BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13378
(272 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D113|DNLZ_MOUSE DNL-type zinc finger protein OS=Mus musculus GN=Dnlz PE=2 SV=1
Length = 177
Score = 94.7 bits (234), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 108 GVIKLKHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLK 167
G ++ H +L YTCKVCGTR+S ISK +Y +GVVIV C GC N+H+IADNL WF+DLK
Sbjct: 66 GRVEADH-YQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLSWFSDLK 124
Query: 168 PGVTNIEHILAEKGEQ 183
G NIE ILA +GE+
Sbjct: 125 -GKRNIEEILAARGEE 139
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Query: 221 HHLIADNLKWFSDLKPGVTNIEHILAEKGEQVRRIDSNGAIELI 264
HH+IADNL WFSDLK G NIE ILA +GE+VRR+ +GA+ELI
Sbjct: 110 HHIIADNLSWFSDLK-GKRNIEEILAARGEEVRRVSGDGALELI 152
>sp|Q0IH40|DNLZ_XENLA DNL-type zinc finger protein OS=Xenopus laevis GN=dnlz PE=2 SV=1
Length = 188
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 117 KLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTNIEHI 176
+L YTCKVC TR+S ISK +Y KGVVIV+C GC N+H+IADNL WF+DL+ G NIE I
Sbjct: 83 RLIYTCKVCATRSSKTISKVAYHKGVVIVRCPGCENHHIIADNLGWFSDLE-GRRNIEEI 141
Query: 177 LAEKGEQ 183
LA KGEQ
Sbjct: 142 LAAKGEQ 148
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Query: 221 HHLIADNLKWFSDLKPGVTNIEHILAEKGEQVRRIDSNGAIELI 264
HH+IADNL WFSDL+ G NIE ILA KGEQV+R+ + A+E++
Sbjct: 119 HHIIADNLGWFSDLE-GRRNIEEILAAKGEQVQRLVGDDAVEIL 161
>sp|Q5SXM8|DNLZ_HUMAN DNL-type zinc finger protein OS=Homo sapiens GN=DNLZ PE=2 SV=1
Length = 178
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/76 (59%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 108 GVIKLKHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLK 167
G ++ H +L YTCKVCGTR+S ISK +Y +GVVIV C GC N+H+IADNL WF+DL
Sbjct: 62 GRVEAAH-YQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLN 120
Query: 168 PGVTNIEHILAEKGEQ 183
G NIE IL +GEQ
Sbjct: 121 -GKRNIEEILTARGEQ 135
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 221 HHLIADNLKWFSDLKPGVTNIEHILAEKGEQVRRIDSNGAIELI 264
HH+IADNL WFSDL G NIE IL +GEQV R+ GA+EL+
Sbjct: 106 HHIIADNLGWFSDLN-GKRNIEEILTARGEQVHRVAGEGALELV 148
>sp|A1L1P7|DNLZ_DANRE DNL-type zinc finger protein OS=Danio rerio GN=dnlz PE=2 SV=1
Length = 183
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 118 LAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTNIEHIL 177
L YTCKVC TR+ ISK +Y KGVVIV C GC N+H+IADNLKWF+DL+ G NIE IL
Sbjct: 83 LVYTCKVCSTRSMKKISKLAYHKGVVIVTCPGCKNHHVIADNLKWFSDLE-GKRNIEEIL 141
Query: 178 AEKGE 182
A KGE
Sbjct: 142 AAKGE 146
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%), Gaps = 1/49 (2%)
Query: 221 HHLIADNLKWFSDLKPGVTNIEHILAEKGEQVRRIDSNGAIELIEDEKK 269
HH+IADNLKWFSDL+ G NIE ILA KGE VRR++ + A+E++ +E +
Sbjct: 118 HHVIADNLKWFSDLE-GKRNIEEILAAKGESVRRVEGSEALEIVNEESR 165
>sp|P42844|ZIM17_YEAST Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ZIM17 PE=1
SV=2
Length = 174
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 113 KHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTN 172
K K+ +A+TCK C TR+SH +SK +YEKG V++ C C HLIAD+LK F D
Sbjct: 66 KPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHH---VT 122
Query: 173 IEHILAEKGEQ 183
+E ++ GEQ
Sbjct: 123 VEQLMKANGEQ 133
>sp|A6ZSH0|ZIM17_YEAS7 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain YJM789) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 113 KHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTN 172
K K+ +A+TCK C TR+SH +SK +YEKG V++ C C HLIAD+LK F D
Sbjct: 66 KPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHH---VT 122
Query: 173 IEHILAEKGEQ 183
+E ++ GEQ
Sbjct: 123 VEQLMKANGEQ 133
>sp|B5VQB0|ZIM17_YEAS6 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 113 KHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTN 172
K K+ +A+TCK C TR+SH +SK +YEKG V++ C C HLIAD+LK F D
Sbjct: 66 KPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHH---VT 122
Query: 173 IEHILAEKGEQ 183
+E ++ GEQ
Sbjct: 123 VEQLMKANGEQ 133
>sp|B3LPE4|ZIM17_YEAS1 Mitochondrial protein import protein ZIM17 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=ZIM17 PE=3 SV=2
Length = 174
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 3/71 (4%)
Query: 113 KHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTN 172
K K+ +A+TCK C TR+SH +SK +YEKG V++ C C HLIAD+LK F D
Sbjct: 66 KPKMMIAFTCKKCNTRSSHTMSKQAYEKGTVLISCPHCKVRHLIADHLKIFHDHH---VT 122
Query: 173 IEHILAEKGEQ 183
+E ++ GEQ
Sbjct: 123 VEQLMKANGEQ 133
>sp|Q09759|YA72_SCHPO Uncharacterized protein C24H6.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC24H6.02c PE=4 SV=1
Length = 175
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 110 IKLKHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPG 169
++ K +++TC VC TR++H SK +Y G V+V+C C N HL+AD+LK F++ +
Sbjct: 70 LQPKPTYNVSFTCTVCNTRSNHNFSKQAYHNGTVLVQCPKCKNRHLMADHLKIFSEER-- 127
Query: 170 VTNIEHILAEKGEQGCKG 187
IE ILA+KGE KG
Sbjct: 128 -VTIEDILAKKGETFKKG 144
>sp|O15060|ZBT39_HUMAN Zinc finger and BTB domain-containing protein 39 OS=Homo sapiens
GN=ZBTB39 PE=2 SV=1
Length = 712
Score = 35.8 bits (81), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 31/105 (29%)
Query: 48 YGLSHSELKKR-----ANLLKFYTRNSTPGNPEPIQLEHKLKLAYTCKVCGTRNSHLISK 102
+GL H L+KR L + PGN + Y+CKVCG R +H S+
Sbjct: 572 FGLQHPALQKRKLPAEEFLGEELALQGQPGNSK-----------YSCKVCGKRFAH-TSE 619
Query: 103 HSYEKGVIKLKHKLKLAYTCKVCGTRNSHLISKHSYEKGVVIVKC 147
+Y + + H + Y CKVC H + +G +KC
Sbjct: 620 FNYHRRI----HTGEKPYQCKVC----------HKFFRGRSTIKC 650
>sp|Q9H4T2|ZSC16_HUMAN Zinc finger and SCAN domain-containing protein 16 OS=Homo sapiens
GN=ZSCAN16 PE=1 SV=2
Length = 348
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 78 QLEHKLKLAYTCKVCGTRNSHL--ISKHSYEKGVIKLKHKLKLAYTCKVCGT---RNSHL 132
+ + + + Y C CG SH +SKH + H + Y C CG + SHL
Sbjct: 227 EWQQRERRRYKCDECGKSFSHSSDLSKH-------RRTHTGEKPYKCDECGKAFIQRSHL 279
Query: 133 ISKHSYEKGVVIVKCEGCSNN 153
I H GV KC+ C +
Sbjct: 280 IGHHRVHTGVKPYKCKECGKD 300
>sp|Q54FG5|GACJJ_DICDI Rho GTPase-activating protein gacJJ OS=Dictyostelium discoideum
GN=gacJJ PE=3 SV=1
Length = 873
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 148 EGCSNNHLIADNLKWFTDLKPGVTNIEHILAEKGEQGCKGLFCLSHDIKLNTNIVRLMIE 207
+G +LI D K +DL V+ + + CK LF +I LN+NI L I+
Sbjct: 184 DGKQTMNLIVDITKPLSDLMDLVSCKFKL---RSTSDCK-LFTYGKEINLNSNIKNLNID 239
Query: 208 TCLCHLIRETHGSHHLIADNLKW 230
T L ++R+ + + L ++++W
Sbjct: 240 TSLPFILRDNNDPNSLSLESIQW 262
>sp|Q61116|ZN235_MOUSE Zinc finger protein 235 OS=Mus musculus GN=Znf235 PE=2 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 81 HKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCGTRNSH---LISKHS 137
H + Y C+VCG R +S HS++ H K Y C CG SH L + HS
Sbjct: 475 HTGEKPYRCEVCGKRFPWSLSLHSHQS-----VHTGKKPYKCGECGKGFSHASSLQAHHS 529
Query: 138 YEKGVVIVKCEGCSNNHLIADNLK 161
G KC C NL+
Sbjct: 530 VHTGEKPFKCNVCQKQFSKTSNLQ 553
>sp|P57071|PRD15_HUMAN PR domain zinc finger protein 15 OS=Homo sapiens GN=PRDM15 PE=2
SV=4
Length = 1507
Score = 34.3 bits (77), Expect = 0.87, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 95 RNSHLISKHSYEKGVIKLKHKLKLAYTCKVCGT--RNSHLISKHSYEKGVVIVKCEGCS 151
R+ L S+H + +IK + K Y C +C +NS +S+H G + KCE C+
Sbjct: 713 RSLILSSRHGIRRKLIKQLGEHKRVYQCNICSKIFQNSSNLSRHVRSHGDKLFKCEECA 771
Score = 32.0 bits (71), Expect = 5.3, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 19/82 (23%)
Query: 64 FYTRNSTPGNPEPIQLEHKLKLAYTCKVCGTR--NSHLISKHSYEKGVIKLKHKLKLAYT 121
F RN+ E +L H + +TC VC + +++ KH ++L H A +
Sbjct: 1177 FSERNTM----ETHKLIHTVGKQWTCSVCDKKYVTEYMLQKH------VQLTHDKVEAQS 1226
Query: 122 CKVCGTRNS-------HLISKH 136
C++CGT+ S H+ KH
Sbjct: 1227 CQLCGTKVSTRASMSRHMRRKH 1248
>sp|Q76KX8|ZN534_HUMAN Zinc finger protein 534 OS=Homo sapiens GN=ZNF534 PE=2 SV=1
Length = 674
Score = 34.3 bits (77), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 18/102 (17%)
Query: 81 HKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLIS 134
H + Y+C CG +RNSHL + G + ++C CG +RNSHL
Sbjct: 557 HTGEKPYSCNECGKVFSRNSHLARHRNIHTG--------EKPHSCNECGKVFSRNSHLAR 608
Query: 135 KHSYEKGVVIVKCEGC----SNNHLIADNLKWFTDLKPGVTN 172
G + KC C S N +A + T +KP N
Sbjct: 609 HRKIHTGEKLYKCNECSKVFSRNSRLAQHRNIHTGVKPYSCN 650
>sp|Q9NYT6|ZN226_HUMAN Zinc finger protein 226 OS=Homo sapiens GN=ZNF226 PE=1 SV=2
Length = 803
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Query: 81 HKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLISKHS 137
H + Y C+ CG S+ S+ + +L H + + C CG +RNSHL S
Sbjct: 357 HTAEKPYNCEECGR----AFSQASHLQDHQRL-HTGEKPFKCDACGKSFSRNSHLQSHQR 411
Query: 138 YEKGVVIVKCEGCSNNHLIADNL 160
G KCE C + + NL
Sbjct: 412 VHTGEKPYKCEECGKGFICSSNL 434
>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2
Length = 913
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 8/87 (9%)
Query: 78 QLEHKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLIS 134
Q H + Y C+ CG S++SY +G ++ H + Y C+ CG +R+SHL
Sbjct: 572 QRVHTGEKPYKCEECGKG----FSRNSYLQGHQRV-HTGEKPYKCEECGKGFSRSSHLQG 626
Query: 135 KHSYEKGVVIVKCEGCSNNHLIADNLK 161
G KCE C + NL+
Sbjct: 627 HQRVHTGEKPFKCEECGKGFSWSFNLQ 653
>sp|Q9NZL3|ZN224_HUMAN Zinc finger protein 224 OS=Homo sapiens GN=ZNF224 PE=1 SV=3
Length = 707
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 50/131 (38%), Gaps = 21/131 (16%)
Query: 39 FSVSKLCYDYGLSHSELK--KRANLLKFYTRNSTPGNPEPIQLEHKLKLAYTCKVCGTRN 96
F + CY + SHS K K K Y R + + KL Y CK CG
Sbjct: 409 FYTNSQCYSHQRSHSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKL---YNCKECGK-- 463
Query: 97 SHLISKHSYEKGVIKLKHKL----KLAYTCKVCG---TRNSHLISKHSYEKGVVIVKCEG 149
S+ + LKH+ + + C+ CG T+NSHL S G KCE
Sbjct: 464 -------SFSRAPCLLKHERLHSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPYKCEK 516
Query: 150 CSNNHLIADNL 160
C + NL
Sbjct: 517 CGKGYNSKFNL 527
>sp|P17141|ZFP37_MOUSE Zinc finger protein 37 OS=Mus musculus GN=Zfp37 PE=2 SV=4
Length = 594
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 22/153 (14%)
Query: 28 PNLNILIVENEFSVSKLCYD---YGLSHSELKKRANLLKFYTRNSTPGNPEPIQLEHKLK 84
PN + ++ SK C + SH++ K K + TP PE K
Sbjct: 196 PNNKLSDKGDKNQTSKKCEKVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGSGK-- 253
Query: 85 LAYTCKVCGTRNSHLISKHSYEKGVI--KLKHKLKLAYTCKVCG---TRNSHLISKHSYE 139
Y C CG SH ++G++ + H + Y C CG ++ SHL+
Sbjct: 254 -PYECNHCGKVLSH-------KQGLLDHQRTHTGEKPYECNECGIAFSQKSHLVVHQRTH 305
Query: 140 KGVVIVKCEGC----SNNHLIADNLKWFTDLKP 168
G +CE C + H + D+L+ T KP
Sbjct: 306 TGEKPYECEQCGKAHGHKHALTDHLRIHTGEKP 338
>sp|Q14586|ZN267_HUMAN Zinc finger protein 267 OS=Homo sapiens GN=ZNF267 PE=2 SV=3
Length = 743
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 12/85 (14%)
Query: 81 HKLKLAYTCKVCGT--RNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLISK 135
H + Y CK CG R S ++KH K H + Y CK CG R+S L
Sbjct: 402 HTGEKPYKCKECGKAFRCSSYLTKH-------KRIHTGEKPYKCKECGKAFNRSSCLTQH 454
Query: 136 HSYEKGVVIVKCEGCSNNHLIADNL 160
+ G + KC+ CS ++ + NL
Sbjct: 455 QTTHTGEKLYKCKVCSKSYARSSNL 479
>sp|P0CG31|Z286B_HUMAN Putative zinc finger protein 286B OS=Homo sapiens GN=ZNF286B PE=5
SV=1
Length = 522
Score = 32.0 bits (71), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 25/151 (16%)
Query: 15 LNIDADPDSVIYHPNLN---ILIVENEFSVSKLCYDYGLSHSELKKRANLLKFYTRNSTP 71
L+ + D + +Y + N +LI E+ V K Y + LK+++NL+K
Sbjct: 184 LSEETDHEHDVYWKSFNQKSVLITEDR--VPKGSYAFHTLEKSLKQKSNLMK-------- 233
Query: 72 GNPEPIQLEHKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCGTRNSH 131
Q +K K + C CG L + HS ++ H + YTC CG SH
Sbjct: 234 -----KQRTYKEKKPHKCNDCGE----LFTCHSVHIQHQRV-HTGEKPYTCNECGKSFSH 283
Query: 132 L--ISKHSYEKGVVIVKCEGCSNNHLIADNL 160
++KH ++ +C C + +L
Sbjct: 284 RANLTKHQRTHTRILFECRECKKTFTESSSL 314
>sp|A6NK53|ZN233_HUMAN Zinc finger protein 233 OS=Homo sapiens GN=ZNF233 PE=2 SV=3
Length = 670
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 14/99 (14%)
Query: 69 STPGNPEPIQLEHKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVC 125
S N + Q H + Y C VC +RNSHL + G + Y C C
Sbjct: 462 SKASNLQAHQRIHTGEKPYKCDVCDKNFSRNSHLQAHQRVHTG--------EKPYKCDTC 513
Query: 126 G---TRNSHLISKHSYEKGVVIVKCEGCSNNHLIADNLK 161
G ++ SHL + KG KCE C + +L+
Sbjct: 514 GKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQ 552
>sp|P51815|ZN75D_HUMAN Zinc finger protein 75D OS=Homo sapiens GN=ZNF75D PE=2 SV=2
Length = 510
Score = 31.6 bits (70), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 86 AYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCGTR---NSHLISKHSYEKGV 142
Y C CG SH + H++++ H + + C CG R NSHLI G
Sbjct: 420 PYRCSWCGKSFSHNTNLHTHQR-----IHTGEKPFKCDECGKRFIQNSHLIKHQRTHTGE 474
Query: 143 VIVKCEGCSNN 153
C C N
Sbjct: 475 QPYTCSLCKRN 485
>sp|Q49A33|Z876P_HUMAN Putative zinc finger protein 876 OS=Homo sapiens GN=ZNF876P PE=5
SV=3
Length = 203
Score = 31.6 bits (70), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 16/86 (18%)
Query: 73 NPEPI--QLEHKLKLAYTCKVCGT---RNSHLISKHSYEKGVIKLKHKLKLAYTCKVCGT 127
NP P+ + H + YTC+ CG R+SHL + G + +Y C+ CG
Sbjct: 47 NPHPLINKRIHTGEKPYTCEECGKAFYRSSHLTEHKNIHTG--------EKSYKCEECGN 98
Query: 128 ---RNSHLISKHSYEKGVVIVKCEGC 150
R+SHL G KCE C
Sbjct: 99 AFYRSSHLTKHKRIHSGQKPYKCEEC 124
>sp|Q9HBT8|Z286A_HUMAN Zinc finger protein 286A OS=Homo sapiens GN=ZNF286A PE=2 SV=1
Length = 521
Score = 31.6 bits (70), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 29/153 (18%)
Query: 15 LNIDADPDSVIYHPNLN---ILIVENEFSVSKLCYDYGLSHSELKKRANLLKFYTRNSTP 71
L+ + D +Y + N +LI E+ V K Y + LK+++NL+K
Sbjct: 183 LSEETDHKHDVYWKSFNQKSVLITEDR--VPKGSYAFHTLEKSLKQKSNLMK-------- 232
Query: 72 GNPEPIQLEHKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLK--HKLKLAYTCKVCGTRN 129
Q +K K + C CG L + HS +I+ + H + YTC CG
Sbjct: 233 -----KQRTYKEKKPHKCNDCGE----LFTYHSV---LIRHQRVHTGEKPYTCNECGKSF 280
Query: 130 SHL--ISKHSYEKGVVIVKCEGCSNNHLIADNL 160
SH ++KH ++ +C C + +L
Sbjct: 281 SHRANLTKHQRTHTRILFECSECKKTFTESSSL 313
>sp|Q6PDB4|ZN880_HUMAN Zinc finger protein 880 OS=Homo sapiens GN=ZNF880 PE=2 SV=2
Length = 577
Score = 31.2 bits (69), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 14/79 (17%)
Query: 78 QLEHKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSH 131
Q H + Y C CG T+NSHL + H G + Y C CG RN+H
Sbjct: 259 QRIHTGEKPYKCHECGKVFTQNSHLANHHRIHTG--------EKPYKCNECGKVFNRNAH 310
Query: 132 LISKHSYEKGVVIVKCEGC 150
L G KC+ C
Sbjct: 311 LARHQKIHSGEKPYKCKEC 329
>sp|Q3URR7|ZSC10_MOUSE Zinc finger and SCAN domain-containing protein 10 OS=Mus musculus
GN=Zscan10 PE=1 SV=2
Length = 782
Score = 31.2 bits (69), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query: 86 AYTCKVCGT--RNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLISKHSYEK 140
Y C CG R S + H+ + H + ++C+VCG T+NS LIS
Sbjct: 523 PYVCSDCGKAFRQSEQLMIHT------RRVHTRERPFSCQVCGRCFTQNSQLISHQQIHT 576
Query: 141 GVVIVKCEGCS 151
G C CS
Sbjct: 577 GEKPHACPQCS 587
>sp|Q5R8G9|ZN239_PONAB Zinc finger protein 239 OS=Pongo abelii GN=ZNF239 PE=2 SV=1
Length = 458
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 78 QLEHKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSH 131
Q +H + Y C+ CG TR+S L+ + + H + Y C CG TR+S
Sbjct: 226 QRDHTEEKPYKCEQCGKGFTRSSSLL--------IHQAVHTDEKPYKCDKCGKGFTRSSS 277
Query: 132 LISKHSYEKGVVIVKCEGC 150
L+ H+ G KC+ C
Sbjct: 278 LLIHHAVHTGEKPYKCDKC 296
>sp|Q8TAQ5|ZN420_HUMAN Zinc finger protein 420 OS=Homo sapiens GN=ZNF420 PE=2 SV=1
Length = 688
Score = 31.2 bits (69), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 81 HKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLIS 134
H + Y CK CG +R+S L + + H + Y CK CG T++S LI
Sbjct: 161 HTGEKPYECKQCGKAFSRDSQL--------SLHQRLHTGEKPYACKECGKAFTQSSQLIL 212
Query: 135 KHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTNIE 174
H G KCE C + + L + G E
Sbjct: 213 HHRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKPYE 252
>sp|Q16600|ZN239_HUMAN Zinc finger protein 239 OS=Homo sapiens GN=ZNF239 PE=2 SV=3
Length = 458
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 78 QLEHKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSH 131
Q +H + Y C+ CG TR+S L+ + + H + Y C CG TR+S
Sbjct: 226 QRDHTEEKPYKCEQCGKGFTRSSSLL--------IHQAVHTDEKPYKCDKCGKGFTRSSS 277
Query: 132 LISKHSYEKGVVIVKCEGC 150
L+ H+ G KC+ C
Sbjct: 278 LLIHHAVHTGEKPYKCDKC 296
>sp|A2VDQ7|ZN420_BOVIN Zinc finger protein 420 OS=Bos taurus GN=ZNF420 PE=2 SV=1
Length = 687
Score = 31.2 bits (69), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 14/100 (14%)
Query: 81 HKLKLAYTCKVCG---TRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLIS 134
H + Y CK CG +R+S L + + H + Y CK CG T++S LI
Sbjct: 160 HTGEKPYECKQCGKAFSRDSQL--------SLHQRLHTGEKPYACKECGKAFTQSSQLIL 211
Query: 135 KHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPGVTNIE 174
H G KCE C + + L + G E
Sbjct: 212 HHRIHTGEKPYKCEECGKAFIRSSQLTRHQKVHTGEKPYE 251
>sp|Q14590|ZN235_HUMAN Zinc finger protein 235 OS=Homo sapiens GN=ZNF235 PE=2 SV=3
Length = 738
Score = 31.2 bits (69), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 78 QLEHKLKLAYTCKVCGTRNSHLISKHSYEKGVIKLKHKLKLAYTCKVCG---TRNSHLIS 134
Q H + Y C+VCG R + ++ H++++ H + Y C+ CG ++ S+L +
Sbjct: 534 QRVHTGEKPYKCEVCGKRFNWSLNLHNHQR-----VHTGEKPYKCEECGKGFSQASNLQA 588
Query: 135 KHSYEKGVVIVKCEGCSNNHLIADNLKWFTDLKPG 169
S G KC+ C A +L+ + G
Sbjct: 589 HQSVHTGEKPFKCDACQKRFSQASHLQAHQRVHTG 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,359,455
Number of Sequences: 539616
Number of extensions: 4466661
Number of successful extensions: 11067
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 10808
Number of HSP's gapped (non-prelim): 364
length of query: 272
length of database: 191,569,459
effective HSP length: 116
effective length of query: 156
effective length of database: 128,974,003
effective search space: 20119944468
effective search space used: 20119944468
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)