RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13412
(137 letters)
>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 275
Score = 40.2 bits (93), Expect = 2e-05
Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 18/74 (24%)
Query: 65 PGANITNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCA- 123
+ A PG V T+++ KSP +GA+T +Y A
Sbjct: 212 EQRKGDKILLNACCPGWVRTDMAGP-----------------KATKSPEEGAETPVYLAL 254
Query: 124 LDKKCERETGLYYA 137
L E G + +
Sbjct: 255 LPPDAEGPHGQFVS 268
>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly
(Drosophila lebanonensis) [TaxId: 7225]}
Length = 254
Score = 32.7 bits (74), Expect = 0.008
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCA 123
T V Y+++PG+ T L F+S + + + + ++ Q Q +
Sbjct: 172 TGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAI 225
>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI
{Human (Homo sapiens) [TaxId: 9606]}
Length = 244
Score = 31.1 bits (70), Expect = 0.029
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 68 NITNVNTYAVHPGVVDTELSRH 89
IT V T + P V+T ++
Sbjct: 178 QITGVKTTCLCPNFVNTGFIKN 199
>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 30.5 bits (68), Expect = 0.053
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIP 95
NV+ G++DTE + S I
Sbjct: 186 VNVSITLCVLGLIDTETAMKAVSGIV 211
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer
{Caenorhabditis elegans [TaxId: 6239]}
Length = 250
Score = 29.8 bits (66), Expect = 0.077
Identities = 11/40 (27%), Positives = 13/40 (32%), Gaps = 2/40 (5%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIP--GTAWLYQRVGGL 107
NV PG V T L ++ TA L L
Sbjct: 193 DNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKL 232
>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 264
Score = 28.8 bits (64), Expect = 0.20
Identities = 9/47 (19%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Query: 68 NITNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 114
I VN ++ PG+V T + Y + + P
Sbjct: 183 GIR-VN--SISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG 226
>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 237
Score = 28.5 bits (63), Expect = 0.25
Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 54 NHYCKNVLFHPPGANITNVNTYAVHPGVVDTELSRHFD 91
+++ AN+T V PG +DT+++R D
Sbjct: 153 IGMARSIARELSKANVTAN---VVAPGYIDTDMTRALD 187
>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase
{Chlorobium tepidum [TaxId: 1097]}
Length = 240
Score = 28.2 bits (62), Expect = 0.26
Identities = 11/58 (18%), Positives = 15/58 (25%), Gaps = 11/58 (18%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCALDKK 127
NV V PG V T + D + + P A + L
Sbjct: 178 CNVRITDVQPGAVYTPMWGKVDDEMQA-----------LMMMPEDIAAPVVQAYLQPS 224
>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 274
Score = 28.1 bits (62), Expect = 0.30
Identities = 10/45 (22%), Positives = 14/45 (31%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 114
V +V PG V T + LY +G P+
Sbjct: 179 HGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG 223
>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 259
Score = 28.2 bits (62), Expect = 0.33
Identities = 4/21 (19%), Positives = 10/21 (47%)
Query: 70 TNVNTYAVHPGVVDTELSRHF 90
+V + PG +D ++ +
Sbjct: 188 PSVRVLSYAPGPLDNDMQQLA 208
>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 28.0 bits (62), Expect = 0.33
Identities = 7/28 (25%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Query: 68 NITNVNTYAVHPGVVDTELSRHFDSIIP 95
+ VN + PG + T L +++P
Sbjct: 173 GVR-VN--CISPGNIWTPLWEELAALMP 197
>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 27.2 bits (60), Expect = 0.55
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIP 95
T++ + PGVV+T+ + P
Sbjct: 188 THIRATCISPGVVETQFAFKLHDKDP 213
>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 272
Score = 26.9 bits (59), Expect = 0.73
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQ 114
+ +V PG+V+T + + Y + P+
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG 226
>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase,
PGDH {Human (Homo sapiens) [TaxId: 9606]}
Length = 254
Score = 26.9 bits (59), Expect = 0.74
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 70 TNVNTYAVHPGVVDTELSRHFD 91
+ V A+ PG V+T + +
Sbjct: 172 SGVRLNAICPGFVNTAILESIE 193
>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus
thermophilus [TaxId: 274]}
Length = 248
Score = 26.0 bits (57), Expect = 1.6
Identities = 10/37 (27%), Positives = 14/37 (37%), Gaps = 3/37 (8%)
Query: 68 NITNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 104
I VN AV PG + TE ++ P +
Sbjct: 170 RIR-VN--AVAPGAIATEAVLEAIALSPDPERTRRDW 203
>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 244
Score = 25.8 bits (56), Expect = 1.9
Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
Query: 71 NVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRVGGLFIKSPLQGAQTTLYCALDK 126
+ ++HPG+V T ++ I TA R P++ + +Y A D+
Sbjct: 174 GIRVNSIHPGLVKTPMTDWVPEDIFQTAL--GRAA-----EPVEVSNLVVYLASDE 222
>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 252
Score = 25.8 bits (56), Expect = 2.0
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 70 TNVNTYAVHPGVVDTELSRHF 90
N+ +A+ P + +E S +F
Sbjct: 165 YNIPVFAIGPNYLHSEDSPYF 185
>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum
[TaxId: 144185]}
Length = 258
Score = 25.9 bits (56), Expect = 2.0
Identities = 4/21 (19%), Positives = 9/21 (42%)
Query: 70 TNVNTYAVHPGVVDTELSRHF 90
+ A+ PG + T + +
Sbjct: 177 YGIRINAIAPGAIWTPMVENS 197
>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase
{Pseudomonas fragi [TaxId: 296]}
Length = 260
Score = 25.5 bits (55), Expect = 2.4
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIP 95
+ A+ PG V T L S +
Sbjct: 176 QGITANAICPGWVRTPLVEKQISALA 201
>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase
{Azoarcus sp. ebn1 [TaxId: 76114]}
Length = 247
Score = 25.2 bits (55), Expect = 2.6
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
Query: 68 NITNVNTYAVHPGVVDTELSR 88
IT VN A+ P +V T +
Sbjct: 174 GIT-VN--AIAPSLVRTATTE 191
>d1jgta1 c.26.2.1 (A:210-508) beta-Lactam synthetase {Streptomyces
clavuligerus [TaxId: 1901]}
Length = 299
Score = 25.4 bits (54), Expect = 3.0
Identities = 7/42 (16%), Positives = 13/42 (30%), Gaps = 1/42 (2%)
Query: 1 MSLHYDCGLFNFWKEMNFSRHYSCGLPKEILGRTKR-FSNPT 41
+SL + + + LP E + R K +
Sbjct: 200 VSLEAGLKRRHGRDKWVLRAAMADALPAETVNRPKLGVHEGS 241
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 25.2 bits (54), Expect = 3.0
Identities = 4/21 (19%), Positives = 6/21 (28%)
Query: 70 TNVNTYAVHPGVVDTELSRHF 90
V+ + G V T
Sbjct: 176 FGVHLSLIECGPVHTAFMEKV 196
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 25.2 bits (54), Expect = 3.5
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 66 GANITNVNTYAVHPGVVDTELSRHFDSIIPGTAW 99
+ AV P +DT ++R ++W
Sbjct: 161 SGMPSGAAAIAVLPVTLDTPMNRKSMPEADFSSW 194
>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium
[TaxId: 1404]}
Length = 261
Score = 25.1 bits (54), Expect = 3.8
Identities = 3/19 (15%), Positives = 9/19 (47%)
Query: 70 TNVNTYAVHPGVVDTELSR 88
+ + PG ++T ++
Sbjct: 179 KGIRVNNIGPGAINTPINA 197
>d1hbna2 d.58.31.2 (A:2-269) Alpha chain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 268
Score = 24.9 bits (54), Expect = 3.8
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 51 TP--TNHYCKNVLFHPPGANITNVNTYAVHPGVVD 83
TP HY + V PGA + + HP +V
Sbjct: 124 TPETITHYLETVNHAMPGAAVVQEHMVETHPALVA 158
>d1e6ya2 d.58.31.2 (A:1002-1283) Alpha chain {Archaeon
Methanosarcina barkeri [TaxId: 2208]}
Length = 282
Score = 24.9 bits (54), Expect = 3.8
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 51 TP--TNHYCKNVLFHPPGANITNVNTYAVHPGVVD 83
TP NHY + + PGA + HP +VD
Sbjct: 138 TPETINHYLEVLNHAMPGAAVVQEMMVETHPALVD 172
>d1e6va2 d.58.31.2 (A:8-272) Alpha chain {Archaeon Methanopyrus
kandleri [TaxId: 2320]}
Length = 265
Score = 24.9 bits (54), Expect = 3.9
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 51 TP--TNHYCKNVLFHPPGANITNVNTYAVHPGVVD 83
TP N Y + + PG + + +HPG+
Sbjct: 121 TPETINEYMETLNHALPGGAVVQEHMVEIHPGLTW 155
>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 251
Score = 24.6 bits (53), Expect = 4.8
Identities = 5/35 (14%), Positives = 14/35 (40%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 104
+ + PG T+++ S ++ +R+
Sbjct: 177 YGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI 211
>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura
stramonium), II [TaxId: 4076]}
Length = 259
Score = 24.6 bits (53), Expect = 5.1
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 70 TNVNTYAVHPGVVDTELSRHF 90
N+ V PGV+ T L
Sbjct: 179 DNIRVNGVGPGVIATSLVEMT 199
>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase
{Escherichia coli [TaxId: 562]}
Length = 255
Score = 24.6 bits (53), Expect = 5.2
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDS 92
N+ + PG + T+ + +
Sbjct: 180 KNIRVNGIAPGAILTDALKSVIT 202
>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 244
Score = 24.2 bits (52), Expect = 5.6
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 70 TNVNTYAVHPGVVDTELSRHFDSIIPGTAWLYQRV 104
+ AV+P VV T + + S + R+
Sbjct: 170 HKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI 204
>d1fpn1_ b.121.4.1 (1:) Rhinovirus coat proteins {Human rhinovirus A
2 (HRV-2) [TaxId: 12130]}
Length = 269
Score = 24.0 bits (52), Expect = 7.3
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 18/76 (23%)
Query: 10 FNFWKEMNFSRHYSCGLPKEILGRTK-------RF-SNPTILLCDANLQTPTNHYCKNVL 61
F W +N R K RF S T++ C + L H +
Sbjct: 80 FTVWA-INLQEMAQI--------RRKFELFTYTRFDSEITLVPCISALSQDIGHITMQYM 130
Query: 62 FHPPGANI-TNVNTYA 76
+ PPGA + + + YA
Sbjct: 131 YVPPGAPVPNSRDDYA 146
>d2bjra1 b.169.1.1 (A:6-184) Sperm motility protein MFP2 {Pig
roundworm (Ascaris suum), isoform B [TaxId: 6253]}
Length = 179
Score = 23.6 bits (51), Expect = 9.7
Identities = 8/27 (29%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 99 WLYQRVGGLFIKSPLQ-GAQTTLYCAL 124
W + +G F +P++ Q +Y AL
Sbjct: 6 WAFGPIGSPFPDNPVKALGQQNMYVAL 32
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.139 0.459
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 543,453
Number of extensions: 22348
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's gapped: 86
Number of HSP's successfully gapped: 39
Length of query: 137
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 61
Effective length of database: 1,364,116
Effective search space: 83211076
Effective search space used: 83211076
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 48 (22.5 bits)