Query psy13379
Match_columns 828
No_of_seqs 246 out of 940
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 17:59:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13379.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13379hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t6p_A Baculoviral IAP repeat- 99.9 5.9E-25 2E-29 236.3 0.0 74 340-420 2-75 (345)
2 2qfa_A Baculoviral IAP repeat- 99.9 6.6E-25 2.3E-29 210.3 -2.8 90 382-487 51-140 (142)
3 1i4o_C X-linked IAP, baculovir 99.9 1.4E-23 4.8E-28 201.3 6.1 87 337-431 37-123 (141)
4 3siq_A Apoptosis 1 inhibitor; 99.9 1.6E-23 5.4E-28 199.6 4.8 86 338-431 31-116 (136)
5 1se0_A Apoptosis 1 inhibitor; 99.9 1.9E-23 6.6E-28 194.6 5.1 86 338-431 9-94 (116)
6 2poi_A Baculoviral IAP repeat- 99.9 6.5E-23 2.2E-27 184.7 4.6 75 339-420 16-90 (94)
7 3m1d_A Baculoviral IAP repeat- 99.9 4.5E-23 1.5E-27 182.6 1.5 74 340-420 8-81 (85)
8 2qra_D XIAP, baculoviral IAP r 99.9 1.9E-22 6.5E-27 186.6 4.3 76 338-420 32-107 (111)
9 3hl5_A Baculoviral IAP repeat- 99.8 1E-22 3.5E-27 183.5 1.8 75 337-420 7-81 (95)
10 2vm5_A Baculoviral IAP repeat- 99.8 1.7E-22 5.7E-27 185.6 2.8 78 337-420 14-91 (106)
11 1jd5_A DIAP1, apoptosis 1 inhi 99.8 2.6E-22 9E-27 188.9 2.7 78 336-420 18-95 (124)
12 2i3h_A Baculoviral IAP repeat- 99.8 3.2E-22 1.1E-26 190.2 2.8 78 336-420 40-117 (133)
13 3d9t_A Baculoviral IAP repeat- 99.8 4.6E-22 1.6E-26 179.8 2.6 74 340-420 10-83 (97)
14 3mup_A Baculoviral IAP repeat- 99.8 1E-21 3.5E-26 184.4 3.0 76 338-420 14-89 (122)
15 1g73_C Inhibitors of apoptosis 99.8 1.3E-21 4.5E-26 183.4 2.7 75 337-420 21-95 (121)
16 3m1d_A Baculoviral IAP repeat- 99.8 4.4E-20 1.5E-24 163.5 3.2 74 235-321 3-81 (85)
17 2poi_A Baculoviral IAP repeat- 99.8 1.3E-19 4.4E-24 163.3 5.3 73 237-322 14-91 (94)
18 1i4o_C X-linked IAP, baculovir 99.8 1.2E-19 4.2E-24 174.0 5.0 82 233-328 33-119 (141)
19 2qra_D XIAP, baculoviral IAP r 99.8 3.3E-19 1.1E-23 165.1 5.2 73 237-322 31-108 (111)
20 1se0_A Apoptosis 1 inhibitor; 99.8 4.4E-19 1.5E-23 165.3 5.3 79 237-329 8-91 (116)
21 3siq_A Apoptosis 1 inhibitor; 99.7 4.9E-19 1.7E-23 168.8 5.2 78 238-329 31-113 (136)
22 2vm5_A Baculoviral IAP repeat- 99.7 3.3E-19 1.1E-23 163.7 3.9 77 233-321 10-91 (106)
23 3hl5_A Baculoviral IAP repeat- 99.7 5.7E-19 2E-23 159.1 4.8 73 234-321 4-81 (95)
24 2i3h_A Baculoviral IAP repeat- 99.7 7.5E-19 2.6E-23 167.2 4.8 75 234-321 38-117 (133)
25 1jd5_A DIAP1, apoptosis 1 inhi 99.7 8.4E-19 2.9E-23 165.1 5.0 76 233-321 15-95 (124)
26 3d9t_A Baculoviral IAP repeat- 99.7 1.2E-18 4.2E-23 157.4 4.4 73 236-321 6-83 (97)
27 3mup_A Baculoviral IAP repeat- 99.7 2E-18 6.8E-23 162.2 4.8 73 236-321 12-89 (122)
28 1g73_C Inhibitors of apoptosis 99.7 2.4E-18 8.3E-23 161.4 4.4 74 233-321 17-95 (121)
29 3t6p_A Baculoviral IAP repeat- 99.6 2.9E-16 9.8E-21 169.1 3.9 69 240-321 2-75 (345)
30 2qfa_A Baculoviral IAP repeat- 99.5 4.9E-15 1.7E-19 142.1 -0.4 66 453-520 6-78 (142)
31 2kna_A Baculoviral IAP repeat- 95.6 0.0016 5.5E-08 59.7 -0.7 40 518-578 30-69 (104)
32 4ggc_A P55CDC, cell division c 93.8 0.15 5E-06 49.4 7.9 55 31-87 30-84 (318)
33 4e54_B DNA damage-binding prot 89.5 0.49 1.7E-05 49.6 6.6 59 29-87 122-182 (435)
34 4gga_A P55CDC, cell division c 88.5 0.97 3.3E-05 47.0 7.9 46 38-84 116-162 (420)
35 2ynn_A Coatomer subunit beta'; 88.1 0.56 1.9E-05 46.6 5.6 57 29-86 231-287 (304)
36 2ynn_A Coatomer subunit beta'; 86.9 1.4 4.7E-05 43.9 7.6 59 29-87 100-158 (304)
37 1got_B GT-beta; complex (GTP-b 86.8 1.5 5.2E-05 44.3 7.9 54 28-81 228-282 (340)
38 3lrv_A PRE-mRNA-splicing facto 86.8 1.9 6.4E-05 43.5 8.6 57 28-84 172-229 (343)
39 3mmy_A MRNA export factor; mRN 85.8 1.5 5.2E-05 42.8 7.1 58 28-87 275-333 (368)
40 4h5i_A Guanine nucleotide-exch 85.7 1.5 5.2E-05 45.2 7.5 57 29-86 272-328 (365)
41 4gqb_B Methylosome protein 50; 85.4 1.6 5.3E-05 45.2 7.3 58 29-87 130-187 (344)
42 3zwl_B Eukaryotic translation 85.4 2.3 7.8E-05 41.6 8.2 58 29-88 77-134 (369)
43 2aq5_A Coronin-1A; WD40 repeat 85.3 2 6.8E-05 44.0 8.1 59 28-87 178-237 (402)
44 3k26_A Polycomb protein EED; W 85.2 2.1 7.3E-05 41.9 7.9 58 28-85 117-177 (366)
45 3zwl_B Eukaryotic translation 84.9 2.5 8.6E-05 41.3 8.2 59 29-89 221-279 (369)
46 1vyh_C Platelet-activating fac 84.5 1.7 5.9E-05 45.4 7.3 56 29-87 111-167 (410)
47 4g56_B MGC81050 protein; prote 84.0 1.5 5.3E-05 45.0 6.6 57 29-87 272-329 (357)
48 3frx_A Guanine nucleotide-bind 83.5 4.7 0.00016 40.3 9.7 61 29-91 199-259 (319)
49 1k8k_C P40, ARP2/3 complex 41 83.3 2.9 9.9E-05 41.3 7.9 60 28-87 54-114 (372)
50 3vu4_A KMHSV2; beta-propeller 82.9 2.9 9.8E-05 42.8 8.0 55 28-82 197-253 (355)
51 3vgz_A Uncharacterized protein 82.8 4.3 0.00015 39.8 9.0 71 29-106 187-260 (353)
52 4ery_A WD repeat-containing pr 82.5 3.2 0.00011 40.7 7.9 59 29-87 195-254 (312)
53 2pm9_A Protein WEB1, protein t 82.4 2.8 9.7E-05 42.2 7.6 60 28-87 167-232 (416)
54 1gxr_A ESG1, transducin-like e 82.2 3.6 0.00012 39.7 7.9 57 29-87 186-242 (337)
55 3mmy_A MRNA export factor; mRN 82.1 3.1 0.00011 40.6 7.6 59 28-86 41-103 (368)
56 4aow_A Guanine nucleotide-bind 82.0 3.9 0.00014 39.7 8.2 54 29-85 218-271 (340)
57 3ei3_B DNA damage-binding prot 81.8 2.9 9.8E-05 42.2 7.4 60 28-87 75-136 (383)
58 3i2n_A WD repeat-containing pr 81.8 2 6.8E-05 42.0 6.1 60 28-87 20-85 (357)
59 3lrv_A PRE-mRNA-splicing facto 81.8 3.7 0.00013 41.3 8.2 58 28-86 127-186 (343)
60 1gxr_A ESG1, transducin-like e 81.6 3.9 0.00013 39.5 8.0 60 28-87 99-159 (337)
61 3f3f_A Nucleoporin SEH1; struc 81.5 4.9 0.00017 38.4 8.5 38 29-66 113-152 (351)
62 4ery_A WD repeat-containing pr 81.5 4.1 0.00014 39.9 8.2 56 29-85 152-208 (312)
63 3k26_A Polycomb protein EED; W 81.0 3.1 0.00011 40.7 7.2 59 28-87 71-133 (366)
64 1yfq_A Cell cycle arrest prote 80.8 3.2 0.00011 40.6 7.1 57 28-86 253-309 (342)
65 3vl1_A 26S proteasome regulato 80.8 4 0.00014 41.3 8.1 57 28-85 141-197 (420)
66 4gqb_B Methylosome protein 50; 80.7 2.7 9.4E-05 43.4 7.0 59 29-87 172-232 (344)
67 1r5m_A SIR4-interacting protei 80.7 4 0.00014 40.7 7.9 59 29-87 333-412 (425)
68 2aq5_A Coronin-1A; WD40 repeat 80.5 3.5 0.00012 42.2 7.6 58 29-86 134-193 (402)
69 3iz6_a 40S ribosomal protein R 80.3 3.1 0.00011 42.8 7.2 40 29-68 252-291 (380)
70 4ggc_A P55CDC, cell division c 80.0 3.6 0.00012 39.6 7.1 51 29-81 243-296 (318)
71 1pby_B Quinohemoprotein amine 80.0 5 0.00017 38.8 8.2 78 29-106 36-122 (337)
72 1k8k_C P40, ARP2/3 complex 41 79.8 3.5 0.00012 40.7 7.1 56 29-86 11-69 (372)
73 4g56_B MGC81050 protein; prote 79.7 3 0.0001 42.8 6.9 57 29-87 142-199 (357)
74 3ow8_A WD repeat-containing pr 79.6 4.2 0.00014 41.1 7.8 56 29-85 251-306 (321)
75 3vgz_A Uncharacterized protein 79.4 6.1 0.00021 38.7 8.6 58 29-89 233-291 (353)
76 1vyh_C Platelet-activating fac 79.0 4 0.00014 42.7 7.6 57 28-86 194-250 (410)
77 1sq9_A Antiviral protein SKI8; 78.9 5 0.00017 40.2 8.0 38 28-65 293-330 (397)
78 3gre_A Serine/threonine-protei 78.6 4.3 0.00015 41.8 7.5 53 28-80 216-268 (437)
79 2pbi_B Guanine nucleotide-bind 78.5 4.8 0.00016 41.1 7.9 57 29-87 157-215 (354)
80 3vl1_A 26S proteasome regulato 78.4 3 0.0001 42.3 6.3 60 28-87 249-308 (420)
81 1erj_A Transcriptional repress 78.2 4.4 0.00015 41.9 7.6 57 29-87 168-224 (393)
82 4aez_A CDC20, WD repeat-contai 78.2 5.6 0.00019 40.9 8.3 60 28-88 219-278 (401)
83 4a11_B DNA excision repair pro 78.0 3.2 0.00011 41.2 6.2 60 28-87 45-117 (408)
84 2pm9_A Protein WEB1, protein t 77.9 4.9 0.00017 40.4 7.6 60 28-88 264-324 (416)
85 3f3f_A Nucleoporin SEH1; struc 77.8 4.5 0.00015 38.6 7.0 58 28-87 13-76 (351)
86 3i2n_A WD repeat-containing pr 77.7 2.8 9.7E-05 40.9 5.7 60 28-87 211-277 (357)
87 2vdu_B TRNA (guanine-N(7)-)-me 77.6 13 0.00044 38.9 11.0 58 26-87 307-370 (450)
88 3jrp_A Fusion protein of prote 77.2 4.6 0.00016 39.7 7.0 53 28-80 103-158 (379)
89 3ow8_A WD repeat-containing pr 77.2 4.4 0.00015 40.9 7.1 51 29-81 167-218 (321)
90 1got_B GT-beta; complex (GTP-b 77.0 5.3 0.00018 40.3 7.6 52 29-82 187-239 (340)
91 1sq9_A Antiviral protein SKI8; 76.0 6.9 0.00024 39.2 8.1 39 28-66 235-276 (397)
92 3mkq_A Coatomer beta'-subunit; 75.6 5 0.00017 44.8 7.6 58 29-87 16-73 (814)
93 3ei3_B DNA damage-binding prot 75.5 6.1 0.00021 39.8 7.5 58 28-87 206-268 (383)
94 2pbi_B Guanine nucleotide-bind 75.1 6.5 0.00022 40.2 7.7 38 28-65 242-279 (354)
95 3fm0_A Protein CIAO1; WDR39,SG 74.9 5.3 0.00018 40.5 6.9 55 28-82 152-207 (345)
96 4aez_A CDC20, WD repeat-contai 74.7 5.9 0.0002 40.7 7.4 59 28-86 305-366 (401)
97 3odt_A Protein DOA1; ubiquitin 74.5 6.8 0.00023 37.4 7.3 57 29-87 21-77 (313)
98 1l0q_A Surface layer protein; 74.1 9.2 0.00031 38.4 8.4 58 29-88 34-92 (391)
99 1erj_A Transcriptional repress 73.8 7.3 0.00025 40.2 7.8 57 29-86 126-182 (393)
100 4e54_B DNA damage-binding prot 73.7 12 0.0004 39.2 9.4 57 29-85 167-225 (435)
101 2xzm_R RACK1; ribosome, transl 73.5 8.9 0.00031 38.6 8.2 56 29-85 79-134 (343)
102 3dw8_B Serine/threonine-protei 73.3 9.5 0.00032 38.9 8.4 33 28-60 228-261 (447)
103 3dw8_B Serine/threonine-protei 72.8 12 0.0004 38.2 8.9 35 28-62 344-378 (447)
104 3dwl_C Actin-related protein 2 72.6 6.8 0.00023 39.1 7.0 30 27-56 147-176 (377)
105 2vdu_B TRNA (guanine-N(7)-)-me 72.5 5.7 0.00019 41.6 6.7 57 29-87 198-257 (450)
106 3iz6_a 40S ribosomal protein R 72.5 5.3 0.00018 41.0 6.4 55 29-84 69-123 (380)
107 4a11_B DNA excision repair pro 72.1 4.9 0.00017 39.9 5.8 52 28-81 101-153 (408)
108 3mkq_A Coatomer beta'-subunit; 72.0 4.7 0.00016 45.0 6.2 57 29-86 231-287 (814)
109 3gre_A Serine/threonine-protei 72.0 5.8 0.0002 40.7 6.5 58 29-86 66-128 (437)
110 3odt_A Protein DOA1; ubiquitin 71.9 14 0.00049 35.2 8.8 53 29-85 228-281 (313)
111 3jrp_A Fusion protein of prote 71.4 7.8 0.00027 38.0 7.0 57 29-87 14-74 (379)
112 3fm0_A Protein CIAO1; WDR39,SG 70.9 8.8 0.0003 38.8 7.5 57 28-84 63-120 (345)
113 3frx_A Guanine nucleotide-bind 70.6 9.5 0.00032 38.1 7.6 53 29-82 68-120 (319)
114 1yfq_A Cell cycle arrest prote 70.0 9.1 0.00031 37.3 7.1 56 29-86 14-74 (342)
115 1jmx_B Amine dehydrogenase; ox 68.6 12 0.0004 36.5 7.6 55 34-88 7-61 (349)
116 4aow_A Guanine nucleotide-bind 68.6 12 0.0004 36.4 7.5 59 29-87 41-103 (340)
117 1pgu_A Actin interacting prote 68.5 9.2 0.00032 40.6 7.3 58 28-87 208-269 (615)
118 2xyi_A Probable histone-bindin 67.5 10 0.00036 39.6 7.4 58 29-87 234-295 (430)
119 4h5i_A Guanine nucleotide-exch 67.5 23 0.00079 36.4 9.9 56 28-85 135-192 (365)
120 3dwl_C Actin-related protein 2 66.7 4.7 0.00016 40.3 4.4 57 29-85 14-71 (377)
121 4gga_A P55CDC, cell division c 66.7 11 0.00038 39.0 7.3 51 29-81 323-376 (420)
122 1pgu_A Actin interacting prote 66.7 12 0.00042 39.6 7.8 52 28-79 490-541 (615)
123 1r5m_A SIR4-interacting protei 65.4 18 0.00061 36.0 8.3 55 29-85 292-346 (425)
124 1l0q_A Surface layer protein; 65.3 17 0.00059 36.4 8.2 60 28-89 75-135 (391)
125 3bws_A Protein LP49; two-domai 65.1 14 0.00047 37.7 7.5 60 28-89 304-364 (433)
126 3fvz_A Peptidyl-glycine alpha- 63.9 17 0.00059 36.6 8.0 60 29-90 198-259 (329)
127 3sfz_A APAF-1, apoptotic pepti 63.3 14 0.00046 44.0 8.0 52 29-81 660-711 (1249)
128 3v7d_B Cell division control p 63.2 17 0.00059 37.6 7.9 55 30-87 395-449 (464)
129 3bws_A Protein LP49; two-domai 63.0 22 0.00076 36.1 8.6 61 28-89 171-231 (433)
130 1pby_B Quinohemoprotein amine 62.7 14 0.00046 35.8 6.6 50 40-89 3-53 (337)
131 1jmx_B Amine dehydrogenase; ox 62.1 18 0.00062 35.2 7.5 61 29-89 45-111 (349)
132 1nr0_A Actin interacting prote 61.8 17 0.00057 40.2 8.0 54 29-82 193-252 (611)
133 1ri6_A Putative isomerase YBHE 61.7 27 0.00091 33.8 8.6 60 29-88 131-196 (343)
134 2oit_A Nucleoporin 214KDA; NH2 60.7 13 0.00045 39.8 6.7 57 28-85 151-208 (434)
135 3bg1_A Protein SEC13 homolog; 60.4 9.8 0.00034 38.0 5.3 32 29-60 16-47 (316)
136 1ri6_A Putative isomerase YBHE 60.2 22 0.00076 34.3 7.7 61 29-89 40-103 (343)
137 1pjx_A Dfpase, DIISOPROPYLFLUO 60.0 27 0.00092 33.8 8.3 61 29-90 228-288 (314)
138 3dsm_A Uncharacterized protein 59.4 25 0.00084 35.7 8.2 60 29-89 174-244 (328)
139 1nir_A Nitrite reductase; hemo 59.2 22 0.00074 39.5 8.3 72 30-101 424-516 (543)
140 2xyi_A Probable histone-bindin 59.0 17 0.00059 37.9 7.1 60 28-88 279-340 (430)
141 2ymu_A WD-40 repeat protein; u 58.6 16 0.00055 38.8 6.9 54 29-86 19-73 (577)
142 3v7d_B Cell division control p 57.6 21 0.00071 36.9 7.4 38 29-66 313-350 (464)
143 3dm0_A Maltose-binding peripla 57.3 21 0.00072 39.8 7.9 37 29-65 564-600 (694)
144 3vu4_A KMHSV2; beta-propeller 57.3 20 0.00069 36.5 7.2 34 27-60 241-274 (355)
145 3u4y_A Uncharacterized protein 57.0 33 0.0011 33.5 8.3 59 29-89 178-240 (331)
146 2oiz_A Aromatic amine dehydrog 56.6 37 0.0013 35.1 9.1 63 32-106 259-332 (361)
147 3dm0_A Maltose-binding peripla 56.1 22 0.00074 39.8 7.7 56 29-85 433-488 (694)
148 2hes_X YDR267CP; beta-propelle 56.0 24 0.00084 35.3 7.4 51 28-80 155-208 (330)
149 4gq1_A NUP37; propeller, trans 55.8 29 0.00098 35.9 8.1 58 29-87 318-377 (393)
150 2pm7_B Protein transport prote 54.5 21 0.00073 35.1 6.6 57 29-87 12-72 (297)
151 2ojh_A Uncharacterized protein 54.1 31 0.0011 32.1 7.3 59 29-88 44-103 (297)
152 1nr0_A Actin interacting prote 53.7 21 0.00073 39.3 7.1 52 29-80 494-547 (611)
153 2pm7_B Protein transport prote 53.5 26 0.0009 34.4 7.1 52 29-80 102-156 (297)
154 3sfz_A APAF-1, apoptotic pepti 52.9 26 0.0009 41.5 8.1 56 29-85 618-673 (1249)
155 2xzm_R RACK1; ribosome, transl 52.5 42 0.0014 33.6 8.5 51 29-81 216-267 (343)
156 2j04_B YDR362CP, TAU91; beta p 52.2 23 0.00078 39.4 7.1 56 29-87 269-328 (524)
157 1q7f_A NHL, brain tumor CG1071 51.2 64 0.0022 31.0 9.3 61 29-90 166-226 (286)
158 2ovr_B FBW7, F-BOX/WD repeat p 50.9 30 0.001 35.8 7.3 34 29-64 365-398 (445)
159 3jro_A Fusion protein of prote 50.4 22 0.00075 40.7 6.7 52 29-80 12-64 (753)
160 2ymu_A WD-40 repeat protein; u 50.2 56 0.0019 34.6 9.4 55 29-86 60-115 (577)
161 3no2_A Uncharacterized protein 50.1 29 0.001 34.8 6.9 49 39-88 6-54 (276)
162 2hes_X YDR267CP; beta-propelle 49.9 35 0.0012 34.2 7.4 28 29-56 110-137 (330)
163 3bg1_A Protein SEC13 homolog; 49.2 32 0.0011 34.2 7.0 30 29-58 215-248 (316)
164 2oaj_A Protein SNI1; WD40 repe 48.4 33 0.0011 40.6 7.9 55 29-86 61-115 (902)
165 4gq1_A NUP37; propeller, trans 48.3 21 0.00072 36.9 5.7 58 29-87 139-204 (393)
166 3u4y_A Uncharacterized protein 47.5 48 0.0017 32.3 7.8 55 31-87 44-101 (331)
167 3jro_A Fusion protein of prote 46.6 32 0.0011 39.4 7.2 52 29-80 56-110 (753)
168 2oaj_A Protein SNI1; WD40 repe 46.3 31 0.0011 40.8 7.3 50 28-79 19-68 (902)
169 3q7m_A Lipoprotein YFGL, BAMB; 45.6 41 0.0014 34.1 7.2 50 39-88 54-110 (376)
170 1nir_A Nitrite reductase; hemo 44.9 56 0.0019 36.2 8.7 39 28-66 223-266 (543)
171 3qqz_A Putative uncharacterize 44.9 70 0.0024 32.8 8.8 62 28-91 28-90 (255)
172 2dg1_A DRP35, lactonase; beta 43.6 61 0.0021 31.8 7.9 71 30-105 48-118 (333)
173 2ojh_A Uncharacterized protein 43.6 34 0.0012 31.8 5.8 60 28-87 218-289 (297)
174 2j04_B YDR362CP, TAU91; beta p 42.9 32 0.0011 38.3 6.4 51 29-80 358-408 (524)
175 3qqz_A Putative uncharacterize 42.3 59 0.002 33.4 7.8 65 26-92 172-245 (255)
176 2xzh_A Clathrin heavy chain 1; 41.9 39 0.0013 37.2 6.6 36 35-70 268-303 (365)
177 3dsm_A Uncharacterized protein 41.3 81 0.0028 31.8 8.6 58 29-88 227-285 (328)
178 3scy_A Hypothetical bacterial 40.8 70 0.0024 31.9 7.9 61 29-89 213-278 (361)
179 1q7f_A NHL, brain tumor CG1071 40.6 80 0.0027 30.3 8.1 61 29-90 123-183 (286)
180 3e5z_A Putative gluconolactona 39.7 66 0.0023 31.3 7.4 57 29-89 30-87 (296)
181 3fvz_A Peptidyl-glycine alpha- 39.6 74 0.0025 31.9 8.0 62 28-90 25-110 (329)
182 1pjx_A Dfpase, DIISOPROPYLFLUO 39.5 77 0.0026 30.5 7.8 60 29-89 20-90 (314)
183 2w18_A PALB2, fancn, partner a 38.4 57 0.002 35.6 7.3 56 31-87 183-243 (356)
184 1bpo_A Protein (clathrin); cla 38.1 56 0.0019 37.3 7.3 37 34-70 266-302 (494)
185 2j04_A TAU60, YPL007P, hypothe 38.0 55 0.0019 38.0 7.4 53 29-81 132-194 (588)
186 2z3z_A Dipeptidyl aminopeptida 37.3 71 0.0024 35.3 8.0 57 28-88 83-139 (706)
187 3hfq_A Uncharacterized protein 37.2 48 0.0017 32.8 6.1 59 29-88 42-104 (347)
188 2iwa_A Glutamine cyclotransfer 37.1 99 0.0034 32.0 8.5 58 29-89 23-83 (266)
189 3g4e_A Regucalcin; six bladed 36.8 74 0.0025 31.4 7.3 61 29-90 201-262 (297)
190 4gq2_M Nucleoporin NUP120; bet 36.5 59 0.002 39.2 7.7 39 29-67 238-276 (950)
191 2oiz_A Aromatic amine dehydrog 35.5 95 0.0032 32.0 8.2 71 31-107 54-139 (361)
192 1yiq_A Quinohemoprotein alcoho 35.4 42 0.0014 38.6 6.0 50 37-87 485-534 (689)
193 2qc5_A Streptogramin B lactona 34.9 1.5E+02 0.0051 28.0 8.8 60 28-89 63-122 (300)
194 2w18_A PALB2, fancn, partner a 34.6 53 0.0018 35.8 6.3 37 44-81 301-338 (356)
195 2z2n_A Virginiamycin B lyase; 34.4 1.5E+02 0.0051 28.0 8.8 58 29-89 185-243 (299)
196 1p22_A F-BOX/WD-repeat protein 34.3 64 0.0022 33.4 6.6 25 39-63 184-208 (435)
197 2auk_A DNA-directed RNA polyme 33.8 71 0.0024 31.7 6.5 68 41-109 34-103 (190)
198 3q7m_A Lipoprotein YFGL, BAMB; 33.2 39 0.0013 34.3 4.7 48 39-88 319-366 (376)
199 3mbr_X Glutamine cyclotransfer 32.7 86 0.003 32.2 7.2 44 46-89 168-223 (243)
200 3no2_A Uncharacterized protein 31.0 2E+02 0.0069 28.6 9.5 58 28-89 38-95 (276)
201 2ece_A 462AA long hypothetical 30.4 85 0.0029 35.4 7.2 58 31-89 192-272 (462)
202 3scy_A Hypothetical bacterial 30.2 2.1E+02 0.007 28.5 9.4 60 30-89 262-325 (361)
203 2iwa_A Glutamine cyclotransfer 29.9 2E+02 0.007 29.6 9.5 91 29-121 154-261 (266)
204 2oit_A Nucleoporin 214KDA; NH2 29.9 78 0.0027 33.8 6.6 36 28-64 194-229 (434)
205 2ad6_A Methanol dehydrogenase 29.7 47 0.0016 37.3 5.1 48 38-86 475-522 (571)
206 2ovr_B FBW7, F-BOX/WD repeat p 29.5 86 0.0029 32.4 6.6 27 39-65 330-356 (445)
207 3e5z_A Putative gluconolactona 28.2 1.7E+02 0.0057 28.4 8.1 57 29-90 220-277 (296)
208 1p22_A F-BOX/WD-repeat protein 28.0 1.3E+02 0.0043 31.2 7.6 32 34-65 139-170 (435)
209 2dg1_A DRP35, lactonase; beta 27.8 1.7E+02 0.0059 28.6 8.2 61 29-90 235-300 (333)
210 3nol_A Glutamine cyclotransfer 27.6 79 0.0027 33.0 6.0 44 46-89 190-244 (262)
211 1kb0_A Quinohemoprotein alcoho 27.6 68 0.0023 36.8 6.0 47 39-86 489-535 (677)
212 1xfd_A DIP, dipeptidyl aminope 27.5 53 0.0018 36.2 4.9 64 24-88 14-79 (723)
213 3c75_H MADH, methylamine dehyd 27.1 99 0.0034 34.0 6.9 74 31-110 122-211 (426)
214 3hfq_A Uncharacterized protein 27.0 1.9E+02 0.0065 28.5 8.4 61 29-89 242-305 (347)
215 2hz6_A Endoplasmic reticulum t 26.8 85 0.0029 32.7 6.1 44 39-85 174-217 (369)
216 3mbr_X Glutamine cyclotransfer 26.6 1.8E+02 0.0063 29.8 8.4 56 29-88 23-81 (243)
217 2hqs_A Protein TOLB; TOLB, PAL 26.5 1.6E+02 0.0055 30.8 8.2 58 29-88 181-241 (415)
218 1kv9_A Type II quinohemoprotei 24.6 64 0.0022 36.9 5.0 57 38-95 469-525 (668)
219 2z2n_A Virginiamycin B lyase; 24.1 2E+02 0.007 27.1 7.7 59 29-89 143-201 (299)
220 1flg_A Protein (quinoprotein e 24.0 79 0.0027 35.7 5.5 48 39-87 498-545 (582)
221 3nok_A Glutaminyl cyclase; bet 23.7 1.5E+02 0.0052 31.0 7.2 43 46-88 199-253 (268)
222 3hrp_A Uncharacterized protein 23.4 2.2E+02 0.0075 30.2 8.6 63 28-90 220-287 (409)
223 1w6s_A Methanol dehydrogenase 23.4 81 0.0028 36.0 5.5 49 38-87 484-532 (599)
224 2qc5_A Streptogramin B lactona 22.9 2.2E+02 0.0076 26.8 7.7 61 28-90 147-207 (300)
225 1z68_A Fibroblast activation p 22.4 1.9E+02 0.0064 32.1 8.1 57 29-87 62-127 (719)
226 3nok_A Glutaminyl cyclase; bet 21.6 1.2E+02 0.004 31.9 5.8 43 44-90 112-154 (268)
227 2ecf_A Dipeptidyl peptidase IV 21.6 2E+02 0.0067 31.9 8.0 38 29-66 39-82 (741)
228 3sjl_D Methylamine dehydrogena 21.2 1.8E+02 0.0063 31.6 7.5 74 31-110 82-171 (386)
229 2p9w_A MAL S 1 allergenic prot 20.9 2.3E+02 0.008 30.6 8.1 29 29-57 187-215 (334)
230 1xfd_A DIP, dipeptidyl aminope 20.5 1.9E+02 0.0065 31.8 7.6 32 29-60 63-103 (723)
231 2qe8_A Uncharacterized protein 20.5 3E+02 0.01 27.8 8.6 74 28-106 68-152 (343)
232 2fp8_A Strictosidine synthase; 20.2 2.8E+02 0.0096 27.5 8.2 62 28-90 20-100 (322)
233 1ijq_A LDL receptor, low-densi 20.0 2.7E+02 0.0094 28.1 8.2 48 41-90 3-50 (316)
No 1
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.89 E-value=5.9e-25 Score=236.35 Aligned_cols=74 Identities=34% Similarity=0.732 Sum_probs=68.8
Q ss_pred CCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCccc
Q psy13379 340 ITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPFVK 419 (828)
Q Consensus 340 ~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~Fvk 419 (828)
.|.++++|++||.+||+. ..++|++||+|||||+| .+|+|+||+|++.|.+|+++||||+||+||+|+|+|++
T Consensus 2 ~m~~~~~Rl~tF~~WP~~----~~~~~~~lA~AGFyy~g---~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~ 74 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSS----VPVQPEQLASAGFYYVG---RNDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLI 74 (345)
T ss_dssp TTSSHHHHHHHGGGSCTT----CSSCHHHHHHTTEEECS---STTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCccHHHHHHHHhhCCCc----ccCCHHHHHhCCCeecC---CCCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHH
Confidence 578899999999999975 36899999999999995 38999999999999999999999999999999999997
Q ss_pred c
Q psy13379 420 G 420 (828)
Q Consensus 420 ~ 420 (828)
.
T Consensus 75 ~ 75 (345)
T 3t6p_A 75 R 75 (345)
T ss_dssp H
T ss_pred H
Confidence 5
No 2
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.88 E-value=6.6e-25 Score=210.31 Aligned_cols=90 Identities=22% Similarity=0.322 Sum_probs=61.2
Q ss_pred CCCeEEeeccCCcccCcCCCCCchhhccccCCCCCcccccccccccccccccCCcccccccCCCCCcccccCCCCCCCcc
Q psy13379 382 GDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPFVKGEYTQNVPLSVTYATAPALAMTHALNPDSTLVDITTLPGYIP 461 (828)
Q Consensus 382 G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~Fvk~~~~~Nvplsit~aT~Pa~~~sdpise~i~~~s~p~~P~y~s 461 (828)
..|.|+||+|++.|.+|+++||||.||++|+|+|+|++.....+. +.+..-..... ....+.++.|
T Consensus 51 ~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~C~F~~~~k~~~~-~t~~~~l~l~~-----------~~~~~~~~~~-- 116 (142)
T 2qfa_A 51 EPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGCAFLSVKKQFEE-LTLGEFLKLDR-----------ERAKNKIAKE-- 116 (142)
T ss_dssp BTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCGGGGCCSCGGG-CBHHHHHHHHH-----------HHHHHHHHHH--
T ss_pred CCCEEEcCCCCCEecccCCCCCHHHHHHHHCcCCcceecccccch-hhHHHHhhhhh-----------HHHHHHHHHH--
Confidence 379999999999999999999999999999999999986332111 00000000000 0001122333
Q ss_pred cccccceeEeecccccccCCchhhee
Q psy13379 462 LISRDSTVLVLNYIRQLKTLPRCLAI 487 (828)
Q Consensus 462 ~eaRLsSF~~W~wp~~Lk~spe~LA~ 487 (828)
.++|+.+|.+ ||..++..+++||+
T Consensus 117 ~~~r~~~F~~--~p~~~~~~~~~la~ 140 (142)
T 2qfa_A 117 TNNKKKEFEE--TAKKVRRAIEQLAA 140 (142)
T ss_dssp HHHHHHHHHH--HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH--HHHHHHHhHHHHhc
Confidence 3899999985 68878888988886
No 3
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.88 E-value=1.4e-23 Score=201.27 Aligned_cols=87 Identities=33% Similarity=0.545 Sum_probs=79.0
Q ss_pred cccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCC
Q psy13379 337 VIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCP 416 (828)
Q Consensus 337 ~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~ 416 (828)
....|.++++|++||.+||+. ..+++++||+|||||+| .+|+|+||+|++.|.+|+++||||+||+||+|+|+
T Consensus 37 ~~~~m~~e~~Rl~TF~~WP~~----~~~~p~~LA~AGFyY~g---~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~ 109 (141)
T 1i4o_C 37 RNPAMYSEEARLKSFQNWPDY----AHLTPRELASAGLYYTG---IGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCF 109 (141)
T ss_pred CChhhhCHHHHHHHHhcCCCC----ccCCHHHHHHcCCcCcC---CCCEEEeccCCCEecCCCCCCCHHHHHHHHCcCCc
Confidence 344688999999999999985 35789999999999995 38999999999999999999999999999999999
Q ss_pred ccccccccccccccc
Q psy13379 417 FVKGEYTQNVPLSVT 431 (828)
Q Consensus 417 Fvk~~~~~Nvplsit 431 (828)
|+++..+ |+|++.+
T Consensus 110 Fv~~~~~-nvp~~~~ 123 (141)
T 1i4o_C 110 FVLGRNL-NIRSESD 123 (141)
T ss_pred ccCcccc-CCCcccc
Confidence 9999888 9998765
No 4
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.88 E-value=1.6e-23 Score=199.65 Aligned_cols=86 Identities=34% Similarity=0.688 Sum_probs=78.8
Q ss_pred ccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCc
Q psy13379 338 IGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPF 417 (828)
Q Consensus 338 ~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~F 417 (828)
..+|..+++|++||.+||+. .+++++||+|||||+| .+|+|+||+|+++|.+|+++||||+||+||+|+|+|
T Consensus 31 ~~dy~~e~~RL~TF~~WP~~-----~~~p~~LA~AGFYYtG---~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~F 102 (136)
T 3siq_A 31 MNDLNREETRLKTFTDWPLD-----WLDKRQLAQTGMYFTH---AGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPL 102 (136)
T ss_dssp CCCTTBHHHHHHTTTTCCCT-----TSCHHHHHHTTEEECS---STTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCTT
T ss_pred HHhhhCHHHHHHHHccCCCC-----cCCHHHHHHCCCeEcC---CCCeEEEeccCCEecCCCCCCCHHHHHHHHCcCCcc
Confidence 34688999999999999985 4789999999999995 489999999999999999999999999999999999
Q ss_pred cccccccccccccc
Q psy13379 418 VKGEYTQNVPLSVT 431 (828)
Q Consensus 418 vk~~~~~Nvplsit 431 (828)
++...++|||+...
T Consensus 103 v~~~~~~Nvpi~~~ 116 (136)
T 3siq_A 103 LRRRTTNNVPINAE 116 (136)
T ss_dssp TTTCCCCCBCSCHH
T ss_pred eecccCCCccCCcc
Confidence 99999999998653
No 5
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.87 E-value=1.9e-23 Score=194.55 Aligned_cols=86 Identities=34% Similarity=0.688 Sum_probs=78.5
Q ss_pred ccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCc
Q psy13379 338 IGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPF 417 (828)
Q Consensus 338 ~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~F 417 (828)
...|..+++|++||.+||+. .+++++||+|||||+| ..|+|+||+|++.|.+|+++||||+||+||+|+|+|
T Consensus 9 ~~~~~~e~~Rl~TF~~WP~~-----~~~~~~LA~AGFyy~g---~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~F 80 (116)
T 1se0_A 9 MNDLNREETRLKTFTDWPLD-----WLDKRQLAQTGMYFTH---AGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPL 80 (116)
T ss_dssp -CCTTBHHHHHTTCTTCCCT-----TSCHHHHHHTTEEECS---STTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCTT
T ss_pred hhhhcCHHHHHHHHhhCCCC-----cCCHHHHHHcCCcCcC---CCCEEEecCcCCEecCCCCCCCHHHHHHHHCccCcc
Confidence 45688999999999999984 5789999999999995 489999999999999999999999999999999999
Q ss_pred cccccccccccccc
Q psy13379 418 VKGEYTQNVPLSVT 431 (828)
Q Consensus 418 vk~~~~~Nvplsit 431 (828)
++...++|+|++.+
T Consensus 81 v~~~~~~nvp~~~~ 94 (116)
T 1se0_A 81 LRRRTTNNVPINAE 94 (116)
T ss_dssp TTTCCCCCBCSCHH
T ss_pred eeeeccCccccCCC
Confidence 99988999988764
No 6
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.86 E-value=6.5e-23 Score=184.69 Aligned_cols=75 Identities=24% Similarity=0.418 Sum_probs=69.0
Q ss_pred cCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCcc
Q psy13379 339 GITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPFV 418 (828)
Q Consensus 339 ~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~Fv 418 (828)
..|.++++|++||.+||.. ..+++++||+|||||+| .+|+|+||+|++.|.+|+++||||+||++|+|+|+|+
T Consensus 16 ~~~~~e~~Rl~TF~~WP~~----~~~~p~~LA~AGFyytg---~~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~Fv 88 (94)
T 2poi_A 16 EEFVEEFNRLKTFANFPSG----SPVSASTLARAGFLYTG---EGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFI 88 (94)
T ss_dssp -CTTSHHHHHGGGTTCCTT----SSSCHHHHHHTTEEECS---STTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTT
T ss_pred hhhhCHHHHHHHHhcCCCC----ccCCHHHHHHcCCCCcC---CCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCccc
Confidence 4688999999999999975 35889999999999995 3899999999999999999999999999999999999
Q ss_pred cc
Q psy13379 419 KG 420 (828)
Q Consensus 419 k~ 420 (828)
+.
T Consensus 89 ~~ 90 (94)
T 2poi_A 89 NG 90 (94)
T ss_dssp TT
T ss_pred cc
Confidence 85
No 7
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.86 E-value=4.5e-23 Score=182.56 Aligned_cols=74 Identities=24% Similarity=0.478 Sum_probs=68.4
Q ss_pred CCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCccc
Q psy13379 340 ITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPFVK 419 (828)
Q Consensus 340 ~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~Fvk 419 (828)
+|.+++.|++||.+||+. ..+++++||+|||||+| .+|+|+||+|++.|.+|+++||||+||++|+|+|+|++
T Consensus 8 ~~~~e~~Rl~TF~~WP~~----~~~~~~~LA~AGFyy~g---~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~F~~ 80 (85)
T 3m1d_A 8 DFSCELYRMSTYSTFPAG----VPVSERSLARAGFYYTG---VNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQ 80 (85)
T ss_dssp CHHHHHHHHHGGGGCCTT----CSSCHHHHHHTTEEECS---STTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCHHHH
T ss_pred HhHhHHHHHHHHhcCCCC----CcCCHHHHHHCCCeEeC---CCCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCcchh
Confidence 467899999999999985 46899999999999995 38999999999999999999999999999999999997
Q ss_pred c
Q psy13379 420 G 420 (828)
Q Consensus 420 ~ 420 (828)
+
T Consensus 81 ~ 81 (85)
T 3m1d_A 81 N 81 (85)
T ss_dssp H
T ss_pred c
Confidence 5
No 8
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.9e-22 Score=186.64 Aligned_cols=76 Identities=24% Similarity=0.401 Sum_probs=69.1
Q ss_pred ccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCc
Q psy13379 338 IGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPF 417 (828)
Q Consensus 338 ~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~F 417 (828)
..+|..+++|++||.+||.. ..+++++||+|||||+| .+|+|+||+|++.|.+|+++||||+||++|+|+|+|
T Consensus 32 ~~~m~~e~~RL~TF~~WP~~----~~~~p~~LA~AGFyYtg---~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C~F 104 (111)
T 2qra_D 32 EEEFVEEFNRLKTFANFPSG----SPVSASTLARAGFLYTG---EGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRF 104 (111)
T ss_dssp --CTTSHHHHHHTTTTCCTT----CSSCHHHHHHTTEEECS---STTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTT
T ss_pred chhhhCHHHHHHHHhcCCCC----ccCCHHHHHHcCCCCcC---CCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcc
Confidence 34688999999999999975 35889999999999995 389999999999999999999999999999999999
Q ss_pred ccc
Q psy13379 418 VKG 420 (828)
Q Consensus 418 vk~ 420 (828)
++.
T Consensus 105 v~~ 107 (111)
T 2qra_D 105 ING 107 (111)
T ss_dssp TTT
T ss_pred hhh
Confidence 985
No 9
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.85 E-value=1e-22 Score=183.47 Aligned_cols=75 Identities=27% Similarity=0.628 Sum_probs=68.9
Q ss_pred cccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCC
Q psy13379 337 VIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCP 416 (828)
Q Consensus 337 ~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~ 416 (828)
..+.|.++++|++||.+||+. +++++||+|||||+| .+|+|+||+|++.|.+|+++||||+||++|+|+|+
T Consensus 7 ~~~~m~~~~~Rl~TF~~Wp~~------~~~~~LA~AGFyy~g---~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~ 77 (95)
T 3hl5_A 7 RNPSMADYEARIFTFGTWIYS------VNKEQLARAGFYALG---EGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCK 77 (95)
T ss_dssp SCGGGCSHHHHHHTTTTCCSS------SCHHHHHHTTEEECS---STTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCH
T ss_pred CCccccCHHHHHHHHcCCCCC------CCHHHHHhCCCeEcC---CCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCc
Confidence 345688999999999999863 789999999999995 48999999999999999999999999999999999
Q ss_pred cccc
Q psy13379 417 FVKG 420 (828)
Q Consensus 417 Fvk~ 420 (828)
|++.
T Consensus 78 f~~~ 81 (95)
T 3hl5_A 78 YLLE 81 (95)
T ss_dssp HHHH
T ss_pred chHh
Confidence 9975
No 10
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.7e-22 Score=185.56 Aligned_cols=78 Identities=29% Similarity=0.553 Sum_probs=69.4
Q ss_pred cccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCC
Q psy13379 337 VIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCP 416 (828)
Q Consensus 337 ~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~ 416 (828)
....|.++++|++||.+||+..+ .++|++||+|||||+| ..|.|+||+|++.|.+|+++||||.||++|+|+|+
T Consensus 14 ~~~~~~~~~~Rl~TF~~WP~~~~---~~~p~~LA~AGFyy~g---~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~ 87 (106)
T 2vm5_A 14 GKMRYQEEEARLASFRNWPFYVQ---GISPCVLSEAGFVFTG---KQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCE 87 (106)
T ss_dssp --CTTSSHHHHHHGGGGCCGGGT---TSCHHHHHHTTEEECS---STTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCH
T ss_pred CchhhcCHHHHHHHHhcCCCCcc---cCCHHHHHHcCCCCcC---CCCEEEccccCCEecCCCCCCCHHHHHHHHCcCCc
Confidence 44568899999999999997621 3789999999999995 38999999999999999999999999999999999
Q ss_pred cccc
Q psy13379 417 FVKG 420 (828)
Q Consensus 417 Fvk~ 420 (828)
|++.
T Consensus 88 Fv~~ 91 (106)
T 2vm5_A 88 FLRS 91 (106)
T ss_dssp HHHH
T ss_pred chhh
Confidence 9985
No 11
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.84 E-value=2.6e-22 Score=188.87 Aligned_cols=78 Identities=33% Similarity=0.592 Sum_probs=70.8
Q ss_pred ccccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCC
Q psy13379 336 QVIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCC 415 (828)
Q Consensus 336 ~~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C 415 (828)
+.++.|.++++|++||.+||.. ...++++||+|||||+| .+|+|+||+|++.|.+|+++||||.||+||+|+|
T Consensus 18 p~~p~~~~e~~Rl~TF~~WP~~----~~~~p~~LA~AGFyYtg---~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C 90 (124)
T 1jd5_A 18 PQYPEYAIETARLRTFEAWPRN----LKQKPHQLAEAGFFYTG---VGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQC 90 (124)
T ss_dssp CSCGGGCSHHHHHHHGGGCCTT----CSSCHHHHHHTTEEECS---STTCEEETTTCCEEECCCTTCCHHHHHHHHCTTC
T ss_pred CCChhhhCHHHHHHHHhhCCCC----ccCCHHHHHHcCCCCcC---CCCEEEecCCCCEecCCCCCCCHHHHHHHHCcCC
Confidence 3455788999999999999975 35789999999999995 3899999999999999999999999999999999
Q ss_pred Ccccc
Q psy13379 416 PFVKG 420 (828)
Q Consensus 416 ~Fvk~ 420 (828)
+|++.
T Consensus 91 ~Fv~~ 95 (124)
T 1jd5_A 91 RFVKL 95 (124)
T ss_dssp HHHHH
T ss_pred ceeec
Confidence 99985
No 12
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.84 E-value=3.2e-22 Score=190.20 Aligned_cols=78 Identities=31% Similarity=0.598 Sum_probs=71.0
Q ss_pred ccccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCC
Q psy13379 336 QVIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCC 415 (828)
Q Consensus 336 ~~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C 415 (828)
..++.|.++++|++||.+||.. ..++|++||+|||||+| ..|+|+||+|++.|.+|+++||||.||+||+|+|
T Consensus 40 ~~~~~m~~e~~RL~SF~~WP~~----~~~~pe~LA~AGFYYtg---~~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~C 112 (133)
T 2i3h_A 40 PAFPGMGSEELRLASFYDWPLT----AEVPPELLAAAGFFHTG---HQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPGC 112 (133)
T ss_dssp CSCGGGCCHHHHHHTTTTCSCT----TTSCHHHHHHTTEEECS---STTCEEETTTCCEEECCCTTCCHHHHHHHHCTTC
T ss_pred CCchhhhCHHHHHHHHhcCCCC----cCCCHHHHHHcCCCCcC---CCCEEEecccCCEeCCCCCCCCHHHHHHHHCcCC
Confidence 4456789999999999999974 36889999999999995 3899999999999999999999999999999999
Q ss_pred Ccccc
Q psy13379 416 PFVKG 420 (828)
Q Consensus 416 ~Fvk~ 420 (828)
+|++.
T Consensus 113 ~Fv~~ 117 (133)
T 2i3h_A 113 QFLLR 117 (133)
T ss_dssp HHHHH
T ss_pred ceehh
Confidence 99974
No 13
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.84 E-value=4.6e-22 Score=179.81 Aligned_cols=74 Identities=34% Similarity=0.723 Sum_probs=68.2
Q ss_pred CCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCccc
Q psy13379 340 ITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPFVK 419 (828)
Q Consensus 340 ~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~Fvk 419 (828)
.|.++++|++||.+||.. ..++|++||+|||||+| ..|.|+||+|++.|.+|+++||||+||++|+|+|+|++
T Consensus 10 ~m~~~~~Rl~TF~~Wp~~----~~~~~~~LA~AGFyy~g---~~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~f~~ 82 (97)
T 3d9t_A 10 SMQTHAARMRTFMYWPSS----VPVQPEQLASAGFYYVG---RNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLI 82 (97)
T ss_dssp GGCSHHHHHHGGGGCCTT----SSSCHHHHHHTTEEECS---STTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBHHHH
T ss_pred hhhCHHHHHHHHhcCCCc----ccCCHHHHHHcCCCCcC---CCCEEEecCcCCEecCCCCCCCHHHHHHHhCccChhhH
Confidence 477899999999999975 35789999999999995 37999999999999999999999999999999999997
Q ss_pred c
Q psy13379 420 G 420 (828)
Q Consensus 420 ~ 420 (828)
.
T Consensus 83 ~ 83 (97)
T 3d9t_A 83 R 83 (97)
T ss_dssp H
T ss_pred h
Confidence 5
No 14
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.83 E-value=1e-21 Score=184.41 Aligned_cols=76 Identities=33% Similarity=0.672 Sum_probs=69.5
Q ss_pred ccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCCc
Q psy13379 338 IGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCPF 417 (828)
Q Consensus 338 ~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~F 417 (828)
...|.++++|++||.+||.. ..++|++||+|||||+| .+|+|+||+|++.|.+|+++||||+||++|+|+|+|
T Consensus 14 ~~~m~s~~~Rl~TF~~WP~~----~~~~p~~LA~AGFyy~g---~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~F 86 (122)
T 3mup_A 14 NLSMQTHAARMRTFMYWPSS----VPVQPEQLASAGFYYVG---RNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEF 86 (122)
T ss_dssp CGGGCSHHHHHHGGGGCCTT----CSSCHHHHHHTTEEECS---STTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHH
T ss_pred CccccCHHHHHHHHhcCCCc----ccCCHHHHHHCCCeEeC---CCCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCcc
Confidence 34688899999999999975 35899999999999995 389999999999999999999999999999999999
Q ss_pred ccc
Q psy13379 418 VKG 420 (828)
Q Consensus 418 vk~ 420 (828)
++.
T Consensus 87 v~~ 89 (122)
T 3mup_A 87 LIR 89 (122)
T ss_dssp HHH
T ss_pred hhh
Confidence 975
No 15
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.82 E-value=1.3e-21 Score=183.40 Aligned_cols=75 Identities=27% Similarity=0.628 Sum_probs=69.0
Q ss_pred cccCCCCccccccccccccccccccccCChHHHHhCCeEeCCCCCCCCeEEeeccCCcccCcCCCCCchhhccccCCCCC
Q psy13379 337 VIGITDSGTGRFLSSAQWYRDDDRAIWALPDQMAQAGFYHQPSGTGDDRAMCFTCIVCLVCWEPTDEPWAEHERHSPCCP 416 (828)
Q Consensus 337 ~~~~~ss~e~RLkTF~nWP~~~kr~~~vspekLAkAGFYYtpt~~G~D~VkCF~Cg~~L~~WE~~DDP~~EH~rhsP~C~ 416 (828)
..+.|.++++|++||.+||+. +++++||+|||||+| ..|+|+||+|++.|.+|+++||||.||++|+|+|+
T Consensus 21 ~~~~m~~~~~Rl~TF~~Wp~~------~~p~~LA~AGFyy~g---~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~ 91 (121)
T 1g73_C 21 RNPSMADYEARIFTFGTWIYS------VNKEQLARAGFYALG---EGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCK 91 (121)
T ss_dssp SCGGGCSHHHHHHTTTTCCSS------SCHHHHHHTTEEECS---STTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCH
T ss_pred CChhhhCHHHHHHHHccCCCC------CCHHHHHHcCCCCcC---CCCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCc
Confidence 345688999999999999963 789999999999995 48999999999999999999999999999999999
Q ss_pred cccc
Q psy13379 417 FVKG 420 (828)
Q Consensus 417 Fvk~ 420 (828)
|++.
T Consensus 92 Fv~~ 95 (121)
T 1g73_C 92 YLLE 95 (121)
T ss_dssp HHHH
T ss_pred chhh
Confidence 9985
No 16
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.78 E-value=4.4e-20 Score=163.47 Aligned_cols=74 Identities=24% Similarity=0.294 Sum_probs=63.9
Q ss_pred CCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCC
Q psy13379 235 SDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGT 309 (828)
Q Consensus 235 ~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~ 309 (828)
.+++.+|.+|++|++||.+||+.. .++|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|.
T Consensus 3 ~~~~~~~~~e~~Rl~TF~~WP~~~--~~~~~~LA~AGFyy~g~---~D~v~Cf~C~~~l~~We~~DdP~~eH~------- 70 (85)
T 3m1d_A 3 LGSKYDFSCELYRMSTYSTFPAGV--PVSERSLARAGFYYTGV---NDKVKCFCCGLMLDNWKLGDSPIQKHK------- 70 (85)
T ss_dssp ----CCHHHHHHHHHGGGGCCTTC--SSCHHHHHHTTEEECSS---TTCEEETTTCCEECSCCTTCCHHHHHH-------
T ss_pred cccHHHhHhHHHHHHHHhcCCCCC--cCCHHHHHHCCCeEeCC---CCEEEeCCcCCEecCCCCCCCHHHHHH-------
Confidence 357889999999999999999863 68999999999999954 3999999997 999999999998
Q ss_pred CCCCcccccccc
Q psy13379 310 GDDRAMCFTIMG 321 (828)
Q Consensus 310 gr~sP~CpFV~~ 321 (828)
+++|+|+|+.+
T Consensus 71 -~~~p~C~F~~~ 81 (85)
T 3m1d_A 71 -QLYPSCSFIQN 81 (85)
T ss_dssp -HHCTTCHHHHH
T ss_pred -HHCccCcchhc
Confidence 67899999865
No 17
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.77 E-value=1.3e-19 Score=163.27 Aligned_cols=73 Identities=25% Similarity=0.352 Sum_probs=63.2
Q ss_pred chhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCCC
Q psy13379 237 HRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTGD 311 (828)
Q Consensus 237 ~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~gr 311 (828)
...+|.+|++||+||.+||+.. .++|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|. +
T Consensus 14 ~~~~~~~e~~Rl~TF~~WP~~~--~~~p~~LA~AGFyytg~---~D~V~Cf~C~~~l~~We~~DdP~~eH~--------r 80 (94)
T 2poi_A 14 KEEEFVEEFNRLKTFANFPSGS--PVSASTLARAGFLYTGE---GDTVRCFSCHAAVDRWQYGDSAVGRHR--------K 80 (94)
T ss_dssp ---CTTSHHHHHGGGTTCCTTS--SSCHHHHHHTTEEECSS---TTCEEETTTCCEECCCCTTCCHHHHHH--------H
T ss_pred cchhhhCHHHHHHHHhcCCCCc--cCCHHHHHHcCCCCcCC---CCEEEcccCCCEeCCCCCCCCHHHHHH--------H
Confidence 4668999999999999999863 68999999999999964 3999999997 999999999988 6
Q ss_pred CCccccccccc
Q psy13379 312 DRAMCFTIMGI 322 (828)
Q Consensus 312 ~sP~CpFV~~i 322 (828)
++|+|+|+..+
T Consensus 81 ~~P~C~Fv~~~ 91 (94)
T 2poi_A 81 VSPNCRFINGF 91 (94)
T ss_dssp HCTTCTTTTTT
T ss_pred HCccCcccccc
Confidence 78999999753
No 18
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.77 E-value=1.2e-19 Score=174.04 Aligned_cols=82 Identities=26% Similarity=0.465 Sum_probs=71.5
Q ss_pred CCCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccC
Q psy13379 233 QPSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLS 307 (828)
Q Consensus 233 ~~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~ 307 (828)
..++....|.++++||+||.+||+.. .++|++||+|||||++. .|+|+||+|+ |+.+|+|+++|.
T Consensus 33 ~~~p~~~~m~~e~~Rl~TF~~WP~~~--~~~p~~LA~AGFyY~g~---~D~V~Cf~C~~~L~~We~~DdP~~EH~----- 102 (141)
T 1i4o_C 33 TIYPRNPAMYSEEARLKSFQNWPDYA--HLTPRELASAGLYYTGI---GDQVQCFCCGGKLKNWEPCDRAWSEHR----- 102 (141)
T ss_pred ccCCCChhhhCHHHHHHHHhcCCCCc--cCCHHHHHHcCCcCcCC---CCEEEeccCCCEecCCCCCCCHHHHHH-----
Confidence 45567789999999999999999863 68999999999999954 3999999997 999999999988
Q ss_pred CCCCCCccccccccccccchh
Q psy13379 308 GTGDDRAMCFTIMGITRSDLA 328 (828)
Q Consensus 308 ~~gr~sP~CpFV~~i~r~nv~ 328 (828)
+|+|+|+|+.+... |++
T Consensus 103 ---r~~P~C~Fv~~~~~-nvp 119 (141)
T 1i4o_C 103 ---RHFPNCFFVLGRNL-NIR 119 (141)
T ss_pred ---HHCcCCcccCcccc-CCC
Confidence 68999999987765 554
No 19
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.75 E-value=3.3e-19 Score=165.10 Aligned_cols=73 Identities=25% Similarity=0.352 Sum_probs=63.3
Q ss_pred chhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCCC
Q psy13379 237 HRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTGD 311 (828)
Q Consensus 237 ~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~gr 311 (828)
...+|.+|++||+||.+||+.. .++|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|. +
T Consensus 31 ~~~~m~~e~~RL~TF~~WP~~~--~~~p~~LA~AGFyYtg~---~D~V~Cf~C~~~L~~We~~DdP~~eH~--------r 97 (111)
T 2qra_D 31 KEEEFVEEFNRLKTFANFPSGS--PVSASTLARAGFLYTGE---GDTVRCFSCHAAVDRWQYGDSAVGRHR--------K 97 (111)
T ss_dssp ---CTTSHHHHHHTTTTCCTTC--SSCHHHHHHTTEEECSS---TTCEEETTTCCEECCCCTTCCHHHHHH--------H
T ss_pred hchhhhCHHHHHHHHhcCCCCc--cCCHHHHHHcCCCCcCC---CCEEEcccCCCEeCCCCCCCCHHHHHH--------H
Confidence 4668999999999999999863 68999999999999964 3999999997 999999999988 6
Q ss_pred CCccccccccc
Q psy13379 312 DRAMCFTIMGI 322 (828)
Q Consensus 312 ~sP~CpFV~~i 322 (828)
++|+|+|+..+
T Consensus 98 ~sP~C~Fv~~~ 108 (111)
T 2qra_D 98 VSPNCRFINGF 108 (111)
T ss_dssp HCTTCTTTTTT
T ss_pred HCccCcchhhc
Confidence 78999999754
No 20
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.75 E-value=4.4e-19 Score=165.29 Aligned_cols=79 Identities=27% Similarity=0.410 Sum_probs=67.9
Q ss_pred chhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCCC
Q psy13379 237 HRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTGD 311 (828)
Q Consensus 237 ~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~gr 311 (828)
...+|.++++||+||.+||+. .+++++||+|||||+|. .|+|+||+|+ |+.+|+|+++|. |
T Consensus 8 ~~~~~~~e~~Rl~TF~~WP~~---~~~~~~LA~AGFyy~g~---~D~V~Cf~C~~~L~~We~~DdP~~eH~--------r 73 (116)
T 1se0_A 8 RMNDLNREETRLKTFTDWPLD---WLDKRQLAQTGMYFTHA---GDKVKCFFCGVEIGSWEQEDQPVPEHQ--------R 73 (116)
T ss_dssp --CCTTBHHHHHTTCTTCCCT---TSCHHHHHHTTEEECSS---TTCEEETTTCCEEESCCTTCCHHHHHH--------H
T ss_pred hhhhhcCHHHHHHHHhhCCCC---cCCHHHHHHcCCcCcCC---CCEEEecCcCCEecCCCCCCCHHHHHH--------H
Confidence 455799999999999999985 58999999999999953 3999999997 999999999998 6
Q ss_pred CCccccccccccccchhh
Q psy13379 312 DRAMCFTIMGITRSDLAQ 329 (828)
Q Consensus 312 ~sP~CpFV~~i~r~nv~q 329 (828)
|+|+|+|+.....++++.
T Consensus 74 ~~p~C~Fv~~~~~~nvp~ 91 (116)
T 1se0_A 74 WSPNCPLLRRRTTNNVPI 91 (116)
T ss_dssp HCTTCTTTTTCCCCCBCS
T ss_pred HCccCcceeeeccCcccc
Confidence 789999998776666543
No 21
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.75 E-value=4.9e-19 Score=168.85 Aligned_cols=78 Identities=27% Similarity=0.410 Sum_probs=69.0
Q ss_pred hhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCCCC
Q psy13379 238 RNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTGDD 312 (828)
Q Consensus 238 ~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~gr~ 312 (828)
..+|.+|++|++||.+||+. .++|++||+|||||++ . .|+|+||+|+ |+.+|+|+++|. |+
T Consensus 31 ~~dy~~e~~RL~TF~~WP~~---~~~p~~LA~AGFYYtG--~-~D~V~Cf~C~~~L~~We~~DdP~~EH~--------r~ 96 (136)
T 3siq_A 31 MNDLNREETRLKTFTDWPLD---WLDKRQLAQTGMYFTH--A-GDKVKCFFCGVEIGSWEQEDQPVPEHQ--------RW 96 (136)
T ss_dssp CCCTTBHHHHHHTTTTCCCT---TSCHHHHHHTTEEECS--S-TTCEEETTTCCEEECCCTTCCHHHHHH--------HH
T ss_pred HHhhhCHHHHHHHHccCCCC---cCCHHHHHHCCCeEcC--C-CCeEEEeccCCEecCCCCCCCHHHHHH--------HH
Confidence 55799999999999999986 4899999999999995 3 3999999997 999999999998 68
Q ss_pred Cccccccccccccchhh
Q psy13379 313 RAMCFTIMGITRSDLAQ 329 (828)
Q Consensus 313 sP~CpFV~~i~r~nv~q 329 (828)
+|+|+|+..+..+|++.
T Consensus 97 sP~C~Fv~~~~~~Nvpi 113 (136)
T 3siq_A 97 SPNCPLLRRRTTNNVPI 113 (136)
T ss_dssp CTTCTTTTTCCCCCBCS
T ss_pred CcCCcceecccCCCccC
Confidence 99999999877666653
No 22
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.75 E-value=3.3e-19 Score=163.70 Aligned_cols=77 Identities=21% Similarity=0.292 Sum_probs=64.6
Q ss_pred CCCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccC
Q psy13379 233 QPSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLS 307 (828)
Q Consensus 233 ~~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~ 307 (828)
+..+....|.++++||+||.+||+.. ..++|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|.
T Consensus 10 ~~~~~~~~~~~~~~Rl~TF~~WP~~~-~~~~p~~LA~AGFyy~g~---~D~V~Cf~C~~~L~~We~~DdP~~eH~----- 80 (106)
T 2vm5_A 10 RLRGGKMRYQEEEARLASFRNWPFYV-QGISPCVLSEAGFVFTGK---QDTVQCFSCGGCLGNWEEGDDPWKEHA----- 80 (106)
T ss_dssp CCC---CTTSSHHHHHHGGGGCCGGG-TTSCHHHHHHTTEEECSS---TTCEEETTTCCEEESCCTTCCHHHHHH-----
T ss_pred CCCCCchhhcCHHHHHHHHhcCCCCc-ccCCHHHHHHcCCCCcCC---CCEEEccccCCEecCCCCCCCHHHHHH-----
Confidence 34467789999999999999999863 137999999999999954 3899999997 999999999998
Q ss_pred CCCCCCcccccccc
Q psy13379 308 GTGDDRAMCFTIMG 321 (828)
Q Consensus 308 ~~gr~sP~CpFV~~ 321 (828)
+|+|+|+|+..
T Consensus 81 ---r~~p~C~Fv~~ 91 (106)
T 2vm5_A 81 ---KWFPKCEFLRS 91 (106)
T ss_dssp ---HHCTTCHHHHH
T ss_pred ---HHCcCCcchhh
Confidence 67899999864
No 23
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.74 E-value=5.7e-19 Score=159.13 Aligned_cols=73 Identities=23% Similarity=0.290 Sum_probs=65.2
Q ss_pred CCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCC
Q psy13379 234 PSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSG 308 (828)
Q Consensus 234 ~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~ 308 (828)
..|....|.++++|++||.+||+. ++|++||+|||||++ . .|+|+||+|+ |+.+|+|+++|.
T Consensus 4 ~~p~~~~m~~~~~Rl~TF~~Wp~~----~~~~~LA~AGFyy~g--~-~D~v~Cf~C~~~l~~We~~DdP~~eH~------ 70 (95)
T 3hl5_A 4 MLPRNPSMADYEARIFTFGTWIYS----VNKEQLARAGFYALG--E-GDKVKCFHCGGGLTDWKPSEDPWEQHA------ 70 (95)
T ss_dssp SSCSCGGGCSHHHHHHTTTTCCSS----SCHHHHHHTTEEECS--S-TTCEEETTTCCEECCCCTTCCHHHHHH------
T ss_pred CCCCCccccCHHHHHHHHcCCCCC----CCHHHHHhCCCeEcC--C-CCeEEecCCCCCccCcCCCCCHHHHHH------
Confidence 456788999999999999999975 799999999999995 3 3999999997 999999999998
Q ss_pred CCCCCcccccccc
Q psy13379 309 TGDDRAMCFTIMG 321 (828)
Q Consensus 309 ~gr~sP~CpFV~~ 321 (828)
+++|+|+|+..
T Consensus 71 --r~~p~C~f~~~ 81 (95)
T 3hl5_A 71 --KWYPGCKYLLE 81 (95)
T ss_dssp --HHCTTCHHHHH
T ss_pred --HHCcCCcchHh
Confidence 67899999864
No 24
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.74 E-value=7.5e-19 Score=167.17 Aligned_cols=75 Identities=25% Similarity=0.354 Sum_probs=66.2
Q ss_pred CCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCC
Q psy13379 234 PSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSG 308 (828)
Q Consensus 234 ~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~ 308 (828)
..+...+|.++++||+||.+||+.. .++|++||+|||||++. .|+|+||+|+ |+.+|||+++|.
T Consensus 38 ~~~~~~~m~~e~~RL~SF~~WP~~~--~~~pe~LA~AGFYYtg~---~D~V~Cf~C~~~L~~We~~DDP~~EH~------ 106 (133)
T 2i3h_A 38 RGPAFPGMGSEELRLASFYDWPLTA--EVPPELLAAAGFFHTGH---QDKVRCFFCYGGLQSWKRGDDPWTEHA------ 106 (133)
T ss_dssp -CCSCGGGCCHHHHHHTTTTCSCTT--TSCHHHHHHTTEEECSS---TTCEEETTTCCEEECCCTTCCHHHHHH------
T ss_pred CCCCchhhhCHHHHHHHHhcCCCCc--CCCHHHHHHcCCCCcCC---CCEEEecccCCEeCCCCCCCCHHHHHH------
Confidence 4567889999999999999999852 68999999999999954 3999999997 999999999998
Q ss_pred CCCCCcccccccc
Q psy13379 309 TGDDRAMCFTIMG 321 (828)
Q Consensus 309 ~gr~sP~CpFV~~ 321 (828)
|++|+|+|+..
T Consensus 107 --r~~P~C~Fv~~ 117 (133)
T 2i3h_A 107 --KWFPGCQFLLR 117 (133)
T ss_dssp --HHCTTCHHHHH
T ss_pred --HHCcCCceehh
Confidence 68999999864
No 25
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.74 E-value=8.4e-19 Score=165.14 Aligned_cols=76 Identities=26% Similarity=0.291 Sum_probs=67.2
Q ss_pred CCCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccC
Q psy13379 233 QPSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLS 307 (828)
Q Consensus 233 ~~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~ 307 (828)
..++....|.++++||+||.+||+.. ..+|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|.
T Consensus 15 ~~~p~~p~~~~e~~Rl~TF~~WP~~~--~~~p~~LA~AGFyYtg~---~D~V~Cf~C~~~L~~We~~DdP~~EH~----- 84 (124)
T 1jd5_A 15 NYFPQYPEYAIETARLRTFEAWPRNL--KQKPHQLAEAGFFYTGV---GDRVRCFSCGGGLMDWNDNDEPWEQHA----- 84 (124)
T ss_dssp CCCCSCGGGCSHHHHHHHGGGCCTTC--SSCHHHHHHTTEEECSS---TTCEEETTTCCEEECCCTTCCHHHHHH-----
T ss_pred CCCCCChhhhCHHHHHHHHhhCCCCc--cCCHHHHHHcCCCCcCC---CCEEEecCCCCEecCCCCCCCHHHHHH-----
Confidence 34567789999999999999999863 57999999999999954 3999999997 999999999998
Q ss_pred CCCCCCcccccccc
Q psy13379 308 GTGDDRAMCFTIMG 321 (828)
Q Consensus 308 ~~gr~sP~CpFV~~ 321 (828)
+|+|+|+|+..
T Consensus 85 ---r~~P~C~Fv~~ 95 (124)
T 1jd5_A 85 ---LWLSQCRFVKL 95 (124)
T ss_dssp ---HHCTTCHHHHH
T ss_pred ---HHCcCCceeec
Confidence 67999999864
No 26
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.73 E-value=1.2e-18 Score=157.45 Aligned_cols=73 Identities=29% Similarity=0.353 Sum_probs=63.8
Q ss_pred CchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCC
Q psy13379 236 DHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTG 310 (828)
Q Consensus 236 ~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~g 310 (828)
..+..|.++++||+||.+||+.. .++|++||+|||||++. .|.|+||+|+ |+.+|+|+++|.
T Consensus 6 ~~~~~m~~~~~Rl~TF~~Wp~~~--~~~~~~LA~AGFyy~g~---~D~v~Cf~C~~~l~~We~~Ddp~~eH~-------- 72 (97)
T 3d9t_A 6 ISNLSMQTHAARMRTFMYWPSSV--PVQPEQLASAGFYYVGR---NDDVKCFCCDGGLRCWESGDDPWVEHA-------- 72 (97)
T ss_dssp --CGGGCSHHHHHHGGGGCCTTS--SSCHHHHHHTTEEECSS---TTCEEETTTCCEEECCCTTCCHHHHHH--------
T ss_pred ccchhhhCHHHHHHHHhcCCCcc--cCCHHHHHHcCCCCcCC---CCEEEecCcCCEecCCCCCCCHHHHHH--------
Confidence 45678999999999999999863 58999999999999954 3899999997 999999999988
Q ss_pred CCCcccccccc
Q psy13379 311 DDRAMCFTIMG 321 (828)
Q Consensus 311 r~sP~CpFV~~ 321 (828)
+++|+|+|+..
T Consensus 73 r~~p~C~f~~~ 83 (97)
T 3d9t_A 73 KWFPRCEFLIR 83 (97)
T ss_dssp HHCTTBHHHHH
T ss_pred HhCccChhhHh
Confidence 67899999864
No 27
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.72 E-value=2e-18 Score=162.18 Aligned_cols=73 Identities=29% Similarity=0.353 Sum_probs=65.3
Q ss_pred CchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCC
Q psy13379 236 DHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTG 310 (828)
Q Consensus 236 ~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~g 310 (828)
+.+..|.++++|++||.+||+.. .++|++||+|||||+|. .|+|+||+|+ |+.+|+|+++|.
T Consensus 12 ~~~~~m~s~~~Rl~TF~~WP~~~--~~~p~~LA~AGFyy~g~---~D~V~Cf~C~~~L~~We~~DdP~~EH~-------- 78 (122)
T 3mup_A 12 ISNLSMQTHAARMRTFMYWPSSV--PVQPEQLASAGFYYVGR---NDDVKCFCCDGGLRCWESGDDPWVEHA-------- 78 (122)
T ss_dssp CSCGGGCSHHHHHHGGGGCCTTC--SSCHHHHHHTTEEECSS---TTCEEETTTCCEECCCCTTCCHHHHHH--------
T ss_pred cCCccccCHHHHHHHHhcCCCcc--cCCHHHHHHCCCeEeCC---CCeEEecCcCCEecCCCCCCCHHHHHH--------
Confidence 46778999999999999999863 68999999999999954 3999999997 999999999988
Q ss_pred CCCcccccccc
Q psy13379 311 DDRAMCFTIMG 321 (828)
Q Consensus 311 r~sP~CpFV~~ 321 (828)
+++|+|+|+..
T Consensus 79 r~~P~C~Fv~~ 89 (122)
T 3mup_A 79 KWFPRCEFLIR 89 (122)
T ss_dssp HHCTTCHHHHH
T ss_pred HHCcCCcchhh
Confidence 68999999864
No 28
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.71 E-value=2.4e-18 Score=161.36 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=65.2
Q ss_pred CCCCchhhcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccC
Q psy13379 233 QPSDHRNLMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLS 307 (828)
Q Consensus 233 ~~~~~~~dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~ 307 (828)
+.++....|.++++||+||.+||+. ++|++||+|||||++. .|+|+||+|+ |+.+|+|+++|.
T Consensus 17 ~~~p~~~~m~~~~~Rl~TF~~Wp~~----~~p~~LA~AGFyy~g~---~D~V~Cf~C~~~L~~We~~DdP~~eH~----- 84 (121)
T 1g73_C 17 TNLPRNPSMADYEARIFTFGTWIYS----VNKEQLARAGFYALGE---GDKVKCFHCGGGLTDWKPSEDPWEQHA----- 84 (121)
T ss_dssp --CCSCGGGCSHHHHHHTTTTCCSS----SCHHHHHHTTEEECSS---TTCEEETTTCCEEESCCTTCCHHHHHH-----
T ss_pred CCCCCChhhhCHHHHHHHHccCCCC----CCHHHHHHcCCCCcCC---CCEEEcCcCCCCcCCCCCCCCHHHHHH-----
Confidence 3457888999999999999999975 7899999999999953 3899999997 999999999998
Q ss_pred CCCCCCcccccccc
Q psy13379 308 GTGDDRAMCFTIMG 321 (828)
Q Consensus 308 ~~gr~sP~CpFV~~ 321 (828)
+|+|+|+|+..
T Consensus 85 ---r~~P~C~Fv~~ 95 (121)
T 1g73_C 85 ---KWYPGCKYLLE 95 (121)
T ss_dssp ---HHCTTCHHHHH
T ss_pred ---HHCcCCcchhh
Confidence 67899999874
No 29
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.59 E-value=2.9e-16 Score=169.10 Aligned_cols=69 Identities=30% Similarity=0.416 Sum_probs=62.5
Q ss_pred hcccHHHHHhcccCCCCCCCCCCCHHHHHhCCeEeCCCCCCCCeEEEeeee-----ccCCCchhhcccccccCCCCCCCc
Q psy13379 240 LMFSEAARRETFAKWPHMDYKWALPDQMAQAGFYHQPSGTGYDRAMCFTIL-----WALPDQMAQAGFYHQLSGTGDDRA 314 (828)
Q Consensus 240 dM~sEe~RL~TF~nWP~~~~~~ispe~LArAGFYYTPtg~~~D~VkCF~Cg-----WE~gDdP~eeH~~H~~~~~gr~sP 314 (828)
.|.++++|++||.+||+.. .++|++||+|||||+|. .|+|+||+|+ |+.+|||+++|. +|+|
T Consensus 2 ~m~~~~~Rl~tF~~WP~~~--~~~~~~lA~AGFyy~g~---~D~v~Cf~C~~~l~~We~~DdP~~eH~--------~~~p 68 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSSV--PVQPEQLASAGFYYVGR---NDDVKCFSCDGGLRCWESGDDPWVEHA--------KWFP 68 (345)
T ss_dssp TTSSHHHHHHHGGGSCTTC--SSCHHHHHHTTEEECSS---TTCEEETTTCCEECCCCTTCCHHHHHH--------HHCT
T ss_pred CCccHHHHHHHHhhCCCcc--cCCHHHHHhCCCeecCC---CCeEEecCCCCCccCCCCCCCHHHHHH--------HhCC
Confidence 5899999999999999873 68999999999999954 3999999997 999999999998 6899
Q ss_pred ccccccc
Q psy13379 315 MCFTIMG 321 (828)
Q Consensus 315 ~CpFV~~ 321 (828)
+|+|+..
T Consensus 69 ~C~f~~~ 75 (345)
T 3t6p_A 69 RCEFLIR 75 (345)
T ss_dssp TCHHHHH
T ss_pred CCccHHH
Confidence 9999864
No 30
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.45 E-value=4.9e-15 Score=142.10 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=56.4
Q ss_pred CCCCCCCcccccccceeEeecccccccCCchhheecccee-------ceeeecccCcccccccccCCCCCCcccc
Q psy13379 453 ITTLPGYIPLISRDSTVLVLNYIRQLKTLPRCLAISRSYH-------ETVPCWYSTMYDLVWRIARLPSPWSRVQ 520 (828)
Q Consensus 453 ~p~~P~y~s~eaRLsSF~~W~wp~~Lk~spe~LA~AGFFY-------D~VkCFYCgggL~dWE~gDdpdPW~~~q 520 (828)
.|.++.|..+++|++||.+|+.....+.+|++||+||||| |.|+||||+++|.+|++ +|+||.+|.
T Consensus 6 ~p~~~~~~~~~~Rl~TF~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf~C~~~L~~We~--~DdP~~EH~ 78 (142)
T 2qfa_A 6 LPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEP--DDDPIEEHK 78 (142)
T ss_dssp CCTTTGGGSHHHHHHTCCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEETTTCCEECCCCT--TCCHHHHHH
T ss_pred CCCcccccCHHHHHHHHhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcCCCCCEecccCC--CCCHHHHHH
Confidence 3567789999999999987655443457899999999999 89999999999999999 567998884
No 31
>2kna_A Baculoviral IAP repeat-containing protein 4; XIAP, UBA, apoptosis, ligase, metal-binding, phosphoprotein, inhibitor, thiol protease inhibitor; NMR {Homo sapiens}
Probab=95.60 E-value=0.0016 Score=59.67 Aligned_cols=40 Identities=15% Similarity=0.093 Sum_probs=35.7
Q ss_pred cccCCCCCCCCccceeeccccccccccCCCccccchhHHHHHHHHhcCCccccHhhhhccc
Q psy13379 518 RVQFPPEGGFYPEQIMLDLGTADILLSCPPHAAWLYPAHITRQYRAGTQLYTTTQDITTLS 578 (828)
Q Consensus 518 ~~q~~~emGF~~~~I~l~~G~a~~~ls~~~~~~~~~r~vi~~ql~~~g~~fts~~~l~~~~ 578 (828)
.++.+.+|||+...| +++|++||+++|.+|+|+++|+.+.
T Consensus 30 vV~~alemGf~~~~V---------------------~~~v~~ki~~sG~~y~Tve~Lv~~l 69 (104)
T 2kna_A 30 MVQEAIRMGFSFKDI---------------------KKIMEEKIQISGSNYKSLEVLVADL 69 (104)
T ss_dssp HHHHHHHTTCCHHHH---------------------HHHHHHHHHHHSSCCSSHHHHHHHH
T ss_pred HHHHHHHcCccHHHH---------------------HHHHHHHHHHhCCCcCCHHHHHHHH
Confidence 455556799999999 9999999999999999999999874
No 32
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.78 E-value=0.15 Score=49.38 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=40.4
Q ss_pred eeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 31 SVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
-|-|-++ | +|+++.+++|+|||+++|.+++...+...+..|.+.-+...++.|++
T Consensus 30 ~l~WS~~-~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 30 LVDWSSG-N-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CEEECTT-S-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE
T ss_pred EEEECCC-C-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE
Confidence 3455554 6 67778899999999999999999888876666665555445555554
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.45 E-value=0.49 Score=49.58 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=42.8
Q ss_pred cceeeeecC-CcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPN-LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~-LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
+..|.|||. -|+|..-+.+|.|+|||++++.......+.+-... -.+.|.|..++.|++
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEE
Confidence 778999995 46777778899999999998866555554433334 456677877766665
No 34
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=88.47 E-value=0.97 Score=47.02 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=34.8
Q ss_pred CcEEEEEeecCeEEEEeccccceeeeecccCCCCcee-EEeeCCCCeE
Q psy13379 38 LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSYDKV 84 (828)
Q Consensus 38 LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~~~~ 84 (828)
-| +|++.-+++|+|||+.+|.+++...+...+..|. ++|.|....|
T Consensus 116 ~n-~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~l 162 (420)
T 4gga_A 116 GN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYL 162 (420)
T ss_dssp TS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEE
T ss_pred CC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEE
Confidence 36 5667779999999999999999998887666654 5566654433
No 35
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=88.10 E-value=0.56 Score=46.65 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=43.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+..+.+||..+.|+..+.+|+|+|||..++.++++.....+ ....+++.|..++.++
T Consensus 231 v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 287 (304)
T 2ynn_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE-RSWCIATHPTGRKNYI 287 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSS-SEEEEEECTTCGGGCE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCc-cEEEEEECCCCCceEE
Confidence 56789999999999999999999999999999988654332 1245667787665433
No 36
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=86.90 E-value=1.4 Score=43.88 Aligned_cols=59 Identities=14% Similarity=0.099 Sum_probs=42.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+.+|.++|.-+.|+..+.+|+|+|||..++..+....-.+++.-..+++.|..+.+|++
T Consensus 100 v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 67899999999999999999999999998854433322333323556677765555544
No 37
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.77 E-value=1.5 Score=44.27 Aligned_cols=54 Identities=20% Similarity=0.225 Sum_probs=40.3
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSY 81 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~ 81 (828)
.+..+.++|+-+.|+..+.+|.|+|||..++..+.+.........| .+.+-|..
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 3678999999999999999999999999999888776533322333 34455543
No 38
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.76 E-value=1.9 Score=43.45 Aligned_cols=57 Identities=14% Similarity=0.064 Sum_probs=41.4
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEecccccee-eeecccCCCCceeEEeeCCCCeE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVL-RKCAFAEEGQPIKGAYLPSYDKV 84 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL-~~~~ls~~~~~~~~~~~~~~~~~ 84 (828)
.+..+.++|.-+.|...+.+|.|+|||+.+|..+ ++....+.+.--.+.|.|....|
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Confidence 3788999999888888899999999999999877 55555344322445555544333
No 39
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=85.77 E-value=1.5 Score=42.79 Aligned_cols=58 Identities=12% Similarity=0.177 Sum_probs=44.7
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+.|+..+.+|.|+|||+.+|..+++..-. ... -.+++-|....|+.+
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQL--DQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC--SSCEEEEEECTTSSCEEEE
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCC--CCCceEEEECCCCCeEEEE
Confidence 3778999999999999999999999999999998876532 234 455666665555554
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.65 E-value=1.5 Score=45.24 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=42.8
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+.++.++|.=+.|...+.+|+|+|||+.+|.++++..-.+.+.--.++|-|.. +.|+
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg-~~la 328 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS-TYVA 328 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS-CEEE
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC-CEEE
Confidence 56788999999998999999999999999999987644454433455666643 4443
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=85.39 E-value=1.6 Score=45.21 Aligned_cols=58 Identities=21% Similarity=0.095 Sum_probs=44.4
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.++|.-+.|+..+.+|+|+|||+++|.++++..- +.+....+.+.|....+|++
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s 187 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLS 187 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceee
Confidence 57889999999999999999999999999999887542 32322445666766666664
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=85.39 E-value=2.3 Score=41.55 Aligned_cols=58 Identities=10% Similarity=-0.048 Sum_probs=44.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+..+.++|.-+.|+..+.+|.|+|||..+|..++... .......+.+.|....++...
T Consensus 77 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 134 (369)
T 3zwl_B 77 IWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK--SPVPVKRVEFSPCGNYFLAIL 134 (369)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee--cCCCeEEEEEccCCCEEEEec
Confidence 6788999999999999999999999999999988877 322235566667655555443
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=85.34 E-value=2 Score=44.03 Aligned_cols=59 Identities=20% Similarity=0.331 Sum_probs=46.7
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCC-ceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQ-PIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~-~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+.|+..+.+|.|+|||..+|.++++....+.+. ...+.+.|. +++|++
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~ 237 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSE-GKILTT 237 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECST-TEEEEE
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCC-CcEEEE
Confidence 36789999999999999999999999999999998875455554 366777775 555554
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=85.19 E-value=2.1 Score=41.85 Aligned_cols=58 Identities=14% Similarity=0.268 Sum_probs=42.3
Q ss_pred ecceeeeec-CCcEEEEEeecCeEEEEeccccceeeeecc-cCCCCc-eeEEeeCCCCeEE
Q psy13379 28 DPDSVIYHP-NLNILIVLSRNAECIVVDINSGCVLRKCAF-AEEGQP-IKGAYLPSYDKVL 85 (828)
Q Consensus 28 ~~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSgviL~~~~l-s~~~~~-~~~~~~~~~~~~~ 85 (828)
.+..+.++| +-+.|+..+.+|.|+|||+.+|..++...- .+.... ..+.+.|....++
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 367899999 888999999999999999999988877531 222334 5556666554444
No 45
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=84.94 E-value=2.5 Score=41.26 Aligned_cols=59 Identities=20% Similarity=0.301 Sum_probs=45.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.++|.-+.|++.+.+|.|+|||..+|.+++..... .....+.+.|....+++..+
T Consensus 221 v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~ 279 (369)
T 3zwl_B 221 ISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD--CPLNTAVITPLKEFIILGGG 279 (369)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEEC
T ss_pred eeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC--CCceeEEecCCCceEEEeec
Confidence 678999999999999999999999999999998887622 22255566666666555543
No 46
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=84.53 E-value=1.7 Score=45.40 Aligned_cols=56 Identities=23% Similarity=0.325 Sum_probs=41.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCcee-EEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~~~~~~~ 87 (828)
+..+.+||.-+.|+..+.+|+|+|||..+|..+++..-+. ..|. +.|.|+ +++|++
T Consensus 111 V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~--~~V~~v~~~~~-~~~l~s 167 (410)
T 1vyh_C 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHT--DSVQDISFDHS-GKLLAS 167 (410)
T ss_dssp EEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCS--SCEEEEEECTT-SSEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccC--CcEEEEEEcCC-CCEEEE
Confidence 5688999999999999999999999999998887654322 2344 445554 444443
No 47
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=84.03 E-value=1.5 Score=44.97 Aligned_cols=57 Identities=18% Similarity=0.180 Sum_probs=40.8
Q ss_pred cceeeeecCCc-EEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLN-ILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LN-viL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.|.|.-. .|...+.+|+|+|||+++|.+++.- .+.+.--.++|-|..+++|++
T Consensus 272 v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~--~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 272 ITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL--SHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp EEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--CCSSCEEEEEECSSSTTEEEE
T ss_pred EEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--CCCCCEEEEEEeCCCCCEEEE
Confidence 56788998764 4555677899999999999998763 454433455677766666654
No 48
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=83.50 E-value=4.7 Score=40.35 Aligned_cols=61 Identities=7% Similarity=0.134 Sum_probs=46.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCce
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTKS 91 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 91 (828)
+..+.++|.-+.|+..+.+|.|+|||..++..+++... ......+++-|....++......
T Consensus 199 v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~v~~~~~sp~~~~la~~~~~~ 259 (319)
T 3frx_A 199 INTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA--QDEVFSLAFSPNRYWLAAATATG 259 (319)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC--CSCEEEEEECSSSSEEEEEETTE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC--CCcEEEEEEcCCCCEEEEEcCCC
Confidence 56789999999999999999999999999998877653 23236677878766665554443
No 49
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=83.29 E-value=2.9 Score=41.26 Aligned_cols=60 Identities=10% Similarity=0.099 Sum_probs=45.5
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+.|+..+.+|.|+|||..++...+...+...... ..+.|.|....++..
T Consensus 54 ~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 114 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG 114 (372)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEE
Confidence 367899999999999999999999999999987777665544445 455666665555544
No 50
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=82.89 E-value=2.9 Score=42.82 Aligned_cols=55 Identities=9% Similarity=0.130 Sum_probs=42.1
Q ss_pred ecceeeeecCCcEEEEEeecCe-EEEEeccccceeeeeccc-CCCCceeEEeeCCCC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAE-CIVVDINSGCVLRKCAFA-EEGQPIKGAYLPSYD 82 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~-v~V~D~nSgviL~~~~ls-~~~~~~~~~~~~~~~ 82 (828)
.+..+.++|.-+.|+..+.+|+ |+|||+.+|..+++..-. +.+.-..+++-|...
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~ 253 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGS 253 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSC
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCC
Confidence 3678999999999999999998 999999999999887643 333224556666443
No 51
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=82.85 E-value=4.3 Score=39.80 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=54.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCC---CceeEEeeCCCCeEEEEcCceeeeeeccCceeeeh
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEG---QPIKGAYLPSYDKVLLTDTKSVGVRSDYNGVLLLD 105 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~---~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ll~ 105 (828)
+..+.++|.-+.|.+.+.+|.|.+||..+|.+++.......+ ....+.+-|..+.+++++.. -+.+.++|
T Consensus 187 ~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-------~~~v~~~d 259 (353)
T 3vgz_A 187 STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK-------AAEVLVVD 259 (353)
T ss_dssp CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-------SSEEEEEE
T ss_pred cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-------CCEEEEEE
Confidence 567899999999999999999999999999999988775432 22457888888888888642 24455555
Q ss_pred h
Q psy13379 106 T 106 (828)
Q Consensus 106 ~ 106 (828)
.
T Consensus 260 ~ 260 (353)
T 3vgz_A 260 T 260 (353)
T ss_dssp T
T ss_pred C
Confidence 4
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=82.54 E-value=3.2 Score=40.68 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=42.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
+..+.++|+-+.|+..+.+|.|+|||..+|..++...-...... +...+.+..+++|++
T Consensus 195 ~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 254 (312)
T 4ery_A 195 VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 254 (312)
T ss_dssp EEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE
T ss_pred eEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE
Confidence 45688999999999999999999999999998887654433222 444444444444443
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=82.36 E-value=2.8 Score=42.17 Aligned_cols=60 Identities=8% Similarity=0.100 Sum_probs=46.4
Q ss_pred ecceeeeecC-CcEEEEEeecCeEEEEeccccceeeeecccC-----CCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPN-LNILIVLSRNAECIVVDINSGCVLRKCAFAE-----EGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~-LNviL~~~~~g~v~V~D~nSgviL~~~~ls~-----~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|. -+.++..+.+|.|+|||..++..++...... ......+++.|...+++++
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 4788999998 7888888999999999999999888877654 2323556777776566554
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=82.17 E-value=3.6 Score=39.73 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=43.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.++|.-+.|+..+.+|.|+|||..++..++..... +....+.+.|....+++.
T Consensus 186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEE
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEE
Confidence 678899999999999999999999999999988876532 222555666766555544
No 55
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=82.11 E-value=3.1 Score=40.56 Aligned_cols=59 Identities=17% Similarity=0.222 Sum_probs=41.3
Q ss_pred ecceeeeecCC---cEEEEEeecCeEEEEeccc-cceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 28 DPDSVIYHPNL---NILIVLSRNAECIVVDINS-GCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 28 ~~~~i~Yhp~L---NviL~~~~~g~v~V~D~nS-gviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
.+..+.++|.- +.|+..+.+|.|+|||+.+ |..+....-.+++.-..+.+.|....|+.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 47889999996 8888888899999999998 66554433334333355667775555443
No 56
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=81.97 E-value=3.9 Score=39.73 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=40.0
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+.+|.++|.-+.|+..+.+|.|+|||.+++..++...-.. .|....+...+.++
T Consensus 218 v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~~~~~~~~~ 271 (340)
T 4aow_A 218 LNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD---IINALCFSPNRYWL 271 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS---CEEEEEECSSSSEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc---eEEeeecCCCCcee
Confidence 5678999999999999999999999999998887654332 44444444344433
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=81.81 E-value=2.9 Score=42.20 Aligned_cols=60 Identities=15% Similarity=0.106 Sum_probs=45.6
Q ss_pred ecceeeeecCC-cEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNL-NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.- +.|+..+.+|.|+|||.+++.......+.+.... ..+.|.|..+++|++
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEE
Confidence 36789999987 8888999999999999999988887776433334 556677755555554
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=81.77 E-value=2 Score=42.03 Aligned_cols=60 Identities=10% Similarity=0.078 Sum_probs=43.7
Q ss_pred ecceeeeecCCcEEEEEee----cCeEEEEeccccceeeeecccCCCCceeEEeeCCC--CeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSR----NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSY--DKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~----~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~--~~~~~~ 87 (828)
.+..+.++|.-+.+++.++ +|.|+|||.++|.+.....+.+.+.-..+.|.|.. +++|++
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 85 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLAT 85 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEE
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEE
Confidence 3678999998877776663 79999999999988777666665444666777764 444443
No 59
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=81.76 E-value=3.7 Score=41.27 Aligned_cols=58 Identities=9% Similarity=-0.052 Sum_probs=41.0
Q ss_pred ecceeeeec--CCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 28 DPDSVIYHP--NLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 28 ~~~~i~Yhp--~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
.+..+.+|| .-+.++..+.+|+|+|||..+|..++.........-..+++.|.. ++|.
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg-~~la 186 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS-LLLA 186 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS-CEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC-CEEE
Confidence 367899999 888888899999999999999988766544443322455666643 3443
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=81.62 E-value=3.9 Score=39.45 Aligned_cols=60 Identities=15% Similarity=0.038 Sum_probs=42.6
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+.|++.+.+|.|+|||..++.......+......| .+.+.|....++..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 159 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEE
Confidence 3678999999999999999999999999998754444555444454 45666655555443
No 61
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.48 E-value=4.9 Score=38.39 Aligned_cols=38 Identities=21% Similarity=0.110 Sum_probs=32.9
Q ss_pred cceeeeecC--CcEEEEEeecCeEEEEeccccceeeeecc
Q psy13379 29 PDSVIYHPN--LNILIVLSRNAECIVVDINSGCVLRKCAF 66 (828)
Q Consensus 29 ~~~i~Yhp~--LNviL~~~~~g~v~V~D~nSgviL~~~~l 66 (828)
+..+.++|. -+.|+..+.+|.|+|||..++..++...+
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 678999999 88999999999999999999987776543
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=81.46 E-value=4.1 Score=39.88 Aligned_cols=56 Identities=18% Similarity=0.320 Sum_probs=41.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCcee-EEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~~~~~ 85 (828)
+..+.++|.-+.++..+.+|.|+|||..+|..+++..... ...+. ..+-|....|+
T Consensus 152 v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 208 (312)
T 4ery_A 152 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYIL 208 (312)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEE
Confidence 5678999999999999999999999999998887654333 22343 45555544433
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=81.03 E-value=3.1 Score=40.67 Aligned_cols=59 Identities=8% Similarity=0.049 Sum_probs=42.3
Q ss_pred ecceeeeecCC----cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNL----NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~L----NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.. +.|++.+.+|.|+|||+++|..++...- +.+.-..+.+.|..+++|++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTTEEEE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCCEEEE
Confidence 36788999984 4788888999999999999998877542 22222556677745555544
No 64
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.80 E-value=3.2 Score=40.57 Aligned_cols=57 Identities=11% Similarity=0.091 Sum_probs=42.2
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
.+..+.++|.-+.|+..+.+|.|+|||+++|..+++..-.+ ...|...- |....|+.
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h-~~~v~~~~-~~~~~l~s 309 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN-EDSVVKIA-CSDNILCL 309 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCS-SSEEEEEE-ECSSEEEE
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhccc-CCCceEec-CCCCeEEE
Confidence 46789999999999999999999999999999988754331 33454444 55544443
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=80.76 E-value=4 Score=41.35 Aligned_cols=57 Identities=16% Similarity=0.146 Sum_probs=42.9
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
.+..+.++|.-+.|+..+.+|.|+|||+.+|..+++..- +.+.-..+.+.|....++
T Consensus 141 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~ 197 (420)
T 3vl1_A 141 EITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-HRATVTDIAIIDRGRNVL 197 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-CSSCEEEEEEETTTTEEE
T ss_pred ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-CCCcEEEEEEcCCCCEEE
Confidence 367899999999999999999999999999988876532 222225567777655444
No 66
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=80.74 E-value=2.7 Score=43.36 Aligned_cols=59 Identities=14% Similarity=0.171 Sum_probs=42.4
Q ss_pred cceeeeecCC-cEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNL-NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
+..+.++|.- ++++..+.+|+|+|||+.+|..+++......+.. ..+.+.|..+++|++
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence 5678888876 4566677789999999999998887666555544 556778877777765
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=80.69 E-value=4 Score=40.75 Aligned_cols=59 Identities=7% Similarity=-0.053 Sum_probs=43.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccc--------------------eeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGC--------------------VLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgv--------------------iL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
+..+.++|.-+.|++.+.+|.|+|||+.++. +++.......+.. ..+.+.|....|+..
T Consensus 333 i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 333 IFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEE
Confidence 5688999999999999999999999999998 7766655443324 555666665555443
No 68
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=80.46 E-value=3.5 Score=42.24 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=42.6
Q ss_pred cceeeeecCC-cEEEEEeecCeEEEEeccccceeeeec-ccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNL-NILIVLSRNAECIVVDINSGCVLRKCA-FAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgviL~~~~-ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+..+.+||.- |+|+..+.+|.|+|||+.+|..+++.. ..+.+.-..+.+.|....|+.
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEE
Confidence 6789999997 799999999999999999998888764 223332345566665544443
No 69
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=80.34 E-value=3.1 Score=42.76 Aligned_cols=40 Identities=20% Similarity=0.272 Sum_probs=35.5
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAE 68 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~ 68 (828)
+.++.++|.-+.|+..+.+|+|+|||..+|..++.+...+
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc
Confidence 6789999999999999999999999999999888765543
No 70
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=79.98 E-value=3.6 Score=39.56 Aligned_cols=51 Identities=10% Similarity=0.064 Sum_probs=37.7
Q ss_pred cceeeeecCCcEEEEEe--ecCeEEEEeccccceeeeecccCCCCcee-EEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLS--RNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~--~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~ 81 (828)
+..+.++|.-+.+++.+ .+|.|+|||..+|..+++..- +. ..|. +++-|..
T Consensus 243 v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-H~-~~V~~l~~spdg 296 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-HT-SRVLSLTMSPDG 296 (318)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC-CS-SCEEEEEECTTS
T ss_pred eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC-CC-CCEEEEEEcCCC
Confidence 56788999999998887 689999999999999987542 22 2443 4555543
No 71
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.98 E-value=5 Score=38.80 Aligned_cols=78 Identities=14% Similarity=0.181 Sum_probs=52.8
Q ss_pred cceeeeecCCcEEEEEee-cCeEEEEeccccceeeeecccCCC----CceeEEeeCCCCeEEEEcCceeeeeecc----C
Q psy13379 29 PDSVIYHPNLNILIVLSR-NAECIVVDINSGCVLRKCAFAEEG----QPIKGAYLPSYDKVLLTDTKSVGVRSDY----N 99 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~-~g~v~V~D~nSgviL~~~~ls~~~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~----~ 99 (828)
+..+.+.|.-+.+++... +|.|.+||..+|.++++..+.+.+ ....+++-|....|++++...-..+..| +
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 115 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT 115 (337)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC
T ss_pred ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCc
Confidence 567888888777666554 679999999999999887765422 2345677788888888864322222223 5
Q ss_pred ceeeehh
Q psy13379 100 GVLLLDT 106 (828)
Q Consensus 100 ~~~ll~~ 106 (828)
.+.++|.
T Consensus 116 ~i~v~d~ 122 (337)
T 1pby_B 116 RVALYDA 122 (337)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 5666664
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=79.76 E-value=3.5 Score=40.68 Aligned_cols=56 Identities=7% Similarity=0.147 Sum_probs=40.8
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccc--eeeeecccCCCCc-eeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGC--VLRKCAFAEEGQP-IKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgv--iL~~~~ls~~~~~-~~~~~~~~~~~~~~ 86 (828)
+..+.++|.-+.|++.+.+|.|+|||..++. .+++.. +.... ..+.+.|....++.
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~ 69 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVT 69 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEE
Confidence 6789999999999999899999999999997 444443 32334 45566665544443
No 73
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=79.71 E-value=3 Score=42.77 Aligned_cols=57 Identities=14% Similarity=0.172 Sum_probs=43.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCcee-EEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~~~~~~~ 87 (828)
+..+.++|.-+.|+..+.+|.|+|||.++|.+++...-.. ..|. +++.|..+.++++
T Consensus 142 V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~--~~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHS--SEVNCVAACPGKDTIFLS 199 (357)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTCSSCEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC--CCEEEEEEccCCCceeee
Confidence 5788999999999999999999999999999888765322 2343 4566666666554
No 74
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=79.62 E-value=4.2 Score=41.06 Aligned_cols=56 Identities=14% Similarity=0.113 Sum_probs=41.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+..+.++|.-+.|+..+.+|+|+|||+.+|..+++..- +.+....+++.|....|+
T Consensus 251 v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~g~~l~ 306 (321)
T 3ow8_A 251 VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD-HQDQVWGVKYNGNGSKIV 306 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC-CCCcEEEEEECCCCCEEE
Confidence 56789999999999999999999999999998887542 222234556666544443
No 75
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=79.42 E-value=6.1 Score=38.74 Aligned_cols=58 Identities=21% Similarity=0.279 Sum_probs=46.2
Q ss_pred cceeeeecCCcEEEEEeec-CeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSRN-AECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~-g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.++|.=+.|++.... |.|.|||..+|.+++...+.. +..+.+-|....+++++.
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp EEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEET
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEEC
Confidence 4568999998887776654 899999999999998877644 355788888888888764
No 76
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.99 E-value=4 Score=42.67 Aligned_cols=57 Identities=12% Similarity=0.145 Sum_probs=41.1
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
.+.++.++|.-+.|+..+.+|+|+|||+.+|..+++..-+ ...|...-+...+++|+
T Consensus 194 ~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h--~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH--REWVRMVRPNQDGTLIA 250 (410)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECTTSSEEE
T ss_pred CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCC--CccEEEEEECCCCCEEE
Confidence 3678999999999999999999999999999888765422 22344443333444444
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=78.92 E-value=5 Score=40.20 Aligned_cols=38 Identities=8% Similarity=-0.028 Sum_probs=34.6
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeec
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCA 65 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ 65 (828)
.+..+.++|.-+.|+..+.+|.|+|||+.++..+++..
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 46789999999999999999999999999999988876
No 78
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=78.59 E-value=4.3 Score=41.76 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=42.0
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPS 80 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~ 80 (828)
.+..+.++|.-+.|+..+.+|.|+|||..+|..+++..+.+...-..+.+.|.
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccc
Confidence 46789999999999999999999999999999999887765442233445443
No 79
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=78.46 E-value=4.8 Score=41.15 Aligned_cols=57 Identities=16% Similarity=0.239 Sum_probs=41.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCC-CeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSY-DKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~-~~~~~~ 87 (828)
+..+.++|.-+.|+..+.+|+|+|||+++|..+++..-+ ...| .+.+.|+. +++|++
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH--GADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECCCSSCCEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC--CCCeEEEEEEeCCCCCEEEE
Confidence 567888999999999999999999999999988875432 2233 34566653 344443
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=78.44 E-value=3 Score=42.31 Aligned_cols=60 Identities=5% Similarity=-0.158 Sum_probs=44.5
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+.|++.+.+|.|+|||..++..+....-.+.+....+++.|....+|++
T Consensus 249 ~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 308 (420)
T 3vl1_A 249 KKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYA 308 (420)
T ss_dssp CCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEE
T ss_pred cccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEE
Confidence 356788899999999999999999999999987777644443333566677766535544
No 81
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.25 E-value=4.4 Score=41.88 Aligned_cols=57 Identities=19% Similarity=0.148 Sum_probs=44.0
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+.++.++|.-+.|+..+.+|+|+|||+.+|..+.+... +.....+.+.|..+++|++
T Consensus 168 v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--EDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--SSCEEEEEECSTTCCEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc--CCCcEEEEEECCCCCEEEE
Confidence 66889999999999999999999999999987766543 2323556777766666654
No 82
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=78.18 E-value=5.6 Score=40.87 Aligned_cols=60 Identities=12% Similarity=-0.010 Sum_probs=46.5
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
.+..+.++|.-+.|+..+.+|.|+|||..++..+.+..- +.+....+.+.|..+.++++-
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTN-HNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECC-CSSCCCEEEECTTSTTEEEEE
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecC-CcceEEEEEECCCCCCEEEEe
Confidence 467899999999999999999999999999988776432 222235677888777777764
No 83
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=77.95 E-value=3.2 Score=41.24 Aligned_cols=60 Identities=5% Similarity=0.057 Sum_probs=43.2
Q ss_pred ecceeeeec-CCcEEEEEeecCeEEEEeccccceeeeeccc------------CCCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHP-NLNILIVLSRNAECIVVDINSGCVLRKCAFA------------EEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSgviL~~~~ls------------~~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++| .-+.|+..+.+|.|+|||..++...+..... +.+.-..+.+.|..+++|++
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 117 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTS 117 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEE
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEE
Confidence 367899999 8888888899999999999998777665421 22223566777755544443
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=77.88 E-value=4.9 Score=40.42 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=45.4
Q ss_pred ecceeeeec-CCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 28 DPDSVIYHP-NLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 28 ~~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
.+..+.++| .-+.|+..+.+|.|+|||..+|..+++..-.. +....+++.|...++|++-
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG-NWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS-SCCCCEEECTTCTTEEEEC
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC-CceEEEEECCCCCCEEEEE
Confidence 467899999 88888889999999999999999888765332 2235667777665666553
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=77.80 E-value=4.5 Score=38.63 Aligned_cols=58 Identities=9% Similarity=0.173 Sum_probs=40.0
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccc----eeeeecccCCCCc-eeEEeeCC-CCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGC----VLRKCAFAEEGQP-IKGAYLPS-YDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgv----iL~~~~ls~~~~~-~~~~~~~~-~~~~~~~ 87 (828)
.+..+.|+|.-+.|+..+.+|.|+|||..++. +++. +.+.... ..+.+.|. .+++|++
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~d~~~l~s 76 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDS--WRAHDSSIVAIDWASPEYGRIIAS 76 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEE--EECCSSCEEEEEECCGGGCSEEEE
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecce--eccCCCcEEEEEEcCCCCCCEEEE
Confidence 37789999999999999999999999999763 3332 3322334 45566675 3444443
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=77.73 E-value=2.8 Score=40.93 Aligned_cols=60 Identities=18% Similarity=0.190 Sum_probs=42.7
Q ss_pred ecceeeeec---CCcEEEEEeecCeEEEEeccccceeeeecc---cCCCCc-eeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHP---NLNILIVLSRNAECIVVDINSGCVLRKCAF---AEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp---~LNviL~~~~~g~v~V~D~nSgviL~~~~l---s~~~~~-~~~~~~~~~~~~~~~ 87 (828)
.+.++.++| .-+.|++.+.+|.|+|||..++..++...+ .+.... ..+.+.|....+|++
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 277 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLT 277 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEE
Confidence 467899999 889999999999999999999987766542 122334 445566654435554
No 87
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=77.56 E-value=13 Score=38.94 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=42.7
Q ss_pred eeecceeeeecCCcEEEEEe-ecCeEEEEec--ccc---ceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 26 VRDPDSVIYHPNLNILIVLS-RNAECIVVDI--NSG---CVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 26 ~~~~~~i~Yhp~LNviL~~~-~~g~v~V~D~--nSg---viL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
...+..|.++|.-+.|++.+ .+|.|+|||+ .++ .++++.... +....+.+.| +.++++
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~--~~v~~~~~~~--~~~~v~ 370 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP--YNVISLSAHN--DEFQVT 370 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS--SCEEEEEEET--TEEEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC--CceEEEEecC--CcEEEE
Confidence 34567899999999999888 8999999999 666 555555443 3346777878 455554
No 88
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.24 E-value=4.6 Score=39.68 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=39.5
Q ss_pred ecceeeeecC--CcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCC
Q psy13379 28 DPDSVIYHPN--LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPS 80 (828)
Q Consensus 28 ~~~~i~Yhp~--LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~ 80 (828)
.+..+.++|. -+.+++.+.+|.|+|||..++.......+.+.... ..+.+.|.
T Consensus 103 ~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 103 SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 3678899999 89999999999999999998854444444443334 55667774
No 89
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=77.16 E-value=4.4 Score=40.89 Aligned_cols=51 Identities=22% Similarity=0.274 Sum_probs=38.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~ 81 (828)
+.++.++|.-+.|+..+.+|.|+|||+.+|.++++.. +....| .+++-|..
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spd~ 218 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE--GHAMPIRSLTFSPDS 218 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC--CCSSCCCEEEECTTS
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc--ccCCceeEEEEcCCC
Confidence 5678999999999999999999999999999887643 222233 34555543
No 90
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=77.02 E-value=5.3 Score=40.28 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=38.8
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSYD 82 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~~ 82 (828)
+..+.++|.-+.++..+.+|.|+|||..+|..+++..-. ...| .+.+.|...
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h--~~~v~~v~~~p~~~ 239 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH--ESDINAICFFPNGN 239 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC--SSCEEEEEECTTSS
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC--cCCEEEEEEcCCCC
Confidence 568899999999999999999999999999888765322 2233 345555443
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=75.99 E-value=6.9 Score=39.16 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=34.4
Q ss_pred ecceeeeecCCcEEEEEeec---CeEEEEeccccceeeeecc
Q psy13379 28 DPDSVIYHPNLNILIVLSRN---AECIVVDINSGCVLRKCAF 66 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~---g~v~V~D~nSgviL~~~~l 66 (828)
.+..+.++|.-+.|++.+.+ |.|+|||..++.++++...
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~ 276 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 276 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceecc
Confidence 36789999999999999999 9999999999988887654
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=75.60 E-value=5 Score=44.79 Aligned_cols=58 Identities=9% Similarity=0.193 Sum_probs=43.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.+||.-+.|++.+.+|.|+|||+.+|..+++...+ ++.-..+.+.|....|+..
T Consensus 16 v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~ 73 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT-ETPVRAGKFIARKNWIIVG 73 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC-SSCEEEEEEEGGGTEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC-CCcEEEEEEeCCCCEEEEE
Confidence 678999999999999999999999999999988876532 2222445666665555544
No 93
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=75.54 E-value=6.1 Score=39.83 Aligned_cols=58 Identities=16% Similarity=0.232 Sum_probs=41.0
Q ss_pred ecceeeeecCCc-EEEEEeecCeEEEEeccc----cceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLN-ILIVLSRNAECIVVDINS----GCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LN-viL~~~~~g~v~V~D~nS----gviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.-+ +++..+.+|.|+|||..+ +.+++.. .+.+..-.+.+.|..++.|++
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~ 268 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLT 268 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEE
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEE
Confidence 367899999988 888888899999999998 6676665 333323455666634444443
No 94
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=75.13 E-value=6.5 Score=40.17 Aligned_cols=38 Identities=24% Similarity=0.317 Sum_probs=32.3
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeec
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCA 65 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ 65 (828)
.+..+.++|.-+.|+..+.+|+|+|||..++..+....
T Consensus 242 ~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~ 279 (354)
T 2pbi_B 242 DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYS 279 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 36789999999999999999999999999886665443
No 95
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=74.87 E-value=5.3 Score=40.48 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=39.7
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYD 82 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~ 82 (828)
.+..+.++|.-+.|+..+.+|.|+|||..++.......+.+-... ..++|-|...
T Consensus 152 ~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~ 207 (345)
T 3fm0_A 152 DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ 207 (345)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS
T ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC
Confidence 367899999999999999999999999998865444444443334 4455555443
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=74.73 E-value=5.9 Score=40.72 Aligned_cols=59 Identities=10% Similarity=0.148 Sum_probs=44.8
Q ss_pred ecceeeeecCCcEEEEEe--ecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEE
Q psy13379 28 DPDSVIYHPNLNILIVLS--RNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLL 86 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~--~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~ 86 (828)
.+..+.++|.-+.|++.+ .+|.|+|||..++...+...+.+.... ..+.+-|....|+.
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEE
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEE
Confidence 378899999999998876 799999999999988887777655555 45566665544443
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=74.49 E-value=6.8 Score=37.42 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=41.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.+ |.-+.|+..+.+|.|+|||.+++.+++...-+ .+.-..+.+.|....++..
T Consensus 21 v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 77 (313)
T 3odt_A 21 VRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-QGFLNSVCYDSEKELLLFG 77 (313)
T ss_dssp EEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred cEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-CccEEEEEECCCCCEEEEe
Confidence 567778 88899999999999999999999877765543 2223556677765555443
No 98
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=74.06 E-value=9.2 Score=38.40 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=45.6
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+..+.++|.-+.|++.. .+|.|+|||..+|.+++...... ....+++.|....|+++.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~ 92 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTN 92 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEE
Confidence 57889999988876655 78999999999999988766554 335677888877787774
No 99
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=73.80 E-value=7.3 Score=40.22 Aligned_cols=57 Identities=21% Similarity=0.187 Sum_probs=42.5
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+.++.++|.-+.|+..+.+|.|+|||+.+|.+++...- +.+.-..+.|.|..+.|+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s 182 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVS 182 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEE
Confidence 67899999999999999999999999999987766432 2222245667776655543
No 100
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=73.75 E-value=12 Score=39.17 Aligned_cols=57 Identities=12% Similarity=-0.002 Sum_probs=37.6
Q ss_pred cceeeeec-CCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEE
Q psy13379 29 PDSVIYHP-NLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~ 85 (828)
+..|.++| +-|.|+..+.+|+|+|||+.++.+............ ..+.+.|....|+
T Consensus 167 V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVV 225 (435)
T ss_dssp CCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEE
Confidence 67899998 467888888999999999987765433333322222 3455666544443
No 101
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=73.52 E-value=8.9 Score=38.56 Aligned_cols=56 Identities=13% Similarity=0.169 Sum_probs=40.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+..+.++|.-+.|+..+.+|+|+|||+.+|..+++..- +.+.-..+++.|....|+
T Consensus 79 V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~l~ 134 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNRQIL 134 (343)
T ss_dssp EEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTTEEE
T ss_pred eEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCCEEE
Confidence 56788999988888888999999999999988876542 222224456666554443
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=73.28 E-value=9.5 Score=38.87 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=30.0
Q ss_pred ecceeeeecCC-cEEEEEeecCeEEEEeccccce
Q psy13379 28 DPDSVIYHPNL-NILIVLSRNAECIVVDINSGCV 60 (828)
Q Consensus 28 ~~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgvi 60 (828)
.+..+.++|.- +.|+..+.+|.|+|||..+|..
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 36789999998 9999999999999999999886
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=72.80 E-value=12 Score=38.17 Aligned_cols=35 Identities=14% Similarity=0.057 Sum_probs=30.2
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceee
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLR 62 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~ 62 (828)
+..++.++|.-+.|+..+.+|.|+|||.++|.++.
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 34458999999999999999999999999997764
No 104
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=72.58 E-value=6.8 Score=39.12 Aligned_cols=30 Identities=20% Similarity=0.191 Sum_probs=26.9
Q ss_pred eecceeeeecCCcEEEEEeecCeEEEEecc
Q psy13379 27 RDPDSVIYHPNLNILIVLSRNAECIVVDIN 56 (828)
Q Consensus 27 ~~~~~i~Yhp~LNviL~~~~~g~v~V~D~n 56 (828)
..+..+.++|.-+.|+..+.+|.|+|||++
T Consensus 147 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp SCEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred CCeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 347789999999999999999999999996
No 105
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=72.51 E-value=5.7 Score=41.64 Aligned_cols=57 Identities=14% Similarity=0.158 Sum_probs=42.0
Q ss_pred cceeeeecC---CcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPN---LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~---LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..+.++|. -+.|+..+.+|.|+|||+.+|..++.....+.+ .|...-+. .++.|++
T Consensus 198 v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-~v~~~~~s-d~~~l~s 257 (450)
T 2vdu_B 198 LTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-FVSSICCG-KDYLLLS 257 (450)
T ss_dssp EEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-CEEEEEEC-STTEEEE
T ss_pred eEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-ceEEEEEC-CCCEEEE
Confidence 678899998 778888899999999999999888775545543 34444344 5555554
No 106
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=72.46 E-value=5.3 Score=41.04 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=42.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKV 84 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~ 84 (828)
+..+.++|.-+.|+..+.+|+|+|||+.+|..+++...+.. ....++|.|....|
T Consensus 69 V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~-~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 69 VYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP-WVMECAFAPNGQSV 123 (380)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT-TCCCCEECTTSSEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC-CEEEEEECCCCCEE
Confidence 67889999999999999999999999999988877654432 12556777765443
No 107
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=72.05 E-value=4.9 Score=39.94 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=39.6
Q ss_pred ecceeeeec-CCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCC
Q psy13379 28 DPDSVIYHP-NLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSY 81 (828)
Q Consensus 28 ~~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~ 81 (828)
.+..+.++| .-+.++..+.+|.|+|||..+|..++...... ......+.|..
T Consensus 101 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~ 153 (408)
T 4a11_B 101 SVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE--TVYSHHMSPVS 153 (408)
T ss_dssp CEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSS--CEEEEEECSSC
T ss_pred cEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCC--ceeeeEeecCC
Confidence 467899999 77788888889999999999999888876443 22445566643
No 108
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=71.97 E-value=4.7 Score=45.01 Aligned_cols=57 Identities=19% Similarity=0.165 Sum_probs=44.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+..+.++|.-+.|+..+.+|.|+|||.++|..+++...... ....+++.|...++++
T Consensus 231 v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~ 287 (814)
T 3mkq_A 231 VSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLE-RSWCIATHPTGRKNYI 287 (814)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSS-SEEEEEECTTCGGGEE
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCC-cEEEEEEccCCCceEE
Confidence 67889999999999999999999999999999887665432 2255666776665433
No 109
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=71.95 E-value=5.8 Score=40.73 Aligned_cols=58 Identities=16% Similarity=0.203 Sum_probs=40.5
Q ss_pred cceeeeec-CCcEEEEEeecCeEEEEeccc---cceee-eecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHP-NLNILIVLSRNAECIVVDINS---GCVLR-KCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp-~LNviL~~~~~g~v~V~D~nS---gviL~-~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+..|.++| .-+.|+..+.+|.|+|||..+ |..++ ...+.+.+.-..+++.|..+.++.
T Consensus 66 V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 128 (437)
T 3gre_A 66 ITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAV 128 (437)
T ss_dssp EEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEE
T ss_pred eEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEE
Confidence 67899999 888888889999999999998 76443 233344443355666665554443
No 110
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=71.86 E-value=14 Score=35.18 Aligned_cols=53 Identities=8% Similarity=0.095 Sum_probs=39.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~~~~~ 85 (828)
+..+.++|.- .|+..+.+|.|+|||+.+|.+++...... ..| .+.+.|.. +++
T Consensus 228 i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~--~~i~~~~~~~~~-~~~ 281 (313)
T 3odt_A 228 VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPA--ISIWSVDCMSNG-DII 281 (313)
T ss_dssp EEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSS--SCEEEEEECTTS-CEE
T ss_pred EEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccC--ceEEEEEEccCC-CEE
Confidence 5688899886 58888999999999999999888876543 244 44455544 444
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=71.42 E-value=7.8 Score=38.03 Aligned_cols=57 Identities=7% Similarity=0.137 Sum_probs=38.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEecc--ccceeeeecccCCCCce-eEEeeCCC-CeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDIN--SGCVLRKCAFAEEGQPI-KGAYLPSY-DKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~n--SgviL~~~~ls~~~~~~-~~~~~~~~-~~~~~~ 87 (828)
+..+.++|.-+.|+..+.+|.|+|||.. ++.+++. +.+....| .+.|.|.. +++|++
T Consensus 14 v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s 74 (379)
T 3jrp_A 14 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDT--LTGHEGPVWRVDWAHPKFGTILAS 74 (379)
T ss_dssp EEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE--ECCCSSCEEEEEECCGGGCSEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeE--ecCCCCcEEEEEeCCCCCCCEEEE
Confidence 6788999999998888899999999998 5555544 33333344 44555552 344443
No 112
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=70.86 E-value=8.8 Score=38.83 Aligned_cols=57 Identities=18% Similarity=0.084 Sum_probs=39.5
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeE
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKV 84 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~ 84 (828)
.+..+.++|.-+.|+..+.+|+|+|||.+++.......|.+-... ..++|.|....|
T Consensus 63 ~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l 120 (345)
T 3fm0_A 63 TVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLL 120 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred cEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEE
Confidence 367899999999999999999999999998854333344433334 455666654433
No 113
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=70.64 E-value=9.5 Score=38.15 Aligned_cols=53 Identities=6% Similarity=-0.017 Sum_probs=38.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYD 82 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~ 82 (828)
+..+.+.|.-+.|+..+.+|+|+|||+.+|..+++..- +.+.-..+.+.|...
T Consensus 68 v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~ 120 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKAS 120 (319)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCC
Confidence 55678899999999999999999999999988876542 222223445555443
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=69.98 E-value=9.1 Score=37.30 Aligned_cols=56 Identities=11% Similarity=0.211 Sum_probs=40.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccc----eeeeecccCCCCceeEEeeCCCC-eEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGC----VLRKCAFAEEGQPIKGAYLPSYD-KVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgv----iL~~~~ls~~~~~~~~~~~~~~~-~~~~ 86 (828)
+..+.++|.-+.|++.+.+|.|+|||.+++. +.... .+.+.-..+.+.|... .|+.
T Consensus 14 v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~ 74 (342)
T 1yfq_A 14 ISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee--ecCCceEEEEECCCCCcEEEE
Confidence 6789999999999999999999999999887 43332 3333235566777644 4444
No 115
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=68.65 E-value=12 Score=36.53 Aligned_cols=55 Identities=18% Similarity=0.292 Sum_probs=40.6
Q ss_pred eecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 34 YHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 34 Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
..++-++++..+.+|+|+|||..+|.++++..+.........++.|....++++.
T Consensus 7 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~ 61 (349)
T 1jmx_B 7 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLN 61 (349)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEE
T ss_pred ccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEe
Confidence 3455556666778899999999999999887765432345667778777787775
No 116
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=68.62 E-value=12 Score=36.38 Aligned_cols=59 Identities=12% Similarity=0.198 Sum_probs=36.3
Q ss_pred cceeeeecCC-cEEEEEeecCeEEEEeccccceee---eecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNL-NILIVLSRNAECIVVDINSGCVLR---KCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgviL~---~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..|.++|.- +.|+-.+.+|+|+|||++++.... ...|.+-...|...-+...++.|++
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 6788999975 566667778999999998653221 1223333334555544444555544
No 117
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=68.52 E-value=9.2 Score=40.59 Aligned_cols=58 Identities=17% Similarity=0.126 Sum_probs=42.0
Q ss_pred ecceeeeecC-CcEEEEEeecCeEEEEeccccceeeeecc---cCCCCceeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPN-LNILIVLSRNAECIVVDINSGCVLRKCAF---AEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~-LNviL~~~~~g~v~V~D~nSgviL~~~~l---s~~~~~~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|. -+.|+..+.+|.|+|||..+|..+++..- .+.+ .|...-+. .++.|++
T Consensus 208 ~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-~v~~~~~~-~~~~l~~ 269 (615)
T 1pgu_A 208 FVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQG-GIFALSWL-DSQKFAT 269 (615)
T ss_dssp CEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCS-CEEEEEES-SSSEEEE
T ss_pred eEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCC-ceEEEEEc-CCCEEEE
Confidence 3678999999 89999999999999999999998887633 3333 44444333 5554444
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=67.50 E-value=10 Score=39.57 Aligned_cols=58 Identities=12% Similarity=0.146 Sum_probs=40.6
Q ss_pred cceeeeec-CCcEEEEEeecCeEEEEecccc---ceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHP-NLNILIVLSRNAECIVVDINSG---CVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp-~LNviL~~~~~g~v~V~D~nSg---viL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+..|.++| +-++++..+.+|.|+|||..++ .++.... .+.+..-.+.+.|....+|++
T Consensus 234 v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~t 295 (430)
T 2xyi_A 234 VEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILAT 295 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEE
T ss_pred EeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEE
Confidence 67789999 7788888889999999999987 4544443 222222456677766656655
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=67.46 E-value=23 Score=36.39 Aligned_cols=56 Identities=11% Similarity=-0.043 Sum_probs=38.8
Q ss_pred ecceeeeecCCcEEEEEee--cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 28 DPDSVIYHPNLNILIVLSR--NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~--~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
.++.+.+.|.=+.+.+.|. +|+|+|||+++|..+.+.. +.+....++|-|....++
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~~l~ 192 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGKVVA 192 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSSEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCceEE
Confidence 3567888998887777774 6899999999998887653 333234556666544433
No 120
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=66.74 E-value=4.7 Score=40.30 Aligned_cols=57 Identities=4% Similarity=0.119 Sum_probs=39.5
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~ 85 (828)
+..+.|+|.-+.|+..+.+|.|+|||..++.......+.+.... ..+++.|....|+
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 71 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIV 71 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEE
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEE
Confidence 67899999999888888999999999999843222333333334 4556666654444
No 121
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=66.74 E-value=11 Score=39.04 Aligned_cols=51 Identities=10% Similarity=0.117 Sum_probs=38.0
Q ss_pred cceeeeecCCcEEEEEe--ecCeEEEEeccccceeeeecccCCCCce-eEEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLS--RNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~--~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~ 81 (828)
+.++++.|.-+.|++.+ .+|.|+|||..+|..+++.. .+.+ .| .+++-|..
T Consensus 323 v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~-gH~~-~V~~l~~spdg 376 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK-GHTS-RVLSLTMSPDG 376 (420)
T ss_dssp EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC-CCSS-CEEEEEECTTS
T ss_pred eeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc-CCCC-CEEEEEEcCCC
Confidence 57889999999999887 57999999999999988754 2222 44 44555543
No 122
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=66.73 E-value=12 Score=39.61 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=40.4
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLP 79 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~ 79 (828)
.+..+.++|.-+.|+..+.+|.|+|||+.+|..+++..-.+.+.-..+++.|
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp 541 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKP 541 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECC
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcC
Confidence 4678999999999999999999999999999988774332333335566667
No 123
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=65.43 E-value=18 Score=36.01 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=39.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+..+.++|.- .++..+.+|.|+|||..+|.+++...... .....+.+.|....|+
T Consensus 292 i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~ 346 (425)
T 1r5m_A 292 IVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDG-VPIFAGRISQDGQKYA 346 (425)
T ss_dssp EEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTT-CCEEEEEECTTSSEEE
T ss_pred EEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCC-ccEEEEEEcCCCCEEE
Confidence 5788999977 88888999999999999999888765432 2124455666544443
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=65.30 E-value=17 Score=36.38 Aligned_cols=60 Identities=22% Similarity=0.288 Sum_probs=44.2
Q ss_pred ecceeeeecCCcEEEEEee-cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 28 DPDSVIYHPNLNILIVLSR-NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~-~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
.+..+.++|.-+.|++... +|.|+|||+++|.+++...... .....++.|....++++.+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~ 135 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK--SPLGLALSPDGKKLYVTNN 135 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEET
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC--CcceEEECCCCCEEEEEeC
Confidence 4678899998887776664 5999999999999887765432 2355677777777767643
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=65.05 E-value=14 Score=37.73 Aligned_cols=60 Identities=13% Similarity=0.071 Sum_probs=43.4
Q ss_pred ecceeeeecCCcEEEEE-eecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 28 DPDSVIYHPNLNILIVL-SRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~-~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
.+..+.++|.-+.+++. +.+|.|+|||.++|.+++.... ......+++-|....|+++..
T Consensus 304 ~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 304 NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV--FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEEC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC--CCCCCeEEEcCCCCEEEEEec
Confidence 35678999998877666 7889999999999988876543 222355666676666666654
No 126
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=63.94 E-value=17 Score=36.61 Aligned_cols=60 Identities=18% Similarity=0.312 Sum_probs=44.1
Q ss_pred cceeeeecCC-cEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNL-NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~L-NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~~~~ 90 (828)
+..|.+.|.. +++..-+.++.|++||.++|.++++......+.+ ....|-| +.++..|+.
T Consensus 198 p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~ 259 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP--GFLFAVNGK 259 (329)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET--TEEEEEECC
T ss_pred CcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC--CEEEEeCCC
Confidence 6788999984 4444445688999999999999988766555544 5566777 777777765
No 127
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=63.32 E-value=14 Score=43.98 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=39.4
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~ 81 (828)
+..+.++|.-+.|+..+.+|.|+|||+.+|..+++..-.. +....+.+.|..
T Consensus 660 v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~ 711 (1249)
T 3sfz_A 660 VLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-EQVNCCHFTNKS 711 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECSSS
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-CcEEEEEEecCC
Confidence 5678999999999999999999999999999888765322 222445555643
No 128
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=63.17 E-value=17 Score=37.56 Aligned_cols=55 Identities=11% Similarity=0.138 Sum_probs=37.0
Q ss_pred ceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 30 DSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 30 ~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
..+.++|.-+. |+.+++|.|+|||..+|.++++....+.+....++|- .++++++
T Consensus 395 ~~~~~~~~~~~-l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~ 449 (464)
T 3v7d_B 395 AITTFYVSDNI-LVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAA 449 (464)
T ss_dssp CEEEEEECSSE-EEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEE
T ss_pred cEEEEEeCCCE-EEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEE
Confidence 44566666664 4555699999999999999998776664433555552 4455444
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=63.00 E-value=22 Score=36.14 Aligned_cols=61 Identities=10% Similarity=0.012 Sum_probs=43.7
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
.+..+.+.|.-++++..+.+|.|+|||..+|..+++... +......+++.|....++++..
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~ 231 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNW 231 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEET
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEec
Confidence 345677777777777777789999999999988877652 2222355677787777777753
No 130
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=62.73 E-value=14 Score=35.77 Aligned_cols=50 Identities=18% Similarity=0.240 Sum_probs=38.1
Q ss_pred EEEEEeecCeEEEEeccccceeeeecccCCC-CceeEEeeCCCCeEEEEcC
Q psy13379 40 ILIVLSRNAECIVVDINSGCVLRKCAFAEEG-QPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 40 viL~~~~~g~v~V~D~nSgviL~~~~ls~~~-~~~~~~~~~~~~~~~~~~~ 89 (828)
.++..+.+|.|.|||..+|.++++..+.+.. .+..+++-|....+++++.
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 53 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN 53 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC
Confidence 4666678999999999999999988766532 2455677787778888764
No 131
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=62.14 E-value=18 Score=35.16 Aligned_cols=61 Identities=16% Similarity=0.185 Sum_probs=44.2
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccceeeeecccCC----CC-ceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCVLRKCAFAEE----GQ-PIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgviL~~~~ls~~----~~-~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.+.|.-+.+++.. .+|.|.|||..+|.+++...+... +. .-.+++-|....|++++.
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 111 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN 111 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc
Confidence 56788899888766655 578999999999998887766542 11 234567777777777764
No 132
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=61.78 E-value=17 Score=40.19 Aligned_cols=54 Identities=15% Similarity=0.155 Sum_probs=40.0
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecc------cCCCCceeEEeeCCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAF------AEEGQPIKGAYLPSYD 82 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~l------s~~~~~~~~~~~~~~~ 82 (828)
+.++.|+|.-+.|+..+.+|+|+|||+.+|..++...- .+.+....+++-|...
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 67899999999999899999999999999987765421 3433334556666543
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=61.75 E-value=27 Score=33.78 Aligned_cols=60 Identities=13% Similarity=0.185 Sum_probs=41.9
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccc-cceeeee----cccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINS-GCVLRKC----AFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nS-gviL~~~----~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+..+.+.|.-+.|++.+ .+|.|+|||.++ |.+.... ..........+.+-|....+++++
T Consensus 131 ~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp BCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 66788999988887777 789999999998 8664422 222222234566777777777775
No 134
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=60.70 E-value=13 Score=39.81 Aligned_cols=57 Identities=7% Similarity=0.090 Sum_probs=38.5
Q ss_pred ecceeeeecC-CcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 28 DPDSVIYHPN-LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 28 ~~~~i~Yhp~-LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
.+..+.+||. -++|+..+.+|+|+|||+.++..+... ..+......++|-|....|+
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~-~~~~~~v~~v~wspdg~~la 208 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT-LPSTVAVTSVCWSPKGKQLA 208 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE-ECGGGCEEEEEECTTSSCEE
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec-cCCCCceeEEEEcCCCCEEE
Confidence 3678999998 678888999999999999998554332 22222224556666643333
No 135
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=60.37 E-value=9.8 Score=37.98 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=27.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccce
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCV 60 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgvi 60 (828)
+..+.++|.-+.|+..+.+|+|+|||+++|..
T Consensus 16 V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~ 47 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ 47 (316)
T ss_dssp EEEEEECGGGCEEEEEETTTEEEEEEEETTEE
T ss_pred EEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 56788999888888888999999999998753
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=60.22 E-value=22 Score=34.33 Aligned_cols=61 Identities=15% Similarity=0.071 Sum_probs=43.0
Q ss_pred cceeeeecCCcEEEEEeec-CeEEEEecc--ccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSRN-AECIVVDIN--SGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~-g~v~V~D~n--SgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.+.|.-+.|++.+.. |.|.|||++ +|.......+...+....+++-|....|++++.
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 103 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY 103 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec
Confidence 5678899998888777776 999999998 776544333333333456677787777877753
No 137
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=60.03 E-value=27 Score=33.79 Aligned_cols=61 Identities=13% Similarity=0.198 Sum_probs=40.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
+..|...+.=|+.+....++.|.+||.++|.+++...+.. .....+++-|....|++++..
T Consensus 228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS-SCEEEEEECTTSSEEEEEETT
T ss_pred CCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCC-CCceeEEECCCCCEEEEEeCC
Confidence 4556777765655544568899999999998887766542 223444554555558888765
No 138
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=59.39 E-value=25 Score=35.72 Aligned_cols=60 Identities=12% Similarity=0.150 Sum_probs=43.8
Q ss_pred cceeeeecCCcEEEEEeec-----------CeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSRN-----------AECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~-----------g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..|.+.|.=+ +++.+.. +.|.|+|..++.++++..+.....+-..++-|..++++++++
T Consensus 174 p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 174 PTSLVMDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp BCCCEECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS
T ss_pred ccceEEcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc
Confidence 45677777645 5555542 689999999999998877654333466778888889999886
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=59.17 E-value=22 Score=39.54 Aligned_cols=72 Identities=17% Similarity=0.120 Sum_probs=51.3
Q ss_pred ceeeeecCCcEEEEEe-------ecCeEEEEeccccceeeeec-------ccCCCCc-eeEEeeCCCCeEEEEc------
Q psy13379 30 DSVIYHPNLNILIVLS-------RNAECIVVDINSGCVLRKCA-------FAEEGQP-IKGAYLPSYDKVLLTD------ 88 (828)
Q Consensus 30 ~~i~Yhp~LNviL~~~-------~~g~v~V~D~nSgviL~~~~-------ls~~~~~-~~~~~~~~~~~~~~~~------ 88 (828)
..|..||.=+.|.+-+ .+++|.|||++++..+.+.. |+..+.+ ....|.|..+.|+++.
T Consensus 424 ~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~ 503 (543)
T 1nir_A 424 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKND 503 (543)
T ss_dssp CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTS
T ss_pred eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCC
Confidence 4578999988888776 26799999999998773332 3443444 8999999999999872
Q ss_pred CceeeeeeccCce
Q psy13379 89 TKSVGVRSDYNGV 101 (828)
Q Consensus 89 ~~~~~~r~~~~~~ 101 (828)
...|-|.-+-.|-
T Consensus 504 ~~~i~v~D~~t~~ 516 (543)
T 1nir_A 504 SSALVVVDDKTLK 516 (543)
T ss_dssp CCEEEEEETTTTE
T ss_pred CCeEEEEECCCce
Confidence 2455554444443
No 140
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=58.96 E-value=17 Score=37.91 Aligned_cols=60 Identities=13% Similarity=0.234 Sum_probs=42.8
Q ss_pred ecceeeeecCCc-EEEEEeecCeEEEEeccc-cceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 28 DPDSVIYHPNLN-ILIVLSRNAECIVVDINS-GCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 28 ~~~~i~Yhp~LN-viL~~~~~g~v~V~D~nS-gviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
.+..|.++|.-+ +++..+.+|.|+|||..+ +.++++..-+ .+....+.+.|....+|++-
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h-~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESH-KDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECC-SSCEEEEEECSSCTTEEEEE
T ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecC-CCCEEEEEECCCCCCEEEEE
Confidence 367899999775 677788899999999997 5666654432 23236677888776666653
No 141
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=58.60 E-value=16 Score=38.83 Aligned_cols=54 Identities=13% Similarity=0.244 Sum_probs=38.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~~~~~~ 86 (828)
+..|.|+|.=..|...+.+|+|+|||. +|..+++-. +....| .+++.|. ++.|+
T Consensus 19 V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~--gh~~~V~~l~fspd-g~~la 73 (577)
T 2ymu_A 19 VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT--GHSSSVWGVAFSPD-GQTIA 73 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE--CCSSCEEEEEECTT-SSEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEe--CCCCCEEEEEECCC-CCEEE
Confidence 678999999888888889999999996 677777643 322344 4455554 44444
No 142
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=57.62 E-value=21 Score=36.94 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=34.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAF 66 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~l 66 (828)
+.++.++|.-+.++..+.+|.|+|||..+|..+++..-
T Consensus 313 v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 313 IYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG 350 (464)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeC
Confidence 67899999999999999999999999999998887643
No 143
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=57.35 E-value=21 Score=39.83 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=32.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeec
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCA 65 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ 65 (828)
+.++.++|.-+.|+..+.+|.|+|||..+|..+.+..
T Consensus 564 v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~ 600 (694)
T 3dm0_A 564 VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 600 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB
T ss_pred EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec
Confidence 6788999999999999999999999999998876643
No 144
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=57.29 E-value=20 Score=36.50 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=29.4
Q ss_pred eecceeeeecCCcEEEEEeecCeEEEEeccccce
Q psy13379 27 RDPDSVIYHPNLNILIVLSRNAECIVVDINSGCV 60 (828)
Q Consensus 27 ~~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgvi 60 (828)
..+.++.++|.-+.|+..+.+|+|+|||+..+..
T Consensus 241 ~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~ 274 (355)
T 3vu4_A 241 ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQD 274 (355)
T ss_dssp SCEEEEEECTTSCEEEEEETTCEEEEEESSCCSC
T ss_pred CcEEEEEECCCCCEEEEEECCCEEEEEEccCCCC
Confidence 3467899999999999999999999999987643
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=56.98 E-value=33 Score=33.49 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=42.7
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccce---eeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCV---LRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgvi---L~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.++|.=+.|++.+ .++.|.|||..+|.+ +++.. .......+++-|....+++++.
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECS
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEc
Confidence 57889999988776666 478999999999998 55443 3333355677777766777764
No 146
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=56.58 E-value=37 Score=35.11 Aligned_cols=63 Identities=17% Similarity=0.122 Sum_probs=47.6
Q ss_pred eeeecCCcEEEEEee-----------cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCceeeeeeccCc
Q psy13379 32 VIYHPNLNILIVLSR-----------NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTKSVGVRSDYNG 100 (828)
Q Consensus 32 i~Yhp~LNviL~~~~-----------~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 100 (828)
+.++|.-+.+.+... .++|.|||..++.++++-.... +..+++-|...+|+.++. |-
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spdg~~l~v~n~---------~~ 326 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQRNLMLTLDG---------GN 326 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETTTTEEEEECS---------SC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCCCCEEEEeCC---------Ce
Confidence 678998888888765 3489999999999999877665 556677787776666552 66
Q ss_pred eeeehh
Q psy13379 101 VLLLDT 106 (828)
Q Consensus 101 ~~ll~~ 106 (828)
+-++|+
T Consensus 327 v~v~D~ 332 (361)
T 2oiz_A 327 VNVYDI 332 (361)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 666664
No 147
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=56.12 E-value=22 Score=39.76 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=40.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+..+.++|.-+.|+..+.+|+|+|||+.+|..+++.. .+.+.-..+.+.|....|+
T Consensus 433 v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~ 488 (694)
T 3dm0_A 433 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIV 488 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEE
Confidence 5678999999999999999999999999998776543 2323224456666554443
No 148
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=56.01 E-value=24 Score=35.33 Aligned_cols=51 Identities=14% Similarity=0.144 Sum_probs=36.1
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEecccc--ceeeeecccCCCCc-eeEEeeCC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSG--CVLRKCAFAEEGQP-IKGAYLPS 80 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSg--viL~~~~ls~~~~~-~~~~~~~~ 80 (828)
.+..+.++|.-+.|+..+.+|+|+|||..++ ..++. +.+-... ..+.+.|.
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~--~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV--LNGHEGTVWSSDFDKT 208 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE--ECCCSSCEEEEEECCS
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEE--ccCCCCcEEEEEecCC
Confidence 3678999999999999999999999999876 33433 3322223 44556565
No 149
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=55.83 E-value=29 Score=35.93 Aligned_cols=58 Identities=3% Similarity=-0.121 Sum_probs=37.7
Q ss_pred cceeeeecCCcEEEEEee--cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSR--NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~--~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
....++||..+-+++++. +|.|+|||+.+|..+.... .+...-..++|-|....|..+
T Consensus 318 ~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 318 LLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-QLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp SSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE-ECSSCEEEEEECTTSSEEEEE
T ss_pred ceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec-CCCCcEEEEEEcCCCCEEEEE
Confidence 345678888776666654 7999999999997766543 222222456676665555443
No 150
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=54.50 E-value=21 Score=35.07 Aligned_cols=57 Identities=5% Similarity=0.148 Sum_probs=37.0
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEecccc--ceeeeecccCCCCce-eEEeeCC-CCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSG--CVLRKCAFAEEGQPI-KGAYLPS-YDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSg--viL~~~~ls~~~~~~-~~~~~~~-~~~~~~~ 87 (828)
+..+.+.|.-+.|+..+.+|+|+|||++.+ ..+++. .+-...| .+.+.|. .+++|++
T Consensus 12 V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l--~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL--TGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE--CCCSSCEEEEEECCGGGCSEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE--ccccCCeEEEEecCCCcCCEEEE
Confidence 567889999899988999999999999754 444442 2222233 4455443 3444443
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=54.09 E-value=31 Score=32.12 Aligned_cols=59 Identities=7% Similarity=-0.037 Sum_probs=39.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccc-cceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINS-GCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nS-gviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+..+.++|.-+.|++ +.+|.|+|||+.+ |.+.+.....+....-...+.|....|++..
T Consensus 44 v~~~~~spdg~~l~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLL-NSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISD 103 (297)
T ss_dssp CEEEEECTTSSEEEE-EETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEE
T ss_pred eEeeEECCCCCEEEE-EcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEE
Confidence 567888998775554 6799999999999 8776654333222223456777766666654
No 152
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=53.74 E-value=21 Score=39.35 Aligned_cols=52 Identities=12% Similarity=0.146 Sum_probs=37.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccc-cceeeeeccc-CCCCceeEEeeCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINS-GCVLRKCAFA-EEGQPIKGAYLPS 80 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nS-gviL~~~~ls-~~~~~~~~~~~~~ 80 (828)
+.++.|.|+-+.|+..+.++.|+|||+.+ |.++++..+. +.+.-..+++-|.
T Consensus 494 v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspd 547 (611)
T 1nr0_A 494 ITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPD 547 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTT
T ss_pred eEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCC
Confidence 67899999999999999999999999998 7776653444 3332234444443
No 153
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=53.55 E-value=26 Score=34.43 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=34.2
Q ss_pred cceeeeecC--CcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCC
Q psy13379 29 PDSVIYHPN--LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPS 80 (828)
Q Consensus 29 ~~~i~Yhp~--LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~ 80 (828)
+..+.++|. -+.|+..+.+|.|+|||..++.......+.+.... ..+.+.|.
T Consensus 102 v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 102 VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 678899997 57888899999999999987632222222222223 34556554
No 154
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=52.88 E-value=26 Score=41.53 Aligned_cols=56 Identities=11% Similarity=0.057 Sum_probs=40.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+..+.++|.-+.|...+.+|.|+|||+.+|..+++.. .+.+....+++.|....|+
T Consensus 618 v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~ 673 (1249)
T 3sfz_A 618 VYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK-AHEDEVLCCAFSSDDSYIA 673 (1249)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec-cCCCCEEEEEEecCCCEEE
Confidence 6678999999999999999999999999998887754 2222224455666544333
No 155
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=52.53 E-value=42 Score=33.60 Aligned_cols=51 Identities=16% Similarity=0.162 Sum_probs=35.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEec-cccceeeeecccCCCCceeEEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDI-NSGCVLRKCAFAEEGQPIKGAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~-nSgviL~~~~ls~~~~~~~~~~~~~~ 81 (828)
+..+.++|.=+.|+..+.+|.|+|||+ +.+.+++..... ..-..+++-|..
T Consensus 216 v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~sp~~ 267 (343)
T 2xzm_R 216 VNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG--STINQIAFNPKL 267 (343)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS--SCEEEEEECSSS
T ss_pred ceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC--CcEEEEEECCCC
Confidence 677899999999999999999999999 455554443221 112445565653
No 156
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=52.18 E-value=23 Score=39.40 Aligned_cols=56 Identities=9% Similarity=0.000 Sum_probs=35.6
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccc-eeeeecccCCCCceeEE--eeCCCC-eEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGC-VLRKCAFAEEGQPIKGA--YLPSYD-KVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgv-iL~~~~ls~~~~~~~~~--~~~~~~-~~~~~ 87 (828)
+.++.++|. +.|+.-+.+|+|++||+++|. +++.... + ...|... ..|..+ ++|++
T Consensus 269 v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~-H-~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 269 ITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQV-H-DSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp EEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEEC-S-SSCEEEEEEECCTTSCCEEEE
T ss_pred EEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeec-c-cccEEEEEEEcCCCCCeEEEE
Confidence 567888886 678888899999999999873 3332222 2 2245543 344444 55554
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=51.19 E-value=64 Score=30.98 Aligned_cols=61 Identities=21% Similarity=0.249 Sum_probs=38.4
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
+..|...|.=++++.-+.++.|++||.+ |..+.+....+......+..+...+++++++..
T Consensus 166 p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 166 PNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred cEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 5678888876644444568899999984 555555433221123455555556789998854
No 158
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=50.95 E-value=30 Score=35.81 Aligned_cols=34 Identities=18% Similarity=0.338 Sum_probs=28.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeee
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKC 64 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~ 64 (828)
+..+.+++ +.|+..+.+|.|+|||..+|..+++.
T Consensus 365 v~~~~~~~--~~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 365 VTCLQFNK--NFVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEEEECS--SEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEECC--CEEEEEeCCCeEEEEECCCCceeeee
Confidence 45566665 67888888999999999999988876
No 159
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=50.43 E-value=22 Score=40.69 Aligned_cols=52 Identities=6% Similarity=0.028 Sum_probs=35.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPS 80 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~ 80 (828)
+..+.|+|.-+.|+..+.+|.|+|||+.++..-....+.+....| .+.+.|.
T Consensus 12 V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~ 64 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP 64 (753)
T ss_dssp EEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT
T ss_pred eEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC
Confidence 678899999999999999999999999844333333333333344 4455565
No 160
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=50.20 E-value=56 Score=34.63 Aligned_cols=55 Identities=13% Similarity=0.171 Sum_probs=38.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCce-eEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPI-KGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~-~~~~~~~~~~~~~ 86 (828)
+..+.++|.-+.|+..+.+|+|+|||. +|..+++.. +....| .+++.|....|+.
T Consensus 60 V~~l~fspdg~~las~~~d~~i~vWd~-~~~~~~~~~--~~~~~v~~~~~s~d~~~l~~ 115 (577)
T 2ymu_A 60 VWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT--GHSSSVRGVAFSPDGQTIAS 115 (577)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEEC--CCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEE--CCCCCEEEEEECCCCCEEEE
Confidence 567899999998888889999999996 566666543 223344 4556665544443
No 161
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=50.05 E-value=29 Score=34.80 Aligned_cols=49 Identities=6% Similarity=0.093 Sum_probs=35.6
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
|+|++-+.++.|++||..+|.++.+...... ..+...++-..+++|++.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~ 54 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY 54 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC
Confidence 6777778899999999999999988776431 234444555567788743
No 162
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=49.89 E-value=35 Score=34.18 Aligned_cols=28 Identities=14% Similarity=0.169 Sum_probs=25.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEecc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDIN 56 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~n 56 (828)
+..+.++|.-+.|+..+.+|+|+|||.+
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 6789999999988888999999999994
No 163
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=49.23 E-value=32 Score=34.24 Aligned_cols=30 Identities=10% Similarity=0.288 Sum_probs=25.7
Q ss_pred cceeeeecCC----cEEEEEeecCeEEEEecccc
Q psy13379 29 PDSVIYHPNL----NILIVLSRNAECIVVDINSG 58 (828)
Q Consensus 29 ~~~i~Yhp~L----NviL~~~~~g~v~V~D~nSg 58 (828)
+..+.|+|.. +.|+..+.+|+|+|||+.++
T Consensus 215 V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~ 248 (316)
T 3bg1_A 215 VRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDA 248 (316)
T ss_dssp EEEEECCCCSSCSCCEEEEEETTCEEEEEECSST
T ss_pred eEEEEecCCCCCCCceEEEEcCCCeEEEEEccCc
Confidence 6788999986 78888889999999999863
No 164
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=48.37 E-value=33 Score=40.63 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=39.1
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+..+.++| -+.|+..+.+|+|+|||+.+|.++++.. +.+....+++-|....++.
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~s 115 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF--VPGKITSIDTDASLDWMLI 115 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE--CSSCEEEEECCTTCSEEEE
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc--CCCCEEEEEECCCCCEEEE
Confidence 67899999 3457777889999999999999988875 2222244555565555544
No 165
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=48.26 E-value=21 Score=36.91 Aligned_cols=58 Identities=9% Similarity=0.098 Sum_probs=37.6
Q ss_pred cceeeeecCC--------cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNL--------NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~L--------NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+.+|.+.|.. ++|.-.+.+++|+|||++++..+.... .+.+....++|.|....+|++
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~ 204 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY-PLSSPGISVQFRPSNPNQLIV 204 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE-ECSSCEEEEEEETTEEEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec-CCCCCcEEEEECCCCCceEEe
Confidence 5667777632 355566778999999998776544432 222334677888877665554
No 166
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=47.53 E-value=48 Score=32.26 Aligned_cols=55 Identities=7% Similarity=0.023 Sum_probs=39.2
Q ss_pred eeeeecCCcEEEEEee-cCeEEEEeccccce-eeeecccCCCCcee-EEeeCCCCeEEEE
Q psy13379 31 SVIYHPNLNILIVLSR-NAECIVVDINSGCV-LRKCAFAEEGQPIK-GAYLPSYDKVLLT 87 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~~-~g~v~V~D~nSgvi-L~~~~ls~~~~~~~-~~~~~~~~~~~~~ 87 (828)
.+.++|.=+.|++.+. ++.|.+||..+|.+ .+... ....+.. +++-|....++..
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~ 101 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ--EGQSSMADVDITPDDQFAVTV 101 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--ECSSCCCCEEECTTSSEEEEC
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc--cCCCCccceEECCCCCEEEEe
Confidence 7889999887777766 78999999999987 44433 2233455 6777776666643
No 167
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=46.59 E-value=32 Score=39.39 Aligned_cols=52 Identities=13% Similarity=0.047 Sum_probs=38.1
Q ss_pred cceeeeecC--CcEEEEEeecCeEEEEeccccceeeeecccCCCCc-eeEEeeCC
Q psy13379 29 PDSVIYHPN--LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPS 80 (828)
Q Consensus 29 ~~~i~Yhp~--LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~ 80 (828)
+..+.+.|. -+.|+..+.+|.|+|||+.+|.......+.+.... ..+.+.|.
T Consensus 56 V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~ 110 (753)
T 3jro_A 56 VWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPH 110 (753)
T ss_dssp EEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG
T ss_pred eEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCC
Confidence 677888877 78999999999999999999974444444443344 44566666
No 168
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=46.29 E-value=31 Score=40.81 Aligned_cols=50 Identities=12% Similarity=0.160 Sum_probs=37.8
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLP 79 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~ 79 (828)
.+..+.|+|.-+.|...+.+|.|+|||...+..+.. +.+.+.-..++|.|
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~--~~~~~~V~~l~fsp 68 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK--LEDRSAIKEMRFVK 68 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE--CSSCCCEEEEEEET
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE--cCCCCCEEEEEEcC
Confidence 377899999999999999999999999998766544 23333224556666
No 169
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=45.55 E-value=41 Score=34.07 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=36.3
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCC-------CCceeEEeeCCCCeEEEEc
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEE-------GQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~-------~~~~~~~~~~~~~~~~~~~ 88 (828)
+.|.+.+.+|.|..||+.+|.++-+..+... +..+........++|++..
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~ 110 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS 110 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc
Confidence 6777888899999999999999988777543 2235555555567777653
No 170
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=44.89 E-value=56 Score=36.25 Aligned_cols=39 Identities=10% Similarity=-0.075 Sum_probs=32.7
Q ss_pred ecceeeeec----CCcEEEEEee-cCeEEEEeccccceeeeecc
Q psy13379 28 DPDSVIYHP----NLNILIVLSR-NAECIVVDINSGCVLRKCAF 66 (828)
Q Consensus 28 ~~~~i~Yhp----~LNviL~~~~-~g~v~V~D~nSgviL~~~~l 66 (828)
.++++.++| .=+.+++.+. +++|.|||..++.++++-..
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 468899999 7787777763 79999999999999998655
No 171
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=44.88 E-value=70 Score=32.81 Aligned_cols=62 Identities=15% Similarity=0.224 Sum_probs=48.5
Q ss_pred ecceeeeecCCcEEEEEee-cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCce
Q psy13379 28 DPDSVIYHPNLNILIVLSR-NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTKS 91 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~-~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~ 91 (828)
++..|.|.|.-|.|.+++. ++.|..+|.+ |.++++-.+.+....=.++|+ ..+++++++.+.
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~-~~g~~~vs~E~~ 90 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYI-GDNQFVISDERD 90 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEEC-STTEEEEEETTT
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEe-CCCEEEEEECCC
Confidence 6889999999899988665 4689999998 999999988765444445777 456788887653
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=43.62 E-value=61 Score=31.82 Aligned_cols=71 Identities=3% Similarity=0.055 Sum_probs=44.3
Q ss_pred ceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCceeeeeeccCceeeeh
Q psy13379 30 DSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTKSVGVRSDYNGVLLLD 105 (828)
Q Consensus 30 ~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ll~ 105 (828)
..+.+.|.=+++++-+.+|.|.+||..+|.+.+-.. ..+..+.+..+...+++++++... ....+|+.++|
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~~~---~~~~~~i~~~d 118 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDGRLFVCYLGD---FKSTGGIFAAT 118 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTSCEEEEECTT---SSSCCEEEEEC
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCCcEEEEeCCC---CCCCceEEEEe
Confidence 567788876644445678899999999997655322 122346666666667888876532 01124565555
No 173
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=43.55 E-value=34 Score=31.80 Aligned_cols=60 Identities=12% Similarity=0.080 Sum_probs=41.6
Q ss_pred ecceeeeecCCcEEEEEeec-----------CeEEEEeccccceeeeecccCCCCc-eeEEeeCCCCeEEEE
Q psy13379 28 DPDSVIYHPNLNILIVLSRN-----------AECIVVDINSGCVLRKCAFAEEGQP-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~-----------g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~~~~~~~~~~~ 87 (828)
.+..+.++|.=+.|++.+.+ +.|++||.++|.+.+-..+.+.... ....+-|....|+++
T Consensus 218 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 289 (297)
T 2ojh_A 218 GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYV 289 (297)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEE
T ss_pred ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEE
Confidence 45668889998888888766 5799999999976555544322222 445677777777665
No 174
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=42.93 E-value=32 Score=38.25 Aligned_cols=51 Identities=12% Similarity=0.044 Sum_probs=36.8
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPS 80 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~ 80 (828)
+.++.|+|..+.++..+.+++|++||+.+|..+++-. .+.+....+++-|.
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRL 408 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSS
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCC
Confidence 5689999999888888889999999999987665422 23332345555554
No 175
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=42.35 E-value=59 Score=33.40 Aligned_cols=65 Identities=17% Similarity=0.199 Sum_probs=48.5
Q ss_pred eeecceeeeecCCcEEEEEeecC-eEEEEeccccceeeeecccCC--------CCceeEEeeCCCCeEEEEcCcee
Q psy13379 26 VRDPDSVIYHPNLNILIVLSRNA-ECIVVDINSGCVLRKCAFAEE--------GQPIKGAYLPSYDKVLLTDTKSV 92 (828)
Q Consensus 26 ~~~~~~i~Yhp~LNviL~~~~~g-~v~V~D~nSgviL~~~~ls~~--------~~~~~~~~~~~~~~~~~~~~~~~ 92 (828)
+.|..+|.|||..|-+++.+... .+.++|.+ |.++....|.+. .|+=.++..| .++++++....+
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE~n~ 245 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSEPNR 245 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEETTTE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcCCce
Confidence 46789999999999999998765 89999977 668999888853 2443445555 456877765543
No 176
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=41.94 E-value=39 Score=37.24 Aligned_cols=36 Identities=8% Similarity=0.242 Sum_probs=32.9
Q ss_pred ecCCcEEEEEeecCeEEEEeccccceeeeecccCCC
Q psy13379 35 HPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEG 70 (828)
Q Consensus 35 hp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~ 70 (828)
-+--++|.+.|+-|-+++||..||+.+-..++|++.
T Consensus 268 s~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 268 SEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp ETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred cccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 445899999999999999999999999999999854
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=41.34 E-value=81 Score=31.85 Aligned_cols=58 Identities=12% Similarity=0.099 Sum_probs=42.0
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCC-ceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQ-PIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~-~~~~~~~~~~~~~~~~~ 88 (828)
+..+.+.|.-+.|.+... .|.|+|..+|.+....-+...+. +-.+++-|..++|++++
T Consensus 227 p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred ceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 567888887777666543 99999999998765433333222 35567888899999998
No 178
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=40.76 E-value=70 Score=31.92 Aligned_cols=61 Identities=10% Similarity=0.107 Sum_probs=39.4
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccceeeeecc--cCC-CCc-eeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCVLRKCAF--AEE-GQP-IKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgviL~~~~l--s~~-~~~-~~~~~~~~~~~~~~~~~ 89 (828)
++.+.++|.-+.+.+.. .++.|.|||.++|.+.....+ .+. ... -.+++-|....|++++.
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 46789999988777777 589999999998866333222 222 122 34556666555656543
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=40.57 E-value=80 Score=30.33 Aligned_cols=61 Identities=21% Similarity=0.350 Sum_probs=39.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
+..|...|.=++++.-+.++.|++||.+ |..+...........+.+..+...++++++|..
T Consensus 123 ~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred ceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 5567777776654444567899999965 666665443333333555556666889998864
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=39.74 E-value=66 Score=31.26 Aligned_cols=57 Identities=11% Similarity=0.149 Sum_probs=41.7
Q ss_pred cceeeeecCCc-EEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLN-ILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LN-viL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
...++|.|.-| ++.+-+.+|.|.+||.++| .+.... ....+.+..+...+++++++.
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES--SCSSEEEEEECTTCCEEEEET
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC--CCCCcceeeECCCCcEEEEec
Confidence 56899999999 5555667899999999998 444433 223466666766788888874
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=39.58 E-value=74 Score=31.92 Aligned_cols=62 Identities=16% Similarity=0.156 Sum_probs=40.2
Q ss_pred ecceeeeecCCcEEEEEeec------------------------CeEEEEeccccceeeeecccCCCCceeEEeeCCCCe
Q psy13379 28 DPDSVIYHPNLNILIVLSRN------------------------AECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDK 83 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~------------------------g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~ 83 (828)
.+..|...|.=|+++.-..+ |.|.+||..+|.+++...-.. -....+..+-..++
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNL-FYLPHGLSIDTDGN 103 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTT-CSSEEEEEECTTSC
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCc-cCCceEEEECCCCC
Confidence 36778888876666544444 479999999999986543211 11234444445667
Q ss_pred EEEEcCc
Q psy13379 84 VLLTDTK 90 (828)
Q Consensus 84 ~~~~~~~ 90 (828)
|+++|..
T Consensus 104 l~v~d~~ 110 (329)
T 3fvz_A 104 YWVTDVA 110 (329)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999874
No 182
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=39.46 E-value=77 Score=30.52 Aligned_cols=60 Identities=13% Similarity=0.232 Sum_probs=37.1
Q ss_pred cceeeeecCCcEEEEE--------eecCeEEEEeccccceeeeecc--cCCCCceeEEeeCCC-CeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVL--------SRNAECIVVDINSGCVLRKCAF--AEEGQPIKGAYLPSY-DKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~--------~~~g~v~V~D~nSgviL~~~~l--s~~~~~~~~~~~~~~-~~~~~~~~ 89 (828)
+..+.+.+.= .|++. +.+|.|.+||..+|.+..-..- .+....+.+..+... +++++++.
T Consensus 20 ~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 20 AEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp CEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred ccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 4577787654 45555 7889999999998876432210 011123444555444 89998875
No 183
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=38.43 E-value=57 Score=35.55 Aligned_cols=56 Identities=11% Similarity=0.246 Sum_probs=32.9
Q ss_pred eeeeec--CCcEEEE-EeecCeEEEEeccccceeeeecccCCCC-c-eeEEeeCCCCeEEEE
Q psy13379 31 SVIYHP--NLNILIV-LSRNAECIVVDINSGCVLRKCAFAEEGQ-P-IKGAYLPSYDKVLLT 87 (828)
Q Consensus 31 ~i~Yhp--~LNviL~-~~~~g~v~V~D~nSgviL~~~~ls~~~~-~-~~~~~~~~~~~~~~~ 87 (828)
.+.+.| .-+.+|+ .+.+++|+|||+.+|..+++..-.+... . ...+|-| .++++++
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs 243 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIV 243 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEE
Confidence 344444 2444555 4778999999999999999864222111 1 2345666 3455544
No 184
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.07 E-value=56 Score=37.32 Aligned_cols=37 Identities=8% Similarity=0.229 Sum_probs=33.3
Q ss_pred eecCCcEEEEEeecCeEEEEeccccceeeeecccCCC
Q psy13379 34 YHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEG 70 (828)
Q Consensus 34 Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~ 70 (828)
--+--++|.++|+-|-+++||..||+.+-..++|++.
T Consensus 266 vs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 266 ISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp EETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred ecccCCEEEEEecCceEEEEecccceeeeeecccCCc
Confidence 3445799999999999999999999999999999865
No 185
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=38.03 E-value=55 Score=38.01 Aligned_cols=53 Identities=8% Similarity=0.050 Sum_probs=40.3
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccce-------eeeecc---cCCCCceeEEeeCCC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCV-------LRKCAF---AEEGQPIKGAYLPSY 81 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgvi-------L~~~~l---s~~~~~~~~~~~~~~ 81 (828)
+.++.++|.=+.|.+.+.+|+|+|||+++|.+ +++-.. ++.+....++|.|..
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 56899999999999999999999999999964 455322 223333777888754
No 186
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=37.32 E-value=71 Score=35.29 Aligned_cols=57 Identities=11% Similarity=0.086 Sum_probs=38.3
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
.+.++.+.|. +.+++. .+|.|+|||+.+|.+.+...... .....++-|...+|+++.
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~SpdG~~la~~~ 139 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNE--ETASLDFSPVGDRVAYVR 139 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTT--CCTTCEECTTSSEEEEEE
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcc--cccCCcCCCCCCEEEEEE
Confidence 3678889999 776665 66999999999997765433221 113345666666666654
No 187
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=37.17 E-value=48 Score=32.78 Aligned_cols=59 Identities=10% Similarity=0.041 Sum_probs=40.1
Q ss_pred cceeeeecCCcEEEEEee---cCeEEEEeccccceeeeeccc-CCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSR---NAECIVVDINSGCVLRKCAFA-EEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~---~g~v~V~D~nSgviL~~~~ls-~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+..+.+.|.=+ |++.+. +|.|+|||+.+|..-+-..+. +...+..+++-|....|++++
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEE
T ss_pred cceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEe
Confidence 56688899766 666655 489999999988743333322 222335667788877788876
No 188
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=37.06 E-value=99 Score=31.96 Aligned_cols=58 Identities=12% Similarity=0.066 Sum_probs=40.2
Q ss_pred cceeeeecCCcEEEEEee---cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSR---NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~---~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
...+.|.|. +.|.+.+. .++|.|+|..+|.++++-.+.+..-+..... ..++|++++.
T Consensus 23 ~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~ 83 (266)
T 2iwa_A 23 TQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVW 83 (266)
T ss_dssp EEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEET
T ss_pred cccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEe
Confidence 357889987 67777665 4799999999999999987754322222222 3567777753
No 189
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=36.77 E-value=74 Score=31.44 Aligned_cols=61 Identities=13% Similarity=0.236 Sum_probs=43.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEee-CCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYL-PSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~-~~~~~~~~~~~~ 90 (828)
+..+..-+.=|+.+.....|.|.+||..+|.+++...+.. .+...+++- |..++|++|...
T Consensus 201 p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~-~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 201 PDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPV-DKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSS-SBEEEEEEESGGGCEEEEEEBC
T ss_pred CCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCC-CCceEEEEeCCCCCEEEEEcCC
Confidence 4566666665655555556789999999999999887653 223556665 788899998764
No 190
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=36.50 E-value=59 Score=39.22 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=34.9
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeeccc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFA 67 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls 67 (828)
+..+++++.-..++.+|.|..+||||.++|.++++.-|.
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 456889999999999999999999999999999987664
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=35.51 E-value=95 Score=32.04 Aligned_cols=71 Identities=8% Similarity=0.001 Sum_probs=50.5
Q ss_pred eeeeecCCcEEEEEee----------cCeEEEEeccccceeeeecccCC-----CCceeEEeeCCCCeEEEEcCceeeee
Q psy13379 31 SVIYHPNLNILIVLSR----------NAECIVVDINSGCVLRKCAFAEE-----GQPIKGAYLPSYDKVLLTDTKSVGVR 95 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~~----------~g~v~V~D~nSgviL~~~~ls~~-----~~~~~~~~~~~~~~~~~~~~~~~~~r 95 (828)
.|.++|.-..+.+... ++.|.|||+.++.++++-.+.++ ..+-.+++-|....|++++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~------ 127 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA------ 127 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE------
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC------
Confidence 8999999998888863 56899999999999988776532 22355677777777777752
Q ss_pred eccCceeeehhh
Q psy13379 96 SDYNGVLLLDTM 107 (828)
Q Consensus 96 ~~~~~~~ll~~~ 107 (828)
..-|.+-++|+.
T Consensus 128 ~~~~~v~v~d~~ 139 (361)
T 2oiz_A 128 SPATSIGIVDVA 139 (361)
T ss_dssp SSSEEEEEEETT
T ss_pred CCCCeEEEEECC
Confidence 112445566653
No 192
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=35.44 E-value=42 Score=38.60 Aligned_cols=50 Identities=16% Similarity=0.082 Sum_probs=37.5
Q ss_pred CCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 37 NLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 37 ~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
.-|++.+.|.+|.+++||+.+|.+|-+..+....+.--..| ...+|.+++
T Consensus 485 agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty-~~~G~qyv~ 534 (689)
T 1yiq_A 485 AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTY-SVDGEQYVT 534 (689)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEE-EECCEEEEE
Confidence 44677777889999999999999999999887654434566 345665554
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=34.91 E-value=1.5e+02 Score=28.04 Aligned_cols=60 Identities=8% Similarity=-0.012 Sum_probs=38.6
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
.+..|...+.=|+.+....++.|.++|.+ |.+ ....+...+..+.+..+-..+++++++.
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEcc
Confidence 35567777666654444447899999999 776 3444443334455555555788998875
No 194
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=34.63 E-value=53 Score=35.80 Aligned_cols=37 Identities=8% Similarity=-0.035 Sum_probs=24.7
Q ss_pred EeecCeEEEEeccccceeeeecccCCCCcee-EEeeCCC
Q psy13379 44 LSRNAECIVVDINSGCVLRKCAFAEEGQPIK-GAYLPSY 81 (828)
Q Consensus 44 ~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~-~~~~~~~ 81 (828)
.+.+|+|+|||+.+|..+++.. .+.++.+. ++|-|..
T Consensus 301 gS~DgTIkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 301 ILTSGTIAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EETTSCEEEEETTTCSEEEEEC-CC--CCCCEEEECSSS
T ss_pred EcCCCcEEEEECCCCcEEEEec-CCCCCeEEEEEECCCC
Confidence 3469999999999999999854 12222343 4666643
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=34.42 E-value=1.5e+02 Score=27.98 Aligned_cols=58 Identities=9% Similarity=-0.011 Sum_probs=38.5
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..|...|.=+ |.+.+ .++.|.++|. +|.+.. ..+......+.+.++-..++|++++.
T Consensus 185 ~~~i~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~ 243 (299)
T 2z2n_A 185 PVGITKGNDDA-LWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEW 243 (299)
T ss_dssp EEEEEECTTSS-EEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEET
T ss_pred ceeEEECCCCC-EEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEecc
Confidence 55777777755 44444 4789999999 787543 33443334466777766688999873
No 196
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=34.33 E-value=64 Score=33.41 Aligned_cols=25 Identities=28% Similarity=0.429 Sum_probs=12.5
Q ss_pred cEEEEEeecCeEEEEeccccceeee
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRK 63 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~ 63 (828)
+.|+..+.+|.|+|||+++|..+++
T Consensus 184 ~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 184 RVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp SEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEE
Confidence 3444444455555555555554444
No 197
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=33.78 E-value=71 Score=31.75 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=48.5
Q ss_pred EEEEeecCeEEEEeccccceeeeecccCCCCc--eeEEeeCCCCeEEEEcCceeeeeeccCceeeehhhhh
Q psy13379 41 LIVLSRNAECIVVDINSGCVLRKCAFAEEGQP--IKGAYLPSYDKVLLTDTKSVGVRSDYNGVLLLDTMLQ 109 (828)
Q Consensus 41 iL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ll~~~l~ 109 (828)
.++.+++|.+.|+| ..|..+..+.+.....- -.+......+.|.=||-...=+-+++.|.+-+.-+.+
T Consensus 34 ~vv~~r~g~i~I~d-~~g~e~~~~~ipyGa~L~V~dG~~V~~G~~laewDp~t~pIisE~~G~V~f~dii~ 103 (190)
T 2auk_A 34 LVITSRNTELKLID-EFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITEVSGFVRFTDMID 103 (190)
T ss_dssp EEECCSSCEEEEEC-TTSCEEEEEECCTTCEESSCTTCEECTTCEEEECCSSEEEEECSSCEEEEEESCCB
T ss_pred EEEEccccEEEEEc-CCCcEEEEEEcCCCCEEEecCCCEEcCCCEEEEEcCcCCcEEeccccEEEEEeccC
Confidence 47788888888988 55777777665542100 1235566677888888888889999999988877664
No 198
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=33.19 E-value=39 Score=34.27 Aligned_cols=48 Identities=10% Similarity=0.138 Sum_probs=33.5
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+.|.+.+.+|.+.+||+.+|.++.+..+.+. ++........++|++..
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~--~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFVAQQKVDSS--GFQTEPVAADGKLLIQA 366 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCTT--CBCSCCEEETTEEEEEB
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecCCC--cceeCCEEECCEEEEEe
Confidence 7888999999999999999999998877432 22222222355665543
No 199
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=32.72 E-value=86 Score=32.23 Aligned_cols=44 Identities=16% Similarity=0.129 Sum_probs=34.6
Q ss_pred ecCeEEEEeccccceeeeecccC-----------CCCc-eeEEeeCCCCeEEEEcC
Q psy13379 46 RNAECIVVDINSGCVLRKCAFAE-----------EGQP-IKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 46 ~~g~v~V~D~nSgviL~~~~ls~-----------~~~~-~~~~~~~~~~~~~~~~~ 89 (828)
....|.|+|..||.+++.-.+++ .+.. -.++|.|..+++++|.-
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 35699999999999999977662 1222 56899999999999853
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=30.99 E-value=2e+02 Score=28.60 Aligned_cols=58 Identities=19% Similarity=0.129 Sum_probs=39.2
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
++..+...|+=|+++ +.++.|++||. +|.++.++.... +..+...-.-..+++++++.
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~-~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPA-GCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCT-TCEEEEEEECTTSCEEEEEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCC-CccccccEECCCCCEEEEec
Confidence 355677778777554 77889999999 899999988742 22343333334567777754
No 201
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=30.44 E-value=85 Score=35.43 Aligned_cols=58 Identities=10% Similarity=0.051 Sum_probs=42.5
Q ss_pred eeeeecCCcEEEEEee--------------------cCeEEEEeccccceeeeecccCCCCc-eeEEe--eCCCCeEEEE
Q psy13379 31 SVIYHPNLNILIVLSR--------------------NAECIVVDINSGCVLRKCAFAEEGQP-IKGAY--LPSYDKVLLT 87 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~~--------------------~g~v~V~D~nSgviL~~~~ls~~~~~-~~~~~--~~~~~~~~~~ 87 (828)
.+-|+|.-| +|+.+. ..+|.|||.+++.++++-.+..+++. ..+++ -|....++++
T Consensus 192 d~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~ 270 (462)
T 2ece_A 192 DFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFIN 270 (462)
T ss_dssp CEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEE
T ss_pred eEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEE
Confidence 477899999 444443 57999999999999999888755444 44444 6777777776
Q ss_pred cC
Q psy13379 88 DT 89 (828)
Q Consensus 88 ~~ 89 (828)
..
T Consensus 271 ~e 272 (462)
T 2ece_A 271 MV 272 (462)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 202
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=30.17 E-value=2.1e+02 Score=28.47 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=41.1
Q ss_pred ceeeeecCCcEEEEEeec--CeEEEEecc--ccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 30 DSVIYHPNLNILIVLSRN--AECIVVDIN--SGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 30 ~~i~Yhp~LNviL~~~~~--g~v~V~D~n--SgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
..|.++|.=+.|.+.... +.|.|||++ +|.+.....+.....+..+++-|....|++++.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC
Confidence 578899998877776654 799999986 676444444443222355677787777888763
No 203
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=29.93 E-value=2e+02 Score=29.58 Aligned_cols=91 Identities=10% Similarity=0.101 Sum_probs=54.2
Q ss_pred cceeeeecCCcEEEEEe-ecCeEEEEeccccceeeeecccC-----------C-CCceeEEeeCCCCeEEEEcCce---e
Q psy13379 29 PDSVIYHPNLNILIVLS-RNAECIVVDINSGCVLRKCAFAE-----------E-GQPIKGAYLPSYDKVLLTDTKS---V 92 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~-~~g~v~V~D~nSgviL~~~~ls~-----------~-~~~~~~~~~~~~~~~~~~~~~~---~ 92 (828)
+-++.|.. +.|.+-. ..+.|.|+|..+|.++++-.+++ . .....++|.|..+++++|.... -
T Consensus 154 ~nele~~d--g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~ 231 (266)
T 2iwa_A 154 LNELEYIN--GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLF 231 (266)
T ss_dssp EEEEEEET--TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred ceeEEEEC--CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEE
Confidence 33555663 3333333 25799999999999999987762 1 2336788999999999998542 2
Q ss_pred eeeec-cCceeeehhhhhhcccCCCCceEE
Q psy13379 93 GVRSD-YNGVLLLDTMLQTCLKSKNNPVKL 121 (828)
Q Consensus 93 ~~r~~-~~~~~ll~~~l~~~~~~~~~~~~~ 121 (828)
=+|-. .+.-.-|+.+=|.|+.-.+++.+|
T Consensus 232 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (266)
T 2iwa_A 232 EIKLHLVRHRIPDGYIERHCLNLRDNTLSL 261 (266)
T ss_dssp EEEEEECCSCCCTTHHHHHHSCC-------
T ss_pred EEEEecccCCcchhHHHhhCccccCCeeee
Confidence 22222 223356677777777655555554
No 204
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=29.89 E-value=78 Score=33.80 Aligned_cols=36 Identities=17% Similarity=0.009 Sum_probs=30.5
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeee
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKC 64 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~ 64 (828)
.+..+.++|.=+.|++.+.+|.|+|||+. |...++.
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 47889999999999999999999999998 6555543
No 205
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=29.65 E-value=47 Score=37.30 Aligned_cols=48 Identities=13% Similarity=0.042 Sum_probs=33.9
Q ss_pred CcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 38 LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 38 LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
-+++.+.+.+|.|++||+.+|.+|-+..+.......-..|. ..+++++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~-~~G~~yv 522 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYS-FKGKQYI 522 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEE-ECCEEEE
Confidence 36777888899999999999999999988754322223342 3455544
No 206
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=29.45 E-value=86 Score=32.38 Aligned_cols=27 Identities=26% Similarity=0.378 Sum_probs=14.7
Q ss_pred cEEEEEeecCeEEEEeccccceeeeec
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCA 65 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ 65 (828)
|.++..+.+|.|+|||..+|..+++..
T Consensus 330 ~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 330 NILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp TEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 345555555566666665555555443
No 207
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=28.23 E-value=1.7e+02 Score=28.37 Aligned_cols=57 Identities=11% Similarity=0.062 Sum_probs=37.5
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEe-eCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAY-LPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~-~~~~~~~~~~~~~ 90 (828)
+..|...+.=| |++.+ ++.|.+||.+ |..++....... .-.+++ -|..+.|+++...
T Consensus 220 p~~i~~d~~G~-l~v~~-~~~v~~~~~~-g~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 220 TDGLRVDAGGL-IWASA-GDGVHVLTPD-GDELGRVLTPQT--TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp CCSEEEBTTSC-EEEEE-TTEEEEECTT-SCEEEEEECSSC--CCEEEEESTTSCEEEEEETT
T ss_pred CCeEEECCCCC-EEEEc-CCeEEEECCC-CCEEEEEECCCC--ceeEEEECCCCCEEEEEcCC
Confidence 34566666655 55555 8899999997 877777665443 334555 3566678777654
No 208
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=28.03 E-value=1.3e+02 Score=31.18 Aligned_cols=32 Identities=13% Similarity=-0.027 Sum_probs=26.4
Q ss_pred eecCCcEEEEEeecCeEEEEeccccceeeeec
Q psy13379 34 YHPNLNILIVLSRNAECIVVDINSGCVLRKCA 65 (828)
Q Consensus 34 Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ 65 (828)
..+.-+.|+..+.+|.|+|||.++|..++...
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 34466788888999999999999998887754
No 209
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=27.78 E-value=1.7e+02 Score=28.59 Aligned_cols=61 Identities=13% Similarity=0.374 Sum_probs=39.2
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCC--C---CceeEEeeCCCCeEEEEcCc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEE--G---QPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~--~---~~~~~~~~~~~~~~~~~~~~ 90 (828)
+..|...+.=|+.+....+|.|.+||. .|..++...+... + ....+++-|..++|+++...
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 455777777564444445789999999 5777777655432 1 23456666776788877654
No 210
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=27.63 E-value=79 Score=32.97 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=34.1
Q ss_pred ecCeEEEEeccccceeeeecccC----------CCCc-eeEEeeCCCCeEEEEcC
Q psy13379 46 RNAECIVVDINSGCVLRKCAFAE----------EGQP-IKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 46 ~~g~v~V~D~nSgviL~~~~ls~----------~~~~-~~~~~~~~~~~~~~~~~ 89 (828)
..+.|.|+|..||.+++.-.+++ .+.. -.++|.|..+++++|.-
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 35699999999999999977652 1122 56899999999999853
No 211
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=27.59 E-value=68 Score=36.76 Aligned_cols=47 Identities=9% Similarity=0.129 Sum_probs=35.0
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEE
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLL 86 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~ 86 (828)
+++.+.+.+|.+++||+.+|.+|.+..+....+..-..|- ..+|.++
T Consensus 489 ~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~-~~G~~~v 535 (677)
T 1kb0_A 489 NVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYM-VDGRQYV 535 (677)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEE
T ss_pred CEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEE-eCCEEEE
Confidence 5667778899999999999999999998875544445663 3445554
No 212
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=27.55 E-value=53 Score=36.22 Aligned_cols=64 Identities=6% Similarity=0.031 Sum_probs=39.5
Q ss_pred CceeecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCC--CceeEEeeCCCCeEEEEc
Q psy13379 24 PIVRDPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEG--QPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 24 ~~~~~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~--~~~~~~~~~~~~~~~~~~ 88 (828)
.......++.+.|.=. +++.+.+|.|++||+.+|...+...-.... .....++-|...+|+++.
T Consensus 14 ~~~~~~~~~~~spdg~-~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~ 79 (723)
T 1xfd_A 14 DFKIHDPEAKWISDTE-FIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSY 79 (723)
T ss_dssp TTCCCCCCCCBSSSSC-BCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEE
T ss_pred CCcccccccEEcCCCc-EEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEe
Confidence 3334467777888765 455578999999999999765443221111 123455666666666653
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=27.08 E-value=99 Score=33.96 Aligned_cols=74 Identities=15% Similarity=0.037 Sum_probs=55.1
Q ss_pred eeeeecCCcEEEEEe----------ecCeEEEEeccccceeeeeccc-CC-----CCceeEEeeCCCCeEEEEcCceeee
Q psy13379 31 SVIYHPNLNILIVLS----------RNAECIVVDINSGCVLRKCAFA-EE-----GQPIKGAYLPSYDKVLLTDTKSVGV 94 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~----------~~g~v~V~D~nSgviL~~~~ls-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (828)
.|.+.|.-+.+.+.. .++.|.|+|..++.++++-.+. +. ..+-...+-|...++++++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~----- 196 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF----- 196 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC-----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec-----
Confidence 899999999888886 4679999999999999998875 11 12344566777788888763
Q ss_pred eeccCceeeehhhhhh
Q psy13379 95 RSDYNGVLLLDTMLQT 110 (828)
Q Consensus 95 r~~~~~~~ll~~~l~~ 110 (828)
.+-|.|.++|+.-.+
T Consensus 197 -~~~~~VsVID~~t~k 211 (426)
T 3c75_H 197 -SPAPAVGVVDLEGKT 211 (426)
T ss_dssp -SSSCEEEEEETTTTE
T ss_pred -CCCCeEEEEECCCCe
Confidence 234668888876544
No 214
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=27.01 E-value=1.9e+02 Score=28.48 Aligned_cols=61 Identities=16% Similarity=0.188 Sum_probs=40.2
Q ss_pred cceeeeecCCcEEEEEee-cCeEEEEecc-ccceeeeecccCCCC-ceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSR-NAECIVVDIN-SGCVLRKCAFAEEGQ-PIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~-~g~v~V~D~n-SgviL~~~~ls~~~~-~~~~~~~~~~~~~~~~~~ 89 (828)
+..+.+.|.=+.|.+... ++.|.|||++ .|.+.....+...+. +-.+++-|....|++++.
T Consensus 242 ~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred ceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 556888998777766554 7899999997 454333333333232 345677777777888764
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=26.81 E-value=85 Score=32.65 Aligned_cols=44 Identities=23% Similarity=0.246 Sum_probs=33.2
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEE
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVL 85 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~ 85 (828)
+.+++.+.+|.|+.||+++|.++-+..++. ++-..|.-+.|.++
T Consensus 174 ~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~---pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 174 MSHFVSNGDGLVVTVDSESGDVLWIQNYAS---PVVAFYVWQREGLR 217 (369)
T ss_dssp CCEEEEETSCEEEEECTTTCCEEEEEECSS---CEEEEEECTTSSCE
T ss_pred ceEEEECCCCEEEEEECCCCcEEEEecCCC---ceEEEEEecCCceE
Confidence 678888999999999999999998888654 54445555544433
No 216
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=26.63 E-value=1.8e+02 Score=29.77 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=38.8
Q ss_pred cceeeeecCCcEEEEEeec---CeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSRN---AECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~---g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
.-.+.|++ +.|.+-|.. .+|+++|..+|.++++-.+.+..-+..+.. ..++|+..+
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~lt 81 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLT 81 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEE
Confidence 34678888 677776665 389999999999999988876432222222 357777664
No 217
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=26.47 E-value=1.6e+02 Score=30.81 Aligned_cols=58 Identities=14% Similarity=0.138 Sum_probs=41.3
Q ss_pred cceeeeecCCcEEEEEeecC---eEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEc
Q psy13379 29 PDSVIYHPNLNILIVLSRNA---ECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g---~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~ 88 (828)
+.++.++|.=+.|+..+.++ .|+|||+.+|...+-.. ..+.....++-|...+|+++-
T Consensus 181 v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~--~~~~~~~~~~spdg~~la~~~ 241 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS--FPRHNGAPAFSPDGSKLAFAL 241 (415)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC--CSSCEEEEEECTTSSEEEEEE
T ss_pred ceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec--CCCcccCEEEcCCCCEEEEEE
Confidence 55678888888887777664 99999999997754322 223335677888777787664
No 218
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=24.59 E-value=64 Score=36.86 Aligned_cols=57 Identities=7% Similarity=-0.045 Sum_probs=39.9
Q ss_pred CcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCceeeee
Q psy13379 38 LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTKSVGVR 95 (828)
Q Consensus 38 LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~r 95 (828)
=|++.+.+.+|.|++||+.+|.+|.+..+......--..| ...+++.++-....|.+
T Consensus 469 gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~-~~~G~~yva~~~G~g~~ 525 (668)
T 1kv9_A 469 GNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF-ELAGRQYVAIMAGWGGV 525 (668)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEEEEECCCSH
T ss_pred CCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE-EECCEEEEEEEecCCCc
Confidence 4677777889999999999999999999875432223445 45677666655544443
No 219
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=24.10 E-value=2e+02 Score=27.06 Aligned_cols=59 Identities=10% Similarity=0.071 Sum_probs=36.4
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcC
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDT 89 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~ 89 (828)
+..|...|.-++.+.-+.++.|.++|. +|.+.+- .+......+.+..+-..+++++++.
T Consensus 143 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 143 PSFITLGSDNALWFTENQNNAIGRITE-SGDITEF-KIPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe-eCCCCCCcceeEEECCCCCEEEEcc
Confidence 456666666555444445789999999 7876642 2322233355555555678888874
No 220
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=23.97 E-value=79 Score=35.70 Aligned_cols=48 Identities=15% Similarity=0.021 Sum_probs=34.1
Q ss_pred cEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 39 NILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 39 NviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+++.+-+.+|.++.||+.+|.+|-+.++....+.--..|- ..+|++++
T Consensus 498 glvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~-~~G~qYv~ 545 (582)
T 1flg_A 498 NLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWE-QDGEQYLG 545 (582)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEE-ETTEEEEE
T ss_pred CEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEE-ECCEEEEE
Confidence 5677788899999999999999999998654332224552 44555443
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=23.74 E-value=1.5e+02 Score=31.04 Aligned_cols=43 Identities=14% Similarity=0.194 Sum_probs=34.3
Q ss_pred ecCeEEEEeccccceeeeecccC-----------CCCc-eeEEeeCCCCeEEEEc
Q psy13379 46 RNAECIVVDINSGCVLRKCAFAE-----------EGQP-IKGAYLPSYDKVLLTD 88 (828)
Q Consensus 46 ~~g~v~V~D~nSgviL~~~~ls~-----------~~~~-~~~~~~~~~~~~~~~~ 88 (828)
..+.|.|+|..||.+++.-.+++ .+.. -.++|.|..+++++|.
T Consensus 199 ~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 199 HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 36699999999999999977762 1222 5689999999999985
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=23.44 E-value=2.2e+02 Score=30.17 Aligned_cols=63 Identities=11% Similarity=0.038 Sum_probs=43.9
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeee--eccc-CCCCc-e-eEEeeCCCCeEEEEcCc
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRK--CAFA-EEGQP-I-KGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~--~~ls-~~~~~-~-~~~~~~~~~~~~~~~~~ 90 (828)
.+..|..+|.-+-|++...+|.|++||.+++.+..- .... ..+.+ . .+++-|..+.|+++|..
T Consensus 220 ~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 220 KIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp CCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred CcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 357788899777788877788999999998753221 1111 11222 4 77888888999999864
No 223
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=23.38 E-value=81 Score=36.03 Aligned_cols=49 Identities=10% Similarity=0.057 Sum_probs=35.4
Q ss_pred CcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 38 LNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 38 LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
-|++.+.|.+|.++.||+.+|.+|-+..+....+.--..| ...+|++++
T Consensus 484 gg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y-~~~G~qyv~ 532 (599)
T 1w6s_A 484 GDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTY-THKGTQYVA 532 (599)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEE-EeCCEEEEE
Confidence 3677778889999999999999999999876443322445 345565544
No 224
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=22.88 E-value=2.2e+02 Score=26.80 Aligned_cols=61 Identities=7% Similarity=0.040 Sum_probs=37.9
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
.+..|...|.=++.+.-..++.|.++|. +|.+.. ..+......+.+..+-..++|++++..
T Consensus 147 ~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~ 207 (300)
T 2qc5_A 147 YPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIM 207 (300)
T ss_dssp CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred CceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccC
Confidence 3566777777663333334789999999 676654 333333334555556557788888753
No 225
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=22.45 E-value=1.9e+02 Score=32.07 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=38.1
Q ss_pred cceeeeecCCcEEEEEee---------cCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEE
Q psy13379 29 PDSVIYHPNLNILIVLSR---------NAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLT 87 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~---------~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~ 87 (828)
+.++.+.|.-+.|++.+. +|.|+|||+.+|.++....+... .-..++-|...+|+++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~--~~~~~~SPDG~~la~~ 127 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP--IQYLCWSPVGSKLAYV 127 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS--BCCEEECSSTTCEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc--cccceECCCCCEEEEE
Confidence 567888898888887776 68999999999987433333211 1234555555555554
No 226
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=21.59 E-value=1.2e+02 Score=31.93 Aligned_cols=43 Identities=12% Similarity=-0.059 Sum_probs=32.8
Q ss_pred EeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 44 LSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 44 ~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
.-.++.+.|+|.+++.++++-.+.++|-++. +..++|+++|+.
T Consensus 112 tw~~~~v~V~D~~Tl~~~~ti~~~~eGwGLt----~Dg~~L~vSdGs 154 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQRERTTRYSGEGWGLC----YWNGKLVRSDGG 154 (268)
T ss_dssp ESSSCEEEEEETTTTEEEEEEECSSCCCCEE----EETTEEEEECSS
T ss_pred EccCCEEEEEECCcCcEEEEEeCCCceeEEe----cCCCEEEEECCC
Confidence 3468899999999999999998887764432 345677777753
No 227
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=21.57 E-value=2e+02 Score=31.91 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=29.5
Q ss_pred cceeeeecCCcEEEEEee-cC-----eEEEEeccccceeeeecc
Q psy13379 29 PDSVIYHPNLNILIVLSR-NA-----ECIVVDINSGCVLRKCAF 66 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~-~g-----~v~V~D~nSgviL~~~~l 66 (828)
+.++.+.|.=..|...+. +| .|++||+++|...+....
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~ 82 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDS 82 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECG
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccch
Confidence 567888888777777776 77 999999999977655443
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=21.15 E-value=1.8e+02 Score=31.58 Aligned_cols=74 Identities=14% Similarity=0.044 Sum_probs=53.1
Q ss_pred eeeeecCCcEEEEEe----------ecCeEEEEeccccceeeeecccC-C-----CCceeEEeeCCCCeEEEEcCceeee
Q psy13379 31 SVIYHPNLNILIVLS----------RNAECIVVDINSGCVLRKCAFAE-E-----GQPIKGAYLPSYDKVLLTDTKSVGV 94 (828)
Q Consensus 31 ~i~Yhp~LNviL~~~----------~~g~v~V~D~nSgviL~~~~ls~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (828)
.|.+.|.-..+.+.. ..+.|.|||..++.++++-.+.+ + ..+-..++-|...++++++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~----- 156 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQF----- 156 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEEC-----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEc-----
Confidence 588899999888876 35789999999999999877654 1 12345667777777887753
Q ss_pred eeccCceeeehhhhhh
Q psy13379 95 RSDYNGVLLLDTMLQT 110 (828)
Q Consensus 95 r~~~~~~~ll~~~l~~ 110 (828)
.+-|.|-++|+.=.+
T Consensus 157 -~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 157 -SPAPAVGVVDLEGKA 171 (386)
T ss_dssp -SSSCEEEEEETTTTE
T ss_pred -CCCCeEEEEECCCCc
Confidence 224667788875443
No 229
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=20.90 E-value=2.3e+02 Score=30.56 Aligned_cols=29 Identities=17% Similarity=0.336 Sum_probs=26.7
Q ss_pred cceeeeecCCcEEEEEeecCeEEEEeccc
Q psy13379 29 PDSVIYHPNLNILIVLSRNAECIVVDINS 57 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~g~v~V~D~nS 57 (828)
...|+|||.=|+|++....|.+..||++.
T Consensus 187 ~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 187 YSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred cceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 56999999999999998899999999984
No 230
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=20.54 E-value=1.9e+02 Score=31.82 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=25.9
Q ss_pred cceeeeecCCcEEEEEeec---------CeEEEEeccccce
Q psy13379 29 PDSVIYHPNLNILIVLSRN---------AECIVVDINSGCV 60 (828)
Q Consensus 29 ~~~i~Yhp~LNviL~~~~~---------g~v~V~D~nSgvi 60 (828)
+.++.+.|.-+.|+..+.+ +.++|||+.+|..
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 6788899998877776653 7899999999975
No 231
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=20.47 E-value=3e+02 Score=27.77 Aligned_cols=74 Identities=14% Similarity=0.046 Sum_probs=47.1
Q ss_pred ecceeeeecCCcEEEEEee------cCeEEEEeccccceeeeecccCC----CCc-eeEEeeCCCCeEEEEcCceeeeee
Q psy13379 28 DPDSVIYHPNLNILIVLSR------NAECIVVDINSGCVLRKCAFAEE----GQP-IKGAYLPSYDKVLLTDTKSVGVRS 96 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~------~g~v~V~D~nSgviL~~~~ls~~----~~~-~~~~~~~~~~~~~~~~~~~~~~r~ 96 (828)
.+..|...|. +.|++.-. .+.|.+||.++|.++++..+... +.. -.++.-|..+.++++|... .
T Consensus 68 ~p~gv~~d~~-g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~----~ 142 (343)
T 2qe8_A 68 TVLGIKSDGN-GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP----D 142 (343)
T ss_dssp CEEEEEECSS-SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS----G
T ss_pred EeeEEEEcCC-CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc----C
Confidence 3556666666 55555432 36999999999998888877532 111 3455666778899998631 1
Q ss_pred ccCceeeehh
Q psy13379 97 DYNGVLLLDT 106 (828)
Q Consensus 97 ~~~~~~ll~~ 106 (828)
..+++.++|.
T Consensus 143 ~~~~i~v~d~ 152 (343)
T 2qe8_A 143 DKAALIRVDL 152 (343)
T ss_dssp GGCEEEEEET
T ss_pred CCCeEEEEEC
Confidence 2456666663
No 232
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=20.23 E-value=2.8e+02 Score=27.50 Aligned_cols=62 Identities=13% Similarity=0.194 Sum_probs=39.2
Q ss_pred ecceeeeecCCcEEEEEeecCeEEEEeccccceeeeecccC-------------------CCCceeEEeeCCCCeEEEEc
Q psy13379 28 DPDSVIYHPNLNILIVLSRNAECIVVDINSGCVLRKCAFAE-------------------EGQPIKGAYLPSYDKVLLTD 88 (828)
Q Consensus 28 ~~~~i~Yhp~LNviL~~~~~g~v~V~D~nSgviL~~~~ls~-------------------~~~~~~~~~~~~~~~~~~~~ 88 (828)
....|++.|.=|++.+-+.+|.|.+||.+++.+.. ..... .+.+..+++.|..++|+++|
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 35667888876667777788999999998775431 11100 01223344444588999998
Q ss_pred Cc
Q psy13379 89 TK 90 (828)
Q Consensus 89 ~~ 90 (828)
..
T Consensus 99 ~~ 100 (322)
T 2fp8_A 99 CY 100 (322)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 233
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=20.03 E-value=2.7e+02 Score=28.10 Aligned_cols=48 Identities=4% Similarity=0.038 Sum_probs=35.4
Q ss_pred EEEEeecCeEEEEeccccceeeeecccCCCCceeEEeeCCCCeEEEEcCc
Q psy13379 41 LIVLSRNAECIVVDINSGCVLRKCAFAEEGQPIKGAYLPSYDKVLLTDTK 90 (828)
Q Consensus 41 iL~~~~~g~v~V~D~nSgviL~~~~ls~~~~~~~~~~~~~~~~~~~~~~~ 90 (828)
.|+++....|+++|.+++..... +..-..+....|-+..++|+++|..
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~--~~~~~~p~g~~~d~~~~~ly~~D~~ 50 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSL--IPNLRNVVALDTEVASNRIYWSDLS 50 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEE--ECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCeEEEEECCCcceEeh--hcCCCceEEEEEEeCCCEEEEEECC
Confidence 47778888899999998754432 2222335778899999999999965
Done!