BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13403
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49735|MCM2_DROME DNA replication licensing factor Mcm2 OS=Drosophila melanogaster
GN=Mcm2 PE=1 SV=1
Length = 887
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 90/101 (89%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
Y+ ++Q TGSLPIT+RHIES+IRM++AHA+MHLRE+V E DV+MAIRMMLESF++ Q
Sbjct: 724 YAQLRQESFATGSLPITVRHIESVIRMSEAHARMHLRENVMEADVSMAIRMMLESFIEAQ 783
Query: 96 KYSVMKQMKQTFQKYLSFKKDTTELLYYILRQMTLDQLIHI 136
K+SVMK+M+ TFQKYLSF+KD +ELL++ILRQ+TLDQL +I
Sbjct: 784 KFSVMKKMRSTFQKYLSFQKDHSELLFFILRQLTLDQLAYI 824
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 40/43 (93%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMK 43
M++AHA+MHLRE+V E DV+MAIRMMLESF++ QK+SVMK+M+
Sbjct: 750 MSEAHARMHLRENVMEADVSMAIRMMLESFIEAQKFSVMKKMR 792
>sp|P49736|MCM2_HUMAN DNA replication licensing factor MCM2 OS=Homo sapiens GN=MCM2 PE=1
SV=4
Length = 904
Score = 142 bits (359), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 61/100 (61%), Positives = 86/100 (86%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
YS +++ TGS+PIT+RHIESMIRMA+AHA++HLR++V EDDVNMAIR+MLESF+DTQ
Sbjct: 747 YSDLRKESMATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFIDTQ 806
Query: 96 KYSVMKQMKQTFQKYLSFKKDTTELLYYILRQMTLDQLIH 135
K+SVM+ M++TF +YLSF++D ELL +IL+Q+ +Q+ +
Sbjct: 807 KFSVMRSMRKTFARYLSFRRDNNELLLFILKQLVAEQVTY 846
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 42/44 (95%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
MA+AHA++HLR++V EDDVNMAIR+MLESF+DTQK+SVM+ M++
Sbjct: 773 MAEAHARIHLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRK 816
>sp|P55861|MCM2_XENLA DNA replication licensing factor mcm2 OS=Xenopus laevis GN=mcm2
PE=1 SV=2
Length = 886
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 99/158 (62%), Gaps = 36/158 (22%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
YS +++ TGS+PIT+RHIESMIRMA+AHA+MHLR++V EDDVNMAIR+MLESF+DTQ
Sbjct: 729 YSDLRKESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQ 788
Query: 96 KYSVMKQMKQTFQKYLSFKKDTTELLYYILRQMTLDQLIHIPFVSQTFQKYLSFKKDTTE 155
K+SVM+ M++TF +YL+F++D ELL ++L+Q+ +Q+
Sbjct: 789 KFSVMRSMRKTFARYLAFRRDNNELLLFVLKQLIAEQVT--------------------- 827
Query: 156 LLYYILRQMTLDQLMYIRGVHGVVIDTVEIHEKDFKEK 193
Y R +G DT+E+ EKD +K
Sbjct: 828 ---------------YQRNRYGAQQDTIEVPEKDLVDK 850
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 42/44 (95%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
MA+AHA+MHLR++V EDDVNMAIR+MLESF+DTQK+SVM+ M++
Sbjct: 755 MAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQKFSVMRSMRK 798
>sp|P97310|MCM2_MOUSE DNA replication licensing factor MCM2 OS=Mus musculus GN=Mcm2 PE=1
SV=3
Length = 904
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 107/153 (69%), Gaps = 19/153 (12%)
Query: 5 HAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQ 64
+AK +R +++ D + RM YS +++ TGS+PIT+RHIESMIRMA+
Sbjct: 726 YAKERVRPKLNQMDQDKVARM----------YSDLRKESMATGSIPITVRHIESMIRMAE 775
Query: 65 AHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQTFQKYLSFKKDTTELLYYI 124
AHA+MHLR++V EDDVNMAIR+M+ESF+DTQK+SVM+ M++TF +YLSF++D +LL +I
Sbjct: 776 AHARMHLRDYVMEDDVNMAIRVMMESFIDTQKFSVMRSMRKTFARYLSFRRDNNDLLLFI 835
Query: 125 LRQMTLDQLIHIPFVSQTFQKY-LSFKKDTTEL 156
L+Q+ +Q+ T+Q+ ++DT E+
Sbjct: 836 LKQLVAEQV--------TYQRNRFGAQQDTIEI 860
Score = 73.9 bits (180), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/44 (70%), Positives = 42/44 (95%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
MA+AHA+MHLR++V EDDVNMAIR+M+ESF+DTQK+SVM+ M++
Sbjct: 773 MAEAHARMHLRDYVMEDDVNMAIRVMMESFIDTQKFSVMRSMRK 816
>sp|Q6DIH3|MCM2_XENTR DNA replication licensing factor mcm2 OS=Xenopus tropicalis GN=mcm2
PE=2 SV=1
Length = 884
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 84/97 (86%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
YS +++ TGS+PIT+RHIESMIRMA+AHA+MHLR++V EDDVNMAIR+MLESF+DTQ
Sbjct: 727 YSDLRKESMATGSIPITVRHIESMIRMAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQ 786
Query: 96 KYSVMKQMKQTFQKYLSFKKDTTELLYYILRQMTLDQ 132
K+SVM+ M++TF +YL+F++D ELL ++L+Q+ +Q
Sbjct: 787 KFSVMRSMRKTFARYLAFRRDNNELLLFVLKQLVAEQ 823
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 42/44 (95%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
MA+AHA+MHLR++V EDDVNMAIR+MLESF+DTQK+SVM+ M++
Sbjct: 753 MAEAHARMHLRDYVVEDDVNMAIRVMLESFIDTQKFSVMRSMRK 796
>sp|P40377|MCM2_SCHPO DNA replication licensing factor mcm2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm2 PE=1 SV=1
Length = 830
Score = 79.0 bits (193), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 13 HVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLR 72
H + + V ++ M E + ++ YS M++ TGS PIT+RH+ES IR+++A AKM L
Sbjct: 732 HFAREKVFPRLQQMDEEKI-SRLYSDMRRESLATGSYPITVRHLESAIRLSEAFAKMQLS 790
Query: 73 EHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQTFQKYL 111
E V ++ AI+++++SFV+ QK SV + + +TF KYL
Sbjct: 791 EFVRPSHIDKAIQVIIDSFVNAQKMSVKRSLSRTFAKYL 829
Score = 37.4 bits (85), Expect = 0.060, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
+++A AKM L E V ++ AI+++++SFV+ QK SV + + +
Sbjct: 780 LSEAFAKMQLSEFVRPSHIDKAIQVIIDSFVNAQKMSVKRSLSR 823
>sp|P29469|MCM2_YEAST DNA replication licensing factor MCM2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM2 PE=1 SV=2
Length = 868
Score = 75.9 bits (185), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 59/78 (75%)
Query: 33 TQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFV 92
++ Y+ +++ TGS PIT+RH+ES++R+A++ AKM L E VS D++ AI+++++SFV
Sbjct: 787 SRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFV 846
Query: 93 DTQKYSVMKQMKQTFQKY 110
D QK SV +Q++++F Y
Sbjct: 847 DAQKVSVRRQLRRSFAIY 864
Score = 44.3 bits (103), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 34/44 (77%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQ 44
+A++ AKM L E VS D++ AI+++++SFVD QK SV +Q+++
Sbjct: 816 IAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQLRR 859
>sp|D3ZVK1|MCM8_RAT DNA helicase MCM8 OS=Rattus norvegicus GN=Mcm8 PE=2 SV=1
Length = 830
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
Y +++ Q GS PIT R +ES+IR+ +A A++ LRE +++D I +M S + T
Sbjct: 683 YLELRKQSQRVGSSPITTRQLESLIRLTEARARLELREEATKEDAEDIIEIMKHSMLGT 741
>sp|Q0V9Q6|MCM8_XENTR DNA helicase MCM8 OS=Xenopus tropicalis GN=mcm8 PE=2 SV=1
Length = 843
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
Y +++ Q S PIT R +ES+IR+ +A A++ LRE ++DD +++M
Sbjct: 684 YLELRKQNQGIDSTPITTRQLESLIRLTEARARLELREKATKDDAEEVVQIM-------- 735
Query: 96 KYSVMKQMKQTFQK 109
KYS++ F K
Sbjct: 736 KYSLLGTFSDEFGK 749
>sp|Q9CWV1|MCM8_MOUSE DNA helicase MCM8 OS=Mus musculus GN=Mcm8 PE=1 SV=3
Length = 833
Score = 48.9 bits (115), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
Y +++ Q GS PIT R +ES+IR+ +A A++ LRE + +D I +M S + T
Sbjct: 686 YLELRKQSQRVGSSPITTRQLESLIRLTEARARLELREEATREDAEDIIEIMKHSMLGT 744
>sp|Q43704|MCM31_MAIZE DNA replication licensing factor MCM3 homolog 1 OS=Zea mays GN=ROA1
PE=2 SV=2
Length = 768
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 41 QMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
K G+LPIT R +ES+IR++ AHAKM LR V + DV A++++
Sbjct: 594 NAKSGGGTLPITARTLESIIRLSTAHAKMKLRHEVLKSDVEAALQVL 640
>sp|Q5F310|MCM8_XENLA DNA helicase MCM8 OS=Xenopus laevis GN=mcm8 PE=2 SV=2
Length = 831
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
Y +++ Q S PIT R +ES+IR+ +A A++ LRE +++D +++M
Sbjct: 684 YLELRKQNQGIDSTPITTRQLESLIRLTEARARLELREKATKEDAEEVVQIM-------- 735
Query: 96 KYSVMKQMKQTFQKYLSFKK 115
KYS++ F K L F++
Sbjct: 736 KYSLLGTFSDEFGK-LDFQR 754
>sp|Q9FL33|MCM3_ARATH DNA replication licensing factor MCM3 homolog OS=Arabidopsis
thaliana GN=MCM3 PE=2 SV=1
Length = 776
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 44 QVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
+ G+LPIT R +E++IR+A AHAKM L V++ D A+++M
Sbjct: 587 KTGGTLPITARTLETIIRLATAHAKMKLSSEVTKADAEAALKLM 630
>sp|Q9SX03|MCM33_MAIZE DNA replication licensing factor MCM3 homolog 3 OS=Zea mays GN=ROA3
PE=2 SV=1
Length = 768
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 41 QMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
K G+LPIT R +E++IR++ AHAKM LR V + DV A++++
Sbjct: 594 NAKSGGGTLPITARTLETIIRLSTAHAKMKLRHEVLKSDVEAALQVL 640
>sp|Q9SX04|MCM32_MAIZE DNA replication licensing factor MCM3 homolog 2 OS=Zea mays GN=ROA2
PE=2 SV=1
Length = 768
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 41 QMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
K G+LPIT R +E++IR++ AHAKM LR V + DV A++++
Sbjct: 594 NAKSGGGTLPITARTLETIIRLSTAHAKMKLRHEVLKSDVEAALQVL 640
>sp|I0IUP3|MCM8_CHICK DNA helicase MCM8 OS=Gallus gallus GN=MCM8 PE=1 SV=1
Length = 830
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 4 AHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMA 63
+A+ ++ H+S + + L+ F Y +++ Q S PIT R +ES+IR+
Sbjct: 661 GYARQYVHPHLSPEAAQV-----LQEF-----YLELRKQNQGASSTPITTRQLESLIRLT 710
Query: 64 QAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQTFQKYLSFKK 115
+A +++ LRE +++D I +M KYS++ F K L F++
Sbjct: 711 EARSRLELREKCTKEDAEDVIEIM--------KYSMLGTYSDEFGK-LDFER 753
>sp|P29458|MCM4_SCHPO DNA replication licensing factor mcm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm4 PE=1 SV=2
Length = 931
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Query: 5 HAKMHLREHVSEDDVNMAIRMMLESFVDTQKYS--VMKQMKQVTGSLPITIRHIESMIRM 62
+A+ ++ +SE+ A + ++ ++V +K V K++T T R +ESMIR+
Sbjct: 730 YARNNINPVISEE----AAKELVNAYVGMRKLGEDVRASEKRITA----TTRQLESMIRL 781
Query: 63 AQAHAKMHLREHVSEDDVNMAIRMMLESFVD 93
++AHAKMHLR V DV A R++ + D
Sbjct: 782 SEAHAKMHLRNVVEVGDVLEAARLIKTAIKD 812
>sp|E1BPX4|MCM8_BOVIN DNA helicase MCM8 OS=Bos taurus GN=MCM8 PE=3 SV=2
Length = 816
Score = 45.4 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
Y +++ Q S PIT R +ES+IR+ +A A++ LRE +++D E V+
Sbjct: 669 YLELRKQSQRLSSSPITTRQLESLIRLTEARARLELREEATKEDA--------EDIVEIM 720
Query: 96 KYSVMKQMKQTF 107
KYS++ F
Sbjct: 721 KYSMLGTYSDEF 732
>sp|P33992|MCM5_HUMAN DNA replication licensing factor MCM5 OS=Homo sapiens GN=MCM5 PE=1
SV=5
Length = 734
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R+A+A +KM L+ +E DV A+R+ S +D
Sbjct: 605 SIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDA 651
>sp|Q9UJA3|MCM8_HUMAN DNA helicase MCM8 OS=Homo sapiens GN=MCM8 PE=1 SV=2
Length = 840
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQ 95
Y +++ Q S PIT R +ES+IR+ +A A++ LRE +++D E V+
Sbjct: 693 YLELRKQSQRLNSSPITTRQLESLIRLTEARARLELREEATKEDA--------EDIVEIM 744
Query: 96 KYSVMKQMKQTFQKYLSFKK 115
KYS++ F L F++
Sbjct: 745 KYSMLGTYSDEFGN-LDFER 763
>sp|Q0V8B7|MCM5_BOVIN DNA replication licensing factor MCM5 OS=Bos taurus GN=MCM5 PE=2
SV=1
Length = 734
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R+A+A +KM L+ +E DV A+R+ S +D
Sbjct: 605 SIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDA 651
>sp|P49718|MCM5_MOUSE DNA replication licensing factor MCM5 OS=Mus musculus GN=Mcm5 PE=2
SV=1
Length = 733
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R+A+A +KM L+ +E DV A+R+ S +D
Sbjct: 604 SIPITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDA 650
>sp|P30665|MCM4_YEAST DNA replication licensing factor MCM4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM4 PE=1 SV=2
Length = 933
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 52 TIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVD 93
T R +ESMIR+A+AHAKM L+ V +DV A+R++ + D
Sbjct: 794 TTRQLESMIRLAEAHAKMKLKNVVELEDVQEAVRLIRSAIKD 835
>sp|Q6PCI7|MCM5B_XENLA DNA replication licensing factor mcm5-B OS=Xenopus laevis GN=mcm5-b
PE=2 SV=1
Length = 735
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R++++ KM L+ V+E DV A+R+ S +D
Sbjct: 606 SIPITVRQLEAVVRISESLGKMKLQPFVTETDVEEALRLFQVSTLDA 652
>sp|Q57809|Y363_METJA Uncharacterized MCM-type protein MJ0363 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0363 PE=3 SV=1
Length = 759
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 34 QKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
+ Y +++M + G+ I+ R + S+IR+A AHAK+ L E V D AIR++
Sbjct: 611 EYYVSVRKMSEAKGTFGISARQLGSIIRLAVAHAKLRLSEVVKAVDAEEAIRLV 664
>sp|Q24849|MCM3_ENTHI DNA replication licensing factor MCM3 OS=Entamoeba histolytica
GN=MCM3 PE=3 SV=1
Length = 597
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQTF 107
+LPIT R ++S+IR+A+AHA++ + + E D +A++++L + + ++ + +
Sbjct: 487 TLPITARALDSLIRLAEAHARIRGSDTIDEIDAQVAVQLIL---MKIWEGNITTHIARKV 543
Query: 108 QKYLSFKKDTTELLYYILRQMTLDQLIHIPFVSQ-TFQKY---LSFKKDTTELLYY 159
++YL T EL+ + D ++ I + + T K LSF D E Y
Sbjct: 544 REYL-----TNELIAECKDVIQFDDILSICGIDKPTLMKILPQLSFGYDEDEEFVY 594
>sp|Q26454|MCM4_DROME DNA replication licensing factor MCM4 OS=Drosophila melanogaster
GN=dpa PE=1 SV=2
Length = 866
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 9 HLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAK 68
+ REH+S + A + +++++VD M+++ G + R +ES+IR+++AHAK
Sbjct: 695 YAREHLSPTLSDEAQQRLIQAYVD------MRKVGAGRGQISAYPRQLESLIRLSEAHAK 748
Query: 69 MHLREHVSEDDVNMAIRMMLESF 91
+ L V DV A R+ E+
Sbjct: 749 VRLSNQVELLDVEEAWRLHREAL 771
>sp|P55862|MCM5A_XENLA DNA replication licensing factor mcm5-A OS=Xenopus laevis GN=mcm5-a
PE=1 SV=2
Length = 735
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R++++ KM L+ +E DV A+R+ S +D
Sbjct: 606 SIPITVRQLEAIVRISESLGKMKLQPFATETDVEEALRLFQVSTLDA 652
>sp|Q561P5|MCM5_XENTR DNA replication licensing factor mcm5 OS=Xenopus tropicalis GN=mcm5
PE=2 SV=1
Length = 735
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E+++R++++ KM L+ +E DV A+R+ S +D
Sbjct: 606 SIPITVRQLEAIVRISESLGKMKLQPFATETDVEEALRLFQVSTLDA 652
>sp|P29496|MCM5_YEAST Minichromosome maintenance protein 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MCM5 PE=1 SV=1
Length = 775
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 22 AIRMMLESFVDTQKYSVMKQMKQVT-GSLPITIRHIESMIRMAQAHAKMHLREHVSEDDV 80
A + +FV +K ++ +++ S+PITIR +E++IR+ ++ AK+ L E V
Sbjct: 618 AAEKLSSNFVTIRKQLLINELESTERSSIPITIRQLEAIIRITESLAKLELSPIAQERHV 677
Query: 81 NMAIRMMLESFVDTQKYSVMKQMKQTFQKYLS 112
+ AIR+ S +D + + Q LS
Sbjct: 678 DEAIRLFQASTMDAASQDPIGGLNQASGTSLS 709
>sp|I0IUP4|MCM9_CHICK DNA helicase MCM9 OS=Gallus gallus GN=MCM9 PE=1 SV=2
Length = 1169
Score = 40.8 bits (94), Expect = 0.006, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 28 ESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
ES + +Y M++ + TIR +ES+IR+A+AHA++ R+ V+ +D + +M
Sbjct: 543 ESNLILVRYYQMQRQSDCRNAARTTIRLLESLIRLAEAHARLMFRDTVTLEDAVTVVSVM 602
Query: 88 LESFVDTQKYSVMKQMKQTF-QKYLSFKKDTTELLYYILRQMTLDQLIHIPFVSQTFQKY 146
S + + +F + ++ + EL IL ++ L L+H + Q+
Sbjct: 603 ESSMQGGALLGAINALHTSFPENPMTQYRMQCEL---ILERLELHDLLH-----KELQRL 654
Query: 147 LSFKKDT 153
+K+T
Sbjct: 655 DRLQKET 661
>sp|Q2KHI9|MCM9_MOUSE DNA helicase MCM9 OS=Mus musculus GN=Mcm9 PE=1 SV=2
Length = 1134
Score = 40.4 bits (93), Expect = 0.007, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 35 KYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLES 90
+Y M++ + TIR +ES+IR+A+AHA++ R V+ +D A+ +M S
Sbjct: 548 RYYQMQRQSDSRNAARTTIRLLESLIRLAEAHARLMFRSAVTLEDAVTAVSVMESS 603
>sp|Q9VGW6|MCM5_DROME DNA replication licensing factor Mcm5 OS=Drosophila melanogaster
GN=Mcm5 PE=1 SV=1
Length = 733
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 34/47 (72%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
S+PIT+R +E++IR++++ AK+ L+ +++ VN A+R+ S +D
Sbjct: 604 SIPITVRQLEAVIRISESLAKIRLQPFATDEHVNEALRLFQVSTLDA 650
>sp|Q7Q0Q1|MCM6_ANOGA DNA replication licensing factor Mcm6 OS=Anopheles gambiae GN=Mcm6
PE=3 SV=3
Length = 814
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 51 ITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSV 99
IT+R +ESMIR+++A AKM E V+E V A R++ +S + ++ +
Sbjct: 609 ITVRQLESMIRLSEAMAKMECSEEVTERHVKEAYRLLNKSIIRVEQPDI 657
>sp|Q58371|Y961_METJA Uncharacterized MCM-type protein MJ0961 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0961 PE=3 SV=1
Length = 762
Score = 40.4 bits (93), Expect = 0.008, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 36 YSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMM 87
Y M+++ + +PIT R +E++IR+A+ HAK L + V + D +AI ++
Sbjct: 617 YLEMRKLGEGDNPIPITARQLEAIIRIAEMHAKARLSDKVEDVDAEVAISII 668
>sp|Q9UXG1|MCM_SULSO Minichromosome maintenance protein MCM OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=MCM
PE=1 SV=1
Length = 686
Score = 40.0 bits (92), Expect = 0.009, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 9 HLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAK 68
+ R++V+ + A ++ + FV+ +K K + + IT R +E++IR+++A+AK
Sbjct: 519 YARKYVTPKITSEAKNLITDFFVEMRK----KSSETPDSPILITPRQLEALIRISEAYAK 574
Query: 69 MHLREHVSEDDVNMAI---RMMLES 90
M L+ V+ +D AI R+ LES
Sbjct: 575 MALKAEVTREDAERAINIMRLFLES 599
>sp|P33991|MCM4_HUMAN DNA replication licensing factor MCM4 OS=Homo sapiens GN=MCM4 PE=1
SV=5
Length = 863
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 12/91 (13%)
Query: 1 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMI 60
+A AH+ + R +SE+ A + ++E++VD M+++ G + R +ES+I
Sbjct: 691 IAYAHSTIMPR--LSEE----ASQALIEAYVD------MRKIGSSRGMVSAYPRQLESLI 738
Query: 61 RMAQAHAKMHLREHVSEDDVNMAIRMMLESF 91
R+A+AHAK+ L V DV A R+ E+
Sbjct: 739 RLAEAHAKVRLSNKVEAIDVEEAKRLHREAL 769
>sp|Q86B14|MCM6_DICDI DNA replication licensing factor mcm6 OS=Dictyostelium discoideum
GN=mcm6 PE=3 SV=1
Length = 867
Score = 39.7 bits (91), Expect = 0.013, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 36 YSVMKQMKQVTGSLP---ITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFV 92
Y ++QM P IT+R +ES++R++++ A++HL V VN A R++ +S V
Sbjct: 672 YDRLRQMDTSGSKTPAYRITVRQLESLVRLSESLARLHLDTKVLPKYVNEAARLLEKSIV 731
Query: 93 DTQKYSVM 100
+ V+
Sbjct: 732 HVETNDVI 739
>sp|Q21902|MCM5_CAEEL DNA replication licensing factor mcm-5 OS=Caenorhabditis elegans
GN=mcm-5 PE=3 SV=1
Length = 759
Score = 39.7 bits (91), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 2 AQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIR 61
A+ + L SE VN ++M V+ + K K ++PIT+R +E+++R
Sbjct: 586 ARLNCGPRLTPQASEKLVNHYVKMR-NPVVNADAFKSGK--KAHNSAIPITVRQLEAIVR 642
Query: 62 MAQAHAKMHLREHVSEDDVNMAIRMMLESFVDT 94
+A++ AKM L++ ++ V A+R+ S ++
Sbjct: 643 IAESIAKMELQQFATDKHVEEALRLFRVSTIEA 675
>sp|F6RIX4|MCM9_XENTR DNA helicase MCM9 OS=Xenopus tropicalis GN=mcm9 PE=3 SV=1
Length = 1117
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 20 NMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDD 79
N+ +M ++ V +Y +++ + TIR +ES+IR+A+AHA++ R+ V+ +D
Sbjct: 534 NLQPKMSQDANVILVRYYQLQRQSSCRNAARTTIRLLESLIRLAEAHARLMYRDVVTTED 593
Query: 80 VNMAIRMMLES 90
+ +M S
Sbjct: 594 AITVVSIMESS 604
>sp|Q6NRM6|MCM9_XENLA DNA helicase MCM9 OS=Xenopus laevis GN=mcm9 PE=1 SV=1
Length = 1143
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 20 NMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDD 79
N+ +M ++ V +Y +++ + TIR +ES+IR+A+AHA++ R+ V+ +D
Sbjct: 534 NLQPKMSQDANVILVRYYQLQRQSSCRNAARTTIRLLESLIRLAEAHARIMYRDVVTTED 593
Query: 80 VNMAIRMMLES 90
+ +M S
Sbjct: 594 AITVVSIMESS 604
>sp|Q9NXL9|MCM9_HUMAN DNA helicase MCM9 OS=Homo sapiens GN=MCM9 PE=1 SV=4
Length = 1143
Score = 39.3 bits (90), Expect = 0.016, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 35 KYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLES 90
+Y M++ + TIR +ES+IR+A+AHA++ R+ V+ +D + +M S
Sbjct: 548 RYYQMQRQSDCRNAARTTIRLLESLIRLAEAHARLMFRDTVTLEDAITVVSVMESS 603
>sp|F1N2W9|MCM9_BOVIN DNA helicase MCM9 OS=Bos taurus GN=MCM9 PE=3 SV=2
Length = 1139
Score = 39.3 bits (90), Expect = 0.017, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 35 KYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLES 90
+Y M++ + TIR +ES+IR+A+AHA++ R+ V+ +D + +M S
Sbjct: 547 RYYQMQRQSDSRNAARTTIRLLESLIRLAEAHARLMFRDTVTLEDAVTVVSVMESS 602
>sp|Q14566|MCM6_HUMAN DNA replication licensing factor MCM6 OS=Homo sapiens GN=MCM6 PE=1
SV=1
Length = 821
Score = 39.3 bits (90), Expect = 0.018, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQTF 107
S IT+R +ESMIR+++A A+MH + V V A R++ +S + + V ++
Sbjct: 613 SWRITVRQLESMIRLSEAMARMHCCDEVQPKHVKEAFRLLNKSIIRVETPDVNLDQEEEI 672
Query: 108 Q 108
Q
Sbjct: 673 Q 673
>sp|F1M5F3|MCM9_RAT DNA helicase MCM9 OS=Rattus norvegicus GN=Mcm9 PE=3 SV=2
Length = 1124
Score = 38.9 bits (89), Expect = 0.021, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 35 KYSVMKQMKQVTGSLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLES 90
+Y M++ + TIR +ES+IR+A+AHA++ R V+ +D + +M S
Sbjct: 548 RYYQMQRQSDSRNAARTTIRLLESLIRLAEAHARLMFRSTVTLEDAITVVSVMESS 603
>sp|Q5XK83|MCM4A_XENLA DNA replication licensing factor mcm4-A OS=Xenopus laevis GN=mcm4-a
PE=1 SV=1
Length = 858
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 4 AHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMA 63
A+A+ ++ + E+ A + ++E++VD M+++ G + R +ES+IR++
Sbjct: 687 AYARTYVNPRLGEE----ASQALIEAYVD------MRKIGSGRGMVSAYPRQLESLIRLS 736
Query: 64 QAHAKMHLREHVSEDDVNMAIRMMLESF 91
+AHAK+ V DV A R+ E+
Sbjct: 737 EAHAKVRFSSKVETIDVEEAKRLHREAL 764
>sp|Q498J7|MC6ZA_XENLA Zygotic DNA replication licensing factor mcm6-A OS=Xenopus laevis
GN=zmcm6-a PE=1 SV=1
Length = 823
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 40 KQMKQVTGS------LPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFV 92
K+++Q GS IT+R +ESMIR+++ A+MH + V V A R++ +S +
Sbjct: 600 KRLRQRDGSGVTKSAWRITVRQLESMIRLSEGMARMHCSDEVQPKHVKEAFRLLNKSII 658
>sp|Q2KIZ8|MCM6_BOVIN DNA replication licensing factor MCM6 OS=Bos taurus GN=MCM6 PE=2
SV=1
Length = 821
Score = 38.9 bits (89), Expect = 0.024, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 40 KQMKQVTGS------LPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLESFVD 93
K+++Q GS IT+R +ESMIR+++A A+MH + V V A R++ +S +
Sbjct: 599 KRLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCCDEVQPKHVKEAFRLLNKSIIR 658
Query: 94 TQ 95
+
Sbjct: 659 VE 660
>sp|P41389|MCM5_SCHPO DNA replication licensing factor mcm5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mcm5 PE=1 SV=2
Length = 720
Score = 38.5 bits (88), Expect = 0.026, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 48 SLPITIRHIESMIRMAQAHAKMHLREHVSEDDVNMAIRMMLES 90
++PIT+R +E++IR+ ++ AKM L SE AIR+ L S
Sbjct: 598 TIPITVRQLEAIIRITESLAKMSLSPIASEAHATEAIRLFLTS 640
>sp|Q6GL41|MCM4_XENTR DNA replication licensing factor mcm4 OS=Xenopus tropicalis GN=mcm4
PE=2 SV=1
Length = 863
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Query: 4 AHAKMHLREHVSEDDVNMAIRMMLESFVDTQKYSVMKQMKQVTGSLPITIRHIESMIRMA 63
A+A+ ++ + E+ A + ++E++VD M+++ G + R +ES+IR++
Sbjct: 692 AYARTYVNPRLGEE----ASQALIEAYVD------MRKIGSGRGMVSAYPRQLESLIRLS 741
Query: 64 QAHAKMHLREHVSEDDVNMAIRMMLESF 91
+AHAK+ V DV A R+ E+
Sbjct: 742 EAHAKVRFSSKVETIDVEEAKRLHREAL 769
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.133 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,873,542
Number of Sequences: 539616
Number of extensions: 2105446
Number of successful extensions: 9957
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 9832
Number of HSP's gapped (non-prelim): 154
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)