RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13390
(245 letters)
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 134 bits (338), Expect = 3e-40
Identities = 66/134 (49%), Positives = 99/134 (73%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G++F R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++
Sbjct: 40 GIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN 99
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
W+ + +H+++++ M++GNK D++ +R+V KE GE A ++G+ FMETSAK NVE A
Sbjct: 100 WIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENA 159
Query: 219 FIDTAKEIYEKIQE 232
F A++I K+ +
Sbjct: 160 FFTLARDIKAKMDK 173
Score = 57.1 bits (137), Expect = 8e-11
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
+ M++GNK D++ +R+V KE GE A ++G+ FMETSAK NVE AF A++I K+
Sbjct: 112 VEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 171
Query: 61 QE 62
+
Sbjct: 172 DK 173
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 127 bits (321), Expect = 1e-37
Identities = 64/132 (48%), Positives = 90/132 (68%), Gaps = 1/132 (0%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G++F + + I+GK++KLQIWDTAGQE FR+IT +YYRGA G +LVYDIT TF ++
Sbjct: 36 GIDFKIKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQ 95
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
W + +H+N ++L+GNKSD++ R ++GE A+E G+ F+E+SAK NV E
Sbjct: 96 WFKTVNEHANDEAQLLLVGNKSDMETRVVT-ADQGEALAKELGIPFIESSAKNDDNVNEI 154
Query: 219 FIDTAKEIYEKI 230
F AK I EKI
Sbjct: 155 FFTLAKLIQEKI 166
Score = 54.4 bits (130), Expect = 6e-10
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
++L+GNKSD++ R ++GE A+E G+ F+E+SAK NV E F AK I EKI
Sbjct: 108 AQLLLVGNKSDMETRVVTA-DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 166
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 124 bits (311), Expect = 3e-36
Identities = 60/129 (46%), Positives = 92/129 (71%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G++F +++ +DG ++KLQ+WDTAGQE FRS+T +YYR A LL+YD+T + +F+++
Sbjct: 41 GIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQA 100
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
WL + +++ ++ +ML+GNK D R VK+E+GE A+E+GL FMETSAK NV+ A
Sbjct: 101 WLTEIHEYAQHDVALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLA 160
Query: 219 FIDTAKEIY 227
F AKE+
Sbjct: 161 FTAIAKELK 169
Score = 59.5 bits (143), Expect = 9e-12
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
+ +ML+GNK D R VK+E+GE A+E+GL FMETSAK NV+ AF AKE+
Sbjct: 113 VALMLLGNKVDSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELK 169
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 121 bits (304), Expect = 4e-35
Identities = 113/130 (86%), Positives = 125/130 (96%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
M+ IDGKQIKLQIWDTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHLT+WLEDARQ
Sbjct: 44 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 103
Query: 166 HSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKE 225
HS+SNMVIMLIGNKSDL++RR+VK+EEGE FAREHGL+FMETSAK A NVEEAFI+TAKE
Sbjct: 104 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 163
Query: 226 IYEKIQEGVF 235
IY KIQ+G+F
Sbjct: 164 IYRKIQQGLF 173
Score = 75.3 bits (184), Expect = 2e-17
Identities = 53/65 (81%), Positives = 61/65 (93%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
MVIMLIGNKSDL++RR+VK+EEGE FAREHGL+FMETSAK A NVEEAFI+TAKEIY KI
Sbjct: 109 MVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKI 168
Query: 61 QEGVF 65
Q+G+F
Sbjct: 169 QQGLF 173
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 120 bits (301), Expect = 8e-35
Identities = 85/129 (65%), Positives = 109/129 (84%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
GVEFG R+I + G++IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL++
Sbjct: 38 GVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS 97
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
WL DAR +N N VI+LIGNK+DL+A+R+V EE + FA E+GL+F+E SAK NVE+A
Sbjct: 98 WLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDA 157
Query: 219 FIDTAKEIY 227
F++ AK+IY
Sbjct: 158 FLEAAKKIY 166
Score = 64.5 bits (156), Expect = 1e-13
Identities = 33/57 (57%), Positives = 46/57 (80%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
VI+LIGNK+DL+A+R+V EE + FA E+GL+F+E SAK NVE+AF++ AK+IY
Sbjct: 110 TVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIY 166
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 116 bits (291), Expect = 4e-33
Identities = 74/135 (54%), Positives = 95/135 (70%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
GVEF R I +DGK IK QIWDTAGQE +R IT +YYRGA GALLVYDI + T+ ++
Sbjct: 38 GVEFATRSIQVDGKTIKAQIWDTAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVER 97
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
WL++ R H++SN+VIML+GNKSDL R V +E FA ++ L F+ETSA +TNVEEA
Sbjct: 98 WLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEA 157
Query: 219 FIDTAKEIYEKIQEG 233
F + EIY + +
Sbjct: 158 FKNILTEIYRIVSQK 172
Score = 60.3 bits (145), Expect = 6e-12
Identities = 31/63 (49%), Positives = 41/63 (65%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
+VIML+GNKSDL R V +E FA ++ L F+ETSA +TNVEEAF + EIY +
Sbjct: 110 IVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIV 169
Query: 61 QEG 63
+
Sbjct: 170 SQK 172
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 116 bits (290), Expect = 4e-33
Identities = 58/131 (44%), Positives = 79/131 (60%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G++F + I + K+IKLQIWDTAGQE +R+IT +YYRGA G +L+YDIT E+FN +
Sbjct: 39 GIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD 98
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
W + +S N ++L+GNK D++ R V E G A G F E SAK NV++
Sbjct: 99 WSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQT 158
Query: 219 FIDTAKEIYEK 229
F I EK
Sbjct: 159 FERLVDVICEK 169
Score = 50.3 bits (119), Expect = 2e-08
Identities = 22/59 (37%), Positives = 29/59 (49%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
++L+GNK D++ R V E G A G F E SAK NV++ F I EK
Sbjct: 111 AQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEK 169
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 115 bits (289), Expect = 7e-33
Identities = 83/132 (62%), Positives = 102/132 (77%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLE 161
FG+++I + GK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LT WL
Sbjct: 42 FGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLT 101
Query: 162 DARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFID 221
DAR ++ N+VI+L GNK DLDA REV E FA+E+ L+F+ETSA NVEEAF+
Sbjct: 102 DARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQ 161
Query: 222 TAKEIYEKIQEG 233
A++I KI+ G
Sbjct: 162 CARKILNKIESG 173
Score = 57.6 bits (138), Expect = 4e-11
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
+VI+L GNK DLDA REV E FA+E+ L+F+ETSA NVEEAF+ A++I KI
Sbjct: 111 IVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKI 170
Query: 61 QEG 63
+ G
Sbjct: 171 ESG 173
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 114 bits (285), Expect = 3e-32
Identities = 61/139 (43%), Positives = 92/139 (66%)
Query: 91 SSGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRR 150
G + GV+F + + I+G+++KLQIWDTAGQE FRSIT+SYYR A +L YDIT
Sbjct: 31 PPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCE 90
Query: 151 ETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAK 210
E+F L WL + Q++++ ++ +L+GNK DL RREV ++ E F+ + ++ETSAK
Sbjct: 91 ESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 150
Query: 211 LATNVEEAFIDTAKEIYEK 229
+ NVE+ F+D A + +
Sbjct: 151 ESDNVEKLFLDLACRLISE 169
Score = 47.5 bits (112), Expect = 2e-07
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
++ +L+GNK DL RREV ++ E F+ + ++ETSAK + NVE+ F+D A + +
Sbjct: 111 VITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRLISE 169
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 114 bits (286), Expect = 3e-32
Identities = 62/142 (43%), Positives = 100/142 (70%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
GV+F + + +DGK +KLQIWDTAGQE FR+IT SYYRG+ G ++VYD+T +E+FN +
Sbjct: 40 GVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKM 99
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
WL++ +++ S ++ +L+GNK DL +R V+ + + FA + + F+ETSA +TNVE+A
Sbjct: 100 WLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDA 159
Query: 219 FIDTAKEIYEKIQEGVFDITNE 240
F+ A++I E + + + T +
Sbjct: 160 FLTMARQIKESMSQQNLNETTQ 181
Score = 45.2 bits (106), Expect = 2e-06
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
++ +L+GNK DL +R V+ + + FA + + F+ETSA +TNVE+AF+ A++I E +
Sbjct: 112 VLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESM 171
Query: 61 QEGVFDITNE 70
+ + T +
Sbjct: 172 SQQNLNETTQ 181
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 111 bits (279), Expect = 2e-31
Identities = 57/130 (43%), Positives = 83/130 (63%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
GV+F + I++DG + KL IWDTAGQE FR++T SYYRGA G +LVYD+TRR+TF L
Sbjct: 41 GVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDN 100
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
WL + + N ++ ++ REV + EG FAR+H ++F+E SAK V+ A
Sbjct: 101 WLNELETYCTRNDIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCA 160
Query: 219 FIDTAKEIYE 228
F + ++I +
Sbjct: 161 FEELVEKIIQ 170
Score = 52.2 bits (124), Expect = 5e-09
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYE 58
++ ++ REV + EG FAR+H ++F+E SAK V+ AF + ++I +
Sbjct: 113 DIVNMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 170
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 108 bits (271), Expect = 4e-30
Identities = 44/127 (34%), Positives = 79/127 (62%), Gaps = 1/127 (0%)
Query: 107 ITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQH 166
+ ++ LQ+WDTAGQE FRS+T +++R A G LL++D+T +++F ++ W+ + +
Sbjct: 57 SSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQAN 116
Query: 167 SNSNMV-IMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKE 225
+ I+LIGNK+DL +REV + + A ++G+ + ETSA NVE+A
Sbjct: 117 AYCENPDIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDL 176
Query: 226 IYEKIQE 232
I +++++
Sbjct: 177 IMKRMEQ 183
Score = 59.9 bits (144), Expect = 1e-11
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 2 VIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKIQ 61
I+LIGNK+DL +REV + + A ++G+ + ETSA NVE+A I ++++
Sbjct: 123 DIVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRME 182
Query: 62 E 62
+
Sbjct: 183 Q 183
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 99.6 bits (247), Expect = 8e-27
Identities = 55/121 (45%), Positives = 82/121 (67%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
+ ++ + I+LQ+WDTAGQE FRS+ SY R +A A++VYDIT +F T W++D R
Sbjct: 41 TMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRT 100
Query: 166 HSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKE 225
S+++IML+GNK+DL +R+V EEGE A+E ++F+ETSAK NV++ F A
Sbjct: 101 ERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAA 160
Query: 226 I 226
+
Sbjct: 161 L 161
Score = 56.5 bits (135), Expect = 1e-10
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
++IML+GNK+DL +R+V EEGE A+E ++F+ETSAK NV++ F A +
Sbjct: 106 VIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAAL 161
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 96.6 bits (239), Expect = 1e-25
Identities = 48/124 (38%), Positives = 74/124 (59%)
Query: 105 RMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDAR 164
+ + I GK++ L IWDTAGQE F ++ YYR + GA+LVYDIT ++F + W+++ R
Sbjct: 43 KKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELR 102
Query: 165 QHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAK 224
+ + + + ++GNK DL+ R V +E E +A G TSAK +EE F+D K
Sbjct: 103 KMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCK 162
Query: 225 EIYE 228
+ E
Sbjct: 163 RMIE 166
Score = 52.6 bits (125), Expect = 2e-09
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYE 58
+ + ++GNK DL+ R V +E E +A G TSAK +EE F+D K + E
Sbjct: 109 ICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIE 166
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 95.5 bits (236), Expect = 4e-25
Identities = 54/130 (41%), Positives = 85/130 (65%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G F + + +D +K +IWDTAGQE + S+ YYRGA A++VYDIT E+F
Sbjct: 40 GAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKN 99
Query: 159 WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
W+++ ++ ++ N+VI L GNK+DL +R V +E + +A ++ L+FMETSAK + NV E
Sbjct: 100 WVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEI 159
Query: 219 FIDTAKEIYE 228
F+ AK++ +
Sbjct: 160 FMAIAKKLPK 169
Score = 52.7 bits (125), Expect = 2e-09
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYE 58
+VI L GNK+DL +R V +E + +A ++ L+FMETSAK + NV E F+ AK++ +
Sbjct: 112 IVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKLPK 169
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 90.0 bits (222), Expect = 5e-23
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETF-NHLTTW 159
+F + I +D L+I DTAG E F S+ Y + G +LVY + +++F +
Sbjct: 38 DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMR 97
Query: 160 LEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 219
+ R + ++L+GNK DL++ REV EG A E G FMETSAK T V+E F
Sbjct: 98 DQIIRVKRYEKVPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELF 157
Query: 220 IDTAKEIY 227
+ +++
Sbjct: 158 AEIVRQMN 165
Score = 66.9 bits (162), Expect = 2e-14
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
+ ++L+GNK DL++ REV EG A E G FMETSAK T V+E F + +++
Sbjct: 109 VPVILVGNKVDLESEREVSSSEGRALAEEWGCPFMETSAKSKTMVDELFAEIVRQMN 165
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin
(Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 86.1 bits (212), Expect = 1e-21
Identities = 45/125 (36%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-AR 164
+ +DG+++++ I DTAGQE + +I +Y+R G L V+ IT E+F + E R
Sbjct: 44 KVVLDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQILR 103
Query: 165 QHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAK 224
+ N+ +L+GNKSDL+ +R+V EE + A + + ++ETSAK NV++ F D +
Sbjct: 104 VKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMR 163
Query: 225 EIYEK 229
EI +
Sbjct: 164 EIRAR 168
Score = 60.3 bits (145), Expect = 4e-12
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
+ +L+GNKSDL+ +R+V EE + A + + ++ETSAK NV++ F D +EI +
Sbjct: 110 VPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREIRAR 168
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 84.3 bits (207), Expect = 7e-21
Identities = 50/110 (45%), Positives = 73/110 (66%)
Query: 117 QIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLI 176
IWDTAG E FR++ YYRG+A A++VYDIT+ ETF+ L W+ + RQH ++V+ +
Sbjct: 56 LIWDTAGLERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIA 115
Query: 177 GNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 226
GNK DL REV + + + +A +F+ETSAK A N+ E FI+ ++ I
Sbjct: 116 GNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
Score = 55.0 bits (131), Expect = 4e-10
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+V+ + GNK DL REV + + + +A +F+ETSAK A N+ E FI+ ++ I
Sbjct: 110 IVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRI 165
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 84.3 bits (207), Expect = 8e-21
Identities = 31/137 (22%), Positives = 60/137 (43%), Gaps = 13/137 (9%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
+ +DGK + L +WDTAGQE + + Y +L+ + + +F ++ +
Sbjct: 45 NVMVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVSLICFSLVSPASFENVRAKWYPEVR 104
Query: 166 HSNSNMVIMLIGNKSDLDARREVKKE------------EGEVFAREHGLV-FMETSAKLA 212
H N I+L+G K DL ++ ++ +G A+E G V ++E SA
Sbjct: 105 HHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQ 164
Query: 213 TNVEEAFIDTAKEIYEK 229
++ F + + +
Sbjct: 165 RGLKTVFDEAIRAVLCP 181
Score = 56.6 bits (135), Expect = 1e-10
Identities = 15/72 (20%), Positives = 29/72 (40%), Gaps = 13/72 (18%)
Query: 1 MVIMLIGNKSDLDARREVKKEE------------GEVFAREHGLV-FMETSAKLATNVEE 47
I+L+G K DL ++ ++ G A+E G V ++E SA ++
Sbjct: 110 TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKT 169
Query: 48 AFIDTAKEIYEK 59
F + + +
Sbjct: 170 VFDEAIRAVLCP 181
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 84.3 bits (207), Expect = 1e-20
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 13/145 (8%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
+ A + I G+ L ++DTAGQE + + Y L+ + + +F ++
Sbjct: 38 DNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKW 97
Query: 161 EDARQHSNSNMVIMLIGNKSDLDARREVK------------KEEGEVFARE-HGLVFMET 207
H +L+G + DL E E AR+ + ++E
Sbjct: 98 VPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVEC 157
Query: 208 SAKLATNVEEAFIDTAKEIYEKIQE 232
SA ++ F + E +
Sbjct: 158 SALTQKGLKNVFDEAILAALEPPEP 182
Score = 51.5 bits (122), Expect = 8e-09
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 13/75 (17%)
Query: 1 MVIMLIGNKSDLDARREVK------------KEEGEVFARE-HGLVFMETSAKLATNVEE 47
+L+G + DL E E AR+ + ++E SA ++
Sbjct: 108 TPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKN 167
Query: 48 AFIDTAKEIYEKIQE 62
F + E +
Sbjct: 168 VFDEAILAALEPPEP 182
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 82.8 bits (203), Expect = 2e-20
Identities = 54/134 (40%), Positives = 83/134 (61%), Gaps = 3/134 (2%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G F + +TI+ +K +IWDTAGQE F S+ YYR A AL+VYD+T+ ++F
Sbjct: 37 GAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARH 96
Query: 159 WLEDARQHSNSNMVIMLIGNKSDL---DARREVKKEEGEVFAREHGLVFMETSAKLATNV 215
W+++ + ++ +++I L+GNK D+ R+V +EEGE A E GL+F ETSAK NV
Sbjct: 97 WVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENV 156
Query: 216 EEAFIDTAKEIYEK 229
+ F+ ++I K
Sbjct: 157 NDVFLGIGEKIPLK 170
Score = 50.8 bits (120), Expect = 1e-08
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 1 MVIMLIGNKSDL---DARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
++I L+GNK D+ R+V +EEGE A E GL+F ETSAK NV + F+ ++I
Sbjct: 109 IIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 168
Query: 58 EK 59
K
Sbjct: 169 LK 170
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 81.5 bits (200), Expect = 8e-20
Identities = 43/130 (33%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLE 161
F + + +DG + +QIWDTAGQE FRS+ +YRG+ LL + + ++F +L+ W +
Sbjct: 43 FLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK 102
Query: 162 DARQHSNS----NMVIMLIGNKSDLDARREVKKEEGEVFAREHGLV-FMETSAKLATNVE 216
+ +++ + +++GNK D+ R+ EE + + R++G + ETSAK ATNV
Sbjct: 103 EFIYYADVKEPESFPFVILGNKIDISERQVST-EEAQAWCRDNGDYPYFETSAKDATNVA 161
Query: 217 EAFIDTAKEI 226
AF + + +
Sbjct: 162 AAFEEAVRRV 171
Score = 51.1 bits (121), Expect = 9e-09
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLV-FMETSAKLATNVEEAFIDTAKEI 56
+++GNK D+ R+ EE + + R++G + ETSAK ATNV AF + + +
Sbjct: 116 FPFVILGNKIDISERQVST-EEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 171
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 80.8 bits (198), Expect = 1e-19
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLE 161
G + T+ K +K +WD GQ+ R + R YY G G + V D R+ + L
Sbjct: 44 VGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELH 103
Query: 162 DARQH-SNSNMVIMLIGNKSDLDARR---EVKKEEGEVFAREHGLVFMETSAKLATNVEE 217
+ +I++ NK DL E++++ G R+ + A + E
Sbjct: 104 RIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYE 163
Query: 218 AF 219
Sbjct: 164 GL 165
Score = 44.2 bits (103), Expect = 3e-06
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 1 MVIMLIGNKSDLDARR---EVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 49
+I++ NK DL E++++ G R+ + A + E
Sbjct: 114 AIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 165
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 80.9 bits (198), Expect = 1e-19
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
+ ++ ++DG +L I DTAGQE F ++ Y R G LLV+ I R++FN +
Sbjct: 39 IEDSYTKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGK 98
Query: 159 WL-EDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEE 217
+ R + ++L+GNK+DL+++R+V + E F H + + E SAKL NV+E
Sbjct: 99 LFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDE 158
Query: 218 AFIDTAKEIYEKIQE 232
AF + + + ++
Sbjct: 159 AFEQLVRAVRKYQEQ 173
Score = 58.1 bits (139), Expect = 3e-11
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
++L+GNK+DL+++R+V + E F H + + E SAKL NV+EAF + + +
Sbjct: 112 FPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQ 171
Query: 61 QE 62
++
Sbjct: 172 EQ 173
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 80.8 bits (198), Expect = 2e-19
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Query: 93 GSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRET 152
G G + T+ K +KL +WD GQ + R R YY A + V D T ++
Sbjct: 40 GEVVTTKPTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDR 99
Query: 153 FNHLTTWLEDARQH-SNSNMVIMLIGNKSDLDAR---REVKKEEGEVFAREHGLVFMETS 208
+ + L Q + +++ NK D EV KE V ++ + +S
Sbjct: 100 MSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASS 159
Query: 209 AKLATNVEEAFIDTAKEIYEK 229
A + E I E+
Sbjct: 160 AIKGEGITEGLDWLIDVIKEE 180
Score = 44.6 bits (104), Expect = 2e-06
Identities = 13/62 (20%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Query: 1 MVIMLIGNKSDLDAR---REVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
+++ NK D EV KE V ++ + +SA + E I
Sbjct: 119 AALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIK 178
Query: 58 EK 59
E+
Sbjct: 179 EE 180
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 80.1 bits (196), Expect = 3e-19
Identities = 49/133 (36%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
+ + ID + +L I DTAGQE F ++ Y R G LLV+ +T R +F + +
Sbjct: 40 DSYTKQCVIDDRAARLDILDTAGQEEFGAMREQYMRTGEGFLLVFSVTDRGSFEEIYKFQ 99
Query: 161 -EDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 219
+ R ++LIGNK+DLD +R+V +EEG+ AR+ + +ME SAK+ NV++AF
Sbjct: 100 RQILRVKDRDEFPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAF 159
Query: 220 IDTAKEIYEKIQE 232
+ + I K QE
Sbjct: 160 HELVRVIR-KFQE 171
Score = 58.1 bits (139), Expect = 3e-11
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
++LIGNK+DLD +R+V +EEG+ AR+ + +ME SAK+ NV++AF + + I K
Sbjct: 111 FPMILIGNKADLDHQRQVTQEEGQQLARQLKVTYMEASAKIRMNVDQAFHELVRVIR-KF 169
Query: 61 QE 62
QE
Sbjct: 170 QE 171
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 79.7 bits (195), Expect = 3e-19
Identities = 52/130 (40%), Positives = 79/130 (60%), Gaps = 5/130 (3%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAF-RSITRSYYRGAAGALLVYDITRRETFNHLT 157
GV+F R + IDG++IK+Q+WDTAGQE F +S+ + YYR + VYD+T +F+ L
Sbjct: 36 GVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLP 95
Query: 158 TWLEDARQHSNSNMV-IMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT--- 213
W+E+ +QH +N + +L+GNK DL + +V + + FA H + ETSAK
Sbjct: 96 AWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDND 155
Query: 214 NVEEAFIDTA 223
+VE F+ A
Sbjct: 156 HVEAIFMTLA 165
Score = 52.7 bits (125), Expect = 2e-09
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT---NVEEAFIDTA 53
+ +L+GNK DL + +V + + FA H + ETSAK +VE F+ A
Sbjct: 110 IPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVEAIFMTLA 165
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 79.6 bits (195), Expect = 3e-19
Identities = 39/123 (31%), Positives = 65/123 (52%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
+ IDG+ L I DTAGQE + ++ Y R G L V+ I ++F + + E ++
Sbjct: 43 QVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKR 102
Query: 166 HSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKE 225
+S+ V M++ A R V+ + + AR +G+ ++ETSAK VE+AF +E
Sbjct: 103 VKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVRE 162
Query: 226 IYE 228
I +
Sbjct: 163 IRQ 165
Score = 53.8 bits (128), Expect = 1e-09
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYE 58
+ ++L+GNK DL AR ++ + AR +G+ ++ETSAK VE+AF +EI +
Sbjct: 109 VPMVLVGNKCDLAARTVESRQAQD-LARSYGIPYIETSAKTRQGVEDAFYTLVREIRQ 165
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 78.5 bits (192), Expect = 9e-19
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
+ + + +D +Q L+I DTAG E F ++ Y + G LVY IT + TFN L
Sbjct: 38 DSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLR 97
Query: 161 ED-ARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFARE-HGLVFMETSAKLATNVEEA 218
E R ++ ++L+GNK DL+ R V KE+G+ AR+ F+E+SAK NV E
Sbjct: 98 EQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEI 157
Query: 219 FIDTAKEIY 227
F D ++I
Sbjct: 158 FYDLVRQIN 166
Score = 50.8 bits (120), Expect = 1e-08
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFARE-HGLVFMETSAKLATNVEEAFIDTAKEIY 57
+ ++L+GNK DL+ R V KE+G+ AR+ F+E+SAK NV E F D ++I
Sbjct: 109 VPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQIN 166
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 169
Score = 77.8 bits (190), Expect = 2e-18
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 2/126 (1%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-AR 164
ID + L + DTAGQE F ++ Y R G L+VY +T + +F H+ + + R
Sbjct: 44 HTEIDNQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLILR 103
Query: 165 QHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT-NVEEAFIDTA 223
+ ++L+ NK DL R+V +++G+ A ++ + ++ETSAK NV++ F D
Sbjct: 104 VKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLV 163
Query: 224 KEIYEK 229
+ I ++
Sbjct: 164 RVIRQQ 169
Score = 57.0 bits (136), Expect = 8e-11
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT-NVEEAFIDTAKEIYEK 59
++L+ NK DL R+V +++G+ A ++ + ++ETSAK NV++ F D + I ++
Sbjct: 110 FPMILVANKVDLMHLRKVTRDQGKEMATKYNIPYIETSAKDPPLNVDKTFHDLVRVIRQQ 169
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 77.7 bits (190), Expect = 3e-18
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 13/141 (9%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
+ A +T+ GKQ L ++DTAGQE + + Y L+ + + +F ++
Sbjct: 44 DHYAVSVTVGGKQYLLGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEW 103
Query: 161 EDARQHSNSNMVIMLIGNKSDLDARRE------------VKKEEGEVFAREHGLV-FMET 207
+ N+ +LIG + DL + + E+G+ A+E G ++E
Sbjct: 104 VPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVEC 163
Query: 208 SAKLATNVEEAFIDTAKEIYE 228
SA ++ F + I
Sbjct: 164 SALTQKGLKTVFDEAIIAILT 184
Score = 51.9 bits (123), Expect = 5e-09
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
Query: 1 MVIMLIGNKSDLDARRE------------VKKEEGEVFAREHGLV-FMETSAKLATNVEE 47
+ +LIG + DL + + E+G+ A+E G ++E SA ++
Sbjct: 114 VPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKT 173
Query: 48 AFIDTAKEIYE 58
F + I
Sbjct: 174 VFDEAIIAILT 184
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 76.6 bits (187), Expect = 4e-18
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
Query: 91 SSGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRR 150
G G + T++ K I +WD GQ+ R + R Y++ G + V D R
Sbjct: 21 KLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 80
Query: 151 ETFNHL-TTWLEDARQHSNSNMVIMLIGNKS---DLDARREVKKEEGEVFAREHGLVFME 206
E N + + + V+++ NK + E+ + G R
Sbjct: 81 ERVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQA 140
Query: 207 TSAKLATNVEEAFIDTAKEI 226
T A + E + ++
Sbjct: 141 TCATSGDGLYEGLDWLSNQL 160
Score = 42.7 bits (99), Expect = 8e-06
Identities = 7/56 (12%), Positives = 16/56 (28%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+V + + E+ + G R T A + E + ++
Sbjct: 105 LVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQL 160
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 73.6 bits (179), Expect = 6e-17
Identities = 45/123 (36%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
I ++ + ++L +WDTAGQE F +IT++YYRGA +LV+ T RE+F +++W E
Sbjct: 43 QIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREK-VV 101
Query: 166 HSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKE 225
++ L+ NK DL +K EE E A+ L F TS K NV E F A++
Sbjct: 102 AEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEK 161
Query: 226 IYE 228
+
Sbjct: 162 HLQ 164
Score = 47.4 bits (111), Expect = 2e-07
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYE 58
+ L+ NK DL +K EE E A+ L F TS K NV E F A++ +
Sbjct: 107 IPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQ 164
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 184
Score = 72.0 bits (175), Expect = 3e-16
Identities = 52/147 (35%), Positives = 81/147 (55%), Gaps = 6/147 (4%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G +F + + +D + + +QIWDTAGQE F+S+ ++YRGA +LV+D+T TF L +
Sbjct: 36 GADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDS 95
Query: 159 W----LEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATN 214
W L A N +++GNK DL+ R+ K ++ + + ETSAK A N
Sbjct: 96 WRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAIN 155
Query: 215 VEEAFIDTAKEIYEKIQEGVFDITNEV 241
VE+AF A+ + QE ++ NE
Sbjct: 156 VEQAFQTIARNALK--QETEVELYNEF 180
Score = 51.6 bits (122), Expect = 7e-09
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
+++GNK DL+ R+ K ++ + + ETSAK A NVE+AF A+ +
Sbjct: 112 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK-- 169
Query: 61 QEGVFDITNE 70
QE ++ NE
Sbjct: 170 QETEVELYNE 179
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 71.6 bits (174), Expect = 5e-16
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 92 SGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRE 151
E I +DGKQ++L +WDTAG E + + Y L+ + I +
Sbjct: 28 PEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDRLRPLSYPDTDVILMCFSIDSPD 87
Query: 152 TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDARREVKK------------EEGEVFARE 199
+ ++ +H N+ I+L+GNK DL ++ EEG A
Sbjct: 88 SLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANR 147
Query: 200 HGLV-FMETSAKLATNVEEAFIDTAKEIYE 228
G +ME SAK V E F + +
Sbjct: 148 IGAFGYMECSAKTKDGVREVFEMATRAALQ 177
Score = 45.4 bits (106), Expect = 9e-07
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 13/71 (18%)
Query: 1 MVIMLIGNKSDLDARREVKK------------EEGEVFAREHGLV-FMETSAKLATNVEE 47
+ I+L+GNK DL ++ EEG A G +ME SAK V E
Sbjct: 107 VPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 166
Query: 48 AFIDTAKEIYE 58
F + +
Sbjct: 167 VFEMATRAALQ 177
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 71.3 bits (173), Expect = 5e-16
Identities = 44/144 (30%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 94 SSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETF 153
++ G + K +Q+WDTAGQE F+S+ ++YRGA +LVYD+T +F
Sbjct: 32 KATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSF 91
Query: 154 NHLTTWLEDARQHSNSN----MVIMLIGNKSDLDARREVKKEEG-EVFAREHGLV-FMET 207
++ +W ++ H+N N +++GNK D + +++ E+ + A+ G + T
Sbjct: 92 ENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLT 151
Query: 208 SAKLATNVEEAFIDTAKEIYEKIQ 231
SAK A NV+ AF + A+ ++ Q
Sbjct: 152 SAKNAINVDTAFEEIARSALQQNQ 175
Score = 46.2 bits (108), Expect = 5e-07
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MVIMLIGNKSDLDARREVKKEEG-EVFAREHGLV-FMETSAKLATNVEEAFIDTAKEIYE 58
+++GNK D + +++ E+ + A+ G + TSAK A NV+ AF + A+ +
Sbjct: 113 FPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 172
Query: 59 KIQ 61
+ Q
Sbjct: 173 QNQ 175
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 71.2 bits (173), Expect = 5e-16
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDAR 164
TID + + ++I DTAGQE + R G +LVYDIT R +F L
Sbjct: 42 QATIDDEVVSMEILDTAGQE-DTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDE 100
Query: 165 QHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT-NVEEAFIDTA 223
N+ ++L+GNK+DLD R+V EEGE A E F E SA N+ E F +
Sbjct: 101 IKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELC 160
Query: 224 KEIYEK 229
+E+ +
Sbjct: 161 REVRRR 166
Score = 53.9 bits (128), Expect = 1e-09
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLAT-NVEEAFIDTAKEIYEK 59
+ ++L+GNK+DLD R+V EEGE A E F E SA N+ E F + +E+ +
Sbjct: 107 VTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRR 166
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 71.2 bits (173), Expect = 6e-16
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
E ID ++I+L +WDT+G + ++ Y + L+ +DI+R ET + +
Sbjct: 37 ENYTASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKW 96
Query: 161 EDARQHSNSNMVIMLIGNKSDLDA------------RREVKKEEGEVFAREHG-LVFMET 207
+ Q N ++L+G KSDL + V ++G A++ G ++E
Sbjct: 97 KGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIEC 156
Query: 208 SAKLATN-VEEAFIDTAKEIYEK 229
SA + N V + F K
Sbjct: 157 SALQSENSVRDIFHVATLACVNK 179
Score = 48.9 bits (115), Expect = 7e-08
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 14/73 (19%)
Query: 1 MVIMLIGNKSDLDA------------RREVKKEEGEVFAREHG-LVFMETSAKLATN-VE 46
++L+G KSDL + V ++G A++ G ++E SA + N V
Sbjct: 107 TKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVR 166
Query: 47 EAFIDTAKEIYEK 59
+ F K
Sbjct: 167 DIFHVATLACVNK 179
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 69.3 bits (168), Expect = 3e-15
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 4/138 (2%)
Query: 93 GSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRET 152
G+ + I + +WD GQE+ RS +YY ++V D T RE
Sbjct: 38 NEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRER 97
Query: 153 FNHLTTWLEDARQHSNSNMV-IMLIGNKSDLDAR---REVKKEEGEVFAREHGLVFMETS 208
+ L H + +++ NK D+ E+ + ++H
Sbjct: 98 ISVTREELYKMLAHEDLRKAGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACC 157
Query: 209 AKLATNVEEAFIDTAKEI 226
A + + +
Sbjct: 158 ALTGEGLCQGLEWMMSRL 175
Score = 47.7 bits (112), Expect = 2e-07
Identities = 6/59 (10%), Positives = 17/59 (28%), Gaps = 3/59 (5%)
Query: 1 MVIMLIGNKSDLDAR---REVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+++ NK D+ E+ + ++H A + + +
Sbjct: 117 AGLLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 175
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 68.1 bits (165), Expect = 8e-15
Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 2/126 (1%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
+I+ D LQI DT G F ++ R +LVY IT R++ L E +
Sbjct: 42 VISCDKSICTLQITDTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICE 101
Query: 166 HSN--SNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTA 223
++ IML+GNK D REV+ E E AR FMETSAKL NV+E F +
Sbjct: 102 IKGDVESIPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELL 161
Query: 224 KEIYEK 229
+
Sbjct: 162 NLEKRR 167
Score = 59.6 bits (143), Expect = 9e-12
Identities = 26/59 (44%), Positives = 32/59 (54%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
+ IML+GNK D REV+ E E AR FMETSAKL NV+E F + +
Sbjct: 109 IPIMLVGNKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRR 167
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 65.7 bits (159), Expect = 6e-14
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
Query: 103 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 162
G + ++ + KL +WD GQ R RSY+ + V D R+ F L +
Sbjct: 49 GFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTE 108
Query: 163 ARQHSN-SNMVIMLIGNKSDL---DARREVKKEEGEVFAREHGLVFMETSAKLATNVEEA 218
+ S + +++ NK DL E+ + R+ SA V++
Sbjct: 109 LLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDG 168
Query: 219 FIDTAKEI 226
K +
Sbjct: 169 MNWVCKNV 176
Score = 46.9 bits (110), Expect = 3e-07
Identities = 10/58 (17%), Positives = 19/58 (32%), Gaps = 3/58 (5%)
Query: 2 VIMLIGNKSDL---DARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+++ NK DL E+ + R+ SA V++ K +
Sbjct: 119 PVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 176
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 62.8 bits (151), Expect = 6e-13
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 106 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 165
+IT++G++ LQ+ DTAGQ+ + ++Y G +LVY +T ++F +
Sbjct: 44 LITVNGQEYHLQLVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKLLD 103
Query: 166 HSNS-NMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAK 224
+ IML+GNK DL R + EEG+ A F+E+SAK + F
Sbjct: 104 MVGKVQIPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIIL 163
Query: 225 EI 226
E
Sbjct: 164 EA 165
Score = 50.9 bits (120), Expect = 1e-08
Identities = 20/56 (35%), Positives = 27/56 (48%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+ IML+GNK DL R + EEG+ A F+E+SAK + F E
Sbjct: 110 IPIMLVGNKKDLHMERVISYEEGKALAESWNAAFLESSAKENQTAVDVFRRIILEA 165
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 62.4 bits (150), Expect = 9e-13
Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 4/135 (2%)
Query: 99 GVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT 158
G + T++ + KL IWD GQ++ RS R+Y+ G + V D R+
Sbjct: 31 SPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQR 90
Query: 159 W-LEDARQHSNSNMVIMLIGNKSDLDARREV---KKEEGEVFAREHGLVFMETSAKLATN 214
+ + +++ NK DL ++ R H SA +
Sbjct: 91 ELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGED 150
Query: 215 VEEAFIDTAKEIYEK 229
+ +I +
Sbjct: 151 LLPGIDWLLDDISSR 165
Score = 38.9 bits (89), Expect = 2e-04
Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 3/62 (4%)
Query: 1 MVIMLIGNKSDLDARREV---KKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
+++ NK DL ++ R H SA ++ +I
Sbjct: 104 ATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDIS 163
Query: 58 EK 59
+
Sbjct: 164 SR 165
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 60.8 bits (146), Expect = 3e-12
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Query: 101 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 160
E + + IK +WDTAGQE F + YY A A++++D+T R T+ ++ W
Sbjct: 39 EVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWH 98
Query: 161 EDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFI 220
D + N+ I+L GNK D+ R+ K VF R+ L + + SAK N E+ F+
Sbjct: 99 RDLVRVCE-NIPIVLCGNKVDIKDRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFL 155
Query: 221 DTAKEIYEK 229
A+++
Sbjct: 156 WLARKLIGD 164
Score = 49.7 bits (117), Expect = 3e-08
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
+ I+L GNK D+ R+ K VF R+ L + + SAK N E+ F+ A+++
Sbjct: 108 IPIVLCGNKVDIKDRKVKAKSI--VFHRKKNLQYYDISAKSNYNFEKPFLWLARKLIGD 164
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 59.6 bits (143), Expect = 9e-12
Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 5/134 (3%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLE 161
+ + +DG+ + I + AG + + + D + + L L
Sbjct: 40 QYKKEMLVDGQTHLVLIREEAGA--PDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLS 97
Query: 162 DARQHSNSNMVIMLIGNKSD--LDARREVKKEEGEVFARE-HGLVFMETSAKLATNVEEA 218
R + + L+G + + R V + + ET A NV+
Sbjct: 98 SLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRV 157
Query: 219 FIDTAKEIYEKIQE 232
F + A+++ ++
Sbjct: 158 FQEVAQKVVTLRKQ 171
Score = 51.9 bits (123), Expect = 6e-09
Identities = 11/65 (16%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Query: 1 MVIMLIGNKSD--LDARREVKKEEGEVFARE-HGLVFMETSAKLATNVEEAFIDTAKEIY 57
+ + L+G + + R V + + ET A NV+ F + A+++
Sbjct: 107 LALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVV 166
Query: 58 EKIQE 62
++
Sbjct: 167 TLRKQ 171
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 59.0 bits (141), Expect = 2e-11
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 1/140 (0%)
Query: 93 GSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRET 152
G + R I +DG++ L ++D Q+ R + ++VY +T + +
Sbjct: 27 GPEAEAAGHTYDRSIVVDGEEASLMVYDIWEQDGGRWLPGHCMAMGDAYVIVYSVTDKGS 86
Query: 153 FNHLTTWLEDARQHSNSNMVIML-IGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKL 211
F + R+ ++ V ++ +GNKSDL REV +EG A F+ETSA L
Sbjct: 87 FEKASELRVQLRRARQTDDVPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAAL 146
Query: 212 ATNVEEAFIDTAKEIYEKIQ 231
NV+ F ++I +
Sbjct: 147 HHNVQALFEGVVRQIRLRRD 166
Score = 53.6 bits (127), Expect = 1e-09
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEKI 60
+ I+L+GNKSDL REV +EG A F+ETSA L NV+ F ++I +
Sbjct: 106 VPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLRR 165
Query: 61 Q 61
Sbjct: 166 D 166
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 59.0 bits (141), Expect = 2e-11
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 153 FNHLTTWLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLA 212
++ R ++ I+L+GNKSDL REV EG A F+ETSA +
Sbjct: 94 EKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQ 153
Query: 213 TNVEEAFIDTAKEIYEK 229
NV+E F +++ +
Sbjct: 154 HNVKELFEGIVRQVRLR 170
Score = 52.8 bits (125), Expect = 2e-09
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 1 MVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
+ I+L+GNKSDL REV EG A F+ETSA + NV+E F +++ +
Sbjct: 112 IPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLR 170
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 57.0 bits (136), Expect = 7e-11
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDIT-RRETFNHLTTWL 160
G + T+ K +K Q+WD G + R R YY + V D R + +
Sbjct: 37 IGFNVETVTYKNLKFQVWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELV 96
Query: 161 EDARQHSNSNMVIMLIGNKSDLDARR---EVKKEEGEVFAREHGLVFMETSAKLATNVEE 217
+ ++++ NK D++ E+ G ++ +TSA T ++E
Sbjct: 97 AMLEEEELRKAILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDE 156
Query: 218 AFIDTAKEIYEK 229
A + + +
Sbjct: 157 AMEWLVETLKSR 168
Score = 45.1 bits (105), Expect = 1e-06
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 1 MVIMLIGNKSDLDARR---EVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIY 57
++++ NK D++ E+ G ++ +TSA T ++EA + +
Sbjct: 107 AILVVFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETLK 166
Query: 58 EK 59
+
Sbjct: 167 SR 168
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 55.9 bits (133), Expect = 2e-10
Identities = 19/140 (13%), Positives = 40/140 (28%), Gaps = 11/140 (7%)
Query: 91 SSGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRR 150
+ + + + IK +D G R + + Y+ G + + D
Sbjct: 21 KNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADP 80
Query: 151 ETFNHLTTWL-EDARQHSNSNMVIMLIGNKSDLDARREVKK----------EEGEVFARE 199
E F+ L ++ +++GNK D + + +
Sbjct: 81 ERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLNTTGSQRIEGQ 140
Query: 200 HGLVFMETSAKLATNVEEAF 219
+ S + EAF
Sbjct: 141 RPVEVFMCSVVMRNGYLEAF 160
Score = 33.1 bits (74), Expect = 0.016
Identities = 5/37 (13%), Positives = 10/37 (27%)
Query: 13 DARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 49
A + + + + S + EAF
Sbjct: 124 SALGLLNTTGSQRIEGQRPVEVFMCSVVMRNGYLEAF 160
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 53.9 bits (128), Expect = 8e-10
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 104 ARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDA 163
M I + +++WD GQ FRS+ Y RG + + + D +E L +
Sbjct: 37 FNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNL 96
Query: 164 RQHSN-SNMVIMLIGNKSDLDA---RREVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 219
+ ++++GNK DL +E+ ++ ++ + S K N++
Sbjct: 97 LDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITL 156
Score = 45.4 bits (106), Expect = 9e-07
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 1 MVIMLIGNKSDLDA---RREVKKEEGEVFAREHGLVFMETSAKLATNVEEAF 49
+ ++++GNK DL +E+ ++ ++ + S K N++
Sbjct: 105 IPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITL 156
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 49.5 bits (117), Expect = 4e-08
Identities = 19/138 (13%), Positives = 39/138 (28%), Gaps = 13/138 (9%)
Query: 103 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 162
G + K + ++ D GQ + R + L + + +
Sbjct: 33 GIHEYDFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFDQVLMEDRQTNR 92
Query: 163 A-----------RQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKL 211
SN+ I+L NK+DL + + F G +
Sbjct: 93 LTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEFEGDPHCLRDVQ- 151
Query: 212 ATNVEEAFIDTAKEIYEK 229
+ E F ++ ++
Sbjct: 152 -KFLVECFRGKRRDQQQR 168
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 45.8 bits (107), Expect = 7e-07
Identities = 21/141 (14%), Positives = 36/141 (25%), Gaps = 16/141 (11%)
Query: 102 FGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL- 160
+ + +D G R + ++Y G + + D E L
Sbjct: 45 LHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELD 104
Query: 161 EDARQHSNSNMVIMLIGNKSDLDARREV---------------KKEEGEVFAREHGLVFM 205
+ +N+ I+++GNK D K L
Sbjct: 105 SLMTDETIANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVF 164
Query: 206 ETSAKLATNVEEAFIDTAKEI 226
S E F A+ I
Sbjct: 165 MCSVLKRQGYGEGFRWMAQYI 185
Score = 34.3 bits (77), Expect = 0.007
Identities = 8/51 (15%), Positives = 11/51 (21%)
Query: 6 IGNKSDLDARREVKKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEI 56
+ L + K L S E F A+ I
Sbjct: 135 LREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 185
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 44.6 bits (104), Expect = 2e-06
Identities = 21/167 (12%), Positives = 39/167 (23%), Gaps = 37/167 (22%)
Query: 100 VEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT- 158
G K + +++D GQ + R + G + ++ +
Sbjct: 28 AGTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE 87
Query: 159 ----------WLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHGLVFM--- 205
+ ++ I+L NK DL + K + G
Sbjct: 88 MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEA 147
Query: 206 -----------------------ETSAKLATNVEEAFIDTAKEIYEK 229
T A NV+ F I +
Sbjct: 148 AAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 194
Score = 25.3 bits (54), Expect = 6.1
Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 6 IGNKSDLDARREVKKEEGEVFAR--EHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
G+ + +A ++ + ++ R + T A NV+ F I +
Sbjct: 139 AGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKN 194
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 44.2 bits (103), Expect = 4e-06
Identities = 19/164 (11%), Positives = 38/164 (23%), Gaps = 37/164 (22%)
Query: 103 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDIT-----------RRE 151
G D + + ++ D GQ + R + + + ++
Sbjct: 34 GIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENR 93
Query: 152 TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDARREVKKEEGEVFAREHG---------- 201
+ N ++L NK DL + + + F G
Sbjct: 94 MEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAARE 153
Query: 202 ----------------LVFMETSAKLATNVEEAFIDTAKEIYEK 229
+ T A N+ F I +
Sbjct: 154 FILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL 197
Score = 26.1 bits (56), Expect = 3.3
Identities = 6/41 (14%), Positives = 10/41 (24%)
Query: 19 KKEEGEVFAREHGLVFMETSAKLATNVEEAFIDTAKEIYEK 59
K + + T A N+ F I +
Sbjct: 157 KMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQL 197
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 34.6 bits (78), Expect = 0.005
Identities = 11/146 (7%), Positives = 39/146 (26%), Gaps = 12/146 (8%)
Query: 92 SGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRE 151
+ + + + I + + + A + V D +
Sbjct: 26 RDTQTSITDSSAIYKVNNNRGNSLTLIDLPGHESLRFQLLDRFKSSARAVVFVVDSAAFQ 85
Query: 152 TF----NHLTTWLEDARQHSNSNMVIMLIGNKSDL-------DARREVKKE-EGEVFARE 199
+ ++ +++ NK D+ +++++KE R
Sbjct: 86 REVKDVAEFLYQVLIDSMALKNSPSLLIACNKQDIAMAKSAKLIQQQLEKELNTLRVTRS 145
Query: 200 HGLVFMETSAKLATNVEEAFIDTAKE 225
+++S+ + + +
Sbjct: 146 AAPSTLDSSSTAPAQLGKKGKEFEFS 171
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB),
C-terminal domain {Aspergillus kawachii [TaxId: 40384]}
Length = 162
Score = 25.6 bits (56), Expect = 4.3
Identities = 9/45 (20%), Positives = 13/45 (28%)
Query: 84 NPSLPSGSSGSSSGGGVEFGARMITIDGKQIKLQIWDTAGQEAFR 128
PS SG S + R I + Q+ D +
Sbjct: 4 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLK 48
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 204
Score = 25.3 bits (55), Expect = 5.6
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 13/53 (24%)
Query: 104 ARMITIDGKQIKLQ-------IWDTAGQEAFRSITRSYYRGAA---GALLVYD 146
AR ITI+ ++ + D G + ++ GAA GA+LV
Sbjct: 50 ARGITINTAHVEYETAKRHYSHVDCPGHADY---IKNMITGAAQMDGAILVVS 99
>d1huwa_ a.26.1.1 (A:) Growth hormone, somatotropin {Human (Homo
sapiens) [TaxId: 9606]}
Length = 191
Score = 25.2 bits (55), Expect = 7.3
Identities = 4/52 (7%), Positives = 16/52 (30%)
Query: 47 EAFIDTAKEIYEKIQEGVFDITNEANGIKIGPQHSPNNPSLPSGSSGSSSGG 98
+ + +Y+ +++ I ++ G + ++S
Sbjct: 101 LVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHN 152
>d2j5wa3 b.6.1.3 (A:347-553) Ceruloplasmin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 207
Score = 24.7 bits (53), Expect = 9.6
Identities = 9/83 (10%), Positives = 21/83 (25%), Gaps = 13/83 (15%)
Query: 77 GPQHSPNNPSLPSGSSGSSSGGGVEFGARMITIDGK-QIKLQIWDTAG--QEAFRSITRS 133
G + + NN + + V A + + + G + +
Sbjct: 114 GVRFNKNNEGTYYSPNYNPQSRSVPPSASHVAPTETFTYEWTVPKEVGPTNADPVCLAKM 173
Query: 134 Y----------YRGAAGALLVYD 146
Y + G G + +
Sbjct: 174 YYSAVDPTKDIFTGLIGPMKICK 196
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.364
Gapped
Lambda K H
0.267 0.0467 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 878,677
Number of extensions: 40717
Number of successful extensions: 264
Number of sequences better than 10.0: 1
Number of HSP's gapped: 242
Number of HSP's successfully gapped: 114
Length of query: 245
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 162
Effective length of database: 1,268,006
Effective search space: 205416972
Effective search space used: 205416972
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 52 (24.5 bits)