RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13406
(1043 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 193 bits (494), Expect = 6e-57
Identities = 66/179 (36%), Positives = 95/179 (53%)
Query: 159 TFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTN 218
+ G KP+ C C +SF++ +L H R H G +P++C C F++
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
K DL RH R H G KP+ C C K FS++ +L H + H G K Y C C K F++ L
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
H R H G KP+ C C +SF+++ L+ H R HT KP+ C C +SFS++ L +H
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVH 180
Score = 189 bits (482), Expect = 2e-55
Identities = 67/179 (37%), Positives = 97/179 (54%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
+ G K + C C K+F+ H R H G KP++C C +SF+ + +L H R
Sbjct: 11 AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70
Query: 200 IHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG 259
H G +P++C C F+ +++L H R H G KP+ C C K FS+ L H + H G
Sbjct: 71 THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130
Query: 260 SKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
K Y C C K F+R+D+L+ H R H G KP+ C C +SF+++ LN+H R HT K
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 179 bits (458), Expect = 5e-52
Identities = 70/178 (39%), Positives = 93/178 (52%), Gaps = 2/178 (1%)
Query: 187 SFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSR 246
S S+ + G +P+ C C F+ L H R H G KP+ C C K FS
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 247 KDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALL 306
K DL RH + H G K Y C C K F+++ +L H R H G KP+ C C +SF+Q A L
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 307 NIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKCLNI 362
H R HT KP+ C C +SFS++ NL+ H + G P+KC E KSF+ LN+
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179
Score = 174 bits (443), Expect = 4e-50
Identities = 70/197 (35%), Positives = 96/197 (48%), Gaps = 10/197 (5%)
Query: 724 FTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSIC 783
++ + G K + C C K F HL H R H+G E PY C C
Sbjct: 3 EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTG-------EKPYKCPEC 55
Query: 784 DRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCG 843
+ F+ K L+RH R H EKP K C C K+F + A + H + H G + + C CG
Sbjct: 56 GKSFSDKKDLTRHQRTHTGEKPYK---CPECGKSFSQRANLRAHQRTHTGEKPYACPECG 112
Query: 844 NRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFS 903
F Q ++L H + H G K ++C C F+ + +L+ H R H G KP+ C C K+FS
Sbjct: 113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFS 172
Query: 904 RKDDLNRHMRKHDGIKP 920
R+D LN H R H G K
Sbjct: 173 RRDALNVHQRTHTGKKT 189
Score = 162 bits (414), Expect = 4e-46
Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 68 RKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + C +C K+F HL H ++H+ K ++C +
Sbjct: 5 GSSSSVAQAALEP----------GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE 54
Query: 128 CRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSES 187
C F K++ RH + H G K + C C K+F+ + H R H G KP+ C C +S
Sbjct: 55 CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKS 114
Query: 188 FTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRK 247
F+Q ++L H R H G +P++C C F+ + +L+ H R H G KP+ C C K FSR+
Sbjct: 115 FSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRR 174
Query: 248 DDLNRHMKIHEGSK 261
D LN H + H G K
Sbjct: 175 DALNVHQRTHTGKK 188
Score = 146 bits (371), Expect = 2e-40
Identities = 61/180 (33%), Positives = 90/180 (50%), Gaps = 10/180 (5%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
K + C C K ++R + L H RTH GE + C +C K+F DK L RH
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQRTHT----------GEKPYKCPECGKSFSDKKDLTRHQ 69
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
++H+ K ++C +C F + H + H G K + C C K+F+ H R H
Sbjct: 70 RTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHT 129
Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
G KP++C C +SF++ NL+ H R H G +P++C C F+ + LN H R H G K
Sbjct: 130 GEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 113 bits (285), Expect = 7e-29
Identities = 43/125 (34%), Positives = 65/125 (52%)
Query: 817 TFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTN 876
+ + + G + + C CG F + +L H + H G K ++C C F++
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 877 KSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHL 936
K DL RH R H G KP+ C C K+FS++ +L H R H G KP+ C C ++FS+ HL
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 937 KKHMR 941
+ H R
Sbjct: 122 RAHQR 126
Score = 94.8 bits (237), Expect = 2e-22
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C ECGK F++ L+ H R HTG K ++C C K F + +L+ H R H+G E
Sbjct: 108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTG-------EK 160
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEKP 805
PY C C + F+ + L+ H R H +K
Sbjct: 161 PYKCPECGKSFSRRDALNVHQRTHTGKKT 189
Score = 78.3 bits (194), Expect = 1e-16
Identities = 26/70 (37%), Positives = 33/70 (47%)
Query: 872 MKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFS 931
+ S G KP+ C C K+FSR D L H R H G KP+ C C ++FS
Sbjct: 1 ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFS 60
Query: 932 RKDHLKKHMR 941
K L +H R
Sbjct: 61 DKKDLTRHQR 70
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 156 bits (398), Expect = 5e-44
Identities = 47/186 (25%), Positives = 70/186 (37%), Gaps = 12/186 (6%)
Query: 169 HMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN--VCYICFTNKSDLNR 224
K + CS C ++ + L HL H G +PF C C FT+ L R
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 225 HSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKR--YLCTM--CPKCFTRKDDL 278
HS H G K F C C F+ K ++ +H K Y+C C K F + + L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 279 NRHMRNHDGLKPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
H +H P+ C C + F+ + L H ++H C+ +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182
Query: 337 HLKLQH 342
H+ H
Sbjct: 183 HVAECH 188
Score = 135 bits (343), Expect = 1e-36
Identities = 48/220 (21%), Positives = 63/220 (28%), Gaps = 46/220 (20%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
+ CS C + W L HL H+ K F C++
Sbjct: 2 GEKALP----------VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG-- 49
Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS--VCSESFT 189
C K FT RH H G K F C C FT
Sbjct: 50 ------------------------CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFT 85
Query: 190 QRSNLNIHLRIHDG--IRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCS--MCAKC 243
++N+ H I + C+ C F + L H H P+ C C K
Sbjct: 86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKR 145
Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR 283
FS L RH K+H G C +H+
Sbjct: 146 FSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185
Score = 135 bits (342), Expect = 2e-36
Identities = 51/221 (23%), Positives = 70/221 (31%), Gaps = 46/221 (20%)
Query: 733 HVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS--ICDRKFT 788
+ K + C C + + L HL KH+G E P+ C C++ FT
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTG-------EKPFPCKEEGCEKGFT 55
Query: 789 IKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQ 848
L+RH H EK C+ C RF
Sbjct: 56 SLHHLTRHSLTHTGEKNFT---CDSDG--------------------------CDLRFTT 86
Query: 849 KSNLNIHMKIHEGIKAHQ--CNV--CMMKFTNKSDLNRHMRKHDGVKPFLCS--ICAKNF 902
K+N+ H IK C+ C F + L H H P+ C C K F
Sbjct: 87 KANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRF 146
Query: 903 SRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKC 943
S L RH + H G C+ KH+ +C
Sbjct: 147 SLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAEC 187
Score = 128 bits (325), Expect = 3e-34
Identities = 48/203 (23%), Positives = 71/203 (34%), Gaps = 40/203 (19%)
Query: 718 SECGKVFTRKTTLKRHVRIHTGIKEFQC--WICSKCFMEKSHLNRHLRKHSGVVDNMEAE 775
++CG + + L+ H+ HTG K F C C K F HL RH H+G E
Sbjct: 18 ADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTG-------E 70
Query: 776 APYACS--ICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
+ C CD +FT K + +H N K C
Sbjct: 71 KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI-CVYVCHFEN------------------ 111
Query: 834 VRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN--VCMMKFTNKSDLNRHMRKHDGVK 891
CG FK+ + L +H H ++C C +F+ S L RH + H G
Sbjct: 112 --------CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 163
Query: 892 PFLCSICAKNFSRKDDLNRHMRK 914
C+ +H+ +
Sbjct: 164 CKKDDSCSFVGKTWTLYLKHVAE 186
Score = 118 bits (297), Expect = 2e-30
Identities = 49/215 (22%), Positives = 74/215 (34%), Gaps = 47/215 (21%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
K++ C+ C Y + +L HL H GE F C + C K F HL
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLCKHT----------GEKPFPCKEEGCEKGFTSLHHL 60
Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM 170
RH +H+ K F C+ C FT K +H
Sbjct: 61 TRHSLTHTGEKNFTCDSDG--------------------------CDLRFTTKANMKKHF 94
Query: 171 RAHEGIK--PFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN--VCYICFTNKSDLNR 224
IK + C C ++F + + L +H H P++C C F+ S L R
Sbjct: 95 NRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK-IHE 258
H ++H G C+ +H+ H+
Sbjct: 155 HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189
Score = 93.8 bits (234), Expect = 5e-22
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 12/122 (9%)
Query: 253 HMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS--VCFESFTQKALLNI 308
+ KRY+C+ C + + L H+ H G KPF C C + FT L
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 309 HLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHG--VNPFKCDE----KSFNCSKCL 360
H HT K C C F+ K+N+ H H + + C K+F L
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122
Query: 361 NI 362
+
Sbjct: 123 KV 124
Score = 58.0 bits (141), Expect = 1e-09
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 715 FPCSE--CGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK 764
+ C C K F+ + LKRH ++H G + CS + +H+ +
Sbjct: 135 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 186
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 136 bits (344), Expect = 1e-37
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR---I 228
G +C C + F + L +H R H G +PF+C C C+ K +L H +
Sbjct: 1 GSSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM 60
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHM-RNHDG 287
+ + F CS+C + F R+ +L HM H G Y C+ C + F +K DL HM + H G
Sbjct: 61 NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120
Query: 288 LK 289
Sbjct: 121 PS 122
Score = 131 bits (331), Expect = 8e-36
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN---H 285
+G C C K F K L H + H G K + C C KC+ RK++L H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
+ F CSVC E+F ++ L +H+ HT P+ CS C++ F QK +L H
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 117 bits (296), Expect = 4e-31
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRK---H 887
G +C C +F K L +H + H G K +C C + K +L H + +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 888 DGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPP 947
+ F CS+C + F R+ +L HM H G P+ CS C++ F +K L+ HM K +
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH--- 118
Query: 948 TGE 950
+G
Sbjct: 119 SGP 121
Score = 111 bits (279), Expect = 7e-29
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 4/121 (3%)
Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA---H 173
S + C C F K H + H G K F C C K + K H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 174 EGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRH-SRIHNGI 232
+ F CSVC E+F +R L +H+ H G P++C+ C F K DL H ++H+G
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121
Query: 233 K 233
Sbjct: 122 S 122
Score = 107 bits (270), Expect = 1e-27
Identities = 42/153 (27%), Positives = 58/153 (37%), Gaps = 42/153 (27%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK---HSGVVDN 771
C C K F K LK H R HTG K F+C C KC+ K +L H + +
Sbjct: 8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS---- 63
Query: 772 MEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVH 831
E + CS+C F + +L H+ +H E P
Sbjct: 64 ---EQVFTCSVCQETFRRRMELRLHMVSHTGEMP-------------------------- 94
Query: 832 DGVRDHQCQVCGNRFKQKSNLNIHM-KIHEGIK 863
++C C +F QK +L HM K+H G
Sbjct: 95 -----YKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 101 bits (253), Expect = 3e-25
Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 36/156 (23%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRH 796
+G +C C K F+ K +L H RKH+G E P+ C C + + K L H
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTG-------EKPFECPKCGKCYFRKENLLEH 54
Query: 797 LRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHM 856
+ + E+ TC VCQ+TF +++ L +HM
Sbjct: 55 EARNCMNRSEQVFTCSVCQETF----------------------------RRRMELRLHM 86
Query: 857 KIHEGIKAHQCNVCMMKFTNKSDLNRHM-RKHDGVK 891
H G ++C+ C +F K DL HM + H G
Sbjct: 87 VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
Score = 83.3 bits (207), Expect = 4e-19
Identities = 37/127 (29%), Positives = 50/127 (39%), Gaps = 14/127 (11%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+C C K++ K L H R H GE F C +C K + K +L H
Sbjct: 6 SGVECPTCHKKFLSKYYLKVHNRKHT----------GEKPFECPKCGKCYFRKENLLEHE 55
Query: 115 KS---HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM- 170
+ +VF C C+ F + E HM H G + CS CS+ F K HM
Sbjct: 56 ARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115
Query: 171 RAHEGIK 177
+ H G
Sbjct: 116 KLHSGPS 122
Score = 57.5 bits (140), Expect = 5e-10
Identities = 32/165 (19%), Positives = 42/165 (25%), Gaps = 55/165 (33%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV 344
G C C + F K L +H R HT KP C C + + +K +L
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE----NLLEHEAR 57
Query: 345 NPFKCDEKSFNCSKCLNIVRIPVEIKVEVPFVCKACASEETKKDKPGAASLGNKRGKA-- 402
N E+ F C C +
Sbjct: 58 NCMNRSEQ---------------------VFTCSVC-------------------QETFR 77
Query: 403 -----AASQKKETGKGKAKTVYTCEMCEKTFKYKLPLVKHCKKQH 442
TG+ Y C C + F K L H K H
Sbjct: 78 RRMELRLHMVSHTGE---MP-YKCSSCSQQFMQKKDLQSHMIKLH 118
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 135 bits (341), Expect = 9e-37
Identities = 37/152 (24%), Positives = 51/152 (33%), Gaps = 13/152 (8%)
Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQ------- 208
+ + E C +F+ L H+ + P Q
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 209 --CNVCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYL 264
C F K L H R+H G KPF C C K F+R ++L H + H G K +
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 265 CTM--CPKCFTRKDDLNRHMRNHDGLKPFHCS 294
C C + F D +HM H K S
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 127 bits (321), Expect = 4e-34
Identities = 36/140 (25%), Positives = 52/140 (37%), Gaps = 13/140 (9%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQ---------CSVCSESFTQ 190
I + C +TF+ + H+ P Q C +SF
Sbjct: 15 SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74
Query: 191 RSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSR 246
+ L H+R+H G +PF C C F +L H R H G KPF C C + F+
Sbjct: 75 KYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFAN 134
Query: 247 KDDLNRHMKIHEGSKRYLCT 266
D +HM +H K +
Sbjct: 135 SSDRKKHMHVHTSDKSGPSS 154
Score = 121 bits (306), Expect = 4e-32
Identities = 34/152 (22%), Positives = 45/152 (29%), Gaps = 13/152 (8%)
Query: 212 CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY-------- 263
I C + FS +L H+ +
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 264 -LCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHA 320
C K F K L H+R H G KPF C C + F + L IH R HT KP
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 321 CSI--CTESFSQKSNLYIHLKLQHGVNPFKCD 350
C C F+ S+ H+ +
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 120 bits (303), Expect = 1e-31
Identities = 41/181 (22%), Positives = 56/181 (30%), Gaps = 33/181 (18%)
Query: 62 CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENK 121
+ + E + S C +TF L H+
Sbjct: 3 SGSSGQPIKQELSCKWIDE----------AQLSRPKKSCDRTFSTMHELVTHVTMEHVGG 52
Query: 122 VFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
+ + C K+F K K H+R H G KPF C
Sbjct: 53 PEQNNHVCY-------------------WEECPREGKSFKAKYKLVNHIRVHTGEKPFPC 93
Query: 182 SV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLC 237
C + F + NL IH R H G +PF+C C F N SD +H +H K
Sbjct: 94 PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Query: 238 S 238
S
Sbjct: 154 S 154
Score = 119 bits (300), Expect = 2e-31
Identities = 38/210 (18%), Positives = 50/210 (23%), Gaps = 61/210 (29%)
Query: 719 ECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPY 778
G I C + F L H+
Sbjct: 2 SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHV----------- 50
Query: 779 ACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQ 838
PE+ ++
Sbjct: 51 ------------------------GGPEQNNHVCYWEE---------------------- 64
Query: 839 CQVCGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCS 896
C G FK K L H+++H G K C C F +L H R H G KPF C
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE 124
Query: 897 I--CAKNFSRKDDLNRHMRKHDGIKPFLCS 924
C + F+ D +HM H K S
Sbjct: 125 FEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 112 bits (283), Expect = 4e-29
Identities = 36/141 (25%), Positives = 49/141 (34%), Gaps = 13/141 (9%)
Query: 814 CQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQ------- 866
+ + + + + + C F L H+ + Q
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 867 --CNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHDGIKPFL 922
C F K L H+R H G KPF C C K F+R ++L H R H G KPF
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 923 CSM--CAEAFSRKDHLKKHMR 941
C C F+ KKHM
Sbjct: 123 CEFEGCDRRFANSSDRKKHMH 143
Score = 105 bits (263), Expect = 2e-26
Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 18/139 (12%)
Query: 241 AKCFSRKDDLNRHMK---IHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFH----- 292
S + + + I E C + F+ +L H+ P
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC 60
Query: 293 ----CSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNP 346
C +SF K L H+R+HT KP C C + F++ NL IH + G P
Sbjct: 61 YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKP 120
Query: 347 FKCD----EKSFNCSKCLN 361
FKC+ ++ F S
Sbjct: 121 FKCEFEGCDRRFANSSDRK 139
Score = 101 bits (254), Expect = 4e-25
Identities = 41/193 (21%), Positives = 51/193 (26%), Gaps = 75/193 (38%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQ---------CWICSKCFMEKSHLNRHLRKH 765
P C + F+ L HV + Q C K F K L H+R H
Sbjct: 26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
Query: 766 SGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFK 825
+G EKP C
Sbjct: 86 TG--------------------------------------EKPFPCPFPG---------- 97
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRH 883
CG F + NL IH + H G K +C C +F N SD +H
Sbjct: 98 ----------------CGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141
Query: 884 MRKHDGVKPFLCS 896
M H K S
Sbjct: 142 MHVHTSDKSGPSS 154
Score = 88.1 bits (219), Expect = 2e-20
Identities = 32/103 (31%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 707 KKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRK 764
+ C GK F K L H+R+HTG K F C C K F +L H R
Sbjct: 55 QNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRT 114
Query: 765 HSGVVDNMEAEAPYACSI--CDRKFTIKGQLSRHLRAHENEKP 805
H+G E P+ C CDR+F +H+ H ++K
Sbjct: 115 HTG-------EKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKS 150
Score = 45.4 bits (108), Expect = 1e-05
Identities = 5/53 (9%), Positives = 8/53 (15%), Gaps = 4/53 (7%)
Query: 898 CAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGE 950
+ + C FS L H+
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTME----HVG 51
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 130 bits (328), Expect = 5e-35
Identities = 43/153 (28%), Positives = 66/153 (43%), Gaps = 15/153 (9%)
Query: 177 KPFQCSVCSESFTQRSNLNIHL---RIHDGIRPFQCNVCYI-----CFTNKSDLNRHSRI 228
+ CS+ F + L H+ IH + F C+ F + L H R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 229 HNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHM-R 283
H G KP C+ C K +SR ++L H++ H G K Y+C C K F+ D +H R
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 284 NHDGLKPFHCSV--CFESFTQKALLNIHLRIHT 314
H KP+ C + C + +T + L H++
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154
Score = 127 bits (322), Expect = 3e-34
Identities = 49/175 (28%), Positives = 73/175 (41%), Gaps = 33/175 (18%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKS---HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVF 151
C + F + L H+ S H E K F C
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG---------------------- 41
Query: 152 LCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQC 209
CS + F + HMR H G KP +C+ C +S+++ NL HLR H G +P+ C
Sbjct: 42 -CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC 100
Query: 210 N--VCYICFTNKSDLNRH-SRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEG 259
C F+N SD +H +R H+ KP++C + C K ++ L +H+K G
Sbjct: 101 EHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 125 bits (317), Expect = 1e-33
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 15/154 (9%)
Query: 149 KVFLCSVCSKTFTDKVKFNRHM---RAHEGIKPFQCSVC-----SESFTQRSNLNIHLRI 200
CS+ F + + H+ H K F C F + L +H+R
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 201 HDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLC--SMCAKCFSRKDDLNRHMK- 255
H G +P +C C ++ +L H R H G KP++C C+K FS D +H
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 256 IHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDG 287
H K Y+C + C K +T L +H++ G
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 118 bits (299), Expect = 3e-31
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 30/174 (17%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGV 834
E C ++F + QL H+ + K C
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG-------------------- 40
Query: 835 RDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKP 892
C FK + L +HM+ H G K H+C C ++ +L H+R H G KP
Sbjct: 41 ---GCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKP 97
Query: 893 FLC--SICAKNFSRKDDLNRHM-RKHDGIKPFLCSM--CAEAFSRKDHLKKHMR 941
++C C+K FS D +H R H KP++C + C + ++ L+KH++
Sbjct: 98 YMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151
Score = 111 bits (279), Expect = 2e-28
Identities = 44/216 (20%), Positives = 67/216 (31%), Gaps = 77/216 (35%)
Query: 715 FPCSECGKVFTRKTTLKRHV---RIHTGIKEFQC-----WICSKCFMEKSHLNRHLRKHS 766
C + F + L H+ IH KEF C + F + L H+R+H+
Sbjct: 4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63
Query: 767 GVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKR 826
G EKP C
Sbjct: 64 G--------------------------------------EKPHKCTFEG----------- 74
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN--VCMMKFTNKSDLNRHM 884
C + + NL H++ H G K + C C F+N SD +H
Sbjct: 75 ---------------CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ 119
Query: 885 -RKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHDG 917
R H KP++C + C K ++ L +H++ G
Sbjct: 120 NRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155
Score = 108 bits (273), Expect = 1e-27
Identities = 39/146 (26%), Positives = 60/146 (41%), Gaps = 17/146 (11%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMK---IHEGSKRYLCTMC-----PKCFTRKDDLNRHMRN 284
C++ F ++ L H+ IH K ++C + F + L HMR
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61
Query: 285 HDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHAC--SICTESFSQKSNLYIHLKL 340
H G KP C+ C +S+++ L HLR HT KP+ C C+++FS S+ H
Sbjct: 62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 341 QH-GVNPFKCDE----KSFNCSKCLN 361
H P+ C K + L
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLR 147
Score = 48.0 bits (115), Expect = 2e-06
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 43/127 (33%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
K KC C K Y+R L HLR+H GE + C C K F +
Sbjct: 66 KPHKCTFEGCRKSYSRLENLKTHLRSHT----------GEKPYMCEHEGCSKAFSNASDR 115
Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNR 168
+H + H K ++C + C+K +TD +
Sbjct: 116 AKH---------------------------QNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148
Query: 169 HMRAHEG 175
H++ G
Sbjct: 149 HVKTVHG 155
Score = 33.3 bits (77), Expect = 0.16
Identities = 4/24 (16%), Positives = 9/24 (37%)
Query: 919 KPFLCSMCAEAFSRKDHLKKHMRK 942
C++ F ++ L H+
Sbjct: 2 TDCRWDGCSQEFDSQEQLVHHINS 25
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 119 bits (300), Expect = 1e-31
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCY 213
C+K + H R H G KP+QC C F++ L H R H G++PFQC C
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 214 ICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIH 257
F+ L H+R H G KPF C C K F+R D+L RH +H
Sbjct: 74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 116 bits (293), Expect = 9e-31
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 837 HQC--QVCGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKP 892
C C R+ + S+L +H + H G K +QC+ C +F+ L RH R+H GVKP
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66
Query: 893 FLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSM--CAEAFSRKDHLKKHMR 941
F C C + FSR D L H R H G KPF C C + F+R D L +H
Sbjct: 67 FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117
Score = 115 bits (290), Expect = 2e-30
Identities = 45/115 (39%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 205 RPFQCN--VCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGS 260
RPF C C + S L HSR H G KP+ C C + FSR D L RH + H G
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIH 313
K + C C + F+R D L H R H G KPF C C + F + L H +H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 114 bits (289), Expect = 2e-30
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 233 KPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGL 288
+PF+C+ C K + + L H + H G K Y C C + F+R D L RH R H G+
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIH 337
KPF C C F++ L H R HT KP +C C + F++ L H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 106 bits (267), Expect = 3e-27
Identities = 41/116 (35%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 806 EKPQTCE--VCQKTFDKMAKFKRHLKVHDGVRDHQCQV--CGNRFKQKSNLNIHMKIHEG 861
++P C C K + K++ + H + H G + +QC C RF + L H + H G
Sbjct: 4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63
Query: 862 IKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKH 915
+K QC C KF+ L H R H G KPF C C K F+R D+L RH H
Sbjct: 64 VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 104 bits (263), Expect = 8e-27
Identities = 40/149 (26%), Positives = 54/149 (36%), Gaps = 40/149 (26%)
Query: 715 FPCSE--CGKVFTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHSGVVD 770
F C+ C K + + + L+ H R HTG K +QC C + F L RH R+H+G
Sbjct: 7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG--- 63
Query: 771 NMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKV 830
P+ C C RKF+ L H R H EKP C
Sbjct: 64 ----VKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFS---CRWPS--------------- 101
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIH 859
C +F + L H +H
Sbjct: 102 -----------CQKKFARSDELVRHHNMH 119
Score = 99 bits (250), Expect = 5e-25
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 6/115 (5%)
Query: 121 KVFRCEQ--CRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGI 176
+ F C C ++ H + H G K + C C + F+ + RH R H G+
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIH 229
KPFQC C F++ +L H R H G +PF C C F +L RH +H
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 85.6 bits (213), Expect = 6e-20
Identities = 39/153 (25%), Positives = 50/153 (32%), Gaps = 44/153 (28%)
Query: 55 KKFKCN--ICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHL 110
+ F C C KRY + + L H R H GE + C C + F L
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHT----------GEKPYQCDFKDCERRFSRSDQL 54
Query: 111 NRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHM 170
RH + H GVK F C C + F+ H
Sbjct: 55 ----------------------------KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT 86
Query: 171 RAHEGIKPFQCSV--CSESFTQRSNLNIHLRIH 201
R H G KPF C C + F + L H +H
Sbjct: 87 RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119
Score = 66.4 bits (163), Expect = 3e-13
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 289 KPFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGV 344
+PF C+ C + + + + L +H R HT KP+ C C FS+ L H + GV
Sbjct: 5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 345 NPFKCDE--KSFNCSKCLNI 362
PF+C + F+ S L
Sbjct: 65 KPFQCKTCQRKFSRSDHLKT 84
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 118 bits (297), Expect = 3e-31
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 149 KVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRP 206
+ C C+K F D +H+ H G + C+ C ++F + S L H +H G +P
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 207 FQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKR 262
FQC C F+ +L H RIH G +P++C C K F++ +L H+ H +K
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 263 Y 263
Sbjct: 123 N 123
Score = 115 bits (291), Expect = 2e-30
Identities = 37/149 (24%), Positives = 55/149 (36%), Gaps = 35/149 (23%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
+ C C++ F S + HL H G +
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-----------------------------GPRV 34
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFH 292
+C+ C K F L RH +H G K + CT C K F+ +L H+R H G +P+
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94
Query: 293 CSV--CFESFTQKALLNIHLRIHTNSKPH 319
C C + F Q L H+ H +K +
Sbjct: 95 CPFDGCNKKFAQSTNLKSHILTHAKAKNN 123
Score = 112 bits (283), Expect = 2e-29
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 7/122 (5%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
+ C C K F + +H+ H G + ++C C K F L RH H G KP
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 291 FHCSV--CFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNP 346
F C+ C + F+ L H+RIHT +P+ C C + F+Q +NL H+
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Query: 347 FK 348
+
Sbjct: 123 NQ 124
Score = 109 bits (274), Expect = 4e-28
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 839 CQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI- 897
+ C F+ S + H+ H G + H C C F S L RH H G KPF C+
Sbjct: 10 HKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFE 68
Query: 898 -CAKNFSRKDDLNRHMRKHDGIKPFLCSM--CAEAFSRKDHLKKHMR 941
C K FS +L H+R H G +P++C C + F++ +LK H+
Sbjct: 69 GCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115
Score = 107 bits (270), Expect = 1e-27
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 806 EKPQTC--EVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
+ C + C K F + ++HL H G R H C CG F + S L H +H G K
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 864 AHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHDGIK 919
QC C +F+ +L H+R H G +P++C C K F++ +L H+ H K
Sbjct: 62 PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121
Query: 920 PF 921
Sbjct: 122 NN 123
Score = 106 bits (268), Expect = 2e-27
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 119 ENKVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGI 176
E + C + C F +H+ H G +V +C+ C K F + K RH H G
Sbjct: 2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGI 232
KPFQC+ C + F+ NL H+RIH G RP+ C C F ++L H H
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120
Query: 233 KPF 235
K
Sbjct: 121 KNN 123
Score = 102 bits (258), Expect = 5e-26
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 95 FTCSQ--CPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFL 152
C C K F D + +HL +H +V C +C F + RH +H G K F
Sbjct: 6 IACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ 64
Query: 153 CSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQ 208
C+ C K F+ H+R H G +P+ C C++ F Q +NL H+ H + Q
Sbjct: 65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 97.6 bits (244), Expect = 4e-24
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 39/153 (25%)
Query: 716 PCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAE 775
P C K+F + +++H+ H G + C C K F+E S L RH H+G E
Sbjct: 9 PHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTG-------E 60
Query: 776 APYACSI--CDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
P+ C+ C ++F++ L H+R H ++P C
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV---CPFDG------------------ 99
Query: 834 VRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQ 866
C +F Q +NL H+ H K +Q
Sbjct: 100 --------CNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 89.9 bits (224), Expect = 2e-21
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHSGVVDNM 772
C+ECGK F + LKRH +HTG K FQC C K F +L H+R H+G
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG----- 89
Query: 773 EAEAPYACSI--CDRKFTIKGQLSRHLRAHENEKP 805
+ PY C C++KF L H+ H K
Sbjct: 90 --DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122
Score = 89.9 bits (224), Expect = 2e-21
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
+ C C K F + +H+ H G + C+ C ++F + + L H +HT KP
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 319 HACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDE----KSFNCSKCLNI 362
C+ C + FS NL H+++ G P+ C K F S L
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKS 112
Score = 81.0 bits (201), Expect = 3e-18
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 863 KAHQC--NVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKP 920
+ C C F + S + +H+ H G + +C+ C K F L RH H G KP
Sbjct: 4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKP 62
Query: 921 FLCSM--CAEAFSRKDHLKKHMR 941
F C+ C + FS +L+ H+R
Sbjct: 63 FQCTFEGCGKRFSLDFNLRTHVR 85
Score = 65.6 bits (161), Expect = 6e-13
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHS 766
G+ P + CGK F+ L+ HVRIHTG + + C C+K F + ++L H+ H+
Sbjct: 59 GEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118
Query: 767 GVVDNMEAEAPY 778
Sbjct: 119 K-------AKNN 123
Score = 42.9 bits (102), Expect = 5e-05
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQ 744
GD P P C K F + T LK H+ H K Q
Sbjct: 89 GDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 116 bits (292), Expect = 8e-31
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Query: 170 MRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
G K + C C +SFT +S + H+ +H G+RP+ C VC F K L H +IH
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLN 279
GIKP+ C++CAK F +D +RH + +K Y + T +
Sbjct: 61 TGIKPYECNICAKRFMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108
Score = 114 bits (287), Expect = 4e-30
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
S +G K + C C K F+ K +RHM +H G + Y C +C K F K L HM+ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNL 334
G+KP+ C++C + F + H + + +K + + ++ ++ S
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 110 bits (278), Expect = 6e-29
Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 142 MKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
G K++ C C K+FT K + +RHM H G++P+ C VC + F + +L H++IH
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 202 DGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
GI+P++CN+C F + H + + K + + + + +
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 106 bits (268), Expect = 1e-27
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
G + + C C FT+KS +RH +H G++P+ C +C K F K L HMKIH
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 259 GSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLN 307
G K Y C +C K F +D H K + + ++ T+ + +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 102 bits (258), Expect = 3e-26
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 829 KVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHD 888
G + + CQ CG F KS + HM +H G++ + C VC KF K L HM+ H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 889 GVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHL 936
G+KP+ C+ICAK F +D H K + + + +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGP 107
Score = 97.5 bits (244), Expect = 3e-24
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 254 MKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
G K Y C C K FT K +RHM H GL+P+ C VC + F K L H++IH
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 314 TNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKCLN 361
T KP+ C+IC + F + + H + ++ + ++ + +
Sbjct: 61 TGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 94.0 bits (235), Expect = 4e-23
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAH 865
+K C+ C K+F ++ RH+ +H G+R + C VCG +FK K +L HMKIH GIK +
Sbjct: 8 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPY 66
Query: 866 QCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLN 909
+CN+C +F + H K + + +N + +
Sbjct: 67 ECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 91.7 bits (229), Expect = 3e-22
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEA 774
+PC +CGK FT K+ RH+ +H G++ + C +C K F K HL H++ H+G
Sbjct: 11 YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG------- 62
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTF 818
PY C+IC ++F + H K + ++
Sbjct: 63 IKPYECNICAKRFMWRDSF--HRHVTSCTKSYE---AAKAEQNT 101
Score = 89.8 bits (224), Expect = 2e-21
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
S +K++ C+ C F K + +RHM +H G++ + C VC K F K HM+ H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLN 223
GIKP++C++C++ F R + H + + ++ T S +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 87.5 bits (218), Expect = 9e-21
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLS 794
+G K + C C K F KS +RH+ H G PY C +C +KF +K L
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLG-------LRPYGCGVCGKKFKMKHHLV 54
Query: 795 RHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLN 853
H++ H KP + C +C K F F H V + ++ + S +
Sbjct: 55 GHMKIHTGIKPYE---CNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 82.9 bits (206), Expect = 4e-19
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 856 MKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
G K + C C FT+KS +RHM H G++P+ C +C K F K L HM+ H
Sbjct: 2 SSGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60
Query: 916 DGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGE 950
GIKP+ C++CA+ F +D +H+ +
Sbjct: 61 TGIKPYECNICAKRFMWRDSFHRHVT------SCT 89
Score = 80.2 bits (199), Expect = 3e-18
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKV 150
G+ + C QC K+F K +RH+ H + + C C F +K HMKIH G+K
Sbjct: 7 GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Query: 151 FLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLN 195
+ C++C+K F + F H K ++ + ++ T+ S +
Sbjct: 66 YECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108
Score = 76.7 bits (190), Expect = 5e-17
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C CGK F K L H++IHTGIK ++C IC+K FM + H S
Sbjct: 40 CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSC-------TK 90
Query: 777 PYACSICDRKFTIKGQLS 794
Y + ++ T S
Sbjct: 91 SYEAAKAEQNTTEASGPS 108
Score = 47.1 bits (113), Expect = 1e-06
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+ + C +C K++ K+ L H++ H G + C+ C K F+ + +RH+
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMKIHT----------GIKPYECNICAKRFMWRDSFHRHV 85
Query: 115 KSHSENKVFRCEQC 128
S K + +
Sbjct: 86 --TSCTKSYEAAKA 97
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 115 bits (291), Expect = 1e-30
Identities = 29/104 (27%), Positives = 44/104 (42%)
Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
S + K F+C C + F++ +L H + H + Y C +C K F R+D L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
H H KPF C C + F Q L +H +H + +
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 115 bits (290), Expect = 1e-30
Identities = 31/100 (31%), Positives = 43/100 (43%)
Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS 226
+ + K F C C FT+ NL IH R H RP+ C++C+ F + L H
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65
Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
IH+ KPF C C K F + L H +H +
Sbjct: 66 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 112 bits (284), Expect = 9e-30
Identities = 29/103 (28%), Positives = 39/103 (37%)
Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
S + + F C C FT +L H R H +P+ C +C K F R+D L
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
H IH K + C C K F + L H H +
Sbjct: 63 DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 105 bits (264), Expect = 5e-27
Identities = 25/100 (25%), Positives = 40/100 (40%)
Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL 198
+ K F+C C + FT H R H +P+ C +C ++F ++ +L H
Sbjct: 6 SGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHR 65
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
IH +PF+C C F L H +H +
Sbjct: 66 YIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 99.8 bits (250), Expect = 3e-25
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 249 DLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNI 308
+ + K ++C C + FT+ +L H R H +P+ C +C ++F ++ L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
H IH+ KP C C + F Q L +H L +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
Score = 97.9 bits (245), Expect = 2e-24
Identities = 29/93 (31%), Positives = 37/93 (39%)
Query: 849 KSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDL 908
S + + K C C FT +L H R H +P+ C IC K F R+D L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 909 NRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
H H KPF C C + F + L H
Sbjct: 62 RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94
Score = 94.4 bits (236), Expect = 3e-23
Identities = 25/99 (25%), Positives = 37/99 (37%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR 885
++ C+ CG F + NL IH + H + + C++C F + L H
Sbjct: 7 GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66
Query: 886 KHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
H KPF C C K F + L H H +
Sbjct: 67 IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
Score = 93.7 bits (234), Expect = 6e-23
Identities = 32/142 (22%), Positives = 43/142 (30%), Gaps = 38/142 (26%)
Query: 727 KTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRK 786
+ KEF C C + F + +L H R H+ E PY C IC +
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTD-------ERPYTCDICHKA 54
Query: 787 FTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRF 846
F + L H H EKP +CQ CG F
Sbjct: 55 FRRQDHLRDHRYIHSKEKP-------------------------------FKCQECGKGF 83
Query: 847 KQKSNLNIHMKIHEGIKAHQCN 868
Q L +H +H +
Sbjct: 84 CQSRTLAVHKTLHMQTSSPTAA 105
Score = 92.5 bits (231), Expect = 2e-22
Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 7/91 (7%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEA 774
F C CG+ FT+ L H R HT + + C IC K F + HL H HS
Sbjct: 18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSK------- 70
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
E P+ C C + F L+ H H
Sbjct: 71 EKPFKCQECGKGFCQSRTLAVHKTLHMQTSS 101
Score = 85.9 bits (214), Expect = 3e-20
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 277 DLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
+ K F C C FT+ L IH R HT+ +P+ C IC ++F ++ +L
Sbjct: 4 GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63
Query: 337 HLKLQHGVNPFKCDE--KSFNCSKCLNI 362
H + PFKC E K F S+ L +
Sbjct: 64 HRYIHSKEKPFKCQECGKGFCQSRTLAV 91
Score = 85.6 bits (213), Expect = 3e-20
Identities = 26/142 (18%), Positives = 39/142 (27%), Gaps = 38/142 (26%)
Query: 755 KSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVC 814
S + + + C C R FT L H R H +E+P
Sbjct: 2 SSGSSGGRLPSKT-------KKEFICKFCGRHFTKSYNLLIHERTHTDERP--------- 45
Query: 815 QKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKF 874
+ C +C F+++ +L H IH K +C C F
Sbjct: 46 ----------------------YTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGF 83
Query: 875 TNKSDLNRHMRKHDGVKPFLCS 896
L H H +
Sbjct: 84 CQSRTLAVHKTLHMQTSSPTAA 105
Score = 84.8 bits (211), Expect = 7e-20
Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 38/139 (27%)
Query: 72 LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
+ + + F C C + F ++L
Sbjct: 5 SSGGRLPSK----------TKKEFICKFCGRHFTKSYNL--------------------- 33
Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQR 191
H + H + + C +C K F + H H KPF+C C + F Q
Sbjct: 34 -------LIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQS 86
Query: 192 SNLNIHLRIHDGIRPFQCN 210
L +H +H
Sbjct: 87 RTLAVHKTLHMQTSSPTAA 105
Score = 47.0 bits (113), Expect = 1e-06
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F + TL H +H
Sbjct: 76 CQECGKGFCQSRTLAVHKTLHMQTSSPTA 104
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 109 bits (276), Expect = 8e-29
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
P +C VC + F+++ L H+R H G++P++C C + S LN+H RIH+
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
+PF C +C L H++ H G
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 106 bits (267), Expect = 1e-27
Identities = 34/93 (36%), Positives = 44/93 (47%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGL 288
P C +C KCFSRKD L HM+ H G K Y C C LN+H+R H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+PF C +C + + L +HLR HT +
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 105 bits (265), Expect = 2e-27
Identities = 29/93 (31%), Positives = 42/93 (45%)
Query: 201 HDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
P +C VC CF+ K L H R H G+KP+ C C + LN+H++IH
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
+ + C +CP L H+R+H G
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 104 bits (261), Expect = 8e-27
Identities = 36/93 (38%), Positives = 44/93 (47%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGI 204
C VC K F+ K K HMR H G+KP++C C + S+LN HLRIH
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
RPF+C +C N S L H R H G
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 100 bits (251), Expect = 2e-25
Identities = 36/89 (40%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C CGK F+RK LK H+R HTG+K ++C C + S LN+HLR HS E
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD-------ER 63
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEKP 805
P+ C IC QL+ HLR+H +
Sbjct: 64 PFKCQICPYASRNSSQLTVHLRSHTGDSG 92
Score = 99.0 bits (248), Expect = 5e-25
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
S + C +C KCF+RKD L HMR H G+KP+ C C + + LN HLRIH++
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 317 KPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+P C IC + S L +HL+ G +
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 96.3 bits (241), Expect = 4e-24
Identities = 31/93 (33%), Positives = 43/93 (46%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGV 890
H+C+VCG F +K L HM+ H G+K ++C C + S LN+H+R H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
+PF C IC L H+R H G
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 90.2 bits (225), Expect = 7e-22
Identities = 30/83 (36%), Positives = 39/83 (46%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGI 918
H+C VC F+ K L HMR H GVKP+ C C + LN+H+R H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 919 KPFLCSMCAEAFSRKDHLKKHMR 941
+PF C +C A L H+R
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLR 85
Score = 88.6 bits (221), Expect = 3e-21
Identities = 30/94 (31%), Positives = 42/94 (44%)
Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
S + +CE C F K + HM+ H GVK + C C D N+H+R H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+PF+C +C + S L +HLR H G
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 87.9 bits (219), Expect = 4e-21
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAH 865
P CEVC K F + K K H++ H GV+ ++C+ C S+LN H++IH +
Sbjct: 6 SGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPF 65
Query: 866 QCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
+C +C N S L H+R H G
Sbjct: 66 KCQICPYASRNSSQLTVHLRSHTGDSGPSS 95
Score = 85.2 bits (212), Expect = 4e-20
Identities = 31/131 (23%), Positives = 45/131 (34%), Gaps = 38/131 (29%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRH 796
+C +C KCF K L H+R H+G PY C CD L++H
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTG-------VKPYKCKTCDYAAADSSSLNKH 55
Query: 797 LRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHM 856
LR H +E+P +CQ+C + S L +H+
Sbjct: 56 LRIHSDERP-------------------------------FKCQICPYASRNSSQLTVHL 84
Query: 857 KIHEGIKAHQC 867
+ H G
Sbjct: 85 RSHTGDSGPSS 95
Score = 77.5 bits (192), Expect = 2e-17
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV 344
P C VC + F++K L H+R HT KP+ C C + + S+L HL++
Sbjct: 3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62
Query: 345 NPFKCDE--KSFNCSKCLNI 362
PFKC + S L +
Sbjct: 63 RPFKCQICPYASRNSSQLTV 82
Score = 64.0 bits (157), Expect = 9e-13
Identities = 26/127 (20%), Positives = 42/127 (33%), Gaps = 38/127 (29%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
KC +C K ++RK++L H+R H G + C C D L
Sbjct: 7 GPHKCEVCGKCFSRKDKLKTHMRCHT----------GVKPYKCKTCDYAAADSSSL---- 52
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
N+H++IH + F C +C + + H+R+H
Sbjct: 53 ------------------------NKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT 88
Query: 175 GIKPFQC 181
G
Sbjct: 89 GDSGPSS 95
Score = 46.3 bits (111), Expect = 2e-06
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C C + L H+R HTG
Sbjct: 67 CQICPYASRNSSQLTVHLRSHTGDSGPSS 95
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 105 bits (265), Expect = 2e-27
Identities = 37/87 (42%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKP 234
+P+ C V C F+Q +L H+RIH G +PFQC +C F+ L H R H G KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSK 261
F C +C + F+R D+ RH KIH K
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLRQK 89
Score = 97.9 bits (245), Expect = 1e-24
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
+P+ C + C + FS+ L RH++IH G K + C +C + F+R D L H+R H G KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSK 317
F C +C F + H +IH K
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLRQK 89
Score = 96.4 bits (241), Expect = 4e-24
Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
RP+ C V C F+ L RH RIH G KPF C +C + FSR D L H++ H G K
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLK 289
+ C +C + F R D+ RH + H K
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLRQK 89
Score = 95.6 bits (239), Expect = 6e-24
Identities = 33/78 (42%), Positives = 43/78 (55%)
Query: 842 CGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKN 901
C RF Q +L H++IH G K QC +CM F+ L H+R H G KPF C IC +
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 902 FSRKDDLNRHMRKHDGIK 919
F+R D+ RH + H K
Sbjct: 72 FARSDERKRHTKIHLRQK 89
Score = 94.8 bits (237), Expect = 1e-23
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 7/89 (7%)
Query: 716 PCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAE 775
P C + F++ +L RH+RIHTG K FQC IC + F HL H+R H+G E
Sbjct: 8 PVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTG-------E 60
Query: 776 APYACSICDRKFTIKGQLSRHLRAHENEK 804
P+AC IC RKF + RH + H +K
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 94.1 bits (235), Expect = 2e-23
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 863 KAHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKP 920
+ + C V C +F+ L RH+R H G KPF C IC +NFSR D L H+R H G KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 921 FLCSMCAEAFSRKDHLKKHMR 941
F C +C F+R D K+H +
Sbjct: 63 FACDICGRKFARSDERKRHTK 83
Score = 93.7 bits (234), Expect = 4e-23
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYIC 215
C + F+ RH+R H G KPFQC +C +F++ +L H+R H G +PF C++C
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 216 FTNKSDLNRHSRIHNGIK 233
F + RH++IH K
Sbjct: 72 FARSDERKRHTKIHLRQK 89
Score = 87.1 bits (217), Expect = 7e-21
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
+ Y C + C + F++ L RH+R H G KPF C +C +F++ L H+R HT KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 319 HACSICTESFSQKSNLYIHLK 339
AC IC F++ H K
Sbjct: 63 FACDICGRKFARSDERKRHTK 83
Score = 82.5 bits (205), Expect = 3e-19
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Query: 121 KVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKP 178
+ + C E C F RH++IH G K F C +C + F+ H+R H G KP
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 179 FQCSVCSESFTQRSNLNIHLRIHDG 203
F C +C F + H +IH
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLR 87
Score = 81.0 bits (201), Expect = 1e-18
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 806 EKPQTCEV--CQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
E+P C V C + F + RH+++H G + QC++C F + +L H++ H G K
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 864 AHQCNVCMMKFTNKSDLNRHMRKHDGVK 891
C++C KF + RH + H K
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 74.8 bits (185), Expect = 1e-16
Identities = 31/125 (24%), Positives = 46/125 (36%), Gaps = 40/125 (32%)
Query: 741 KEFQCWI--CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLR 798
+ + C + C + F + L RH+R H+G + P+ C IC R F+ L+ H+R
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTG-------QKPFQCRICMRNFSRSDHLTTHIR 55
Query: 799 AHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKI 858
H EKP C +CG +F + H KI
Sbjct: 56 THTGEKP-------------------------------FACDICGRKFARSDERKRHTKI 84
Query: 859 HEGIK 863
H K
Sbjct: 85 HLRQK 89
Score = 72.9 bits (180), Expect = 6e-16
Identities = 20/53 (37%), Positives = 25/53 (47%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
F C C + F+R L H+R HTG K F C IC + F RH + H
Sbjct: 35 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87
Score = 72.9 bits (180), Expect = 6e-16
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
+P+ C V C F+Q L H+RIHT KP C IC +FS+ +L H++ G P
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKP 62
Query: 347 FKCDE--KSFNCSKCLN 361
F CD + F S
Sbjct: 63 FACDICGRKFARSDERK 79
Score = 67.9 bits (167), Expect = 4e-14
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 95 FTC--SQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFL 152
+ C C + F L RH++ H+ K F+C C +F H++ H G K F
Sbjct: 5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64
Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIK 177
C +C + F + RH + H K
Sbjct: 65 CDICGRKFARSDERKRHTKIHLRQK 89
Score = 63.6 bits (156), Expect = 1e-12
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNR 112
+ + C + C +R+++ LT H+R H G+ F C C + F HL
Sbjct: 3 RPYACPVESCDRRFSQSGSLTRHIRIHT----------GQKPFQCRICMRNFSRSDHLTT 52
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
H+++H+ K F C+ C F E RH KIH K
Sbjct: 53 HIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
Score = 45.9 bits (110), Expect = 2e-06
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKE 742
F C CG+ F R KRH +IH K+
Sbjct: 63 FACDICGRKFARSDERKRHTKIHLRQKD 90
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 105 bits (265), Expect = 2e-27
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
G C +C + F +LN H H G +P+ C VC + F K ++ H R H+G
Sbjct: 1 GSSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60
Query: 232 --IKPFLCSMCAKCFSRKDDLNRHMK-IHEGSK 261
KP++C C K FSR D LN H+K +H G
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 97.9 bits (245), Expect = 1e-24
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG- 287
+G C +C K F LNRH H G K Y C +C F RKD ++ H+R+HDG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 288 -LKPFHCSVCFESFTQKALLNIHL-RIHT 314
KP+ C C + F++ LN H+ ++H+
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90
Score = 92.6 bits (231), Expect = 1e-22
Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG- 203
G C +C K F D NRH +H G KP+ C VC F ++ ++ H+R HDG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 204 -IRPFQCNVCYICFTNKSDLNRHS-RIHNGIK 233
+P+ C C F+ LN H ++H+G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 92.2 bits (230), Expect = 1e-22
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDG- 917
G C +C F + LNRH H G KP+ C +C F RKD ++ H+R HDG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 918 -IKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGE 950
KP++C C + FSR DHL H+++ + +G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVH---SGP 92
Score = 92.2 bits (230), Expect = 1e-22
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT-- 314
GS C +C K F LNRH +H G KP+ C VC F +K ++ H+R H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 315 NSKPHACSICTESFSQKSNLYIHLKLQH 342
KP+ C C + FS+ +L H+K H
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 87.9 bits (219), Expect = 4e-21
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDG- 889
G C++CG F+ +LN H H G K + C VC ++F K ++ H+R HDG
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 890 -VKPFLCSICAKNFSRKDDLNRHMRK-HDGIK 919
KP++C C K FSR D LN H+++ H G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 87.5 bits (218), Expect = 6e-21
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEA 774
C CGK+F L RH H+G K + C +C F K ++ H+R H G
Sbjct: 8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG-----SV 62
Query: 775 EAPYACSICDRKFTIKGQLSRHL-RAHENEK 804
PY C C + F+ L+ H+ + H
Sbjct: 63 GKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 77.9 bits (193), Expect = 1e-17
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIH--EGIK 863
CE+C K F + RH H G + + C VCG RFK+K ++ H++ H K
Sbjct: 5 SSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 64
Query: 864 AHQCNVCMMKFTNKSDLNRHMRK-HDGVK 891
+ C C F+ LN H+++ H G
Sbjct: 65 PYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 76.8 bits (190), Expect = 4e-17
Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 41/131 (31%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRH 796
+G C IC K F + HLNRH HSG E PY+C +C +F K ++S H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-------EKPYSCPVCGLRFKRKDRMSYH 54
Query: 797 LRAH--ENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNI 854
+R+H KP + CQ CG F + +LN
Sbjct: 55 VRSHDGSVGKP-------------------------------YICQSCGKGFSRPDHLNG 83
Query: 855 HMK-IHEGIKA 864
H+K +H G +
Sbjct: 84 HIKQVHSGPSS 94
Score = 74.1 bits (183), Expect = 3e-16
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG- 343
G C +C + F LN H H+ KP++C +C F +K + H++ G
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 344 -VNPFKCDE--KSFNCSKCLNI 362
P+ C K F+ LN
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNG 83
Score = 62.5 bits (153), Expect = 3e-12
Identities = 27/150 (18%), Positives = 43/150 (28%), Gaps = 65/150 (43%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
C IC K + L H +H GE ++C C F K +
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHS----------GEKPYSCPVCGLRFKRKDRM---- 51
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
+ H++ HDG
Sbjct: 52 ------------------------SYHVRSHDG--------------------------S 61
Query: 175 GIKPFQCSVCSESFTQRSNLNIHL-RIHDG 203
KP+ C C + F++ +LN H+ ++H G
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91
Score = 36.7 bits (86), Expect = 0.004
Identities = 27/138 (19%), Positives = 35/138 (25%), Gaps = 58/138 (42%)
Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKCLNIVRIPVEIKVE 372
+ S AC IC + F +L H G EK
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSG-------EK-------------------- 34
Query: 373 VPFVCKACASEETKKDKPGAASLGNKRGKA-------AASQKKETG-KGKAKTVYTCEMC 424
P+ C C G + + G GK Y C+ C
Sbjct: 35 -PYSCPVC-------------------GLRFKRKDRMSYHVRSHDGSVGKP---YICQSC 71
Query: 425 EKTFKYKLPLVKHCKKQH 442
K F L H K+ H
Sbjct: 72 GKGFSRPDHLNGHIKQVH 89
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 104 bits (263), Expect = 3e-27
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHD 916
C +T S L H+R H G KP+ C C F+R D+L RH RKH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 917 GIKPFLCSMCAEAFSRKDHLKKHMR 941
G +PF C C AFSR DHL HM+
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMK 86
Score = 101 bits (255), Expect = 5e-26
Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 26/113 (23%)
Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
+ C +++T+ S+L HLR H G +P+ C+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG------------------- 42
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
C F+R D+L RH + H G + + C C + F+R D L HM+ H
Sbjct: 43 -------CGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 91.1 bits (227), Expect = 2e-22
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHD 888
CG + + S+L H++ H G K + C+ C KF +L RH RKH
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 889 GVKPFLCSICAKNFSRKDDLNRHMRKH 915
G +PF C C + FSR D L HM++H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 89.9 bits (224), Expect = 6e-22
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHD 286
+ C K +++ L H++ H G K Y C C F R D+L RH R H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 287 GLKPFHCSVCFESFTQKALLNIHLRIH 313
G +PF C C +F++ L +H++ H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 89.1 bits (222), Expect = 1e-21
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC-WI-CSKCFMEKSHLNRHLRKHSGVVDNM 772
+ CGK +T+ + LK H+R HTG K + C W C F L RH RKH+G
Sbjct: 8 CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG----- 62
Query: 773 EAEAPYACSICDRKFTIKGQLSRHLRAH 800
P+ C CDR F+ L+ H++ H
Sbjct: 63 --HRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 85.3 bits (212), Expect = 3e-20
Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHD 202
+ C KT+T H+R H G KP+ C C F + L H R H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 203 GIRPFQCNVCYICFTNKSDLNRHSRIH 229
G RPFQC C F+ L H + H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 83.0 bits (206), Expect = 2e-19
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHT 314
+ C K +T+ L H+R H G KP+HC C F + L H R HT
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 315 NSKPHACSICTESFSQKSNLYIHLK 339
+P C C +FS+ +L +H+K
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMK 86
Score = 78.0 bits (193), Expect = 9e-18
Identities = 34/125 (27%), Positives = 43/125 (34%), Gaps = 40/125 (32%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSI--CDRKFTIKGQLS 794
T C K + + SHL HLR H+G E PY C C KF +L+
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTG-------EKPYHCDWDGCGWKFARSDELT 54
Query: 795 RHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNI 854
RH R H +P QCQ C F + +L +
Sbjct: 55 RHYRKHTGHRP-------------------------------FQCQKCDRAFSRSDHLAL 83
Query: 855 HMKIH 859
HMK H
Sbjct: 84 HMKRH 88
Score = 71.8 bits (177), Expect = 2e-15
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHE 174
+ C + H++ H G K + C C F + RH R H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 175 GIKPFQCSVCSESFTQRSNLNIHLRIH 201
G +PFQC C +F++ +L +H++ H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 63.7 bits (156), Expect = 1e-12
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 886 KHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSM--CAEAFSRKDHLKKHMRK 942
K + C K +++ L H+R H G KP+ C C F+R D L +H RK
Sbjct: 1 KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59
Score = 56.0 bits (136), Expect = 5e-10
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 12/97 (12%)
Query: 51 KKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKW 108
+ C K Y + + L HLRTH GE + C C F
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHT----------GEKPYHCDWDGCGWKFARSD 51
Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
L RH + H+ ++ F+C++C F HMK H
Sbjct: 52 ELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 37.9 bits (89), Expect = 0.001
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD----EKSFNCSKCLNI-VRIPV 367
T + + C +++++ S+L HL+ G P+ CD F S L R
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 368 EIKVEVPFVCKAC 380
+ PF C+ C
Sbjct: 62 GHR---PFQCQKC 71
Score = 27.9 bits (63), Expect = 5.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F+C C++ F R L H+ H
Sbjct: 66 FQCQKCDRAFSRSDHLALHMKRH 88
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 105 bits (264), Expect = 4e-27
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 846 FKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFS 903
+IH C +T S L H+R H G KP+ C+ C F+
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 904 RKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
R D+L RH RKH G KPF C +C +FSR DHL HM+
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Score = 101 bits (255), Expect = 6e-26
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 159 TFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICF 216
+ R H P C++ +T+ S+L HLR H G +P++C C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 217 TNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
+L RH R H G KPF C +C + FSR D L HMK H+
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 100 bits (250), Expect = 2e-25
Identities = 35/101 (34%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 187 SFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCF 244
S RIH P C +T S L H R H G KP+ C+ C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 245 SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
+R D+L RH + H G+K + C +C + F+R D L HM+ H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 96.2 bits (240), Expect = 7e-24
Identities = 36/102 (35%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 216 FTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFT 273
+ RIH P C K +++ L H++ H G K Y CT C F
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 274 RKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTN 315
R D+L RH R H G KPF C VC SF++ L +H++ H N
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 92.7 bits (231), Expect = 1e-22
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 822 AKFKRHLKVHDGVRDHQCQV--CGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNK 877
+ R H C C + + S+L H++ H G K ++C C +F
Sbjct: 1 GSSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60
Query: 878 SDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
+L RH RKH G KPF C +C ++FSR D L HM++H
Sbjct: 61 DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 90.8 bits (226), Expect = 4e-22
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 702 KRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLN 759
G + C KV+T+ + LK H+R HTG K ++C C F L
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELT 64
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHEN 802
RH RKH+G P+ C +C+R F+ L+ H++ H+N
Sbjct: 65 RHYRKHTG-------AKPFQCGVCNRSFSRSDHLALHMKRHQN 100
Score = 85.4 bits (212), Expect = 4e-20
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFT 301
+IH C K +T+ L H+R H G KP+ C+ C F
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 302 QKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
+ L H R HT +KP C +C SFS+ +L +H+K
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK 96
Score = 83.1 bits (206), Expect = 3e-19
Identities = 37/139 (26%), Positives = 49/139 (35%), Gaps = 44/139 (31%)
Query: 724 FTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSI- 782
RIH C+K + + SHL HLR H+G E PY C+
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTG-------EKPYKCTWE 51
Query: 783 -CDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQV 841
CD +F +L+RH R H KP QC V
Sbjct: 52 GCDWRFARSDELTRHYRKHTGAKP-------------------------------FQCGV 80
Query: 842 CGNRFKQKSNLNIHMKIHE 860
C F + +L +HMK H+
Sbjct: 81 CNRSFSRSDHLALHMKRHQ 99
Score = 66.1 bits (162), Expect = 2e-13
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Query: 873 KFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSM--CAEAF 930
+ R H P C K +++ L H+R H G KP+ C+ C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 931 SRKDHLKKHMRK 942
+R D L +H RK
Sbjct: 58 ARSDELTRHYRK 69
Score = 62.3 bits (152), Expect = 4e-12
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 10/90 (11%)
Query: 272 FTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSI--CTESFS 329
R H P C + +T+ + L HLR HT KP+ C+ C F+
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58
Query: 330 QKSNLYIHLKLQHGVNPFKCDEKSFNCSKC 359
+ L H + G PF+C C++
Sbjct: 59 RSDELTRHYRKHTGAKPFQCGV----CNRS 84
Score = 54.6 bits (132), Expect = 2e-09
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 16/110 (14%)
Query: 67 ARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC- 125
R H C K + HL HL++H+ K ++C
Sbjct: 4 GSSGPDLEKRRIH--------------YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCT 49
Query: 126 -EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHE 174
E C + F E RH + H G K F C VC+++F+ HM+ H+
Sbjct: 50 WEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 54.6 bits (132), Expect = 3e-09
Identities = 28/104 (26%), Positives = 39/104 (37%), Gaps = 14/104 (13%)
Query: 46 ENSSGKKMVKKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCP 101
+ + + C+ C K Y + + L HLRTH GE + C+ C
Sbjct: 5 SSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT----------GEKPYKCTWEGCD 54
Query: 102 KTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
F L RH + H+ K F+C C F HMK H
Sbjct: 55 WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 38.0 bits (89), Expect = 0.002
Identities = 17/63 (26%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
Query: 299 SFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD----EKSF 354
S RIH P CT+ +++ S+L HL+ G P+KC + F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 355 NCS 357
S
Sbjct: 58 ARS 60
Score = 36.8 bits (86), Expect = 0.004
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTHE 80
K F+C +C + ++R + L H++ H+
Sbjct: 73 AKPFQCGVCNRSFSRSDHLALHMKRHQ 99
Score = 28.4 bits (64), Expect = 3.6
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F+C +C ++F R L H+ H
Sbjct: 76 FQCGVCNRSFSRSDHLALHMKRH 98
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 99.5 bits (249), Expect = 3e-25
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
+KPFQC +C +F++ +L H+R H G +PF C++C F + RH I I P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 236 LCSMCAKCFSRKDDL---NRHMKIHEGSK 261
L + S+ L +K G +
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 94.5 bits (236), Expect = 1e-23
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 862 IKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
+K QC +CM F+ L H+R H G KPF C IC + F+R D+ RH I P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 922 LCSMCAEAFSRKDHLKKHMR 941
L E S+ HL+ +
Sbjct: 60 LEDKVEELLSKNYHLENEVA 79
Score = 94.1 bits (235), Expect = 2e-23
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
+KPF C +C + FSR D L H++ H G K + C +C + F R D+ RH + P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 292 HCSVCFESFTQKALL---NIHLRIHTNSK 317
E ++ L L+ +
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 89.5 bits (223), Expect = 9e-22
Identities = 23/93 (24%), Positives = 31/93 (33%), Gaps = 11/93 (11%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEA 774
F C C + F+R L H+R HTG K F C IC + F RH
Sbjct: 4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-------- 55
Query: 775 EAPYACSICDRKFTIKGQLSRH---LRAHENEK 804
P + + L L+ E+
Sbjct: 56 ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 88.3 bits (220), Expect = 2e-21
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
K + C +C + F+R D L H+R H G KPF C +C F + H I P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60
Query: 321 CSICTESFSQKSNLYIHLKLQ 341
E S+ +L +
Sbjct: 61 EDKVEELLSKNYHLENEVARL 81
Score = 87.2 bits (217), Expect = 6e-21
Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
+K F C +C + F+ H+R H G KPF C +C F + H I I P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 208 QCNVCYICFTNKSDL---NRHSRIHNGIK 233
+ + L + G +
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 84.5 bits (210), Expect = 5e-20
Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 834 VRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
++ QC++C F + +L H++ H G K C++C KF + RH + P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPI 59
Query: 894 LCSICAKNFSRKDDL---NRHMRKHDGIK 919
L + S+ L ++K G +
Sbjct: 60 LEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 76.0 bits (188), Expect = 5e-17
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPF 347
+KPF C +C +F++ L H+R HT KP AC IC F++ H + + P
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHILPI 59
Query: 348 KCDE--KSFNCS 357
D+ + + +
Sbjct: 60 LEDKVEELLSKN 71
Score = 76.0 bits (188), Expect = 6e-17
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 740 IKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRA 799
+K FQC IC + F HL H+R H+G E P+AC IC RKF + RH
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHTG-------EKPFACDICGRKFARSDERKRHRDI 53
Query: 800 HENEKPEKPQTCEVCQKTFDKM---AKFKRHLKVHDG 833
P + ++ K LK G
Sbjct: 54 QH----ILPILEDKVEELLSKNYHLENEVARLKKLVG 86
Score = 75.6 bits (187), Expect = 7e-17
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 4/86 (4%)
Query: 121 KVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQ 180
K F+C C +F H++ H G K F C +C + F + RH I P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60
Query: 181 CSVCSESFTQRSNL---NIHLRIHDG 203
E ++ +L L+ G
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVG 86
Score = 69.4 bits (171), Expect = 1e-14
Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Query: 807 KPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQ 866
KP C +C + F + H++ H G + C +CG +F + H I I
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPIL 60
Query: 867 CNVCMMKFTNKSDL---NRHMRKHDGVK 891
+ + L ++K G +
Sbjct: 61 EDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 65.2 bits (160), Expect = 3e-13
Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 14/99 (14%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRH 113
+K F+C IC + ++R + LT H+RTH GE F C C + F RH
Sbjct: 1 MKPFQCRICMRNFSRSDHLTTHIRTHT----------GEKPFACDICGRKFARSDERKRH 50
Query: 114 LKSHSENKVFRCEQCRFDFYVK---REYNRHMKIHDGVK 149
++ +K G +
Sbjct: 51 RDIQHI-LPILEDKVEELLSKNYHLENEVARLKKLVGER 88
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 94.8 bits (237), Expect = 1e-23
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
F C +C +SF + S L+ HL IH RP+ C C F KSD+ +H+ IH G KP C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 239 MCAKCFSRKDDLNRHMKIHEG 259
+C K FS+ +L H + H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 87.9 bits (219), Expect = 3e-21
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVC 212
C +C K+F + H+ H +P+ C C + F Q+S++ H IH G +P +C VC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 213 YICFTNKSDLNRHSRIHNG 231
F+ S+L HSR H G
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 86.7 bits (216), Expect = 6e-21
Identities = 31/78 (39%), Positives = 43/78 (55%)
Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
C +C K F R L+ H+ IH ++ Y C C K F +K D+ +H H G KP C VC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 297 FESFTQKALLNIHLRIHT 314
++F+Q + L H R HT
Sbjct: 64 GKAFSQSSNLITHSRKHT 81
Score = 86.3 bits (215), Expect = 1e-20
Identities = 30/81 (37%), Positives = 43/81 (53%)
Query: 207 FQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
F C +C F S L+ H IH+ +P+ C C K F +K D+ +H IH G K + C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 267 MCPKCFTRKDDLNRHMRNHDG 287
+C K F++ +L H R H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 85.2 bits (212), Expect = 2e-20
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 838 QCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSI 897
C++CG FK+ S L+ H+ IH + + C C +F KSD+ +H H G KP C +
Sbjct: 3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62
Query: 898 CAKNFSRKDDLNRHMRKHDG 917
C K FS+ +L H RKH G
Sbjct: 63 CGKAFSQSSNLITHSRKHTG 82
Score = 85.2 bits (212), Expect = 3e-20
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C CGK F R +TL H+ IH+ + + C C K F +KS + +H H+G E
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTG-------EK 56
Query: 777 PYACSICDRKFTIKGQLSRHLRAH 800
P+ C +C + F+ L H R H
Sbjct: 57 PHKCQVCGKAFSQSSNLITHSRKH 80
Score = 83.6 bits (208), Expect = 9e-20
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ C +C K F R L+ H+ H +P+ C C + F QK+ + H IHT KPH C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 323 ICTESFSQKSNLYIH 337
+C ++FSQ SNL H
Sbjct: 62 VCGKAFSQSSNLITH 76
Score = 79.4 bits (197), Expect = 2e-18
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 864 AHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
+ C +C F S L+ H+ H +P+ C C K F +K D+ +H H G KP C
Sbjct: 1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60
Query: 924 SMCAEAFSRKDHLKKHMR 941
+C +AFS+ +L H R
Sbjct: 61 QVCGKAFSQSSNLITHSR 78
Score = 74.4 bits (184), Expect = 1e-16
Identities = 29/81 (35%), Positives = 39/81 (48%)
Query: 123 FRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
F C+ C F + H+ IH + + C C K F K +H H G KP +C
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 183 VCSESFTQRSNLNIHLRIHDG 203
VC ++F+Q SNL H R H G
Sbjct: 62 VCGKAFSQSSNLITHSRKHTG 82
Score = 73.2 bits (181), Expect = 4e-16
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 811 CEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVC 870
C++C K+F + + HL +H R + CQ CG RF QKS++ H IH G K H+C VC
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 871 MMKFTNKSDLNRHMRKHDG 889
F+ S+L H RKH G
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 71.3 bits (176), Expect = 2e-15
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDH 837
+ C IC + F LS HL H + +P C+ C K F + + K+H +H G + H
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYP---CQYCGKRFHQKSDMKKHTFIHTGEKPH 58
Query: 838 QCQVCGNRFKQKSNLNIHMKIHEG 861
+CQVCG F Q SNL H + H G
Sbjct: 59 KCQVCGKAFSQSSNLITHSRKHTG 82
Score = 71.3 bits (176), Expect = 2e-15
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
+PC CGK F +K+ +K+H IHTG K +C +C K F + S+L H RKH+G
Sbjct: 30 YPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 41.3 bits (98), Expect = 8e-05
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 10/63 (15%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+ + C C KR+ +K+ + H H GE C C K F +L H
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTFIHT----------GEKPHKCQVCGKAFSQSSNLITHS 77
Query: 115 KSH 117
+ H
Sbjct: 78 RKH 80
Score = 35.9 bits (84), Expect = 0.005
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 321 CSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKCL 360
C IC +SF + S L HL + P+ C K F+ +
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDM 45
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 93.7 bits (234), Expect = 3e-23
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 166 FNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG----IRPFQCNVCYICFTNKSD 221
R H G KP+ CS C ++F Q+ L++H + + F C+ C FT ++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 222 LNRHSRIHNGIKPFLCSMCAKCF 244
+ RH+ G
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 93.4 bits (233), Expect = 4e-23
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEG----SKRYLCTMCPKCFTRKDD 277
R H G KP+ CS C K F +K L+ H K + ++C+ C K FTR++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 278 LNRHMRNHDGLKPFHCSVCFESF 300
+ RH N G S
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 93.0 bits (232), Expect = 6e-23
Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 193 NLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG----IKPFLCSMCAKCFSRKD 248
+ R H G +P+ C+ C F K L+ H + ++ F+CS C K F+R++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 249 DLNRHMKIHEGSKRYLCTMCPKCF 272
+ RH G
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 85.7 bits (213), Expect = 2e-20
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Query: 851 NLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDG----VKPFLCSICAKNFSRKD 906
+ + H G K + C+ C F K L+ H +++ F+CS C K F+R++
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 907 DLNRHMRKHDGIKPFLCSMCAEAF 930
+ RH G +
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 82.2 bits (204), Expect = 3e-19
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 4/78 (5%)
Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG----IKPFQCSVCSESFTQRSNL 194
+ H G K + CS C KTF K + H + + F CS C ++FT+R+ +
Sbjct: 4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63
Query: 195 NIHLRIHDGIRPFQCNVC 212
H G +
Sbjct: 64 ARHADNCAGPDGVEGENS 81
Score = 80.6 bits (200), Expect = 1e-18
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT----NSKPHACSICTESFSQKSN 333
R H G KP+ CS C ++F QK LL++H + + CS C ++F++++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 334 LYIHLKLQHGVNPFKCDE--KSF 354
+ H G + + + S
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 78.3 bits (194), Expect = 7e-18
Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 6/90 (6%)
Query: 729 TLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFT 788
+ R HTG K + C C K F +K L+ H +++ A + CS C + FT
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD---PNFVPAAFVCSKCGKTFT 58
Query: 789 IKGQLSRHLRAHENEKPEKPQTCEVCQKTF 818
+ ++RH + E +
Sbjct: 59 RRNTMARHADNCAGPDGVE---GENSGPSS 85
Score = 75.3 bits (186), Expect = 9e-17
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 880 LNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDG----IKPFLCSMCAEAFSRKDH 935
R H G KP+ CS C K F +K L+ H +++ F+CS C + F+R++
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 936 LKKHMRKCYGPPTGE 950
+ +H C G
Sbjct: 63 MARHADNC----AGP 73
Score = 75.3 bits (186), Expect = 1e-16
Identities = 16/77 (20%), Positives = 24/77 (31%), Gaps = 11/77 (14%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG----IKEFQCWICSKCFMEKSHLNRHLRKHSGVVD 770
+ CS C K F +K L H + + F C C K F ++ + RH +G
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAG--- 72
Query: 771 NMEAEAPYACSICDRKF 787
Sbjct: 73 ----PDGVEGENSGPSS 85
Score = 64.1 bits (157), Expect = 7e-13
Identities = 22/115 (19%), Positives = 32/115 (27%), Gaps = 36/115 (31%)
Query: 757 HLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP-EKPQTCEVCQ 815
R H+G E PYACS CD+ F K L H + + + C C
Sbjct: 2 SSGSSGRTHTG-------EKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCG 54
Query: 816 KTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVC 870
KT F +++ + H G +
Sbjct: 55 KT----------------------------FTRRNTMARHADNCAGPDGVEGENS 81
Score = 64.1 bits (157), Expect = 8e-13
Identities = 20/84 (23%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG----VKVFLCSVCSKTFTDKV 164
++H+ K + C C F K+ + H K + F+CS C KTFT +
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 165 KFNRHMRAHEGIKPFQCSVCSESF 188
RH G + S
Sbjct: 62 TMARHADNCAGPDGVEGENSGPSS 85
Score = 57.2 bits (139), Expect = 2e-10
Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
K + C+ C K + +K L H + + + + F CS+C KTF + + RH
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAA------FVCSKCGKTFTRRNTMARHA 67
Query: 115 KSHSENKVFRCEQC 128
+ + E
Sbjct: 68 DNCAGPDGVEGENS 81
Score = 48.7 bits (117), Expect = 2e-07
Identities = 24/130 (18%), Positives = 32/130 (24%), Gaps = 54/130 (41%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN----PFKCDE--KSFNCSKC 359
R HT KP+ACS C ++F QK L +H K H N F C + K+F
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 360 LNI-VRIPVEIKVEVPFVCKACASEETKKDKPGAASLGNKRGKAAASQKKETGKGKAKTV 418
+ CA
Sbjct: 63 MARHADN--------------CAGP-----DG---------------------------- 75
Query: 419 YTCEMCEKTF 428
E +
Sbjct: 76 VEGENSGPSS 85
Score = 27.9 bits (63), Expect = 5.0
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
+ C+ C+KTF +KQ LD H +
Sbjct: 16 YACSHCDKTFRQKQLLDMHFKRY 38
Score = 27.5 bits (62), Expect = 6.1
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
F C+ C KTF R+ T+ RH G
Sbjct: 48 FVCSKCGKTFTRRNTMARHADNC--AG 72
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 89.5 bits (223), Expect = 6e-22
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH--EGSKRYLCTMCPKCFTRKDDLN 279
R H+G KP+ C +C F++ + H+ E ++ C C RK DL
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 280 RHMRN-HDGLKPF 291
H+R H P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 87.6 bits (218), Expect = 3e-21
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 165 KFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG--IRPFQCNVCYICFTNKSDL 222
R H G KP++C +C FTQ + +H+ + F C C KSDL
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 223 NRHSR-IHNGIKPF 235
H R H+ P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 87.2 bits (217), Expect = 4e-21
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 6/78 (7%)
Query: 729 TLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFT 788
+ R H+G K ++C+IC F + + H+ + E A + C CD
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHT-----ENVAKFHCPHCDTVIA 56
Query: 789 IKGQLSRHLR-AHENEKP 805
K L HLR H P
Sbjct: 57 RKSDLGVHLRKQHSYSGP 74
Score = 86.4 bits (215), Expect = 9e-21
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHT--NSKPHACSICTESFSQKSNLY 335
R H G KP+ C +C FTQ + +H+ N C C ++KS+L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 336 IHLKLQH 342
+HL+ QH
Sbjct: 63 VHLRKQH 69
Score = 86.0 bits (214), Expect = 1e-20
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 880 LNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDG--IKPFLCSMCAEAFSRKDHLK 937
R H G KP+ C IC F++ + H+ + + F C C +RK L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 938 KHMRKCYGPPTGE 950
H+RK + +
Sbjct: 63 VHLRKQH---SYS 72
Score = 79.9 bits (198), Expect = 2e-18
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH--EGIKPFQCSVCSESFTQRSNLNI 196
+ H G K + C +C FT H+ E + F C C ++S+L +
Sbjct: 4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63
Query: 197 HLR-IHDGIRPF 207
HLR H P
Sbjct: 64 HLRKQHSYSGPS 75
Score = 77.2 bits (191), Expect = 1e-17
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 823 KFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIH--EGIKAHQCNVCMMKFTNKSDL 880
+ H G + ++C +C RF Q + +H+ E + C C KSDL
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 881 NRHMRK-HDGVKPF 893
H+RK H P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 74.9 bits (185), Expect = 9e-17
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 10/68 (14%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG--IKEFQCWICSKCFMEKSHLNRHLRK-HSGVVDN 771
+ C C FT+ T+K H+ + +F C C KS L HLRK HS
Sbjct: 16 YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY---- 71
Query: 772 MEAEAPYA 779
P +
Sbjct: 72 ---SGPSS 76
Score = 62.5 bits (153), Expect = 2e-12
Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN--PFKCDE--KSFNCSKCLN 361
R H+ KP+ C IC F+Q + +H+ +H N F C L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 362 I 362
+
Sbjct: 63 V 63
Score = 51.4 bits (124), Expect = 2e-08
Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 12/65 (18%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGS--FTCSQCPKTFVDKWHLNR 112
K ++C IC R+ + + H+ E F C C K L
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKH----------TENVAKFHCPHCDTVIARKSDLGV 63
Query: 113 HLKSH 117
HL+
Sbjct: 64 HLRKQ 68
Score = 34.8 bits (81), Expect = 0.011
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTHEAG 82
V KF C C ARK+ L HLR +
Sbjct: 43 VAKFHCPHCDTVIARKSDLGVHLRKQHSY 71
Score = 29.8 bits (68), Expect = 0.68
Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 1/24 (4%)
Query: 489 FKCALCEKTFVRKQTLDRHV-TVH 511
F C C+ RK L H+ H
Sbjct: 46 FHCPHCDTVIARKSDLGVHLRKQH 69
Score = 27.5 bits (62), Expect = 4.9
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
++C +C F + T+ H+
Sbjct: 16 YECYICHARFTQSGTMKMHILQK 38
Score = 27.1 bits (61), Expect = 6.9
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 413 GKAKTVYTCEMCEKTFKYKLPLVKHCKKQH 442
+ + C C+ K L H +KQH
Sbjct: 40 TENVAKFHCPHCDTVIARKSDLGVHLRKQH 69
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 87.0 bits (216), Expect = 5e-21
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 872 MKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEA 929
M+ ++L ++ +P+ C + C + FSR D+L RH+R H G KPF C +C
Sbjct: 1 MEPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58
Query: 930 FSRKDHLKKHMR 941
FSR DHL H+R
Sbjct: 59 FSRSDHLTTHIR 70
Score = 78.5 bits (194), Expect = 5e-18
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 223 NRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNR 280
N + + ++P+ C + C + FSR D+L RH++IH G K + C +C + F+R D L
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67
Query: 281 HMRNH 285
H+R H
Sbjct: 68 HIRTH 72
Score = 73.9 bits (182), Expect = 2e-16
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 845 RFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNF 902
+NL ++ + + C V C +F+ +L RH+R H G KPF C IC +NF
Sbjct: 2 EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59
Query: 903 SRKDDLNRHMRKH 915
SR D L H+R H
Sbjct: 60 SRSDHLTTHIRTH 72
Score = 72.7 bits (179), Expect = 5e-16
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 192 SNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDD 249
+NL ++ RP+ C V C F+ +L RH RIH G KPF C +C + FSR D
Sbjct: 7 NNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 250 LNRHMKIH 257
L H++ H
Sbjct: 65 LTTHIRTH 72
Score = 70.8 bits (174), Expect = 2e-15
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 701 RKRGKRKKGDTPQE--FPCS--ECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKS 756
P+ + C C + F+R L RH+RIHTG K FQC IC + F
Sbjct: 4 HPMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63
Query: 757 HLNRHLRKHS 766
HL H+R H+
Sbjct: 64 HLTTHIRTHT 73
Score = 69.6 bits (171), Expect = 7e-15
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 244 FSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFT 301
++L ++ + Y C + C + F+R D+L RH+R H G KPF C +C +F+
Sbjct: 3 PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 302 QKALLNIHLRIHT 314
+ L H+R HT
Sbjct: 61 RSDHLTTHIRTHT 73
Score = 61.9 bits (151), Expect = 3e-12
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 139 NRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNI 196
N + ++ + C V C + F+ + RH+R H G KPFQC +C +F++ +L
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67
Query: 197 HLRIH 201
H+R H
Sbjct: 68 HIRTH 72
Score = 61.6 bits (150), Expect = 3e-12
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 167 NRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNR 224
++ +P+ C V C F++ L H+RIH G +PFQC +C F+ L
Sbjct: 10 LNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67
Query: 225 HSRIH 229
H R H
Sbjct: 68 HIRTH 72
Score = 60.8 bits (148), Expect = 7e-12
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 724 FTRKTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
L +V ++ + C + C + F L RH+R H+G + P+ C
Sbjct: 3 PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTG-------QKPFQCR 53
Query: 782 ICDRKFTIKGQLSRHLRAH 800
IC R F+ L+ H+R H
Sbjct: 54 ICMRNFSRSDHLTTHIRTH 72
Score = 55.4 bits (134), Expect = 6e-10
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 756 SHLNRHLRKHSGVVDNMEAEAPYACSI--CDRKFTIKGQLSRHLRAHENEKPEKPQTCEV 813
++L ++ PYAC + CDR+F+ +L+RH+R H +KP + C +
Sbjct: 7 NNLLNYVVPK---------MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQ---CRI 54
Query: 814 CQKTFDKMAKFKRHLKVH 831
C + F + H++ H
Sbjct: 55 CMRNFSRSDHLTTHIRTH 72
Score = 55.4 bits (134), Expect = 7e-10
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 272 FTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSICTESFS 329
++L ++ +P+ C V C F++ L H+RIHT KP C IC +FS
Sbjct: 3 PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60
Query: 330 QKSNLYIHLK 339
+ +L H++
Sbjct: 61 RSDHLTTHIR 70
Score = 53.8 bits (130), Expect = 2e-09
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 794 SRHLRAHENEKPEKPQTC--EVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSN 851
+L + K +P C E C + F + + RH+++H G + QC++C F + +
Sbjct: 6 MNNLLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDH 64
Query: 852 LNIHMKIH 859
L H++ H
Sbjct: 65 LTTHIRTH 72
Score = 52.3 bits (126), Expect = 7e-09
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 827 HLKVHD--GVRDHQCQV--CGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNR 882
+L + +R + C V C RF + L H++IH G K QC +CM F+ L
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67
Query: 883 HMRKH 887
H+R H
Sbjct: 68 HIRTH 72
Score = 47.3 bits (113), Expect = 5e-07
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNR 112
+ + C + C +R++R + LT H+R H G+ F C C + F HL
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHT----------GQKPFQCRICMRNFSRSDHLTT 67
Query: 113 HLKSHS 118
H+++H+
Sbjct: 68 HIRTHT 73
Score = 45.8 bits (109), Expect = 1e-06
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 109 HLNRHLKSHSENKVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKF 166
+L ++ + + C E C F E RH++IH G K F C +C + F+
Sbjct: 8 NLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHL 65
Query: 167 NRHMRAH 173
H+R H
Sbjct: 66 TTHIRTH 72
Score = 40.8 bits (96), Expect = 9e-05
Identities = 11/43 (25%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 902 FSRKDDLNRHMRKHDGIKPFLCSM--CAEAFSRKDHLKKHMRK 942
++L ++ +P+ C + C FSR D L +H+R
Sbjct: 3 PHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRI 43
Score = 40.4 bits (95), Expect = 1e-04
Identities = 17/80 (21%), Positives = 28/80 (35%), Gaps = 14/80 (17%)
Query: 68 RKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS--QCPKTFVDKWHLNRHLKSHSENKVFRC 125
N L N++ + C C + F L RH++ H+ K F+C
Sbjct: 5 PMNNLLNYVVPKMR------------PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC 52
Query: 126 EQCRFDFYVKREYNRHMKIH 145
C +F H++ H
Sbjct: 53 RICMRNFSRSDHLTTHIRTH 72
Score = 36.1 bits (84), Expect = 0.005
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTH 79
K F+C IC + ++R + LT H+RTH
Sbjct: 47 QKPFQCRICMRNFSRSDHLTTHIRTH 72
Score = 35.0 bits (81), Expect = 0.011
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 307 NIHLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKC 359
N+ + +P+AC + C FS+ L H+++ G PF+C C +
Sbjct: 8 NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI----CMRN 58
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 85.3 bits (212), Expect = 2e-20
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 5/78 (6%)
Query: 172 AHEGIKPFQCSV--CSESFTQRSNLNIHLRI-HDGIRPFQCN--VCYICFTNKSDLNRHS 226
G C C F+ R LN H + H + F C C F K L H
Sbjct: 1 GSSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHM 60
Query: 227 RIHNGIKPFLCSMCAKCF 244
++H+ + ++C
Sbjct: 61 KLHSDTRDYICEFSGPSS 78
Score = 78.7 bits (195), Expect = 4e-18
Identities = 22/77 (28%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Query: 229 HNGIKPFLCSM--CAKCFSRKDDLNRHMKI-HEGSKRYLCT--MCPKCFTRKDDLNRHMR 283
+G C C + FS + LN H K H K + C C K F K L HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 284 NHDGLKPFHCSVCFESF 300
H + + C S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 77.6 bits (192), Expect = 1e-17
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 201 HDGIRPFQCNV--CYICFTNKSDLNRHSRI-HNGIKPFLCS--MCAKCFSRKDDLNRHMK 255
G C+ C F+N+ LN H + H K F C C K F+ K L HMK
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 256 IHEGSKRYLCTMCPKCF 272
+H ++ Y+C
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 74.9 bits (185), Expect = 9e-17
Identities = 21/82 (25%), Positives = 29/82 (35%), Gaps = 10/82 (12%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRI-HTGIKEFQC--WICSKCFMEKSHLNRHLRKH 765
G + CG++F+ + L H + H K F C C K F K HL H++ H
Sbjct: 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63
Query: 766 SGVVDNMEAEAPYACSICDRKF 787
S Y C
Sbjct: 64 SD-------TRDYICEFSGPSS 78
Score = 73.0 bits (180), Expect = 5e-16
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 257 HEGSKRYLCTM--CPKCFTRKDDLNRHMR-NHDGLKPFHCS--VCFESFTQKALLNIHLR 311
GS C C + F+ + LN H + H K F C C +SF K L H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 312 IHTNSKPHACSICTESF 328
+H++++ + C S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 71.4 bits (176), Expect = 2e-15
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 145 HDGVKVFLCSV--CSKTFTDKVKFNRHMR-AHEGIKPFQCS--VCSESFTQRSNLNIHLR 199
G C C + F+++ N H + H K F C C +SF + +L H++
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 200 IHDGIRPFQCNVC 212
+H R + C
Sbjct: 62 LHSDTRDYICEFS 74
Score = 69.5 bits (171), Expect = 6e-15
Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 859 HEGIKAHQCNV--CMMKFTNKSDLNRHMR-KHDGVKPFLCS--ICAKNFSRKDDLNRHMR 913
G C+ C F+N+ LN H + +H K F C C K+F+ K L HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 914 KHDGIKPFLCSMCAEAF 930
H + ++C +
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 66.0 bits (162), Expect = 1e-13
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 15/87 (17%)
Query: 737 HTGIKEFQCWI--CSKCFMEKSHLNRHLR-KHSGVVDNMEAEAPYACS--ICDRKFTIKG 791
+G C C + F + +LN H + +H + ++C C + F K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH-------QKSFSCPEPACGKSFNFKK 54
Query: 792 QLSRHLRAHENEKPEKPQTCEVCQKTF 818
L H++ H + + CE +
Sbjct: 55 HLKEHMKLHSDTRDYI---CEFSGPSS 78
Score = 63.7 bits (156), Expect = 8e-13
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 887 HDGVKPFLCSI--CAKNFSRKDDLNRHMR-KHDGIKPFLCS--MCAEAFSRKDHLKKHMR 941
G C C + FS + LN H + +H K F C C ++F+ K HLK+HM+
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Score = 62.6 bits (153), Expect = 2e-12
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 285 HDGLKPFHCSV--CFESFTQKALLNIHLRI-HTNSKPHACS--ICTESFSQKSNLYIHLK 339
G C C F+ + LN H + H + K +C C +SF+ K +L H+K
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 340 LQHGVNPFKCDE--KSF 354
L + C+ S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 55.6 bits (135), Expect = 6e-10
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 5/70 (7%)
Query: 806 EKPQTCEV--CQKTFDKMAKFKRHLKV-HDGVRDHQCQ--VCGNRFKQKSNLNIHMKIHE 860
C+ C + F H K H + C CG F K +L HMK+H
Sbjct: 5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHS 64
Query: 861 GIKAHQCNVC 870
+ + C
Sbjct: 65 DTRDYICEFS 74
Score = 54.5 bits (132), Expect = 1e-09
Identities = 21/101 (20%), Positives = 30/101 (29%), Gaps = 29/101 (28%)
Query: 91 GEGSFTCS--QCPKTFVDKWHLNRHLK-SHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
G C C + F ++ +LN H K H K F C +
Sbjct: 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPE-------------------- 43
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESF 188
C K+F K HM+ H + + C S
Sbjct: 44 ------PACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 50.6 bits (122), Expect = 3e-08
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 15/79 (18%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLR-THEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWH 109
C+ C + ++ + L +H + H + SF+C + C K+F K H
Sbjct: 6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHI----------HQKSFSCPEPACGKSFNFKKH 55
Query: 110 LNRHLKSHSENKVFRCEQC 128
L H+K HS+ + + CE
Sbjct: 56 LKEHMKLHSDTRDYICEFS 74
Score = 36.8 bits (86), Expect = 0.003
Identities = 10/52 (19%), Positives = 15/52 (28%), Gaps = 12/52 (23%)
Query: 55 KKFKCN--ICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTF 104
K F C C K + K L H++ H + C +
Sbjct: 37 KSFSCPEPACGKSFNFKKHLKEHMKLHS----------DTRDYICEFSGPSS 78
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 84.8 bits (211), Expect = 3e-20
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS 226
+ H KP++C C SF + NL H +H G +P++CN+C F ++L H+
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65
Query: 227 RIHNGIKPF 235
RIH+G KP+
Sbjct: 66 RIHSGEKPY 74
Score = 84.4 bits (210), Expect = 3e-20
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
+ + H + +P++C+ C F K +L H +H G KP+ C++C F+R +L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 252 RHMKIHEGSKRY 263
H +IH G K Y
Sbjct: 63 THTRIHSGEKPY 74
Score = 83.3 bits (207), Expect = 8e-20
Identities = 25/72 (34%), Positives = 34/72 (47%)
Query: 220 SDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLN 279
+ HS + + KP+ C C F K +L H +H G K Y C +C F R +L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 280 RHMRNHDGLKPF 291
H R H G KP+
Sbjct: 63 THTRIHSGEKPY 74
Score = 78.3 bits (194), Expect = 6e-18
Identities = 24/70 (34%), Positives = 33/70 (47%)
Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
+ H + K Y C C F K +L H H G KP+ C++C F + A L H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Query: 310 LRIHTNSKPH 319
RIH+ KP+
Sbjct: 65 TRIHSGEKPY 74
Score = 77.9 bits (193), Expect = 7e-18
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 850 SNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLN 909
+ + H + K ++C+ C F K +L H H G KP+ C+IC F+R +L
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 910 RHMRKHDGIKPF 921
H R H G KP+
Sbjct: 63 THTRIHSGEKPY 74
Score = 75.2 bits (186), Expect = 7e-17
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 730 LKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTI 789
H + K ++C C F K +L H H+G E PY C+IC +F
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTG-------EKPYRCNICGAQFNR 57
Query: 790 KGQLSRHLRAHENEKP 805
L H R H EKP
Sbjct: 58 PANLKTHTRIHSGEKP 73
Score = 74.0 bits (183), Expect = 2e-16
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 139 NRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL 198
+ H + K + C C +F K H H G KP++C++C F + +NL H
Sbjct: 6 HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65
Query: 199 RIHDGIRPF 207
RIH G +P+
Sbjct: 66 RIHSGEKPY 74
Score = 73.3 bits (181), Expect = 3e-16
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 878 SDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLK 937
+ H KP+ C C +F K +L H H G KP+ C++C F+R +LK
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 938 KHMR 941
H R
Sbjct: 63 THTR 66
Score = 72.1 bits (178), Expect = 7e-16
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
+ H KP+ C C SF K L H +HT KP+ C+IC F++ +NL H
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64
Score = 71.7 bits (177), Expect = 1e-15
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 7/62 (11%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C C F K L H +HTG K ++C IC F ++L H R HSG E
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG-------EK 72
Query: 777 PY 778
PY
Sbjct: 73 PY 74
Score = 66.7 bits (164), Expect = 5e-14
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR 885
H + + ++C C F+ K NL H +H G K ++CN+C +F ++L H R
Sbjct: 7 HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66
Query: 886 KHDGVKPF 893
H G KP+
Sbjct: 67 IHSGEKPY 74
Score = 62.1 bits (152), Expect = 2e-12
Identities = 26/108 (24%), Positives = 36/108 (33%), Gaps = 38/108 (35%)
Query: 756 SHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQ 815
H + H + PY C C F KG L+ H H EKP
Sbjct: 3 HHHHHHSHMTHS-------DKPYKCDRCQASFRYKGNLASHKTVHTGEKP---------- 45
Query: 816 KTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
++C +CG +F + +NL H +IH G K
Sbjct: 46 ---------------------YRCNICGAQFNRPANLKTHTRIHSGEK 72
Score = 57.1 bits (139), Expect = 1e-10
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKCLNI 362
+ H + + KP+ C C SF K NL H + G P++C+ FN L
Sbjct: 5 HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63
Score = 47.4 bits (114), Expect = 3e-07
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 10/78 (12%)
Query: 72 LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
+H + + C +C +F K +L H H+ K +RC C
Sbjct: 5 HHHHSHMTH----------SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ 54
Query: 132 FYVKREYNRHMKIHDGVK 149
F H +IH G K
Sbjct: 55 FNRPANLKTHTRIHSGEK 72
Score = 42.1 bits (100), Expect = 3e-05
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 10/63 (15%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
K +KC+ C + K L +H H GE + C+ C F +L H
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHT----------GEKPYRCNICGAQFNRPANLKTHT 65
Query: 115 KSH 117
+ H
Sbjct: 66 RIH 68
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 84.0 bits (209), Expect = 5e-20
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 190 QRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDD 249
+ R ++C+ C F++ SDL++H R H G KP+ C C K F ++
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 250 LNRHMKIHEGSKRY 263
L H ++H GS
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 82.1 bits (204), Expect = 3e-19
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR 227
R + ++C C +SF+ S+L+ H R H G +P++C+ C F +S L H R
Sbjct: 8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67
Query: 228 IHNGIKPF 235
+H G P
Sbjct: 68 VHTGSGPS 75
Score = 79.4 bits (197), Expect = 2e-18
Identities = 23/73 (31%), Positives = 30/73 (41%)
Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
R + + C C K FS DL++H + H G K Y C C K F ++ L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 279 NRHMRNHDGLKPF 291
H R H G P
Sbjct: 63 IGHHRVHTGSGPS 75
Score = 75.9 bits (188), Expect = 4e-17
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 249 DLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNI 308
R +RY C C K F+ DL++H R H G KP+ C C ++F Q++ L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 309 HLRIHTNSKPH 319
H R+HT S P
Sbjct: 65 HHRVHTGSGPS 75
Score = 73.6 bits (182), Expect = 3e-16
Identities = 22/74 (29%), Positives = 34/74 (45%)
Query: 848 QKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDD 907
+ + ++C+ C F++ SDL++H R H G KP+ C C K F ++
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 908 LNRHMRKHDGIKPF 921
L H R H G P
Sbjct: 62 LIGHHRVHTGSGPS 75
Score = 71.7 bits (177), Expect = 1e-15
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 877 KSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHL 936
R + + + C C K+FS DL++H R H G KP+ C C +AF ++ HL
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 937 KKHMR 941
H R
Sbjct: 63 IGHHR 67
Score = 70.9 bits (175), Expect = 2e-15
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 277 DLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYI 336
R + + C C +SF+ + L+ H R HT KP+ C C ++F Q+S+L
Sbjct: 5 SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64
Query: 337 HLKLQHGVNPFK 348
H ++ G P
Sbjct: 65 HHRVHTGSGPSS 76
Score = 70.5 bits (174), Expect = 3e-15
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
R + + C C K+F+ ++H R H G KP++C C ++F QRS+L H R
Sbjct: 8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67
Query: 200 IHDGIRPF 207
+H G P
Sbjct: 68 VHTGSGPS 75
Score = 69.4 bits (171), Expect = 7e-15
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C ECGK F+ + L +H R HTG K ++C C K F+++SHL H R H+G
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG-------SG 73
Query: 777 PY 778
P
Sbjct: 74 PS 75
Score = 69.4 bits (171), Expect = 8e-15
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 727 KTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRK 786
+ R + ++C C K F S L++H R H+G E PY C C +
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG-------EKPYKCDECGKA 55
Query: 787 FTIKGQLSRHLRAHENEKP 805
F + L H R H P
Sbjct: 56 FIQRSHLIGHHRVHTGSGP 74
Score = 64.0 bits (157), Expect = 6e-13
Identities = 22/68 (32%), Positives = 31/68 (45%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR 885
R R ++C CG F S+L+ H + H G K ++C+ C F +S L H R
Sbjct: 8 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67
Query: 886 KHDGVKPF 893
H G P
Sbjct: 68 VHTGSGPS 75
Score = 57.8 bits (141), Expect = 1e-10
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 790 KGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQK 849
G R + K C+ C K+F + +H + H G + ++C CG F Q+
Sbjct: 3 SGSSGRSEWQQRERRRYK---CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQR 59
Query: 850 SNLNIHMKIHEGIK 863
S+L H ++H G
Sbjct: 60 SHLIGHHRVHTGSG 73
Score = 57.1 bits (139), Expect = 2e-10
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
Query: 302 QKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKC 359
+ + C C +SFS S+L H + G P+KCDE K+F
Sbjct: 2 SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61
Query: 360 L 360
L
Sbjct: 62 L 62
Score = 41.3 bits (98), Expect = 6e-05
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+++KC+ C K ++ + L+ H RTH GE + C +C K F+ + HL H
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHT----------GEKPYKCDECGKAFIQRSHLIGHH 66
Query: 115 KSH 117
+ H
Sbjct: 67 RVH 69
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 81.7 bits (203), Expect = 3e-19
Identities = 23/68 (33%), Positives = 33/68 (48%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR 227
H G KP+ C C ++F++ S L H R+H G +P++C C F+ S L H R
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Query: 228 IHNGIKPF 235
IH
Sbjct: 64 IHTSGPSS 71
Score = 79.8 bits (198), Expect = 2e-18
Identities = 26/70 (37%), Positives = 34/70 (48%)
Query: 222 LNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRH 281
+ S IH+G KP+ C C K FSR L +H ++H G K Y C C K F++ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 282 MRNHDGLKPF 291
R H
Sbjct: 62 QRIHTSGPSS 71
Score = 78.7 bits (195), Expect = 3e-18
Identities = 27/71 (38%), Positives = 36/71 (50%)
Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
+ IH G K Y C C K F+R L +H R H G KP+ C C ++F+Q + L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 310 LRIHTNSKPHA 320
RIHT+
Sbjct: 62 QRIHTSGPSSG 72
Score = 78.7 bits (195), Expect = 4e-18
Identities = 24/70 (34%), Positives = 33/70 (47%)
Query: 194 LNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRH 253
+ IH G +P+ C C F+ S L +H R+H G KP+ C C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 254 MKIHEGSKRY 263
+IH
Sbjct: 62 QRIHTSGPSS 71
Score = 73.3 bits (181), Expect = 3e-16
Identities = 24/68 (35%), Positives = 32/68 (47%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
IH G K + C C K F+ +H R H G KP++C C ++F+Q S L H R
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Query: 200 IHDGIRPF 207
IH
Sbjct: 64 IHTSGPSS 71
Score = 72.1 bits (178), Expect = 7e-16
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEA 776
C ECGK F+R + L +H R+HTG K ++C C K F + S L H R H+
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS-------GP 69
Query: 777 PYA 779
Sbjct: 70 SSG 72
Score = 71.7 bits (177), Expect = 1e-15
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 730 LKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTI 789
IH+G K + C C K F S L +H R H+G E PY C C + F+
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTG-------EKPYKCLECGKAFSQ 54
Query: 790 KGQLSRHLRAHENEKP 805
L H R H +
Sbjct: 55 NSGLINHQRIHTSGPS 70
Score = 69.8 bits (172), Expect = 5e-15
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
+ H G KP+ C C ++F++ ++L H R+HT KP+ C C ++FSQ S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 338 LKLQHGVNPF 347
++
Sbjct: 62 QRIHTSGPSS 71
Score = 69.4 bits (171), Expect = 7e-15
Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 880 LNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKH 939
+ H G KP+ C C K FSR L +H R H G KP+ C C +AFS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 940 MR-----KCYG 945
R G
Sbjct: 62 QRIHTSGPSSG 72
Score = 68.3 bits (168), Expect = 2e-14
Identities = 24/70 (34%), Positives = 30/70 (42%)
Query: 852 LNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRH 911
+ IH G K + C C F+ S L +H R H G KP+ C C K FS+ L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 912 MRKHDGIKPF 921
R H
Sbjct: 62 QRIHTSGPSS 71
Score = 63.6 bits (156), Expect = 8e-13
Identities = 20/68 (29%), Positives = 29/68 (42%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR 885
+H G + + C CG F + S L H ++H G K ++C C F+ S L H R
Sbjct: 4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63
Query: 886 KHDGVKPF 893
H
Sbjct: 64 IHTSGPSS 71
Score = 59.8 bits (146), Expect = 2e-11
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 793 LSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNL 852
S H EKP C C K F + + +H +VH G + ++C CG F Q S L
Sbjct: 2 SSGSSGIHSGEKPYG---CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58
Query: 853 NIHMKIHEGIK 863
H +IH
Sbjct: 59 INHQRIHTSGP 69
Score = 54.4 bits (132), Expect = 1e-09
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE--KSFNCSKCL 360
+ IH+ KP+ C C ++FS+ S L H ++ G P+KC E K+F+ + L
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58
Score = 44.4 bits (106), Expect = 5e-06
Identities = 19/108 (17%), Positives = 27/108 (25%), Gaps = 38/108 (35%)
Query: 72 LTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFD 131
+ H GE + C +C K F L
Sbjct: 2 SSGSSGIHS----------GEKPYGCVECGKAFSRSSIL--------------------- 30
Query: 132 FYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
+H ++H G K + C C K F+ H R H
Sbjct: 31 -------VQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 42.1 bits (100), Expect = 3e-05
Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 10/67 (14%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
K + C C K ++R + L H R H GE + C +C K F L H
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHT----------GEKPYKCLECGKAFSQNSGLINHQ 62
Query: 115 KSHSENK 121
+ H+
Sbjct: 63 RIHTSGP 69
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 81.5 bits (202), Expect = 6e-19
Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 865 HQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCS--ICAKNFSRKDDLNRHMRKHDGIKP 920
+ C+ C F + L H H P+ C C K FS L RH + H G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 921 FLCSMCAEAFSRKDHLKKHMRKC 943
C+ KH+ +C
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAEC 84
Score = 79.6 bits (197), Expect = 3e-18
Identities = 18/70 (25%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Query: 216 FTNKSDLNRHSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFT 273
F + L H H P+ C C K FS L RH K+H G C
Sbjct: 13 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGK 72
Query: 274 RKDDLNRHMR 283
+H+
Sbjct: 73 TWTLYLKHVA 82
Score = 75.0 bits (185), Expect = 1e-16
Identities = 21/85 (24%), Positives = 28/85 (32%), Gaps = 9/85 (10%)
Query: 716 PCSECGKVFTRKTTLKRHVRIHTGIKEFQC--WICSKCFMEKSHLNRHLRKHSGVVDNME 773
CGK F + LK H HT ++C C K F S L RH + H+G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG------ 58
Query: 774 AEAPYACSICDRKFTIKGQLSRHLR 798
C +H+
Sbjct: 59 -YPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 70.0 bits (172), Expect = 6e-15
Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 150 VFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIR 205
+++C C K F + H +H P++C C + F+ S L H ++H G
Sbjct: 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60
Query: 206 PFQCNVCYICFTNKSDLNRH-SRIH 229
+ + C + +H + H
Sbjct: 61 CKKDDSCSFVGKTWTLYLKHVAECH 85
Score = 67.3 bits (165), Expect = 5e-14
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 7/79 (8%)
Query: 240 CAKCFSRKDDLNRHMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGL---KPFHCS 294
C K F + + L H H Y C C K F+ L RH + H G K CS
Sbjct: 9 CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68
Query: 295 VCFESFTQKALLNIHLRIH 313
+++T L H
Sbjct: 69 FVGKTWTL--YLKHVAECH 85
Score = 64.2 bits (157), Expect = 6e-13
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
Query: 263 YLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKP 318
Y+C C K F + + L H +H P+ C C + F+ + L H ++H
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 319 HACSICTESFSQKSNLYIHLKLQH 342
C+ + H+ H
Sbjct: 62 KKDDSCSFVGKTWTLYLKHVAECH 85
Score = 63.4 bits (155), Expect = 1e-12
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Query: 810 TCEVCQKTFDKMAKFKRHLKVHDGVRDHQC--QVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
E C K F K + K H H ++C + C RF S L H K+H G +
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 868 NVCMMKFTNKSDLNRHMRK 886
+ C + +H+ +
Sbjct: 65 DSCSFVGKTWTLYLKHVAE 83
Score = 60.7 bits (148), Expect = 1e-11
Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 715 FPCSE--CGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK 764
+ C C K F+ + LKRH ++H G + CS + +H+ +
Sbjct: 32 YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAE 83
Score = 54.2 bits (131), Expect = 2e-09
Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 291 FHCSV--CFESFTQKALLNIHLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHGVNP 346
+ C C ++F + L +H HT P+ C C + FS S L H K+ G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61
Query: 347 FKCDEKSFNCSKC 359
K D CS
Sbjct: 62 KKDDS----CSFV 70
Score = 50.7 bits (122), Expect = 3e-08
Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 14/91 (15%)
Query: 57 FKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHLNR 112
+ C+ C K + + N+L H +H + + C C K F L R
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHT----------QQLPYECPHEGCDKRFSLPSRLKR 51
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMK 143
H K H+ + + C F Y +H+
Sbjct: 52 HEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82
Score = 49.5 bits (119), Expect = 9e-08
Identities = 22/83 (26%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 96 TCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ--CRFDFYVKREYNRHMKIHDGVKVFLC 153
C K F L H SH++ + C C F + RH K+H G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 154 SVCS---KTFTDKVKFNRHMRAH 173
CS KT+T +K H
Sbjct: 65 DSCSFVGKTWTLYLK--HVAECH 85
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 80.6 bits (200), Expect = 7e-19
Identities = 23/68 (33%), Positives = 34/68 (50%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHN 230
+ P +CS CS S + ++ L IH RIH RPF+CN C S+L++H + +
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 231 GIKPFLCS 238
G S
Sbjct: 62 GDMSGPSS 69
Score = 76.8 bits (190), Expect = 1e-17
Identities = 17/68 (25%), Positives = 27/68 (39%)
Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHD 286
+ P CS C+ S K L H +IH + + C C + +L++HM+
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 287 GLKPFHCS 294
G S
Sbjct: 62 GDMSGPSS 69
Score = 76.8 bits (190), Expect = 2e-17
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
CSEC + K L+ H RIH + F+C CS + S+L++H++K G
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 75.6 bits (187), Expect = 4e-17
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHE 258
P +C+ C ++K+ L H RIH +PF C+ C+ + +L++HMK
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 259 GSKRY 263
G
Sbjct: 62 GDMSG 66
Score = 74.1 bits (183), Expect = 2e-16
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 885 RKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRK 942
P CS C+ + S K L H R H +PF C+ C+ + +L KHM+K
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59
Score = 72.9 bits (180), Expect = 3e-16
Identities = 15/66 (22%), Positives = 23/66 (34%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
C+ C + K L H R H +PF C+ C Q + L+ H++
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Query: 317 KPHACS 322
S
Sbjct: 64 MSGPSS 69
Score = 72.5 bits (179), Expect = 5e-16
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
CS CS + + K H R H +PF+C+ CS Q SNL+ H++ G
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Score = 71.8 bits (177), Expect = 8e-16
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
+ P CS C S + KA L IH RIH +P C+ C+ Q SNL H+K H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 343 GVNPFKCDEKSFNCS 357
G + S S
Sbjct: 62 G-------DMSGPSS 69
Score = 70.6 bits (174), Expect = 2e-15
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLS 794
+ +C CS K+ L H R H + P+ C+ C LS
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCT-------DRPFKCNYCSFDTKQPSNLS 54
Query: 795 RHLRAHENEKP 805
+H++ +
Sbjct: 55 KHMKKFHGDMS 65
Score = 70.2 bits (173), Expect = 3e-15
Identities = 17/66 (25%), Positives = 31/66 (46%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGI 918
+C+ C ++K+ L H R H +PF C+ C+ + + +L++HM+K G
Sbjct: 4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63
Query: 919 KPFLCS 924
S
Sbjct: 64 MSGPSS 69
Score = 69.1 bits (170), Expect = 8e-15
Identities = 18/67 (26%), Positives = 27/67 (40%)
Query: 830 VHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDG 889
+C C K+ L IH +IH + +CN C S+L++HM+K G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 890 VKPFLCS 896
S
Sbjct: 63 DMSGPSS 69
Score = 61.7 bits (151), Expect = 3e-12
Identities = 23/105 (21%), Positives = 28/105 (26%), Gaps = 38/105 (36%)
Query: 763 RKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMA 822
S P CS C + K L H R H ++P K
Sbjct: 2 SSGSS-------GHPEKCSECSYSCSSKAALRIHERIHCTDRPFK--------------- 39
Query: 823 KFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
C C KQ SNL+ HMK G +
Sbjct: 40 ----------------CNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 55.2 bits (134), Expect = 7e-10
Identities = 16/67 (23%), Positives = 25/67 (37%)
Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
S S +C +C + K H +IH + F C+ CS ++HM+ G
Sbjct: 3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62
Query: 176 IKPFQCS 182
S
Sbjct: 63 DMSGPSS 69
Score = 53.3 bits (129), Expect = 3e-09
Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 10/63 (15%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
KC+ C + K L H R H + F C+ C +L++H+
Sbjct: 8 HPEKCSECSYSCSSKAALRIHERIHC----------TDRPFKCNYCSFDTKQPSNLSKHM 57
Query: 115 KSH 117
K
Sbjct: 58 KKF 60
Score = 52.1 bits (126), Expect = 8e-09
Identities = 16/59 (27%), Positives = 24/59 (40%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
CS+C + K L H + H ++ F+C C FD ++HMK G
Sbjct: 6 SGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64
Score = 44.8 bits (107), Expect = 3e-06
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ C + + L +H++ G
Sbjct: 40 CNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68
Score = 29.4 bits (67), Expect = 0.83
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
FKC C + L +H+ G
Sbjct: 38 FKCNYCSFDTKQPSNLSKHMKKF--HG 62
Score = 27.1 bits (61), Expect = 5.1
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
KC+ C + K L H +H
Sbjct: 10 EKCSECSYSCSSKAALRIHERIH--CT 34
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 80.3 bits (199), Expect = 7e-19
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRI--HNGIKPFLCSMCAKCFSRKDDLNRHMKI 256
+G ++C VC +T+ S+ RH +K + C C K F+RKD++ H+KI
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 257 HEG 259
Sbjct: 63 IHK 65
Score = 80.3 bits (199), Expect = 8e-19
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRI--HDGIRPFQCNVCYICFTNKSDLNRHSRI 228
EG ++C VCS +T SN H ++ + C C+ FT K ++ H +I
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 229 HNGI 232
+ I
Sbjct: 63 IHKI 66
Score = 78.0 bits (193), Expect = 5e-18
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKI--HEGSKRYLCTMCPKCFTRKDDLNRHMRN 284
G + C +C++ ++ + RH K Y C C K FTRKD++ H++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 285 HDGL 288
+
Sbjct: 63 IHKI 66
Score = 76.4 bits (189), Expect = 2e-17
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 144 IHDGVKVFLCSVCSKTFTDKVKFNRHMR--AHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
+G + C VCS+ +T F RH +K + C C + FT++ N+ H++I
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 202 DGI 204
I
Sbjct: 64 HKI 66
Score = 76.1 bits (188), Expect = 3e-17
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 885 RKHDGVKPFLCSICAKNFSRKDDLNRHMR--KHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
+G + C +C++ ++ + RH +K + C C + F+RKD++ H++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61
Score = 74.9 bits (185), Expect = 6e-17
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 858 IHEGIKAHQCNVCMMKFTNKSDLNRHMR--KHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
EG ++C VC +T+ S+ RH VK + C C K F+RKD++ H++
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Query: 916 DGI 918
I
Sbjct: 64 HKI 66
Score = 72.6 bits (179), Expect = 4e-16
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 715 FPCSECGKVFTRKTTLKRHVRI--HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGV 768
+ C C +V+T + RH +K + C C K F K ++ H++ +
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66
Score = 70.7 bits (174), Expect = 2e-15
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRI--HTNSKPHACSICTESFSQKSNLYIHLKL 340
+G + C VC +T + H N K + C C + F++K N+ H+K+
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 341 QHGV 344
H +
Sbjct: 63 IHKI 66
Score = 68.0 bits (167), Expect = 2e-14
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLS 794
G ++C +CS+ + S+ RH Y C C ++FT K ++
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-----RNVKVYPCPFCFKEFTRKDNMT 57
Query: 795 RHLRAH 800
H++
Sbjct: 58 AHVKII 63
Score = 63.0 bits (154), Expect = 1e-12
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 798 RAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKV--HDGVRDHQCQVCGNRFKQKSNLNIH 855
E E + C+VC + + ++ F RH V+ + C C F +K N+ H
Sbjct: 3 FTKEGEHTYR---CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59
Query: 856 MKIHEGI 862
+KI I
Sbjct: 60 VKIIHKI 66
Score = 50.2 bits (121), Expect = 3e-08
Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 12/74 (16%)
Query: 77 RTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKS--HSENKVFRCEQCRFDFYV 134
T E GE ++ C C + + + RH + KV+ C C +F
Sbjct: 3 FTKE----------GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTR 52
Query: 135 KREYNRHMKIHDGV 148
K H+KI +
Sbjct: 53 KDNMTAHVKIIHKI 66
Score = 49.5 bits (119), Expect = 6e-08
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 8/63 (12%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
++C +C + Y + H T + C C K F K ++ H+
Sbjct: 9 HTYRCKVCSRVYTHISNFCRHYVTSHKR--------NVKVYPCPFCFKEFTRKDNMTAHV 60
Query: 115 KSH 117
K
Sbjct: 61 KII 63
Score = 35.6 bits (83), Expect = 0.006
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTH 79
VK + C C K + RK+ +T H++
Sbjct: 38 VKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 29.8 bits (68), Expect = 0.53
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
+ C C K F RK + HV +
Sbjct: 41 YPCPFCFKEFTRKDNMTAHVKII 63
Score = 28.3 bits (64), Expect = 2.2
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
++C +C + + RH
Sbjct: 11 YRCKVCSRVYTHISNFCRHYVTSHKRN 37
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 78.2 bits (193), Expect = 6e-18
Identities = 17/98 (17%), Positives = 25/98 (25%), Gaps = 25/98 (25%)
Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGI 232
G QC +C + Q+++LN H R H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETV-------------------------AA 36
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPK 270
F C C K F + D + H +
Sbjct: 37 LRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
Score = 75.5 bits (186), Expect = 5e-17
Identities = 19/72 (26%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKH---DGVKPFLCSICAKNFSRKDDLNRHMRKH 915
G QC +C K+ LN H RKH F C C K F + D + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 916 DGIKPFLCSMCA 927
+
Sbjct: 62 HPALLLAPQESS 73
Score = 75.5 bits (186), Expect = 6e-17
Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIH---EGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
+G C +C +K LN H + H + R+ C C K F + D + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 286 DGLKPFHCSVC 296
Sbjct: 62 HPALLLAPQES 72
Score = 74.7 bits (184), Expect = 1e-16
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRH 796
+G QC IC +K+ LN H RKH+ A + C C ++F ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHA----ETVAALRFPCEFCGKRFEKPDSVAAH 57
Query: 797 LRAHENEKPEKPQTC 811
PQ
Sbjct: 58 RSKSHPALLLAPQES 72
Score = 73.2 bits (180), Expect = 3e-16
Identities = 18/72 (25%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS---KPHACSICTESFSQKSNLYIHLKLQ 341
G C +C + QKA LN H R H + C C + F + ++ H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 342 HGVNPFKCDEKS 353
H E S
Sbjct: 62 HPALLLAPQESS 73
Score = 73.2 bits (180), Expect = 3e-16
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 3/59 (5%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKH---DGIKPFLCSMCAEAFSRKDHLKKHMRK 942
G C IC +K LN H RKH F C C + F + D + H K
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSK 60
Score = 71.7 bits (176), Expect = 1e-15
Identities = 16/66 (24%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHT---GIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDN 771
C CG +K +L H R H F C C K F + + H K +
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67
Query: 772 MEAEAP 777
E+
Sbjct: 68 APQESS 73
Score = 67.4 bits (165), Expect = 4e-14
Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 3/68 (4%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNH---DGLKPFHCSVCFESFTQKALLNIHLRIH 313
GS C +C +K LN H R H F C C + F + + H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 314 TNSKPHAC 321
+ A
Sbjct: 62 HPALLLAP 69
Score = 64.3 bits (157), Expect = 5e-13
Identities = 16/68 (23%), Positives = 19/68 (27%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGV 834
+ C IC K L+ H R H CE C K F+K H
Sbjct: 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64
Query: 835 RDHQCQVC 842
Q
Sbjct: 65 LLLAPQES 72
Score = 63.6 bits (155), Expect = 9e-13
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 3/68 (4%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVH---DGVRDHQCQVCGNRFKQKSNLNIHMKIHEGI 862
CE+C T + A H + H C+ CG RF++ ++ H
Sbjct: 5 SSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA 64
Query: 863 KAHQCNVC 870
Sbjct: 65 LLLAPQES 72
Score = 62.8 bits (153), Expect = 2e-12
Identities = 14/74 (18%), Positives = 20/74 (27%), Gaps = 7/74 (9%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+C IC +K L H R H F C C K F + H
Sbjct: 6 SGLQCEICGFTCRQKASLNWHQRKH-------AETVAALRFPCEFCGKRFEKPDSVAAHR 58
Query: 115 KSHSENKVFRCEQC 128
+ ++
Sbjct: 59 SKSHPALLLAPQES 72
Score = 57.8 bits (140), Expect = 1e-10
Identities = 16/72 (22%), Positives = 19/72 (26%), Gaps = 3/72 (4%)
Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIH---DGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
S + +CE C F K N H + H F C C K F H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 174 EGIKPFQCSVCS 185
S
Sbjct: 62 HPALLLAPQESS 73
Score = 32.4 bits (74), Expect = 0.086
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITGAE 517
+C +C T +K +L+ H H T A
Sbjct: 8 LQCEICGFTCRQKASLNWHQRKHAETVAA 36
Score = 32.4 bits (74), Expect = 0.095
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F C C K F + ++ H +
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKS 61
Score = 31.6 bits (72), Expect = 0.20
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 419 YTCEMCEKTFKYKLPLVKHCKKQH 442
+ CE C K F+ + H K H
Sbjct: 39 FPCEFCGKRFEKPDSVAAHRSKSH 62
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 74.1 bits (183), Expect = 1e-16
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK-HSG 767
F C C + F R+ LKRH R HT K + C +C++ F + L RH +K HSG
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 71.4 bits (176), Expect = 1e-15
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHM-KIHEG 259
R F C VC F + L RH R H KP+ C +C + F+R+D L RH KIH G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 70.2 bits (173), Expect = 2e-15
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHS-RIHNG 231
+ F C VC+ +F ++ +L H R H +P+ C +C FT + L RH+ +IH+G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 69.1 bits (170), Expect = 6e-15
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRK 942
+ F+C +C + F+R++ L RH R H KP+ C +C AF+R+D L +H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQK 52
Score = 67.9 bits (167), Expect = 2e-14
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHM-RNHDG 287
+ F+C +C + F+R++ L RH + H K Y C +C + FTR+D L RH + H G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 64.8 bits (159), Expect = 2e-13
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHL-RIHT 314
+ ++C +C + F R++ L RH R+H KP+ C +C +FT++ LL H +IH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55
Score = 64.0 bits (157), Expect = 4e-13
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH 342
+ F C VC +F ++ L H R HTN KP+ C +C +F+++ L H + H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 61.3 bits (150), Expect = 3e-12
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHL-RIHDG 203
+ F+C VC++ F + RH R+H KP+ C +C+ +FT+R L H +IH G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 60.6 bits (148), Expect = 7e-12
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 863 KAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRK-HDG 917
++ C VC F + L RH R H KP+ C +C + F+R+D L RH +K H G
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 55.2 bits (134), Expect = 4e-10
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 741 KEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHL-RA 799
+ F C +C++ F + HL RH R H+ E PY C +C+R FT + L RH +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN-------EKPYPCGLCNRAFTRRDLLIRHAQKI 53
Query: 800 HENEKPE 806
H E
Sbjct: 54 HSGNLGE 60
Score = 53.3 bits (129), Expect = 2e-09
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 837 HQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRK-HDG 889
C+VC F ++ +L H + H K + C +C FT + L RH +K H G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 49.0 bits (118), Expect = 8e-08
Identities = 22/86 (25%), Positives = 30/86 (34%), Gaps = 32/86 (37%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRD 836
+ C +C R F + L RH R+H NEKP
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEKP------------------------------- 30
Query: 837 HQCQVCGNRFKQKSNLNIHM-KIHEG 861
+ C +C F ++ L H KIH G
Sbjct: 31 YPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 43.6 bits (104), Expect = 5e-06
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 10/61 (16%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+ F C +C + +AR+ L H R+H E + C C + F + L RH
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHT----------NEKPYPCGLCNRAFTRRDLLIRHA 50
Query: 115 K 115
+
Sbjct: 51 Q 51
Score = 40.2 bits (95), Expect = 1e-04
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHM-KIHDG 147
F C C + F + HL RH +SH+ K + C C F + RH KIH G
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56
Score = 26.3 bits (59), Expect = 8.0
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
F C +C + F R++ L RH H T
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH--TN 27
Score = 26.3 bits (59), Expect = 9.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 489 FKCALCEKTFVRKQTLDRH 507
+ C LC + F R+ L RH
Sbjct: 31 YPCGLCNRAFTRRDLLIRH 49
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 75.2 bits (184), Expect = 2e-16
Identities = 22/100 (22%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Query: 848 QKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR-----KHDGVKPFLCSICAKNF 902
S+ ++ I G +C C + +L HM + D + + +
Sbjct: 3 SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62
Query: 903 SRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRK 942
RK L K D K C C +F L HM K
Sbjct: 63 PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIK 102
Score = 72.5 bits (177), Expect = 2e-15
Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 5/97 (5%)
Query: 220 SDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKI-----HEGSKRYLCTMCPKCFTR 274
S + I G F C C+ + +L HM + + R
Sbjct: 5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64
Query: 275 KDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLR 311
K L D K C C SF L++H+
Sbjct: 65 KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 72.5 bits (177), Expect = 2e-15
Identities = 19/92 (20%), Positives = 27/92 (29%), Gaps = 5/92 (5%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRI-----HDGIRPFQCNVCYICFTNKSDLN 223
+ G F+C CS ++ L +H+ D N K L
Sbjct: 10 YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK 255
+ K C C F DL+ HM
Sbjct: 70 EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 72.1 bits (176), Expect = 3e-15
Identities = 19/102 (18%), Positives = 31/102 (30%), Gaps = 5/102 (4%)
Query: 189 TQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRI-----HNGIKPFLCSMCAKC 243
+ S+ ++ I G F+C C + +L H + + +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 244 FSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
RK L + K C C F DL+ HM
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 70.9 bits (173), Expect = 8e-15
Identities = 21/96 (21%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 825 KRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKI-----HEGIKAHQCNVCMMKFTNKSD 879
K + + G +C+ C + L +HM + + N K
Sbjct: 8 KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRS 67
Query: 880 LNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
L K D K C C +F DL+ HM K
Sbjct: 68 LLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 69.4 bits (169), Expect = 2e-14
Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 6/108 (5%)
Query: 245 SRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR-----NHDGLKPFHCSVCFES 299
S + I G+ ++ C C + +L HM D + + + S
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 300 FTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL-KLQHGVNP 346
+K L K C C SF +L +H+ K +H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109
Score = 63.2 bits (153), Expect = 4e-12
Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 9/104 (8%)
Query: 756 SHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLR--AHENEKPEKPQTCEV 813
S + +G + + C C + +L+ H+ H + +
Sbjct: 5 SSGKLYGSIFTG-------ASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNP 57
Query: 814 CQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMK 857
+ + + D + +C CG+ F+ +L++HM
Sbjct: 58 KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 59.4 bits (143), Expect = 9e-11
Identities = 16/96 (16%), Positives = 29/96 (30%), Gaps = 5/96 (5%)
Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKI-----HDGVKVFLCSVCSKTFTDK 163
+ + FRC+ C + E HM D + + + K
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRK 65
Query: 164 VKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLR 199
+ K +C C SF +L++H+
Sbjct: 66 RSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 52.8 bits (126), Expect = 1e-08
Identities = 16/95 (16%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEA 774
F C +C + L H+ TG ++ R +A
Sbjct: 20 FRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE-DA 77
Query: 775 EAPYACSICDRKFTIKGQLSRHL--RAHENEKPEK 807
+ C C F LS H+ H +
Sbjct: 78 QKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 52.8 bits (126), Expect = 2e-08
Identities = 17/88 (19%), Positives = 24/88 (27%), Gaps = 5/88 (5%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKS--HSENKVFRCEQCRFDFY---VKREYNRHMKIH 145
G F C C + L H+ H + + + KR
Sbjct: 16 GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKE 75
Query: 146 DGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
D KV C C +F + HM
Sbjct: 76 DAQKVLKCMYCGHSFESLQDLSVHMIKT 103
Score = 49.0 bits (116), Expect = 3e-07
Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 5/89 (5%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
KF+C C Y LT H+ + + + + K L
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMNETG-----HYRDDNHETDNNNPKRWSKPRKRSLLEME 72
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMK 143
KV +C C F ++ + HM
Sbjct: 73 GKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 44.4 bits (104), Expect = 1e-05
Identities = 23/147 (15%), Positives = 40/147 (27%), Gaps = 40/147 (27%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKCLNIVRI 365
++ I T + C C+ ++ L +H+ + +
Sbjct: 7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG--------HYRDDNHET------ 52
Query: 366 PVEIKVEVPFVCKACASEETKKDKPGAASLGNKRGKAAASQKKETGKGKAKTVYTCEMCE 425
+ P S KR S + GK A+ V C C
Sbjct: 53 --------------------DNNNPKRWSKPRKR-----SLLEMEGKEDAQKVLKCMYCG 87
Query: 426 KTFKYKLPLVKH-CKKQHQVDLEMSES 451
+F+ L H K +H + S
Sbjct: 88 HSFESLQDLSVHMIKTKHYQKVSGPSS 114
Score = 39.7 bits (92), Expect = 7e-04
Identities = 11/65 (16%), Positives = 18/65 (27%)
Query: 702 KRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRH 761
+ D + + RK +L K +C C F L+ H
Sbjct: 40 NETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99
Query: 762 LRKHS 766
+ K
Sbjct: 100 MIKTK 104
Score = 39.0 bits (90), Expect = 0.001
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Query: 903 SRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGEYR 952
S + G F C C+ A+ L HM + TG YR
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-----TGHYR 46
Score = 30.5 bits (68), Expect = 0.95
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 9/94 (9%)
Query: 414 KAKTVYTCEMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDENKASVNTAKVKKESVEGVS 473
+ + C+ C + + L H + +D ++ N K + +
Sbjct: 15 TGASKFRCKDCSAAYDTLVELTVHMNETGHY------RDDNHETDNNNPKRWSKPRKRSL 68
Query: 474 MEGKSLSEFSGPVGNFKCALCEKTFVRKQTLDRH 507
+E + + KC C +F Q L H
Sbjct: 69 LEMEGKEDAQKV---LKCMYCGHSFESLQDLSVH 99
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 65.5 bits (160), Expect = 2e-13
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 219 KSDLNRHSRIHNGIKPFLCSM--CAKCFSRKDDLNRHMKIHEGSKRYLCTM--CPKCFTR 274
S + + I+ +CS C K + + L H + H G K + C+ C + F R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 275 KDDLNRHMRNH 285
D+L+RH R H
Sbjct: 62 SDELSRHRRTH 72
Score = 65.5 bits (160), Expect = 2e-13
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Query: 877 KSDLNRHMRKHDGVKPFLCSI--CAKNFSRKDDLNRHMRKHDGIKPFLCSM--CAEAFSR 932
S + ++ +CS C K + + L H R H G KPF CS C F+R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 933 KDHLKKHMRK 942
D L +H R
Sbjct: 62 SDELSRHRRT 71
Score = 65.1 bits (159), Expect = 2e-13
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 191 RSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCSM--CAKCFSR 246
S + IR C+ C + S L H+R H G KPF CS C + F+R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 247 KDDLNRHMKIH 257
D+L+RH + H
Sbjct: 62 SDELSRHRRTH 72
Score = 64.3 bits (157), Expect = 4e-13
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 849 KSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCSI--CAKNFSR 904
S + I++H C+ C + S L H R H G KPF CS C + F+R
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 905 KDDLNRHMRKH 915
D+L+RH R H
Sbjct: 62 SDELSRHRRTH 72
Score = 63.6 bits (155), Expect = 8e-13
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 167 NRHMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCNV--CYICFTNKSDL 222
+ I+ CS C +++ + S+L H R H G +PF C+ C F +L
Sbjct: 6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65
Query: 223 NRHSRIH 229
+RH R H
Sbjct: 66 SRHRRTH 72
Score = 62.4 bits (152), Expect = 2e-12
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 727 KTTLKRHVRIHTGIKEFQCWI--CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSI-- 782
+ + I+ C C K + + SHL H R H+G E P++CS
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG-------EKPFSCSWKG 54
Query: 783 CDRKFTIKGQLSRHLRAH 800
C+R+F +LSRH R H
Sbjct: 55 CERRFARSDELSRHRRTH 72
Score = 58.9 bits (143), Expect = 3e-11
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 700 RRKRGKRKKGDTPQEFPCS--ECGKVFTRKTTLKRHVRIHTGIKEFQC-WI-CSKCFMEK 755
G + + CS CGK + + + LK H R HTG K F C W C + F
Sbjct: 3 SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62
Query: 756 SHLNRHLRKH 765
L+RH R H
Sbjct: 63 DELSRHRRTH 72
Score = 57.4 bits (139), Expect = 1e-10
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 825 KRHLKVHDGVRDHQCQV--CGNRFKQKSNLNIHMKIHEGIKAHQCNV--CMMKFTNKSDL 880
+R H C CG + + S+L H + H G K C+ C +F +L
Sbjct: 6 SGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDEL 65
Query: 881 NRHMRKH 887
+RH R H
Sbjct: 66 SRHRRTH 72
Score = 53.5 bits (129), Expect = 3e-09
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 135 KREYNRHMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCSV--CSESFTQ 190
+ ++ +CS C KT+ H R H G KPF CS C F +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 191 RSNLNIHLRIH 201
L+ H R H
Sbjct: 62 SDELSRHRRTH 72
Score = 53.2 bits (128), Expect = 4e-09
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 250 LNRHMKIHEGSKRYLCTM--CPKCFTRKDDLNRHMRNHDGLKPFHCSV--CFESFTQKAL 305
+ + ++C+ C K + + L H R H G KPF CS C F +
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 306 LNIHLRIH 313
L+ H R H
Sbjct: 65 LSRHRRTH 72
Score = 50.8 bits (122), Expect = 2e-08
Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 278 LNRHMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACSI--CTESFSQKSN 333
+ + ++ CS C +++ + + L H R HT KP +CS C F++
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 334 LYIHLK 339
L H +
Sbjct: 65 LSRHRR 70
Score = 46.6 bits (111), Expect = 8e-07
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 794 SRHLRAHE-NEKPEKPQTCEV--CQKTFDKMAKFKRHLKVHDGVRDHQCQV--CGNRFKQ 848
S + + + C C KT+ K + K H + H G + C C RF +
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 849 KSNLNIHMKIH 859
L+ H + H
Sbjct: 62 SDELSRHRRTH 72
Score = 42.0 bits (99), Expect = 3e-05
Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 14/81 (17%)
Query: 755 KSHLNRHLRKHSGVVDNMEAEAPYACSI--CDRKFTIKGQLSRHLRAHENEKPEKPQTCE 812
S + S + CS C + + L H R H EKP C
Sbjct: 2 SSGSSGPQIDSSR-------IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFS---CS 51
Query: 813 V--CQKTFDKMAKFKRHLKVH 831
C++ F + + RH + H
Sbjct: 52 WKGCERRFARSDELSRHRRTH 72
Score = 39.3 bits (92), Expect = 3e-04
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 14/67 (20%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHL 110
+ C+ C K Y + + L H RTH GE F+CS C + F L
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHT----------GEKPFSCSWKGCERRFARSDEL 65
Query: 111 NRHLKSH 117
+RH ++H
Sbjct: 66 SRHRRTH 72
Score = 36.2 bits (84), Expect = 0.004
Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 4/52 (7%)
Query: 309 HLRIHTNSKPHACSI--CTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSK 358
+ + H CS C +++ + S+L H + G PF C K C +
Sbjct: 8 PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWK--GCER 57
Score = 33.9 bits (78), Expect = 0.025
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 81 AGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHLNRHLKSHSENKVFRC--EQCRFDFYVKR 136
SG + S CS C KT+ HL H ++H+ K F C + C F
Sbjct: 4 GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSD 63
Query: 137 EYNRHMKIH 145
E +RH + H
Sbjct: 64 ELSRHRRTH 72
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 62.3 bits (152), Expect = 1e-12
Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 883 HMRKHDGVKPFLCS--ICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C+ C FSR D+L+RH R H G+KP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 57.7 bits (140), Expect = 5e-11
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 225 HSRIHNGIKPFLCS--MCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C+ C FSR D+L+RH + H G K +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 56.2 bits (136), Expect = 2e-10
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 169 HMRAHEGIKPFQCSV--CSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF C+ C F++ L+ H R H G++P +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 55.0 bits (133), Expect = 4e-10
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 253 HMKIHEGSKRYLCT--MCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + CT C F+R D+L+RH R+H G+KP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 54.6 bits (132), Expect = 5e-10
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 197 HLRIHDGIRPFQCNV--CYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF C C F+ +L+RH R H+G+KP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 50.8 bits (122), Expect = 2e-08
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 281 HMRNHDGLKPFHCSV--CFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C+ C F++ L+ H R H+ KP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 50.0 bits (120), Expect = 3e-08
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 9/51 (17%)
Query: 733 HVRIHTGIKEFQC-WI-CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F C W C F L+RH R HSG P S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG-------VKPSGPS 46
Score = 49.6 bits (119), Expect = 4e-08
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 855 HMKIHEGIKAHQCNV--CMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K C C +F+ +L+RH R H GVKP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 46.5 bits (111), Expect = 5e-07
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 141 HMKIHDGVKVFLCSV--CSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C+ C F+ + +RH R+H G+KP S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 46.5 bits (111), Expect = 5e-07
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Query: 715 FPCSE--CGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C+ CG F+R L RH R H+G+K
Sbjct: 13 FACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 45.0 bits (107), Expect = 1e-06
Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)
Query: 309 HLRIHTNSKPHACS--ICTESFSQKSNLYIHLKLQHGVNPFKCD 350
T KP AC+ C FS+ L H + GV P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 45.0 bits (107), Expect = 2e-06
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 9/52 (17%)
Query: 761 HLRKHSGVVDNMEAEAPYACS--ICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
+G E P+AC+ C +F+ +LSRH R+H KP P +
Sbjct: 3 SGSSGTG-------EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS 47
Score = 44.2 bits (105), Expect = 3e-06
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 827 HLKVHDGVRDHQCQV--CGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + C CG RF + L+ H + H G+K +
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 43.1 bits (102), Expect = 7e-06
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 911 HMRKHDGIKPFLCS--MCAEAFSRKDHLKKHMRK 942
G KPF C+ C FSR D L +H R
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36
Score = 35.4 bits (82), Expect = 0.004
Identities = 11/47 (23%), Positives = 16/47 (34%), Gaps = 5/47 (10%)
Query: 796 HLRAHENEKPEKPQTC--EVCQKTFDKMAKFKRHLKVHDGVRDHQCQ 840
+ EKP C C F + + RH + H GV+
Sbjct: 3 SGSSGTGEKPFA---CTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 33.0 bits (76), Expect = 0.025
Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 113 HLKSHSENKVFRC--EQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C C + F E +RH + H GVK S
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 32.3 bits (74), Expect = 0.055
Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 12/55 (21%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQ--CPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE F C+ C F L+RH +SHS K
Sbjct: 2 SSGSSGT----------GEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 31.1 bits (71), Expect = 0.13
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 12/46 (26%)
Query: 55 KKFKCN--ICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS 98
K F C C R++R + L+ H R+H G S
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRRSHS----------GVKPSGPS 46
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 62.3 bits (151), Expect = 4e-12
Identities = 19/76 (25%), Positives = 27/76 (35%), Gaps = 9/76 (11%)
Query: 256 IHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFH--------CSVCFESFTQKALL 306
I E C + F+ +L H+ H G + C +SF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 307 NIHLRIHTNSKPHACS 322
H+R+HT K S
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 60.0 bits (145), Expect = 2e-11
Identities = 19/76 (25%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 858 IHEGIKAHQCNVCMMKFTNKSDLNRHMRK-HDGVKPF--------LCSICAKNFSRKDDL 908
I E + C F+ +L H+ H G C K+F K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 909 NRHMRKHDGIKPFLCS 924
H+R H G K S
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 57.3 bits (138), Expect = 3e-10
Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 9/75 (12%)
Query: 144 IHDGVKVFLCSVCSKTFTDKVKFNRHM-RAHEGIKPFQ--------CSVCSESFTQRSNL 194
I + C +TF+ + H+ H G C +SF + L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 195 NIHLRIHDGIRPFQC 209
H+R+H G +
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 56.1 bits (135), Expect = 7e-10
Identities = 19/75 (25%), Positives = 24/75 (32%), Gaps = 9/75 (12%)
Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHL-RIHDGIRPFQCNVCY--------ICFTNKSDLN 223
E C +F+ L H+ H G +VCY F K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 224 RHSRIHNGIKPFLCS 238
H R+H G K S
Sbjct: 80 NHIRVHTGEKSGPSS 94
Score = 55.4 bits (133), Expect = 1e-09
Identities = 20/80 (25%), Positives = 25/80 (31%), Gaps = 16/80 (20%)
Query: 711 TPQEFPCSECGKVFTRKTTLKRHV-RIHTGIKEFQCWICS--------KCFMEKSHLNRH 761
P C + F+ L HV H G E +C K F K L H
Sbjct: 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNH 81
Query: 762 LRKHSGVVDNMEAEAPYACS 781
+R H+G E S
Sbjct: 82 IRVHTG-------EKSGPSS 94
Score = 54.2 bits (130), Expect = 3e-09
Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Query: 200 IHDGIRPFQCNVCYICFTNKSDLNRH-SRIHNGIKPF--------LCSMCAKCFSRKDDL 250
I + C F+ +L H + H G C K F K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 251 NRHMKIHEGSKRYLCT 266
H+++H G K +
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 51.1 bits (122), Expect = 4e-08
Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 21/95 (22%)
Query: 89 EGGEGSFTCSQCPKTFVDKWHLNRHL-KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
+ + S C +TF L H+ H C ++
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWE---------------- 63
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
C K+F K K H+R H G K S
Sbjct: 64 ----ECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94
Score = 51.1 bits (122), Expect = 4e-08
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 802 NEKPEKPQTCEVCQKTFDKMAKFKRHL-KVHDGVRDHQ--------CQVCGNRFKQKSNL 852
++ + + + C +TF M + H+ H G + C G FK K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 853 NIHMKIHEGIKAHQC 867
H+++H G K+
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 48.0 bits (114), Expect = 4e-07
Identities = 16/76 (21%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Query: 736 IHTGIKEFQCWICSKCFMEKSHLNRHLRK-HSGVVDNMEAEAPYAC-----SICDRKFTI 789
I C + F L H+ H G + + + C + F
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE----QNNHVCYWEECPREGKSFKA 74
Query: 790 KGQLSRHLRAHENEKP 805
K +L H+R H EK
Sbjct: 75 KYKLVNHIRVHTGEKS 90
Score = 46.5 bits (110), Expect = 2e-06
Identities = 13/64 (20%), Positives = 20/64 (31%), Gaps = 9/64 (14%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRK-HDGIKPF--------LCSMCAEAFSRKDHLK 937
+ C + FS +L H+ H G C ++F K L
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79
Query: 938 KHMR 941
H+R
Sbjct: 80 NHIR 83
Score = 45.0 bits (106), Expect = 5e-06
Identities = 12/75 (16%), Positives = 20/75 (26%), Gaps = 9/75 (12%)
Query: 284 NHDGLKPFHCSVCFESFTQKALLNIHL-RIHTNSKPHA--------CSICTESFSQKSNL 334
+ C +F+ L H+ H C +SF K L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 335 YIHLKLQHGVNPFKC 349
H+++ G
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 42.6 bits (100), Expect = 4e-05
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 704 GKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
G + C GK F K L H+R+HTG K
Sbjct: 52 GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS 93
Score = 41.9 bits (98), Expect = 7e-05
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
C + ++ + L H+ G ++ + C + K+F K+ L H+
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY-WEECPREGKSFKAKYKLVNHI 82
Query: 115 KSHSENKVFRC 125
+ H+ K
Sbjct: 83 RVHTGEKSGPS 93
Score = 33.4 bits (76), Expect = 0.056
Identities = 9/50 (18%), Positives = 14/50 (28%), Gaps = 2/50 (4%)
Query: 312 IHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKCDE-KSFNCSKC 359
I C +FS L H+ ++H G C +
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPRE 68
Score = 28.4 bits (63), Expect = 3.3
Identities = 5/28 (17%), Positives = 7/28 (25%)
Query: 915 HDGIKPFLCSMCAEAFSRKDHLKKHMRK 942
+ C FS L H+
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTM 47
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 60.2 bits (147), Expect = 7e-12
Identities = 16/43 (37%), Positives = 28/43 (65%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CS+C +SFT++S L++H +IH G +P +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 55.6 bits (135), Expect = 2e-10
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS+C +SFT+K+ L++H +IHT KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS+C K F++K L+ H +IH G K +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C++C FT KS L+ H +IH G KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C IC K F +KS L+ H + H+G E P S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTG-------EKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CSIC K+F++K L+ H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 6e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CSIC +SF++KS L++H ++ G P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C++C K FT+K L+ H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS CGK FT+K+ L H +IHTG K
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C++C FT KS L+ H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C +CG F +KS L++H +IH G K +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS+C K+FT K + + H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY CSIC + FT K QL H + H EKP
Sbjct: 2 SSGSSGTG-------EKPYECSICGKSFTKKSQLHVHQQIHTGEKP 40
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS+C ++F++K L H +
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQ 33
Score = 30.6 bits (70), Expect = 0.18
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + CS C K+F K L+ H + H+ K
Sbjct: 3 SGSSGT----------GEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 2.4
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C+IC K + +K++L H + H
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIH 35
Score = 25.6 bits (57), Expect = 9.8
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C C F K + + H +IH G K S
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.8 bits (146), Expect = 7e-12
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CS C ++FT++S L+IH + H G R +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 56.7 bits (138), Expect = 1e-10
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS C ++FT+K+ L+IH + HT + S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 54.8 bits (133), Expect = 5e-10
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS C K F+RK L+ H + H G + +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 54.1 bits (131), Expect = 8e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+ C FT KS L+ H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F KS L+ H + H+G E S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTG-------ERHSGPS 44
Score = 51.7 bits (125), Expect = 7e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS C K F+RK L+ H + H G + S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K FTRK L+ H ++H G + S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 49.0 bits (118), Expect = 6e-08
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CS C ++F++KS L+IH + G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 48.7 bits (117), Expect = 8e-08
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS+CGK FTRK+ L H + HTG +
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F +KS L+IH + H G + +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS C K FT K + H ++H G + S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+ C FT KS L+ H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY CS C + FT K L H ++H E+
Sbjct: 2 SSGSSGTG-------EKPYKCSDCGKAFTRKSGLHIHQQSHTGERH 40
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS C +AF+RK L H +
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ 33
Score = 32.1 bits (74), Expect = 0.055
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + CS C K F K L+ H +SH+ +
Sbjct: 2 SSGSSGT----------GEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC+ C K + RK+ L H ++H
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 29.0 bits (66), Expect = 0.60
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C C F K + H + H G + S
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 68.3 bits (166), Expect = 1e-11
Identities = 76/473 (16%), Positives = 133/473 (28%), Gaps = 122/473 (25%)
Query: 588 DNDNSMMTATQDDDDEPFQSEVENDDD--DVPLSKRTSYYASSADE--ERPAPKKRGRKK 643
D + D F+ ++ D DV ++ D +
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67
Query: 644 GVPTRRKSTGSRKSAKSDVDTTDYESAMDTDYVDDNEAS-------ESRNE---DSGVEG 693
K + +V +Y+ M + + S E R+ D+ V
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 694 KENEDGRRKRGKRKKG---DTPQEFPCSE----CGK-VFTRKTTLKRHVRIHTGIKEFQC 745
K N + K ++ P + + GK L V+ K F
Sbjct: 128 KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF-- 185
Query: 746 WI-CSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEK 804
W+ C ++ L + + N + + ++ +I R +I+ +L R L++
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK---- 241
Query: 805 PEKPQTCEVCQKTFDKMAKFKRHLKVHDGVR--------DHQCQV-CGNRFKQKSN-LNI 854
++ L V V+ + C++ RFKQ ++ L+
Sbjct: 242 ------------------PYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFS-RKDDLNRHMR 913
H + H T S+ K R DL R +
Sbjct: 284 ATTTHISLDHHSMT-----LTPDEVK---------------SLLLKYLDCRPQDLPREVL 323
Query: 914 KHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGEYRPRRRAKKLPATDVPPTVVGSQ 973
P S+ AE+ +D T + KL
Sbjct: 324 T---TNPRRLSIIAESI--RDG----------LATWDNWKHVNCDKL------------- 355
Query: 974 LNTMISQDLTVREPPQYRS--VQNSIVSEHAH---QVLQASVGQAAASGLFWC 1021
T+I L V EP +YR + S+ AH +L L W
Sbjct: 356 -TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS----------LIWF 397
Score = 56.8 bits (136), Expect = 3e-08
Identities = 65/421 (15%), Positives = 118/421 (28%), Gaps = 104/421 (24%)
Query: 2 DVMSMMGK---YVDANEEESKDI---EKLVIEESASEDSDDEEDEDFEN-----DENSSG 50
V+ M+ K +D N D KL I +E + + +EN N
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL-NVQN 255
Query: 51 KKMVKKF--KCNI-CPKRYAR-KNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVD 106
K F C I R+ + + L+ TH S D S T + K+ +
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI--SLDHHSMT----LTPDEV-KSLLL 308
Query: 107 KW------HLNRHLKSHSENKV------FRCEQCRFDFYVKREYNRHMKIHDGVKVFL-- 152
K+ L R + + + ++ R +D + ++ I ++ L
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTI---IESSLNV 365
Query: 153 ------------CSVCSKTFTDKVKFNRHM-------RAHEGIKPFQCSVCSESFTQRSN 193
SV F + + + S ++
Sbjct: 366 LEPAEYRKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP 421
Query: 194 LNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDD---- 249
+ I + + N+ L H I + D
Sbjct: 422 KESTISIPSIYLELKVKL-----ENEYAL--HRSIVDHYNIPKTFDSDDLIPPYLDQYFY 474
Query: 250 --LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN---HDGLKPFHCSVCFESFTQKA 304
+ H+K E +R T+ F D R + HD + Q
Sbjct: 475 SHIGHHLKNIEHPERM--TLFRMVFL---DF-RFLEQKIRHDSTAWNASGSILNTLQQ-- 526
Query: 305 LLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKCLNIVR 364
L+ + KP+ C + + + N + + N CSK +++R
Sbjct: 527 -----LKFY---KPYICDNDPK-YERLVNAILDFLPKIEENLI--------CSKYTDLLR 569
Query: 365 I 365
I
Sbjct: 570 I 570
Score = 53.7 bits (128), Expect = 3e-07
Identities = 33/253 (13%), Positives = 77/253 (30%), Gaps = 64/253 (25%)
Query: 3 VMSMMGKYVDA-NEEESKDI-EKLVI-EESAS----------EDSDDEEDEDFENDENSS 49
+ +++ ++ E + + ++L + SA D + N +
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 50 G--KKMVKKFKCNI----------CPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTC 97
+K K+ +I YA + +H + F
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKT-------------FDS 461
Query: 98 SQCPKTFVDK---WHLNRHLKS--HSEN-KVFRCEQCRFDF-YVKREYNRHMKI-HDGVK 149
++D+ H+ HLK+ H E +FR DF ++++ KI HD
Sbjct: 462 DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR--MVFLDFRFLEQ------KIRHDSTA 513
Query: 150 VFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCS-ESFTQRSNLNIHLRIHDGIRPFQ 208
T + ++ ++ ++ V + F + N+ +
Sbjct: 514 WNASGSILNTLQQLKFYKPYICDNDPK--YERLVNAILDFLPKIEENLICSKY------- 564
Query: 209 CNVCYICFTNKSD 221
++ I + +
Sbjct: 565 TDLLRIALMAEDE 577
Score = 46.8 bits (110), Expect = 4e-05
Identities = 59/410 (14%), Positives = 108/410 (26%), Gaps = 121/410 (29%)
Query: 5 SMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKF-KCNICP 63
M+ K+V+ E + + L+ +E ++ + F K N+
Sbjct: 77 EMVQKFVE--EVLRINYKFLM-SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS- 132
Query: 64 KRYARKNRLTNHL---RTHE-------AGSG----------DEKSEGGEG------SFTC 97
R +L L R + GSG K + +
Sbjct: 133 -RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191
Query: 98 SQCPKTFVDK-WHLNRHLK-------SHSENKVFRCEQCRF---DFYVKREYNRHMKIHD 146
P+T ++ L + HS N R + + Y + +
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLL 251
Query: 147 GV------KVFL--CSVC----SKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNL 194
V F C + K TD + H + S + T
Sbjct: 252 NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAAT--TTHISLDHH-----SMTLTPDEVK 304
Query: 195 NIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHM 254
++ L+ RP DL R P S+ A+ S +D L
Sbjct: 305 SLLLKYL-DCRP-------------QDLPREVL---TTNPRRLSIIAE--SIRDGLAT-- 343
Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH-DGLKPFHCSVCFESFTQKALLNIHLRIH 313
+ K C D L + + + L+P F+ ++ I
Sbjct: 344 --WDNWKHVNC----------DKLTTIIESSLNVLEPAEYRKMFDRL---SVFPPSAHIP 388
Query: 314 T--------NSKPHACSICTESFSQKS--------------NLYIHLKLQ 341
T + + + S ++Y+ LK++
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Score = 42.5 bits (99), Expect = 9e-04
Identities = 105/717 (14%), Positives = 194/717 (27%), Gaps = 253/717 (35%)
Query: 422 EMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDENKASVNTAKVK---------------- 465
E E ++YK ++ + + + + +D K+ ++ ++
Sbjct: 10 ETGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68
Query: 466 -----------KESVEGV-------------------SMEGKSLSEFSGPVGN----FKC 491
++ VE V SM + E + N F
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA- 127
Query: 492 ALCEKTFV-RKQTLDR------------HVTVHGITGAEHDEIMGESNPATAQVNASETS 538
K V R Q + +V + G+ G+ G++ A +
Sbjct: 128 ----KYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS------GKT------WVALDVC 171
Query: 539 GDLNTSLAPSDGTIPEIDINKSDTGNMYIVTPKQEPDSIVKEEMLSDYDDNDNSMMTATQ 598
I +++ ++ P++++ EML + T+
Sbjct: 172 LSYKVQCKMDFK-IFWLNLKNCNS-----------PETVL--EMLQKLLYQIDPNWTSRS 217
Query: 599 DDDDEPFQSEVENDDDDVPLSKRTSYYAS------SADEERPAPKKRGRKKGVPTRRKST 652
D + L K Y + + K + TR
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR---- 273
Query: 653 GSRKSAKSDVDTTDYESAMDTDYVDDNEASESRNEDSGVEGKENEDGRRKRGKRKKGDTP 712
TD+ SA T ++ + S + D E + K + D P
Sbjct: 274 --------FKQVTDFLSAATTTHISLDHHSMTLTPD------EVKSLLLKYLDCRPQDLP 319
Query: 713 QEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNM 772
+E L + R + I E +R DN
Sbjct: 320 RE--------------VLTTNPRRLSIIAES------------------IRDGLATWDN- 346
Query: 773 EAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHD 832
+ CD+ TI + L +P E +K FD+++ F +
Sbjct: 347 -----WKHVNCDKLTTI---IESSL---NVLEPA-----EY-RKMFDRLSVFPPSAHIPT 389
Query: 833 GV--------RDHQCQVCGNRFKQKSNLNIHMK-----IHEGIKAHQCNVCMMKFTNKSD 879
+ V N+ + S + K I + + +K N+
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP----SIYLELK-VKLENEYA 444
Query: 880 LNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKD----- 934
L+R + H N + D + D I P+L D
Sbjct: 445 LHRSIVDHY------------NIPKTFDSD------DLIPPYL-----------DQYFYS 475
Query: 935 HLKKHMRKCYGPPTGEYRPRRR--------AKKLPATDVPPTVVGSQLNTMISQDL---- 982
H+ H++ R +K+ GS LNT+ Q L
Sbjct: 476 HIGHHLKNI--EHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTL--QQLKFYK 531
Query: 983 ---TVREPPQYRSV-----------QNSIVSEHAHQVLQASVGQAAASGLFWCAAAQ 1025
+P R V +N I S++ +L+ ++ A +F A Q
Sbjct: 532 PYICDNDPKYERLVNAILDFLPKIEENLICSKYT-DLLRIAL-MAEDEAIFEEAHKQ 586
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.0 bits (144), Expect = 2e-11
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G PF CS C + FT ++NL IH +IH G RP +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G PF C+ C FT+K++L H +IH G +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G PF+CS C K F+ K +L H KIH G + +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 53.3 bits (129), Expect = 1e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G PF CS C + FT K L IH +IHT +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 51.3 bits (124), Expect = 7e-09
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG F C C K F K++L H + H+G E P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTG-------ERPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G PF+CS C K F+ K +L H + H G +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G ++C+ C K FT K +L H + H G +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T P CS C + F+ K+NL IH K+ G P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 48.3 bits (116), Expect = 1e-07
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F CSECGKVFT KT L H +IHTG +
Sbjct: 13 FICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 45.6 bits (109), Expect = 1e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G F+CS C K FT K H + H G +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G C+ C FT+K++L H + H G +P S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G C CG F K+NL IH KIH G + +
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ CS C + FT K L H + H E+P P
Sbjct: 3 SGSSGTG-------ENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G PF+CS C + F+ K +L H + + GP +G
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSSG 46
Score = 31.7 bits (73), Expect = 0.070
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE F CS+C K F K +L H K H+ +
Sbjct: 2 SSGSSGT----------GENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 29.4 bits (67), Expect = 0.53
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
F C+ C K + K L H + H
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIH 35
Score = 27.8 bits (63), Expect = 1.7
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + F C +C F K H KIH G + S
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 59.1 bits (144), Expect = 2e-11
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C + + + NL++H ++H G RP +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C + +K +L+ H ++H G +P S
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C + + K L++H ++HT +P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K ++ K +L+ H K+H G + +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K + K +L+ H + H+G E P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTG-------ERPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K ++ K +L+ H + H G +P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C + ++ K NL +H K+ G P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K + K +L+ H + H G +P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C +CGK + K L H ++HTG +
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C+ CG + K NL++H K+H G + +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C + +K +L+ H + H G +P S
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K + K + H + H G +P S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
Score = 37.5 bits (88), Expect = 5e-04
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C + ++ K +L H +
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C C + + K L H + H E+P
Sbjct: 3 SGSSGTG-------EKPYKCEKCGKGYNSKFNLDMHQKVHTGERP 40
Score = 29.4 bits (67), Expect = 0.45
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C +C K + K++L+ H K H+ +
Sbjct: 3 SGSSGT----------GEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 27.9 bits (63), Expect = 1.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C K Y K L H + H
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 26.7 bits (60), Expect = 4.7
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++CE+C + K + H K+H G + S
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPFQC C + FTQ S+L+ H R+H G +P +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C + FTQ + L+ H R+HT KP S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K FQC C K F + SHL+ H R H+G E P S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTG-------EKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KPF C C K F++ L+ H ++H G K +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PFQC C FT S L+ H R+H G KP S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 49.9 bits (120), Expect = 3e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K F++ L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K FT+ L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 47.2 bits (113), Expect = 3e-07
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK FT+ + L H R+HTG K
Sbjct: 13 FQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K FT + H R H G KP S
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + QC+ CG RF Q S+L+ H ++H G K +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP C C + F+Q S+L+ H ++ G P
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K QC C +FT S L+ H R H G KP S
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44
Score = 40.6 bits (96), Expect = 4e-05
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C C + F++ HL H R K GP +G
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSSG 46
Score = 39.8 bits (94), Expect = 1e-04
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
SG E P+ C C ++FT L H R H EKP P +
Sbjct: 2 SSGSSGSG-------EKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.061
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE F C +C K F HL+ H + H+ K
Sbjct: 3 SGSSGS----------GEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 28.7 bits (65), Expect = 0.79
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C C KR+ + + L +H R H
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVH 35
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G +P+ C+VC ++FT RSNL H +IH G +P +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 7e-10
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G +P++C++C K F+ + +L +H KIH G K
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 54.0 bits (131), Expect = 8e-10
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G +P+ C+VC ++FT ++ L H +IHT KP S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 54.0 bits (131), Expect = 8e-10
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G RP+ C VC FT++S+L +H +IH G KP S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG + + C +C K F ++S+L +H + H+G E P S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTG-------EKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G +P++C++C K F+ + +L +H + H G KP S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + Y+CT+C K FT + +L +H + H G KP S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T +P+ C++C ++F+ +SNL H K+ G P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ CGK FT ++ L +H +IHTG K
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 5e-07
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R + C VCG F +SNL H KIH G K +
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 5e-07
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + ++C+VC K FTD+ +H + H G KP S
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 9e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + + C VC FT++S+L +H + H G KP S
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQ 809
+G E PY C++C + FT + L +H + H EKP P
Sbjct: 2 SSGSSGTG-------ERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G +P++C++C +AF+ + +L KH + K GP +G
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG 46
Score = 30.2 bits (69), Expect = 0.29
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C+ C K F D+ +L +H K H+ K
Sbjct: 3 SGSSGT----------GERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 2.4
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ + C +C K + ++ L H + H
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIH 35
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C C + FTQ S L+ H R+H G +P +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 54.8 bits (133), Expect = 5e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C + FTQ + L+ H R+HT KP S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K F+C C K F + S L+ H R H+G E P S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTG-------EKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KPF C C K F++ L+ H ++H G K +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C FT S L+ H R+H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K F++ L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K FT+ L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 4e-07
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK FT+ + L H R+HTG K
Sbjct: 13 FKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C+ CG RF Q S L+ H ++H G K +
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP C C + F+Q S L+ H ++ G P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K FT + + H R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C +FT S L+ H R H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44
Score = 41.4 bits (98), Expect = 3e-05
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E P+ C C ++FT QL H R H EKP P
Sbjct: 2 SSGSSGSG-------EKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 8e-05
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KPF C C + F++ L H R
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33
Score = 31.0 bits (71), Expect = 0.12
Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 10/54 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ + GE F C +C K F L+ H + H+ K
Sbjct: 2 SSGSSGS----------GEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.43
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC C KR+ + ++L +H R H
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVH 35
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CS C +SFT +S L IH + H G R +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 55.6 bits (135), Expect = 3e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS C +SFT K+ L IH + HT + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+ C FT KS L H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS C K F+ K L H K H G + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 52.2 bits (126), Expect = 4e-09
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F KS L H + H+G E S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTG-------ERHSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS C K+F+ K L H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K FT K L H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CS C +SF+ KS L IH K G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS+CGK FT K+ L+ H + HTG +
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F KS L IH K H G + +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS C K+FT K + H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+ C FT KS L H + H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY CS C + FT K +L H + H E+ P
Sbjct: 3 SGSSGTG-------EKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS C ++F+ K L+ H +
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33
Score = 31.7 bits (73), Expect = 0.069
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + CS C K+F K L H K H+ +
Sbjct: 2 SSGSSGT----------GEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 28.7 bits (65), Expect = 0.86
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC+ C K + K+RL H + H
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 27.5 bits (62), Expect = 2.2
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C C F K H K H G + S
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C+ C +SF + NL H RIH G + +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 54.1 bits (131), Expect = 9e-10
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C+ C K F K +L H +IH G K +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C F K +L H RIH G K S
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C+ C +SF K L H RIHT K S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K F K +L H R H+G E S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG-------EKSGPSS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C+ C K+F K +L H R H G K S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 48.7 bits (117), Expect = 8e-08
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + CT C K F K +L H R H G K S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C+ C +SF K NL H ++ G
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C+ CGK F K L H RIHTG K
Sbjct: 13 FECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F K +L H R H G K S
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C+ C K+F K H R H G K S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C CG F+ K NL H +IH G K+ +
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KPF C+ C ++F K +L H R
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G + P+ C+ C + F KG L H R H EK
Sbjct: 3 SGSSGTG-------QKPFECTHCGKSFRAKGNLVTHQRIHTGEKS 40
Score = 32.9 bits (76), Expect = 0.029
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + G+ F C+ C K+F K +L H + H+ K
Sbjct: 2 SSGSSGT----------GQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 29.0 bits (66), Expect = 0.72
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C C K + K L H R H
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 28.3 bits (64), Expect = 1.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C C F K H +IH G K S
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C C +S+ QR +L H R+H G +P +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C +S+ Q+ L H R+HT KP S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C C K ++++ L +H ++H G K +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K + ++ HL +H R H+G E P S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTG-------EKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C + + L +H R+H G KP S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K+++++ L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K + ++ L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK + ++ L +H R+HTG K
Sbjct: 13 FKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 7e-07
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C CG + Q+ +L H ++H G K +
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 7e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K++ +V +H R H G KP S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C C +S++Q+ +L H ++ G P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C + + L +H R H G KP S
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KPF C C ++++++ HL +H R
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQR 33
Score = 39.0 bits (92), Expect = 2e-04
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ C C + + + L++H R H EKP P
Sbjct: 2 SSGSSGTG-------EKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.073
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE F C +C K++ + HL +H + H+ K
Sbjct: 3 SGSSGT----------GEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.47
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F+C +C + + +H ++H G K S
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.64
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC C K Y ++ LT H R H
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVH 35
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G+KP+ CS C+++F+ +S L +H R H G++P +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 55.2 bits (134), Expect = 3e-10
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G+KP+ CS C ++F+ K+ L +H R HT KP S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G+KP+ CS CAK FS K L H + H G K +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 20/43 (46%), Positives = 22/43 (51%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
GVKP+ CS CAK FS K L H R H G+KP S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG+K + C C+K F KS L H R H+G P S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTG-------VKPSGPS 44
Score = 51.0 bits (123), Expect = 9e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G++P+ C+ C F+ KS L H R H G+KP S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CS C ++FS KS L +H + GV P
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 49.1 bits (118), Expect = 6e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K F+ K L H R+H G+KP S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
GV+ + C C F KS L +H + H G+K +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
+ CS+C K F+ K+ L H R HTG+K
Sbjct: 13 YGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 46.4 bits (111), Expect = 5e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
GVK + CS C+KTF+ K + H R+H G+KP S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G+K + C+ C F+ KS L H R H GVKP S
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G PY CS C + F++K QL H R+H KP
Sbjct: 2 SSGSSGTG-------VKPYGCSQCAKTFSLKSQLIVHQRSHTGVKP 40
Score = 40.2 bits (95), Expect = 8e-05
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G+KP+ CS CA+ FS K L H R
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR 33
Score = 31.7 bits (73), Expect = 0.065
Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + G + CSQC KTF K L H +SH+ K
Sbjct: 2 SSGSSGT----------GVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 29.4 bits (67), Expect = 0.51
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C QC F +K + H + H GVK S
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44
Score = 29.4 bits (67), Expect = 0.52
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C+ C K ++ K++L H R+H
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSH 35
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 58.7 bits (143), Expect = 2e-11
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CSVC ++F+ R +L++H RIH G +P +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CSVC ++F+ + L++H RIH+ KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS+C K FS + L+ H +IH G K +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+VC F+++ L+ H RIH+G KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C +C K F + L+ H R HSG + P S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSG-------KKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS+C K FS + L+ H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C++C K F+ + L+ H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS CGK F+ + +L H RIH+G K
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CS+C ++FS + +L +H ++ G P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CSVC K F+ + + H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C VCG F + +L++H +IH G K +
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+VC F+++ L+ H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS+C +AFS + L H R
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33
Score = 38.6 bits (91), Expect = 2e-04
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY CS+C + F+ + LS H R H +KP
Sbjct: 2 SSGSSGTG-------EKPYECSVCGKAFSHRQSLSVHQRIHSGKKP 40
Score = 29.0 bits (66), Expect = 0.58
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + CS C K F + L+ H + HS K
Sbjct: 3 SGSSGT----------GEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
Score = 27.1 bits (61), Expect = 3.5
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C++C K ++ + L+ H R H
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 25.9 bits (58), Expect = 7.5
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C C F ++ + H +IH G K S
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C VCS++FTQ+++L H + H G +P +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C VC ++FTQKA L H + HT KP S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C +C+K F++K L +H K H G K +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C +CSK F +K+HL +H + H+G E P S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTG-------EKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C VC FT K+ L +H + H G KP S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 4e-08
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C +C+K F++K L +H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K FT+K L +H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T KP+ C +C+++F+QK++L H K G P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS 45
Score = 46.8 bits (112), Expect = 4e-07
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C C K FT+K L +H + HTG K
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 7e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C+VC F QK++L H K H G K +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 1e-06
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C VCSK FT K +H + H G KP S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C VC FT K+ L +H + H G KP S
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C +C++AF++K HL +H +
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33
Score = 39.1 bits (92), Expect = 2e-04
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C +C + FT K L++H + H EKP
Sbjct: 2 SSGSSGTG-------EKPYECKVCSKAFTQKAHLAQHQKTHTGEKP 40
Score = 33.3 bits (77), Expect = 0.021
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C C K F K HL +H K+H+ K
Sbjct: 3 SGSSGT----------GEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
Score = 28.7 bits (65), Expect = 0.84
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C +C K + +K L H +TH
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 28.7 bits (65), Expect = 1.0
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C+ C F K +H K H G K S
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.9 bits (141), Expect = 3e-11
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C +C +SF RS LN H +H +P +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 54.0 bits (131), Expect = 1e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C++C F +S LNRHS +H KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C +C +SF ++ LN H +HT KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C IC K F +S LNRH H+ E P S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTA-------EKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C +C K F + LNRH +H K +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C IC K+F + LNRH H KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C +C K F + LNRH H KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
T KP C IC +SF +S L H + P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C CGK F ++ L RH +HT K
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C +C K+F + + NRH H KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 45.9 bits (110), Expect = 7e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C++C F +S LNRH H KP S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C +CG F +S LN H +H K +
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C +C ++F + L +H K GP +G
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG 46
Score = 39.8 bits (94), Expect = 9e-05
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ C IC + F + +L+RH H EKP P
Sbjct: 3 SGSSGTG-------EKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 32.8 bits (76), Expect = 0.026
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE F C C K+F + LNRH H+ K
Sbjct: 2 SSGSSGT----------GEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 30.9 bits (71), Expect = 0.14
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC+IC K + ++RL H H
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 29.4 bits (67), Expect = 0.55
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F+C+ C F + NRH +H K S
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 27.1 bits (61), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
FKC +C K+F + L+RH VH T
Sbjct: 13 FKCDICGKSFCGRSRLNRHSMVH--TA 37
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.9 bits (141), Expect = 4e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KPF+CS C ++F +SNL +H R H G +P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 54.8 bits (133), Expect = 5e-10
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF CS C K F+ K +L H + H G K +
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 6e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF CS C ++F K+ L +H R HT KP S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K F KS+L H R H+G E P S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTG-------EKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF CS C K F+ K +L H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C+ C F KS+L H R H G KP S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C+ C K F K +L H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F CSEC K F K+ L H R HTG K
Sbjct: 13 FECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP CS C ++F+ KSNL +H + G P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 3e-07
Identities = 16/43 (37%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F CS C K F K H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C+ C F KS+L H R H G KP S
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + +C C F KSNL +H + H G K
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KPF CS C +AF+ K +L H R
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR 33
Score = 39.8 bits (94), Expect = 1e-04
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E P+ CS C + F K L H R H EKP
Sbjct: 2 SSGSSGTG-------EKPFECSECQKAFNTKSNLIVHQRTHTGEKP 40
Score = 33.2 bits (77), Expect = 0.023
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE F CS+C K F K +L H ++H+ K
Sbjct: 2 SSGSSGT----------GEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.57
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C+ C K + K+ L H RTH
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTH 35
Score = 29.0 bits (66), Expect = 0.68
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C +C+ F K H + H G K S
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.9 bits (141), Expect = 4e-11
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C ++F Q++NL H RIH G +P +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F++K +L +H +IH G K +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 1e-09
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C ++F QKA L H RIHT KP S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C F K++L +H RIH G KP S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F +K++L +H R H+G E P S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTG-------EKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F +K +L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F++K +L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F +K L +H RIHTG K
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 7e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C ++F+QK+NL H ++ G P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F QK+NL H +IH G K +
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F K +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C F K++L +H R H G KP S
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C C +AF++K +L +H R K GP +G
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSSG 46
Score = 39.4 bits (93), Expect = 1e-04
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C C + F K L++H R H EKP P
Sbjct: 2 SSGSSGTG-------EKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.25
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + C +C K F K +L +H + H+ K
Sbjct: 2 SSGSSGT----------GEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.0
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K +RC +C F K +H +IH G K S
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C C K +A+K LT H R H
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIH 35
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 5e-11
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H RIH G +P +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KP+ C+ C K F++ L H +IH G K +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K ++C C K F + SHL H R H+G E P S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTG-------EKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H RIHT KP S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L H RIH G KP S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L H R H G KP S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 48.6 bits (117), Expect = 8e-08
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L H R H G KP S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L H RIHTG K
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
+ KP+ C+ C + F+Q S+L H ++ G P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45
Score = 45.6 bits (109), Expect = 1e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H +IH G K +
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT H R H G KP S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L H R H G KP S
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F++ HL H R
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33
Score = 39.4 bits (93), Expect = 1e-04
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E PY C+ C + FT L+ H R H EKP P
Sbjct: 2 SSGSSGSG-------EKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.13
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + C++C K F HL H + H+ K
Sbjct: 2 SSGSSGS----------GEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 29.8 bits (68), Expect = 0.38
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K ++C +C F H +IH G K S
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.95
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + LTNH R H
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIH 35
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 5e-11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G +P +C+ C +SF Q ++L H RIH G +P +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G +P C+ C +SF Q A L H RIHT KP S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G +P C+ C K F + L +H +IH G K +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG + +C C K F++ +HL +H R H+G E P S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTG-------EKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G RP +CN C F + L +H RIH G KP S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G +P C+ C K+F + L +H R H G KP S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + + C C K F + L +H R H G KP S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F + L +H RIHTG K
Sbjct: 13 HKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 5e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T +PH C+ C +SF Q ++L H ++ G P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R H+C CG F Q ++L H +IH G K +
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + H+CN C F + L +H R H G KP S
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + C+ C K+F +H R H G KP S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G +P C+ C ++F + HL +H R
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQR 33
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E P+ C+ C + F L +H R H EKP
Sbjct: 2 SSGSSGTG-------ERPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40
Score = 30.9 bits (71), Expect = 0.12
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE C++C K+F+ HL +H + H+ K
Sbjct: 2 SSGSSGT----------GERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 29.0 bits (66), Expect = 0.78
Identities = 10/43 (23%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + + +C +C F +H +IH G K S
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.5
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ KCN C K + + L H R H
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIH 35
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.6 bits (140), Expect = 5e-11
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KP+ CS C ++F+ +S L IH+R H G +P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS C ++F+ K+ L IH+R H+ KP S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 54.9 bits (133), Expect = 4e-10
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS C K FS K L HM+ H G K +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 54.1 bits (131), Expect = 8e-10
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G K + C C K F KS+L H+R HSG E P S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSG-------EKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 19/43 (44%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS C K FS K L HMR H G KP S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 52.6 bits (127), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ C+ C F++KS L H R H+G KP S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K F+ K L HMR H G KP S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 47.2 bits (113), Expect = 3e-07
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
KP+ CS C ++FS KS L IH++ G P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS C K F+ K HMR H G KP S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F+ K+ L H+R H+G K
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C+ C F++KS L HMR H G KP S
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + + C CG F KS L IHM+ H G K
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS C +AFS K +L HMR
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33
Score = 40.6 bits (96), Expect = 5e-05
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY CS C + F+ K L H+R H EKP
Sbjct: 2 SSGSSGAG-------EKPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40
Score = 34.1 bits (79), Expect = 0.011
Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + CS+C K F K +L H+++HS K
Sbjct: 2 SSGSSGA----------GEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 30.2 bits (69), Expect = 0.24
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C +C F K HM+ H G K S
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44
Score = 29.1 bits (66), Expect = 0.64
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C+ C K ++ K+ L H+RTH
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTH 35
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 5e-11
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K ++C VC + F+Q S+L H R+H G +P +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + ++C+VC F+ S L H R+H G KP S
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K + C VC + F+Q + L H R+HT KP S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G K ++C +C K F + SHL H R H+G E P S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTG-------EKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K + C +C K FS+ L H ++H G K +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
K + C +C + FSQ S+L H ++ G P
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K + C +C K FS+ L H R H G KP S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K F++ L H R H G KP S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C CGK F++ + L+ H R+HTG K
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C VCG F Q S+L H ++H G K +
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+VC +F+ S L H R H G KP S
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C VC K F+ H R H G KP S
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G K + C +C + FS+ HL+ H R K GP +G
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSSG 46
Score = 37.9 bits (89), Expect = 4e-04
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
G E Y C +C ++F+ L H R H EKP P +
Sbjct: 3 SGSSGMG-------EKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.53
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC++C K +++ + L H R H
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 28.6 bits (65), Expect = 0.87
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C C K F HL H + H+ K
Sbjct: 3 SGSSGM----------GEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 5e-11
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ KP++C C + + +R NL++H R+H G + +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ KP+ C C + + ++ L++H R+H K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+ KP+ C C K ++R+ +L+ H ++H G K +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
+P++C C + + +L+ H R+H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 49.0 bits (118), Expect = 6e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
KP+ C C K ++R+ +L+ H R H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 11/49 (22%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+ K ++C C K + + +L+ H R H G E S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMG-------EKTSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
K Y C C K + R+ +L+ H R H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 8/41 (19%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP+ C C + ++++ NL +H ++ G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C +CGK + R+ L H R+H G K
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 9/42 (21%), Positives = 21/42 (50%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
+ ++C+ CG + ++ NL++H ++H G K +
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
K ++C C + + +L+ H R H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 43.6 bits (104), Expect = 5e-06
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
K + C C K + ++ + H R H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 13/48 (27%), Positives = 16/48 (33%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
S E PY C C + + + L H R H EK P
Sbjct: 3 SGSSGSV-------EKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 39.4 bits (93), Expect = 1e-04
Identities = 12/44 (27%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
KP+ C C + ++R+ +L H R K GP +G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG 46
Score = 29.8 bits (68), Expect = 0.42
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C K Y R+ L H R H
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 29.4 bits (67), Expect = 0.52
Identities = 8/52 (15%), Positives = 16/52 (30%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + E + C C K + + +L+ H + H K
Sbjct: 2 SSGSSGS----------VEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 28.6 bits (65), Expect = 0.94
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K ++CE C + + + H ++H G K S
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 5e-11
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C C ++F Q +L HLRIH G +P +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 54.8 bits (133), Expect = 5e-10
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KPF C C K F + L H++IH G K +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 3e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K F+C C K F + HL HLR H+G E P S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTG-------EKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 18/43 (41%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C ++F Q L HLRIHT KP S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 9e-09
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C F L H RIH G KP S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K F + L H+R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 6e-08
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F + L H+R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK F + L H+RIHTG K
Sbjct: 13 FKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C+ CG F+Q +L H++IH G K +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K F + H+R H G KP S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP C C ++F Q +L HL++ G P
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F L H+R H G KP S
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KPF C C +AF + HL H+R
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33
Score = 39.0 bits (92), Expect = 2e-04
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
SG E P+ C C + F L+ HLR H EKP P +
Sbjct: 2 SSGSSGSG-------EKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.078
Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE F C +C K F HL HL+ H+ K
Sbjct: 3 SGSSGS----------GEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.53
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K F+C++C F H++IH G K S
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC C K + + L +HLR H
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIH 35
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.5 bits (140), Expect = 6e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H RIH G++P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F++ L H +IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H RIHT KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L H RIH G+KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 51.8 bits (125), Expect = 7e-09
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + SHL H R H+G P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTG-------VKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L H R H G+KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L H R H G+KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 46.7 bits (112), Expect = 4e-07
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L H RIHTG+K
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C + F+Q S+L H ++ GV P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H +IH G+K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT H R H G+KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L H R H GVKP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C+ C + F++ HL H R K GP +G
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG 46
Score = 39.0 bits (92), Expect = 2e-04
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + FT L+ H R H KP P
Sbjct: 2 SSGSSGTG-------EKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 30.6 bits (70), Expect = 0.17
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F HL H + H+ K
Sbjct: 3 SGSSGT----------GEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 28.6 bits (65), Expect = 0.85
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F H +IH GVK S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44
Score = 27.9 bits (63), Expect = 1.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + L NH R H
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIH 35
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 6e-11
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C+VC ++F ++LN HLR+H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+VC ++F A LN HLR+HT S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C++C K F LN+H+++H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ CNVC F + LN+H R+H S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C +C K F+ +HLN+HLR H+ E S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQ-------ETLSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K F LN+H+R H S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C++C K F LN+H+R H S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ CGK F L +H+R+HT
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+VC K F N+H+R H S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + CNVC F + LN+H+R H S
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
T KP++C++C ++F ++L HL++
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 10/43 (23%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C VCG F ++LN H+++H +
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C++C +AF HL +H+R GP +G
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSSG 46
Score = 38.3 bits (90), Expect = 3e-04
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY+C++C + F + L++HLR H E P
Sbjct: 2 SSGSSGTG-------EKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 33.3 bits (77), Expect = 0.019
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE ++C+ C K FV HLN+HL+ H++ +
Sbjct: 2 SSGSSGT----------GEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 30.2 bits (69), Expect = 0.30
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C C F + N+H+++H + S
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 28.6 bits (65), Expect = 1.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN+C K + L HLR H
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVH 35
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 6e-11
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C+ C ++FT RSNL H +IH +P +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP++C+ C K F+ + +L +H KIH K +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++FT ++ L H +IHT KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ C C FT +S+L +H +IH KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP++C+ C K F+ + +L +H + H KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y+C C K FT + +L +H + H KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C C K F +S+L +H + H+ + P S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTK-------QKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK FT ++ L +H +IHT K
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F+ +SNL H K+ P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K ++C+ C K FT + +H + H KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C C FT +S+L +H + H KP S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C CG F +SNL H KIH K +
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP++C+ C +AF+ + +L KH + K GP +G
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG 46
Score = 38.6 bits (91), Expect = 3e-04
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + FTI+ L +H + H +KP
Sbjct: 3 SGSSGTG-------EKPYICAECGKAFTIRSNLIKHQKIHTKQKP 40
Score = 31.3 bits (72), Expect = 0.099
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C++C K F + +L +H K H++ K
Sbjct: 2 SSGSSGT----------GEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 27.9 bits (63), Expect = 2.0
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C +C F ++ +H KIH K S
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
Score = 27.1 bits (61), Expect = 3.6
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C C K + ++ L H + H
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIH 35
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.2 bits (139), Expect = 7e-11
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP +C C +SF+ S L +H RIH G P +
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP C C +SF+ + L +H RIHT P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP C C K FS L H +IH G +
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 16/50 (32%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K +C C K F S L H R H+G E P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTG-------ENPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P +C C F+ S L H RIH G P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 49.5 bits (119), Expect = 4e-08
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP C C K+FS L H R H G P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F+ L H R H G P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KPH C C +SFS S L +H ++ G NP
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F+ + L H RIHTG
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + H+C+ CG F S L +H +IH G +
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K H+C C F+ S L H R H G P S
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K C C K+F+ + H R H G P S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
Score = 39.8 bits (94), Expect = 9e-05
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP C C ++FS L H R
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E P+ C C + F+ QL H R H E P
Sbjct: 2 SSGSSGTG-------EKPHECRECGKSFSFNSQLIVHQRIHTGENP 40
Score = 27.9 bits (63), Expect = 1.5
Identities = 9/51 (17%), Positives = 14/51 (27%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE C +C K+F L H + H+
Sbjct: 3 SGSSGT----------GEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 27.9 bits (63), Expect = 1.6
Identities = 10/43 (23%), Positives = 14/43 (32%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K C +C F + H +IH G S
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 8e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CS C ++F + ++LN H RIH G RP +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KP+ CS C K F R LN H +IH G + +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K ++C C K F +HLN H R H+G P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTG-------YRPSGPS 44
Score = 51.7 bits (125), Expect = 7e-09
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS C ++F + LN H RIHT +P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 51.3 bits (124), Expect = 7e-09
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+ C F + LN H RIH G +P S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS C K F R LN H R H G +P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 49.0 bits (118), Expect = 6e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K F R LN H R H G +P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F R T L H RIHTG +
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F + ++LN H +IH G + +
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 44.0 bits (105), Expect = 4e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS C K F N H R H G +P S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 43.6 bits (104), Expect = 5e-06
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP+ CS C ++F + ++L H ++ G P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+ C F + LN H R H G +P S
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS C +AF R HL +H R
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33
Score = 37.9 bits (89), Expect = 5e-04
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E PY CS C + F L+ H R H +P P
Sbjct: 2 SSGSSGSG-------EKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 31.7 bits (73), Expect = 0.086
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + CS+C K F HLN H + H+ +
Sbjct: 3 SGSSGS----------GEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS 45
Score = 29.0 bits (66), Expect = 0.71
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K ++C +C F+ N H +IH G + S
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44
Score = 28.2 bits (64), Expect = 1.1
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC+ C K + R L H R H
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRRIH 35
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 8e-11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K F+C+ C ++FTQ S+L +H RIH G +P +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K F C+ C ++FTQ + L +H RIHT KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + F+CN C FT S L H RIH G KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K F C+ C K F++ L H +IH G K +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G K F+C C K F + S L H R H+G E P S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTG-------EKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K F C+ C K F++ L H R H G KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K FT+ L H R H G KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+EC K FT+ ++L H RIHTG K
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
K C+ C ++F+Q S+L +H ++ G P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +CN C FT S L H R H G KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K+F C+ C KTFT H R H G KP S
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 3e-06
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C C F Q S+L +H +IH G K +
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G + + C+ C + FT L+ H R H EKP P
Sbjct: 3 SGSSGAG-------KKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G K F C+ C + F++ L H R K GP +G
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSSG 46
Score = 29.4 bits (67), Expect = 0.54
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKCN C K + + + LT H R H
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 28.6 bits (65), Expect = 0.87
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ G+ F C++C KTF L H + H+ K
Sbjct: 3 SGSSGA----------GKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 57.1 bits (139), Expect = 8e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C ++F+Q ++L H R+H G +P +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K FS+ L +H ++H G K +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C ++F+Q L H R+HT KP S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + +HL +H R H+G E P S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTG-------EKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C F+ + L +H R+H G KP S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K FS+ L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F++ L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F++ T L +H R+HTG K
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C ++FSQ ++L H ++ G P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F+ +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C+ CG F Q ++L H ++H G K +
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 5e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C F+ + L +H R H G KP S
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C +AFS+ HL +H R
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33
Score = 37.9 bits (89), Expect = 5e-04
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C C + F+ L +H R H EKP
Sbjct: 2 SSGSSGTG-------EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40
Score = 30.9 bits (71), Expect = 0.16
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C +C K F HL +H + H+ K
Sbjct: 3 SGSSGT----------GEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 27.1 bits (61), Expect = 3.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C C K +++ L H R H
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVH 35
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.2 bits (139), Expect = 8e-11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++CS C +SF ++S L++H RIH G P +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 55.2 bits (134), Expect = 4e-10
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ CS C +SF +K+ L++H RIHT P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+ C F KS L+ H RIH G P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G KP+ CS C K F +K L+ H +IH G
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 52.2 bits (126), Expect = 4e-09
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F++KS L+ H R H+G E P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG-------ENPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ CS C K+F +K L+ H R H G P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 49.5 bits (119), Expect = 4e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C+ C K F +K L+ H R H G P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ CS C +SF +KS L++H ++ G NP
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS+CGK F +K+ L H RIHTG
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 45.6 bits (109), Expect = 7e-07
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+ C F KS L+ H R H G P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + CS C K+F K + + H R H G P S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F +KS L++H +IH G +
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY CS C + F K QL H R H E P
Sbjct: 3 SGSSGTG-------EKPYECSDCGKSFIKKSQLHVHQRIHTGENP 40
Score = 38.7 bits (91), Expect = 3e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ CS C ++F +K L H R
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR 33
Score = 30.2 bits (69), Expect = 0.22
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + CS C K+F+ K L+ H + H+
Sbjct: 3 SGSSGT----------GEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 27.9 bits (63), Expect = 1.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C+ C K + +K++L H R H
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 27.5 bits (62), Expect = 2.4
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C C F K + + H +IH G S
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 8e-11
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G + ++CS C ++F ++S L +H RIH G +P +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 6e-10
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G + + CS C K F+RK L H +IH G K +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G + + CS C ++F +K+ L +H RIHT KP S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G + + CS C K F+RK L H R H G KP S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 4e-09
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G R ++C+ C F KS L H RIH G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 9e-09
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG + ++C C K F KS L H R H+G E P S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTG-------EKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + Y C+ C K F RK L H R H G KP S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 18/29 (62%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F RK+TL H RIHTG K
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T + + CS C ++F++KS L +H ++ G P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R ++C CG F +KS L +H +IH G K +
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + + CS C K F K H R H G KP S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + ++C+ C F KS L H R H G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 41.3 bits (98), Expect = 3e-05
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G + + CS C +AF+RK L H R K GP +G
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSSG 46
Score = 39.0 bits (92), Expect = 2e-04
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E Y CS C + F K L H R H EKP
Sbjct: 2 SSGSSGTG-------ERHYECSECGKAFARKSTLIMHQRIHTGEKP 40
Score = 30.5 bits (70), Expect = 0.18
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + CS+C K F K L H + H+ K
Sbjct: 3 SGSSGT----------GERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.0
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + + + C +C F K H +IH G K S
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44
Score = 27.8 bits (63), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ ++C+ C K +ARK+ L H R H
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIH 35
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 57.1 bits (139), Expect = 8e-11
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C VC ++F S+L H +H G RP +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C VC F S L +H +H+G +P S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C +C K F L +H +H G + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C +C K F SHL +H HSG E P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG-------ERPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C VC ++F + L H +H+ +P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C +C K F L +H H G +P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 46.7 bits (112), Expect = 4e-07
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K F L +H H G +P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 46.0 bits (110), Expect = 7e-07
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C CGK F + L +H +H+G +
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++CQVCG F+ S+L H +H G + +
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 11/41 (26%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C +C ++F S+L H + G P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 43.7 bits (104), Expect = 5e-06
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C VC K F +H H G +P S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C VC F S L +H H G +P S
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C +C +AF HL +H + GP +G
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSSG 46
Score = 37.1 bits (87), Expect = 0.001
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C +C + F + L +H H E+P
Sbjct: 2 SSGSSGTG-------EKPYKCQVCGKAFRVSSHLVQHHSVHSGERP 40
Score = 29.0 bits (66), Expect = 0.62
Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C C K F HL +H HS +
Sbjct: 3 SGSSGT----------GEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 27.9 bits (63), Expect = 1.9
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C+ C F V +H +H G + S
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44
Score = 27.5 bits (62), Expect = 2.8
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC +C K + + L H H
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVH 35
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.8 bits (138), Expect = 8e-11
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C ++F RS+L IH H G +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 52.2 bits (126), Expect = 4e-09
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F ++ L IH H+ KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 52.2 bits (126), Expect = 5e-09
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F + L H H G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C F +S L H H+G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F +S L H HSG E P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSG-------EKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F + L H H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/43 (32%), Positives = 15/43 (34%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F + L H H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F +++L H H+G K
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F +S+L IH G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F +S L H H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F+ +S+L IH H G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F + H H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AF + L H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQA 33
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + F + L+ H H EKP
Sbjct: 2 SSGSSGTG-------EKPYKCNECGKAFRARSSLAIHQATHSGEKP 40
Score = 29.4 bits (67), Expect = 0.53
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C++C K F + L H +HS K
Sbjct: 3 SGSSGT----------GEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 28.7 bits (65), Expect = 0.97
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F + H H G K S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44
Score = 28.3 bits (64), Expect = 1.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + ++ L H TH
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATH 35
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 56.8 bits (138), Expect = 9e-11
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G +P++C C ++F +S+L H R H G +P +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G +P+ C C ++F K+ L H R HT KP S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G +P+ C C K F K L H + H G K +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G RP++C C F KS L H R H G KP S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 9e-09
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG + ++C C K F KS L H R H+G E P S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTG-------EKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G +P+ C C K F K L H R H G KP S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + Y C C K F K L H R+H G KP S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T +P+ C C ++F KS+L H + G P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS 45
Score = 46.0 bits (110), Expect = 6e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F K++L H R HTG K
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R ++C CG FK KS+L H + H G K +
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + + C C K F K H R+H G KP S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + ++C C F KS L H R H G KP S
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G +P+ C C +AF K L H R
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRR 33
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G + PY C C + F K L H R+H EKP
Sbjct: 2 SSGSSGTG-------QRPYECIECGKAFKTKSSLICHRRSHTGEKP 40
Score = 30.6 bits (70), Expect = 0.20
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ G+ + C +C K F K L H +SH+ K
Sbjct: 3 SGSSGT----------GQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 27.5 bits (62), Expect = 2.2
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + + + C +C F K H + H G K S
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.3
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ ++C C K + K+ L H R+H
Sbjct: 11 RPYECIECGKAFKTKSSLICHRRSH 35
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 56.8 bits (138), Expect = 1e-10
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C C + F++RS LN+H ++H G +P +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 8e-10
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C C K FSR+ LN H K+H G K +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 54.1 bits (131), Expect = 9e-10
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C + F++++ LN+H ++HT KP S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C F+ +S LN H ++H G KP S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K F +S LN H + H+G E P S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTG-------EKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 18/43 (41%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K FSR+ LN H + H G KP S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F+R+ LN H + H G KP S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK F+R++ L H ++HTG K
Sbjct: 13 FKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C C + FS++S L +H KL G P
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K F+ + N H + H G KP S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F+ +S LN H + H G KP S
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C CG F ++S LN+H K+H G K +
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C C + FSR+ L H + K GP +G
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG 46
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ C C + F+ + L+ H + H EKP P
Sbjct: 2 SSGSSGTG-------EKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 31.7 bits (73), Expect = 0.063
Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE F C +C K F + LN H K H+ K
Sbjct: 2 SSGSSGT----------GEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 29.4 bits (67), Expect = 0.46
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC C K ++R++ L H + H
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLH 35
Score = 27.9 bits (63), Expect = 1.7
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F+C +C F + N H K+H G K S
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C ++F+ RS+L H IH G +P +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K FS + L H IH G K +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 51.8 bits (125), Expect = 7e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C F+ +S L H IH G KP S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F+ ++ L H IHT KP S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F +S L H H+G + P S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTG-------KKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K FS + L H H G KP S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F+ + L H H G KP S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C++CGK F+ +++L H IHTG K
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++FS +S+L H + G P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F+ + H H G KP S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F+ +S L H H G KP S
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 43.7 bits (104), Expect = 5e-06
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F +S+L H IH G K +
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AFS + L H
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33
Score = 37.5 bits (88), Expect = 6e-04
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + F+++ L+ H H +KP
Sbjct: 2 SSGSSGTG-------EKPYECNQCGKAFSVRSSLTTHQAIHTGKKP 40
Score = 29.0 bits (66), Expect = 0.57
Identities = 11/52 (21%), Positives = 16/52 (30%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C+QC K F + L H H+ K
Sbjct: 3 SGSSGT----------GEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 28.3 bits (64), Expect = 1.1
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C QC F V+ H IH G K S
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44
Score = 27.1 bits (61), Expect = 2.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++CN C K ++ ++ LT H H
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIH 35
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 56.4 bits (137), Expect = 1e-10
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G+ P++CS C +SF+ + L +H R+H +P +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G+ P+ CS C +SF+ K L +H R+HT KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 49.8 bits (120), Expect = 2e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G+ P+ CS C K FS K L H ++H K +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G+ P++C+ C F+ K L H R+H KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
GV P+ CS C K+FS K L H R H KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS+C K F+ K L H R+HT K
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G+ ++C C K F K L H R H+ E P S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTR-------EKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G Y C+ C K F+ K L H R H KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
P+ CS C +SFS K L +H ++ P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
GV + CS C K+F+ K++ H R H KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 42.5 bits (101), Expect = 9e-06
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
GV ++C C F K L +H ++H K +
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G PY CS C++ F+ K +L H R H EKP P
Sbjct: 3 SGSSGAG-------VNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G+ ++C+ C F+ K L H R H KP S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G+ P+ CS C ++FS K L H R K GP +G
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG 46
Score = 31.7 bits (73), Expect = 0.067
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
G + CSQC K+F K L H + H+ K
Sbjct: 9 GVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS 45
Score = 29.8 bits (68), Expect = 0.37
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+KC+ C K ++ K RL H R H
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 27.5 bits (62), Expect = 2.2
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + ++C QC F K H ++H K S
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G + ++CS C ++F Q+S L++H RIH G +P +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G + + CS C ++F QK+ L++H RIH KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G R ++C+ C F KS L+ H RIH G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G + + CS C K F +K L+ H +IH G K +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG + ++C C K F++KS L+ H R H G E P S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRG-------EKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + Y C+ C K F +K L+ H R H G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G + + CS C K F +K L+ H R H G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F +K+TL H RIH G K
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 47.1 bits (113), Expect = 2e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T + + CS C ++F QKS L +H ++ G P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + ++C+ C F KS L+ H R H G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R ++C CG F QKS L++H +IH G K +
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 43.3 bits (103), Expect = 6e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + + CS C K F K + H R H G KP S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
Score = 38.3 bits (90), Expect = 3e-04
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G + + CS C +AF +K L H R
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQR 33
Score = 38.3 bits (90), Expect = 4e-04
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E Y CS C + F K LS H R H EKP
Sbjct: 3 SGSSGTG-------ERHYECSECGKAFIQKSTLSMHQRIHRGEKP 40
Score = 30.2 bits (69), Expect = 0.24
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + CS+C K F+ K L+ H + H K
Sbjct: 3 SGSSGT----------GERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 27.5 bits (62), Expect = 2.7
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ ++C+ C K + +K+ L+ H R H
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIH 35
Score = 26.7 bits (60), Expect = 4.1
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + + + C +C F K + H +IH G K S
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.3 bits (137), Expect = 1e-10
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C + F + S+L H IH G +P +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 6e-10
Identities = 15/43 (34%), Positives = 17/43 (39%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F R L RH IH G K +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F SHL RH H+G E P S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTG-------EKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C + F + + L H IHT KP S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 7e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+ C F S L RH IH G KP S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F R L RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/43 (37%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F R L RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 16/29 (55%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGKVF R + L RH IHTG K
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 45.5 bits (109), Expect = 8e-07
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F++ S+L H IH G K +
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/43 (30%), Positives = 14/43 (32%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C + F + S+L H + G P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 43.6 bits (104), Expect = 4e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+ C F S L RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 40.9 bits (97), Expect = 4e-05
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C + F R HL +H
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33
Score = 38.6 bits (91), Expect = 3e-04
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C C + F L+RH H EKP P
Sbjct: 2 SSGSSGTG-------EKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.090
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + C +C K F HL RH H+ K
Sbjct: 3 SGSSGT----------GEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS 45
Score = 30.1 bits (69), Expect = 0.30
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F RH IH G K S
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.5
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC+ C K + R + L H H
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQLIH 35
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 1e-10
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C ++F+Q S L H RIH G +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K FS+ L RH +IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F+Q + L H RIHT KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C F+ S L RH RIH G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + S L RH R H+G E P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTG-------EKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K FS+ L RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F++ L RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F++ + L RH RIHTG K
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S L H +IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++FSQ S L H ++ G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F+ S L RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F+ K RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AFS+ L +H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33
Score = 38.3 bits (90), Expect = 4e-04
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + F+ +L+RH R H EKP
Sbjct: 2 SSGSSGTG-------EKPYKCNECGKAFSQTSKLARHQRIHTGEKP 40
Score = 30.2 bits (69), Expect = 0.29
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C++C K F L RH + H+ K
Sbjct: 2 SSGSSGT----------GEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.46
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F + RH +IH G K S
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 2.8
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K +++ ++L H R H
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIH 35
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.4 bits (137), Expect = 1e-10
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K F+C+ C ++FT++S L++H +IH G +P +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 1e-09
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K F C+ C K F+RK L+ H KIH G K +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 3e-09
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K F C+ C ++FT+K+ L++H +IHT KP S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + F+C C FT KS L+ H +IH G KP S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K F KS L+ H + H+G E P S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTG-------EKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + CT C K FTRK L+ H + H G KP S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K F C+ C K F+RK L+ H + H G KP S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C+ECGK FTRK+TL H +IHTG K
Sbjct: 13 FECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 3e-07
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T K C+ C ++F++KS L +H K+ G P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C+ C K FT K + H + H G KP S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C FT KS L+ H + H G KP S
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 7e-06
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C CG F +KS L++H KIH G K +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G K F C+ C +AF+RK L H +
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G + C+ C + FT K LS H + H EKP P
Sbjct: 2 SSGSSGTG-------GKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 32.5 bits (75), Expect = 0.034
Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 10/54 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ + G F C++C K F K L+ H K H+ K
Sbjct: 2 SSGSSGT----------GGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45
Score = 29.4 bits (67), Expect = 0.51
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C C K + RK+ L+ H + H
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIH 35
Score = 28.3 bits (64), Expect = 1.4
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C +C F K + H KIH G K S
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 56.0 bits (136), Expect = 1e-10
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KP++C+ C ++F +S L +H R H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 54.5 bits (132), Expect = 6e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+ G KP+ C+ C ++F K+LL +H R H +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 51.4 bits (124), Expect = 8e-09
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
+G KP+ C+ C K F K L H + H G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 49.1 bits (118), Expect = 4e-08
Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYAC 780
+G K ++C C K F+ KS L H R H+G + +
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAG-------VSGPSS 43
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
G +P++CN C F KS L H R H G+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 49.1 bits (118), Expect = 5e-08
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
G KP+ C+ C K F K L H R H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G K Y C C K F K L H R H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/41 (26%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP+ C+ C ++F KS L +H + GV+
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F K+ L H R H G+
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + ++C CG F KS L +H + H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 42.9 bits (102), Expect = 6e-06
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G K ++CN C F KS L H R H GV
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 42.5 bits (101), Expect = 9e-06
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G K + C+ C K F K H R H G+
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AF K L H R
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHER 33
Score = 38.7 bits (91), Expect = 2e-04
Identities = 13/46 (28%), Positives = 15/46 (32%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
SG E PY C+ C + F K L H R H
Sbjct: 2 SSGSSGSG-------EKPYECNECGKAFIWKSLLIVHERTHAGVSG 40
Score = 29.4 bits (67), Expect = 0.39
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + C++C K F+ K L H ++H+
Sbjct: 2 SSGSSGS----------GEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 28.7 bits (65), Expect = 0.96
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++CN C K + K+ L H RTH
Sbjct: 11 KPYECNECGKAFIWKSLLIVHERTH 35
Score = 27.1 bits (61), Expect = 2.7
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLC 153
S S K + C +C F K H + H GV
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C + + +R +L+ H R+H G + +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 54.1 bits (131), Expect = 1e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KP+ C C K + R+ DL+ H ++H G K +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C + + ++ L+ H R+HT K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C + + DL+ H R+H G K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K ++C C K + + L+ H R H+G E S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTG-------EKLSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K + R+ DL+ H R H G K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K + R+ DL+ H R H G K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK + R+ L H R+HTG K
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 7/42 (16%), Positives = 16/42 (38%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
+ KP+ C C + + ++ +L H ++ G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 44.1 bits (105), Expect = 3e-06
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG +K++ +L+ H ++H G K +
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C + + DL+ H R H G K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K + ++ + H R H G K S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C C + + R+ L H R K GP +G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG 46
Score = 38.7 bits (91), Expect = 2e-04
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E PY C C + + + L H R H EK P
Sbjct: 3 SGSSGSG-------EKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 30.6 bits (70), Expect = 0.19
Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + C +C K + + L+ H + H+ K+
Sbjct: 2 SSGSSGS----------GEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 29.0 bits (66), Expect = 0.72
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C K Y R+ L H R H
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 27.1 bits (61), Expect = 3.4
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K ++C +C + + + + H ++H G K+ S
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.9 bits (136), Expect = 2e-10
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H IH G +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 53.6 bits (130), Expect = 1e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F++ L RH IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + SHL RH H+G E P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG-------EKPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L RH IH G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 50.9 bits (123), Expect = 1e-08
Identities = 16/43 (37%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H IHT KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 48.6 bits (117), Expect = 7e-08
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 48.2 bits (116), Expect = 8e-08
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 5e-07
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L RH IHTG K
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 3e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C + F+Q S+L H + G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT RH H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 43.2 bits (103), Expect = 5e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F++ HL +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33
Score = 38.2 bits (90), Expect = 4e-04
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + FT L RH H EKP P
Sbjct: 2 SSGSSGTG-------EKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 30.9 bits (71), Expect = 0.14
Identities = 12/53 (22%), Positives = 18/53 (33%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C++C K F HL RH H+ K
Sbjct: 2 SSGSSGT----------GEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.85
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F RH IH G K S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + L H H
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIH 35
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C C +SF S L H R+H G +P +
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 52.6 bits (127), Expect = 3e-09
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP++C C +SF + L H R+H+ KP S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 52.6 bits (127), Expect = 3e-09
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F L +H ++H G K +
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C C K F S L +H R HSG E P S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSG-------EKPSGPS 44
Score = 49.9 bits (120), Expect = 3e-08
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ C C F S L +H R+H+G KP S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K+F L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 47.6 bits (114), Expect = 2e-07
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 47.2 bits (113), Expect = 3e-07
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T KP+ C C +SF S L H ++ G P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 45.6 bits (109), Expect = 7e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F + L +H R+H+G K
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C+ CG F+ S L H ++H G K +
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K+F +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C C F S L +H R H G KP S
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
Score = 39.1 bits (92), Expect = 2e-04
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C C + F L +H R H EKP
Sbjct: 2 SSGSSGTG-------EKPYNCKECGKSFRWASCLLKHQRVHSGEKP 40
Score = 38.7 bits (91), Expect = 2e-04
Identities = 10/32 (31%), Positives = 13/32 (40%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C ++F L KH R
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33
Score = 30.2 bits (69), Expect = 0.22
Identities = 11/53 (20%), Positives = 17/53 (32%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + C +C K+F L +H + HS K
Sbjct: 3 SGSSGT----------GEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS 45
Score = 28.7 bits (65), Expect = 0.93
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C++C F +H ++H G K S
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C VC +SF S+L +H RIH G +P +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 5e-09
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+VC+ F S L H RIH G KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C VC +SF + L +H RIHT KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C +C K F L H +IH G K +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C +C K F S L H R H+G E P S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTG-------EKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T KP+ C +C +SF S+L +H ++ G P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 5e-07
Identities = 15/42 (35%), Positives = 16/42 (38%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K F L H R H G KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C +C K+F L H R H G KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C C K F ++L H RIHTG K
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C VC F+ S+L +H +IH G K +
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+VC F S L H R H G KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C VC K+F H R H G KP S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 38.6 bits (91), Expect = 3e-04
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQ 809
+G E PY C +C + F L+ H R H EKP P
Sbjct: 3 SGSSGTG-------EKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 36.3 bits (85), Expect = 0.002
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C +C ++F L H R
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33
Score = 27.9 bits (63), Expect = 1.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC++C K + + LT H R H
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 27.5 bits (62), Expect = 2.7
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C+ C F H +IH G K S
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 3.4
Identities = 10/51 (19%), Positives = 15/51 (29%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C C K+F L H + H+ K
Sbjct: 3 SGSSGT----------GEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C C ++F + L H RIH G +P +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 54.4 bits (132), Expect = 7e-10
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KP++C C K F +L RH +IH G K +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ C+ C F ++L RH RIH G KP S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C ++F A L H RIHT KP S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/50 (30%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K + C C K F + L RH R H+G E P S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTG-------EKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP++C C K F +L RH R H G KP S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y+C C K F +L RH R H G KP S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C CGK F L RH RIHTG K
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C CG F + L H +IH G K +
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K ++C C K F + RH R H G KP S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP+ C C ++F + L H ++ G P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C+ C F ++L RH R H G KP S
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 40.2 bits (95), Expect = 7e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP++C C +AF L +H R
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33
Score = 38.6 bits (91), Expect = 3e-04
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
SG E PY C C + F + +L RH R H EKP
Sbjct: 2 SSGSSGSG-------EKPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40
Score = 31.7 bits (73), Expect = 0.072
Identities = 11/53 (20%), Positives = 15/53 (28%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + C C K F L RH + H+ K
Sbjct: 3 SGSSGS----------GEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45
Score = 30.2 bits (69), Expect = 0.23
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K + C+ C F + E RH +IH G K S
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 3.6
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C+ C K + L H R H
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIH 35
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 58.8 bits (141), Expect = 2e-10
Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 14/125 (11%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYIC----FTNKSDLN 223
+++ H+GI V E H + R + V + ++S
Sbjct: 12 KYLSNHKGIF---IHVTLEEL-----KRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYL 63
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMR 283
I F+C +C FS L +H++ E +K C +C K FT D H+
Sbjct: 64 YRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHVC 121
Query: 284 NHDGL 288
+
Sbjct: 122 KKHNI 126
Score = 58.0 bits (139), Expect = 3e-10
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Query: 819 DKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKS 878
D + K++L H G+ H V K+ L K + + ++S
Sbjct: 5 DVDSGSKKYLSNHKGIFIH---VTLEELKRYHQLTPEQKRLIRAIVKTL-IHNPQLLDES 60
Query: 879 DLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKK 938
+ + F+C +C FS L +H+R + +C +C + F+ D
Sbjct: 61 SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALD 118
Query: 939 HMRK 942
H+ K
Sbjct: 119 HVCK 122
Score = 50.7 bits (120), Expect = 1e-07
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 846 FKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRK 905
+S+ + + I C +C+M F++ L +H+R + +C +C K F+
Sbjct: 56 LLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTST 113
Query: 906 DDLNRHMRKHDGI 918
D H+ K I
Sbjct: 114 DSALDHVCKKHNI 126
Score = 49.5 bits (117), Expect = 3e-07
Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 2/98 (2%)
Query: 107 KWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKF 166
++H + + + + Y + + F+C +C F+ V
Sbjct: 31 RYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSL 90
Query: 167 NRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGI 204
+H+R E C VC + FT + H+ I
Sbjct: 91 KQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKKHNI 126
Score = 48.0 bits (113), Expect = 1e-06
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 11/118 (9%)
Query: 720 CGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFM-EKSHLNRHLRKHSGVVDNMEAEAPY 778
T + + H + + + + + + +L + +A + +
Sbjct: 20 IFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS----KAISQF 75
Query: 779 ACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHL-KVHDGVR 835
C +C F+ L +H+R E+ K C VC+K F H+ K H+
Sbjct: 76 VCPLCLMPFSSSVSLKQHIRYTEHTK-----VCPVCKKEFTSTDSALDHVCKKHNICV 128
Score = 46.9 bits (110), Expect = 2e-06
Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKH 765
F C C F+ +LK+H+R C +C K F H+ K
Sbjct: 75 FVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCKK 123
Score = 46.5 bits (109), Expect = 3e-06
Identities = 21/126 (16%), Positives = 42/126 (33%), Gaps = 6/126 (4%)
Query: 219 KSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDL 278
S ++ H GI + + R L K + P+ +
Sbjct: 7 DSGSKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQ-LLDESSY 62
Query: 279 NRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHL 338
+ + F C +C F+ L H+R ++K C +C + F+ + H+
Sbjct: 63 LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTKV--CPVCKKEFTSTDSALDHV 120
Query: 339 KLQHGV 344
+H +
Sbjct: 121 CKKHNI 126
Score = 38.8 bits (89), Expect = 0.001
Identities = 13/68 (19%), Positives = 21/68 (30%), Gaps = 12/68 (17%)
Query: 50 GKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWH 109
K + +F C +C ++ L H+R E + C C K F
Sbjct: 68 ASKAISQFVCPLCLMPFSSSVSLKQHIRYT------------EHTKVCPVCKKEFTSTDS 115
Query: 110 LNRHLKSH 117
H+
Sbjct: 116 ALDHVCKK 123
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C C ++F S L H RIH G +P +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F L H +IH G K +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP++C C ++F + L H RIHT KP S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ C C F + S L H RIH G KP S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C C K F+ S L H R H+G E P S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTG-------EKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 15/43 (34%), Positives = 16/43 (37%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F L H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 15/43 (34%), Positives = 15/43 (34%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F L H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F + L+ H RIHTG K
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C+ CG F S L H +IH G K +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C ++F S L H ++ G P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/43 (30%), Positives = 15/43 (34%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F + H R H G KP S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C C F + S L H R H G KP S
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 39.8 bits (94), Expect = 1e-04
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C C +AF L++H R K GP +G
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSSG 46
Score = 39.8 bits (94), Expect = 1e-04
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C C + F QL H R H EKP P
Sbjct: 2 SSGSSGTG-------EKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 29.0 bits (66), Expect = 0.65
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + CE+C F + H +IH G K S
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 1.00
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C +C K F+ L H + H+ K
Sbjct: 3 SGSSGT----------GEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.6
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C C K + ++L H R H
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIH 35
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K ++C+ C + F++ S L+ H +IH G +P +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K + C+ C K FSR L++H KIH G K +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + ++CN C F+ S L++H +IH G KP S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K + C+ C + F++ + L+ H +IHT KP S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F S L++H + H+G E P S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTG-------EKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K + C+ C K FSR L++H + H G KP S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G KRY C C K F+R L++H + H G KP S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVF+R + L +H +IHTG K
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T K + C+ C + FS+ S L H K+ G P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F + S L+ H KIH G K +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F+ + ++H + H G KP S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F+ S L++H + H G KP S
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G K + C+ C + FSR L +H +
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33
Score = 37.1 bits (87), Expect = 8e-04
Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E Y C+ C + F+ QLS+H + H EKP
Sbjct: 2 SSGSSGTG-------EKRYKCNECGKVFSRNSQLSQHQKIHTGEKP 40
Score = 29.8 bits (68), Expect = 0.35
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F + ++H KIH G K S
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.38
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F L++H K H+ K
Sbjct: 3 SGSSGT----------GEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44
Score = 28.6 bits (65), Expect = 0.84
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K++KCN C K ++R ++L+ H + H
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIH 35
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + F S L+ H RIH G +P +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F L+RH +IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C F + S L+RH RIH G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + F + L+ H RIHT KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F S+L+RH R H+G E P S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTG-------EKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F L+RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F L+RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T KP+ C+ C + F S L H ++ G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 5e-07
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVF + L RH RIHTG K
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 5e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F +RH R H G KP S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F+ S L+ H +IH G K +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 6e-06
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F + S L+RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + F LSRH R H EKP P
Sbjct: 2 SSGSSGTG-------EKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 38.6 bits (91), Expect = 3e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F +L +H R
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33
Score = 29.8 bits (68), Expect = 0.36
Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C++C K F +L+RH + H+ K
Sbjct: 2 SSGSSGT----------GEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.45
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F +RH +IH G K S
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + L+ H R H
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQRIH 35
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 55.9 bits (136), Expect = 2e-10
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KP++C+ C ++F +SNL +H R H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
G +P++CN C F KS+L H R H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 51.7 bits (125), Expect = 6e-09
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G KP+ C+ C K F+ K +L H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 50.9 bits (123), Expect = 9e-09
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+ G KP+ C+ C ++F K+ L +H R HT +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 49.0 bits (118), Expect = 5e-08
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYAC 780
TG K ++C C K F KS+L H R H+G E+ +
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTG-------ESGPSS 43
Score = 49.0 bits (118), Expect = 5e-08
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F+ KSNL +H + G +
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 48.6 bits (117), Expect = 6e-08
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
G KP+ C+ C K F+ K +L H R H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 47.1 bits (113), Expect = 3e-07
Identities = 13/41 (31%), Positives = 14/41 (34%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G K Y C C K F K +L H R H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+EC K F K+ L H R HTG
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G K ++CN C F KS+L H R H G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 43.2 bits (103), Expect = 5e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + ++C C F KSNL +H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 11/41 (26%), Positives = 13/41 (31%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G K + C+ C K F K H R H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AF+ K +L H R
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33
Score = 37.1 bits (87), Expect = 8e-04
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + F K L H R H E
Sbjct: 3 SGSSGTG-------EKPYECNECQKAFNTKSNLMVHQRTHTGESG 40
Score = 31.3 bits (72), Expect = 0.10
Identities = 10/51 (19%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C++C K F K +L H ++H+
Sbjct: 3 SGSSGT----------GEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 29.8 bits (68), Expect = 0.39
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++CN C K + K+ L H RTH
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTH 35
Score = 25.9 bits (58), Expect = 9.0
Identities = 9/41 (21%), Positives = 14/41 (34%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLC 153
S + K + C +C+ F K H + H G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G +PF+C+ C + F +RS+L HLR+H + +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G +PF C+ C + F +++ L HLR+H+ K S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G +PF C+ C K F R+ L H+++H K +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G RPF+CN C F +S L H R+H+ K S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G + F+C C K F +SHL HLR HS E S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSR-------EKSSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G +PF C+ C K F R+ L H+R H K S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C+ECGK F R++ L H+R+H+ K
Sbjct: 13 FKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 12/43 (27%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + + C C K F R+ L H+R H K S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R +C CG F ++S+L H+++H K+ +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ +P C+ C + F ++S+L HL+L
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 42.5 bits (101), Expect = 1e-05
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + F C+ C K F + H+R H K S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + +CN C F +S L H+R H K S
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
Score = 39.8 bits (94), Expect = 8e-05
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G +PF C+ C + F R+ HL H+R K GP +G
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSSG 46
Score = 38.3 bits (90), Expect = 4e-04
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E P+ C+ C + F + L+ HLR H EK P
Sbjct: 2 SSGSSGSG-------ERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 33.7 bits (78), Expect = 0.014
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE F C++C K F + HL HL+ HS K
Sbjct: 9 GERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 31.0 bits (71), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ FKCN C K + R++ L HLR H
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 28.7 bits (65), Expect = 0.80
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S + F+C +C F + H+++H K S
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 56.0 bits (136), Expect = 2e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KPF+C+ C +SF+ S L H RIH G +P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 54.0 bits (131), Expect = 9e-10
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C+ C +SF+ + L H RIHT KP S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C+ C K FS L H +IH G K +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/50 (34%), Positives = 19/50 (38%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F+C C K F S L H R H+G E P S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTG-------EKPSGPS 44
Score = 51.7 bits (125), Expect = 5e-09
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C F+ S L H RIH G KP S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C+ C K+FS L H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 8e-08
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F+ L H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C+ECGK F+ + L H RIHTG K
Sbjct: 13 FECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 13/41 (31%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C+ C +SFS S L H ++ G P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C+ C K+F+ + H R H G KP S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 5e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F+ S L H R H G KP S
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + +C CG F S L H +IH G K
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C+ C ++FS L H R K GP +G
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSSG 46
Score = 40.2 bits (95), Expect = 6e-05
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E P+ C+ C + F+I QL+ H R H EKP
Sbjct: 2 SSGSSGTG-------EKPFECAECGKSFSISSQLATHQRIHTGEKP 40
Score = 31.3 bits (72), Expect = 0.11
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 795 RHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
+ EKP + C C K+F ++ H ++H G +
Sbjct: 2 SSGSSGTGEKPFE---CAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.28
Identities = 11/52 (21%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE F C++C K+F L H + H+ K
Sbjct: 3 SGSSGT----------GEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.56
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C +C F + + H +IH G K S
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.4
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C C K ++ ++L H R H
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIH 35
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 55.6 bits (135), Expect = 2e-10
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K ++C C F+Q S+L +H +H G +P +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K + C C F+Q + L +H +H KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K + C C CFS+ L H +H G K +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + ++C C +CF+ S L H +H G KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 14/49 (28%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G K ++C C CF + S L H H G E P S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVG-------EKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C CF++ L H H G KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K + C C FS+ L H H G KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 47.2 bits (113), Expect = 3e-07
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C EC F++ ++L+ H +H G K
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
K C C FSQ S+L +H + G P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C+ C F Q S+L +H +H G K +
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C M F+ S L H H G KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 11/42 (26%), Positives = 13/42 (30%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C F+ H H G KP S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
Score = 41.4 bits (98), Expect = 2e-05
Identities = 13/48 (27%), Positives = 15/48 (31%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
G E + C CD F+ L H H EKP P
Sbjct: 3 SGSSGMG-------EKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 37.1 bits (87), Expect = 8e-04
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G K + C C FS+ L+ H K GP +G
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG 46
Score = 30.2 bits (69), Expect = 0.25
Identities = 9/37 (24%), Positives = 12/37 (32%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
GE ++ C +C F L H H K
Sbjct: 9 GEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45
Score = 28.7 bits (65), Expect = 0.97
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C +++ + L H H
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVH 35
Score = 27.9 bits (63), Expect = 1.7
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S K ++C +C F H +H G K S
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 2e-10
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C ++F Q +LN H R+H G R +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 51.8 bits (125), Expect = 6e-09
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C ++F Q LN H R+HT + S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
+G KP+ C C K F + LN+H ++H G +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 48.7 bits (117), Expect = 7e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C F LN+H R+H G + S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 48.7 bits (117), Expect = 8e-08
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K ++C C K F++ HLN+H R H+G E S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTG-------ERSSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C EC K F + L +H R+HTG +
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F + LN+H R H G + S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F + LN+H R H G + S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
+ KP+ C C ++F Q +L H ++ G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 42.1 bits (100), Expect = 1e-05
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C KTF N+H R H G + S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C+ C F Q +LN H ++H G ++ +
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C F LN+H R H G + S
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG + PY C C + F G L++H R H E+ P
Sbjct: 2 SSGSSGSG-------KKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 37.5 bits (88), Expect = 6e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C C + F + HL +H R + GP +G
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSSG 46
Score = 34.4 bits (80), Expect = 0.008
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
G+ + C +C KTF+ HLN+H + H+ +
Sbjct: 9 GKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS 45
Score = 28.7 bits (65), Expect = 0.99
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K + C++CR F N+H ++H G + S
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44
Score = 28.3 bits (64), Expect = 1.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C C K + + L H R H
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVH 35
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 2e-10
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G +P+ C+ C K F R L H+K H K +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G +P+ C+ C ++F + S+L HL+ H + +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G RP+ CN C F S L H + H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 51.4 bits (124), Expect = 9e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G +P+ C+ C KNF R L H+++H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 51.4 bits (124), Expect = 9e-09
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + Y C C K F R L H++ H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G + + C C K F SHL HL++H E S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFR-------EKSSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G +P+ C+ C ++F + + L HL+ H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
+ C+ECGK F R + L H++ H K
Sbjct: 13 YGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + + CN C F S L H+++H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 43.3 bits (103), Expect = 6e-06
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + + C+ C K F H++ H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R + C CG F + S+L H+K H K+ +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ +P+ C+ C ++F + S+L HLK
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 40.2 bits (95), Expect = 6e-05
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G +P+ C+ C + F R HL +H++ K GP +G
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG 46
Score = 36.3 bits (85), Expect = 0.002
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
SG E PY C+ C + F L HL+ H EK
Sbjct: 3 SGSSGSG-------ERPYGCNECGKNFGRHSHLIEHLKRHFREKS 40
Score = 36.0 bits (84), Expect = 0.002
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE + C++C K F HL HLK H K
Sbjct: 9 GERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 32.1 bits (74), Expect = 0.060
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
E+P C C K F + + HLK H +
Sbjct: 10 ERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 31.3 bits (72), Expect = 0.089
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 10/44 (22%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCS 98
+ + CN C K + R + L HL+ H E S S
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRH----------FREKSSGPS 44
Score = 29.8 bits (68), Expect = 0.31
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S + + C +C +F H+K H K S
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 2e-10
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G P++C C ++F+++ L H R H G +P +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G P+ C C K FSRK L H + H G K +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G P+ C C ++F++K L H R H KP S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG ++C C K F K L H R H+G E P S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAG-------EKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G P++C+ C F+ K L H R H G KP S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 17/43 (39%), Positives = 18/43 (41%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G P+ C C K FSRK L H R H G KP S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/43 (37%), Positives = 17/43 (39%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G Y C C K F+RK L H R H G KP S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 46.3 bits (111), Expect = 5e-07
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F+RK L H R H G K
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T P+ C C ++FS+K L H + G P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G ++C CG F +K L H + H G K +
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/43 (30%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + C C K F+ K + H R H G KP S
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G ++C+ C F+ K L H R H G KP S
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44
Score = 40.6 bits (96), Expect = 5e-05
Identities = 12/32 (37%), Positives = 14/32 (43%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G P+ C C +AFSRK L H R
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQR 33
Score = 37.1 bits (87), Expect = 8e-04
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C C + F+ K QL H R H EKP
Sbjct: 2 SSGSSGTG-------ENPYECHECGKAFSRKYQLISHQRTHAGEKP 40
Score = 30.2 bits (69), Expect = 0.27
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
++C+ C K ++RK +L +H RTH
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTH 35
Score = 29.8 bits (68), Expect = 0.31
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ GE + C +C K F K+ L H ++H+ K
Sbjct: 3 SGSSGT----------GENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 56.0 bits (136), Expect = 2e-10
Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHL-RIHDGIRPFQCNVCYICFTN 218
+ KP+ C C + F++ +LN H+ ++H RP +C V ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 55.7 bits (135), Expect = 3e-10
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMK-IHEGSKRYLCTMCPKCFT 273
+ KP++C C K FSR D LN H+K +H + + C + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 53.4 bits (129), Expect = 2e-09
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRK-HDGIKPFLCSMCAEAFS 931
KP++C C K FSR D LN H+++ H +P C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 53.0 bits (128), Expect = 2e-09
Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHL-RIHTNSKPHACSICTESFSQ 330
+ KP+ C C + F++ LN H+ ++HT+ +PH C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 51.8 bits (125), Expect = 8e-09
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 715 FPCSECGKVFTRKTTLKRHV-RIHTGIKEFQCWICSKCF 752
+ C CGK F+R L H+ ++HT + +C +
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 51.4 bits (124), Expect = 9e-09
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHS-RIHNGIKPFLCSMCAKCFS 245
+P+ C C F+ LN H ++H +P C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 51.0 bits (123), Expect = 1e-08
Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 8/57 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK-HSGVVDNMEAEAPYACSICDRKFT 788
+ K + C C K F HLN H+++ H+ E P+ C + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTS-------ERPHKCQVWVSGPS 52
Score = 50.7 bits (122), Expect = 2e-08
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFHCSVCFESFTQ 302
K Y+C C K F+R D LN H++ H +P C V +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 46.0 bits (110), Expect = 7e-07
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKCDE--KSFN 355
+ KP+ C C + FS+ +L H+K H P KC +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.9 bits (107), Expect = 2e-06
Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRK-HDGVKPFLCSICAKNFS 903
K + C C F+ LN H+++ H +P C + S
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 3e-06
Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMK-IHEGIKAHQCNVCMMKFTN 876
+ + CQ CG F + +LN H+K +H + H+C V + ++
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 44.1 bits (105), Expect = 3e-06
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA-HEGIKPFQCSVCSESFTQ 190
K ++C C K F+ N H++ H +P +C V +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 40.6 bits (96), Expect = 6e-05
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLK-VHDGVRDHQCQVCGNRF 846
KP C+ C K F + H+K VH R H+CQV +
Sbjct: 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 39.9 bits (94), Expect = 1e-04
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGE 950
KP++C C + FSR DHL H+++ + T E
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH---TSE 39
Score = 38.7 bits (91), Expect = 3e-04
Identities = 12/51 (23%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMK-IHDGVKVFLCSVCSKTFTD 162
S S K + C+ C F N H+K +H + C V +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRA-HENEKPEKPQTCEVCQKTF 818
PY C C + F+ L+ H++ H +E+P K C+V
Sbjct: 10 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK---CQVWVSGP 51
Score = 36.0 bits (84), Expect = 0.003
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKS-HSENKVFRCEQC 128
+ C C K F HLN H+K H+ + +C+
Sbjct: 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVW 47
Score = 32.2 bits (74), Expect = 0.068
Identities = 10/51 (19%), Positives = 16/51 (31%), Gaps = 11/51 (21%)
Query: 55 KKFKCNICPKRYARKNRLTNHL-RTHEAGSGDEKSEGGEGSFTCSQCPKTF 104
K + C C K ++R + L H+ + H E C
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHT----------SERPHKCQVWVSGP 51
Score = 26.4 bits (59), Expect = 7.0
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 419 YTCEMCEKTFKYKLPLVKHCKKQH 442
Y C+ C K F L H K+ H
Sbjct: 13 YICQSCGKGFSRPDHLNGHIKQVH 36
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 3e-10
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G+KP+ C+ C ++F+ S+L H IH G +P +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G+KP++C+ C K FS L H IH G K
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 8e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G++P+ CN C F+ S L H IH G KP S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G+KP+ C+ C ++F+ + L H IHT KP S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG+K + C C K F S L H H+G E P S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTG-------EKPSGPS 44
Score = 48.7 bits (117), Expect = 8e-08
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
GVKP++C+ C K FS L H H G KP S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y+C C K F+ L H H G KP S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F+ ++L H IHTG K
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
GV+ + C CG F S+L H IH G K +
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
GVK ++C+ C K F+ H H G KP S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 5e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++FS S+L H + G P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G+K + CN C F+ S L H H G KP S
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 38.3 bits (90), Expect = 4e-04
Identities = 13/49 (26%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G PY C+ C + F++ L+ H H EKP P
Sbjct: 2 SSGSSGTG-------VKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G+KP++C+ C +AFS L H
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33
Score = 29.0 bits (66), Expect = 0.63
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C +C F V H IH G K S
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.8
Identities = 9/53 (16%), Positives = 15/53 (28%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + G + C++C K F L H H+ K
Sbjct: 2 SSGSSGT----------GVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 2.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN C K ++ + LT H H
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIH 35
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 55.9 bits (134), Expect = 3e-10
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
C ECG + + LK+H+R HT ++ + C C+ F K +L +H++ +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 51.6 bits (123), Expect = 8e-09
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
+Y+C C + L +H+R H ++P+HC+ C SF K L H++ +SK
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 50.1 bits (119), Expect = 3e-08
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 153 CSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
C C +H+R H ++P+ C+ C+ SF + NL H++
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 49.3 bits (117), Expect = 6e-08
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 837 HQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVK 891
+ C+ CG R K+ S L H++ H ++ + C C F K +L +HM+ K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 48.9 bits (116), Expect = 8e-08
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 207 FQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
+ C C I S L +H R H ++P+ C+ C F K +L +HMK SK+
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57
Score = 47.8 bits (113), Expect = 2e-07
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 743 FQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHEN 802
+ C C + S L +H+R H+ PY C+ C+ F KG L++H+++ +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTD-------VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Query: 803 EK 804
K
Sbjct: 55 SK 56
Score = 47.4 bits (112), Expect = 3e-07
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 865 HQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
+ C C ++ S L +H+R H V+P+ C+ C +F K +L +HM+ K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 47.0 bits (111), Expect = 4e-07
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 179 FQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
+ C C + S L H+R H +RP+ C C F K +L +H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 47.0 bits (111), Expect = 4e-07
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 895 CSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYG 945
C C + L +H+R H ++P+ C+ C +F K +L KHM+
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 45.9 bits (108), Expect = 9e-07
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
C C + L +H++ H + Y CT C F K +L +HM++ K
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 45.1 bits (106), Expect = 2e-06
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 810 TCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
CE C K + K+H++ H VR + C C FK K NL HMK K
Sbjct: 3 ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 44.7 bits (105), Expect = 2e-06
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
+ C +C L +H+++H++ + + C C F F K +HMK K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 44.3 bits (104), Expect = 3e-06
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Query: 56 KFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLK 115
K+ C C R + + L H+RTH + C+ C +F K +L +H+K
Sbjct: 1 KYICEECGIRXKKPSMLKKHIRTHT----------DVRPYHCTYCNFSFKTKGNLTKHMK 50
Query: 116 SHSENK 121
S + +K
Sbjct: 51 SKAHSK 56
Score = 41.2 bits (96), Expect = 4e-05
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 291 FHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
+ C C + ++L H+R HT+ +P+ C+ C SF K NL H+K +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 41.2 bits (96), Expect = 4e-05
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 123 FRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIK 177
+ CE+C +H++ H V+ + C+ C+ +F K +HM++ K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 39.7 bits (92), Expect = 2e-04
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
Y C C + L +H+R H + +P C C +F +H+K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYH---CTYCNFSFKTKGNLTKHMKSKAH 54
Score = 30.8 bits (69), Expect = 0.24
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 713 QEFPCSECGKVFTRKTTLKRHVRIHTGIK 741
+ + C+ C F K L +H++ K
Sbjct: 28 RPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 28.1 bits (62), Expect = 2.0
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 321 CSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKCLNIVR 364
C C + S L H++ V P+ C +F+ N+ +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTK 47
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 3e-10
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KP++C+ C ++FT RSNL H +IH G +P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C FT++S+L H +IH G KP S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G KP+ C+ C K F+ + +L H KIH G K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 5e-09
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++FT ++ L H +IHT KP S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F ++S+L H + H+G E P S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTG-------EKPSGPS 44
Score = 49.0 bits (118), Expect = 6e-08
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT + +L H + H G KP S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F+ + +L H + H G KP S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F+ +SNL+ H K+ G P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 5e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK FT ++ L H +IHTG K
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FTD+ H + H G KP S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 44.0 bits (105), Expect = 3e-06
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C FT++S+L H + H G KP S
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + ++C CG F +SNL H KIH G K
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + FT + L H + H EKP P
Sbjct: 2 SSGSSGTG-------EKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 38.3 bits (90), Expect = 3e-04
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C+ C +AF+ + +L H + K GP +G
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG 46
Score = 30.6 bits (70), Expect = 0.18
Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F D+ +L H K H+ K
Sbjct: 3 SGSSGT----------GEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.8
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K +RC +C F + H KIH G K S
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44
Score = 27.1 bits (61), Expect = 3.2
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C C K + ++ L H + H
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIH 35
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 3e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ EG KP+QCS C +SF+ L H H +P +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 50.6 bits (122), Expect = 2e-08
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ +G KP+ CS C +SF+ L H HT KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ CS C K FS L +H H K +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
+G +P+QC+ C F+ L +H H KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G K +QC C K F L +H H+ E P S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTR-------EKPSGPS 44
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
+G KP+ CS C K+FS L +H H KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F+ L +H HT K
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 46.0 bits (110), Expect = 7e-07
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
EG K Y C+ C K F+ L +H H KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
EG K +QC+ C F+ L +H H KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
+G + +QC CG F L H H K +
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
+G K + CS C K+F+ + +H H KP S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 11/41 (26%), Positives = 13/41 (31%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
KP+ CS C +SFS L H P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 38.7 bits (91), Expect = 3e-04
Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
+G KP+ CS C ++FS L +H K GP +G
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG 46
Score = 37.9 bits (89), Expect = 5e-04
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
G E PY CS C + F+ +L++H H EKP P
Sbjct: 3 SGSSGEG-------EKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 29.8 bits (68), Expect = 0.36
Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 10/51 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ E GE + CS+C K+F + L +H +H+ K
Sbjct: 3 SGSSGE----------GEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 29.4 bits (67), Expect = 0.42
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C+ C K ++ RLT H TH
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITH 35
Score = 26.4 bits (59), Expect = 5.6
Identities = 9/42 (21%), Positives = 13/42 (30%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S K ++C +C F +H H K S
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.6 bits (135), Expect = 3e-10
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C+ C +SF Q+S+LN H RIH G +P +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C +SF QK+ LN H RIHT KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 19/42 (45%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ CN C F KS LNRH RIH G KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP++C+ C K F +K LNRH +IH G K +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C C K F++KSHLNRH R H+G E P S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTG-------EKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y+C C K F +K LNRH R H G KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 8e-08
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP++C+ C K+F +K LNRH R H G KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F +K+ L RH RIHTG K
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 3e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
T KP+ C+ C +SF QKS+L H ++ G P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS 45
Score = 44.0 bits (105), Expect = 4e-06
Identities = 18/42 (42%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + CN C F KS LNRH R H G KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 5e-06
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K ++C+ C K+F K NRH R H G KP S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C CG F QKS+LN H +IH G K +
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP++C+ C ++F +K HL +H R
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33
Score = 38.3 bits (90), Expect = 4e-04
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + F K L+RH R H EKP P
Sbjct: 3 SGSSGTG-------EKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 33.6 bits (78), Expect = 0.015
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K+F+ K HLNRH + H+ K
Sbjct: 3 SGSSGT----------GEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.42
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN C K + +K+ L H R H
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIH 35
Score = 28.6 bits (65), Expect = 0.90
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C +C F K NRH +IH G K S
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 3e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K + C C +SF++ L H R+H G +P +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G K + C C K FSR L +H ++H G K +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + + C C F+ L +H R+H+G KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K ++C C +SF++ L H R+H+ KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K + C C K+FSR L +H R H G KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K + C C K F L +H R HSG E P S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSG-------EKPSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F+R L +H R H G KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F+R L +H R+H+G K
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T K + C C +SFS+ L H +L G P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + C C F+ L +H R H G KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 42.5 bits (101), Expect = 9e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K++ C C K+F+ +H R H G KP S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C+ CG F + L H ++H G K +
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 40.6 bits (96), Expect = 6e-05
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G K + C C ++FSR L KH R K GP +G
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG 46
Score = 37.5 bits (88), Expect = 6e-04
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E Y C C + F+ L +H R H EKP P
Sbjct: 3 SGSSGTG-------EKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 30.2 bits (69), Expect = 0.22
Identities = 11/52 (21%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE + C +C K+F L +H + HS K
Sbjct: 2 SSGSSGT----------GEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.9
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K++ C++C F +H ++H G K S
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.1
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C C K ++R L H R H
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHERLH 35
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 3e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF C C ++F+ LN H RIH G +P +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF C C F++ LN+H RIH G KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 5e-09
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KPF C C K FS LN+H +IH G K +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 5e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C ++F+ LN H RIHT KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K F C C K F + LN+H R H+G E P S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTG-------EKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 18/42 (42%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K FS LN+H R H G KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F+ LN+H R H G KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 5e-07
Identities = 14/31 (45%), Positives = 17/31 (54%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C +CGK F+ L +H RIHTG K
Sbjct: 13 FDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K C C F++ LN+H R H G KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 2e-06
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K F+D + N+H R H G KP S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C C ++FS L H ++ G P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + C CG F LN H +IH G K +
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 39.0 bits (92), Expect = 2e-04
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C C +AFS L +H R K GP +G
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG 46
Score = 37.1 bits (87), Expect = 0.001
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ C C + F+ L++H R H EKP P
Sbjct: 3 SGSSGTG-------EKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 31.3 bits (72), Expect = 0.092
Identities = 13/52 (25%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE F C C K F D LN+H + H+ K
Sbjct: 3 SGSSGT----------GEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
Score = 29.8 bits (68), Expect = 0.38
Identities = 10/44 (22%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
+ EKP C C K F +H ++H G +
Sbjct: 3 SGSSGTGEKPFD---CIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 28.6 bits (65), Expect = 1.1
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F C C K ++ L H R H
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 27.9 bits (63), Expect = 1.6
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F C C F N+H +IH G K S
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 55.2 bits (134), Expect = 3e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G+KP+ C+ C ++F +S L IH R H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 52.9 bits (128), Expect = 2e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+ G+KP+ C+ C ++F K+ L IH R HT +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 51.3 bits (124), Expect = 7e-09
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G+KP++C+ C K F K L H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 49.8 bits (120), Expect = 2e-08
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYAC 780
TG+K + C C K F KS+L H R H+G E+ +
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTG-------ESGPSS 43
Score = 49.4 bits (119), Expect = 4e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
G+KP++C+ C K F K L H R H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 49.0 bits (118), Expect = 4e-08
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
G++P+ CN C F +KS L H+R H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G K Y+C C K F K L H R H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 46.3 bits (111), Expect = 4e-07
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F K+ L H R HTG
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 44.8 bits (107), Expect = 2e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F KS L IH + G +
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G++ + C CG F+ KS L IH + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.5 bits (101), Expect = 9e-06
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G+K + CN C F +KS L H R H G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 42.5 bits (101), Expect = 1e-05
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G+K ++C+ C K F K H R H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 40.5 bits (96), Expect = 5e-05
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G+KP++C+ C +AF K +L H R
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33
Score = 37.5 bits (88), Expect = 7e-04
Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 7/46 (15%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G PY C+ C + F K L H R H E
Sbjct: 2 SSGSSGTG-------MKPYVCNECGKAFRSKSYLIIHTRTHTGESG 40
Score = 30.5 bits (70), Expect = 0.18
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + G + C++C K F K +L H ++H+
Sbjct: 2 SSGSSGT----------GMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 29.4 bits (67), Expect = 0.54
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN C K + K+ L H RTH
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 26.3 bits (59), Expect = 5.5
Identities = 9/42 (21%), Positives = 13/42 (30%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLC 153
S + K + C +C F K H + H G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 3e-10
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+ C+ C ++F+Q+S L+ H R H G +P +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 52.1 bits (126), Expect = 4e-09
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+ CN C F+ KS L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F+QK++L+ H R HT KP S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KP+ C+ C K FS+K L+ H + H G K +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K + C C K F +KS L+ H R H+G E P S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTG-------EKPSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K FS+K L+ H R H G KP S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDE 351
+ KP+ C+ C ++FSQKS L H + G P
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F++K L+ H R H G KP S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F++K+ L H R HTG K
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 45.6 bits (109), Expect = 9e-07
Identities = 16/43 (37%), Positives = 19/43 (44%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K + CN C F+ KS L+ H R H G KP S
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 7e-06
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C KTF+ K + H R H G KP S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 9e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + + C CG F QKS L+ H + H G K +
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
Score = 38.7 bits (91), Expect = 2e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + FS+K L H R
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33
Score = 38.3 bits (90), Expect = 3e-04
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
SG E PY C+ C + F+ K LS H R H EKP
Sbjct: 3 SGSSGSG-------EKPYGCNECGKTFSQKSILSAHQRTHTGEKP 40
Score = 32.9 bits (76), Expect = 0.031
Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE + C++C KTF K L+ H ++H+ K
Sbjct: 3 SGSSGS----------GEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS 45
Score = 30.2 bits (69), Expect = 0.24
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN C K +++K+ L+ H RTH
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTH 35
Score = 28.3 bits (64), Expect = 1.2
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K + C +C F K + H + H G K S
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 55.2 bits (134), Expect = 3e-10
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C VC ++F+ ++L H R+H G +P +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C+VC F++ + L +H R+H+G KP S
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C +C K FS L +H ++H G K +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C VC ++F+ A L H R+H+ KP S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C +C K F + L +H R HSG E P S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSG-------EKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 16/42 (38%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C +C K FS L +H R H G KP S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C C K F+ +L +H R+H+G K
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C +C K F+ L +H R H G KP S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C +C ++FS ++L H ++ G P
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C+VC F++ + L +H R H G KP S
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C VC F ++L H ++H G K +
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C VC K F+ +H R H G KP S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C +C +AFS L +H R
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33
Score = 36.3 bits (85), Expect = 0.001
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C +C + F+ L++H R H EKP
Sbjct: 3 SGSSGTG-------EKPYECDVCRKAFSHHASLTQHQRVHSGEKP 40
Score = 29.0 bits (66), Expect = 0.58
Identities = 11/52 (21%), Positives = 15/52 (28%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C C K F L +H + HS K
Sbjct: 3 SGSSGT----------GEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C++C K ++ LT H R H
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVH 35
Score = 26.3 bits (59), Expect = 5.6
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K + C+ CR F +H ++H G K S
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 55.3 bits (134), Expect = 4e-10
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP +C+ C ++F +S L +H R H + +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 52.9 bits (128), Expect = 2e-09
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP C+ C ++F K+ L +H R H + K S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 49.5 bits (119), Expect = 3e-08
Identities = 12/43 (27%), Positives = 15/43 (34%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP C+ C K F K L H + H K +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P +C C F KS L H R H K S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/43 (32%), Positives = 15/43 (34%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP C+ C K F K L H R H K S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/50 (28%), Positives = 16/50 (32%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K +C C K F KS L H R H + S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVD-------DKHSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F K+ L H R H K
Sbjct: 13 CKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 47.2 bits (113), Expect = 3e-07
Identities = 14/43 (32%), Positives = 14/43 (32%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K CT C K F K L H R H K S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 44.9 bits (107), Expect = 2e-06
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP C+ C ++F KS L +H +
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 42.9 bits (102), Expect = 7e-06
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C CG F KS L +H + H K +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F KS L H R H K S
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 12/43 (27%), Positives = 14/43 (32%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K C+ C K F K + H R H K S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
Score = 39.5 bits (93), Expect = 1e-04
Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP C+ C +AF K L H R K GP +G
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG 46
Score = 38.7 bits (91), Expect = 2e-04
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P C+ C + F K QL H R H ++K P
Sbjct: 2 SSGSSGTG-------EKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 31.8 bits (73), Expect = 0.081
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE C++C K F K L H ++H ++K
Sbjct: 9 GEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 30.6 bits (70), Expect = 0.18
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K KC C K + K++L H RTH
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 28.7 bits (65), Expect = 0.99
Identities = 10/43 (23%), Positives = 15/43 (34%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K +C +C F K + H + H K S
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 54.9 bits (133), Expect = 4e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C + F R +L H +H G +P +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 51.8 bits (125), Expect = 5e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C F + DL H +H G KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F + DL H +H G K +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C + F + L H +HT KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 49.8 bits (120), Expect = 3e-08
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F+ + L H H+G E P S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTG-------EKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F + DL H H G KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/42 (35%), Positives = 16/42 (38%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F + DL H H G KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 7e-07
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F + L H +HTG K
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C + F + +LY H + G P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C F + DL H H G KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 42.9 bits (102), Expect = 8e-06
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C+ CG F + +L H +H G K +
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F + H H G KP S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 7e-04
Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 7/50 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
+G E PY C C + F + L H H EKP P +
Sbjct: 3 SGSSGTG-------EKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45
Score = 36.8 bits (86), Expect = 0.001
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KP+ C C + F + L H K GP +G
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG 46
Score = 30.2 bits (69), Expect = 0.27
Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C +C K F+ + L H H+ K
Sbjct: 2 SSGSSGT----------GEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
Score = 28.3 bits (64), Expect = 1.3
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C K + + L H H
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVH 35
Score = 28.3 bits (64), Expect = 1.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++CE+C F +R+ H +H G K S
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 55.8 bits (134), Expect = 4e-10
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 192 SNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLN 251
+ +IH G R +C+ C I F +S L+R K +C C K ++ LN
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 252 RHMKIHEGSKRY 263
+ G K
Sbjct: 57 KDEGNESGKKTS 68
Score = 54.3 bits (130), Expect = 2e-09
Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 850 SNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLN 909
+ KIH G ++ +C+ C + F +S L+R K +C C K+ ++ LN
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 910 RHMRKHDGIKPF 921
+ G K
Sbjct: 57 KDEGNESGKKTS 68
Score = 53.9 bits (129), Expect = 2e-09
Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 250 LNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIH 309
+ KIH G + C+ C F R+ L+R K C C + Q+A LN
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58
Query: 310 LRIHTNSKPHACS 322
+ K S
Sbjct: 59 EGNESGKKTSGPS 71
Score = 53.5 bits (128), Expect = 3e-09
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 7/70 (10%)
Query: 166 FNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRH 225
+ + H G + +CS C F +RS L+ + C C ++ LN+
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58
Query: 226 SRIHNGIKPF 235
+G K
Sbjct: 59 EGNESGKKTS 68
Score = 50.0 bits (119), Expect = 5e-08
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 12/77 (15%)
Query: 878 SDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLK 937
+ + H G + CS C F R+ L+R K +C C + ++ L
Sbjct: 4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALN 56
Query: 938 KHMR-----KCYGPPTG 949
K K GP +G
Sbjct: 57 KDEGNESGKKTSGPSSG 73
Score = 49.7 bits (118), Expect = 7e-08
Identities = 16/71 (22%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 137 EYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNI 196
+ KIH G + CS C F + +R K C C + Q + LN
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57
Query: 197 HLRIHDGIRPF 207
G +
Sbjct: 58 DEGNESGKKTS 68
Score = 48.5 bits (115), Expect = 2e-07
Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 14/85 (16%)
Query: 726 RKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDR 785
+ + +IH G + +C C F+ +S L+R C C +
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR--------------KTPMCEKCRK 47
Query: 786 KFTIKGQLSRHLRAHENEKPEKPQT 810
+ L++ +K P +
Sbjct: 48 DSCQEAALNKDEGNESGKKTSGPSS 72
Score = 44.7 bits (105), Expect = 4e-06
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 10/75 (13%)
Query: 791 GQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKS 850
G + + H ++ +K C C F + + R + C+ C Q++
Sbjct: 4 GSSGKRQKIHLGDRSQK---CSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEA 53
Query: 851 NLNIHMKIHEGIKAH 865
LN G K
Sbjct: 54 ALNKDEGNESGKKTS 68
Score = 43.9 bits (103), Expect = 8e-06
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
GD Q+ CS+CG +F R++TL R K C C K +++ LN+ SG
Sbjct: 15 GDRSQK--CSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKDEGNESG 64
Score = 41.2 bits (96), Expect = 6e-05
Identities = 12/70 (17%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 278 LNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIH 337
+ + H G + CS C F +++ + K C C + Q++ L
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCEKCRKDSCQEAALNKD 58
Query: 338 LKLQHGVNPF 347
+ G
Sbjct: 59 EGNESGKKTS 68
Score = 40.0 bits (93), Expect = 2e-04
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNR 168
+ K H ++ +C +C F + +R K +C C K + N+
Sbjct: 5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNK 57
Query: 169 HMRAHEGIKPF 179
G K
Sbjct: 58 DEGNESGKKTS 68
Score = 37.7 bits (87), Expect = 0.001
Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKV 150
G+ S CS+C F + S K CE+CR D + N+ G K
Sbjct: 15 GDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKT 67
Query: 151 F 151
Sbjct: 68 S 68
Score = 35.4 bits (81), Expect = 0.007
Identities = 12/54 (22%), Positives = 17/54 (31%), Gaps = 14/54 (25%)
Query: 306 LNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKC 359
+IH + CS C F ++S L K+ C KC
Sbjct: 6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTL--------------SRRKTPMCEKC 45
Score = 33.1 bits (75), Expect = 0.057
Identities = 6/31 (19%), Positives = 12/31 (38%)
Query: 713 QEFPCSECGKVFTRKTTLKRHVRIHTGIKEF 743
+ C +C K ++ L + +G K
Sbjct: 38 KTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 30.0 bits (67), Expect = 0.53
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 17/69 (24%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHL 114
+ KC+ C + R++ L+ + C +C K + LN+
Sbjct: 17 RSQKCSKCGIIFIRRSTLSRR-----------------KTPMCEKCRKDSCQEAALNKDE 59
Query: 115 KSHSENKVF 123
+ S K
Sbjct: 60 GNESGKKTS 68
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.8 bits (133), Expect = 5e-10
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP+QC+ C ++F+Q S L H R+H G +P +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 52.5 bits (127), Expect = 3e-09
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 196 IHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P+QCN C F+ S L RH R+H G KP S
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K FS+ L RH ++H G K +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 49.5 bits (119), Expect = 4e-08
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F+Q + L H R+HT KP S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K +QC C K F + S L RH R H+G E P S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG-------EKPSGPS 44
Score = 47.1 bits (113), Expect = 2e-07
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K FS+ L RH R H G KP S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F++ + L RH R+HTG K
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 46.0 bits (110), Expect = 5e-07
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F++ L RH R H G KP S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 7e-07
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 308 IHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++FSQ S L H ++ G P
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 17/43 (39%), Positives = 19/43 (44%)
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +QCN C F+ S L RH R H G KP S
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 43.3 bits (103), Expect = 6e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +QC CG F Q S L H ++H G K +
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F+ K RH R H G KP S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AFS+ L +H R
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQR 33
Score = 36.0 bits (84), Expect = 0.002
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G PY C+ C + F+ +L+RH R H EKP
Sbjct: 3 SGSSGTG-------GKPYQCNECGKAFSQTSKLARHQRVHTGEKP 40
Score = 29.4 bits (67), Expect = 0.53
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ G + C++C K F L RH + H+ K
Sbjct: 3 SGSSGT----------GGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
Score = 26.7 bits (60), Expect = 4.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++CN C K +++ ++L H R H
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVH 35
Score = 26.7 bits (60), Expect = 4.2
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F + RH ++H G K S
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 54.3 bits (131), Expect = 6e-10
Identities = 16/33 (48%), Positives = 18/33 (54%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
+R GIKPF C C + FSR D L H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 53.9 bits (130), Expect = 9e-10
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
R G+KPF C C ++FSR D L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 53.5 bits (129), Expect = 1e-09
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
R GIKPF C C +FSR DHL H +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 51.6 bits (124), Expect = 6e-09
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKH 765
R TGIK FQC C + F HL H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 46.9 bits (112), Expect = 2e-07
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
+ G K + C C + F+R D L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 45.8 bits (109), Expect = 5e-07
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
R GIKPFQC C SF++ +L +H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 41.2 bits (97), Expect = 2e-05
Identities = 12/33 (36%), Positives = 15/33 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
R GI+PFQC C F+ L H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 39.6 bits (93), Expect = 9e-05
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLK 339
R T KP C C SFS+ +L +H K
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32
Score = 39.2 bits (92), Expect = 1e-04
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
R G+KPF C C SF++ L +H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 38.9 bits (91), Expect = 2e-04
Identities = 10/33 (30%), Positives = 14/33 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKH 887
+ GIK QC C F+ L H ++H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 38.1 bits (89), Expect = 3e-04
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIH 859
+ G++ QC C F + +L +H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 37.7 bits (88), Expect = 5e-04
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 7/40 (17%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAH 800
R +G P+ C CDR F+ L+ H + H
Sbjct: 2 STRGSTG-------IKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 36.2 bits (84), Expect = 0.002
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTH 79
+K F+C C + ++R + L H + H
Sbjct: 9 IKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.8 bits (78), Expect = 0.010
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
+ G+K F C C ++F+ H + H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.9 bits (73), Expect = 0.048
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIH 737
F C +C + F+R L H + H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRH 34
Score = 31.9 bits (73), Expect = 0.055
Identities = 11/43 (25%), Positives = 13/43 (30%), Gaps = 10/43 (23%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSH 117
R G F C C ++F HL H K H
Sbjct: 2 STRGST----------GIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.0 bits (68), Expect = 0.24
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 3/36 (8%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVH 831
R KP + C C ++F + H K H
Sbjct: 2 STRGSTGIKPFQ---CPDCDRSFSRSDHLALHRKRH 34
Score = 28.1 bits (63), Expect = 1.2
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F+C C+++F R L H H
Sbjct: 12 FQCPDCDRSFSRSDHLALHRKRH 34
Score = 25.8 bits (57), Expect = 9.5
Identities = 8/33 (24%), Positives = 11/33 (33%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
+ + K F+C C F H K H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 54.5 bits (132), Expect = 6e-10
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KPF+C C + F S H R H G +P +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C + F + H R H+ KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 16/49 (32%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K F+C C K F S H R HSG E P S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSG-------EKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G KPF C C K F H + H G K +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF+C C F S H R H+G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 15/42 (35%), Positives = 15/42 (35%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C K F H R H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 46.8 bits (112), Expect = 3e-07
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F H R+H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECGK F + H R H+G K
Sbjct: 13 FKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 45.2 bits (108), Expect = 1e-06
Identities = 10/42 (23%), Positives = 13/42 (30%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
+ KP C C + F S Y H + G P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 42.9 bits (102), Expect = 9e-06
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K +C C F S H R H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C K F + H R+H G KP S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + +C+ CG F S H + H G K +
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 39.5 bits (93), Expect = 1e-04
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 7/49 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQ 809
SG E P+ C C + F Q H R+H EKP P
Sbjct: 3 SGSSGSG-------EKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 38.7 bits (91), Expect = 3e-04
Identities = 13/44 (29%), Positives = 15/44 (34%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C C + F H R K GP +G
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG 46
Score = 32.1 bits (74), Expect = 0.055
Identities = 12/53 (22%), Positives = 16/53 (30%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE F C +C K F H +SHS K
Sbjct: 2 SSGSSGS----------GEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 31.4 bits (72), Expect = 0.090
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCG 843
+ EKP K CE C K F ++ H + H G + G
Sbjct: 3 SGSSGSGEKPFK---CEECGKGFYTNSQCYSHQRSHSGEKPSGPS-SG 46
Score = 29.1 bits (66), Expect = 0.62
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K FKC C K + ++ +H R+H
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 28.3 bits (64), Expect = 1.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K F+CE+C FY + H + H G K S
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 6e-10
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C ++F SNL H IH G +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 7e-09
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F +L H IH G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C F S+L H IH G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C ++F + L H IHT KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 7e-08
Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F S+L H H+G E P S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG-------EKPSGPS 44
Score = 46.4 bits (111), Expect = 4e-07
Identities = 14/42 (33%), Positives = 15/42 (35%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F +L H H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F +L H H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 45.2 bits (108), Expect = 1e-06
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGK F + L H IHTG K
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 44.0 bits (105), Expect = 3e-06
Identities = 12/41 (29%), Positives = 17/41 (41%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C ++F SNL H + G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 6e-06
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F+ SNL H IH G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 14/42 (33%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C F S+L H H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/42 (28%), Positives = 14/42 (33%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K F H H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 37.1 bits (87), Expect = 0.001
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C+ C + F L+ H H EKP P
Sbjct: 3 SGSSGTG-------EKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C +AF +L H
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33
Score = 28.6 bits (65), Expect = 1.0
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F +L H H+ K
Sbjct: 3 SGSSGT----------GEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.4
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + LT H H
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 27.5 bits (62), Expect = 2.0
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F H IH G K S
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 7e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H IH G +P +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 6e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L RH IH G KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.4 bits (124), Expect = 8e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F++ L RH IH G K +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + SHL RH H+G E P S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTG-------EKPSGPS 44
Score = 49.0 bits (118), Expect = 5e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H IHT KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 4e-07
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L RH IHTG K
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 4e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L RH H G KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 5e-07
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L RH H G KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C + F+Q S+L H + G P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 6e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L RH H G KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H IH G K +
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 41.7 bits (99), Expect = 2e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT RH H G KP S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.5 bits (88), Expect = 6e-04
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F++ HL +H
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33
Score = 35.9 bits (84), Expect = 0.003
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G + PY C+ C + FT L+RH H EKP
Sbjct: 3 SGSSGTG-------KKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40
Score = 31.7 bits (73), Expect = 0.082
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
G+ + C++C K F HL RH H+ K
Sbjct: 9 GKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.9 bits (63), Expect = 1.5
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F RH IH G K S
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + L H H
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIH 35
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 54.5 bits (132), Expect = 7e-10
Identities = 16/43 (37%), Positives = 18/43 (41%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ K C C FT K+ LN H RIHT KP S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 53.7 bits (130), Expect = 1e-09
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ K QC C FT +S+LN H RIH G +P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 51.8 bits (125), Expect = 6e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
+ QC+ C FT KS LN+H RIH G KP S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+ K C C + F+ K LN+H +IH G K +
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 51.0 bits (123), Expect = 1e-08
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+ K QC C + F KSHLN+H R H+G E P S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTG-------EKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
K C C + F+ K LN+H R H G KP S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
+K + C C + FT K LN+H R H G KP S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 47.2 bits (113), Expect = 2e-07
Identities = 18/42 (42%), Positives = 21/42 (50%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
K+HQC+ C FT KS LN+H R H G KP S
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECG+ FT K+ L +H RIHTG K
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 44.1 bits (105), Expect = 3e-06
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
+ HQC CG F KS+LN H +IH G K
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
K C C + FT K N+H R H G KP S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
K C C F+ K HL +H R K GP +G
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG 46
Score = 42.1 bits (100), Expect = 1e-05
Identities = 11/41 (26%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+++K H C C F+ KS+L H ++ G P
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 3e-05
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
S + C C R FT+K L++H R H EKP P +
Sbjct: 2 SSGSSGSS-------TKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS 45
Score = 31.7 bits (73), Expect = 0.082
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSH 117
S C +C + F K HLN+H + H
Sbjct: 9 STKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 31.0 bits (71), Expect = 0.12
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K +C +C F +K N+H +IH G K S
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44
Score = 29.4 bits (67), Expect = 0.50
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +C+ C + + K+ L H R H
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 26.0 bits (58), Expect = 9.5
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
+C C + F K L++H +H TG
Sbjct: 13 HQCHECGRGFTLKSHLNQHQRIH--TG 37
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.4 bits (132), Expect = 7e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H IH G +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.7 bits (125), Expect = 5e-09
Identities = 17/42 (40%), Positives = 20/42 (47%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L RH IH G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 51.3 bits (124), Expect = 9e-09
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F++ L RH IH G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + SHL RH H+G E P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTG-------EKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H IHT KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.7 bits (112), Expect = 3e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 46.3 bits (111), Expect = 4e-07
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L RH IHTG K
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 5e-07
Identities = 16/42 (38%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 43.6 bits (104), Expect = 4e-06
Identities = 12/41 (29%), Positives = 18/41 (43%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C + F+Q S+L H + G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 5e-06
Identities = 16/42 (38%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT RH H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 1e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H IH G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 37.9 bits (89), Expect = 5e-04
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F++ HL +H
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRG 33
Score = 36.3 bits (85), Expect = 0.002
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + FT L+RH H EKP
Sbjct: 3 SGSSGTG-------EKPYKCNECGKVFTQNSHLARHRGIHTGEKP 40
Score = 31.3 bits (72), Expect = 0.10
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F HL RH H+ K
Sbjct: 3 SGSSGT----------GEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
Score = 28.2 bits (64), Expect = 1.4
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + L H H
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIH 35
Score = 27.5 bits (62), Expect = 2.1
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F RH IH G K S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 54.1 bits (131), Expect = 7e-10
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
G KPF CS C ++F+ +S L +H + H +P +
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 51.4 bits (124), Expect = 8e-09
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
G KPF CS C ++F+ K+ L +H + H KP S
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 48.7 bits (117), Expect = 7e-08
Identities = 16/41 (39%), Positives = 19/41 (46%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
S +G KPF CS C K FS K L H + H K +
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 48.3 bits (116), Expect = 9e-08
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PF C+ C F++KS L H + H KP S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 48.3 bits (116), Expect = 1e-07
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF CS C K FS K L H + H KP S
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 47.1 bits (113), Expect = 2e-07
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K F C C K F KS+L H + H+ E P S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAE-------EKPSGPS 42
Score = 47.1 bits (113), Expect = 2e-07
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F CS C K F+ K+ L H + H K
Sbjct: 11 FGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 46.0 bits (110), Expect = 6e-07
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C+ C K F+ K L H + H KP S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 43.7 bits (104), Expect = 4e-06
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP CS C ++FS KS L +H + P
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 42.5 bits (101), Expect = 9e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 857 KIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K C+ C F++KS L H + H KP S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F CS C K F+ K H + H KP S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 41.4 bits (98), Expect = 3e-05
Identities = 10/40 (25%), Positives = 14/40 (35%)
Query: 829 KVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + C C F KS L +H + H K +
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
Score = 39.1 bits (92), Expect = 2e-04
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
E P+ CS C++ F+ K L H + H EKP P +
Sbjct: 8 EKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 915 HDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF CS C +AFS K +L H + K GP +G
Sbjct: 5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG 44
Score = 32.5 bits (75), Expect = 0.037
Identities = 14/35 (40%), Positives = 18/35 (51%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE F CS C K F K +L H ++H+E K
Sbjct: 7 GEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 31.7 bits (73), Expect = 0.071
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F C+ C K ++ K+ L H +TH
Sbjct: 9 KPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 26.0 bits (58), Expect = 7.3
Identities = 11/40 (27%), Positives = 12/40 (30%)
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S K F C C F K H + H K S
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 54.1 bits (131), Expect = 9e-10
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
+ G KP++C C F Q ++L H+ IH G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 49.8 bits (120), Expect = 3e-08
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ G KP+ C C F Q A L H+ IHT S P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41
Score = 49.4 bits (119), Expect = 3e-08
Identities = 13/39 (33%), Positives = 16/39 (41%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
S G KP+ C C F + L H+ IH GS
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 48.3 bits (116), Expect = 8e-08
Identities = 11/47 (23%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYA 779
G K ++C C F++ +HL H+ H+G P +
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG-------SGPSS 41
Score = 46.7 bits (112), Expect = 3e-07
Identities = 11/39 (28%), Positives = 14/39 (35%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
G KP+ C C F + L H+ H G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
G +P++C C F + L H IH G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIK 741
C CG F + L+ HV IHTG
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSG 38
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
G K Y C C F + L H+ H G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 43.3 bits (103), Expect = 6e-06
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C F + HL+ H+
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32
Score = 41.7 bits (99), Expect = 2e-05
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
G + ++C+ CG RF Q ++L H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
Score = 41.0 bits (97), Expect = 3e-05
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
G K ++C C +F + L H+ H G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 39.8 bits (94), Expect = 8e-05
Identities = 11/45 (24%), Positives = 13/45 (28%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
G E PY C C +F L H+ H P
Sbjct: 2 SSGSSGG-------EKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39
Score = 39.4 bits (93), Expect = 1e-04
Identities = 9/39 (23%), Positives = 11/39 (28%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
G K + C C F H+ H G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 38.3 bits (90), Expect = 3e-04
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIH 337
KP+ C C F Q ++L H
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAH 30
Score = 32.9 bits (76), Expect = 0.027
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
+ EKP K CE C F ++A + H+ +H G
Sbjct: 2 SSGSSGGEKPYK---CETCGARFVQVAHLRAHVLIHTG 36
Score = 31.3 bits (72), Expect = 0.093
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C R+ + L H+ H
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIH 34
Score = 30.6 bits (70), Expect = 0.15
Identities = 11/43 (25%), Positives = 14/43 (32%), Gaps = 10/43 (23%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSH 117
+ GGE + C C FV HL H+ H
Sbjct: 2 SSGSS----------GGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 27.1 bits (61), Expect = 2.8
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
S K ++CE C F H+ IH G
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 54.1 bits (131), Expect = 9e-10
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C+ C + FTQ S+L H R+H G +P +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 51.0 bits (123), Expect = 9e-09
Identities = 17/42 (40%), Positives = 21/42 (50%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++CN C FT S L RH R+H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 50.6 bits (122), Expect = 1e-08
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C+ C K F++ L RH ++H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 49.4 bits (119), Expect = 3e-08
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + SHL RH R H+G P S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTG-------GKPSGPS 44
Score = 49.4 bits (119), Expect = 4e-08
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C+ C + FTQ + L H R+HT KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 47.1 bits (113), Expect = 3e-07
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C+ECGKVFT+ + L RH R+HTG K
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 47.1 bits (113), Expect = 3e-07
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C+ C K F++ L RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 17/42 (40%), Positives = 18/42 (42%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K FT+ L RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 43.7 bits (104), Expect = 5e-06
Identities = 17/42 (40%), Positives = 19/42 (45%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++CN C FT S L RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 43.7 bits (104), Expect = 5e-06
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C+ C + F+Q S+L H ++ G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 42.1 bits (100), Expect = 2e-05
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F Q S+L H ++H G K +
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 15/42 (35%), Positives = 17/42 (40%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C+ C K FT RH R H G KP S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 37.9 bits (89), Expect = 4e-04
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C + F++ HL +H R
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRR 33
Score = 36.0 bits (84), Expect = 0.002
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C+ C + FT L+RH R H KP
Sbjct: 3 SGSSGTG-------EKPYKCNECGKVFTQNSHLARHRRVHTGGKP 40
Score = 31.0 bits (71), Expect = 0.14
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 10/52 (19%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ GE + C++C K F HL RH + H+ K
Sbjct: 3 SGSSGT----------GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
Score = 28.3 bits (64), Expect = 1.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KCN C K + + + L H R H
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVH 35
Score = 27.1 bits (61), Expect = 3.4
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F RH ++H G K S
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 54.1 bits (131), Expect = 9e-10
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G + +CS C + F Q SN H RIH G +P +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 53.3 bits (129), Expect = 2e-09
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G + CS C + F Q + H RIHT KP S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 49.1 bits (118), Expect = 5e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G R +C+ C F S+ +H RIH G KP S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G + CS C K F + + +H +IH G K +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 47.9 bits (115), Expect = 1e-07
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
G + +C C K F++ S+ +H R H+G E P S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTG-------EKPSGPS 44
Score = 46.8 bits (112), Expect = 4e-07
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G + CS C K F + + +H R H G KP S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 44.8 bits (107), Expect = 1e-06
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CS+CGK F + + +H RIHTG K
Sbjct: 13 HRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 44.5 bits (106), Expect = 2e-06
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G + + C+ C K F + + +H R H G KP S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ H CS C + F Q SN H ++ G P
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 1e-05
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G + H+C+ C F S+ +H R H G KP S
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 42.5 bits (101), Expect = 1e-05
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G + CS C K F F +H R H G KP S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 42.1 bits (100), Expect = 2e-05
Identities = 15/43 (34%), Positives = 18/43 (41%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G R H+C CG F Q SN H +IH G K +
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 39.4 bits (93), Expect = 1e-04
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G + CS C + F + + +H R K GP +G
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSSG 46
Score = 37.9 bits (89), Expect = 5e-04
Identities = 13/49 (26%), Positives = 16/49 (32%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
G E + CS C + F +H R H EKP P
Sbjct: 2 SSGSSGHG-------ERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 27.9 bits (63), Expect = 1.9
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + RC C F + +H +IH G K S
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
Score = 27.5 bits (62), Expect = 2.3
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ +C+ C K + + + H R H
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 27.5 bits (62), Expect = 2.5
Identities = 10/52 (19%), Positives = 17/52 (32%), Gaps = 10/52 (19%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
+ + GE CS C K F+ + +H + H+ K
Sbjct: 2 SSGSSGH----------GERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
+ G KP+ C +C F L HLRIH G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 51.0 bits (123), Expect = 9e-09
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ G KP+ C +C F L HLRIHT S P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41
Score = 50.2 bits (121), Expect = 2e-08
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
S G KP+ C +C F L H++IH GS
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 49.0 bits (118), Expect = 5e-08
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
G KP+ C IC F L H+R H G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
+PC CG F TLK H+RIHTG
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 46.0 bits (110), Expect = 5e-07
Identities = 13/47 (27%), Positives = 16/47 (34%), Gaps = 7/47 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYA 779
G K + C IC F L HLR H+G P +
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG-------SGPSS 41
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
G + + C++CG RF+ L H++IH G
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38
Score = 43.6 bits (104), Expect = 4e-06
Identities = 12/39 (30%), Positives = 14/39 (35%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
G K Y C +C F L H+R H G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
G +P+ C +C F + L H RIH G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 42.1 bits (100), Expect = 1e-05
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C +C F LK H+R
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLR 32
Score = 41.3 bits (98), Expect = 3e-05
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
G K + C +C F H+R H G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 40.6 bits (96), Expect = 5e-05
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
G K + C +C +F + L H+R H G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 39.4 bits (93), Expect = 1e-04
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
G E PY C IC +F L HLR H P
Sbjct: 2 SSGSSGG-------EKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39
Score = 39.0 bits (92), Expect = 2e-04
Identities = 9/30 (30%), Positives = 10/30 (33%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHL 338
KP+ C IC F L HL
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHL 31
Score = 32.5 bits (75), Expect = 0.040
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C IC R+ L +HLR H
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 31.7 bits (73), Expect = 0.065
Identities = 10/43 (23%), Positives = 13/43 (30%), Gaps = 10/43 (23%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSH 117
+ GGE + C C F L HL+ H
Sbjct: 2 SSGSS----------GGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 27.5 bits (62), Expect = 2.0
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVHGITG 515
+ C +C F QTL H+ +H TG
Sbjct: 12 YPCEICGTRFRHLQTLKSHLRIH--TG 36
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 1e-09
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G KPFQC C +F+ +L HLR H+ P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 49.5 bits (119), Expect = 4e-08
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KPF C C +F+ L HLR H + P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 48.4 bits (116), Expect = 1e-07
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KPF C C NFS L +H+R H+ P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 48.0 bits (115), Expect = 1e-07
Identities = 12/41 (29%), Positives = 16/41 (39%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G KPF C C FS L +H++ HE +
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K FQC C F L +HLR H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHER-------TDPSGPS 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C F+ L +H+R+H+ P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 45.7 bits (109), Expect = 7e-07
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +PFQC C + F+ L +H R H P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 44.9 bits (107), Expect = 2e-06
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
F C ECG F+ +L +H+R H
Sbjct: 13 FQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 44.9 bits (107), Expect = 2e-06
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K QC C M F+ L +H+R H+ P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 43.0 bits (102), Expect = 9e-06
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K F C C F+ +H+R+HE P S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 41.0 bits (97), Expect = 3e-05
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G KPF C C FS L KH+R GP +G
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSSG 46
Score = 40.3 bits (95), Expect = 7e-05
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ C C F+ L +HLR+HE P P
Sbjct: 3 SGSSGTG-------EKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 39.9 bits (94), Expect = 9e-05
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
T KP C C +FS +L+ HL+ +P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 39.5 bits (93), Expect = 1e-04
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + QC+ CG F +L H++ HE
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 31.8 bits (73), Expect = 0.062
Identities = 11/53 (20%), Positives = 15/53 (28%), Gaps = 10/53 (18%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQ 127
+ GE F C +C F L +HL+SH
Sbjct: 3 SGSSGT----------GEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 31.0 bits (71), Expect = 0.15
Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
+ EKP + C+ C F +HL+ H+
Sbjct: 3 SGSSGTGEKPFQ---CKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 29.5 bits (67), Expect = 0.49
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F+C C ++ L HLR+H
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 28.7 bits (65), Expect = 0.82
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K F+C++C +F +H++ H+ S
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 53.7 bits (130), Expect = 1e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G KP++C C ++F S+ H R+H G RP +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 50.3 bits (121), Expect = 2e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G +P++C C F + S +H R+H G +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 49.9 bits (120), Expect = 2e-08
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
G KP+ C C K F +H ++H G + +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 48.7 bits (117), Expect = 6e-08
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
TG K ++C C K F + S +H R H+G + P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTG-------QRPSGPS 44
Score = 48.3 bits (116), Expect = 1e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G KP+ C C ++F + H R+HT +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 46.8 bits (112), Expect = 4e-07
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G KP+ C C K F +H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 45.6 bits (109), Expect = 7e-07
Identities = 13/42 (30%), Positives = 15/42 (35%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K Y C C K F +H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 45.3 bits (108), Expect = 1e-06
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F ++ +H R+HTG +
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 44.9 bits (107), Expect = 2e-06
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T KP+ C C ++F S+ H +L G P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 43.0 bits (102), Expect = 9e-06
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K ++C C F + S +H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 42.6 bits (101), Expect = 1e-05
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + ++C CG F S+ H ++H G + +
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 42.2 bits (100), Expect = 2e-05
Identities = 13/42 (30%), Positives = 16/42 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K + C C K F D +H R H G +P S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 37.2 bits (87), Expect = 9e-04
Identities = 9/31 (29%), Positives = 12/31 (38%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C +AF +H R
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33
Score = 36.0 bits (84), Expect = 0.002
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E PY C C + F ++H R H ++P P
Sbjct: 3 SGSSGTG-------EKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 31.0 bits (71), Expect = 0.14
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
+ EKP K C C K F + +H ++H G R
Sbjct: 3 SGSSGTGEKPYK---CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 29.9 bits (68), Expect = 0.35
Identities = 9/53 (16%), Positives = 17/53 (32%), Gaps = 10/53 (18%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + GE + C +C K F D +H + H+ +
Sbjct: 2 SSGSSGT----------GEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 27.9 bits (63), Expect = 1.4
Identities = 9/42 (21%), Positives = 17/42 (40%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S + K ++C +C F +H ++H G + S
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44
Score = 27.2 bits (61), Expect = 2.8
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K +KC C K + + T H R H
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQRLH 35
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 53.7 bits (130), Expect = 1e-09
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
+ G KP++C C ++F+Q+ +L +H+R+H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 52.2 bits (126), Expect = 3e-09
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ G KP+ C C ++F+QK L +H+R+HT S P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41
Score = 51.4 bits (124), Expect = 6e-09
Identities = 15/39 (38%), Positives = 20/39 (51%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
S G KP+ C C K FS+K L H+++H GS
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 48.3 bits (116), Expect = 8e-08
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
G +P++C+ C F+ K L H R+H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 47.9 bits (115), Expect = 1e-07
Identities = 15/39 (38%), Positives = 18/39 (46%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
G KP+ C C K FS+K L H+R H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 47.6 bits (114), Expect = 2e-07
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 7/47 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYA 779
G K ++C C K F +K L H+R H+G P +
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTG-------SGPSS 41
Score = 45.6 bits (109), Expect = 9e-07
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
G K Y C C K F++K L H+R H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 44.1 bits (105), Expect = 2e-06
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPF 347
KP+ C C ++FSQK +L +H+++ G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 42.6 bits (101), Expect = 9e-06
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIK 741
C +CGK F++K +L H+R+HTG
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 42.2 bits (100), Expect = 1e-05
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
G K ++C+ C F+ K L H+R H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 41.4 bits (98), Expect = 2e-05
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
G + ++C CG F QK +L +H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
Score = 41.0 bits (97), Expect = 4e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C C +AFS+K L H+R
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32
Score = 40.2 bits (95), Expect = 6e-05
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
G K + C C K F+ K H+R H G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
G E PY C C + F+ KG L H+R H P
Sbjct: 2 SSGSSGG-------EKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39
Score = 31.4 bits (72), Expect = 0.098
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSH 117
+ GGE + C QC K F K L H++ H
Sbjct: 2 SSGSS----------GGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 28.7 bits (65), Expect = 0.92
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K ++C+ C K +++K L H+R H
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 26.4 bits (59), Expect = 5.5
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
S K +RC+QC F K H+++H G
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 53.1 bits (128), Expect = 2e-09
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
+ G P+ C C +SFTQR +L +H R P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 50.7 bits (122), Expect = 1e-08
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ G P+ C C +SFTQ+ L +H R + S P +
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 46.5 bits (111), Expect = 4e-07
Identities = 11/37 (29%), Positives = 16/37 (43%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
S G P+LC C K F+++ L H + S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 44.6 bits (106), Expect = 2e-06
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
G P+LC C K+F+++ L H R P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 44.2 bits (105), Expect = 3e-06
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
G P+ C C FT + L H R + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 43.8 bits (104), Expect = 3e-06
Identities = 12/39 (30%), Positives = 15/39 (38%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
G YLC C K FT++ L H R+ P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 43.0 bits (102), Expect = 7e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
+ C +CGK FT++ +L H R +
Sbjct: 12 YLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 41.1 bits (97), Expect = 3e-05
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
G E PY C C + FT +G L+ H R+ P
Sbjct: 2 SSGSSGG-------ETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39
Score = 40.0 bits (94), Expect = 8e-05
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
G + C CG F Q+ +L +H +
Sbjct: 6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 39.2 bits (92), Expect = 1e-04
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYG 945
G P+LC C ++F+++ L H R C
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 38.8 bits (91), Expect = 2e-04
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
G +LC C K+FT + H R+ P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 38.4 bits (90), Expect = 2e-04
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
G + C C K F ++ L H R S
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQ 36
Score = 38.4 bits (90), Expect = 3e-04
Identities = 9/39 (23%), Positives = 11/39 (28%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
G + C C FT + L H R P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 37.3 bits (87), Expect = 8e-04
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIH 337
P+ C C +SF+Q+ +L +H
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVH 30
Score = 36.9 bits (86), Expect = 0.001
Identities = 14/38 (36%), Positives = 20/38 (52%)
Query: 84 GDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENK 121
G S GGE + C QC K+F + L H +S S++
Sbjct: 1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG 38
Score = 26.9 bits (60), Expect = 4.1
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ C C K + ++ L H R+
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSC 34
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 58.7 bits (141), Expect = 9e-09
Identities = 22/200 (11%), Positives = 53/200 (26%), Gaps = 3/200 (1%)
Query: 570 PKQEPDSIVKEEMLSDYDDNDNSMMTATQDDDDEPFQSEVENDDDDVPLSKRTSYYASSA 629
P++ + S +D S + ++ + + R +
Sbjct: 5 PRKTKGKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQR 64
Query: 630 DEERPAPKKRGRKKGVPTRRKSTGSRKSAKSDVDTTDYESAMDTDYVDDNEASESRNEDS 689
E + +G P ++ +T + + + A D +++
Sbjct: 65 ATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSD 124
Query: 690 GVEGKENEDGRRKRGKRKKGDTPQE---FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCW 746
NE R + G + + ++ + +QC
Sbjct: 125 TGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCH 184
Query: 747 ICSKCFMEKSHLNRHLRKHS 766
+CS L+ H+ H
Sbjct: 185 VCSAVLFSPLDLDAHVASHG 204
Score = 51.4 bits (122), Expect = 2e-06
Identities = 20/207 (9%), Positives = 53/207 (25%), Gaps = 10/207 (4%)
Query: 531 QVNASETSGDLNTSLAPSDGTIPEIDINKSDTGNMYIVTPKQEPDSIVKEEMLSDYDDND 590
+ + +++ DG+ D + G + ++
Sbjct: 7 KTKGKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTEPGTSNREQYRARPGIASVQRAT 66
Query: 591 NSMMTATQDDDDEPFQSEVENDDDDVPLSKRTSYYASSADEERPAPKKRGRKKGVPTRRK 650
S +++D+ + D V A A +++ + + + +
Sbjct: 67 ESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTG 126
Query: 651 STGSRKSAKSDVDTTDYESAMDTDYVDDNEASESRNEDSGVEGKENEDGRRKRGKRKKGD 710
+ + ++S +D + + + + G
Sbjct: 127 INNANELSRS--------GNVDNE--GGSNQKPMSTRIAEATSAIVSKHPARVGLPPTAS 176
Query: 711 TPQEFPCSECGKVFTRKTTLKRHVRIH 737
+ + C C V L HV H
Sbjct: 177 SGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 46.0 bits (108), Expect = 7e-05
Identities = 32/209 (15%), Positives = 60/209 (28%), Gaps = 20/209 (9%)
Query: 595 TATQDDDDEPFQSEVENDDDDVPLSKRTSYYASSADEERPAPKKRGRKKGVPTRRKSTGS 654
++ + +D +DD L + + A A E P R + + P +
Sbjct: 12 SSGKGNDSTE-----RSDDGSSQLRDKQNNKAGPATTE-PGTSNREQYRARPGIASVQRA 65
Query: 655 RKSAKSDVDTTDYESAMD--TDYVD-DNEASESRNEDSGVEGKENEDGRRKRGKRKKGDT 711
+SA+ + D + D NE SE+++E K+ +D K K T
Sbjct: 66 TESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTD----KSKAQVT 121
Query: 712 PQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDN 771
+ + ++ + S + S
Sbjct: 122 YSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASS---- 177
Query: 772 MEAEAPYACSICDRKFTIKGQLSRHLRAH 800
Y C +C L H+ +H
Sbjct: 178 ---GHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 44.5 bits (104), Expect = 2e-04
Identities = 11/56 (19%), Positives = 16/56 (28%)
Query: 804 KPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIH 859
KP + E K +QC VC +L+ H+ H
Sbjct: 148 KPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 42.9 bits (100), Expect = 7e-04
Identities = 8/50 (16%), Positives = 15/50 (30%)
Query: 838 QCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKH 887
+ + +QC+VC + DL+ H+ H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 41.0 bits (95), Expect = 0.002
Identities = 9/54 (16%), Positives = 16/54 (29%)
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
+ + S + +QC VCS +L+ H+ H
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 40.6 bits (94), Expect = 0.003
Identities = 9/53 (16%), Positives = 15/53 (28%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
S ++ +QC+VC + DL+ H H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 38.7 bits (89), Expect = 0.012
Identities = 6/42 (14%), Positives = 12/42 (28%)
Query: 874 FTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
+ + C +C+ DL+ H+ H
Sbjct: 162 VSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 37.5 bits (86), Expect = 0.031
Identities = 8/54 (14%), Positives = 16/54 (29%), Gaps = 5/54 (9%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKW 108
++C++C L H+ +H S + F+ W
Sbjct: 179 HGYQCHVCSAVLFSPLDLDAHVASHGLH-----GNMTLTSSEIQRHITEFISSW 227
Score = 37.1 bits (85), Expect = 0.039
Identities = 12/76 (15%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Query: 217 TNKSDLNRHSRIHNG-------IKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCP 269
N ++L+R + N + + + S+ Y C +C
Sbjct: 128 NNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCS 187
Query: 270 KCFTRKDDLNRHMRNH 285
DL+ H+ +H
Sbjct: 188 AVLFSPLDLDAHVASH 203
Score = 36.0 bits (82), Expect = 0.084
Identities = 19/136 (13%), Positives = 33/136 (24%), Gaps = 18/136 (13%)
Query: 381 ASEETKKDKPGAASLGNKRGKAAASQKKETGKGKAKTVYTCEMCEKTFKYKLPLVKHCKK 440
E + K A K+ K K + L +
Sbjct: 91 LVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDT-----------GINNANELSRSGNV 139
Query: 441 QHQVDLEMSESEDENKASVNTAKVKKESVEGVSMEGKSLSEFSGPVGNFKCALCEKTFVR 500
++ + + K + G+ S ++C +C
Sbjct: 140 DNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGH-------GYQCHVCSAVLFS 192
Query: 501 KQTLDRHVTVHGITGA 516
LD HV HG+ G
Sbjct: 193 PLDLDAHVASHGLHGN 208
Score = 34.8 bits (79), Expect = 0.17
Identities = 6/56 (10%), Positives = 15/56 (26%), Gaps = 1/56 (1%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGV 344
++ ++ + C +C+ +L H HG+
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAH-VASHGL 205
Score = 34.4 bits (78), Expect = 0.23
Identities = 18/139 (12%), Positives = 42/139 (30%), Gaps = 7/139 (5%)
Query: 12 DANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNR 71
++ E K+ ++ ++ + D + DE + K+ K K +
Sbjct: 67 ESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQ--KQAKDTDKSKAQVTYSD 124
Query: 72 LTNHLRTHEAGSGDEKSEGG-----EGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
+ + SG+ +EGG + + S ++C
Sbjct: 125 TGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCH 184
Query: 127 QCRFDFYVKREYNRHMKIH 145
C + + + H+ H
Sbjct: 185 VCSAVLFSPLDLDAHVASH 203
Score = 33.7 bits (76), Expect = 0.43
Identities = 6/42 (14%), Positives = 13/42 (30%)
Query: 216 FTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
+ + + C +C+ DL+ H+ H
Sbjct: 162 VSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 33.3 bits (75), Expect = 0.53
Identities = 5/52 (9%), Positives = 13/52 (25%)
Query: 890 VKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
+ + + S+ + C +C+ L H+
Sbjct: 150 MSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVA 201
Score = 32.9 bits (74), Expect = 0.78
Identities = 6/49 (12%), Positives = 11/49 (22%)
Query: 265 CTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIH 313
++ + C VC L+ H+ H
Sbjct: 155 AEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.7 bits (71), Expect = 1.4
Identities = 7/58 (12%), Positives = 13/58 (22%)
Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
+ E + C VCS + + H+ +H
Sbjct: 146 NQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203
Score = 31.4 bits (70), Expect = 2.0
Identities = 12/107 (11%), Positives = 32/107 (29%), Gaps = 10/107 (9%)
Query: 13 ANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYARKNRL 72
++ K ++ ++ ++++ ++E S +K + ++
Sbjct: 109 QAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPAR 168
Query: 73 TNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSE 119
T +G + C C L+ H+ SH
Sbjct: 169 VGLPPTASSGH----------GYQCHVCSAVLFSPLDLDAHVASHGL 205
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 51.0 bits (123), Expect = 1e-08
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLR-IHDGIRPFQCN 210
+ G KP++C C ++F Q ++L H R H G +P +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 47.9 bits (115), Expect = 1e-07
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRK-HSGVVDNMEAEAPYACS 781
TG K ++C C K F++ + L RH R H+G E P S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTG-------EKPSGPS 45
Score = 47.6 bits (114), Expect = 2e-07
Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHM-KIHEGSKRYLCT 266
G KP+ C C K F + L RH H G K +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 47.2 bits (113), Expect = 2e-07
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSR-IHNGIKPFLCS 238
G +P++C C F + L RH R H G KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 47.2 bits (113), Expect = 2e-07
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLR-IHTNSKPHACS 322
+ G KP+ C C ++F Q L H R HT KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 46.4 bits (111), Expect = 4e-07
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQH-GVNPFKC 349
T KP+ C C ++F Q ++L H + H G P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 46.0 bits (110), Expect = 6e-07
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRK-HDGIKPFLCS 924
G KP+ C C K F + L RH R H G KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 46.0 bits (110), Expect = 7e-07
Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLKPFHCS 294
G K Y C C K F + L RH R H G KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 43.3 bits (103), Expect = 5e-06
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 717 CSECGKVFTRKTTLKRHVR-IHTGIKEFQC 745
C ECGK F + T+L RH R HTG K
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 41.0 bits (97), Expect = 4e-05
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRK-HDGVKPFLCS 896
G K ++C C F + L RH R H G KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 39.9 bits (94), Expect = 9e-05
Identities = 14/43 (32%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRA-HEGIKPFQCS 182
G K + C C K F RH R H G KP S
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 39.9 bits (94), Expect = 1e-04
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCYGPPTGE 950
G KP+ C C +AF + L +H R + TGE
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH---TGE 39
Score = 39.1 bits (92), Expect = 2e-04
Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHM-KIHEGIKAHQCN 868
G + ++C CG F Q ++L H H G K +
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 33.3 bits (77), Expect = 0.018
Identities = 14/46 (30%), Positives = 17/46 (36%), Gaps = 8/46 (17%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRA-HENEKP 805
+G + PY C C + F L RH R H EKP
Sbjct: 3 SGSSGTG-------KKPYECIECGKAFIQNTSLIRHWRYYHTGEKP 41
Score = 28.3 bits (64), Expect = 1.2
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 11/53 (20%)
Query: 74 NHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKS-HSENKVFRC 125
+ + G+ + C +C K F+ L RH + H+ K
Sbjct: 2 SSGSSGT----------GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 50.2 bits (121), Expect = 2e-08
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ G P++C C + F+++ L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 48.3 bits (116), Expect = 1e-07
Identities = 15/41 (36%), Positives = 16/41 (39%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
G P+ C C K FSRKD L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 47.9 bits (115), Expect = 1e-07
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+ G P+ C C + F++K L H + H+ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 47.5 bits (114), Expect = 2e-07
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGKVF+RK L H + H+G
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 45.6 bits (109), Expect = 8e-07
Identities = 14/41 (34%), Positives = 16/41 (39%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
G P+ C C K FSRKD L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 44.8 bits (107), Expect = 1e-06
Identities = 10/41 (24%), Positives = 15/41 (36%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
G P++C C F+ K L H + H+G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 44.4 bits (106), Expect = 2e-06
Identities = 13/41 (31%), Positives = 15/41 (36%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G Y C C K F+RKD L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 42.9 bits (102), Expect = 8e-06
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 7/48 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYAC 780
TG ++C C K F K L H + HSG ++ +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSG-------QSGPSS 43
Score = 42.1 bits (100), Expect = 2e-05
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T P+ C C + FS+K L H K G +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 39.8 bits (94), Expect = 9e-05
Identities = 11/41 (26%), Positives = 14/41 (34%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G ++C CG F +K L H K H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 38.2 bits (90), Expect = 3e-04
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G P+ C C + FSRKD L H +
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQK 33
Score = 37.1 bits (87), Expect = 8e-04
Identities = 9/41 (21%), Positives = 13/41 (31%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G ++C C F+ K L H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 36.7 bits (86), Expect = 0.001
Identities = 9/41 (21%), Positives = 13/41 (31%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G + C C K F+ K + H + H G
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 35.2 bits (82), Expect = 0.005
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+G E PY C C + F+ K QL H + H +
Sbjct: 3 SGSSGTG-------ENPYECCECGKVFSRKDQLVSHQKTHSGQSG 40
Score = 29.4 bits (67), Expect = 0.40
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
++C C K ++RK++L +H +TH
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTH 35
Score = 27.8 bits (63), Expect = 1.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE + C +C K F K L H K+HS
Sbjct: 9 GENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 49.4 bits (119), Expect = 3e-08
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
G P++CS C ++F ++ L H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 47.5 bits (114), Expect = 2e-07
Identities = 14/29 (48%), Positives = 14/29 (48%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
CSECGK F RK L H R H G
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 47.5 bits (114), Expect = 2e-07
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
S +G P+ CS C K F+RKD L H + H G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 46.7 bits (112), Expect = 3e-07
Identities = 11/39 (28%), Positives = 16/39 (41%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
G P+ CS C ++F +K L H R H +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.4 bits (106), Expect = 2e-06
Identities = 11/39 (28%), Positives = 14/39 (35%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
G P++C+ C F K L H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 44.0 bits (105), Expect = 3e-06
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 885 RKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
G P+ CS C K F+RKD L H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 43.7 bits (104), Expect = 4e-06
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 7/46 (15%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYAC 780
+G ++C C K F K L H R H+G E+ +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAG-------ESGPSS 41
Score = 43.3 bits (103), Expect = 5e-06
Identities = 14/39 (35%), Positives = 15/39 (38%)
Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G Y C+ C K F RKD L H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 42.1 bits (100), Expect = 1e-05
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ P+ CS C ++F++K L H + G +
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 40.2 bits (95), Expect = 6e-05
Identities = 10/39 (25%), Positives = 14/39 (35%)
Query: 829 KVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G ++C CG F +K L H + H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 37.5 bits (88), Expect = 5e-04
Identities = 10/39 (25%), Positives = 13/39 (33%)
Query: 857 KIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G ++C+ C F K L H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.3 bits (85), Expect = 0.001
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G + CS C K F K + H R H G
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 36.3 bits (85), Expect = 0.002
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 913 RKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G P+ CS C +AF+RKD L H R
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQR 31
Score = 34.8 bits (81), Expect = 0.006
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
E PY CS C + F K QL H R H E
Sbjct: 8 ENPYECSECGKAFNRKDQLISHQRTHAGESG 38
Score = 29.0 bits (66), Expect = 0.65
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
++C+ C K + RK++L +H RTH
Sbjct: 9 NPYECSECGKAFNRKDQLISHQRTH 33
Score = 28.6 bits (65), Expect = 0.95
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRC 125
GE + CS+C K F K L H ++H+
Sbjct: 7 GENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 28.2 bits (64), Expect = 1.3
Identities = 9/34 (26%), Positives = 13/34 (38%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
E P C C K F++ + H + H G
Sbjct: 8 ENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 50.7 bits (120), Expect = 6e-08
Identities = 19/110 (17%), Positives = 26/110 (23%), Gaps = 10/110 (9%)
Query: 699 GRRKRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHL 758
G + + + C C + H R+ C CS F
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELK 58
Query: 759 NRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
H K C C R F + RH N+ P
Sbjct: 59 QEHESKCE--------YKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAP 100
Score = 50.3 bits (119), Expect = 9e-08
Identities = 17/80 (21%), Positives = 29/80 (36%), Gaps = 3/80 (3%)
Query: 860 EGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
E + +QC +C K ++ + H R +C C+ F + H K + K
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEY-K 68
Query: 920 PFLCSMCAEAFSRKDHLKKH 939
C C F + +H
Sbjct: 69 KLTCLECMRTFKSSFSIWRH 88
Score = 49.9 bits (118), Expect = 2e-07
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 822 AKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLN 881
+ + +QC++C + H ++ A C C ++F +
Sbjct: 2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQ 59
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRH 911
H K + K C C + F + RH
Sbjct: 60 EHESKCEY-KKLTCLECMRTFKSSFSIWRH 88
Score = 48.7 bits (115), Expect = 3e-07
Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 4/86 (4%)
Query: 146 DGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIR 205
+ +V+ C +C+ + ++ H R C CS F H +
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEH-ESKCEYK 68
Query: 206 PFQCNVCYICFTNKSDLNRH-SRIHN 230
C C F + + RH +HN
Sbjct: 69 KLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 48.7 bits (115), Expect = 3e-07
Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRI 228
E + +QC +C+ + H R+ C C + F + H
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESK 64
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMK 255
K C C + F + RH
Sbjct: 65 CEY-KKLTCLECMRTFKSSFSIWRHQV 90
Score = 48.7 bits (115), Expect = 4e-07
Identities = 17/90 (18%), Positives = 27/90 (30%), Gaps = 3/90 (3%)
Query: 794 SRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLN 853
S + ++ C +C + + H ++ C C RF
Sbjct: 2 SSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQ 59
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRH 883
H E K C CM F + + RH
Sbjct: 60 EHESKCEYKK-LTCLECMRTFKSSFSIWRH 88
Score = 48.0 bits (113), Expect = 7e-07
Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 773 EAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHD 832
E + Y C +C+ K + + H R N C C F + H +
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV-----CPYCSLRFFSPELKQEH-ESKC 65
Query: 833 GVRDHQCQVCGNRFKQKSNLNIHMK 857
+ C C FK ++ H
Sbjct: 66 EYKKLTCLECMRTFKSSFSIWRHQV 90
Score = 45.3 bits (106), Expect = 5e-06
Identities = 14/84 (16%), Positives = 20/84 (23%), Gaps = 3/84 (3%)
Query: 86 EKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIH 145
+ + C C H + C C F+ H
Sbjct: 8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESKC 65
Query: 146 DGVKVFLCSVCSKTFTDKVKFNRH 169
+ K C C +TF RH
Sbjct: 66 EYKK-LTCLECMRTFKSSFSIWRH 88
Score = 44.5 bits (104), Expect = 1e-05
Identities = 13/80 (16%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Query: 230 NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
+ + C +C S + H ++ +C C F + H + K
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHESKCEY-K 68
Query: 290 PFHCSVCFESFTQKALLNIH 309
C C +F + H
Sbjct: 69 KLTCLECMRTFKSSFSIWRH 88
Score = 42.6 bits (99), Expect = 5e-05
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 14/104 (13%)
Query: 44 NDENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKT 103
+S + + ++C +C + + +H R + C C
Sbjct: 4 GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN------------AAVCPYCSLR 51
Query: 104 FVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRH-MKIHD 146
F H +S E K C +C F RH +++H+
Sbjct: 52 FFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 40.3 bits (93), Expect = 3e-04
Identities = 20/95 (21%), Positives = 29/95 (30%), Gaps = 14/95 (14%)
Query: 739 GIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLR 798
+ +QC +C+ H R C C +F H
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC---------RNAAVCPYCSLRFFSPELKQEHES 63
Query: 799 AHENEKPEKPQTCEVCQKTFDKMAKFKRH-LKVHD 832
E K TC C +TF RH ++VH+
Sbjct: 64 KCE----YKKLTCLECMRTFKSSFSIWRHQVEVHN 94
Score = 39.1 bits (90), Expect = 0.001
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRK 942
+ + + C +C S + H R +C C+ F + ++H K
Sbjct: 7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELKQEHESK 64
Query: 943 C 943
C
Sbjct: 65 C 65
Score = 36.8 bits (84), Expect = 0.005
Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 10/74 (13%)
Query: 286 DGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVN 345
+ + + C +C + H R+ N+ C C+ F H
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLCRNAAV--CPYCSLRFFSPELKQEHES------ 63
Query: 346 PFKCDEKSFNCSKC 359
KC+ K C +C
Sbjct: 64 --KCEYKKLTCLEC 75
Score = 30.6 bits (68), Expect = 0.75
Identities = 24/111 (21%), Positives = 32/111 (28%), Gaps = 18/111 (16%)
Query: 403 AASQKKETGKGKAKTVYTCEMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDENKASVNTA 462
+S + K VY C +C L H + N A
Sbjct: 1 GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-----------------NAA 43
Query: 463 KVKKESVEGVSMEGKSLSEFSGPVGNFKCALCEKTFVRKQTLDRH-VTVHG 512
S+ S E K E C C +TF ++ RH V VH
Sbjct: 44 VCPYCSLRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHN 94
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 48.4 bits (116), Expect = 1e-07
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACS 322
+ G K C C ++F + L IH R+H K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 48.0 bits (115), Expect = 1e-07
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
+ G K C C ++F S L IH R+H G + +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 46.4 bits (111), Expect = 5e-07
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCT 266
+G K C C K F L H ++H G K +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 44.9 bits (107), Expect = 1e-06
Identities = 12/42 (28%), Positives = 15/42 (35%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCS 238
G + C+ C F S L H R+H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 43.7 bits (104), Expect = 4e-06
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCS 896
G K+H C+ C F S L H R H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 43.0 bits (102), Expect = 7e-06
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCS 294
G K + C C K F L H R H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.6 bits (101), Expect = 1e-05
Identities = 13/42 (30%), Positives = 17/42 (40%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCN 868
G + H C CG F S L IH ++H G K +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.2 bits (100), Expect = 1e-05
Identities = 14/42 (33%), Positives = 14/42 (33%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCS 924
G K C C KNF L H R H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 42.2 bits (100), Expect = 1e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIKEFQC 745
C ECGK F + L+ H R+H G K
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 14/49 (28%), Positives = 15/49 (30%), Gaps = 7/49 (14%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACS 781
+G K C C K F S L H R H G E S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMG-------EKCSGPS 44
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCD 350
+ K H C C ++F S L IH ++ G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 39.9 bits (94), Expect = 1e-04
Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR-----KCYGPPTG 949
G K C C + F L+ H R KC GP +G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG 46
Score = 39.1 bits (92), Expect = 2e-04
Identities = 12/42 (28%), Positives = 12/42 (28%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCS 182
G K C C K F H R H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 34.9 bits (81), Expect = 0.005
Identities = 13/48 (27%), Positives = 15/48 (31%), Gaps = 7/48 (14%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
SG E + C C + F L H R H EK P
Sbjct: 3 SGSSGSG-------EKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 27.6 bits (62), Expect = 2.0
Identities = 12/36 (33%), Positives = 14/36 (38%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCE 126
GE S TC +C K F L H + H K
Sbjct: 9 GEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 27.6 bits (62), Expect = 2.5
Identities = 11/42 (26%), Positives = 16/42 (38%)
Query: 113 HLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
S S K C++C +F H ++H G K S
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 26.4 bits (59), Expect = 6.8
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K C+ C K + + L H R H
Sbjct: 11 KSHTCDECGKNFCYISALRIHQRVH 35
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 47.6 bits (114), Expect = 2e-07
Identities = 12/41 (29%), Positives = 15/41 (36%)
Query: 225 HSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
K + C+ C K F+R L RH KIH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 45.3 bits (108), Expect = 1e-06
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 169 HMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
+ K + C+ C ++FT+ +L H +IH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 44.9 bits (107), Expect = 1e-06
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 733 HVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
T K + C C K F HL RH + H+
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 43.7 bits (104), Expect = 4e-06
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTG 739
C+ECGK FTR L RH +IHT
Sbjct: 15 CNECGKAFTRIFHLTRHQKIHTR 37
Score = 42.6 bits (101), Expect = 9e-06
Identities = 13/41 (31%), Positives = 14/41 (34%)
Query: 253 HMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
SK Y C C K FTR L RH + H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 42.6 bits (101), Expect = 1e-05
Identities = 10/41 (24%), Positives = 13/41 (31%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLC 237
+ + CN C FT L RH +IH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 41.8 bits (99), Expect = 2e-05
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 281 HMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
+ K ++C+ C ++FT+ L H +IHT +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 40.6 bits (96), Expect = 5e-05
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 883 HMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLC 923
K + C+ C K F+R L RH + H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 39.1 bits (92), Expect = 2e-04
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 911 HMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
K + C+ C +AF+R HL +H +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQK 33
Score = 38.7 bits (91), Expect = 2e-04
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
T+SK + C+ C ++F++ +L H K+ +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 36.0 bits (84), Expect = 0.002
Identities = 9/41 (21%), Positives = 12/41 (29%)
Query: 141 HMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
K + C+ C K FT RH + H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 35.6 bits (83), Expect = 0.002
Identities = 9/35 (25%), Positives = 13/35 (37%)
Query: 827 HLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEG 861
+ + C CG F + +L H KIH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 35.2 bits (82), Expect = 0.003
Identities = 10/41 (24%), Positives = 13/41 (31%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
K++ CN C FT L RH + H
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 34.1 bits (79), Expect = 0.012
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 7/45 (15%)
Query: 761 HLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+ Y C+ C + FT L+RH + H +
Sbjct: 3 SGSSGTD-------SKSYNCNECGKAFTRIFHLTRHQKIHTRKSG 40
Score = 33.3 bits (77), Expect = 0.018
Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 10/44 (22%)
Query: 75 HLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHS 118
+ S+ C++C K F +HL RH K H+
Sbjct: 3 SGSSG----------TDSKSYNCNECGKAFTRIFHLTRHQKIHT 36
Score = 29.9 bits (68), Expect = 0.35
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Query: 796 HLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
+ + K C C K F ++ RH K+H
Sbjct: 3 SGSSGTDSKSYN---CNECGKAFTRIFHLTRHQKIHTR 37
Score = 29.5 bits (67), Expect = 0.42
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + CN C K + R LT H + H
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIH 35
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 46.4 bits (111), Expect = 3e-07
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPF 207
G + ++C C +SF Q+ +L +H RIH G P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 46.4 bits (111), Expect = 4e-07
Identities = 15/38 (39%), Positives = 20/38 (52%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
G + + C C +SF QK L +H RIHT S P +
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40
Score = 45.3 bits (108), Expect = 1e-06
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIK 741
C ECGK F +K +L H RIHTG
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSG 37
Score = 43.3 bits (103), Expect = 4e-06
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRY 263
S +G + + C C K F +K L H +IH GS
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 41.0 bits (97), Expect = 3e-05
Identities = 13/37 (35%), Positives = 15/37 (40%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPF 235
G R ++C C F K L H RIH G P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 39.5 bits (93), Expect = 1e-04
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYA 779
+G + ++C C K F +K L H R H+G P +
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTG-------SGPSS 40
Score = 38.7 bits (91), Expect = 2e-04
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 885 RKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
G + + C C K+F +K L H R H G P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.8 bits (86), Expect = 0.001
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPF 291
G + Y C C K F +K L H R H G P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.0 bits (84), Expect = 0.002
Identities = 11/31 (35%), Positives = 14/31 (45%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKP 805
+ Y C C + F KG L+ H R H P
Sbjct: 8 QRVYECQECGKSFRQKGSLTLHERIHTGSGP 38
Score = 35.6 bits (83), Expect = 0.002
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
G R ++CQ CG F+QK +L +H +IH G
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSG 37
Score = 34.5 bits (80), Expect = 0.007
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 311 RIHTNSKPHACSICTESFSQKSNLYIH 337
+ + + C C +SF QK +L +H
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLH 29
Score = 32.9 bits (76), Expect = 0.021
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 913 RKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G + + C C ++F +K L H R
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHER 31
Score = 32.5 bits (75), Expect = 0.033
Identities = 11/35 (31%), Positives = 14/35 (40%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPF 893
G + ++C C F K L H R H G P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 31.8 bits (73), Expect = 0.060
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPF 179
G +V+ C C K+F K H R H G P
Sbjct: 5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 28.3 bits (64), Expect = 1.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSH 117
G+ + C +C K+F K L H + H
Sbjct: 7 GQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 27.9 bits (63), Expect = 1.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ ++C C K + +K LT H R H
Sbjct: 9 RVYECQECGKSFRQKGSLTLHERIH 33
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 46.4 bits (110), Expect = 5e-07
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
+ G PF+CS C FTQR+ L H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 44.1 bits (104), Expect = 3e-06
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 224 RHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
G PF CS C + F++++ L +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKS 39
Score = 43.3 bits (102), Expect = 5e-06
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 280 RHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ G PF CS C FTQ+ L H R H +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPS 42
Score = 40.6 bits (95), Expect = 6e-05
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 732 RHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
G F+C C + F ++++L +H R H+
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 40.2 bits (94), Expect = 8e-05
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG 739
F CS+C +VFT++ L +H R H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 39.8 bits (93), Expect = 9e-05
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDG 917
G PF CS C + F++++ L +H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 38.3 bits (89), Expect = 3e-04
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 252 RHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
G + C+ C + FT+++ L +H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 38.3 bits (89), Expect = 3e-04
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 197 HLRIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
G PF+C+ C FT ++ L +H R H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 37.9 bits (88), Expect = 4e-04
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 910 RHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G PF CS C F+++++L +H R
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHER 33
Score = 37.5 bits (87), Expect = 6e-04
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 7/49 (14%)
Query: 760 RHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
+G E P+ CS CDR FT + L +H R H +
Sbjct: 2 SSGSSGAG-------ENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS 43
Score = 34.4 bits (79), Expect = 0.008
Identities = 8/40 (20%), Positives = 12/40 (30%)
Query: 826 RHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAH 865
G +C C F Q++ L H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 33.3 bits (76), Expect = 0.017
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 86 EKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSHS 118
S GE F CS+C + F + +L +H ++H+
Sbjct: 4 GSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36
Score = 32.9 bits (75), Expect = 0.028
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 140 RHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
G F CS C + FT + +H R H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 32.5 bits (74), Expect = 0.034
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
FKC+ C + + ++N L H RTH
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 31.4 bits (71), Expect = 0.097
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 309 HLRIHTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
P CS C F+Q++ L H +
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 31.0 bits (70), Expect = 0.15
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 855 HMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKP 892
G +C+ C FT ++ L +H R H
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40
Score = 29.1 bits (65), Expect = 0.71
Identities = 7/36 (19%), Positives = 13/36 (36%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDG 147
S + F+C +C F + +H + H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 28.7 bits (64), Expect = 0.94
Identities = 8/39 (20%), Positives = 13/39 (33%), Gaps = 3/39 (7%)
Query: 795 RHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
+ E P K C C + F + +H + H
Sbjct: 2 SSGSSGAGENPFK---CSKCDRVFTQRNYLVQHERTHAR 37
Score = 28.3 bits (63), Expect = 1.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
FKC+ C++ F ++ L +H H
Sbjct: 13 FKCSKCDRVFTQRNYLVQHERTH 35
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 46.5 bits (110), Expect = 5e-07
Identities = 14/43 (32%), Positives = 16/43 (37%)
Query: 885 RKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCA 927
K C IC K F LNRH H G KP+ +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.9 bits (106), Expect = 1e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVC 296
K+ C +C K F LNRH +H G KP+
Sbjct: 7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 44.5 bits (105), Expect = 2e-06
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 707 KKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICS 749
G T ++ C CGK+F L RH H+G K + S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 44.2 bits (104), Expect = 3e-06
Identities = 10/42 (23%), Positives = 16/42 (38%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVC 212
+ K C +C + F +LN H H G +P+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.8 bits (103), Expect = 4e-06
Identities = 13/42 (30%), Positives = 14/42 (33%)
Query: 227 RIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMC 268
K C +C K F LNRH H G K Y
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 43.8 bits (103), Expect = 4e-06
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCA 241
+ C +C F + LNRH H+G KP+ +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 42.2 bits (99), Expect = 1e-05
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCS 185
K C +C K F D NRH +H G KP+ S
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 42.2 bits (99), Expect = 1e-05
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 283 RNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHACSICT 325
+ K C +C + F LN H H+ KP++ +
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 42.2 bits (99), Expect = 1e-05
Identities = 17/49 (34%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSIC 783
K+ C IC K F + HLNRH HSG E PY+
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSG-------EKPYSSGPS 46
Score = 41.5 bits (97), Expect = 3e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 863 KAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICA 899
K C +C F + LNRH H G KP+ +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 40.7 bits (95), Expect = 5e-05
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 94 SFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQC 128
C C K F D +HLNRH SHS K +
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 40.3 bits (94), Expect = 6e-05
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 835 RDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVC 870
+ C++CG F+ +LN H H G K +
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 35.7 bits (82), Expect = 0.004
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEKP 805
AC IC + F L+RH +H EKP
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSHSGEKP 40
Score = 35.3 bits (81), Expect = 0.004
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 802 NEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVC 842
+ + K CE+C K F + RH H G + +
Sbjct: 6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 33.8 bits (77), Expect = 0.014
Identities = 7/29 (24%), Positives = 10/29 (34%)
Query: 913 RKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
K C +C + F HL +H
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKL 33
Score = 33.0 bits (75), Expect = 0.030
Identities = 13/49 (26%), Positives = 17/49 (34%), Gaps = 7/49 (14%)
Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKC 359
K AC IC + F +L H KL H EK ++
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRH-KLSH------SGEKPYSSGPS 46
Score = 32.6 bits (74), Expect = 0.039
Identities = 13/43 (30%), Positives = 14/43 (32%)
Query: 115 KSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCS 157
S K CE C F NRH H G K + S
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 30.3 bits (68), Expect = 0.23
Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 10/55 (18%)
Query: 46 ENSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQC 100
+ S + K+ C IC K + L H +H GE ++
Sbjct: 2 SSGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHS----------GEKPYSSGPS 46
Score = 26.4 bits (58), Expect = 5.4
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 488 NFKCALCEKTFVRKQTLDRHVTVH 511
C +C K F L+RH H
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSH 35
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 43.0 bits (102), Expect = 5e-06
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 891 KPFLCSI--CAKNFSRKDDLNRHMRKHDGIK 919
+PF+C+ C K F+R D+L RH R H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 41.8 bits (99), Expect = 1e-05
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHEGSK 261
+PF+C+ C K F+R D+L RH + H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 40.3 bits (95), Expect = 5e-05
Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 715 FPCS--ECGKVFTRKTTLKRHVRIHTGIK 741
F C+ CGK FTR L+RH R HTG K
Sbjct: 3 FMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 39.1 bits (92), Expect = 1e-04
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLK 289
+ ++CT C K FTR D+L RH R H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.9 bits (81), Expect = 0.005
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 777 PYACSI--CDRKFTIKGQLSRHLRAHENEK 804
P+ C+ C ++FT +L RH R H EK
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 34.5 bits (80), Expect = 0.005
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIHNGIK 233
RPF C C FT +L RH R H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 33.7 bits (78), Expect = 0.011
Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 919 KPFLCSM--CAEAFSRKDHLKKHMRK 942
+PF+C+ C + F+R D L++H R
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRT 26
Score = 33.0 bits (76), Expect = 0.019
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIR 205
+PF C+ C + FT+ L H R H G +
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 32.2 bits (74), Expect = 0.031
Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 741 KEFQC-WI-CSKCFMEKSHLNRHLRKHSGV 768
+ F C W C K F L RH R H+G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30
Score = 31.0 bits (71), Expect = 0.087
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Query: 863 KAHQCNV--CMMKFTNKSDLNRHMRKHDGVK 891
+ C C +FT +L RH R H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 31.0 bits (71), Expect = 0.10
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTH 79
+ F C C KR+ R + L H RTH
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 30.7 bits (70), Expect = 0.15
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSK 317
+PF C+ C + FT+ L H R HT K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 27.6 bits (62), Expect = 1.4
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Query: 835 RDHQCQV--CGNRFKQKSNLNIHMKIHEGIK 863
R C CG RF + L H + H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 26.8 bits (60), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 149 KVFLCSV--CSKTFTDKVKFNRHMRAHEGIK 177
+ F+C+ C K FT + RH R H G K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 49.3 bits (117), Expect = 8e-06
Identities = 87/604 (14%), Positives = 161/604 (26%), Gaps = 212/604 (35%)
Query: 537 TSGDLNTSLAPSDGTIPEIDINKSDTGNMYIVTPKQEPDSIVKEEMLSDYDDNDNSMMTA 596
+ G L L +P + + S ++E+ + T
Sbjct: 12 SHGSLEHVL-----LVPT---------ASFFIA------SQLQEQFNKILPEP-----TE 46
Query: 597 TQDDDDEPFQSEVENDDDDVPLSKR-TSYYASSADEERPAPKKRGRKKGVPTRRKSTGSR 655
DDEP + E L + Y +S + + + +
Sbjct: 47 GFAADDEP-TTPAE-------LVGKFLGYVSSLVEPSKVGQFDQVLNLCL---------- 88
Query: 656 KSAKSDVDTTDYESAMDTDYVDDNE----ASESRNEDSGVEGKENEDGR-----RKRGKR 706
T++E+ Y++ N+ A++ E+ K E + R KR
Sbjct: 89 ---------TEFEN----CYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKR 135
Query: 707 KKGDTPQE--FPCSECGKVFTRKTTLKRHVRIHT-----GIKEFQCWICSKCFME----- 754
F G ++ G + F E
Sbjct: 136 PFDKKSNSALFRAVGEGNA-----------QLVAIFGGQGNTD-------DYFEELRDLY 177
Query: 755 ---KSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP--- 808
+ ++ + + + A + + I L + + P+K
Sbjct: 178 QTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLE-----NPSNTPDKDYLL 232
Query: 809 ------------Q------TCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQV--------- 841
Q T ++ T + + +LK G H +
Sbjct: 233 SIPISCPLIGVIQLAHYVVTAKLLGFT---PGELRSYLK---GATGHSQGLVTAVAIAET 286
Query: 842 -CGNRFKQKSNLNIHMKIHEGIKAHQC-NVCMMKFTNKSDLNRHMRKHDGVK-PFLCSIC 898
F I + G++ ++ + + D + +GV P L SI
Sbjct: 287 DSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENN---EGVPSPML-SI- 341
Query: 899 AKNFSRK------DDLNRHM--RKHDGI------KPFLCSMCAEAFSRKDHLKKHMRKCY 944
N +++ + N H+ K I K + S ++ L +RK
Sbjct: 342 -SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSL---YGLNLTLRKAK 397
Query: 945 GPPTGE-YR-P-RRRAKK-----LPATDVPPTVVGSQL----NTMISQDLTVREP----- 987
P + R P R K LP P S L + +I++DL
Sbjct: 398 APSGLDQSRIPFSERKLKFSNRFLPVA-SP---FHSHLLVPASDLINKDLVKNNVSFNAK 453
Query: 988 ----PQY--------RSVQNSIVSEHAHQVLQASVGQAAASGLFWCAAAQYYTTPPT--I 1033
P Y R + SI +++ V W Q T +
Sbjct: 454 DIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPV--------KWETTTQ---FKATHIL 502
Query: 1034 EFAP 1037
+F P
Sbjct: 503 DFGP 506
Score = 42.0 bits (98), Expect = 0.001
Identities = 27/165 (16%), Positives = 50/165 (30%), Gaps = 63/165 (38%)
Query: 506 RHVTV-HGITGAEHD-EIMGESNPATAQVNASETSGDLNTSL-APSDGTIPEIDINKSDT 562
R +T+ HG EH + P + AS+ N L P++G +
Sbjct: 7 RPLTLSHG--SLEHVLLV-----PTASFFIASQLQEQFNKILPEPTEGFAAD-------- 51
Query: 563 GNMYIVTPKQEPDSIVKEEMLSDYDDNDNSMMTATQDDDDEP-------------FQSEV 609
EP + E++ + ++ + + F++
Sbjct: 52 ---------DEPTTPA--ELVGKF-----LGYVSSLVEPSKVGQFDQVLNLCLTEFENCY 95
Query: 610 --END----------DDDVPLSKR----TSYYASSADEERPAPKK 638
ND ++D L K +Y + +RP KK
Sbjct: 96 LEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKK 140
Score = 37.3 bits (86), Expect = 0.037
Identities = 42/308 (13%), Positives = 78/308 (25%), Gaps = 108/308 (35%)
Query: 793 LSRHLR--AHENEKPEKPQTCEVCQKTFDKMAKFKR-HLKVHDGVRDHQCQVCGNRFKQK 849
+ + L + E + Q +V + F+ +L+ GN
Sbjct: 61 VGKFLGYVSSLVEPSKVGQFDQVLNLCLTE---FENCYLE-------------GN----- 99
Query: 850 SNLNIH--------------MKIHEGIKA--HQCNVCMMKFTNK--SDLNRHMRKHDGVK 891
+IH +K E IK + F K S L R + + + +
Sbjct: 100 ---DIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGN-AQ 155
Query: 892 PFLCSICAKNF-----SRK--DDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMRKCY 944
F + ++L R + + + + + L +
Sbjct: 156 LVAI------FGGQGNTDDYFEEL-RDL--YQTYHVLVGDLIKFSAETLSELIRTTLDA- 205
Query: 945 GPPTGEYRPR--------RRAKKLPATD----VP---PTVVGSQL----NTMISQDLTVR 985
+ + P D +P P + QL T T
Sbjct: 206 ----EKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFT-- 259
Query: 986 EPPQYRSVQNSIVSEHAHQVLQASVGQAAASG-------------LFWCAAA--QYYTTP 1030
P + RS + H+ ++ A S LF+ + Y
Sbjct: 260 -PGELRSYLKG-ATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAY--- 314
Query: 1031 PTIEFAPK 1038
P P
Sbjct: 315 PNTSLPPS 322
Score = 34.6 bits (79), Expect = 0.19
Identities = 53/271 (19%), Positives = 76/271 (28%), Gaps = 96/271 (35%)
Query: 171 RAHEGIKPFQCSVCSESFTQRSNLNIH------LRIHDGIRPFQCNVCYICFTNKSDLNR 224
R +E + + S + S N L I + Q Y+ TN L
Sbjct: 309 RCYEA---YPNTSLPPSILEDSLENNEGVPSPMLSIS-NLTQEQVQ-DYVNKTNSH-LPA 362
Query: 225 HSRIH----NGIKPF--------LCSMCAKCFSRK----DDLNRHMKIHEGSKRYLCTMC 268
++ NG K L + RK L++ +I S+R
Sbjct: 363 GKQVEISLVNGAKNLVVSGPPQSLYGLNLTL--RKAKAPSGLDQS-RI-PFSERK----- 413
Query: 269 PKCFTRKDDLNRHMRNHDGLK---PFHCS--VCFESFTQKALLNIHLRIHTNSKPHACSI 323
K R L PFH V K L+ ++ + I
Sbjct: 414 LKFSNR------------FLPVASPFHSHLLVPASDLINKDLVKNNVSFN----AKDIQI 457
Query: 324 ---CTESFSQKSNLYIHLKLQHGVNPFKCDEKSFNCSKCLNIVRIPV--EIKVEVPFVCK 378
T S+L L ++ D I+R+PV E
Sbjct: 458 PVYDTFD---GSDLR---VLSGSISERIVDC----------IIRLPVKWE---------T 492
Query: 379 ACASEETKK-D-KPGAAS-LG-----NKRGK 401
+ T D PG AS LG NK G
Sbjct: 493 TTQFKATHILDFGPGGASGLGVLTHRNKDGT 523
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 42.7 bits (101), Expect = 1e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 226 SRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
S +G KP+ C+ C + FS + L +H K+H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 41.9 bits (99), Expect = 2e-05
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG 739
+ C+EC + F+ L +H ++HT
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMHTV 35
Score = 41.2 bits (97), Expect = 3e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 173 HEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQC 209
G KP+ C+ C E+F+ + L H ++H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 40.0 bits (94), Expect = 8e-05
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKPHAC 321
G KP+ C+ C E+F+ L H ++HT +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 37.7 bits (88), Expect = 5e-04
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
+G K + C C + F + + L +H + H+
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 36.5 bits (85), Expect = 0.001
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKHDG 917
G KP+ C+ C + FS + L +H + H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 36.1 bits (84), Expect = 0.002
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 915 HDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C+ C E FS + L +H +
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQK 31
Score = 35.8 bits (83), Expect = 0.003
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 311 RIHTNSKPHACSICTESFSQKSNLYIHLKLQHGVNPFKC 349
+ KP++C+ C E+FS + L H K+ +
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 35.4 bits (82), Expect = 0.003
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 199 RIHDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
G +P+ C C F++ + L +H ++H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 34.6 bits (80), Expect = 0.007
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQC 867
G + + C C F + L H K+H
Sbjct: 5 SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 33.8 bits (78), Expect = 0.012
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 255 KIHEGSKRYLCTMCPKCFTRKDDLNRHMRNHDGLKPFHC 293
G K Y C C + F+ + L +H + H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 32.7 bits (75), Expect = 0.031
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 91 GEGSFTCSQCPKTFVDKWHLNRHLKSHS 118
GE ++C++C +TF D L +H K H+
Sbjct: 7 GEKPYSCAECKETFSDNNRLVQHQKMHT 34
Score = 32.3 bits (74), Expect = 0.044
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKP 808
E PY+C+ C F+ +L +H + H +
Sbjct: 8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 30.8 bits (70), Expect = 0.14
Identities = 9/39 (23%), Positives = 16/39 (41%)
Query: 143 KIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQC 181
G K + C+ C +TF+D + +H + H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 29.2 bits (66), Expect = 0.57
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQC 839
EKP +C C++TF + +H K+H
Sbjct: 8 EKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 28.8 bits (65), Expect = 0.84
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 857 KIHEGIKAHQCNVCMMKFTNKSDLNRHMRKHDGVKPFLC 895
G K + C C F++ + L +H + H
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 27.7 bits (62), Expect = 2.2
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K + C C + ++ NRL H + H
Sbjct: 9 KPYSCAECKETFSDNNRLVQHQKMH 33
Score = 26.5 bits (59), Expect = 4.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
+ CA C++TF L +H +H
Sbjct: 11 YSCAECKETFSDNNRLVQHQKMH 33
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 41.0 bits (96), Expect = 3e-05
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHM-KIHEGS 260
K + C +C + F+R+D L RH KIH G+
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 38.3 bits (89), Expect = 3e-04
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRK-HDG 917
K + C +C + F+R+D L RH +K H G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 35.2 bits (81), Expect = 0.003
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 919 KPFLCSMCAEAFSRKDHLKKHMRKCYG 945
K + C +C AF+R+D L +H +K +
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHS 27
Score = 32.9 bits (75), Expect = 0.021
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRN-HDG 287
K Y C +C + FTR+D L RH + H G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 30.6 bits (69), Expect = 0.12
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 741 KEFQCWICSKCFMEKSHLNRHLRK-HSG 767
K + C +C++ F + L RH +K HSG
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 30.2 bits (68), Expect = 0.19
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 205 RPFQCNVCYICFTNKSDLNRHSR-IHNG 231
+ + C +C FT + L RH++ IH+G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 29.1 bits (65), Expect = 0.46
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLR-IHDG 203
K + C +C+ +FT+R L H + IH G
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 28.3 bits (63), Expect = 0.85
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 715 FPCSECGKVFTRKTTLKRHVR-IHTG 739
+ C C + FTR+ L RH + IH+G
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 27.9 bits (62), Expect = 1.4
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 777 PYACSICDRKFTIKGQLSRHLR 798
YAC +C+R FT + L RH +
Sbjct: 2 AYACGLCNRAFTRRDLLIRHAQ 23
Score = 27.5 bits (61), Expect = 1.7
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 289 KPFHCSVCFESFTQKALLNIHLR 311
K + C +C +FT++ LL H +
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQ 23
Score = 27.1 bits (60), Expect = 2.7
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGS 83
K + C +C + + R++ L H + +G+
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN 29
Score = 26.4 bits (58), Expect = 5.0
Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 489 FKCALCEKTFVRKQTLDRHV-TVHG 512
+ C LC + F R+ L RH +H
Sbjct: 3 YACGLCNRAFTRRDLLIRHAQKIHS 27
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 40.0 bits (94), Expect = 6e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
+ F+C +C + F+R++ L RH R H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 38.5 bits (90), Expect = 2e-04
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
+ F+C +C + F+R++ L RH + H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 38.5 bits (90), Expect = 2e-04
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
F C C + F R+ LKRH R HT K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 37.7 bits (88), Expect = 3e-04
Identities = 11/23 (47%), Positives = 18/23 (78%)
Query: 919 KPFLCSMCAEAFSRKDHLKKHMR 941
+ F+C +C AF+R++HLK+H R
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYR 23
Score = 35.8 bits (83), Expect = 0.002
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
+ ++C +C + F R++ L RH R+H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.8 bits (83), Expect = 0.002
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEK 804
+ C +C R F + L RH R+H NEK
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 35.0 bits (81), Expect = 0.004
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 741 KEFQCWICSKCFMEKSHLNRHLRKHSG 767
+ F C +C++ F + HL RH R H+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 31.9 bits (73), Expect = 0.051
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
+ F C VC+ +F ++ +L H R H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 31.5 bits (72), Expect = 0.066
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
+ F C +C + +AR+ L H R+H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSH 25
Score = 31.1 bits (71), Expect = 0.081
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSK 317
+ F C VC +F ++ L H R HTN K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 31.1 bits (71), Expect = 0.088
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
R F C VC F + L RH R H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.7 bits (70), Expect = 0.10
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENK 121
F C C + F + HL RH +SH+ K
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 29.2 bits (66), Expect = 0.38
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 863 KAHQCNVCMMKFTNKSDLNRHMRKHDGVK 891
++ C VC F + L RH R H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.8 bits (65), Expect = 0.59
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIK 177
+ F+C VC++ F + RH R+H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.4 bits (64), Expect = 0.69
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F C +C + F R++ L RH H
Sbjct: 3 FVCEVCTRAFARQEHLKRHYRSH 25
Score = 28.4 bits (64), Expect = 0.88
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 807 KPQTCEVCQKTFDKMAKFKRHLKVHDGVR 835
+ CEVC + F + KRH + H +
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 26.9 bits (60), Expect = 2.8
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 835 RDHQCQVCGNRFKQKSNLNIHMKIHEGIK 863
R C+VC F ++ +L H + H K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 36.8 bits (84), Expect = 0.001
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
+G KP+ C +C F RKD ++ H++ H+GS
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 36.0 bits (82), Expect = 0.002
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKHDG 917
G KP+ C +C F RKD ++ H+R HDG
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 34.9 bits (79), Expect = 0.006
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 48 SSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAG 82
SSG K + C +C R+ RK+R++ H+R+H+
Sbjct: 2 SSGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 34.1 bits (77), Expect = 0.013
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNHDG 287
G K Y C +C F RKD ++ H+R+HDG
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.6 bits (73), Expect = 0.034
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDN 771
+G K + C +C F K ++ H+R H G V
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGK 39
Score = 32.6 bits (73), Expect = 0.037
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 201 HDGIRPFQCNVCYICFTNKSDLNRHSRIHNG 231
G +P+ C VC + F K ++ H R H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.2 bits (72), Expect = 0.052
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIHDG 203
G KP+ C VC F ++ ++ H+R HDG
Sbjct: 4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.2 bits (72), Expect = 0.052
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQT 810
E PY+C +C +F K ++S H+R+H+ + +
Sbjct: 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS 43
Score = 31.8 bits (71), Expect = 0.073
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIHEG 861
G + + C VCG RFK+K ++ H++ H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 30.3 bits (67), Expect = 0.28
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 915 HDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G KP+ C +C F RKD + H+R
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVR 31
Score = 29.9 bits (66), Expect = 0.35
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVHDG 833
EKP +C VC F + + H++ HDG
Sbjct: 8 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 29.1 bits (64), Expect = 0.59
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKHDG 889
G K + C VC ++F K ++ H+R HDG
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 28.7 bits (63), Expect = 0.88
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG 739
+ C CG F RK + HVR H G
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 28.3 bits (62), Expect = 1.3
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQHG 343
+ KP++C +C F +K + H++ G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.2 bits (59), Expect = 3.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
G K + C VC F K + + H+R+H+G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 27.2 bits (59), Expect = 3.4
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
G KP+ C VC F +K ++ H+R H S
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 26.4 bits (57), Expect = 5.7
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
+ C +C F RK + HV H
Sbjct: 11 YSCPVCGLRFKRKDRMSYHVRSH 33
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 34.3 bits (78), Expect = 0.007
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 201 HDGIRPFQCNVCYICFTNKSDLNRHSRIH 229
G RPF C +C FT K++ RH ++H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 34.3 bits (78), Expect = 0.007
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 285 HDGLKPFHCSVCFESFTQKALLNIHLRIHTNS 316
G +PF C +C +FT KA HL++HT++
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 33.6 bits (76), Expect = 0.014
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
G +PF C +C +FT ++N HL++H
Sbjct: 1 GSSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 33.6 bits (76), Expect = 0.015
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 775 EAPYACSICDRKFTIKGQLSRHLRAHEN 802
+ P+ C IC FT K +RHL+ H +
Sbjct: 5 KRPFVCRICLSAFTTKANCARHLKVHTD 32
Score = 32.4 bits (73), Expect = 0.036
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
+G +PF+C +C F+ K + RH+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 30.9 bits (69), Expect = 0.12
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
G +PF+C IC F+ K + RH++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (66), Expect = 0.36
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 145 HDGVKVFLCSVCSKTFTDKVKFNRHMRAH 173
G + F+C +C FT K RH++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.0 bits (64), Expect = 0.69
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 806 EKPQTCEVCQKTFDKMAKFKRHLKVH 831
++P C +C F A RHLKVH
Sbjct: 5 KRPFVCRICLSAFTTKANCARHLKVH 30
Score = 28.6 bits (63), Expect = 0.73
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 859 HEGIKAHQCNVCMMKFTNKSDLNRHMRKH 887
G + C +C+ FT K++ RH++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 28.6 bits (63), Expect = 0.83
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 737 HTGIKEFQCWICSKCFMEKSHLNRHLRKHS 766
+G + F C IC F K++ RHL+ H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 28.6 bits (63), Expect = 0.94
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 257 HEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
G + ++C +C FT K + RH++ H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 28.2 bits (62), Expect = 0.96
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 915 HDGIKPFLCSMCAEAFSRKDHLKKHMR 941
G +PF+C +C AF+ K + +H++
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLK 28
Score = 28.2 bits (62), Expect = 0.98
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHT 738
G P F C C FT K RH+++HT
Sbjct: 4 GKRP--FVCRICLSAFTTKANCARHLKVHT 31
Score = 28.2 bits (62), Expect = 1.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 831 HDGVRDHQCQVCGNRFKQKSNLNIHMKIH 859
G R C++C + F K+N H+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 27.4 bits (60), Expect = 2.4
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 313 HTNSKPHACSICTESFSQKSNLYIHLKLQ 341
+ +P C IC +F+ K+N HLK+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 26.3 bits (57), Expect = 5.6
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 117 HSENKVFRCEQCRFDFYVKREYNRHMKIH 145
S + F C C F K RH+K+H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 35.5 bits (81), Expect = 0.012
Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 850 SNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMR-KHDGVK---PFLCSICAKNFSRK 905
+ + + + + ++C C + + + H+ +H V ++C C R
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 906 DDLNRH-MRKHDGIKPFLCSM 925
D L+ H ++ H G + F +M
Sbjct: 64 DALSEHNLKYHPGEENFKLTM 84
Score = 35.5 bits (81), Expect = 0.013
Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
Query: 109 HLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHM-KIHDGVK---VFLCSVCSKTFTDKV 164
H + + ++ + C+ C F + H+ H V ++C C+
Sbjct: 5 HHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYD 64
Query: 165 KFNRH-MRAHEGIKPFQCSV 183
+ H ++ H G + F+ ++
Sbjct: 65 ALSEHNLKYHPGEENFKLTM 84
Score = 32.8 bits (74), Expect = 0.12
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 794 SRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHL-KVHDGVR---DHQCQVCGNRFKQK 849
H +N+K E C+ C + F H+ H V + C C K+
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 850 SNLNIH-MKIHEGIKAHQCNVCMM 872
L+ H +K H G + + +
Sbjct: 64 DALSEHNLKYHPGEENFKLTMVKR 87
Score = 32.8 bits (74), Expect = 0.13
Identities = 12/79 (15%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Query: 166 FNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRI-HDGIR---PFQCNVCYICFTNKSD 221
+ + + + ++C C+ + H+ H + + C C
Sbjct: 6 HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65
Query: 222 LNRH-SRIHNGIKPFLCSM 239
L+ H + H G + F +M
Sbjct: 66 LSEHNLKYHPGEENFKLTM 84
Score = 32.1 bits (72), Expect = 0.20
Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 79 HEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRHLKSH----SENKVFRCEQCRFDFYV 134
H +++++ EG + C C D H+ S N + C +C F
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 135 KREYNRH-MKIHDGVKVFLCSV 155
+ H +K H G + F ++
Sbjct: 63 YDALSEHNLKYHPGEENFKLTM 84
Score = 31.7 bits (71), Expect = 0.27
Identities = 11/66 (16%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMR-KHDGIK---PFLCSMCAEAFSRKDHLK 937
+ + + C C + H+ +H + ++C C R D L
Sbjct: 8 HNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALS 67
Query: 938 KHMRKC 943
+H K
Sbjct: 68 EHNLKY 73
Score = 30.9 bits (69), Expect = 0.63
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 5/82 (6%)
Query: 191 RSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSRI-HNGIK---PFLCSMCAKCFSR 246
+ + + + ++C C + + H H + ++C C R
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 247 KDDLNRH-MKIHEGSKRYLCTM 267
D L+ H +K H G + + TM
Sbjct: 63 YDALSEHNLKYHPGEENFKLTM 84
Score = 30.5 bits (68), Expect = 0.71
Identities = 18/92 (19%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 47 NSSGKKMVKKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEGGEGSFTCSQCPKTFVD 106
N KK+ ++C C + N T H+ + S+ C +C
Sbjct: 9 NQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNS------SYVCVECNFLTKR 62
Query: 107 KWHLNRH-LKSHSENKVFRCEQCRFDFYVKRE 137
L+ H LK H + F+ + + E
Sbjct: 63 YDALSEHNLKYHPGEENFKLTMVKRNNQTIFE 94
Score = 30.5 bits (68), Expect = 0.84
Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 4/71 (5%)
Query: 276 DDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRI-HTN---SKPHACSICTESFSQK 331
+ + +N + C C + H+ H N + + C C +
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 332 SNLYIHLKLQH 342
L H H
Sbjct: 64 DALSEHNLKYH 74
Score = 29.4 bits (65), Expect = 1.9
Identities = 11/81 (13%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 248 DDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRN-HDGLK---PFHCSVCFESFTQK 303
+ + + + Y C C + H+ + H + + C C +
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRY 63
Query: 304 ALLNIH-LRIHTNSKPHACSI 323
L+ H L+ H + ++
Sbjct: 64 DALSEHNLKYHPGEENFKLTM 84
Score = 27.4 bits (60), Expect = 8.4
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 6/80 (7%)
Query: 728 TTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLR-KHSGVVDNMEAEAPYACSICDRK 786
+ + ++C C+ + + H+ +H N+ + Y C C+
Sbjct: 4 HHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHP----NVVLNSSYVCVECNFL 59
Query: 787 FTIKGQLSRH-LRAHENEKP 805
LS H L+ H E+
Sbjct: 60 TKRYDALSEHNLKYHPGEEN 79
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 33.4 bits (76), Expect = 0.016
Identities = 12/32 (37%), Positives = 18/32 (56%)
Query: 56 KFKCNICPKRYARKNRLTNHLRTHEAGSGDEK 87
KF C CPKR+ R + L+ H+ HE + +
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGEERR 33
Score = 32.2 bits (73), Expect = 0.045
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSKR 262
F C C K F R D L++H+ +HE
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 31.4 bits (71), Expect = 0.074
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 262 RYLCTMCPKCFTRKDDLNRHMRNHDGLKP 290
++ C CPK F R D L++H+ H+ L
Sbjct: 2 KFACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 31.0 bits (70), Expect = 0.089
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 893 FLCSICAKNFSRKDDLNRHMRKHDGIKP 920
F C C K F R D L++H+ H+ +
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 30.3 bits (68), Expect = 0.21
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEKPEK 807
+AC C ++F LS+H+ HE E+
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 29.9 bits (67), Expect = 0.28
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 921 FLCSMCAEAFSRKDHLKKHMR 941
F C C + F R DHL KH+
Sbjct: 3 FACPECPKRFMRSDHLSKHIT 23
Score = 29.9 bits (67), Expect = 0.29
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 743 FQCWICSKCFMEKSHLNRHLRKHSG 767
F C C K FM HL++H+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHEL 27
Score = 29.1 bits (65), Expect = 0.42
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKE 742
F C EC K F R L +H+ +H + E
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 29.1 bits (65), Expect = 0.45
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENK 121
F C +CPK F+ HL++H+ H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLHELLG 29
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 38.3 bits (88), Expect = 0.016
Identities = 23/156 (14%), Positives = 39/156 (25%), Gaps = 16/156 (10%)
Query: 632 ERPAPKKRGRKKGVPTRRKSTGSRKS-AKSDVDTTDYESAMDTDYVDDNEASESRN---- 686
R + +K P ++ + + +T + D S
Sbjct: 2 PRRSARKAQSAIASPADTNVVPAKDAPTTNSPPSTTSPNQAAADANQQQAGIVSSQSGPN 61
Query: 687 --EDSGVEGKENEDGRRKRGKRKKGDTP---QEFPCSECGKVFTRKTTLKRHVRIHTGIK 741
DS N DG P + + K T +
Sbjct: 62 AVGDSAPSSSVNNDGDIITRPTSDSIAAVANATKPAAVVSDPQSMKVTPIVNP------S 115
Query: 742 EFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAP 777
+ C +C+ F S L+ HLR + P
Sbjct: 116 SYVCNVCNARFSTMSALSEHLRSDHRDDASTLLATP 151
Score = 34.0 bits (77), Expect = 0.31
Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 6/68 (8%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRT-HEAGSGDEKSEGGEGSFTCSQCPKTFVDKWHLNRH 113
+ CN+C R++ + L+ HLR+ H + + + ++F+ W R
Sbjct: 115 SSYVCNVCNARFSTMSALSEHLRSDHRDDAS-----TLLATPMINNAIRSFLTAWDDIRI 169
Query: 114 LKSHSENK 121
L +K
Sbjct: 170 LSPDVSSK 177
Score = 32.9 bits (74), Expect = 0.65
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 314 TNSKPHACSICTESFSQKSNLYIHLKLQHGVNP 346
N + C++C FS S L HL+ H +
Sbjct: 112 VNPSSYVCNVCNARFSTMSALSEHLRSDHRDDA 144
Score = 32.1 bits (72), Expect = 1.3
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 863 KAHQCNVCMMKFTNKSDLNRHMR 885
++ CNVC +F+ S L+ H+R
Sbjct: 115 SSYVCNVCNARFSTMSALSEHLR 137
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 33.1 bits (76), Expect = 0.020
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 720 CGKVFTRKTTLKRHVRIHTGIK 741
CGKV+ + + L+ H+R HTG +
Sbjct: 16 CGKVYGKTSHLRAHLRWHTGER 37
Score = 30.0 bits (68), Expect = 0.21
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Query: 741 KEFQCWI--CSKCFMEKSHLNRHLRKHSG 767
K+ C I C K + + SHL HLR H+G
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTG 35
Score = 29.2 bits (66), Expect = 0.46
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIR 205
K C + C + + + S+L HLR H G R
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 28.5 bits (64), Expect = 0.80
Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 891 KPFLCSI--CAKNFSRKDDLNRHMRKHDGIK 919
K +C I C K + + L H+R H G +
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 28.1 bits (63), Expect = 1.3
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTH 79
K+ C+I C K Y + + L HLR H
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWH 33
Score = 26.5 bits (59), Expect = 4.1
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 919 KPFLCSM--CAEAFSRKDHLKKHMRK 942
K +C + C + + + HL+ H+R
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRW 32
Score = 26.2 bits (58), Expect = 6.5
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDGLK 289
K+++C + C K + + L H+R H G +
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 25.8 bits (57), Expect = 7.2
Identities = 10/36 (27%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 802 NEKPEKPQTCEV--CQKTFDKMAKFKRHLKVHDGVR 835
+ +K C + C K + K + + HL+ H G R
Sbjct: 2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 25.8 bits (57), Expect = 7.2
Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 289 KPFHCSV--CFESFTQKALLNIHLRIHTNSK 317
K C + C + + + + L HLR HT +
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 25.8 bits (57), Expect = 9.4
Identities = 9/31 (29%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 835 RDHQCQV--CGNRFKQKSNLNIHMKIHEGIK 863
+ H C + CG + + S+L H++ H G +
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 32.9 bits (75), Expect = 0.020
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 235 FLCSMCAKCFSRKDDLNRHMKIHEGSK 261
F C C K F R D L H+ +HE K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 32.6 bits (74), Expect = 0.027
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 262 RYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
++ C CPK F R D L H+ H+ K
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHENKK 29
Score = 32.2 bits (73), Expect = 0.038
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 56 KFKCNICPKRYARKNRLTNHLRTHEA 81
KF C CPKR+ R + LT H+ HE
Sbjct: 2 KFACPECPKRFMRSDHLTLHILLHEN 27
Score = 31.0 bits (70), Expect = 0.082
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 743 FQCWICSKCFMEKSHLNRHLRKHSG 767
F C C K FM HL H+ H
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHEN 27
Score = 31.0 bits (70), Expect = 0.11
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 893 FLCSICAKNFSRKDDLNRHMRKHDGIK 919
F C C K F R D L H+ H+ K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 30.2 bits (68), Expect = 0.15
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENK 121
F C +CPK F+ HL H+ H K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 29.9 bits (67), Expect = 0.23
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 921 FLCSMCAEAFSRKDHLKKHMR 941
F C C + F R DHL H+
Sbjct: 3 FACPECPKRFMRSDHLTLHIL 23
Score = 29.1 bits (65), Expect = 0.43
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEK 804
+AC C ++F L+ H+ HEN+K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 28.7 bits (64), Expect = 0.57
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
F C EC K F R L H+ +H K
Sbjct: 3 FACPECPKRFMRSDHLTLHILLHENKK 29
Score = 25.6 bits (56), Expect = 9.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
F C C K F+R L H+ +H
Sbjct: 3 FACPECPKRFMRSDHLTLHILLH 25
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 32.9 bits (74), Expect = 0.020
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAH 800
PY+CS+C ++F++K Q+ H R H
Sbjct: 3 PYSCSVCGKRFSLKHQMETHYRVH 26
Score = 32.1 bits (72), Expect = 0.045
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 890 VKPFLCSICAKNFSRKDDLNRHMRKHDG 917
++P+ CS+C K FS K + H R H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 31.3 bits (70), Expect = 0.082
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTG 739
+ CS CGK F+ K ++ H R+HTG
Sbjct: 4 YSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 30.5 bits (68), Expect = 0.14
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEG 259
++P+ CS+C K FS K + H ++H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 30.2 bits (67), Expect = 0.21
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDG 203
++P+ CSVC + F+ + + H R+H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 29.8 bits (66), Expect = 0.24
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 834 VRDHQCQVCGNRFKQKSNLNIHMKIHEG 861
+R + C VCG RF K + H ++H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 28.6 bits (63), Expect = 0.59
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 204 IRPFQCNVCYICFTNKSDLNRHSRIHNG 231
+RP+ C+VC F+ K + H R+H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 28.2 bits (62), Expect = 0.87
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHT 314
++P+ CSVC + F+ K + H R+HT
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHT 27
Score = 26.7 bits (58), Expect = 3.1
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 54 VKKFKCNICPKRYARKNRLTNHLRTH 79
++ + C++C KR++ K+++ H R H
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVH 26
Score = 26.7 bits (58), Expect = 3.2
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
++ + CSVC K F+ K + H R H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.3 bits (57), Expect = 5.2
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 317 KPHACSICTESFSQKSNLYIHLKLQHG 343
+P++CS+C + FS K + H ++ G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 5.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 862 IKAHQCNVCMMKFTNKSDLNRHMRKHDG 889
++ + C+VC +F+ K + H R H G
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 25.9 bits (56), Expect = 7.2
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 918 IKPFLCSMCAEAFSRKDHLKKHMR 941
++P+ CS+C + FS K ++ H R
Sbjct: 1 MRPYSCSVCGKRFSLKHQMETHYR 24
Score = 25.5 bits (55), Expect = 9.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 807 KPQTCEVCQKTFDKMAKFKRHLKVHDG 833
+P +C VC K F + + H +VH G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 33.3 bits (76), Expect = 0.024
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 710 DTPQEFPC--SECGKVFTRKTTLKRHVRIHTG 739
+ F C C K F R+ ++ H++ H
Sbjct: 14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 29.1 bits (65), Expect = 0.63
Identities = 10/36 (27%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 88 SEGGEGSFTC--SQCPKTFVDKWHLNRHLKSHSENK 121
E + +F C C KTF ++++ H+++H E++
Sbjct: 12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 29.1 bits (65), Expect = 0.66
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 261 KRYLCTM--CPKCFTRKDDLNRHMRNHDG 287
K + C C K F R+ ++ H++ H
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 28.3 bits (63), Expect = 1.2
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHDGIR 205
K F+C C+++F +R N+ H++ H R
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 27.5 bits (61), Expect = 2.8
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 891 KPFLCSI--CAKNFSRKDDLNRHMRKHDG 917
K F C C K F R+ ++ H++ H
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 27.1 bits (60), Expect = 3.5
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Query: 55 KKFKCNI--CPKRYARKNRLTNHLRTH 79
K F+C C K + R+ + +H++TH
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTH 43
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 32.8 bits (74), Expect = 0.025
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEK 804
PY C C R+F G L RH+R H EK
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 32.4 bits (73), Expect = 0.030
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
+KP++C C + F+ L RH++IH G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 32.4 bits (73), Expect = 0.035
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
+ C C + F L+RHVRIHTG K
Sbjct: 4 YVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 30.5 bits (68), Expect = 0.15
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDG 203
+KP+ C C F L H+RIH G
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 30.1 bits (67), Expect = 0.24
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 204 IRPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
++P+ C C F + L RH RIH G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.7 bits (66), Expect = 0.30
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 890 VKPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
+KP++C C + F+ L RH+R H G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 29.7 bits (66), Expect = 0.33
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
+KP+ C C F L H+RIHT K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.4 bits (60), Expect = 1.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIK 177
+K ++C C + F D RH+R H G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 27.0 bits (59), Expect = 3.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 807 KPQTCEVCQKTFDKMAKFKRHLKVHDG 833
KP C CQ+ F +RH+++H G
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 26.6 bits (58), Expect = 3.3
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 918 IKPFLCSMCAEAFSRKDHLKKHMR 941
+KP++C C F+ L++H+R
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVR 24
Score = 26.6 bits (58), Expect = 3.6
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 740 IKEFQCWICSKCFMEKSHLNRHLRKHSG 767
+K + C C + F + L RH+R H+G
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 25.9 bits (56), Expect = 6.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
K Y+C C + F L RH+R H G K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 25.9 bits (56), Expect = 6.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 862 IKAHQCNVCMMKFTNKSDLNRHMRKHDGVK 891
+K + C C +F + L RH+R H G K
Sbjct: 1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 25.5 bits (55), Expect = 9.5
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 317 KPHACSICTESFSQKSNLYIHLKLQHG 343
KP+ C C F+ L H+++ G
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTG 28
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 32.1 bits (72), Expect = 0.043
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIK 741
F C C KVF K +L+ H+RIHT K
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 30.2 bits (67), Expect = 0.20
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 288 LKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
K F C C + F K L HLRIHTN K
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 29.0 bits (64), Expect = 0.51
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 49 SGKKMVKKFKCNICPKRYARKNRLTNHLRTH 79
S K F C C K + K+ L HLR H
Sbjct: 2 SSGSSGKIFTCEYCNKVFKFKHSLQAHLRIH 32
Score = 28.3 bits (62), Expect = 0.93
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 176 IKPFQCSVCSESFTQRSNLNIHLRIHDG 203
K F C C++ F + +L HLRIH
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 28.3 bits (62), Expect = 0.93
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 232 IKPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
K F C C K F K L H++IH K
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 27.9 bits (61), Expect = 1.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEK 804
+ C C++ F K L HLR H NEK
Sbjct: 10 FTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.7 bits (58), Expect = 3.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 417 TVYTCEMCEKTFKYKLPLVKHCK 439
++TCE C K FK+K L H +
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLR 30
Score = 26.7 bits (58), Expect = 3.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 738 TGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
+ K F C C+K F K L HLR H+
Sbjct: 5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTN 34
Score = 26.4 bits (57), Expect = 4.6
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 890 VKPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
K F C C K F K L H+R H K
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 26.0 bits (56), Expect = 8.2
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 148 VKVFLCSVCSKTFTDKVKFNRHMRAHEGIK 177
K+F C C+K F K H+R H K
Sbjct: 7 GKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 25.6 bits (55), Expect = 9.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 810 TCEVCQKTFDKMAKFKRHLKVHDG 833
TCE C K F + HL++H
Sbjct: 11 TCEYCNKVFKFKHSLQAHLRIHTN 34
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 33.8 bits (76), Expect = 0.049
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 268 CPKC--FTRK--DDLNRHMRN-HDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
CP C TRK L +HM C C + F KA LN H ++KP
Sbjct: 27 CPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 29.9 bits (66), Expect = 1.0
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)
Query: 689 SGVEGKENEDGRRKRGKRKKGDTPQEFPCSECGKVFTRKTT--LKRHVRI-HTGIKEFQC 745
SG G + + +R ++G E C C V TRKT LK+H+ + +C
Sbjct: 3 SGSSGPGGPEEQWQRAIHERG----EAVCPTC-NVVTRKTLVGLKKHMEVCQKLQDALKC 57
Query: 746 WICSKCFMEKSHLNRHLRK 764
C K F K+ LN H
Sbjct: 58 QHCRKQFKSKAGLNYHTMA 76
Score = 29.5 bits (65), Expect = 1.6
Identities = 15/63 (23%), Positives = 18/63 (28%), Gaps = 2/63 (3%)
Query: 118 SENKVFRCEQCRFDFY-VKREYNRHMKI-HDGVKVFLCSVCSKTFTDKVKFNRHMRAHEG 175
E C C +HM++ C C K F K N H A
Sbjct: 20 HERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS 79
Query: 176 IKP 178
KP
Sbjct: 80 AKP 82
Score = 28.8 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 810 TCEVCQKTFDK-MAKFKRHLKV-HDGVRDHQCQVCGNRFKQKSNLNIHMK 857
C C K + K+H++V +CQ C +FK K+ LN H
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM 75
Score = 28.4 bits (62), Expect = 3.7
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 413 GKAKTVYTCEMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDENKA 457
K + C+ C K FK K L H +H +E+ + ++
Sbjct: 49 QKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEASEGGES 93
Score = 28.4 bits (62), Expect = 3.7
Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 740 IKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRA 799
I E +C C + L+KH V ++ C C ++F K L+ H A
Sbjct: 19 IHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQD--ALKCQHCRKQFKSKAGLNYHTMA 76
Query: 800 HENEKPEKPQTCEV 813
+ KP + E
Sbjct: 77 EHSAKPSDAEASEG 90
Score = 27.6 bits (60), Expect = 7.9
Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 149 KVFLCSVCSKTFTDKVK-FNRHM-RAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRP 206
+C C+ + +HM + +C C + F ++ LN H +P
Sbjct: 23 GEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
Score = 27.2 bits (59), Expect = 8.7
Identities = 13/44 (29%), Positives = 14/44 (31%), Gaps = 1/44 (2%)
Query: 878 SDLNRHMRK-HDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKP 920
L +HM C C K F K LN H KP
Sbjct: 39 VGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 35.9 bits (82), Expect = 0.049
Identities = 6/51 (11%), Positives = 12/51 (23%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKH 765
+ + K + H + G K Q + L +
Sbjct: 181 WYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 33.3 bits (75), Expect = 0.30
Identities = 7/49 (14%), Positives = 11/49 (22%)
Query: 237 CSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMCPKCFTRKDDLNRHMRNH 285
K H + G KR + +DL +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 32.1 bits (72), Expect = 0.72
Identities = 11/62 (17%), Positives = 19/62 (30%)
Query: 168 RHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYICFTNKSDLNRHSR 227
R +R E ++ + + S IH + G + Q N DL
Sbjct: 170 RDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
Query: 228 IH 229
+
Sbjct: 230 LS 231
Score = 32.1 bits (72), Expect = 0.74
Identities = 7/49 (14%), Positives = 12/49 (24%)
Query: 867 CNVCMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
M + + S H G K + +DL +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 32.1 bits (72), Expect = 0.81
Identities = 10/49 (20%), Positives = 13/49 (26%)
Query: 839 CQVCGNRFKQKSNLNIHMKIHEGIKAHQCNVCMMKFTNKSDLNRHMRKH 887
+ R S IH + G K Q N DL +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 31.7 bits (71), Expect = 1.0
Identities = 7/53 (13%), Positives = 14/53 (26%)
Query: 149 KVFLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
+V+ K + H G K Q + +L + +
Sbjct: 179 RVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 30.9 bits (69), Expect = 1.9
Identities = 6/62 (9%), Positives = 16/62 (25%)
Query: 112 RHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMR 171
R ++ +V+ E + + H + G K + + +
Sbjct: 170 RDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
Query: 172 AH 173
Sbjct: 230 LS 231
Score = 30.2 bits (67), Expect = 3.4
Identities = 5/55 (9%), Positives = 10/55 (18%)
Query: 263 YLCTMCPKCFTRKDDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSK 317
+ K H G K + L + + +
Sbjct: 181 WYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
Score = 29.8 bits (66), Expect = 4.5
Identities = 7/49 (14%), Positives = 15/49 (30%)
Query: 811 CEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIH 859
E K M++ H + G + Q + +L + +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 29.4 bits (65), Expect = 5.6
Identities = 7/60 (11%), Positives = 16/60 (26%)
Query: 882 RHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMCAEAFSRKDHLKKHMR 941
R +R + ++ + K H G K + + L+ +
Sbjct: 170 RDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIH 229
Score = 29.0 bits (64), Expect = 7.0
Identities = 3/37 (8%), Positives = 10/37 (27%)
Query: 702 KRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHT 738
+ R + + +V L+ + +
Sbjct: 196 ETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLSV 232
Score = 29.0 bits (64), Expect = 7.6
Identities = 7/59 (11%), Positives = 16/59 (27%), Gaps = 4/59 (6%)
Query: 742 EFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAH 800
+ W S+ +M++ H H + E ++ L +
Sbjct: 177 WLRVW-YSEDYMKRLHSMSQETIHR---NLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 31.9 bits (72), Expect = 0.054
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 233 KPFLCSM--CAKCFSRKDDLNRHMKIHE 258
+P+ C C K F R DL RH K H+
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 29.2 bits (65), Expect = 0.48
Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 891 KPFLCSI--CAKNFSRKDDLNRHMRKHD 916
+P+ C C K F R DL RH + H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.9 bits (59), Expect = 2.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 268 CPKCFTRKDDLNRHMRNHD 286
C K F R DL RH ++H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQ 29
Score = 26.5 bits (58), Expect = 4.5
Identities = 10/29 (34%), Positives = 11/29 (37%)
Query: 710 DTPQEFPCSECGKVFTRKTTLKRHVRIHT 738
D P C K F R L RH + H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 25.4 bits (55), Expect = 9.2
Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Query: 205 RPFQCNV--CYICFTNKSDLNRHSRIH 229
RP+ C+ C F DL RH + H
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSH 28
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.7 bits (71), Expect = 0.057
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
KP+ C C+ + K +LN H++ H G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 31.3 bits (70), Expect = 0.083
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
KP+ C C+ + K +LN H+RKH G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 30.6 bits (68), Expect = 0.14
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
KP++C CS + ++NLN+HLR H G
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 30.2 bits (67), Expect = 0.26
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEK 804
PY C C IK L+ HLR H EK
Sbjct: 9 PYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 29.0 bits (64), Expect = 0.57
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 741 KEFQCWICSKCFMEKSHLNRHLRKHSG 767
K ++C CS K++LN HLRKH+G
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 29.0 bits (64), Expect = 0.61
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 261 KRYLCTMCPKCFTRKDDLNRHMRNHDGLK 289
K Y C C K +LN H+R H G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 28.3 bits (62), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 919 KPFLCSMCAEAFSRKDHLKKHMRKCYG 945
KP+ C C+ A + K +L H+RK G
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 27.9 bits (61), Expect = 1.4
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSK 317
KP+ C C + KA LN+HLR HT K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.5 bits (60), Expect = 2.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 205 RPFQCNVCYICFTNKSDLNRHSRIHNGIK 233
+P++C C K++LN H R H G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 27.1 bits (59), Expect = 2.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 863 KAHQCNVCMMKFTNKSDLNRHMRKHDGVK 891
K ++C C K++LN H+RKH G K
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 26.3 bits (57), Expect = 5.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 116 SHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVK 149
S S K ++C QC + +K N H++ H G K
Sbjct: 3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 26.3 bits (57), Expect = 5.7
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIK 741
G + + + C +C K L H+R HTG K
Sbjct: 4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 31.7 bits (71), Expect = 0.057
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 489 FKCALCEKTFVRKQTLDRHVTVH 511
+KC LCE++FV K L RH VH
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVH 24
Score = 31.3 bits (70), Expect = 0.077
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHEN 802
Y C +C+R F K LSRH R H+N
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
Score = 28.2 bits (62), Expect = 0.95
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 743 FQCWICSKCFMEKSHLNRHLRKHS 766
++C +C + F+EKS L+RH R H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 27.8 bits (61), Expect = 1.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 207 FQCNVCYICFTNKSDLNRHSRIHN 230
++C +C F KS L+RH R+H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 26.3 bits (57), Expect = 4.9
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 179 FQCSVCSESFTQRSNLNIHLRIHD 202
++C +C SF ++S L+ H R+H
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHK 25
Score = 25.9 bits (56), Expect = 5.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 291 FHCSVCFESFTQKALLNIHLRIHTN 315
+ C +C SF +K+ L+ H R+H N
Sbjct: 2 YKCGLCERSFVEKSALSRHQRVHKN 26
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 30.9 bits (69), Expect = 0.094
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
KP QC +C ++FTQ S+L H+R H G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 29.3 bits (65), Expect = 0.34
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHDGIK 919
KP C +C K F++ L H+R+H G K
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 29.3 bits (65), Expect = 0.37
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 717 CSECGKVFTRKTTLKRHVRIHTGIK 741
C CGK FT+ ++L HVR HTG K
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 28.2 bits (62), Expect = 1.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 289 KPFHCSVCFESFTQKALLNIHLRIHTNSK 317
KP C +C ++FTQ + L H+R HT K
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 28.2 bits (62), Expect = 1.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 741 KEFQCWICSKCFMEKSHLNRHLRKHSG 767
K QC +C K F + S L H+R+H+G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
Score = 27.8 bits (61), Expect = 1.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 233 KPFLCSMCAKCFSRKDDLNRHMKIHEGSK 261
KP C MC K F++ L H++ H G K
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.3 bits (57), Expect = 4.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 264 LCTMCPKCFTRKDDLNRHMRNHDGLK 289
C MC K FT+ L H+R H G K
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 26.3 bits (57), Expect = 5.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 838 QCQVCGNRFKQKSNLNIHMKIHEGIK 863
QC +CG F Q S+L H++ H G K
Sbjct: 4 QCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.9 bits (56), Expect = 7.4
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHENEK 804
P C +C + FT L H+R H EK
Sbjct: 2 PCQCVMCGKAFTQASSLIAHVRQHTGEK 29
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 32.9 bits (74), Expect = 0.095
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Query: 268 CPKC--FTRK--DDLNRHMRNHDGLKPFHCSVCFESFTQKALLNIHLRIHTNSKP 318
CP C RK + L +HM N + F C C + A + H+ + NS P
Sbjct: 37 CPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 31.0 bits (69), Expect = 0.46
Identities = 11/63 (17%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 118 SENKVFRCEQCR-FDFYVKREYNRHMKIHDGVKVFLCSVCSKTFTDKVKFNRHMRAHEGI 176
+ C C+ +HM+ ++F C C K H+ A+
Sbjct: 30 VDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS 88
Query: 177 KPF 179
P
Sbjct: 89 LPS 91
Score = 28.7 bits (63), Expect = 2.7
Identities = 9/49 (18%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Query: 810 TCEVCQK-TFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMK 857
+C CQ + K+H++ C CG + + + + H+
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVM 83
Score = 28.3 bits (62), Expect = 3.7
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 4/76 (5%)
Query: 735 RIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLS 794
+ + I + C C L+KH + + C C ++ +
Sbjct: 24 QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENCK----QEMFTCHHCGKQLRSLAGMK 79
Query: 795 RHLRAHENEKPEKPQT 810
H+ A+ N P P +
Sbjct: 80 YHVMANHNSLPSGPSS 95
Score = 28.3 bits (62), Expect = 4.3
Identities = 11/56 (19%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Query: 867 CNVC-MMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPF 921
C C + L +HM + F C C K + H+ + P
Sbjct: 37 CPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS 91
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 31.4 bits (70), Expect = 0.098
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 704 GKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTG 739
G T E C ECGK+F + L H +H G
Sbjct: 4 GSSGAAKTTSE--CQECGKIFRHSSLLIEHQALHAG 37
Score = 27.2 bits (59), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 413 GKAKTVYTCEMCEKTFKYKLPLVKH 437
G AKT C+ C K F++ L++H
Sbjct: 7 GAAKTTSECQECGKIFRHSSLLIEH 31
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 31.9 bits (72), Expect = 0.13
Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
Query: 793 LSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNL 852
S H E E P + C+ C + K K H + G R C CG K +L
Sbjct: 5 SSGHE---ETECPLRLAVCQHCDLEL-SILKLKEHED-YCGARTELCGNCGRNVLVK-DL 58
Query: 853 NIHMKIHEGIKA 864
H ++ +
Sbjct: 59 KTHPEVCGREGS 70
>1sig_A Sigma70, RNA polymerase primary sigma factor; RNA polymerase sigma
factor, transcription regulation; 2.60A {Escherichia
coli} SCOP: a.177.1.1
Length = 339
Score = 34.5 bits (79), Expect = 0.14
Identities = 10/59 (16%), Positives = 24/59 (40%)
Query: 10 YVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYAR 68
+VD N EE + S++ D+++++ E D + + +++A
Sbjct: 56 FVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAREKFAE 114
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion,
acrosom; 2.62A {Homo sapiens}
Length = 126
Score = 32.8 bits (75), Expect = 0.18
Identities = 15/100 (15%), Positives = 27/100 (27%), Gaps = 25/100 (25%)
Query: 95 FTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCS 154
F C C + ++ +K C+ C + C
Sbjct: 31 FCCFDCDSILAGEIYVMV------NDKPV-CKPCYVKNHAVV----------------CQ 67
Query: 155 VCSKTFTDKVKFNRHMRA--HEGIKPFQCSVCSESFTQRS 192
C +V+ + H + F CS CS+ +
Sbjct: 68 GCHNAIDPEVQRVTYNNFSWHASTECFLCSCCSKCLIGQK 107
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Length = 32
Score = 29.3 bits (65), Expect = 0.47
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 921 FLCSMCAEAFSRKDHLKKHMRKCY 944
F C C + F R D L KH++ +
Sbjct: 3 FACPACPKRFMRSDALSKHIKTAF 26
Score = 28.9 bits (64), Expect = 0.64
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 57 FKCNICPKRYARKNRLTNHLRT 78
F C CPKR+ R + L+ H++T
Sbjct: 3 FACPACPKRFMRSDALSKHIKT 24
Score = 28.5 bits (63), Expect = 0.78
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 94 SFTCSQCPKTFVDKWHLNRHLKS 116
+F C CPK F+ L++H+K+
Sbjct: 2 AFACPACPKRFMRSDALSKHIKT 24
Score = 28.1 bits (62), Expect = 1.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 743 FQCWICSKCFMEKSHLNRHLRKHSGVV 769
F C C K FM L++H++ VV
Sbjct: 3 FACPACPKRFMRSDALSKHIKTAFIVV 29
Score = 26.2 bits (57), Expect = 4.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 715 FPCSECGKVFTRKTTLKRHVR 735
F C C K F R L +H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 26.2 bits (57), Expect = 5.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 893 FLCSICAKNFSRKDDLNRHMR 913
F C C K F R D L++H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.8 bits (56), Expect = 8.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 235 FLCSMCAKCFSRKDDLNRHMK 255
F C C K F R D L++H+K
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
Score = 25.8 bits (56), Expect = 8.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 263 YLCTMCPKCFTRKDDLNRHMR 283
+ C CPK F R D L++H++
Sbjct: 3 FACPACPKRFMRSDALSKHIK 23
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 66
Score = 29.8 bits (66), Expect = 0.72
Identities = 11/23 (47%), Positives = 13/23 (56%)
Query: 715 FPCSECGKVFTRKTTLKRHVRIH 737
PC CGKVFT L++H H
Sbjct: 14 LPCGLCGKVFTDANRLRQHEAQH 36
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.1 bits (69), Expect = 0.87
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 13/41 (31%)
Query: 495 EKTFVRKQTLDRHVTVHGITGAEHDEIMGESNPATAQVNAS 535
EK ++K L + ++ A+ +S PA A + A+
Sbjct: 18 EKQALKK--LQASLKLY----AD------DSAPALA-IKAT 45
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 28.6 bits (63), Expect = 0.88
Identities = 15/36 (41%), Positives = 17/36 (47%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHEAGSGDEKSEG 90
K FKCN C K ++ LT H R H G S G
Sbjct: 11 KCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG 46
Score = 28.6 bits (63), Expect = 0.96
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHT 738
G + F C++C K F+ L +H RIHT
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 27.1 bits (59), Expect = 3.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 229 HNGIKPFLCSMCAKCFSRKDDLNRHMKIH 257
K F C+ C K FS L +H +IH
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.3 bits (57), Expect = 7.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 172 AHEGIKPFQCSVCSESFTQRSNLNIHLRIH 201
+ + K F+C+ C ++F+ L H RIH
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
Score = 26.3 bits (57), Expect = 7.6
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 887 HDGVKPFLCSICAKNFSRKDDLNRHMRKH 915
K F C+ C K FS L +H R H
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIH 35
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain,
PRMT3, structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus musculus}
SCOP: g.37.1.5
Length = 121
Score = 30.3 bits (68), Expect = 1.1
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 420 TCEMCEKTFKYKLPLVKHCKKQHQVDLEMSESEDE 454
C C++ F HCK +HQ +++ +
Sbjct: 17 PCLFCDRLFASAEETFSHCKLEHQFNIDSMVHKHG 51
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 27.7 bits (61), Expect = 1.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 891 KPFLCSICAKNFSRKDDLNRHMRKHD 916
KP++C C K F + L H+R HD
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
Score = 27.0 bits (59), Expect = 2.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 777 PYACSICDRKFTIKGQLSRHLRAHE 801
PY C C ++F QL+ H+R H+
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHHD 26
Score = 27.0 bits (59), Expect = 2.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHD 202
KP+ C C + F Q S L H+R HD
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
Score = 26.6 bits (58), Expect = 4.0
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTHE 80
K + C C KR+ + ++L NH+R H+
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHHD 26
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 27
Score = 27.8 bits (61), Expect = 1.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 55 KKFKCNICPKRYARKNRLTNHLRTH 79
K F C++CP+R + +T HLRTH
Sbjct: 2 KPFSCSLCPQRSRDFSAMTKHLRTH 26
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 28.2 bits (62), Expect = 1.4
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIK 741
G + C ECG++F + +L H +H G K
Sbjct: 7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 28.2 bits (62), Expect = 1.5
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 835 RDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQ 866
+ HQC+ CG F Q +L H +H G K
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
Score = 27.9 bits (61), Expect = 2.0
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHDG 203
K QC C E F Q +L H +H G
Sbjct: 11 KSHQCRECGEIFFQYVSLIEHQVLHMG 37
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc
finger, gene regulation; NMR {Agrobacterium tumefaciens}
Length = 87
Score = 29.1 bits (65), Expect = 1.6
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Query: 707 KKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIK 741
+K C ECG F +LKRH+ H +
Sbjct: 14 RKSVQDDHIVCLECGGSF---KSLKRHLTTHHSMT 45
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 29.9 bits (66), Expect = 1.8
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 11/96 (11%)
Query: 801 ENEKPEKPQTCEVCQKTFDKMAKFKRHL-------KVHDGVRDHQCQVCGNRFKQKSNLN 853
EN C+VC ++ H KV + +Q + K K+
Sbjct: 25 ENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPA 84
Query: 854 IHMKIHEGIKAHQCNVCMMKFTNKSDLNRHM--RKH 887
+ ++ C VC M F++ H + H
Sbjct: 85 EISDGED--RSKCCPVCNMTFSSPVVAESHYIGKTH 118
Score = 29.5 bits (65), Expect = 2.5
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 5/85 (5%)
Query: 862 IKAHQCNVCMMKFTNKSDLNRHM--RKHDG-VKPFLCSICAKNFSRKDDLNRHMRKHDGI 918
QC VC ++S H RKH V+ ++ ++ +
Sbjct: 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG 89
Query: 919 --KPFLCSMCAEAFSRKDHLKKHMR 941
+ C +C FS + H
Sbjct: 90 EDRSKCCPVCNMTFSSPVVAESHYI 114
Score = 29.5 bits (65), Expect = 2.7
Identities = 13/94 (13%), Positives = 23/94 (24%), Gaps = 9/94 (9%)
Query: 232 IKPFLCSMCAKCFSRKDDLNRHM--KIHEGS-KRYLCTMCPKCFTRKDDLNRHMRNHDGL 288
C +C+ + H + H +RY+ +
Sbjct: 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG 89
Query: 289 --KPFHCSVCFESFTQKALLNIHLRIHTNSKPHA 320
+ C VC +F+ H K H
Sbjct: 90 EDRSKCCPVCNMTFSSPV----VAESHYIGKTHI 119
Score = 29.2 bits (64), Expect = 3.7
Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 12/119 (10%)
Query: 390 PGAASLGNKRGKAAASQKKETGKGKAKTVYTCEMCEKTFKYKLPLVKHCK-KQHQVDLEM 448
+L GK A + C++C + + H + ++H +
Sbjct: 5 GNGDALDLPVGKDAVNSLIRENSHIFSDTQ-CKVCSAVLISESQKLAHYQSRKHANKVRR 63
Query: 449 SESEDENKASVNTAKVKKESVEGVSMEGKSLSEFSGPVGNFKCALCEKTFVRKQTLDRH 507
+ ++ + SV K K E E + + C +C TF + H
Sbjct: 64 YMAINQGEDSVPAKKFKAAPAEISDGEDR----------SKCCPVCNMTFSSPVVAESH 112
Score = 28.0 bits (61), Expect = 9.2
Identities = 15/89 (16%), Positives = 26/89 (29%), Gaps = 7/89 (7%)
Query: 204 IRPFQCNVCYICFTNKSDLNRH--SRIH-NGIKPFLCSMCAKCFSRKDDLNRHMKIHEGS 260
QC VC ++S H SR H N ++ ++ +
Sbjct: 30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG 89
Query: 261 --KRYLCTMCPKCFTRKDDLNRHM--RNH 285
+ C +C F+ H + H
Sbjct: 90 EDRSKCCPVCNMTFSSPVVAESHYIGKTH 118
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha,
coiled coil, cytoplasm, metal- binding, UBL conjugation,
UBL conjugation pathway; 2.20A {Homo sapiens}
Length = 170
Score = 30.4 bits (68), Expect = 1.9
Identities = 24/151 (15%), Positives = 37/151 (24%), Gaps = 6/151 (3%)
Query: 709 GDTPQEFPCSECGKVFTR-KTTLKRHVRIHTGIKEFQCWICSKCFMEKSHLNRHLRKHSG 767
++ C C T H I + KC ++ L +
Sbjct: 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDN 72
Query: 768 VVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRH 827
C ++ RHL H+ C CQ+ F K H
Sbjct: 73 FAKREILSLMVKCPNEGCLHKMEL---RHLEDHQAHCEFALMDCPQCQRPFQKF-HINIH 128
Query: 828 LKVHDGVRDHQCQVCGNRFKQKSNLNIHMKI 858
+ R C C + IH +
Sbjct: 129 ILKDCPRRQVSCDNCAASM-AFEDKEIHDQN 158
Score = 28.5 bits (63), Expect = 8.7
Identities = 17/125 (13%), Positives = 35/125 (28%), Gaps = 7/125 (5%)
Query: 92 EGSFTCSQCPKTF-VDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKV 150
+ C + ++ + K + + +C ++ + + H +
Sbjct: 51 DAGHKCPVDNEILLENQLFPDNFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFAL 110
Query: 151 FLCSVCSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCN 210
C C + F K N H+ + C C+ S IHD P
Sbjct: 111 MDCPQCQRPFQ-KFHINIHILKDCPRRQVSCDNCAASMAFED-----KEIHDQNCPLALE 164
Query: 211 VCYIC 215
+
Sbjct: 165 HHHHH 169
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 31.0 bits (69), Expect = 2.0
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 8/73 (10%)
Query: 788 TIKGQLSRHLRAHENEKPEKPQTCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFK 847
IK K C C + F + F+ HL + H+ N K
Sbjct: 272 LIKSDFEHSYCRGSLRSEAKGIYCPFCSRWFKTSSVFESHLV----GKIHK----KNESK 323
Query: 848 QKSNLNIHMKIHE 860
+++ + K+H
Sbjct: 324 RRNFVYSEYKLHR 336
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 27.4 bits (61), Expect = 2.6
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 778 YACSICDRKFTIKGQLSRHLRAHENEK 804
Y CS C R+F L H+ H ++
Sbjct: 7 YTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 26.3 bits (58), Expect = 5.7
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 485 PVGNFKCALCEKTFVRKQTLDRHVTVH 511
P ++ C+ C++ F Q L H+ VH
Sbjct: 3 PPRSYTCSFCKREFRSAQALGGHMNVH 29
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation
domain, Zn finger, DNA-binding regulatory protein; NMR
{Homo sapiens} SCOP: g.37.1.1
Length = 38
Score = 27.3 bits (60), Expect = 2.7
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 177 KPFQCSV--CSESFTQRSNLNIHLRIHD 202
KPF C+ C + FT +L +H H+
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHKHE 32
Score = 25.8 bits (56), Expect = 7.8
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 919 KPFLCSM--CAEAFSRKDHLKKHMRK 942
KPFLC+ C + F+ +DHL H K
Sbjct: 5 KPFLCTAPGCGQRFTNEDHLAVHKHK 30
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger,
zinc-binding protein, heterodimer, ubiquitin ligase,
antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Length = 112
Score = 28.9 bits (65), Expect = 3.0
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 14/61 (22%)
Query: 151 FLCSVCSKTFTDKVK-----------FNRHMRAHEGIKPFQCSVCSESFTQRS-NLNIHL 198
C +C + + V + + +G P QC +C T+RS +
Sbjct: 22 LECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKG--PSQCPLCKNDITKRSLQESTRF 79
Query: 199 R 199
Sbjct: 80 S 80
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 29.7 bits (66), Expect = 3.1
Identities = 10/65 (15%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 631 EERPAPKKRGRKKGVPTRRKSTGSRKSAKSDVD--TTDYESAMDTDYVDDNEASE----- 683
EE+ +KR ++ ++ R+ AK D++ ++ + +N ++
Sbjct: 92 EEQ---RKRLQELDAASKVMEQEWREKAKKDLEEWNQRQSEQVEKN-KINNRIADKAFYQ 147
Query: 684 SRNED 688
+ D
Sbjct: 148 QPDAD 152
Score = 29.4 bits (65), Expect = 4.0
Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 21/70 (30%)
Query: 15 EEESKDIEKLVIEESASEDSDDEEDEDFENDENSSGKKMVKKFKCNICPKRYA---RKNR 71
EE+ K +++L D + E + KK ++++ +R + KN+
Sbjct: 92 EEQRKRLQEL-----------DAASKVMEQEWREKAKKDLEEWN-----QRQSEQVEKNK 135
Query: 72 LTNHLRTHEA 81
+ N R +
Sbjct: 136 INN--RIADK 143
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 27.4 bits (60), Expect = 3.1
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 55 KKFKCNICPKRYARKNRLTNHLR-THEAGSGDEKSEGGE 92
K + C+IC KRY + L+ H +H A E E +
Sbjct: 6 KPYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQ 44
>3gox_A Restriction endonuclease HPY99I; endonuclease-DNA complex,
restriction enzyme, HPY99I, pseudopalindrome; HET: 1PE;
1.50A {Helicobacter pylori} PDB: 3fc3_A*
Length = 200
Score = 29.9 bits (66), Expect = 3.2
Identities = 17/101 (16%), Positives = 29/101 (28%), Gaps = 8/101 (7%)
Query: 747 ICSKCFMEKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPE 806
IC+ C + K+ + + + P C C + S + + P
Sbjct: 77 ICNICHILKNTDGFEINQTDA--KGRKTTRPS-CRECRKNIDGVKLSSTEKKKMDEIAPP 133
Query: 807 KPQT--CEVCQKTFDKMAKFKR---HLKVHDGVRDHQCQVC 842
K C +C+K H R+ C C
Sbjct: 134 KGSVFTCPICEKRSIVGVTANLVHDHNHDTGWGREWICDSC 174
>2ecv_A Tripartite motif-containing protein 5; metal binding protein,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 85
Score = 28.4 bits (64), Expect = 3.3
Identities = 10/64 (15%), Positives = 19/64 (29%), Gaps = 17/64 (26%)
Query: 151 FLCSVCSKTFTDKV--------------KFNRHMRAHEGIKPFQCSVCSESFTQRS-NLN 195
C +C + T + ++ +G C VC S+ + N
Sbjct: 20 VTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKG--ESSCPVCRISYQPENIRPN 77
Query: 196 IHLR 199
H+
Sbjct: 78 RHVA 81
>1ryl_A Hypothetical protein YFBM; structural genomics, PSI, protein
structure initiative, midwest center for structural
genomics, MCSG; 1.60A {Escherichia coli} SCOP:
d.276.1.1
Length = 167
Score = 29.6 bits (66), Expect = 3.6
Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
Query: 4 MSMMGKYVDANEEESKDIEKLVIEESASEDSDDEEDEDFENDENS 48
M M+G + + + E+ I +L+ E ++ ++ + +
Sbjct: 1 MGMIGYFAEIDSEK---INQLL------ESTEKPLMDNIHDTLSG 36
>1gjj_A LAP2; inner nuclear membrane protein, lamin-associated polypeptide,
LEM domain, multidimensional dipolar couplings; NMR
{Homo sapiens} SCOP: a.140.1.1 a.140.1.1 PDB: 1h9e_A
1h9f_A
Length = 168
Score = 29.6 bits (65), Expect = 3.6
Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 572 QEPDSIVKEEMLSDYDDNDNSMMTATQDDDD----EPFQSEVENDDDDVPLSKRTSYYAS 627
++P + K+++ S+ N+ ++ Q D N +
Sbjct: 6 EDPSVLTKDKLKSELVANNVTLPAGEQRKDVYVQLYLQHLTARNRPPLPAGTNSKGPPDF 65
Query: 628 SADEERPAPKKRGRKKGVPTRRKSTGSRKS-AKSDVDTTDYESAMDTDYVDDNE 680
S+DEER G R ++ RK+ K+D + + +D + + +
Sbjct: 66 SSDEEREPTPVLGSGAAAAGRSRAAVGRKATKKTDKPRQEDKDDLDVTELTNED 119
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron
transfer, Fe reduction, GEO sulfurreducens; HET: HEM;
3.20A {Geobacter sulfurreducens}
Length = 318
Score = 30.0 bits (65), Expect = 3.8
Identities = 25/173 (14%), Positives = 44/173 (25%), Gaps = 18/173 (10%)
Query: 96 TCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMKIHDGVKVFLCSV 155
F K + +++C +C + + + + D K C
Sbjct: 161 MTPPKTVNFKMKGVADAAFSHEFHLGMYKCNECHTKLFAYKAGAKRFTMADMDKGKSCGA 220
Query: 156 CSKTFTDKVKFNRHMRAHEGIKPFQCSVCSESFTQRSNLNIHLRIHDGIRPFQCNVCYIC 215
C + + H G+KP + + + + +IHL + C C
Sbjct: 221 CHNGKDAFSSASDCGKCHPGLKPAKLTYKTSVGEAYFDHDIHLSMFK---------CADC 271
Query: 216 FTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLCTMC 268
T + S C C H S C C
Sbjct: 272 HTKVFKYRKGSAPATMADMEKGKSCGVC---------HNGKDAFSVADDCVKC 315
Score = 30.0 bits (65), Expect = 4.4
Identities = 19/117 (16%), Positives = 32/117 (27%), Gaps = 6/117 (5%)
Query: 810 TCEVCQKTFDKMAKFKRHLKVHDGVRDHQCQVCGNRFKQKSNLNIHMKIHEGIKAHQCNV 869
C C + + D + C C N S+ + K H G+K +
Sbjct: 189 KCNECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGLKPAKLTY 248
Query: 870 CMMKFTNKSDLNRHMRKHDGVKPFLCSICAKNFSRKDDLNRHMRKHDGIKPFLCSMC 926
D + H+ C+ C + + D K C +C
Sbjct: 249 KTSVGEAYFDHDIHLSMFK------CADCHTKVFKYRKGSAPATMADMEKGKSCGVC 299
>3nzj_F Proteasome component C1; ubiquitin, protein degradation, N-terminal
nucleophilic HYDR 19S regulatory particle; HET: TY5 TRO
MES; 2.40A {Saccharomyces cerevisiae} PDB: 1z7q_G*
3nzw_F* 3nzx_F* 3un4_F* 3un8_F* 3bdm_F* 1fnt_G* 2zcy_F*
Length = 288
Score = 29.6 bits (67), Expect = 4.4
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 15 EEESKDIEKLVIEESASEDSDDEEDEDFENDENSSG 50
+ ++ +E +D +DE+D D +
Sbjct: 233 GDLLQEAIDFAQKEINGDDDEDEDDSDNVMSSDDEN 268
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 37
Score = 26.7 bits (58), Expect = 4.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 861 GIKAHQCNVCMMKFT-NKSDLNRHMRKHDGVK 891
+A +C C F N SDL RH+ H+GVK
Sbjct: 6 SGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK 37
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite
motif protein 34, interferon- responsive finger protein
1; NMR {Homo sapiens}
Length = 79
Score = 27.6 bits (62), Expect = 4.9
Identities = 12/64 (18%), Positives = 19/64 (29%), Gaps = 16/64 (25%)
Query: 151 FLCSVCSKTFTDKV--------------KFNRHMRAHEGIKPFQCSVCSESFTQRS-NLN 195
C +C + T+ + N+ G C VC S++ N
Sbjct: 13 VTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMG-GKSSCPVCGISYSFEHLQAN 71
Query: 196 IHLR 199
HL
Sbjct: 72 QHLA 75
>3h0g_F DNA-directed RNA polymerases I, II, and III subunit rpabc2;
transcription, multi-protein complex, DNA- binding,
magnesium; 3.65A {Schizosaccharomyces pombe}
Length = 142
Score = 28.9 bits (64), Expect = 5.4
Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 583 LSDYDDNDNSMM-TATQDDDDEPFQSEVENDDDDVPLSKRTSYYASSADEERPAPKKRGR 641
+SDY++++ M A +++ + + EN +S + E+ + K
Sbjct: 1 MSDYEEDEAFGMDGAVMEEEVDELEMIDENGQSQQGVSHPGEPSTTVITEDVASSKTAQS 60
Query: 642 KKGVPTRRKST 652
K V ++T
Sbjct: 61 GKAVAKEDRTT 71
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron
transfer, DIIR center, oxidoreductase; 1.40A
{Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1
PDB: 1yv1_A 1yux_A
Length = 202
Score = 29.3 bits (65), Expect = 5.6
Identities = 16/133 (12%), Positives = 33/133 (24%), Gaps = 29/133 (21%)
Query: 754 EKSHLNRHLRKHSGVVDNMEAEAPYACSICDRKFTIKGQLSRHLRAHENEKPEKPQTCE- 812
E H+ + + E A S + + + + P + +
Sbjct: 73 ELIHIGLEYALVAEMEPGYEKPTVAAPSAYSCDLNLISGANGEIYETSDMYPAFIRKAQE 132
Query: 813 ----VCQKTFDKMAKF-KRHLKVHDGVRDH----------QCQVCGNRFKQKSNLNIHMK 857
F + H + + + C +CG
Sbjct: 133 EGNSKAVHVFTRAKLAESVHAERYLAAYNDIDAPDDDKFHLCPICGY------------- 179
Query: 858 IHEGIKAHQCNVC 870
IH+G +C +C
Sbjct: 180 IHKGEDFEKCPIC 192
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.3 bits (57), Expect = 6.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 709 GDTPQEFPCSECGKVFTRKTTLKRHVRIHT 738
G + + C CGK F K TLK H +HT
Sbjct: 4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHT 33
>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein,
C2H2 type zinc-finger, structural genomics; NMR {Mus
musculus} SCOP: g.37.1.2 g.37.1.2
Length = 79
Score = 27.1 bits (60), Expect = 7.0
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 94 SFTCSQCPKTFVDKWHLNRHLKSHSENKVFRCEQCRFDFYVKREYNRHMK 143
FTC+ C ++ V K + +H+ + + C C DF+ +Y H+K
Sbjct: 10 FFTCNACGES-VKKIQVEKHVSNCRNCECLSCIDCGKDFW-GDDYKSHVK 57
>1rm1_C Transcription initiation factor IIA large chain; yeast TFIIA, TBP
protein, ATA-box DNA, transcription/DNA complex; 2.50A
{Saccharomyces cerevisiae}
Length = 286
Score = 29.1 bits (63), Expect = 7.1
Identities = 9/105 (8%), Positives = 32/105 (30%)
Query: 511 HGITGAEHDEIMGESNPATAQVNASETSGDLNTSLAPSDGTIPEIDINKSDTGNMYIVTP 570
+G + ++ + + T++ D + D + +
Sbjct: 134 TNTSGNTNADVTSQPKIEVKPEIELTINNANITTVENIDDESEKKDDEEKEEDVEKTRKE 193
Query: 571 KQEPDSIVKEEMLSDYDDNDNSMMTATQDDDDEPFQSEVENDDDD 615
K++ + + + ++ ++ DD + E ++D
Sbjct: 194 KEQIEQVKLQAKKEKRSALLDTDEVGSELDDSDDDYLISEGEEDG 238
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.0 bits (56), Expect = 8.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 177 KPFQCSVCSESFTQRSNLNIHLRIHD 202
KPF+CS+C + +SNL H+ H
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNRHS 33
Score = 25.6 bits (55), Expect = 9.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 919 KPFLCSMCAEAFSRKDHLKKHMRK 942
KPF CS+C A K +LK HM +
Sbjct: 8 KPFKCSLCEYATRSKSNLKAHMNR 31
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle
transport, cytoplasm, endoplasmic reticulum, ER-golgi
transport, golgi apparatus; 2.35A {Homo sapiens}
Length = 766
Score = 29.5 bits (65), Expect = 8.1
Identities = 11/67 (16%), Positives = 21/67 (31%), Gaps = 6/67 (8%)
Query: 206 PFQCNVCYICFTNKSDLNRHSRIHNGIKPFLCSMCAKCFSRKDDLNRHMKIHEGSKRYLC 265
P + + + + + H P C+ C + M+ EG +R+ C
Sbjct: 66 PLAAVIKPLARLPPEEASPYVVDHGESGPLRCNRCKAY------MCPFMQFIEGGRRFQC 119
Query: 266 TMCPKCF 272
C
Sbjct: 120 CFCSCIN 126
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 73
Score = 26.9 bits (60), Expect = 8.1
Identities = 8/53 (15%), Positives = 15/53 (28%), Gaps = 13/53 (24%)
Query: 151 FLCSVCSKTFTDKVK-----------FNRHMRAHEGIKPFQCSVCSESFTQRS 192
+C +C V + G F+C +C S + +
Sbjct: 21 VICPICLDILQKPVTIDCGHNFCLKCITQIGETSCG--FFKCPLCKTSVRKNA 71
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 28.5 bits (63), Expect = 8.9
Identities = 9/53 (16%), Positives = 16/53 (30%), Gaps = 14/53 (26%)
Query: 701 RKRGKRKKGDTPQEFPCSECGKVFTRKTTLKRHVRIHTGIKEFQC--WICSKC 751
KR R+ + C EC + ++ F +C+ C
Sbjct: 8 DKRAGRRGPNLNIVLTCPECK---VYPPKI---------VERFSEGDVVCALC 48
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.131 0.399
Gapped
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 15,284,930
Number of extensions: 914213
Number of successful extensions: 7666
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6359
Number of HSP's successfully gapped: 2879
Length of query: 1043
Length of database: 6,701,793
Length adjustment: 103
Effective length of query: 940
Effective length of database: 3,825,930
Effective search space: 3596374200
Effective search space used: 3596374200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.3 bits)