligned_cols=16 Identities=31% Similarity=0.638 Sum_probs=9.3
Q ss_pred CcEEeccCCccCcchh
Q psy13376 163 LELFNIAANRIQSLAS 178 (417)
Q Consensus 163 L~~L~Ls~N~i~~l~~ 178 (417)
|++|++++|+|+.+|.
T Consensus 2 L~~Ldls~n~l~~ip~ 17 (22)
T PF00560_consen 2 LEYLDLSGNNLTSIPS 17 (22)
T ss_dssp ESEEEETSSEESEEGT
T ss_pred ccEEECCCCcCEeCCh
Confidence 5566666666665544
No 72
>KOG0473|consensus
Probab=91.15 E-value=0.0056 Score=56.11 Aligned_cols=82 Identities=17% Similarity=0.108 Sum_probs=42.4
Q ss_pred cCCCcccceEeeeCCCCCCcC-CCCCCccCceeeeeCCCCCcccC-CccccccceeEeecCCCCCcC-CCCCCCCCcEEe
Q psy13376 91 LWMMENLVELDLSMNHIGVIE-NLDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMNRIETIE-GLDHLEKLELFN 167 (417)
Q Consensus 91 l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~ 167 (417)
+..+...+.||++.|++..+. .|..++.+..|+++.|.+..+|. +..+..++.+++..|..+..| +++..+.+++++
T Consensus 38 i~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~s~~k~~~~k~~e 117 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPKSQKKEPHPKKNE 117 (326)
T ss_pred hhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCccccccCCcchhh
Confidence 334445555555555555443 25555555555555555555553 444455555555555555554 345555555555
Q ss_pred ccCCc
Q psy13376 168 IAANR 172 (417)
Q Consensus 168 Ls~N~ 172 (417)
+-+|.
T Consensus 118 ~k~~~ 122 (326)
T KOG0473|consen 118 QKKTE 122 (326)
T ss_pred hccCc
Confidence 55554
No 73
>KOG0473|consensus
Probab=90.97 E-value=0.0067 Score=55.58 Aligned_cols=85 Identities=15% Similarity=0.161 Sum_probs=56.1
Q ss_pred CCCCccCceeeeeCCCCCcccC-CccccccceeEeecCCCCCcC-CCCCCCCCcEEeccCCccCcchhhhhhhCCCCcCE
Q psy13376 113 LDQLVCLEKLDLGYNRIEQIQG-LDTLVNLKVLNLKMNRIETIE-GLDHLEKLELFNIAANRIQSLASLVYLRRFKHLGR 190 (417)
Q Consensus 113 l~~l~~L~~L~Ls~N~l~~l~~-~~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~Ls~N~i~~l~~~~~l~~l~~L~~ 190 (417)
+......+.||++.|++..+.. |+.++.|..|+++.|.|..+| .++.+..+..+++.+|..+..|- .++..|.++.
T Consensus 38 i~~~kr~tvld~~s~r~vn~~~n~s~~t~~~rl~~sknq~~~~~~d~~q~~e~~~~~~~~n~~~~~p~--s~~k~~~~k~ 115 (326)
T KOG0473|consen 38 IASFKRVTVLDLSSNRLVNLGKNFSILTRLVRLDLSKNQIKFLPKDAKQQRETVNAASHKNNHSQQPK--SQKKEPHPKK 115 (326)
T ss_pred hhccceeeeehhhhhHHHhhccchHHHHHHHHHhccHhhHhhChhhHHHHHHHHHHHhhccchhhCCc--cccccCCcch
Confidence 4455666677777777666554 666667777777777776665 45666666667777776666554 4566777777
Q ss_pred EeccCCCCC
Q psy13376 191 LNIERNPVC 199 (417)
Q Consensus 191 L~L~~N~l~ 199 (417)
+++.+|++.
T Consensus 116 ~e~k~~~~~ 124 (326)
T KOG0473|consen 116 NEQKKTEFF 124 (326)
T ss_pred hhhccCcch
Confidence 777777654
No 74
>KOG4308|consensus
Probab=90.87 E-value=0.048 Score=56.25 Aligned_cols=130 Identities=27% Similarity=0.341 Sum_probs=90.4
Q ss_pred ccccEEEeecCCCCCCCC------cCCCcccceEeeeCCCCCCcC------CCC----CCccCceeeeeCCCCCccc---
Q psy13376 73 KLIKAVNLRIKTLRKIEN------LWMMENLVELDLSMNHIGVIE------NLD----QLVCLEKLDLGYNRIEQIQ--- 133 (417)
Q Consensus 73 ~~L~~L~Ls~N~i~~i~~------l~~l~~L~~L~Ls~N~l~~l~------~l~----~l~~L~~L~Ls~N~l~~l~--- 133 (417)
..++.|++..+.++.... +.....++.++++.|.+.... .+. ...++++|.+++|.++...
T Consensus 144 ~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~~~l~~~~~~~~~le~L~L~~~~~t~~~c~~ 223 (478)
T KOG4308|consen 144 CLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLSQALESAASPLSSLETLKLSRCGVTSSSCAL 223 (478)
T ss_pred HHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHhhhhhhhhcccccHHHHhhhhcCcChHHHHH
Confidence 345667777787776532 555778888888888875321 133 4678899999999887432
Q ss_pred ---CCccccc-cceeEeecCCCCCc------CCCCCC-CCCcEEeccCCccCcchh---hhhhhCCCCcCEEeccCCCCC
Q psy13376 134 ---GLDTLVN-LKVLNLKMNRIETI------EGLDHL-EKLELFNIAANRIQSLAS---LVYLRRFKHLGRLNIERNPVC 199 (417)
Q Consensus 134 ---~~~~l~~-L~~L~Ls~N~i~~l------~~l~~l-~~L~~L~Ls~N~i~~l~~---~~~l~~l~~L~~L~L~~N~l~ 199 (417)
.+...+. +..|++.+|++.+. +.+..+ +.+++++++.|.|++... ...+..++.++.+.++.|++.
T Consensus 224 l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 224 LDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 1445555 77799999988754 235555 678999999999886433 124556778999999999887
Q ss_pred CCC
Q psy13376 200 DKE 202 (417)
Q Consensus 200 ~~~ 202 (417)
+..
T Consensus 304 ~~~ 306 (478)
T KOG4308|consen 304 DYG 306 (478)
T ss_pred cHH
Confidence 643
No 75
>KOG1947|consensus
Probab=90.81 E-value=0.1 Score=53.29 Aligned_cols=106 Identities=22% Similarity=0.146 Sum_probs=47.9
Q ss_pred CcccceEeeeCC-CCCC--cC-CCCCCccCceeeeeCC--CCCccc-----CCccccccceeEeecCC-CCCcC--CC-C
Q psy13376 94 MENLVELDLSMN-HIGV--IE-NLDQLVCLEKLDLGYN--RIEQIQ-----GLDTLVNLKVLNLKMNR-IETIE--GL-D 158 (417)
Q Consensus 94 l~~L~~L~Ls~N-~l~~--l~-~l~~l~~L~~L~Ls~N--~l~~l~-----~~~~l~~L~~L~Ls~N~-i~~l~--~l-~ 158 (417)
++.|+.|.+.++ .++. +. ....+++|+.|+++++ .+...+ ....+++|+.|+++... +++.. .+ .
T Consensus 187 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~~ 266 (482)
T KOG1947|consen 187 CPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALAS 266 (482)
T ss_pred CchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHHh
Confidence 455555555554 2332 21 2445556666666542 111111 12334555566665554 43332 11 1
Q ss_pred CCCCCcEEeccCCc-cCcchhhhhhhCCCCcCEEeccCCCCC
Q psy13376 159 HLEKLELFNIAANR-IQSLASLVYLRRFKHLGRLNIERNPVC 199 (417)
Q Consensus 159 ~l~~L~~L~Ls~N~-i~~l~~~~~l~~l~~L~~L~L~~N~l~ 199 (417)
.+++|++|.+.++. +++..-......++.|++|+++++...
T Consensus 267 ~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~ 308 (482)
T KOG1947|consen 267 RCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGL 308 (482)
T ss_pred hCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccc
Confidence 25556666555554 444222223344555666666655443
No 76
>KOG4308|consensus
Probab=88.79 E-value=0.024 Score=58.41 Aligned_cols=153 Identities=21% Similarity=0.222 Sum_probs=98.7
Q ss_pred cccccEEEeecCCCCCCC------CcCCC-cccceEeeeCCCCCCcC------CCCCCccCceeeeeCCCCCccc-----
Q psy13376 72 YKLIKAVNLRIKTLRKIE------NLWMM-ENLVELDLSMNHIGVIE------NLDQLVCLEKLDLGYNRIEQIQ----- 133 (417)
Q Consensus 72 l~~L~~L~Ls~N~i~~i~------~l~~l-~~L~~L~Ls~N~l~~l~------~l~~l~~L~~L~Ls~N~l~~l~----- 133 (417)
..+|..|++++|.+.... .+... ..+++|++..|.++... .+.....++.++++.|.+....
T Consensus 114 ~~~L~~L~l~~n~l~~~g~~~l~~~l~~~~~~l~~L~l~~c~l~~~g~~~l~~~L~~~~~l~~l~l~~n~l~~~g~~~l~ 193 (478)
T KOG4308|consen 114 LPTLGQLDLSGNNLGDEGARLLCEGLRLPQCLLQTLELVSCSLTSEGAAPLAAVLEKNEHLTELDLSLNGLIELGLLVLS 193 (478)
T ss_pred cccHhHhhcccCCCccHhHHHHHhhcccchHHHHHHHhhcccccccchHHHHHHHhcccchhHHHHHhcccchhhhHHHh
Confidence 667788888888887432 13333 56777888888777543 2556778888888888874221
Q ss_pred -CC----ccccccceeEeecCCCCCcC------CCCCCCC-CcEEeccCCccCcchh---hhhhhCC-CCcCEEeccCCC
Q psy13376 134 -GL----DTLVNLKVLNLKMNRIETIE------GLDHLEK-LELFNIAANRIQSLAS---LVYLRRF-KHLGRLNIERNP 197 (417)
Q Consensus 134 -~~----~~l~~L~~L~Ls~N~i~~l~------~l~~l~~-L~~L~Ls~N~i~~l~~---~~~l~~l-~~L~~L~L~~N~ 197 (417)
.+ ....++++|.++++.++... .+...+. +..+++..|.+.+... ...+..+ +.++.++++.|+
T Consensus 194 ~~l~~~~~~~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~ns 273 (478)
T KOG4308|consen 194 QALESAASPLSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNS 273 (478)
T ss_pred hhhhhhhcccccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCC
Confidence 12 24567888888888877442 2455555 6668888888876421 1233444 567888999998
Q ss_pred CCCCCCcc-HHHHhcCCCcccccCcccC
Q psy13376 198 VCDKENVD-GFAIAMVPQLQCYNNHIIL 224 (417)
Q Consensus 198 l~~~~~~~-~~~~~~l~~L~~Ld~~~~~ 224 (417)
|+....-. ...+..+++++.+.++..+
T Consensus 274 i~~~~~~~L~~~l~~~~~l~~l~l~~n~ 301 (478)
T KOG4308|consen 274 ITEKGVRDLAEVLVSCRQLEELSLSNNP 301 (478)
T ss_pred ccccchHHHHHHHhhhHHHHHhhcccCc
Confidence 88754421 1245566777777766655
No 77
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=88.05 E-value=0.38 Score=27.99 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=9.6
Q ss_pred ccCceeeeeCCCCCccc
Q psy13376 117 VCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 117 ~~L~~L~Ls~N~l~~l~ 133 (417)
++|++|+|++|+|+.+|
T Consensus 2 ~~L~~L~L~~N~l~~lp 18 (26)
T smart00370 2 PNLRELDLSNNQLSSLP 18 (26)
T ss_pred CCCCEEECCCCcCCcCC
Confidence 45555555555555555
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=88.05 E-value=0.38 Score=27.99 Aligned_cols=17 Identities=29% Similarity=0.487 Sum_probs=9.6
Q ss_pred ccCceeeeeCCCCCccc
Q psy13376 117 VCLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 117 ~~L~~L~Ls~N~l~~l~ 133 (417)
++|++|+|++|+|+.+|
T Consensus 2 ~~L~~L~L~~N~l~~lp 18 (26)
T smart00369 2 PNLRELDLSNNQLSSLP 18 (26)
T ss_pred CCCCEEECCCCcCCcCC
Confidence 45555555555555555
No 79
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=87.49 E-value=0.45 Score=28.03 Aligned_cols=16 Identities=50% Similarity=0.777 Sum_probs=7.5
Q ss_pred cCceeeeeCCCCCccc
Q psy13376 118 CLEKLDLGYNRIEQIQ 133 (417)
Q Consensus 118 ~L~~L~Ls~N~l~~l~ 133 (417)
+|+.|++++|+|+.++
T Consensus 3 ~L~~L~L~~NkI~~IE 18 (26)
T smart00365 3 NLEELDLSQNKIKKIE 18 (26)
T ss_pred ccCEEECCCCccceec
Confidence 4444444444444443
No 80
>KOG1947|consensus
Probab=86.22 E-value=0.6 Score=47.60 Aligned_cols=110 Identities=18% Similarity=0.132 Sum_probs=77.2
Q ss_pred CCCccCceeeeeCCC-CCc--ccC-CccccccceeEeecC--CCCCcC-----CCCCCCCCcEEeccCCc-cCcchhhhh
Q psy13376 114 DQLVCLEKLDLGYNR-IEQ--IQG-LDTLVNLKVLNLKMN--RIETIE-----GLDHLEKLELFNIAANR-IQSLASLVY 181 (417)
Q Consensus 114 ~~l~~L~~L~Ls~N~-l~~--l~~-~~~l~~L~~L~Ls~N--~i~~l~-----~l~~l~~L~~L~Ls~N~-i~~l~~~~~ 181 (417)
..++.|+.|.+..+. +.. +.. ...++.|+.|+++++ .+...+ ....+++|+.|+++++. +++.. +..
T Consensus 185 ~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~-l~~ 263 (482)
T KOG1947|consen 185 SSCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIG-LSA 263 (482)
T ss_pred hhCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchh-HHH
Confidence 347888888888773 444 323 667889999999873 222222 24556899999999998 66643 344
Q ss_pred hh-CCCCcCEEeccCCC-CCCCCCccHHHHhcCCCcccccCcccCHH
Q psy13376 182 LR-RFKHLGRLNIERNP-VCDKENVDGFAIAMVPQLQCYNNHIILED 226 (417)
Q Consensus 182 l~-~l~~L~~L~L~~N~-l~~~~~~~~~~~~~l~~L~~Ld~~~~~~~ 226 (417)
+. .+++|+.|.+.++. +++..- ..+...++.|+.|+++.|...
T Consensus 264 l~~~c~~L~~L~l~~c~~lt~~gl--~~i~~~~~~L~~L~l~~c~~~ 308 (482)
T KOG1947|consen 264 LASRCPNLETLSLSNCSNLTDEGL--VSIAERCPSLRELDLSGCHGL 308 (482)
T ss_pred HHhhCCCcceEccCCCCccchhHH--HHHHHhcCcccEEeeecCccc
Confidence 44 48999999988777 555433 346677999999999988753
No 81
>KOG3763|consensus
Probab=86.00 E-value=0.4 Score=49.35 Aligned_cols=85 Identities=27% Similarity=0.316 Sum_probs=56.6
Q ss_pred CCCccCceeeeeCCCCCcccCC----ccccccceeEeecC--CCCCcCCCCC--CCCCcEEeccCCccCcchh--hhhh-
Q psy13376 114 DQLVCLEKLDLGYNRIEQIQGL----DTLVNLKVLNLKMN--RIETIEGLDH--LEKLELFNIAANRIQSLAS--LVYL- 182 (417)
Q Consensus 114 ~~l~~L~~L~Ls~N~l~~l~~~----~~l~~L~~L~Ls~N--~i~~l~~l~~--l~~L~~L~Ls~N~i~~l~~--~~~l- 182 (417)
.+.+.+..++|++|++..+..+ ...|+|..|+|++| .+...+.+.. ...|+.|.+.+|.+.+--. -.++
T Consensus 215 ~n~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~~~~el~K~k~l~Leel~l~GNPlc~tf~~~s~yv~ 294 (585)
T KOG3763|consen 215 ENFPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKISSESELDKLKGLPLEELVLEGNPLCTTFSDRSEYVS 294 (585)
T ss_pred cCCcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhcchhhhhhhcCCCHHHeeecCCccccchhhhHHHHH
Confidence 3667788889999999888753 35689999999999 5554433322 2358999999999865211 0122
Q ss_pred ---hCCCCcCEEeccCCCCCC
Q psy13376 183 ---RRFKHLGRLNIERNPVCD 200 (417)
Q Consensus 183 ---~~l~~L~~L~L~~N~l~~ 200 (417)
..+|+|..|| |..+..
T Consensus 295 ~i~~~FPKL~~LD--G~ev~~ 313 (585)
T KOG3763|consen 295 AIRELFPKLLRLD--GVEVQP 313 (585)
T ss_pred HHHHhcchheeec--CcccCc
Confidence 2678887665 554433
No 82
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=85.67 E-value=0.62 Score=27.06 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=9.7
Q ss_pred CCCcEEeccCCccCcchh
Q psy13376 161 EKLELFNIAANRIQSLAS 178 (417)
Q Consensus 161 ~~L~~L~Ls~N~i~~l~~ 178 (417)
++|++|++++|+|+.+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~ 19 (26)
T smart00370 2 PNLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCCEEECCCCcCCcCCH
Confidence 445555555555555544
No 83
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=85.67 E-value=0.62 Score=27.06 Aligned_cols=18 Identities=22% Similarity=0.462 Sum_probs=9.7
Q ss_pred CCCcEEeccCCccCcchh
Q psy13376 161 EKLELFNIAANRIQSLAS 178 (417)
Q Consensus 161 ~~L~~L~Ls~N~i~~l~~ 178 (417)
++|++|++++|+|+.+|.
T Consensus 2 ~~L~~L~L~~N~l~~lp~ 19 (26)
T smart00369 2 PNLRELDLSNNQLSSLPP 19 (26)
T ss_pred CCCCEEECCCCcCCcCCH
Confidence 445555555555555544
No 84
>KOG3864|consensus
Probab=85.09 E-value=0.61 Score=42.11 Aligned_cols=81 Identities=14% Similarity=0.134 Sum_probs=41.6
Q ss_pred ccceeEeecCCCCCc--CCCCCCCCCcEEeccCCc-cCcchhhhhhh-CCCCcCEEeccCCCCCCCCCccHHHHhcCCCc
Q psy13376 140 NLKVLNLKMNRIETI--EGLDHLEKLELFNIAANR-IQSLASLVYLR-RFKHLGRLNIERNPVCDKENVDGFAIAMVPQL 215 (417)
Q Consensus 140 ~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~Ls~N~-i~~l~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 215 (417)
.++.++.++..|... ..+.+++.++.|.+.++. +.++ .+..+. -.++|+.|++++|+-.+... ...+..+++|
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~-~L~~l~~~~~~L~~L~lsgC~rIT~~G--L~~L~~lknL 178 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDW-CLERLGGLAPSLQDLDLSGCPRITDGG--LACLLKLKNL 178 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhH-HHHHhcccccchheeeccCCCeechhH--HHHHHHhhhh
Confidence 355566665555443 245556666666666653 3332 222222 34667777777765332222 2345566666
Q ss_pred ccccCccc
Q psy13376 216 QCYNNHII 223 (417)
Q Consensus 216 ~~Ld~~~~ 223 (417)
+.|.+...
T Consensus 179 r~L~l~~l 186 (221)
T KOG3864|consen 179 RRLHLYDL 186 (221)
T ss_pred HHHHhcCc
Confidence 66655443
No 85
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=84.84 E-value=0.72 Score=27.18 Aligned_cols=19 Identities=68% Similarity=0.777 Sum_probs=13.2
Q ss_pred cccceEeeeCCCCCCcCCC
Q psy13376 95 ENLVELDLSMNHIGVIENL 113 (417)
Q Consensus 95 ~~L~~L~Ls~N~l~~l~~l 113 (417)
++|+.|++++|+|+.++++
T Consensus 2 ~~L~~L~L~~NkI~~IEnL 20 (26)
T smart00365 2 TNLEELDLSQNKIKKIENL 20 (26)
T ss_pred CccCEEECCCCccceecCc
Confidence 5677777777777766554
No 86
>KOG3864|consensus
Probab=83.75 E-value=0.22 Score=44.86 Aligned_cols=81 Identities=25% Similarity=0.295 Sum_probs=53.0
Q ss_pred cCceeeeeCCCCCcc--cCCccccccceeEeecCCC-CCc--CCC-CCCCCCcEEeccCC-ccCcchhhhhhhCCCCcCE
Q psy13376 118 CLEKLDLGYNRIEQI--QGLDTLVNLKVLNLKMNRI-ETI--EGL-DHLEKLELFNIAAN-RIQSLASLVYLRRFKHLGR 190 (417)
Q Consensus 118 ~L~~L~Ls~N~l~~l--~~~~~l~~L~~L~Ls~N~i-~~l--~~l-~~l~~L~~L~Ls~N-~i~~l~~~~~l~~l~~L~~ 190 (417)
.++.+|-++..|... ..+..++.++.|.+.++.- .+. ..+ ...++|+.|++++| +|++- ++..+..+++|+.
T Consensus 102 ~IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~ck~~dD~~L~~l~~~~~~L~~L~lsgC~rIT~~-GL~~L~~lknLr~ 180 (221)
T KOG3864|consen 102 KIEAVDASDSSIMYEGLEHLRDLRSIKSLSLANCKYFDDWCLERLGGLAPSLQDLDLSGCPRITDG-GLACLLKLKNLRR 180 (221)
T ss_pred eEEEEecCCchHHHHHHHHHhccchhhhheeccccchhhHHHHHhcccccchheeeccCCCeechh-HHHHHHHhhhhHH
Confidence 567777777776533 3466777777777766642 111 111 14578999999988 67774 4567788889988
Q ss_pred EeccCCCCC
Q psy13376 191 LNIERNPVC 199 (417)
Q Consensus 191 L~L~~N~l~ 199 (417)
|.+.+=+..
T Consensus 181 L~l~~l~~v 189 (221)
T KOG3864|consen 181 LHLYDLPYV 189 (221)
T ss_pred HHhcCchhh
Confidence 888664433
No 87
>KOG4341|consensus
Probab=80.94 E-value=1.2 Score=44.54 Aligned_cols=160 Identities=13% Similarity=0.020 Sum_probs=90.9
Q ss_pred cccccEEEeecC-CCCCCCC---cCCCcccceEeeeCCC-CCCcC--C-CCCCccCceeeeeCCC-CCccc--C-Ccccc
Q psy13376 72 YKLIKAVNLRIK-TLRKIEN---LWMMENLVELDLSMNH-IGVIE--N-LDQLVCLEKLDLGYNR-IEQIQ--G-LDTLV 139 (417)
Q Consensus 72 l~~L~~L~Ls~N-~i~~i~~---l~~l~~L~~L~Ls~N~-l~~l~--~-l~~l~~L~~L~Ls~N~-l~~l~--~-~~~l~ 139 (417)
...+..+++.++ .+++.+. -..+..|+.|+.+++. +++.. . -.+.++|+.|-++.++ ++... . -.+++
T Consensus 267 ~~~i~~lnl~~c~~lTD~~~~~i~~~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~ 346 (483)
T KOG4341|consen 267 CLEILKLNLQHCNQLTDEDLWLIACGCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCP 346 (483)
T ss_pred ChHhhccchhhhccccchHHHHHhhhhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCCh
Confidence 344555555453 3443332 2345677777777663 33221 2 3456778888887775 33322 1 24566
Q ss_pred ccceeEeecCCCCCcC----CCCCCCCCcEEeccCCccCcchhhhhh----hCCCCcCEEeccCCCCCCCCCccHHHHhc
Q psy13376 140 NLKVLNLKMNRIETIE----GLDHLEKLELFNIAANRIQSLASLVYL----RRFKHLGRLNIERNPVCDKENVDGFAIAM 211 (417)
Q Consensus 140 ~L~~L~Ls~N~i~~l~----~l~~l~~L~~L~Ls~N~i~~l~~~~~l----~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 211 (417)
.|+.+++.......-. .-.+++.|+.|.++++....-.++..+ ..+..|..+.|+++|...... ...+..
T Consensus 347 ~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i~d~~--Le~l~~ 424 (483)
T KOG4341|consen 347 HLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLITDAT--LEHLSI 424 (483)
T ss_pred hhhhhcccccceehhhhHhhhccCCchhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCchHHH--HHHHhh
Confidence 7888887776543221 234677788888887753322222222 345667778888887765443 334566
Q ss_pred CCCcccccCcccCHHHHHHHHH
Q psy13376 212 VPQLQCYNNHIILEDERRTALE 233 (417)
Q Consensus 212 l~~L~~Ld~~~~~~~~~~~~~~ 233 (417)
+++|+.+++-.|....++....
T Consensus 425 c~~Leri~l~~~q~vtk~~i~~ 446 (483)
T KOG4341|consen 425 CRNLERIELIDCQDVTKEAISR 446 (483)
T ss_pred CcccceeeeechhhhhhhhhHH
Confidence 7788877777776655544443
No 88
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=77.86 E-value=1.4 Score=25.96 Aligned_cols=17 Identities=18% Similarity=0.462 Sum_probs=9.0
Q ss_pred cCceeeeeCCCCCcccC
Q psy13376 118 CLEKLDLGYNRIEQIQG 134 (417)
Q Consensus 118 ~L~~L~Ls~N~l~~l~~ 134 (417)
+|++|++++|+++++|.
T Consensus 3 ~L~~L~vs~N~Lt~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLTSLPE 19 (26)
T ss_pred ccceeecCCCccccCcc
Confidence 45555555555555554
No 89
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=72.55 E-value=1.8 Score=24.54 Aligned_cols=16 Identities=25% Similarity=0.443 Sum_probs=9.0
Q ss_pred CCCCcEEeccCCccCc
Q psy13376 160 LEKLELFNIAANRIQS 175 (417)
Q Consensus 160 l~~L~~L~Ls~N~i~~ 175 (417)
+++|++|++++|+|++
T Consensus 1 ~~~L~~L~l~~n~i~~ 16 (24)
T PF13516_consen 1 NPNLETLDLSNNQITD 16 (24)
T ss_dssp -TT-SEEE-TSSBEHH
T ss_pred CCCCCEEEccCCcCCH
Confidence 3567777777777665
No 90
>smart00446 LRRcap occurring C-terminal to leucine-rich repeats. A motif occurring C-terminal to leucine-rich repeats in "sds22-like" and "typical" LRR-containing proteins.
Probab=66.09 E-value=3.6 Score=24.24 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=18.0
Q ss_pred CCccHHHHhcCCCcccccCcc
Q psy13376 202 ENVDGFAIAMVPQLQCYNNHI 222 (417)
Q Consensus 202 ~~~~~~~~~~l~~L~~Ld~~~ 222 (417)
+.|+.+++..+|+|+.||...
T Consensus 2 ~~YR~~Vi~~LPqL~~LD~~~ 22 (26)
T smart00446 2 AHYREKVIRLLPQLRKLDXXX 22 (26)
T ss_pred ccHHHHHHHHCCccceecccc
Confidence 458889999999999999754
No 91
>KOG4341|consensus
Probab=65.22 E-value=7.8 Score=38.92 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=69.3
Q ss_pred CCccCceeeeeCCCC-Cccc--C-CccccccceeEeecCC-CCCcC--C-CCCCCCCcEEeccCCccCcchhhh-hhhCC
Q psy13376 115 QLVCLEKLDLGYNRI-EQIQ--G-LDTLVNLKVLNLKMNR-IETIE--G-LDHLEKLELFNIAANRIQSLASLV-YLRRF 185 (417)
Q Consensus 115 ~l~~L~~L~Ls~N~l-~~l~--~-~~~l~~L~~L~Ls~N~-i~~l~--~-l~~l~~L~~L~Ls~N~i~~l~~~~-~l~~l 185 (417)
++..|+.|+.+++.- ++.+ . -.+.++|+.|-++.++ ++... . -.+++.|+.+++..+.......+. .-.++
T Consensus 292 ~c~~lq~l~~s~~t~~~d~~l~aLg~~~~~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C 371 (483)
T KOG4341|consen 292 GCHALQVLCYSSCTDITDEVLWALGQHCHNLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNC 371 (483)
T ss_pred hhhHhhhhcccCCCCCchHHHHHHhcCCCceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCC
Confidence 567889998877653 3322 1 3466889999998876 33332 1 246778999999888644322221 22578
Q ss_pred CCcCEEeccCCCCCCCCCccHH--HHhcCCCcccccCcccCHH
Q psy13376 186 KHLGRLNIERNPVCDKENVDGF--AIAMVPQLQCYNNHIILED 226 (417)
Q Consensus 186 ~~L~~L~L~~N~l~~~~~~~~~--~~~~l~~L~~Ld~~~~~~~ 226 (417)
+.|+.+.++++........+.. .......|..+.+..++..
T Consensus 372 ~~lr~lslshce~itD~gi~~l~~~~c~~~~l~~lEL~n~p~i 414 (483)
T KOG4341|consen 372 PRLRVLSLSHCELITDEGIRHLSSSSCSLEGLEVLELDNCPLI 414 (483)
T ss_pred chhccCChhhhhhhhhhhhhhhhhccccccccceeeecCCCCc
Confidence 8999999998765544322211 1234566777777776653
No 92
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=56.87 E-value=7.5 Score=23.06 Aligned_cols=15 Identities=13% Similarity=0.397 Sum_probs=9.4
Q ss_pred CCCcEEeccCCccCc
Q psy13376 161 EKLELFNIAANRIQS 175 (417)
Q Consensus 161 ~~L~~L~Ls~N~i~~ 175 (417)
++|++|+|++|.|.+
T Consensus 2 ~~L~~LdL~~N~i~~ 16 (28)
T smart00368 2 PSLRELDLSNNKLGD 16 (28)
T ss_pred CccCEEECCCCCCCH
Confidence 356666666666654
No 93
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=47.74 E-value=13 Score=45.69 Aligned_cols=29 Identities=28% Similarity=0.378 Sum_probs=14.3
Q ss_pred eecCCCCCcC--CCCCCCCCcEEeccCCccC
Q psy13376 146 LKMNRIETIE--GLDHLEKLELFNIAANRIQ 174 (417)
Q Consensus 146 Ls~N~i~~l~--~l~~l~~L~~L~Ls~N~i~ 174 (417)
|++|+|+.++ .|..+++|+.|+|++|.+.
T Consensus 2 LSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 2 ISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 4455555554 2444555555555555444
No 94
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=26.57 E-value=40 Score=41.89 Aligned_cols=30 Identities=40% Similarity=0.520 Sum_probs=25.8
Q ss_pred eeeCCCCCCcCC--CCCCccCceeeeeCCCCC
Q psy13376 101 DLSMNHIGVIEN--LDQLVCLEKLDLGYNRIE 130 (417)
Q Consensus 101 ~Ls~N~l~~l~~--l~~l~~L~~L~Ls~N~l~ 130 (417)
||++|+|+.++. |..+++|+.|+|++|.+.
T Consensus 1 DLSnN~LstLp~g~F~~L~sL~~LdLsgNPw~ 32 (2740)
T TIGR00864 1 DISNNKISTIEEGICANLCNLSEIDLSGNPFE 32 (2740)
T ss_pred CCCCCcCCccChHHhccCCCceEEEeeCCccc
Confidence 578999998874 888999999999999875
Done!