BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13401
(101 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1
Length = 515
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKWWCKF----CPENHKAKKT 77
+L+G WPNTYT+TKAL E ++ EG +L IA+ RP++ W F N +
Sbjct: 195 KLIGDWPNTYTYTKALGEVVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLI 254
Query: 78 ITLSVDHLRPVLASPM 93
I LR + A+PM
Sbjct: 255 IAAGKGFLRSIRATPM 270
>sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster
GN=CG5065 PE=3 SV=1
Length = 625
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 11 LDEEANCQHWTELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
L E+ Q L+GK PNTYTFTKALAE + E +LP+A+ RP++
Sbjct: 299 LPEDILDQLTPRLIGKRPNTYTFTKALAEHMLLKEAGNLPVAIVRPSI 346
>sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1
Length = 515
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTYT+TKALAE ++ EG L IA+ RP++ W
Sbjct: 195 KLIGDRPNTYTYTKALAEYVVQQEGSKLNIAIVRPSIVGASW 236
>sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1
Length = 515
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKWWCKFCP--ENHKAKKTIT 79
+L+ WPN YT+TKAL E ++ E R+L IA+ RP++ W F +N I
Sbjct: 195 KLIRDWPNIYTYTKALGEMVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGII 254
Query: 80 LSV--DHLRPVLASPM 93
++ LR + A+PM
Sbjct: 255 IATGKGFLRAIKATPM 270
>sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1
Length = 515
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTYT+TKALAE ++ EG L A+ RP++ W
Sbjct: 195 KLIGDRPNTYTYTKALAEYVVQQEGARLNTAIIRPSIVGASW 236
>sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1
Length = 515
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTY +TKALAE ++ EG L +A+ RP++ W
Sbjct: 195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASW 236
>sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1
Length = 515
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTY +TKALAE ++ EG L +A+ RP++ W
Sbjct: 195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASW 236
>sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1
Length = 515
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTY +TKALAE ++ EG L +A+ RP++ W
Sbjct: 195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASW 236
>sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1
Length = 515
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
+L+G PNTY +TKALAE ++ EG L +A+ RP++ W
Sbjct: 195 KLIGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASW 236
>sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1
Length = 515
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 22 ELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKWWCKF----CPENHKAKKT 77
+L+G PNTYT+TKAL E ++ E +L +A+ RP++ W F N +
Sbjct: 195 KLIGDRPNTYTYTKALGEIVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLI 254
Query: 78 ITLSVDHLRPVLASPM 93
I LR + A+PM
Sbjct: 255 IATGKGFLRSIKATPM 270
>sp|Q960W6|FACR3_DROME Putative fatty acyl-CoA reductase CG8306 OS=Drosophila melanogaster
GN=CG8306 PE=2 SV=1
Length = 516
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 6 RIRSTLDEEANCQHWTELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKW 63
++ TL+++A + +LL PNTYTFTK LAE + P + RP++ + W
Sbjct: 182 QLSETLNDDALKELEPKLLKDHPNTYTFTKHLAEHEVANVASKFPCGIVRPSMITAAW 239
>sp|Q9XGY7|FAR_SIMCH Alcohol-forming fatty acyl-CoA reductase OS=Simmondsia chinensis
PE=1 SV=1
Length = 493
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 7 IRSTLDEEA--NCQHWTELLGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
I+ST+ + +HW WPN Y FTKAL E + D+P+ + RP +
Sbjct: 217 IKSTMKDMGIERARHW-----GWPNVYVFTKALGEMLLMQYKGDIPLTIIRPTI 265
>sp|B9TSP7|FACR6_ARATH Fatty acyl-CoA reductase 6, chloroplastic OS=Arabidopsis thaliana
GN=FAR6 PE=2 SV=1
Length = 548
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 27 WPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
W N+YTFTKA+ E I + +LP+ + RP++
Sbjct: 296 WENSYTFTKAIGEAVIHSKRGNLPVVIIRPSI 327
>sp|A1ZAI3|FACR2_DROME Putative fatty acyl-CoA reductase CG8303 OS=Drosophila melanogaster
GN=CG8303 PE=2 SV=2
Length = 620
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 28 PNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
PNTYTFTK L+E+ + E LP A+ RP++
Sbjct: 313 PNTYTFTKNLSENLLMAEMSGLPAAIVRPSI 343
>sp|Q0WRB0|FACR5_ARATH Probable fatty acyl-CoA reductase 5 OS=Arabidopsis thaliana GN=FAR5
PE=2 SV=1
Length = 496
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 24 LGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
L WPNTY FTK++ E + +LP+ + RP +
Sbjct: 231 LHGWPNTYVFTKSMGEMLLGKHKENLPLVIIRPTM 265
>sp|Q93ZB9|FACR3_ARATH Fatty acyl-CoA reductase 3 OS=Arabidopsis thaliana GN=FAR3 PE=2
SV=1
Length = 493
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 27 WPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
WPNTY FTKA+ E + + +L + + RP++
Sbjct: 237 WPNTYVFTKAMGEMMVGTKRENLSLVLLRPSI 268
>sp|Q39152|FACR1_ARATH Fatty acyl-CoA reductase 1 OS=Arabidopsis thaliana GN=FAR1 PE=2
SV=1
Length = 491
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 24 LGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
L WPNTY FTKA+ E + +LP+ + RP +
Sbjct: 228 LHGWPNTYVFTKAMGEMLMGKYRENLPLVIIRPTM 262
>sp|Q1PEI6|FACR8_ARATH Fatty acyl-CoA reductase 8 OS=Arabidopsis thaliana GN=FAR8 PE=2
SV=1
Length = 496
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 24 LGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
L WPNTY FTK++ E + +LP+ + RP +
Sbjct: 231 LHGWPNTYVFTKSMGEMLLGNHKENLPLVIIRPTM 265
>sp|Q9FMQ9|FACR7_ARATH Putative fatty acyl-CoA reductase 7 OS=Arabidopsis thaliana GN=FAR7
PE=3 SV=1
Length = 409
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 27 WPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
WPNTY FTKA+ E + +PI + RP +
Sbjct: 160 WPNTYVFTKAMGEMLLGHYRETMPIVIIRPTI 191
>sp|Q9LXN3|FACR4_ARATH Probable fatty acyl-CoA reductase 4 OS=Arabidopsis thaliana GN=FAR4
PE=2 SV=1
Length = 493
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 24 LGKWPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
L WPNTY FTK++ E + +LPI + RP +
Sbjct: 230 LHGWPNTYVFTKSMGEMLLGNYRENLPIVIIRPTM 264
>sp|Q08891|FACR2_ARATH Fatty acyl-CoA reductase 2 OS=Arabidopsis thaliana GN=FAR2 PE=2
SV=2
Length = 616
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 27 WPNTYTFTKALAEDAIRIEGRDLPIAVFRPAV 58
W +TY FTKA+ E I D+P+ + RP+V
Sbjct: 353 WQDTYVFTKAMGEMMINSTRGDVPVVIIRPSV 384
>sp|Q8R4V1|NFAM1_MOUSE NFAT activation molecule 1 OS=Mus musculus GN=Nfam1 PE=1 SV=1
Length = 264
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 29 NTYTFTKALAEDAIRIEGRDLPIAVFRPAVRSRKWW-----CKFCP--ENHKAKKTITLS 81
NT F ED R++ RDLP+ +F + R+ W C+ P ENH + LS
Sbjct: 57 NTDVFFSCRIEDFTRLQ-RDLPVKLFHTDIHGRRRWEKQINCQHRPGMENHTRDCMVKLS 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,000,360
Number of Sequences: 539616
Number of extensions: 1247580
Number of successful extensions: 2496
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2474
Number of HSP's gapped (non-prelim): 24
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)