Query psy13413
Match_columns 276
No_of_seqs 57 out of 59
Neff 4.0
Searched_HMMs 29240
Date Fri Aug 16 18:50:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13413.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13413hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vp6_A Glutamate decarboxylase 98.3 2.3E-06 7.9E-11 81.9 10.1 111 71-182 389-506 (511)
2 3k40_A Aromatic-L-amino-acid d 98.2 4.6E-06 1.6E-10 78.9 9.6 97 71-182 373-472 (475)
3 2jis_A Cysteine sulfinic acid 98.1 7.4E-06 2.5E-10 77.7 9.7 109 71-180 401-514 (515)
4 2qma_A Diaminobutyrate-pyruvat 98.1 7.1E-06 2.4E-10 77.1 9.3 100 71-181 394-496 (497)
5 4e1o_A HDC, histidine decarbox 98.1 1.1E-05 3.6E-10 76.3 10.2 97 71-182 380-479 (481)
6 2okj_A Glutamate decarboxylase 98.0 1.2E-05 4E-10 75.8 9.0 110 71-181 386-502 (504)
7 1js3_A DDC;, DOPA decarboxylas 97.9 6E-05 2.1E-09 70.3 10.4 98 71-183 376-476 (486)
8 2dgk_A GAD-beta, GADB, glutama 96.9 0.0034 1.2E-07 57.9 9.0 98 71-181 327-434 (452)
9 3hbx_A GAD 1, glutamate decarb 96.5 0.015 5.2E-07 55.2 10.9 100 70-184 341-447 (502)
10 4hvk_A Probable cysteine desul 92.8 0.76 2.6E-05 39.5 10.1 99 72-186 257-378 (382)
11 2fyf_A PSAT, phosphoserine ami 92.6 0.73 2.5E-05 41.1 9.9 92 73-179 300-396 (398)
12 1vjo_A Alanine--glyoxylate ami 92.2 0.55 1.9E-05 41.3 8.6 90 72-177 296-391 (393)
13 2z9v_A Aspartate aminotransfer 92.1 0.87 3E-05 39.9 9.7 93 73-181 272-371 (392)
14 2dr1_A PH1308 protein, 386AA l 92.0 1.3 4.3E-05 38.5 10.6 94 72-181 282-379 (386)
15 3ffr_A Phosphoserine aminotran 91.7 1.2 4E-05 38.2 9.9 88 72-177 267-360 (362)
16 2dkj_A Serine hydroxymethyltra 91.5 2.3 7.8E-05 37.4 11.7 94 72-180 282-387 (407)
17 4eb5_A Probable cysteine desul 91.0 2 6.9E-05 37.2 10.7 93 74-182 259-374 (382)
18 3dzz_A Putative pyridoxal 5'-p 90.4 1.2 4E-05 38.9 8.8 90 77-181 296-389 (391)
19 3lvm_A Cysteine desulfurase; s 90.3 2.2 7.5E-05 37.8 10.6 99 72-186 285-404 (423)
20 1iug_A Putative aspartate amin 90.2 1.5 5.2E-05 37.5 9.1 93 73-181 254-348 (352)
21 3op7_A Aminotransferase class 89.4 1.7 5.7E-05 38.0 8.9 88 78-181 283-371 (375)
22 1t3i_A Probable cysteine desul 89.2 2.3 7.9E-05 37.3 9.7 93 73-181 307-413 (420)
23 3isl_A Purine catabolism prote 89.2 1.9 6.5E-05 37.9 9.2 94 72-181 291-390 (416)
24 3pj0_A LMO0305 protein; struct 88.9 3.4 0.00012 35.7 10.5 102 65-179 252-357 (359)
25 3mad_A Sphingosine-1-phosphate 88.4 3.1 0.00011 38.8 10.6 94 71-185 377-473 (514)
26 1elu_A L-cysteine/L-cystine C- 88.0 2 6.8E-05 37.3 8.4 88 72-177 298-388 (390)
27 2ch1_A 3-hydroxykynurenine tra 87.8 2.4 8.1E-05 37.1 8.9 93 72-180 283-382 (396)
28 1eg5_A Aminotransferase; PLP-d 87.8 2.9 9.9E-05 36.1 9.3 92 73-181 262-376 (384)
29 3mc6_A Sphingosine-1-phosphate 87.7 4.6 0.00016 37.3 11.1 93 70-182 344-438 (497)
30 1kmj_A Selenocysteine lyase; p 87.6 5.3 0.00018 34.7 10.9 88 76-179 306-403 (406)
31 1v72_A Aldolase; PLP-dependent 87.5 3 0.0001 35.7 9.1 86 73-181 266-353 (356)
32 2bkw_A Alanine-glyoxylate amin 87.0 3.3 0.00011 35.8 9.2 88 73-179 283-382 (385)
33 3nnk_A Ureidoglycine-glyoxylat 86.7 3.6 0.00012 36.1 9.3 95 72-182 291-391 (411)
34 2yrr_A Aminotransferase, class 86.4 5.1 0.00018 33.9 9.9 91 72-178 256-350 (353)
35 3cai_A Possible aminotransfera 86.4 4.2 0.00014 35.7 9.7 88 74-177 306-405 (406)
36 3dyd_A Tyrosine aminotransfera 86.2 4.3 0.00015 36.7 9.9 93 77-180 330-423 (427)
37 1vp4_A Aminotransferase, putat 85.9 2 6.9E-05 38.7 7.5 99 70-184 313-421 (425)
38 3zrp_A Serine-pyruvate aminotr 85.9 6.9 0.00023 33.7 10.6 92 72-181 267-363 (384)
39 3kgw_A Alanine-glyoxylate amin 84.9 2.3 7.7E-05 36.9 7.1 94 72-181 288-388 (393)
40 1j32_A Aspartate aminotransfer 84.7 3 0.0001 36.6 7.8 89 76-179 296-385 (388)
41 1xi9_A Putative transaminase; 84.0 3.6 0.00012 36.6 8.2 92 75-180 308-402 (406)
42 3f0h_A Aminotransferase; RER07 83.8 4.7 0.00016 34.9 8.6 87 75-178 282-371 (376)
43 3f9t_A TDC, L-tyrosine decarbo 83.8 5.9 0.0002 34.1 9.2 83 72-177 310-394 (397)
44 1wyu_A Glycine dehydrogenase ( 83.7 5.2 0.00018 36.4 9.3 87 72-176 345-435 (438)
45 3nra_A Aspartate aminotransfer 83.7 4.1 0.00014 35.7 8.3 89 76-180 312-404 (407)
46 1c7n_A Cystalysin; transferase 83.5 5.9 0.0002 34.8 9.2 89 77-181 300-393 (399)
47 3ffh_A Histidinol-phosphate am 83.4 6 0.0002 34.3 9.1 81 76-176 281-361 (363)
48 1bw0_A TAT, protein (tyrosine 82.9 5.6 0.00019 35.3 8.9 91 77-178 319-410 (416)
49 3ihj_A Alanine aminotransferas 82.8 5.4 0.00019 37.6 9.2 96 77-181 389-493 (498)
50 3lws_A Aromatic amino acid bet 82.5 12 0.0004 32.3 10.6 101 66-179 251-354 (357)
51 3kax_A Aminotransferase, class 82.1 9 0.00031 33.1 9.8 84 77-176 292-380 (383)
52 3aow_A Putative uncharacterize 81.7 12 0.00043 34.3 11.1 93 70-179 342-443 (448)
53 2vi8_A Serine hydroxymethyltra 80.9 8.3 0.00028 33.7 9.2 96 72-182 281-388 (405)
54 2huf_A Alanine glyoxylate amin 80.7 6.8 0.00023 34.1 8.5 92 73-180 285-382 (393)
55 2zc0_A Alanine glyoxylate tran 80.7 11 0.00038 33.1 10.0 87 78-180 310-403 (407)
56 3gbx_A Serine hydroxymethyltra 80.4 14 0.00047 32.4 10.4 94 73-182 291-397 (420)
57 2c0r_A PSAT, phosphoserine ami 80.0 9.6 0.00033 33.0 9.2 90 73-179 265-359 (362)
58 4dq6_A Putative pyridoxal phos 79.1 12 0.0004 32.5 9.5 85 77-177 300-389 (391)
59 3e9k_A Kynureninase; kynurenin 79.1 3.1 0.00011 38.0 6.0 88 73-181 358-461 (465)
60 3l8a_A METC, putative aminotra 78.7 7.5 0.00026 34.9 8.3 85 78-177 331-418 (421)
61 3tcm_A Alanine aminotransferas 78.1 18 0.00061 33.9 11.0 47 135-181 445-494 (500)
62 3ftb_A Histidinol-phosphate am 78.1 18 0.00062 31.0 10.3 84 77-179 273-359 (361)
63 3a2b_A Serine palmitoyltransfe 77.6 10 0.00034 33.4 8.7 90 73-180 297-391 (398)
64 3fkd_A L-threonine-O-3-phospha 76.9 16 0.00056 31.4 9.7 91 71-180 248-341 (350)
65 3tqx_A 2-amino-3-ketobutyrate 76.5 8.6 0.00029 33.5 7.8 89 74-180 302-395 (399)
66 1m32_A 2-aminoethylphosphonate 75.8 11 0.00039 32.0 8.3 92 73-179 268-363 (366)
67 3ly1_A Putative histidinol-pho 75.5 11 0.00037 32.4 8.1 79 77-177 270-348 (354)
68 3g0t_A Putative aminotransfera 73.8 34 0.0011 30.3 11.1 87 76-179 340-435 (437)
69 3fdb_A Beta C-S lyase, putativ 73.7 14 0.00048 31.9 8.4 86 76-178 283-373 (377)
70 1d2f_A MALY protein; aminotran 73.4 19 0.00064 31.5 9.3 85 78-178 297-386 (390)
71 3euc_A Histidinol-phosphate am 73.0 15 0.00051 31.8 8.5 82 75-177 281-364 (367)
72 2zyj_A Alpha-aminodipate amino 73.0 32 0.0011 30.2 10.8 87 78-180 299-392 (397)
73 1fc4_A 2-amino-3-ketobutyrate 72.9 25 0.00086 30.8 10.0 91 72-180 301-396 (401)
74 3m5u_A Phosphoserine aminotran 72.7 24 0.00081 32.4 10.2 89 75-179 265-358 (361)
75 3ele_A Amino transferase; RER0 71.2 5.2 0.00018 35.1 5.2 88 74-180 307-395 (398)
76 1svv_A Threonine aldolase; str 71.1 7.6 0.00026 33.1 6.0 85 72-179 269-356 (359)
77 3ecd_A Serine hydroxymethyltra 71.0 25 0.00084 30.8 9.5 95 72-181 291-397 (425)
78 1lc5_A COBD, L-threonine-O-3-p 70.5 20 0.00068 31.1 8.7 82 78-179 275-358 (364)
79 2w8t_A SPT, serine palmitoyltr 70.5 31 0.0011 31.0 10.3 92 73-180 318-414 (427)
80 3p1t_A Putative histidinol-pho 70.2 19 0.00065 30.5 8.4 84 72-177 250-333 (337)
81 3asa_A LL-diaminopimelate amin 69.9 14 0.00048 32.7 7.7 86 78-179 303-391 (400)
82 3vax_A Putative uncharacterize 69.7 7.5 0.00026 33.9 5.8 93 73-178 286-397 (400)
83 2o1b_A Aminotransferase, class 69.5 20 0.00069 31.9 8.7 86 78-181 314-403 (404)
84 3fvs_A Kynurenine--oxoglutarat 69.2 30 0.001 30.5 9.7 48 132-179 365-420 (422)
85 3n0l_A Serine hydroxymethyltra 68.6 60 0.002 28.3 11.7 94 74-182 285-390 (417)
86 3e77_A Phosphoserine aminotran 68.5 12 0.00042 34.7 7.3 92 75-179 277-373 (377)
87 1v2d_A Glutamine aminotransfer 67.7 20 0.00068 31.3 8.1 83 76-180 283-370 (381)
88 3ke3_A Putative serine-pyruvat 66.4 22 0.00076 31.4 8.3 90 75-182 279-377 (379)
89 1w23_A Phosphoserine aminotran 66.4 27 0.00094 29.8 8.6 88 73-177 264-356 (360)
90 3piu_A 1-aminocyclopropane-1-c 66.3 33 0.0011 30.7 9.5 91 79-181 337-432 (435)
91 3g7q_A Valine-pyruvate aminotr 65.7 8 0.00027 34.1 5.2 50 132-181 355-413 (417)
92 2x5f_A Aspartate_tyrosine_phen 64.9 66 0.0023 28.6 11.2 81 78-180 342-428 (430)
93 3get_A Histidinol-phosphate am 64.2 35 0.0012 29.4 8.9 79 77-176 284-362 (365)
94 3qm2_A Phosphoserine aminotran 63.8 36 0.0012 31.4 9.5 89 75-180 292-384 (386)
95 1qz9_A Kynureninase; kynurenin 63.5 28 0.00096 30.5 8.3 86 72-179 306-400 (416)
96 3hdo_A Histidinol-phosphate am 63.1 49 0.0017 28.5 9.7 81 77-177 271-351 (360)
97 2r2n_A Kynurenine/alpha-aminoa 62.7 64 0.0022 28.8 10.7 47 133-179 370-422 (425)
98 2gb3_A Aspartate aminotransfer 62.7 37 0.0013 30.1 9.0 86 77-181 304-402 (409)
99 1iay_A ACC synthase 2, 1-amino 61.6 29 0.00098 30.9 8.1 90 77-178 330-424 (428)
100 1gd9_A Aspartate aminotransfer 61.4 23 0.00079 30.9 7.3 84 78-178 296-383 (389)
101 2oqx_A Tryptophanase; lyase, p 60.7 6.5 0.00022 35.5 3.7 97 72-180 326-441 (467)
102 3h7f_A Serine hydroxymethyltra 60.6 54 0.0019 29.8 10.0 123 73-222 304-442 (447)
103 2dou_A Probable N-succinyldiam 60.4 45 0.0015 28.9 9.0 80 78-176 291-373 (376)
104 1jg8_A L-ALLO-threonine aldola 60.2 20 0.00067 30.7 6.5 96 65-179 247-344 (347)
105 2bwn_A 5-aminolevulinate synth 59.4 32 0.0011 30.2 7.9 90 73-180 304-399 (401)
106 1ax4_A Tryptophanase; tryptoph 58.8 13 0.00044 33.6 5.4 102 66-180 316-440 (467)
107 2o0r_A RV0858C (N-succinyldiam 58.3 20 0.0007 31.7 6.5 84 78-177 294-392 (411)
108 3bwn_A AT1G70560, L-tryptophan 58.0 22 0.00075 31.8 6.7 47 133-179 338-385 (391)
109 2fnu_A Aminotransferase; prote 57.7 48 0.0016 28.4 8.6 95 72-180 249-371 (375)
110 1o4s_A Aspartate aminotransfer 57.7 36 0.0012 29.9 8.0 82 76-177 302-385 (389)
111 1u08_A Hypothetical aminotrans 56.7 40 0.0014 29.3 8.0 83 78-175 297-384 (386)
112 2x5d_A Probable aminotransfera 56.2 38 0.0013 30.0 7.9 87 78-179 306-396 (412)
113 3qgu_A LL-diaminopimelate amin 55.8 31 0.0011 31.0 7.3 86 77-180 351-439 (449)
114 3brv_A Inhibitor of nuclear fa 54.9 9.8 0.00034 26.6 3.0 26 181-207 12-37 (48)
115 3ezs_A Aminotransferase ASPB; 54.7 9.4 0.00032 33.1 3.6 46 132-177 321-371 (376)
116 3h14_A Aminotransferase, class 52.8 13 0.00044 32.6 4.2 50 132-181 329-382 (391)
117 1rv3_A Serine hydroxymethyltra 52.7 86 0.003 29.1 10.1 93 73-180 327-430 (483)
118 1fg7_A Histidinol phosphate am 52.0 71 0.0024 27.8 8.9 80 76-175 272-352 (356)
119 3a9z_A Selenocysteine lyase; P 51.6 12 0.00041 33.3 3.8 93 73-179 308-426 (432)
120 3gju_A Putative aminotransfera 50.3 49 0.0017 30.2 7.8 48 131-181 407-456 (460)
121 3hmu_A Aminotransferase, class 50.3 39 0.0013 31.4 7.3 49 129-182 403-453 (472)
122 3ppl_A Aspartate aminotransfer 48.9 22 0.00076 31.7 5.2 49 132-180 364-419 (427)
123 3i5t_A Aminotransferase; pyrid 48.4 73 0.0025 29.6 8.8 51 129-184 405-457 (476)
124 1bs0_A Protein (8-amino-7-oxon 48.3 50 0.0017 28.6 7.3 87 74-178 293-384 (384)
125 4a6r_A Omega transaminase; tra 46.3 36 0.0012 31.1 6.3 48 130-182 401-450 (459)
126 3obf_A Putative transcriptiona 46.2 48 0.0016 26.5 6.4 58 125-184 95-170 (176)
127 3cq5_A Histidinol-phosphate am 46.0 74 0.0025 27.6 8.0 76 78-177 289-364 (369)
128 1sff_A 4-aminobutyrate aminotr 45.6 1.1E+02 0.0037 26.9 9.1 47 131-179 374-422 (426)
129 1fxk_C Protein (prefoldin); ar 45.2 64 0.0022 25.3 6.8 64 141-204 58-123 (133)
130 1zod_A DGD, 2,2-dialkylglycine 44.9 21 0.00073 31.8 4.4 49 131-179 380-430 (433)
131 2oga_A Transaminase; PLP-depen 44.7 66 0.0023 28.4 7.6 28 154-181 367-396 (399)
132 3ez1_A Aminotransferase MOCR f 43.8 32 0.0011 30.5 5.4 50 132-181 359-415 (423)
133 3ei9_A LL-diaminopimelate amin 43.8 1.2E+02 0.0039 27.0 9.1 48 132-179 376-426 (432)
134 3if2_A Aminotransferase; YP_26 43.5 26 0.0009 31.3 4.8 50 132-181 381-440 (444)
135 3e2y_A Kynurenine-oxoglutarate 43.4 77 0.0026 27.6 7.7 25 152-176 384-408 (410)
136 3nx3_A Acoat, acetylornithine 42.3 70 0.0024 27.9 7.3 44 132-179 348-393 (395)
137 3n5m_A Adenosylmethionine-8-am 41.3 29 0.001 31.4 4.8 47 132-178 399-449 (452)
138 1mdo_A ARNB aminotransferase; 41.1 1.6E+02 0.0056 25.3 9.4 95 71-178 261-383 (393)
139 1b5p_A Protein (aspartate amin 40.4 17 0.00058 32.0 3.0 45 132-176 336-380 (385)
140 4b6x_A AVRRPS4, avirulence pro 40.0 23 0.00077 27.6 3.2 30 176-205 26-55 (90)
141 2e7j_A SEP-tRNA:Cys-tRNA synth 39.4 48 0.0016 28.4 5.6 85 77-180 275-369 (371)
142 3d6k_A Putative aminotransfera 38.9 35 0.0012 30.5 4.9 49 132-180 362-417 (422)
143 2ord_A Acoat, acetylornithine 38.7 21 0.00073 31.3 3.4 44 132-179 350-395 (397)
144 3dod_A Adenosylmethionine-8-am 37.7 24 0.00083 32.0 3.7 46 131-181 396-443 (448)
145 2z67_A O-phosphoseryl-tRNA(SEC 35.0 63 0.0021 29.6 6.0 87 71-176 350-453 (456)
146 3jtx_A Aminotransferase; NP_28 35.0 33 0.0011 29.8 3.9 45 132-176 340-393 (396)
147 4adb_A Succinylornithine trans 34.2 35 0.0012 29.8 4.0 47 131-181 352-400 (406)
148 2eh6_A Acoat, acetylornithine 34.1 1.1E+02 0.0039 26.2 7.2 81 72-176 291-373 (375)
149 2m1l_A Cyclin-dependent kinase 33.9 37 0.0013 25.5 3.4 40 165-204 15-54 (69)
150 2zdi_C Prefoldin subunit alpha 32.3 1.3E+02 0.0043 24.2 6.8 64 141-204 68-133 (151)
151 3dxv_A Alpha-amino-epsilon-cap 32.0 38 0.0013 30.3 3.9 49 132-182 376-426 (439)
152 3ruy_A Ornithine aminotransfer 31.5 1.3E+02 0.0045 26.1 7.3 81 74-177 306-390 (392)
153 2zy4_A L-aspartate beta-decarb 31.4 57 0.0019 31.3 5.3 47 133-179 472-520 (546)
154 2eo5_A 419AA long hypothetical 31.3 90 0.0031 27.9 6.3 43 133-179 372-416 (419)
155 3i4j_A Aminotransferase, class 31.0 1.6E+02 0.0055 26.1 7.9 49 131-179 373-426 (430)
156 2z61_A Probable aspartate amin 30.6 38 0.0013 29.3 3.6 46 132-177 319-367 (370)
157 2o99_A Acetate operon represso 30.3 1.6E+02 0.0054 23.6 7.1 52 134-185 107-176 (182)
158 1tf1_A Negative regulator of a 30.1 1.3E+02 0.0044 24.7 6.7 52 134-185 123-192 (198)
159 1yiz_A Kynurenine aminotransfe 29.8 51 0.0017 29.2 4.3 92 78-177 323-425 (429)
160 3ka1_A RBCX protein; chaperone 29.6 77 0.0026 26.1 5.0 55 144-205 44-100 (126)
161 4ffc_A 4-aminobutyrate aminotr 29.5 61 0.0021 29.7 4.9 49 131-181 399-449 (453)
162 2w6b_A RHO guanine nucleotide 28.9 1.1E+02 0.0036 22.1 5.0 34 167-200 19-52 (56)
163 2a7v_A Serine hydroxymethyltra 28.8 3.8E+02 0.013 25.5 11.6 89 77-180 341-440 (490)
164 1gc0_A Methionine gamma-lyase; 28.2 2.5E+02 0.0086 24.8 8.7 23 73-95 266-288 (398)
165 3rq1_A Aminotransferase class 27.7 39 0.0013 29.8 3.2 45 132-181 370-415 (418)
166 2rfv_A Methionine gamma-lyase; 26.6 2.1E+02 0.0071 25.2 7.8 23 153-175 370-394 (398)
167 2c81_A Glutamine-2-deoxy-scyll 26.2 3.3E+02 0.011 23.9 9.4 27 154-180 384-413 (418)
168 2pb2_A Acetylornithine/succiny 26.0 61 0.0021 29.2 4.2 44 132-179 371-416 (420)
169 3hyb_A RBCX protein; rubisco, 26.0 93 0.0032 26.5 5.0 55 144-205 64-119 (155)
170 3l44_A Glutamate-1-semialdehyd 25.9 61 0.0021 28.9 4.2 48 131-182 384-431 (434)
171 1z7d_A Ornithine aminotransfer 25.7 49 0.0017 30.1 3.5 45 132-180 382-428 (433)
172 2k9i_A Plasmid PRN1, complete 25.4 59 0.002 21.2 3.1 14 190-203 34-47 (55)
173 2o0y_A Transcriptional regulat 25.4 1.6E+02 0.0054 25.3 6.6 51 134-184 186-254 (260)
174 3a8u_X Omega-amino acid--pyruv 24.9 36 0.0012 30.7 2.5 43 132-179 401-445 (449)
175 3mq0_A Transcriptional repress 24.6 1.2E+02 0.0041 26.5 5.8 54 134-187 199-270 (275)
176 3ghf_A Septum site-determining 24.6 61 0.0021 25.6 3.5 52 124-180 25-76 (120)
177 2cjg_A L-lysine-epsilon aminot 24.5 62 0.0021 29.5 4.0 45 131-179 400-446 (449)
178 3ih6_A Putative zinc protease; 24.4 1.7E+02 0.0059 22.9 6.2 49 132-181 58-111 (197)
179 1ysq_A HTH-type transcriptiona 24.3 1.2E+02 0.0043 24.5 5.5 54 133-186 110-181 (193)
180 2kw6_A Cyclin-dependent kinase 24.0 76 0.0026 23.5 3.6 39 166-204 12-50 (65)
181 2x7r_B Transmembrane protein G 23.9 46 0.0016 24.1 2.4 39 184-225 11-55 (63)
182 3b1d_A Betac-S lyase; HET: PLP 29.6 17 0.00057 32.1 0.0 46 132-177 341-389 (392)
183 3uwc_A Nucleotide-sugar aminot 23.5 86 0.003 26.9 4.5 27 154-180 342-370 (374)
184 1ysp_A Transcriptional regulat 23.1 1.6E+02 0.0055 23.5 5.9 53 133-185 102-172 (181)
185 3oks_A 4-aminobutyrate transam 22.8 98 0.0033 28.2 5.0 46 131-178 401-448 (451)
186 2ez2_A Beta-tyrosinase, tyrosi 22.8 1.2E+02 0.0043 27.0 5.6 27 153-179 400-429 (456)
187 1wyu_B Glycine dehydrogenase s 22.8 2.3E+02 0.0077 26.0 7.5 90 73-180 346-440 (474)
188 1ohv_A 4-aminobutyrate aminotr 22.6 57 0.0019 30.3 3.4 46 131-180 423-470 (472)
189 3a69_A Flagellar HOOK protein 22.1 1.2E+02 0.004 28.9 5.5 47 153-200 352-400 (402)
190 1gl2_D Syntaxin 8, vesicle tra 22.0 1.3E+02 0.0046 20.9 4.5 26 170-195 21-46 (65)
191 3r4k_A Transcriptional regulat 21.6 1.5E+02 0.0052 25.5 5.8 51 134-184 177-245 (260)
192 1mkm_A ICLR transcriptional re 20.9 1.6E+02 0.0056 25.0 5.8 51 134-184 178-246 (249)
193 3f6t_A Aspartate aminotransfer 20.7 1E+02 0.0035 29.1 4.8 51 132-182 473-526 (533)
194 2ctz_A O-acetyl-L-homoserine s 20.7 3.9E+02 0.013 24.0 8.5 25 73-97 291-315 (421)
195 2hox_A ALLIIN lyase 1; cystein 20.5 53 0.0018 30.0 2.7 45 133-177 375-421 (427)
196 3kki_A CAI-1 autoinducer synth 20.4 4.3E+02 0.015 23.0 10.0 47 132-178 350-401 (409)
197 1c4k_A Protein (ornithine deca 20.1 2.5E+02 0.0086 28.4 7.7 49 132-184 519-569 (730)
No 1
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=98.30 E-value=2.3e-06 Score=81.85 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=87.5
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeec--CCCCceEEEEeecCCCCCCC-CchHHHHHHHHHHHHHHHHHhcCCcceecc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVD--MPGWAGLGGVRYVPPAWGAT-DTDQAKAELNRLNIQVVRTLRTSDAAFSLG 147 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe--~~~waGLG~VRYvP~~w~~~-~~d~~k~ELnKLN~eLl~kLqesd~aFssG 147 (276)
.++....+++++|.+.+++.|+|+++. .+.. ++.+|||.|....+. +.......+++.|.+|.++|.+.+.++...
T Consensus 389 ~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~ 467 (511)
T 3vp6_A 389 NQINKCLELAEYLYAKIKNREEFEMVFNGEPEH-TNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGY 467 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSS-SCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCe-EEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 456778889999999999999999997 4555 889999999876543 334455679999999999999988776654
Q ss_pred cccC-CceeEEEEec---CCcccHHHHHHHHHHHhHhHH
Q psy13413 148 EGTD-GLACVRFGMV---TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 148 ~~~~-G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEIE 182 (276)
+... +..++|+++. +++.||+.+++.|.+.|+++.
T Consensus 468 ~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~~ 506 (511)
T 3vp6_A 468 QPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDLH 506 (511)
T ss_dssp EEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred EEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhhh
Confidence 3334 4579999985 788899999999999998875
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=98.20 E-value=4.6e-06 Score=78.90 Aligned_cols=97 Identities=14% Similarity=0.157 Sum_probs=83.3
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.++....++++.|.+.+++.|+++++.++.+ ++.+|||.+. +..|.+|.++|++.+.+|..++..
T Consensus 373 ~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~-~iv~f~~~~~--------------~~~~~~l~~~L~~~g~~~~~~~~~ 437 (475)
T 3k40_A 373 AHIRRHCNFAKQFGDLCVADSRFELAAEINM-GLVCFRLKGS--------------NERNEALLKRINGRGHIHLVPAKI 437 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTEEESSCCBT-TEEEEEESSC--------------HHHHHHHHHHHHHHTSCBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEecCCce-EEEEEEeCCc--------------hHHHHHHHHHHHhCCcEEEEeeEE
Confidence 5667788899999999999999999988777 9999998642 236789999999999888877777
Q ss_pred CCceeEEEEec---CCcccHHHHHHHHHHHhHhHH
Q psy13413 151 DGLACVRFGMV---TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 151 ~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEIE 182 (276)
.|..++||++. +++.||+++++.|.+.++++.
T Consensus 438 ~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~ 472 (475)
T 3k40_A 438 KDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEME 472 (475)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999976 678899999999999988764
No 3
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=98.14 E-value=7.4e-06 Score=77.65 Aligned_cols=109 Identities=13% Similarity=0.138 Sum_probs=85.0
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCC-CchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGAT-DTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~-~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
.++....+++++|.+.+++.|+++++.++.. +..+|||.|...... ..+.-.+.++++|..+.++|.+.+.+|...+.
T Consensus 401 ~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~-~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~ 479 (515)
T 2jis_A 401 RRIDQAFVLARYLVEEMKKREGFELVMEPEF-VNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQP 479 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTEEESSCCSS-SEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCe-eEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 4567788999999999999999999987766 779999998743221 11223456888899999999998988864444
Q ss_pred cCC-ceeEEEEec---CCcccHHHHHHHHHHHhHh
Q psy13413 150 TDG-LACVRFGMV---TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 150 ~~G-~~CVRfGMv---T~d~DV~ELVd~I~~~GrE 180 (276)
..| ..+|||+.. +++.||+.+++.|.+.+++
T Consensus 480 ~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~~ 514 (515)
T 2jis_A 480 HGTRGNFFRVVVANSALTCADMDFLLNELERLGQD 514 (515)
T ss_dssp ETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 445 589999996 8888999999999887765
No 4
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=98.13 E-value=7.1e-06 Score=77.11 Aligned_cols=100 Identities=18% Similarity=0.217 Sum_probs=83.3
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.++....++++.|.+.+++.|+++++.++.. ++.+|||.|.. .+.+++|.+|.++|++.+.+|..++..
T Consensus 394 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-~~v~f~~~~~~----------~~~~~l~~~l~~~l~~~G~~~~~~~~~ 462 (497)
T 2qma_A 394 DMYDHLLAQTLEVADMIRTNDQFELLAEPSL-STVLFRATHET----------ADLDELNKALRLEALTRGIAVLGETIV 462 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEECSCCSS-SEEEEEECCSS----------SCHHHHHHHHHHHHHHHTSCBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEcCCCc-eEEEEEEcCCc----------cCHHHHHHHHHHHHHhCCCEEEEeeEE
Confidence 4567778899999999999999999866665 79999998754 134578899999999999999877777
Q ss_pred CCceeEEEEe---cCCcccHHHHHHHHHHHhHhH
Q psy13413 151 DGLACVRFGM---VTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 151 ~G~~CVRfGM---vT~d~DV~ELVd~I~~~GrEI 181 (276)
.|..+|||++ .+++.||+++++.|.+.++++
T Consensus 463 ~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 496 (497)
T 2qma_A 463 DGKTALKFTILNPCLTTSDFESLLSKINMLAVEL 496 (497)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 8889999987 488889999999998887653
No 5
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=98.12 E-value=1.1e-05 Score=76.26 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=82.0
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.++....++++.|.+.+++.|+|+++.++.. ++.+|||.+. +..|.+|.++|++.+.+|..++..
T Consensus 380 ~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~-~~v~f~~~~~--------------~~~~~~l~~~L~~~g~~~~~~~~~ 444 (481)
T 4e1o_A 380 AHVRHGTEMAKYFESLVRNDPSFEIPAKRHL-GLVVFRLKGP--------------NSLTENVLKEIAKAGRLFLIPATI 444 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEECCSCCCS-SEEEEEESSC--------------HHHHHHHHHHHHHHCSSBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCce-eEEEEEeCCc--------------hHHHHHHHHHHHhCCeEEEEeeEE
Confidence 4567788999999999999999999887777 8999998542 246789999999988888877777
Q ss_pred CCceeEEEEec---CCcccHHHHHHHHHHHhHhHH
Q psy13413 151 DGLACVRFGMV---TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 151 ~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEIE 182 (276)
.|..++||++. +++.||+++++.|.+.++++.
T Consensus 445 ~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~ 479 (481)
T 4e1o_A 445 QDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLIL 479 (481)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 89999999976 577899999999999888754
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=98.05 E-value=1.2e-05 Score=75.75 Aligned_cols=110 Identities=14% Similarity=0.197 Sum_probs=84.7
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeec--CCCCceEEEEeecCCCCCCC-CchHHHHHHHHHHHHHHHHHhcCCcceecc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVD--MPGWAGLGGVRYVPPAWGAT-DTDQAKAELNRLNIQVVRTLRTSDAAFSLG 147 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe--~~~waGLG~VRYvP~~w~~~-~~d~~k~ELnKLN~eLl~kLqesd~aFssG 147 (276)
.++....++++.|.+.+++.|+++++. .+.. ++.+|||.|...... ....-...++++|.+|.++|++.+.+|..+
T Consensus 386 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~ 464 (504)
T 2okj_A 386 NQINKCLELAEYLYAKIKNREEFEMVFNGEPEH-TNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGY 464 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSS-SCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCe-EEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEe
Confidence 356778899999999999999999986 3555 889999998642111 112223557788999999999988877765
Q ss_pred cccCCc-eeEEEEec---CCcccHHHHHHHHHHHhHhH
Q psy13413 148 EGTDGL-ACVRFGMV---TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 148 ~~~~G~-~CVRfGMv---T~d~DV~ELVd~I~~~GrEI 181 (276)
....|. .||||++. +++.||+++++.|.+.++++
T Consensus 465 ~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 465 QPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp EEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred eEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 556665 79999997 88899999999998887764
No 7
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=97.88 E-value=6e-05 Score=70.29 Aligned_cols=98 Identities=12% Similarity=0.160 Sum_probs=79.0
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.++....++++.|.+.+++.|+++++.++.. ++.+||+.+. +++|.+|.++|++.+.+|..+..+
T Consensus 376 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-~~v~f~~~~~--------------~~~~~~l~~~L~~~g~~~~~~~~~ 440 (486)
T 1js3_A 376 AYIRKHVQLSHEFEAFVLQDPRFEVCAEVTL-GLVCFRLKGS--------------DGLNEALLERINSARKIHLVPCRL 440 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEECSCCCS-SEEEEEESSC--------------HHHHHHHHHHHHHHTSCBCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCCCce-eEEEEEecCh--------------HHHHHHHHHHHHhcCCEEEEEEEE
Confidence 3466778889999999999999999876665 8999998642 256788999998888777777667
Q ss_pred CCceeEEEEec---CCcccHHHHHHHHHHHhHhHHH
Q psy13413 151 DGLACVRFGMV---TAETDITELLSLVEETGQQEEE 183 (276)
Q Consensus 151 ~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEIEe 183 (276)
+|..++||++. +++.||+++++.|.+.++++.+
T Consensus 441 ~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 441 RGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLA 476 (486)
T ss_dssp TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 88999999976 5667999999999988876543
No 8
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=96.89 E-value=0.0034 Score=57.92 Aligned_cols=98 Identities=12% Similarity=0.046 Sum_probs=69.8
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecC----CCCceEEEEeecCCCCCCCCchHHHHHHHHHH-HHHHHHHhcCCc---
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDM----PGWAGLGGVRYVPPAWGATDTDQAKAELNRLN-IQVVRTLRTSDA--- 142 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~----~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN-~eLl~kLqesd~--- 142 (276)
.++....+.++.|.+.+++.++++++.+ +.. ++.+||+.+.. . +.+| .+|.++|++.+.
T Consensus 327 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~-~~v~f~~~~~~-~-----------~~~~~~~l~~~L~~~Gi~v~ 393 (452)
T 2dgk_A 327 KVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGI-PAVCFKLKDGE-D-----------PGYTLYDLSERLRLRGWQVP 393 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBS-SEEEEEECTTC-C-----------CSCCHHHHHHHHHHTTCBCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCe-EEEEEEecCcc-c-----------ccCCHHHHHHHHHhcCCeee
Confidence 4566778899999999999999999865 344 89999986532 0 0233 568888877665
Q ss_pred ceecccccCCceeEEEEecC--CcccHHHHHHHHHHHhHhH
Q psy13413 143 AFSLGEGTDGLACVRFGMVT--AETDITELLSLVEETGQQE 181 (276)
Q Consensus 143 aFssG~~~~G~~CVRfGMvT--~d~DV~ELVd~I~~~GrEI 181 (276)
.|.......|..|+||++.. ++.|++.+++.+.+..+++
T Consensus 394 ~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~ 434 (452)
T 2dgk_A 394 AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYL 434 (452)
T ss_dssp EEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred eeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 34443444578899999983 4678888888887665543
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=96.52 E-value=0.015 Score=55.22 Aligned_cols=100 Identities=11% Similarity=0.085 Sum_probs=75.4
Q ss_pred hHHHHHhHHHHHHHHHHHhcCCCeeeecC-CCCceEEEEeecCCCCCCCCchHHHHHHHHHHH-HHHHHHhcCCcceecc
Q psy13413 70 VDILQATVAHKASFISLVEASPKLTLVDM-PGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI-QVVRTLRTSDAAFSLG 147 (276)
Q Consensus 70 i~iL~~TI~lr~~F~elVe~~psLelVe~-~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~-eLl~kLqesd~aFssG 147 (276)
-.++...+++++.|.+.+++.++++++.+ +.. ++.+||+.+.. .+|. +|.++|++.+..+...
T Consensus 341 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~~v~f~~~~~~--------------~~~~~~l~~~L~~~Gi~v~~~ 405 (502)
T 3hbx_A 341 RNVMENCRENMIVLREGLEKTERFNIVSKDEGV-PLVAFSLKDSS--------------CHTEFEISDMLRRYGWIVPAY 405 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSS-SEEEEEESSCS--------------SCCHHHHHHHHHTTTCBCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCc-eEEEEEecCCC--------------cCCHHHHHHHHHhCCcEEeec
Confidence 46677888999999999999999999977 555 89999985432 1233 7888898877775432
Q ss_pred ---cccCCceeEEEEec--CCcccHHHHHHHHHHHhHhHHHh
Q psy13413 148 ---EGTDGLACVRFGMV--TAETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 148 ---~~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIEes 184 (276)
+...|..++||++- .+..|++.|++.+.+..+++.+.
T Consensus 406 ~~p~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~~ 447 (502)
T 3hbx_A 406 TMPPNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDEL 447 (502)
T ss_dssp ECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCcccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 23456799999987 56778999998888777666543
No 10
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=92.84 E-value=0.76 Score=39.52 Aligned_cols=99 Identities=14% Similarity=0.119 Sum_probs=62.3
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
+.....+.++.|.+.+++.|++++..+.. .+++..|++ | ++ + . .++.+.|.+.+.....|..
T Consensus 257 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~----~-------~~~~~~l~~~gi~v~~g~~ 320 (382)
T 4hvk_A 257 EAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRF-S-YI---E----G-------ESIVLSLDMAGIQASTGSA 320 (382)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEE-T-TC---C----H-------HHHHHHHHHTTCBCBCC--
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEE-C-CC---C----H-------HHHHHHHHHCCEEEeeCCc
Confidence 34455667888888899888998876542 235666665 2 21 0 1 1356666665555554432
Q ss_pred cC-------------C------ceeEEEEec--CCcccHHHHHHHHHHHhHhHHHhHH
Q psy13413 150 TD-------------G------LACVRFGMV--TAETDITELLSLVEETGQQEEESWK 186 (276)
Q Consensus 150 ~~-------------G------~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIEessk 186 (276)
+. | ..+||+++- .++.|++++++.+.+..+++.+.+.
T Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~ 378 (382)
T 4hvk_A 321 CSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSMSP 378 (382)
T ss_dssp ------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 21 1 578999987 5677899999999888776655433
No 11
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=92.56 E-value=0.73 Score=41.11 Aligned_cols=92 Identities=15% Similarity=0.109 Sum_probs=60.4
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeec--CCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVD--MPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe--~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
.....+.++.|.+.+++.|+++++. +..-.+ +..|++ |.++. ..++.++|.+.+..+..|-.
T Consensus 300 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~l~~~L~~~gI~v~~g~~ 364 (398)
T 2fyf_A 300 VKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDF-VDDVD--------------AGTVAKILRANGIVDTEPYR 364 (398)
T ss_dssp HHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEE-CTTSC--------------HHHHHHHHHHTTCBCCSCCT
T ss_pred HHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEEC-CCCCC--------------HHHHHHHHHHCCcEEecCcc
Confidence 3344567788888898888998873 212234 777776 43310 13567777766666654432
Q ss_pred cCCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 150 TDGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 150 ~~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
..|..+||+++- +++.|++.+++.+.+..+
T Consensus 365 ~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 365 KLGRNQLRVAMFPAVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 234579999998 578889988888876543
No 12
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=92.23 E-value=0.55 Score=41.28 Aligned_cols=90 Identities=18% Similarity=0.154 Sum_probs=60.3
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGE 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~ 148 (276)
+.....+.++.|.+.+++. +++++.+.. |+++..|++ |.++. ..++.++|.+. +.....|.
T Consensus 296 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~--------------~~~~~~~l~~~~gi~v~~g~ 359 (393)
T 1vjo_A 296 CWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCI-PDGVD--------------GKAVARRLLNEHNIEVGGGL 359 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEEC-CTTCC--------------HHHHHHHHHHHHCEECEECC
T ss_pred HHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEc-CCCCC--------------HHHHHHHHHhhCCEEEecCc
Confidence 3444556677888888876 788776554 667778876 43310 12466677665 77777666
Q ss_pred ccCCceeEEEEe---cCCcccHHHHHHHHHHH
Q psy13413 149 GTDGLACVRFGM---VTAETDITELLSLVEET 177 (276)
Q Consensus 149 ~~~G~~CVRfGM---vT~d~DV~ELVd~I~~~ 177 (276)
...+..++||++ .+++.+++++++.+.+.
T Consensus 360 ~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 360 GELAGKVWRVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCccCChHHHHHHHHHHHHHH
Confidence 555678999994 25666799999887653
No 13
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=92.08 E-value=0.87 Score=39.88 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=60.3
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCC---CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPG---WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGE 148 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~---waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~ 148 (276)
.....+.++.|.+.+++. ++++..+.. -.++..|++ |.++. . .++.++|.+. +.....|.
T Consensus 272 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~~-------~-------~~l~~~L~~~~gi~v~~g~ 335 (392)
T 2z9v_A 272 WARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRT-PDGVD-------E-------KALRQAARARYGVVFSSGR 335 (392)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEEC-CTTCC-------H-------HHHHHHHHHHHCEECEECC
T ss_pred HHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEEC-CCCCC-------H-------HHHHHHHHhcCCEEEecCC
Confidence 444556677788888776 777765221 235666765 33210 1 2466677664 77666665
Q ss_pred ccCCceeEEEEe---cCCcccHHHHHHHHHHHhHhH
Q psy13413 149 GTDGLACVRFGM---VTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ~~~G~~CVRfGM---vT~d~DV~ELVd~I~~~GrEI 181 (276)
...+..+||++. ..++.|++++++.+.+.-+++
T Consensus 336 ~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 336 GETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 445568999995 368889999999998776544
No 14
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=92.04 E-value=1.3 Score=38.52 Aligned_cols=94 Identities=20% Similarity=0.216 Sum_probs=62.9
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
+.....+.++.|.+.+++. +++++.+.. +..+..|++ |.+. . ..++.++|.+.+.....|..
T Consensus 282 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~-------~-------~~~~~~~l~~~gi~v~~~~~ 345 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLT-PPGI-------K-------GDEVYEAMRKRGFELAKGYG 345 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEEC-CTTC-------C-------HHHHHHHHHHTTEECEECCG
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEc-CCCC-------C-------HHHHHHHHHHCCeEEecCcc
Confidence 3444556677888888877 787766533 446666765 3220 0 23566777666666665554
Q ss_pred cCCceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 150 TDGLACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 150 ~~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
..+..+||+++. .++.|++++++.+.+.-+++
T Consensus 346 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 379 (386)
T 2dr1_A 346 SVKEKTFRIGHMGYMKFEDIQEMLDNLREVINEL 379 (386)
T ss_dssp GGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 445679999998 68889999999988775543
No 15
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=91.71 E-value=1.2 Score=38.24 Aligned_cols=88 Identities=15% Similarity=0.106 Sum_probs=61.0
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCC----CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMP----GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLG 147 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~----~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG 147 (276)
++....+.++.+.+.+++.|++++..+. .+ ++..|+. |.. ..++.++|.+.+..+..|
T Consensus 267 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~----------------~~~~~~~l~~~gi~~~~g 328 (362)
T 3ffr_A 267 IRKQTEEKAALINTYIESSKVFSFGVEDAKLRSM-TTIVANT-TML----------------PGEINKILEPFDMAVGAG 328 (362)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCS-SEEEEEE-SSC----------------HHHHHHHHGGGTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHccCceeccCChhhcCC-ceEEEec-CCC----------------HHHHHHHHHHCCeEEecC
Confidence 4445556778888899999999987622 23 5555554 211 235788888778887776
Q ss_pred cccCCceeEEEEec--CCcccHHHHHHHHHHH
Q psy13413 148 EGTDGLACVRFGMV--TAETDITELLSLVEET 177 (276)
Q Consensus 148 ~~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~ 177 (276)
....+..+||+++- .++.||+.+++.+.+.
T Consensus 329 ~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 329 YGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp SGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 55556789999976 5677888888877653
No 16
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=91.45 E-value=2.3 Score=37.38 Aligned_cols=94 Identities=10% Similarity=0.023 Sum_probs=59.2
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc--
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG-- 149 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~-- 149 (276)
+.....+.++.|.+.+++. ++.++.++.-..+..|++.+.+ .. -.++.+.|.+.+.....|..
T Consensus 282 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-------~~-------~~~~~~~l~~~gi~v~~~~~~~ 346 (407)
T 2dkj_A 282 YSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG-------LT-------GKEAEERLDAVGITVNKNAIPF 346 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-------CC-------HHHHHHHHHHTTEECEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccC-------CC-------HHHHHHHHHHcCceecCCcCcc
Confidence 3444556677888888877 7887754333456667663211 00 12456666665555544432
Q ss_pred ----cCCceeEEEEec------CCcccHHHHHHHHHHHhHh
Q psy13413 150 ----TDGLACVRFGMV------TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 150 ----~~G~~CVRfGMv------T~d~DV~ELVd~I~~~GrE 180 (276)
..+..++|++.- .++.|++++++.+.+.-++
T Consensus 347 ~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 347 DPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp CSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 123468999984 6889999999999887665
No 17
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=90.99 E-value=2 Score=37.17 Aligned_cols=93 Identities=14% Similarity=0.145 Sum_probs=58.3
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc-
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT- 150 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~- 150 (276)
....+.++.|.+.+++.|++++..+.. .+++..|++ | ++ + . .++.++|.+.+.....|..+
T Consensus 259 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~----~-------~~~~~~l~~~gi~v~~g~~~~ 322 (382)
T 4eb5_A 259 ERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRF-S-YI---E----G-------ESIVLSLDMAGIQASTGSACS 322 (382)
T ss_dssp HHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEE-T-TS---C----H-------HHHHHHHHHHTCBCBCCCGGG
T ss_pred HHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEe-C-Cc---C----H-------HHHHHHHHHCCEEEecccccc
Confidence 344556778888888888898776542 235777765 3 21 0 1 13555555544444433211
Q ss_pred ------------------CCceeEEEEec--CCcccHHHHHHHHHHHhHhHH
Q psy13413 151 ------------------DGLACVRFGMV--TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 151 ------------------~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIE 182 (276)
.+..+||+++- +++.|++++++.+.+..+++.
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 374 (382)
T 4eb5_A 323 SKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLR 374 (382)
T ss_dssp TSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 13579999987 578899999999987765443
No 18
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=90.45 E-value=1.2 Score=38.89 Aligned_cols=90 Identities=13% Similarity=0.118 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhc-CCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHH-hcCCcceecccccC--C
Q psy13413 77 VAHKASFISLVEA-SPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTL-RTSDAAFSLGEGTD--G 152 (276)
Q Consensus 77 I~lr~~F~elVe~-~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kL-qesd~aFssG~~~~--G 152 (276)
-+.++.|.+.+++ .|+++++.+..- -+..+++...++ . ..++.++| ++.+..+..|..+. +
T Consensus 296 ~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~-------~~~~~~~l~~~~gi~v~~g~~~~~~~ 360 (391)
T 3dzz_A 296 RDNFAYAREFLAKEVPEVKVLDSNAS-YLAWVDISALGM-------N-------AEDFCKYLREKTGLIISAGNGYRGNG 360 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCCBS-SEEEEECGGGCS-------C-------HHHHHHHHHHHHCEECEESGGGCTTG
T ss_pred HHHHHHHHHHHHhhCCCcEEeccCce-EEEEEehhhcCC-------C-------HHHHHHHHHHhCCEEEeCchhhCCCC
Confidence 3457778888888 789987754432 223344422221 1 13466777 36677766665443 3
Q ss_pred ceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 153 LACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 153 ~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
..+||+++.+++.|++++++.+.+.-+++
T Consensus 361 ~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 361 HEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp GGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 68999999988889999998888765543
No 19
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=90.30 E-value=2.2 Score=37.80 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=60.0
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc----CCccee
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT----SDAAFS 145 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe----sd~aFs 145 (276)
+.....+.++.|.+.+++.|++++..+.. .+++..|++ +.. + . .++.+.|.+ .+..|.
T Consensus 285 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~----~-------~~l~~~l~~i~v~~g~~~~ 348 (423)
T 3lvm_A 285 EMERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSF-NYV----E----G-------ESLIMALKDLAVSSGSACT 348 (423)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEE-TTS----C----H-------HHHHHHTTTEECBCCCC--
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEe-CCC----C----H-------HHHHHHHhhheeccCcccc
Confidence 33445567788888898889999887654 235677776 211 0 1 134444544 222232
Q ss_pred cccc----------cC---CceeEEEEec--CCcccHHHHHHHHHHHhHhHHHhHH
Q psy13413 146 LGEG----------TD---GLACVRFGMV--TAETDITELLSLVEETGQQEEESWK 186 (276)
Q Consensus 146 sG~~----------~~---G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIEessk 186 (276)
.+.. .. +..+||+++- .++.||+++++.+.+..+++.+.+.
T Consensus 349 ~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~ 404 (423)
T 3lvm_A 349 SASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSP 404 (423)
T ss_dssp ---CCCCHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTSSH
T ss_pred CCCccccHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhccCc
Confidence 2110 01 1478999887 5678999999999988777665444
No 20
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=90.19 E-value=1.5 Score=37.47 Aligned_cols=93 Identities=13% Similarity=0.094 Sum_probs=61.9
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCC
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDG 152 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G 152 (276)
.....+.++.|.+.+++. +++++.+....++..|++ |.+. . ..++.++|.+.+.....|....+
T Consensus 254 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~~-------~-------~~~~~~~l~~~gi~v~~~~~~~~ 317 (352)
T 1iug_A 254 LALKAWQNALLYGVGEEG-GLRPVPKRFSPAVAAFYL-PEGV-------P-------YARVKEAFAQRGAVIAGGQGPLK 317 (352)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEESCSSBCTTCEEEEC-CTTC-------C-------HHHHHHHHHTTTEECEECCGGGT
T ss_pred HHHHHHHHHHHHHHHHHC-CCcccccccCCeEEEEEc-CCCC-------C-------HHHHHHHHHHCCEEEEeCCCccC
Confidence 344456778888888876 888775432445777765 3220 0 12567778776766665654445
Q ss_pred ceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 153 LACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 153 ~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
..+||+++. +++.|++++++.+.+..+++
T Consensus 318 ~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 318 GKVFRLSLMGAYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp TTEEEECCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccCCHHHHHHHHHHHHHHHHHh
Confidence 679999998 56789999999888775544
No 21
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=89.38 E-value=1.7 Score=38.01 Aligned_cols=88 Identities=10% Similarity=0.058 Sum_probs=57.8
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHH-hcCCcceecccccCCceeE
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTL-RTSDAAFSLGEGTDGLACV 156 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kL-qesd~aFssG~~~~G~~CV 156 (276)
+.++.|.+.+++.|.+.++.+.. |...+-.+|..+. ..+++++| ++.+..+..|..+....++
T Consensus 283 ~~~~~l~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~--------------~~~~~~~ll~~~gi~v~~g~~~~~~~~i 346 (375)
T 3op7_A 283 ENLAILDQWIEEEPLVSYIRPAV--VSTSFVKIAVDMP--------------MEDFCLQLLQEHGVLLVPGNRFERDGYV 346 (375)
T ss_dssp HHHHHHHHHHHHCTTEEECCCSS--SSCEEEEECCSSC--------------HHHHHHHHHHHHCEECEEGGGGTCTTEE
T ss_pred HHHHHHHHHHhhCCCceEecCCC--eEEEeEEcCCCCC--------------HHHHHHHHHHhCCEEEeChhhhCCCCeE
Confidence 45667778888888888775443 3333333343311 12456666 5667777767666667899
Q ss_pred EEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 157 RFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 157 RfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
|+++...+.|++++++.+.+.-+++
T Consensus 347 Ri~~~~~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 347 RLGFACEQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp EECCCSCHHHHHHHHHHHHHHHGGG
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHH
Confidence 9999877778888888887765543
No 22
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=89.21 E-value=2.3 Score=37.32 Aligned_cols=93 Identities=14% Similarity=0.068 Sum_probs=62.0
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCC----CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPG----WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE 148 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~----waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~ 148 (276)
.....+.++.|.+.+++.|+++++.+.. -+++.+|++ |.. + ..++.+.|.+.+.....|.
T Consensus 307 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~-----------~~~~~~~l~~~gi~v~~~~ 370 (420)
T 1t3i_A 307 HNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNV-AGL----H-----------ASDVATMVDQDGIAIRSGH 370 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEE-TTB----C-----------HHHHHHHHHTTTEECBCSC
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEE-CCC----C-----------HHHHHHHHHHCCeEEeecc
Confidence 3344567788888899888999886642 357777763 421 0 1245667776665555442
Q ss_pred c-------cCC-ceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 149 G-------TDG-LACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ~-------~~G-~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
. ..| ..+||+++- .++.|++.+++.+.+..+++
T Consensus 371 ~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 371 HCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp TTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred ccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 123 679999988 48889999999988776543
No 23
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=89.17 E-value=1.9 Score=37.90 Aligned_cols=94 Identities=15% Similarity=0.078 Sum_probs=61.5
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGE 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~ 148 (276)
+.....+.++.|.+.+++ +++++..+.. .+++.+|++ |.++. . .++.++|.+. +..+..|.
T Consensus 291 ~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~-~~~~~-------~-------~~l~~~L~~~~gi~v~~g~ 354 (416)
T 3isl_A 291 RFERHRHHEAALAAGIKA-MGLRLFGDDSCKMPVVTCVEI-PGGID-------G-------ESVRDMLLAQFGIEIASSF 354 (416)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCBCSCGGGBCTTEEEEEC-CTTCC-------H-------HHHHHHHHHHHCEECBCCC
T ss_pred HHHHHHHHHHHHHHHHHH-cCCEeccCccccCCcEEEEeC-CCCCC-------H-------HHHHHHHHHhCCEEEecCC
Confidence 344455677888888887 5887775543 235666655 43311 1 2466677554 77777665
Q ss_pred ccCCceeEEEEe---cCCcccHHHHHHHHHHHhHhH
Q psy13413 149 GTDGLACVRFGM---VTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ~~~G~~CVRfGM---vT~d~DV~ELVd~I~~~GrEI 181 (276)
...+..+||++. .+.+.|++++++.+.+..+++
T Consensus 355 ~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 355 GPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp STTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 445567999998 566666999999998876654
No 24
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=88.94 E-value=3.4 Score=35.72 Aligned_cols=102 Identities=8% Similarity=0.045 Sum_probs=65.8
Q ss_pred hhhhhhHHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcce
Q psy13413 65 FFVTHVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAF 144 (276)
Q Consensus 65 ~l~~~i~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aF 144 (276)
.|++++..+....+.++.+.+.+++.|++++...+.-++...+++-... . . -..++.++|.+.+..+
T Consensus 252 ~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-------~--~----~~~~l~~~l~~~GV~v 318 (359)
T 3pj0_A 252 YFEKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA-------D--E----IGAILTKIQDETGVGI 318 (359)
T ss_dssp HHHHHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH-------H--H----HHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc-------c--h----hHHHHHHHHHhcCcEe
Confidence 4667777788778888899999998899987643444445445442211 0 1 1235677777767766
Q ss_pred eccccc--CCceeEEEEecCC--cccHHHHHHHHHHHhH
Q psy13413 145 SLGEGT--DGLACVRFGMVTA--ETDITELLSLVEETGQ 179 (276)
Q Consensus 145 ssG~~~--~G~~CVRfGMvT~--d~DV~ELVd~I~~~Gr 179 (276)
..|..+ .|..++|+.+-+. ..+.+++.+.+.+.++
T Consensus 319 ~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~ 357 (359)
T 3pj0_A 319 SGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK 357 (359)
T ss_dssp CSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred cCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence 665432 5678999988743 3466777666666554
No 25
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=88.43 E-value=3.1 Score=38.82 Aligned_cols=94 Identities=13% Similarity=0.099 Sum_probs=64.3
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.++....+.++.|.+.+++.++++++.++ .+ .+.+.+..+. ..++.++|.+.+..+ .|.
T Consensus 377 ~~~~~~~~~~~~l~~~L~~~~g~~~~~~~--~~--~~~~~~~~~~--------------~~~l~~~L~~~Gi~v-~g~-- 435 (514)
T 3mad_A 377 DATRRILQAADRLKAGVRAIPSLKILGDP--LW--VIAVASDELN--------------IYQVMEEMAGRGWRL-NGL-- 435 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHTSTTCEESSCC--SS--EEEEECSSSC--------------HHHHHHHHHTTTCBC-EEE--
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEeCCC--eE--EEEEeCCCCC--------------HHHHHHHHHhcCCEe-ccC--
Confidence 45666778889999999998999988665 24 4444443311 124677777766555 232
Q ss_pred CCceeEEEEec---CCcccHHHHHHHHHHHhHhHHHhH
Q psy13413 151 DGLACVRFGMV---TAETDITELLSLVEETGQQEEESW 185 (276)
Q Consensus 151 ~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEIEess 185 (276)
....++|+++. +++.||+++++.+.+..+++.++.
T Consensus 436 ~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~~ 473 (514)
T 3mad_A 436 HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAHP 473 (514)
T ss_dssp TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 22357999876 567899999999998887776543
No 26
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=87.98 E-value=2 Score=37.32 Aligned_cols=88 Identities=17% Similarity=0.175 Sum_probs=59.5
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecC-CCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDM-PGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~-~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
+.....+.++.|.+.+++.++++++.+ +.-+++..|++ |.+. . ..++.++|.+.+.....|.
T Consensus 298 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~-~~~~-------~-------~~~~~~~l~~~gi~v~~~~-- 360 (390)
T 1elu_A 298 RYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTV-DSPL-------G-------HRAIVQKLEEQRIYLRTIA-- 360 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEE-CSSS-------C-------HHHHHHHHHHTTEECEEET--
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEc-CCCC-------C-------HHHHHHHHHHCCEEEEecC--
Confidence 344455677888888888889998754 34557777854 4331 0 1256777766666665443
Q ss_pred CCceeEEEEec--CCcccHHHHHHHHHHH
Q psy13413 151 DGLACVRFGMV--TAETDITELLSLVEET 177 (276)
Q Consensus 151 ~G~~CVRfGMv--T~d~DV~ELVd~I~~~ 177 (276)
+..+||++.- .++.|++++++.+.+.
T Consensus 361 -~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 -DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp -TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred -CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 4578999973 7888999998887653
No 27
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=87.85 E-value=2.4 Score=37.12 Aligned_cols=93 Identities=13% Similarity=0.044 Sum_probs=58.3
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC---CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG---WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLG 147 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~---waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG 147 (276)
+.....+.++.|.+.+++. +++++.+.. ++++..|++ |.+. + ..++.++|.+ .+.....|
T Consensus 283 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~---~-----------~~~~~~~L~~~~gi~v~~g 346 (396)
T 2ch1_A 283 QIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMI-PKGV---D-----------WWKVSQYAMNNFSLEVQGG 346 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEEC-CTTC---C-----------HHHHHHHHHHHHCBCCBCC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEc-CCCC---C-----------HHHHHHHHHHhCCEEEecC
Confidence 3444556677888888776 777765542 334667765 4331 0 1245666654 36655544
Q ss_pred cccCCceeEEEEe-c--CCcccHHHHHHHHHHHhHh
Q psy13413 148 EGTDGLACVRFGM-V--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 148 ~~~~G~~CVRfGM-v--T~d~DV~ELVd~I~~~GrE 180 (276)
....+..+||+++ . +++.|++++++.+.+.-++
T Consensus 347 ~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 347 LGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp CGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 4444567999998 3 4788899999988876554
No 28
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=87.83 E-value=2.9 Score=36.07 Aligned_cols=92 Identities=10% Similarity=0.056 Sum_probs=57.2
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.....+.++.|.+.+++ ++++++.+.. .++...|++. ++ + . .++.++|.+.+..+..|..+
T Consensus 262 ~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~--~~---~----~-------~~~~~~l~~~gi~v~~g~~~ 324 (384)
T 1eg5_A 262 AKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFP--NI---R----G-------STLQNLLSGYGIYVSTSSAC 324 (384)
T ss_dssp HHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECT--TC---C----H-------HHHHHHHHHTTEECBC----
T ss_pred HHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeC--CC---C----H-------HHHHHHHhhCCeEEeccccc
Confidence 33445667788888887 7888775432 3456677652 21 1 1 24566676656555544322
Q ss_pred C-------------------CceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 151 D-------------------GLACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 151 ~-------------------G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
. +..+|||++- .++.|++++++.+.+.-+++
T Consensus 325 ~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 325 TSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp --------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1 2479999987 68889999999888765543
No 29
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=87.73 E-value=4.6 Score=37.26 Aligned_cols=93 Identities=12% Similarity=0.184 Sum_probs=62.3
Q ss_pred hHHHHHhHHHHHHHHHHHhc-CCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc
Q psy13413 70 VDILQATVAHKASFISLVEA-SPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE 148 (276)
Q Consensus 70 i~iL~~TI~lr~~F~elVe~-~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~ 148 (276)
-..+....+.++.|.+.+++ -|+++++.++.. ++.+|+. .++ . -.++.++|.+.+..+..+.
T Consensus 344 ~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~-~~v~~~~--~~~-------~-------~~~l~~~L~~~Gi~v~~~~ 406 (497)
T 3mc6_A 344 IESCQEIVGAAMKFKKYIQENIPDLDIMGNPRY-SVISFSS--KTL-------N-------IHELSDRLSKKGWHFNALQ 406 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCS-SEEEEEC--TTT-------T-------HHHHHHHHHTTTCBCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCe-eEEEEeC--CCC-------C-------HHHHHHHHHhCCEEEecCC
Confidence 34566778888999999999 599998866554 6666652 220 0 1346677777676665433
Q ss_pred ccCCceeEEEEec-CCcccHHHHHHHHHHHhHhHH
Q psy13413 149 GTDGLACVRFGMV-TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 149 ~~~G~~CVRfGMv-T~d~DV~ELVd~I~~~GrEIE 182 (276)
. ..++|+++. .++.|++++++.+.+.-+++.
T Consensus 407 ~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~ 438 (497)
T 3mc6_A 407 K---PVALHMAFTRLSAHVVDEICDILRTTVQELK 438 (497)
T ss_dssp S---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHT
T ss_pred C---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 236777766 577899999988887766543
No 30
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=87.58 E-value=5.3 Score=34.72 Aligned_cols=88 Identities=16% Similarity=0.135 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc------
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG------ 149 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~------ 149 (276)
..+.++.|.+.+++.|+++++.+..-+++..|++ |.. + ..++.+.|.+.+..+..|..
T Consensus 306 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~----~-----------~~~~~~~l~~~gi~v~~g~~~~~~~~ 369 (406)
T 1kmj_A 306 EQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNL-GKH----H-----------AYDVGSFLDNYGIAVRTGHHCAMPLM 369 (406)
T ss_dssp HHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEE-TTC----C-----------HHHHHHHHHHTTEECEEECTTCHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEE-CCC----C-----------HHHHHHHHhhCCcEEEeccccchHHH
Confidence 3467888888898888999886531357777764 421 0 12466677776766665542
Q ss_pred --cCCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 150 --TDGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 150 --~~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
.+...+||+++- .++.|++.+++.+.+..+
T Consensus 370 ~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~ 403 (406)
T 1kmj_A 370 AYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHR 403 (406)
T ss_dssp HHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHH
Confidence 122579999988 478899999998877654
No 31
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=87.53 E-value=3 Score=35.68 Aligned_cols=86 Identities=17% Similarity=0.157 Sum_probs=56.0
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCC
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDG 152 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G 152 (276)
+....+.++.|.+.+++.++++++.+.. +....+++ | .++.++|.+.+..+..|. + +
T Consensus 266 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~-~-------------------~~~~~~l~~~gi~v~~g~-~-~ 322 (356)
T 1v72_A 266 ARKANAAAQRLAQGLEGLGGVEVLGGTE-ANILFCRL-D-------------------SAMIDALLKAGFGFYHDR-W-G 322 (356)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESCCC-SSEEEEEE-C-------------------HHHHHHHHHTTCBCBCSS-S-S
T ss_pred HHHHHHHHHHHHHHHhhCCCcEEccCCC-ccEEEEEc-C-------------------HHHHHHHHhcCeEEeccc-c-C
Confidence 3344566778888888778888765433 24444543 1 157777877777766554 2 2
Q ss_pred ceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 153 LACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 153 ~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
..++|+++- .++.|++++++.+.+.-++.
T Consensus 323 ~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 353 (356)
T 1v72_A 323 PNVVRFVTSFATTAEDVDHLLNQVRLAADRT 353 (356)
T ss_dssp TTEEEEECCTTCCHHHHHHHHHHHHHTC---
T ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 678999854 57889999999888765543
No 32
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=87.01 E-value=3.3 Score=35.83 Aligned_cols=88 Identities=18% Similarity=0.140 Sum_probs=57.6
Q ss_pred HHHhHHHHHHHHHHH-hcCCCeeeecCC----CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecc
Q psy13413 73 LQATVAHKASFISLV-EASPKLTLVDMP----GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLG 147 (276)
Q Consensus 73 L~~TI~lr~~F~elV-e~~psLelVe~~----~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG 147 (276)
.....+.++.|.+.+ ++. +++++.+. ...++..|++ |. ..++.++|.+.+.....|
T Consensus 283 ~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~l~~~gi~v~~g 343 (385)
T 2bkw_A 283 WDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYV-AD-----------------PPDVIAFLKSHGVVIAGG 343 (385)
T ss_dssp HHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEEC-SC-----------------HHHHHHHHHHTTEECBCC
T ss_pred HHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEec-CC-----------------HHHHHHHHHHCCeEEeCC
Confidence 344456777888888 765 78776432 1345666654 21 235777777666666655
Q ss_pred ccc-CCceeEEEE-ec-----CCcccHHHHHHHHHHHhH
Q psy13413 148 EGT-DGLACVRFG-MV-----TAETDITELLSLVEETGQ 179 (276)
Q Consensus 148 ~~~-~G~~CVRfG-Mv-----T~d~DV~ELVd~I~~~Gr 179 (276)
... .+..++|++ +. .++.|++++++.+.+..+
T Consensus 344 ~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 344 IHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp CCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred CCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 432 346899999 64 588899999998877644
No 33
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=86.65 E-value=3.6 Score=36.05 Aligned_cols=95 Identities=14% Similarity=0.042 Sum_probs=60.6
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGE 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~ 148 (276)
+.....+.++.|.+.+++. ++++..+.. .+.+..|++ |.++. . .++.++|.+. +..+..|.
T Consensus 291 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~-------~-------~~l~~~l~~~~gi~v~~g~ 354 (411)
T 3nnk_A 291 GIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVI-PQGIN-------G-------DQARKLMLEDFGIEIGTSF 354 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEEC-CTTCC-------H-------HHHHHHHHHHHSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEEC-CCCCC-------H-------HHHHHHHHHhcCeEEeCcc
Confidence 3445556778888888865 777664432 235566654 43311 1 2466666554 66666554
Q ss_pred ccCCceeEEEEe-c--CCcccHHHHHHHHHHHhHhHH
Q psy13413 149 GTDGLACVRFGM-V--TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 149 ~~~G~~CVRfGM-v--T~d~DV~ELVd~I~~~GrEIE 182 (276)
...+..|||++. - +++.||+++++.+.+..+++.
T Consensus 355 ~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 355 GPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp GGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 444456999997 3 578899999999988876543
No 34
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=86.44 E-value=5.1 Score=33.94 Aligned_cols=91 Identities=16% Similarity=0.131 Sum_probs=58.7
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC-CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG-WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~-waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
+.....+.++.|.+.+++. +++++.+.. -.++.+|++ |.+. . ..++.++|.+.+..+..|...
T Consensus 256 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~-~~~~-------~-------~~~~~~~l~~~gi~v~~g~~~ 319 (353)
T 2yrr_A 256 RERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRP-PEGV-------D-------ADRLVRALYAEGVAVAGGIGP 319 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEEC-CTTC-------C-------HHHHHHHHHHTTEECEECCGG
T ss_pred HHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEEC-CCCC-------C-------HHHHHHHHHHCCEEEeCCccc
Confidence 3444556778888888876 888776432 335666764 4331 0 135667776667776666655
Q ss_pred CCceeEEEEec--CCcccHH-HHHHHHHHHh
Q psy13413 151 DGLACVRFGMV--TAETDIT-ELLSLVEETG 178 (276)
Q Consensus 151 ~G~~CVRfGMv--T~d~DV~-ELVd~I~~~G 178 (276)
.+..+||++.- .++.|+. ++++.+.+.-
T Consensus 320 ~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l 350 (353)
T 2yrr_A 320 TRGQVLRLGLMGEGARREAYQAFLKALDRAL 350 (353)
T ss_dssp GTTTCEEEECSGGGSCHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 55678999983 6677777 8888776653
No 35
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=86.43 E-value=4.2 Score=35.73 Aligned_cols=88 Identities=13% Similarity=0.107 Sum_probs=55.9
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCC-CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc----
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPG-WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE---- 148 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~-waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~---- 148 (276)
....+.++.|.+.+++.|++++..+.. -.++..|++ | +. . ..++.++|.+.+.....|.
T Consensus 306 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~-~~-------~-------~~~~~~~L~~~gi~v~~g~~~~~ 369 (406)
T 3cai_A 306 AYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAV-H-KV-------P-------ADRVVQRLADNGILAIANTGSRV 369 (406)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEE-T-TB-------C-------HHHHHHHHHHTTEECEECCSCHH
T ss_pred HHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEE-C-Cc-------C-------HHHHHHHHHHCCcEEecCChHHH
Confidence 334467888888898888888775532 234566654 2 10 0 1246666766566555543
Q ss_pred ----cc-CCceeEEEEecC--CcccHHHHHHHHHHH
Q psy13413 149 ----GT-DGLACVRFGMVT--AETDITELLSLVEET 177 (276)
Q Consensus 149 ----~~-~G~~CVRfGMvT--~d~DV~ELVd~I~~~ 177 (276)
+. .+..+||+++-. ++.|++++++.+.+.
T Consensus 370 ~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 370 LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 11 235799999884 678999998887653
No 36
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=86.17 E-value=4.3 Score=36.70 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHH-hcCCcceecccccCCcee
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTL-RTSDAAFSLGEGTDGLAC 155 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kL-qesd~aFssG~~~~G~~C 155 (276)
-+.|+.|.+.+++.|++.++.+..- -...++.-...+.+... ..+++++| ++.+..+..|..+.+..+
T Consensus 330 ~~~~~~l~~~L~~~~g~~~~~p~~g-~~~~~~l~~~~~~~~~~----------~~~~~~~l~~~~gV~v~~g~~~~~~~~ 398 (427)
T 3dyd_A 330 KSNADLCYGALAAIPGLRPVRPSGA-MYLMVGIEMEHFPEFEN----------DVEFTERLVAEQSVHCLPATCFEYPNF 398 (427)
T ss_dssp HHHHHHHHHHHHHSTTEEEECCSBT-TEEEEEECGGGCTTCSS----------HHHHHHHHHHHHCEECEEGGGGTCTTE
T ss_pred HHHHHHHHHHHhcCCCceecCCCee-EEEEEecCHhhcCCCCC----------HHHHHHHHHHHCCEEEECCcccCCCCe
Confidence 3466778888888888887644321 12222221111000000 13466666 456777777766666789
Q ss_pred EEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 156 VRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 156 VRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
+|+++.+++.+|+++++.+.+.-++
T Consensus 399 iRis~~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 399 IRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp EEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHHHH
Confidence 9999988888888888887765443
No 37
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=85.92 E-value=2 Score=38.69 Aligned_cols=99 Identities=8% Similarity=0.086 Sum_probs=56.6
Q ss_pred hHHHHHhH-HHHHHHHHHHhcC-C---CeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcce
Q psy13413 70 VDILQATV-AHKASFISLVEAS-P---KLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAF 144 (276)
Q Consensus 70 i~iL~~TI-~lr~~F~elVe~~-p---sLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aF 144 (276)
++-+...+ +.++.|.+.+++. | +++++.+. -.-...+++ |.+++. .++.++|.+.+..+
T Consensus 313 ~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~-~g~~~~~~~-~~~~~~--------------~~l~~~l~~~gi~v 376 (425)
T 1vp4_A 313 LKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSE-GGLFIWLTL-PEGFDT--------------WEMFEYAKRKKVFY 376 (425)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCS-BSSEEEEEC-CTTCCT--------------TTTHHHHHHHTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCC-ccEEEEEEc-CCCCCH--------------HHHHHHHHHCCCEE
Confidence 44443333 3456677777663 5 57776432 212444544 433111 13455555445555
Q ss_pred eccccc----CCceeEEEEecC-CcccHHHHHHHHHHHhHhHHHh
Q psy13413 145 SLGEGT----DGLACVRFGMVT-AETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 145 ssG~~~----~G~~CVRfGMvT-~d~DV~ELVd~I~~~GrEIEes 184 (276)
..|..+ .+..||||+... ++.|++++++.+.+.-+++..+
T Consensus 377 ~~g~~f~~~~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 377 VPGRVFKVYDEPSPSMRLSFCLPPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp EEGGGGCTTCCCCSEEEEECSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECchhhcCCCCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 555433 246899999986 5788999998888776655443
No 38
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=85.85 E-value=6.9 Score=33.70 Aligned_cols=92 Identities=17% Similarity=0.149 Sum_probs=59.7
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCC---CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMP---GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~---~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~ 148 (276)
+.....+.++.|.+.+++. ++++..+. .-.++..|++-. . . ..++.++|.+.+.....|.
T Consensus 267 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~-~--------------~~~~~~~l~~~gi~v~~g~ 329 (384)
T 3zrp_A 267 RIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKV-A-D--------------PQKVLAGTVNEGVEFAPGV 329 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSS-S-C--------------HHHHHHHHHTTTCCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCC-C-C--------------HHHHHHHHHHCCEEEecCC
Confidence 3344556777888888887 78877655 123555666522 1 0 1346777777666666544
Q ss_pred ccCCceeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 149 GTDGLACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
... ..+||+++- +++.|++++++.+.+.-+++
T Consensus 330 ~~~-~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 330 HPA-FKYFRIGHMGWVTPNDAIIAISVIERTLRKL 363 (384)
T ss_dssp CTT-CCEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CCC-cCEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence 222 289999977 67889999999988776654
No 39
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=84.89 E-value=2.3 Score=36.89 Aligned_cols=94 Identities=13% Similarity=0.132 Sum_probs=59.8
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCC---CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceecc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPG---WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLG 147 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~---waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG 147 (276)
+.....+.++.|.+.+++. ++++..+.. .+.+..|++ |.+. .. .++.++|.+. +..+..|
T Consensus 288 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~-~~~~-------~~-------~~~~~~l~~~~gi~v~~g 351 (393)
T 3kgw_A 288 CWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTV-PAGY-------NW-------RDIVSYVLDHFSIEISGG 351 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEEC-CTTB-------CH-------HHHHHHHHHHHCEECBCC
T ss_pred HHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeC-CCCC-------CH-------HHHHHHHHHhCCEEEeCC
Confidence 3445566778888888877 777653221 123445544 4331 11 2466667654 7777666
Q ss_pred cccCCceeEEEEe-c--CCcccHHHHHHHHHHHhHhH
Q psy13413 148 EGTDGLACVRFGM-V--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 148 ~~~~G~~CVRfGM-v--T~d~DV~ELVd~I~~~GrEI 181 (276)
....+..+||++. . +++.|++++++.+.+.-+++
T Consensus 352 ~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 352 LGPTEERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp CGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 6555567999997 4 58889999999998876554
No 40
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=84.72 E-value=3 Score=36.58 Aligned_cols=89 Identities=12% Similarity=0.145 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecccccCCce
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEGTDGLA 154 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~~~G~~ 154 (276)
..+.++.|.+.+++.|+++++.+. +|.-.+-.+|.. . .. ..++.++|.+ .+..+..|..+....
T Consensus 296 ~~~~~~~l~~~L~~~~g~~~~~~~--~~~~~~~~~~~~--~----~~-------~~~~~~~l~~~~gi~v~~g~~~~~~~ 360 (388)
T 1j32_A 296 FAERRRYMLDALNAMPGLECPKPD--GAFYMFPSIAKT--G----RS-------SLDFCSELLDQHQVATVPGAAFGADD 360 (388)
T ss_dssp HHHHHHHHHHHHHTCTTCBCCCCC--BTTEECCBCGGG--T----CC-------HHHHHHHHHHHHCEECEEGGGGTCTT
T ss_pred HHHHHHHHHHHHhhCCCCcccCCC--eeEEEEEecCCC--C----CC-------HHHHHHHHHHhCCEEEeChhhhCCCC
Confidence 345677788888888888766443 122111111210 0 00 1356667754 566666665554467
Q ss_pred eEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 155 CVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 155 CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
|||++..+++.|++++++.+.+.-+
T Consensus 361 ~iRis~~~~~~~i~~~~~~l~~~l~ 385 (388)
T 1j32_A 361 CIRLSYATDLDTIKRGMERLEKFLH 385 (388)
T ss_dssp BEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCHHHHHHHHHHHHHHHH
Confidence 8999998877788888877765543
No 41
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=84.04 E-value=3.6 Score=36.59 Aligned_cols=92 Identities=10% Similarity=0.073 Sum_probs=55.2
Q ss_pred HhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--
Q psy13413 75 ATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD-- 151 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~-- 151 (276)
...+.++.|.+.+++.|+++++.+. .|.-.+-.+|..+ ..+ ..++.++|. +.+..+..|..+.
T Consensus 308 ~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-----------~~~l~~~l~~~~gi~v~~g~~f~~~ 373 (406)
T 1xi9_A 308 KLKERRDYIYKRLNEIPGISTTKPQ--GAFYIFPKIEVGP-WKN-----------DKEFVLDVLHNAHVLFVHGSGFGEY 373 (406)
T ss_dssp HHHHHHHHHHHHHHTSTTEECCCCC--BSSEECCEECSCS-CSS-----------HHHHHHHHHHHHCEECEEGGGGCGG
T ss_pred HHHHHHHHHHHHHHhCCCCeeecCC--eeEEEEEecCccC-CCC-----------HHHHHHHHHHhCCEEEeCchhcCCC
Confidence 3345677788888888888876433 2433332224311 000 134666664 5566665554442
Q ss_pred CceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
+..+|||+..+++.+|+++++.+.+.-++
T Consensus 374 ~~~~lRis~~~~~~~i~~~~~~l~~~l~~ 402 (406)
T 1xi9_A 374 GAGHFRAVFLPPIEILEEAMDRFEKFMKE 402 (406)
T ss_dssp GTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 36799999987777888888887765443
No 42
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=83.82 E-value=4.7 Score=34.94 Aligned_cols=87 Identities=16% Similarity=0.202 Sum_probs=54.3
Q ss_pred HhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-CcceecccccCCc
Q psy13413 75 ATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGTDGL 153 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~~G~ 153 (276)
...+.++.|.+.+++. ++++.....-.++..++ |.++. . .++.++|.+. +..+..|....+.
T Consensus 282 ~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~--~~~~~-------~-------~~l~~~l~~~~gi~v~~g~~~~~~ 344 (376)
T 3f0h_A 282 RIASQAADFRAKIKDL-PFELVSESPANGVTSVH--PTTAN-------A-------YDIFLKLKDEYGIWICPNGGEMKD 344 (376)
T ss_dssp HHHHHHHHHHHHTTTS-SEEECCSSBBTTEEEEE--ESSSC-------H-------HHHHHHHHHHSSEECEECCGGGTT
T ss_pred HHHHHHHHHHHHHHHc-CCccCccccCceEEEEe--CCCCC-------H-------HHHHHHHHHhCCEEEecCccccCC
Confidence 3345677777777765 46666543333444443 44311 1 2467777765 7777766444456
Q ss_pred eeEEEEec--CCcccHHHHHHHHHHHh
Q psy13413 154 ACVRFGMV--TAETDITELLSLVEETG 178 (276)
Q Consensus 154 ~CVRfGMv--T~d~DV~ELVd~I~~~G 178 (276)
.+||++.- +++.|++++++.+.+.-
T Consensus 345 ~~lRis~~~~~t~e~i~~~~~~l~~~l 371 (376)
T 3f0h_A 345 TIFRVGHIGALTHEDNTTLVNAFKDLQ 371 (376)
T ss_dssp TCEEEECCSSCCHHHHHHHHHHHHHHH
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 79999984 67888888888876653
No 43
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=83.78 E-value=5.9 Score=34.10 Aligned_cols=83 Identities=11% Similarity=0.175 Sum_probs=57.3
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
.+....+.++.|.+.+++. ++.++.++.. ++..|++.. ..++.++|.+.+.....|..
T Consensus 310 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~~~~------------------~~~~~~~l~~~gi~v~~~~~-- 367 (397)
T 3f9t_A 310 IVNECMENTLYLYKKLKEN-NFKPVIEPIL-NIVAIEDED------------------YKEVCKKLRDRGIYVSVCNC-- 367 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBSSCCSS-SEEEEECTT------------------HHHHHHHHHHTTCBCEECSS--
T ss_pred HHHHHHHHHHHHHHHHHHC-CCEEEcCCCc-cEEEEEeCC------------------HHHHHHHHHhCCeEEeccCC--
Confidence 4455567788888888888 8887766554 666665421 14577778776666554432
Q ss_pred CceeEEEEec--CCcccHHHHHHHHHHH
Q psy13413 152 GLACVRFGMV--TAETDITELLSLVEET 177 (276)
Q Consensus 152 G~~CVRfGMv--T~d~DV~ELVd~I~~~ 177 (276)
..+|||+.- .++.|++++++.+.+.
T Consensus 368 -~~~~Ri~~~~~~~~e~i~~~~~~l~~~ 394 (397)
T 3f9t_A 368 -VKALRIVVMPHIKREHIDNFIEILNSI 394 (397)
T ss_dssp -SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred -CCEEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 478999987 5778898888887764
No 44
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=83.73 E-value=5.2 Score=36.38 Aligned_cols=87 Identities=15% Similarity=0.094 Sum_probs=56.7
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcce--ecccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAF--SLGEG 149 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aF--ssG~~ 149 (276)
+.....+.++.|.+.+++.|++++..+.+.-....|++ + . -..++.++|.+.+... ..|..
T Consensus 345 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-~-~---------------~~~~~~~~L~~~gi~v~~~~~~~ 407 (438)
T 1wyu_A 345 VALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALAL-P-K---------------DPEAVRRALAERGFHGATPVPRE 407 (438)
T ss_dssp HHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEEC-S-S---------------CHHHHHHHHHHTTCCCCEECCTT
T ss_pred HHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeC-C-C---------------CHHHHHHHHHHCCceeccccccc
Confidence 34455677888999999888999886533224445543 1 0 0235667776666655 22322
Q ss_pred cCCceeEEEEec--CCcccHHHHHHHHHH
Q psy13413 150 TDGLACVRFGMV--TAETDITELLSLVEE 176 (276)
Q Consensus 150 ~~G~~CVRfGMv--T~d~DV~ELVd~I~~ 176 (276)
.+..+||+++. +++.|++.+++.+.+
T Consensus 408 -~~~~~lRis~~~~~t~edi~~~~~~l~~ 435 (438)
T 1wyu_A 408 -YGENLALFAATELHEEEDLLALREALKE 435 (438)
T ss_dssp -SCSSEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred -cCCCeEEEEecccCCHHHHHHHHHHHHH
Confidence 23679999998 677889988888764
No 45
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=83.72 E-value=4.1 Score=35.73 Aligned_cols=89 Identities=12% Similarity=0.088 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCC-CCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceeccccc--C
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPP-AWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEGT--D 151 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~-~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~~--~ 151 (276)
.-+.++.|.+.+++.|++.++.+..- -...+++ |. . .. ..++.++|.+ .+.....|..+ .
T Consensus 312 ~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~~~~~-~~~~-------~~-------~~~~~~~l~~~~gi~v~~g~~~~~~ 375 (407)
T 3nra_A 312 HQAIRDELLHVLRGCEGVFARTPQAG-SYLFPRL-PKLA-------VA-------PAEFVKILRLQAGVVVTPGTEFSPH 375 (407)
T ss_dssp HHHHHHHHHHHHHTSTTCBCCCCSBS-SEECCBC-CCBS-------SC-------HHHHHHHHHHHHCEECEEGGGTCTT
T ss_pred HHHHHHHHHHHHhcCCCceeccCCee-EEEEEeC-CCCC-------CC-------HHHHHHHHHHhCCEEEeCchhhCCC
Confidence 34567788888888888876544321 1111222 21 1 01 1245666643 46666655544 3
Q ss_pred CceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
+..+||+++.+++.||+++++.+.+.-++
T Consensus 376 ~~~~iRis~~~~~~~i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 376 TADSVRLNFSQDHEAAVAAARRIVTLVER 404 (407)
T ss_dssp CTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 57899999998888899988888776554
No 46
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=83.50 E-value=5.9 Score=34.81 Aligned_cols=89 Identities=11% Similarity=0.116 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhc-CCCeeeecCCCCceEEE-EeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--
Q psy13413 77 VAHKASFISLVEA-SPKLTLVDMPGWAGLGG-VRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD-- 151 (276)
Q Consensus 77 I~lr~~F~elVe~-~psLelVe~~~waGLG~-VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~-- 151 (276)
-+.++.|.+.+++ .|++.++.+. +|... +++-..++ + ..++.++|. +.+..+..|..+.
T Consensus 300 ~~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~~~~~~~---~-----------~~~~~~~l~~~~gi~v~~g~~~~~~ 363 (399)
T 1c7n_A 300 DKNQRIVKDFFEVNHPEIKAPLIE--GTYLQWIDFRALKM---D-----------HKAMEEFMIHKAQIFFDEGYIFGDG 363 (399)
T ss_dssp HHHHHHHHHHHHHHCTTSBCCCCS--BSSEEEEECGGGCC---C-----------HHHHHHHHHHTTCCCCEEGGGGCGG
T ss_pred HHHHHHHHHHHHhhCCCCeEecCC--ceEEEEEEcccCCC---C-----------HHHHHHHHHHhCCEEEeCccccCCC
Confidence 3556777787887 6888766433 24332 44421110 0 135777785 5677777665543
Q ss_pred CceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
+..|||++....+.+++++++.+.+.-+++
T Consensus 364 ~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 393 (399)
T 1c7n_A 364 GIGFERINLAAPSSVIQESLERLNKALKDL 393 (399)
T ss_dssp GTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeccCHHHHHHHHHHHHHHHHHH
Confidence 467999999977777888887777665544
No 47
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=83.44 E-value=6 Score=34.29 Aligned_cols=81 Identities=14% Similarity=0.121 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCCcee
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLAC 155 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G~~C 155 (276)
.-+.++.|.+.+++.++++++...+ +...+++ |.. ..++.++|.+.+..+..|..+....+
T Consensus 281 ~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~-~~~----------------~~~~~~~l~~~gi~v~~g~~~~~~~~ 341 (363)
T 3ffh_A 281 NANGIKQYEAFAKRFEKVKLYPANG--NFVLIDL-GIE----------------AGTIFSYLEKNGYITRSGAALGFPTA 341 (363)
T ss_dssp HHHHHHHHHHHHHHCTTCEECCCCS--SEEEEEC-SSC----------------HHHHHHHHHHTTEECEETTTTTCTTE
T ss_pred HHHHHHHHHHHHhhCCCceECCCCC--eEEEEEC-CCC----------------HHHHHHHHHHCCeEEEeCccCCCCCe
Confidence 3456677888888878888764432 3434433 110 13567777777777776666555689
Q ss_pred EEEEecCCcccHHHHHHHHHH
Q psy13413 156 VRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 156 VRfGMvT~d~DV~ELVd~I~~ 176 (276)
||+++. .+.|++++++.+.+
T Consensus 342 iRis~~-~~~~i~~~~~~l~~ 361 (363)
T 3ffh_A 342 VRITIG-KEEDNSAVIALLEK 361 (363)
T ss_dssp EEEECC-CHHHHHHHHHHHHH
T ss_pred EEEECC-CHHHHHHHHHHHHH
Confidence 999976 67788888887764
No 48
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=82.86 E-value=5.6 Score=35.26 Aligned_cols=91 Identities=9% Similarity=-0.007 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHH-hcCCcceecccccCCcee
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTL-RTSDAAFSLGEGTDGLAC 155 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kL-qesd~aFssG~~~~G~~C 155 (276)
-+.++.|.+.+++.|++.++.+.. .-...+++-+..+.+.. . ..++.++| ++.+..+..|..+....+
T Consensus 319 ~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~---~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~ 387 (416)
T 1bw0_A 319 EESAMYLYNHIGECIGLAPTMPRG-AMYLMSRIDLEKYRDIK---T-------DVEFFEKLLEEENVQVLPGTIFHAPGF 387 (416)
T ss_dssp HHHHHHHHHHHTTSTTEEECCCCB-TTEEEEEECGGGBSSCC---S-------HHHHHHHHHHHHCEECEEGGGGTCTTE
T ss_pred HHHHHHHHHHHHhCCCCcccCCCe-eEEEEEeCCHHHcCCCC---C-------HHHHHHHHHHHCCEEEecccccCCCCe
Confidence 345667778888778888664331 11223443211111000 0 13466666 466777776665555679
Q ss_pred EEEEecCCcccHHHHHHHHHHHh
Q psy13413 156 VRFGMVTAETDITELLSLVEETG 178 (276)
Q Consensus 156 VRfGMvT~d~DV~ELVd~I~~~G 178 (276)
+|++..+++.++.++++.+.+.-
T Consensus 388 iRis~~~~~e~l~~~l~~l~~~l 410 (416)
T 1bw0_A 388 TRLTTTRPVEVYREAVERIKAFC 410 (416)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHH
T ss_pred EEEEecCCHHHHHHHHHHHHHHH
Confidence 99999877777777777666543
No 49
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=82.76 E-value=5.4 Score=37.60 Aligned_cols=96 Identities=13% Similarity=0.146 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEE-eecCCCCCCCCchHHHHHHHHH---HHH--HHHHHhcCCcceeccccc
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGV-RYVPPAWGATDTDQAKAELNRL---NIQ--VVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~V-RYvP~~w~~~~~d~~k~ELnKL---N~e--Ll~kLqesd~aFssG~~~ 150 (276)
-+.|+.|.+.+++.|+++++.+. .|+-.+ ++-.+ .+..+..++. ..+ +.+.|++.+..+..|..+
T Consensus 389 ~~~~~~l~~~L~~~~g~~~~~p~--gg~~~~~~l~~p-------~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f 459 (498)
T 3ihj_A 389 AKKAKLTEDLFNQVPGIHCNPLQ--GAMYAFPRIFIP-------AKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGF 459 (498)
T ss_dssp HHHHHHHHHHHHTSTTEECCCCC--BSSEECCEECCC-------HHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGT
T ss_pred HHHHHHHHHHHhcCCCcEecCCC--eEEEEEEeccCc-------hhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCccc
Confidence 34566777788888888876543 233222 22111 1111111111 122 244456667777666654
Q ss_pred ---CCceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 151 ---DGLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 151 ---~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
.|..++|+++...+.|++++++.+.+.-+++
T Consensus 460 ~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~ 493 (498)
T 3ihj_A 460 GQREGTYHFRMTILPPVEKLKTVLQKVKDFHINF 493 (498)
T ss_dssp CCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 3568999999888889999999888776554
No 50
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=82.46 E-value=12 Score=32.33 Aligned_cols=101 Identities=10% Similarity=0.013 Sum_probs=60.9
Q ss_pred hhhhhHHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee
Q psy13413 66 FVTHVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS 145 (276)
Q Consensus 66 l~~~i~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs 145 (276)
|++.+..+....+.++.+.+.+++.|++++...+.-+....+++-... .. -..++.+.|++.+..+.
T Consensus 251 l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~l~~~Gi~v~ 317 (357)
T 3lws_A 251 YELRKDRMGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQA---------AD----ISPKLEQVQEETGLGFV 317 (357)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCH---------HH----HHHHHHHHHHHHCEESC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCCh---------HH----HHHHHHHHHHhcCeEEe
Confidence 555666666667778888888998899998543333356666652211 01 12356666766666555
Q ss_pred ccccc-CCceeEEEEecCCc--ccHHHHHHHHHHHhH
Q psy13413 146 LGEGT-DGLACVRFGMVTAE--TDITELLSLVEETGQ 179 (276)
Q Consensus 146 sG~~~-~G~~CVRfGMvT~d--~DV~ELVd~I~~~Gr 179 (276)
.|... .|..++|+.+-+.. .+.++|.+.+.+..+
T Consensus 318 ~g~~~~~~~~~~r~~i~~~~~~~~~~~l~~al~~l~~ 354 (357)
T 3lws_A 318 GYLVDKDGYCSTEISVGDAYGELDQQTRDAGFARLRQ 354 (357)
T ss_dssp SCCEECSSEEEEEEEBCTTGGGSCHHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEecchhhhcCHHHHHHHHHHHHH
Confidence 44322 57789999887432 455666655555443
No 51
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=82.13 E-value=9 Score=33.13 Aligned_cols=84 Identities=11% Similarity=0.136 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHhc-CCCeeeecCCCCceEEE-EeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--
Q psy13413 77 VAHKASFISLVEA-SPKLTLVDMPGWAGLGG-VRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD-- 151 (276)
Q Consensus 77 I~lr~~F~elVe~-~psLelVe~~~waGLG~-VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~-- 151 (276)
-+.++.|.+.+++ .|++.++.+.. |... +++...++ . ..++.++|. +.+.....|..+.
T Consensus 292 ~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~-------~~~~~~~l~~~~gi~v~~g~~~~~~ 355 (383)
T 3kax_A 292 EDNAKFACEYIKDHIPTLSVMKPEG--SFLLWIDCSALNL-------S-------QDERTKLLEEKGKIIVEPGEKYGLG 355 (383)
T ss_dssp HHHHHHHHHHHHHHCTTCEECCCSB--SSEEEEECGGGCC-------C-------HHHHHHHHHHTSCEECEESGGGCTT
T ss_pred HHHHHHHHHHHHhhCCCceEecCCc--eEEEEEEccccCC-------C-------HHHHHHHHHhhCCEEeECchhhcCC
Confidence 3456777777877 68888775432 3333 44322221 0 135677775 5677776665443
Q ss_pred CceeEEEEecCCcccHHHHHHHHHH
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~ 176 (276)
+..++|+++.+++.|++++++.+.+
T Consensus 356 ~~~~iRi~~~~~~~~i~~~l~~l~~ 380 (383)
T 3kax_A 356 GEEHIGINIGCPRSVLEEILNRLRH 380 (383)
T ss_dssp CTTEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 4689999999888888888877654
No 52
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=81.70 E-value=12 Score=34.30 Aligned_cols=93 Identities=18% Similarity=0.255 Sum_probs=54.6
Q ss_pred hHHHHHhH-HHHHHHHHHHhc-CC-CeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee
Q psy13413 70 VDILQATV-AHKASFISLVEA-SP-KLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS 145 (276)
Q Consensus 70 i~iL~~TI-~lr~~F~elVe~-~p-sLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs 145 (276)
+..+...+ +.|+.|.+.+++ .| +++++.+.. |. ..+++ |.++ + -.++.++|.+.+..+.
T Consensus 342 ~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~--g~~~~v~~-~~~~---~-----------~~~l~~~l~~~gV~v~ 404 (448)
T 3aow_A 342 IPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEG--GMFIWVTL-PDGI---D-----------SKKMLERAIKKGVAYV 404 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSB--SSEEEEEC-STTC---C-----------HHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCc--cEEEEEEc-CCCC---C-----------HHHHHHHHHHCCcEEE
Confidence 44444444 345667777776 46 577664332 32 23333 4331 0 1356667766576666
Q ss_pred ccccc----CCceeEEEEecC-CcccHHHHHHHHHHHhH
Q psy13413 146 LGEGT----DGLACVRFGMVT-AETDITELLSLVEETGQ 179 (276)
Q Consensus 146 sG~~~----~G~~CVRfGMvT-~d~DV~ELVd~I~~~Gr 179 (276)
.|..+ .+..++|+++.. ++.||+++++.+.+.-+
T Consensus 405 pg~~f~~~~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~ 443 (448)
T 3aow_A 405 PGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIK 443 (448)
T ss_dssp EGGGGSTTCCCCSEEEEECSSSCTHHHHHHHHHHHHHHH
T ss_pred cchhhcCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 66544 246899999875 57788888887776544
No 53
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=80.87 E-value=8.3 Score=33.74 Aligned_cols=96 Identities=13% Similarity=0.072 Sum_probs=59.8
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc---
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE--- 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~--- 148 (276)
+.....+.++.|.+.+++. +++++.+..-..+..+++-+.++ .. .++.+.|.+.+.....|.
T Consensus 281 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-------~~-------~~~~~~l~~~gi~v~~g~~~~ 345 (405)
T 2vi8_A 281 YAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQL-------TG-------KTAEKVLDEVGITVNKNTIPY 345 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC-------CH-------HHHHHHHHHHTEECEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCCC-------CH-------HHHHHHHHHcCceeccCcCcc
Confidence 3444556677888888877 88887654333566666532220 01 235555655555554432
Q ss_pred --c-cCCceeEEEEecC------CcccHHHHHHHHHHHhHhHH
Q psy13413 149 --G-TDGLACVRFGMVT------AETDITELLSLVEETGQQEE 182 (276)
Q Consensus 149 --~-~~G~~CVRfGMvT------~d~DV~ELVd~I~~~GrEIE 182 (276)
. ..+..++|++.-. ++.|++++++.+.+.-++++
T Consensus 346 ~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~ 388 (405)
T 2vi8_A 346 DPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG 388 (405)
T ss_dssp CSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred ccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence 1 1234579999873 68899999999998877775
No 54
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=80.72 E-value=6.8 Score=34.14 Aligned_cols=92 Identities=11% Similarity=0.137 Sum_probs=57.4
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEG 149 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~ 149 (276)
.....+.++.|.+.+++. ++.++.+.. -.++..|++ |.+. .. .++.++|.+ .+.....|..
T Consensus 285 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~-------~~-------~~~~~~L~~~~gi~v~~g~~ 348 (393)
T 2huf_A 285 IARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKV-PQGV-------DW-------LKAAQYAMKTYLVEISGGLG 348 (393)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEEC-CTTC-------CH-------HHHHHHHHHHHCEECBCCCG
T ss_pred HHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEc-CCCC-------CH-------HHHHHHHHHhCCEEEecCcc
Confidence 344456778888888876 777665432 123666665 3220 01 245666654 3655555544
Q ss_pred cCCceeEEEEe-c--CCcccHHHHHHHHHHHhHh
Q psy13413 150 TDGLACVRFGM-V--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 150 ~~G~~CVRfGM-v--T~d~DV~ELVd~I~~~GrE 180 (276)
..+..+||+++ . +++.|++++++.+.+..++
T Consensus 349 ~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 349 PTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred cccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 44567999999 4 5677899999988776554
No 55
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=80.70 E-value=11 Score=33.11 Aligned_cols=87 Identities=10% Similarity=0.113 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhc-CCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccccc----C
Q psy13413 78 AHKASFISLVEA-SPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGT----D 151 (276)
Q Consensus 78 ~lr~~F~elVe~-~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~----~ 151 (276)
+.++.|.+.+++ .|+++++.+..- -...|++ |.++. ..++.++|.+. +..+..|..+ .
T Consensus 310 ~~~~~l~~~L~~~~~~~~~~~~~~~-~~~~~~~-~~~~~--------------~~~l~~~l~~~~gi~v~~g~~~~~~~~ 373 (407)
T 2zc0_A 310 EKRDIMLKALENHLPNAEFTKPIAG-MFVMFFL-PEGAD--------------GISFANELMEREGVVVVPGKPFYTDES 373 (407)
T ss_dssp HHHHHHHHHHHHHCTTSCBCCCSBS-SEEEEEC-STTCC--------------HHHHHHHHHHHTCEECBCSGGGCSSSC
T ss_pred HHHHHHHHHHHHhCCCCEEecCCCc-EEEEEEc-CCCCC--------------HHHHHHHHHHhCCeEEECchhccCCCC
Confidence 355677777776 477776543211 2344544 33210 12456666554 6666555433 2
Q ss_pred CceeEEEEecC-CcccHHHHHHHHHHHhHh
Q psy13413 152 GLACVRFGMVT-AETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 G~~CVRfGMvT-~d~DV~ELVd~I~~~GrE 180 (276)
+..+||++... ++.|++++++.+.+.-++
T Consensus 374 ~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 374 GKNAIRLNFSRPSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp CTTEEEEECSSSCTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999886 588999999988776543
No 56
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=80.36 E-value=14 Score=32.41 Aligned_cols=94 Identities=11% Similarity=0.030 Sum_probs=54.7
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceec------
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSL------ 146 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFss------ 146 (276)
.....+.++.|.+.+++ .+++++....-..+..+...+.++ .. .++.+.|++.+..+..
T Consensus 291 ~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------~~-------~~~~~~l~~~gi~v~~~~~~~~ 355 (420)
T 3gbx_A 291 QQQVAKNAKAMVEVFLN-RGYKVVSGGTENHLFLLDLVDKNL-------TG-------KEADAALGRANITVNKNSVPND 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGTC-------CH-------HHHHHHHHHTTEECEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHh-cCCeeccCCCCCeEEEEEcCCCCC-------CH-------HHHHHHHHHCCcEeccccCCCC
Confidence 44455667778887776 678877643333455555443331 11 2344556555555443
Q ss_pred -ccccCCceeEEEEec------CCcccHHHHHHHHHHHhHhHH
Q psy13413 147 -GEGTDGLACVRFGMV------TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 147 -G~~~~G~~CVRfGMv------T~d~DV~ELVd~I~~~GrEIE 182 (276)
|+.+ +...|||+.. ..+.|++.+++.+.+.-++.+
T Consensus 356 ~~~~~-~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 397 (420)
T 3gbx_A 356 PKSPF-VTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNIN 397 (420)
T ss_dssp SSCTT-TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred ccccC-CCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCcc
Confidence 3222 3345999985 235788888888887766543
No 57
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=80.01 E-value=9.6 Score=33.04 Aligned_cols=90 Identities=11% Similarity=0.030 Sum_probs=54.2
Q ss_pred HHHhHHHHHHHHHHHhcCCCe-eeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 73 LQATVAHKASFISLVEASPKL-TLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psL-elVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
.....++|+.|.+.+++.+++ .+..++. -+++..|++ |.+ . -..++.++|.+.+.+...|..
T Consensus 265 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~-------~~~~~~~~L~~~gi~~~~g~~ 329 (362)
T 2c0r_A 265 QQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRL-ASE-------E-------LEKEFVKASEQEGFVGLKGHR 329 (362)
T ss_dssp HHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEEC-SCH-------H-------HHHHHHHHHHHTTEESCBCCT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEc-CCc-------c-------hHHHHHHHHHHCCCeeccCCC
Confidence 344455667788888877655 6543222 225555543 322 1 123577777776766554443
Q ss_pred cCCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 150 TDGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 150 ~~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
. ..+|||++. +++.|++.|++.+.+..+
T Consensus 330 ~--~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 330 S--VGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp T--TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred C--CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3 347999987 467788888888776543
No 58
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=79.12 E-value=12 Score=32.51 Aligned_cols=85 Identities=15% Similarity=0.193 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHhc-CCCeeeecCCCCceEEE-EeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-CcceecccccC--
Q psy13413 77 VAHKASFISLVEA-SPKLTLVDMPGWAGLGG-VRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGTD-- 151 (276)
Q Consensus 77 I~lr~~F~elVe~-~psLelVe~~~waGLG~-VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~~-- 151 (276)
-+.++.|.+.+++ .|++.++.+.. |... +++-..++ . ..++.++|.+. +.....|..+.
T Consensus 300 ~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~-------~~~~~~~l~~~~gi~v~~g~~~~~~ 363 (391)
T 4dq6_A 300 ESNIDFAIKYINENMPKLKVRKPEG--TYLLWVDFSALGL-------S-------DEELESILVQKGKVALNQGNSFGIG 363 (391)
T ss_dssp HHHHHHHHHHHHHHCTTSEECCCSB--SSEEEEECGGGCC-------C-------HHHHHHHHHHTTCEECEEGGGGCTT
T ss_pred HHHHHHHHHHHHhhCCCCEecCCCc--cEEEEEEhhhcCC-------C-------HHHHHHHHHHhCCEEeeCchhhCCC
Confidence 3456777777877 58888775443 3333 44422120 0 12467777665 77776665543
Q ss_pred CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
+..++|++..+++.||+++++.+.+.
T Consensus 364 ~~~~iRis~~~~~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 364 GSGYQRINLACPRSMLEEALIRIKNA 389 (391)
T ss_dssp CTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 46899999998888888888877643
No 59
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=79.05 E-value=3.1 Score=38.03 Aligned_cols=88 Identities=11% Similarity=0.139 Sum_probs=57.5
Q ss_pred HHHhHHHHHHHHHHHhcC----------CCeeeecCCC---CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc
Q psy13413 73 LQATVAHKASFISLVEAS----------PKLTLVDMPG---WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT 139 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~----------psLelVe~~~---waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe 139 (276)
.....++++.|.+.+++. ++++++.+.+ -.+...|++. .. ..++.++|.+
T Consensus 358 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~-~~----------------~~~l~~~L~~ 420 (465)
T 3e9k_A 358 RKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFS-VP----------------NKDVFQELEK 420 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEEC-CT----------------TCCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEec-CC----------------HHHHHHHHHH
Confidence 344556777888888875 8899887653 2356677663 11 1246677777
Q ss_pred CCcceecccccCCceeEEEEec---CCcccHHHHHHHHHHHhHhH
Q psy13413 140 SDAAFSLGEGTDGLACVRFGMV---TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 140 sd~aFssG~~~~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrEI 181 (276)
.+.... ..+..+|||+.+ +++.||+++++.+.+.-++.
T Consensus 421 ~Gi~v~----~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 421 RGVVCD----KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp TTEECE----EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred CCEEEe----cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 665554 334579999863 77889999998888765543
No 60
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=78.71 E-value=7.5 Score=34.87 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceeccccc--CCce
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGT--DGLA 154 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~--~G~~ 154 (276)
+.++.|.+.+++.|++.++.+..- =++.+.+...++. ..++.++|. +.+.....|..+ .|..
T Consensus 331 ~~~~~l~~~L~~~~~i~~~~~~~~-~~~~v~~~~~~~~--------------~~~l~~~l~~~~gi~v~~g~~f~~~~~~ 395 (421)
T 3l8a_A 331 GNIKLVIKELEAKTKIKVMEPEGT-YLVWLDFSAYAIA--------------QPQLSEKLQNEAKVVLNDGAHFGKEGKY 395 (421)
T ss_dssp HHHHHHHHHHHHHCSCEEECCSBS-SEEEEECGGGTCC--------------TTHHHHHHHHTTCEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHhCCCceEeCCCee-EEEEEeccccCCC--------------HHHHHHHHHHhCCEEEECchhhCCCCCC
Confidence 356677777877788888765432 2232544322211 124666774 456666666544 3468
Q ss_pred eEEEEecCCcccHHHHHHHHHHH
Q psy13413 155 CVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 155 CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
+|||+..+++.+|+++++.+.+.
T Consensus 396 ~iRi~~~~~~~~i~~~l~~l~~~ 418 (421)
T 3l8a_A 396 FARLNVATPKNTVQEALSRIISV 418 (421)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHH
Confidence 99999998888888888887654
No 61
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=78.14 E-value=18 Score=33.92 Aligned_cols=47 Identities=19% Similarity=0.214 Sum_probs=35.9
Q ss_pred HHHhcCCcceeccccc---CCceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 135 RTLRTSDAAFSLGEGT---DGLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 135 ~kLqesd~aFssG~~~---~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
+.|++.+..+..|..+ .|..++|+++..++.+++++++.+.+..+++
T Consensus 445 ~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~ 494 (500)
T 3tcm_A 445 RLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAF 494 (500)
T ss_dssp HHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 4556666666666554 4578999999988899999999998876654
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=78.12 E-value=18 Score=30.99 Aligned_cols=84 Identities=14% Similarity=0.123 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhcCCCee-eecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCC--c
Q psy13413 77 VAHKASFISLVEASPKLT-LVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDG--L 153 (276)
Q Consensus 77 I~lr~~F~elVe~~psLe-lVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G--~ 153 (276)
-+.++.|.+.+++.|++. +....+ +...+++ |.. + ..++.++|.+.+..+..|..+.+ .
T Consensus 273 ~~~~~~l~~~l~~~~~~~~~~~~~~--~~~~~~~-~~~----~-----------~~~l~~~l~~~gi~v~~g~~~~~~~~ 334 (361)
T 3ftb_A 273 KKERKRFIEELNKIGFIKRVFSPHA--NFVLCRL-ENI----S-----------GEKLYDSLLKEDIVIRRCCNFIGLDD 334 (361)
T ss_dssp HHHHHHHHHHHHHSSSEEEEECCSS--SEEEEEE-SSS----C-----------HHHHHHHHHTTTEECEECTTSTTCCT
T ss_pred HHHHHHHHHHHHhCCCCceecCCCC--eEEEEEc-CCC----C-----------HHHHHHHHHHCCeEEeeCccCCCCCC
Confidence 456677888888888888 554432 3444544 221 0 12567778776777776765533 6
Q ss_pred eeEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 154 ACVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
.+||++.. .+.|+++|++.+.+..+
T Consensus 335 ~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 335 SFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp TEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 89999976 55577788777766544
No 63
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=77.59 E-value=10 Score=33.38 Aligned_cols=90 Identities=9% Similarity=0.044 Sum_probs=56.2
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC-
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD- 151 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~- 151 (276)
.....+.++.|.+.+++. ++.++.+. ..+..+++ |.+ . -..++.++|.+.+.....|..+.
T Consensus 297 ~~~~~~~~~~l~~~L~~~-g~~~~~~~--g~~~~~~~-~~~-------~-------~~~~l~~~l~~~gi~v~~~~~~~~ 358 (398)
T 3a2b_A 297 IEKLWKNTDYAKAQLLDH-GFDLGATE--SPILPIFI-RSN-------E-------KTFWVTKMLQDDGVFVNPVVSPAV 358 (398)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBCSCC--SSEEEEEC-CCH-------H-------HHHHHHHHHHHTTEECEEECTTTS
T ss_pred HHHHHHHHHHHHHHHHhc-CCCcCCCC--CCEEEEEc-CCH-------H-------HHHHHHHHHHHCCcEEEeeCCCCC
Confidence 333445667777777776 67766443 23334433 321 1 12457777766666666554432
Q ss_pred --CceeEEEEecC--CcccHHHHHHHHHHHhHh
Q psy13413 152 --GLACVRFGMVT--AETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 --G~~CVRfGMvT--~d~DV~ELVd~I~~~GrE 180 (276)
+..+||++... ++.|++++++.+.+.-++
T Consensus 359 ~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 359 PAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQ 391 (398)
T ss_dssp CGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999994 888999999988776544
No 64
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=76.93 E-value=16 Score=31.39 Aligned_cols=91 Identities=8% Similarity=0.021 Sum_probs=59.2
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecccc
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEG 149 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~ 149 (276)
..+....+.|+.|.+.+++.|++.+.+.. ++...++. |.. + -.++.++|.+ .+.....|..
T Consensus 248 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~-~~~----~-----------~~~l~~~L~~~~gi~v~~g~~ 309 (350)
T 3fkd_A 248 LPIRKWQRNTVDFITALNRLDGVEVHPSG--TTFFLLRL-KKG----T-----------AAELKKYMLEEYNMLIRDASN 309 (350)
T ss_dssp CCHHHHHHHHHHHHHHHHHSTTEEECCCS--SSEEEEEE-SSS----C-----------HHHHHHHHHHTTCEECEECTT
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEECCCC--CcEEEEEC-CCC----C-----------HHHHHHHHHHHCCEEEEeCcc
Confidence 33444457888999989888999875432 23333433 321 0 1356777877 7777777765
Q ss_pred cCC--ceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 150 TDG--LACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 150 ~~G--~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
+.+ ..|||+++. .+.|+++|++.+.+..++
T Consensus 310 f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~ 341 (350)
T 3fkd_A 310 FRGLDESYVRITTQ-RPAQNQLFIKALETFLEK 341 (350)
T ss_dssp STTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHH
Confidence 544 689999976 566788888877766554
No 65
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=76.45 E-value=8.6 Score=33.46 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=54.2
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc---c
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG---T 150 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~---~ 150 (276)
....+.++.|.+.+++. +++++. +-.++..++. |.. . -..++.++|.+.+..+..+.. .
T Consensus 302 ~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~-~~~----------~----~~~~~~~~l~~~gi~v~~~~~~~~~ 363 (399)
T 3tqx_A 302 KQLQENSRYFRAGMEKL-GFQLVP--GNHPIIPVML-GDA----------Q----LATNMADHLLQEGIYVVGFSYPVVP 363 (399)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCBCC--CSSSEEEEEE-ECH----------H----HHHHHHHHHHHTTEECCEECTTTSC
T ss_pred HHHHHHHHHHHHHHHHc-CCCcCC--CCCCEEEEEe-CCH----------H----HHHHHHHHHHHCCCEEeeeCCCCCC
Confidence 34445566777777665 566552 2334544543 221 1 124567777765555443322 3
Q ss_pred CCceeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 151 DGLACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 151 ~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
.|..+|||+.- .++.|++++++.+.+.-++
T Consensus 364 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 395 (399)
T 3tqx_A 364 MGKARIRVQMSAVHTQQQLDRAIEAFGQVGKK 395 (399)
T ss_dssp TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeecCCCHHHHHHHHHHHHHHHHH
Confidence 45689999985 7888999999988877554
No 66
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=75.76 E-value=11 Score=31.98 Aligned_cols=92 Identities=16% Similarity=0.138 Sum_probs=56.3
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCC--CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMP--GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT 150 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~--~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~ 150 (276)
.....+.++.|.+.+++. +++++.+. .-..+..|++ |.. .. .. ..++.++|.+.+.....|...
T Consensus 268 ~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~~----~~-------~~~~~~~l~~~gi~v~~~~~~ 333 (366)
T 1m32_A 268 HQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYS-PED-PQ----YR-------FSEFYRRLKEQGFVIYPGKVS 333 (366)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEEC-CCC-TT----CC-------HHHHHHHHHHTTEECEECCCS
T ss_pred HHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEc-Ccc-CC----CC-------HHHHHHHHHHCCEEEECCcCC
Confidence 444456677888888876 67765432 2222667765 321 00 00 134667776666655544433
Q ss_pred CCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 151 DGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 151 ~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
+..+||+++- +++.|++++++.+.+.-+
T Consensus 334 -~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 334 -QSDCFRIGNIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp -SSCEEEEECCSSCCHHHHHHHHHHHHHHCT
T ss_pred -CCCEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 5678999987 567899999988876644
No 67
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=75.50 E-value=11 Score=32.43 Aligned_cols=79 Identities=8% Similarity=0.012 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCCceeE
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLACV 156 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G~~CV 156 (276)
-+.++.|.+.+++. ++.++...+ ....+++ |.. ..++.+.|.+.+.... |....+..+|
T Consensus 270 ~~~~~~l~~~l~~~-~~~~~~~~~--~~~~~~~-~~~----------------~~~~~~~l~~~gi~v~-g~~~~~~~~i 328 (354)
T 3ly1_A 270 DVSRQILLKALEDL-KLPYLPSEG--NFVFHQL-VVP----------------LKDYQTHMADAGVLIG-RAFPPADNWC 328 (354)
T ss_dssp HHHHHHHHHHHHHH-TCCBCCCCS--SEEEEEC-SSC----------------HHHHHHHHHHTTEECC-CCCTTCTTEE
T ss_pred HHHHHHHHHHHHHC-CCeECCCCc--eEEEEEC-CCC----------------HHHHHHHHHHCCEEEe-ecCCCCCCEE
Confidence 34566677777766 666653322 2333332 110 1346667776666655 6555567899
Q ss_pred EEEecCCcccHHHHHHHHHHH
Q psy13413 157 RFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 157 RfGMvT~d~DV~ELVd~I~~~ 177 (276)
|+++. .+.|++++++.+.+.
T Consensus 329 Ris~~-~~~~i~~~~~~l~~~ 348 (354)
T 3ly1_A 329 RISLG-TPQEMQWVADTMREF 348 (354)
T ss_dssp EEECC-CHHHHHHHHHHHHHH
T ss_pred EEEcC-CHHHHHHHHHHHHHH
Confidence 99976 466788777777654
No 68
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=73.78 E-value=34 Score=30.33 Aligned_cols=87 Identities=8% Similarity=-0.005 Sum_probs=52.9
Q ss_pred hHHHHHHHHHHHhcCCCeeee------cCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 76 TVAHKASFISLVEASPKLTLV------DMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelV------e~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
..+.++.|.+.+++. ++.++ .++.-.-...+++ | ++. -.++.++|.+.+.....|..
T Consensus 340 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~--------------~~~l~~~L~~~gi~v~~~~~ 402 (437)
T 3g0t_A 340 YGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGY-K-GMD--------------SSKLIEKFVRYGMCAITLKT 402 (437)
T ss_dssp HHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEE-T-TCC--------------HHHHHHHHHHTTEECEESTT
T ss_pred HHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEec-C-CCC--------------HHHHHHHHHHcCeEEeeccc
Confidence 344566777778777 78876 2312222334443 2 210 12466777766666665554
Q ss_pred cCC--ceeEEEEecC-CcccHHHHHHHHHHHhH
Q psy13413 150 TDG--LACVRFGMVT-AETDITELLSLVEETGQ 179 (276)
Q Consensus 150 ~~G--~~CVRfGMvT-~d~DV~ELVd~I~~~Gr 179 (276)
... ..|||+++.. ++.|++++++.+.+..+
T Consensus 403 ~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 403 TGSKRNEAMRICTSLLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp TTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 332 2789999885 78899999988876543
No 69
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=73.66 E-value=14 Score=31.91 Aligned_cols=86 Identities=9% Similarity=0.073 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHhc-CCCeeeecCCCCceEE-EEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecccccC-
Q psy13413 76 TVAHKASFISLVEA-SPKLTLVDMPGWAGLG-GVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEGTD- 151 (276)
Q Consensus 76 TI~lr~~F~elVe~-~psLelVe~~~waGLG-~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~~~- 151 (276)
.-+.++.|.+.+++ .|++.++.+.. |.. .+++-..++. .+++++|.+ .+..+..|..+.
T Consensus 283 ~~~~~~~l~~~L~~~~~~~~~~~~~~--~~~~~~~~~~~~~~---------------~~~~~~l~~~~gi~v~~g~~~~~ 345 (377)
T 3fdb_A 283 LKNNHDFLLHEIPKRIPGAKITPMQA--TYLMWIDFRDTTIE---------------GSPSEFFIEKAKVAMNDGAWFGE 345 (377)
T ss_dssp HHHHHHHHHHHHHHHSTTCEECCCSB--CSEEEEECTTSCCC---------------SCHHHHHHHHHCEECEEGGGGCG
T ss_pred HHHHHHHHHHHHHhhCCCceEecCCe--eEEEEEECcccCCC---------------HHHHHHHHHhCCEEecCChhccC
Confidence 34556677777877 78888775443 333 3444222211 124444433 366665554433
Q ss_pred -CceeEEEEecCCcccHHHHHHHHHHHh
Q psy13413 152 -GLACVRFGMVTAETDITELLSLVEETG 178 (276)
Q Consensus 152 -G~~CVRfGMvT~d~DV~ELVd~I~~~G 178 (276)
+..+||+++.+++.+++++++.+.+.-
T Consensus 346 ~~~~~~Ris~~~~~e~i~~~l~~l~~~l 373 (377)
T 3fdb_A 346 DGTGFCRLNFATSREVLEEAIDRMAKAV 373 (377)
T ss_dssp GGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHH
Confidence 468999999987778888888776553
No 70
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=73.43 E-value=19 Score=31.52 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=50.3
Q ss_pred HHHHHHHHHHhc-CCCeeeecCCCCceEE-EEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--C
Q psy13413 78 AHKASFISLVEA-SPKLTLVDMPGWAGLG-GVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD--G 152 (276)
Q Consensus 78 ~lr~~F~elVe~-~psLelVe~~~waGLG-~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~--G 152 (276)
+.++.|.+.+++ .|++.++.+. +|.- .+++ |.. ..+ ..++.++|. +.+..+..|..+. +
T Consensus 297 ~~~~~l~~~L~~~~~~~~~~~~~--~~~~~~~~~-~~~--~~~-----------~~~l~~~l~~~~gi~v~~g~~f~~~~ 360 (390)
T 1d2f_A 297 DNLTYIADKMNAAFPELNWQIPQ--STYLAWLDL-RPL--NID-----------DNALQKALIEQEKVAIMPGYTYGEEG 360 (390)
T ss_dssp HHHHHHHHHHHHHCSSCCCCCCS--BCSEEEEEC-GGG--CCC-----------HHHHHHHHHHTTCEECEEGGGGCGGG
T ss_pred HHHHHHHHHHHhhCCCCEEecCC--ccEEEEEEc-ccc--CCC-----------HHHHHHHHHHHcCEEeeCccccCCCC
Confidence 345667777877 6787766443 2333 2443 221 000 135677776 5677776665443 4
Q ss_pred ceeEEEEecCCcccHHHHHHHHHHHh
Q psy13413 153 LACVRFGMVTAETDITELLSLVEETG 178 (276)
Q Consensus 153 ~~CVRfGMvT~d~DV~ELVd~I~~~G 178 (276)
..+||++....+.++.++++.+.+.-
T Consensus 361 ~~~~Ris~~~~~~~l~~~l~~l~~~l 386 (390)
T 1d2f_A 361 RGFVRLNAGCPRSKLEKGVAGLINAI 386 (390)
T ss_dssp TTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 57999999987666666666665543
No 71
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=73.01 E-value=15 Score=31.79 Aligned_cols=82 Identities=12% Similarity=0.106 Sum_probs=53.4
Q ss_pred HhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC--C
Q psy13413 75 ATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD--G 152 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~--G 152 (276)
..-+.++.|.+.+++.|++++..... ....+++ | . ..++.+.|.+.+..+..|..+. +
T Consensus 281 ~~~~~~~~l~~~l~~~~g~~~~~~~~--~~~~~~~-~-~----------------~~~l~~~l~~~gi~v~~~~~~~~~~ 340 (367)
T 3euc_A 281 QLRAERSRVAEGMAAHGGVTVFPSAA--NFLLARV-P-D----------------AAQTFDRLLARKVLIKNVSKMHPLL 340 (367)
T ss_dssp HHHHHHHHHHHHHHTSTTCEECCCSS--SEEEEEC-S-C----------------HHHHHHHHHTTTEECEECGGGCGGG
T ss_pred HHHHHHHHHHHHHHhCCCcEECCCCC--eEEEEEC-C-C----------------HHHHHHHHHHCCeEEEECCccCCCC
Confidence 33456777888888888888543322 2333433 2 1 1356777877777777665532 3
Q ss_pred ceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 153 LACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 153 ~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
..+||+++. .+.|++++++.+.+.
T Consensus 341 ~~~iRis~~-~~~~i~~~~~~l~~~ 364 (367)
T 3euc_A 341 ANCLRVTVS-TPEENAQFLEAFAAS 364 (367)
T ss_dssp TTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred CCEEEEecC-CHHHHHHHHHHHHHH
Confidence 589999976 677888888877654
No 72
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=72.97 E-value=32 Score=30.16 Aligned_cols=87 Identities=14% Similarity=0.164 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhc-CC-CeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC----
Q psy13413 78 AHKASFISLVEA-SP-KLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD---- 151 (276)
Q Consensus 78 ~lr~~F~elVe~-~p-sLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~---- 151 (276)
+.++.|.+.+++ .| +++++.+.. .-...+++ |.++ + ..++.++|.+.+..+..|..+.
T Consensus 299 ~~~~~l~~~L~~~~~~g~~~~~~~~-g~~~~~~~-~~~~---~-----------~~~~~~~l~~~gi~v~~g~~f~~~~~ 362 (397)
T 2zyj_A 299 EKAQAMLHALDREVPKEVRYTRPKG-GMFVWMEL-PKGL---S-----------AEGLFRRALEENVAFVPGGPFFANGG 362 (397)
T ss_dssp HHHHHHHHHHHHHSCTTSEECCCSB-SSEEEEEC-STTC---C-----------HHHHHHHHHHTTEEEEESGGGCTTSC
T ss_pred HHHHHHHHHHHHHCCCCeEEccCCc-cEEEEEEc-CCCC---C-----------HHHHHHHHHHCCCEEechHHhcCCCC
Confidence 345567777766 46 587654321 12334443 3321 0 1356677766677766665442
Q ss_pred CceeEEEEecC-CcccHHHHHHHHHHHhHh
Q psy13413 152 GLACVRFGMVT-AETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 G~~CVRfGMvT-~d~DV~ELVd~I~~~GrE 180 (276)
+..+|||+... ++.|++++++.+.+.-++
T Consensus 363 ~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 363 GENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp CTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 46899999886 467888888888766544
No 73
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=72.94 E-value=25 Score=30.76 Aligned_cols=91 Identities=19% Similarity=0.120 Sum_probs=56.9
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc-
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT- 150 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~- 150 (276)
+.....+.++.|.+.+++. ++.+++ +-..+..+++ |.. . -..++.++|.+.+.....|...
T Consensus 301 ~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~-~~~-------~-------~~~~l~~~l~~~gi~v~~~~~~~ 362 (401)
T 1fc4_A 301 LRDRLWANARQFREQMSAA-GFTLAG--ADHAIIPVML-GDA-------V-------VAQKFARELQKEGIYVTGFFYPV 362 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCC--SSSSEEEEEE-ECH-------H-------HHHHHHHHHHHTTEECCEECTTS
T ss_pred HHHHHHHHHHHHHHHHHHc-CCcccC--CCCCEEEEEc-CCh-------H-------HHHHHHHHHHHCCcEEeeecCCC
Confidence 3444556677888888876 677652 2335555654 211 1 1235667776666555544322
Q ss_pred --CCceeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 151 --DGLACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 151 --~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
.+..+||+++- .++.|++++++.+.+.-++
T Consensus 363 ~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 396 (401)
T 1fc4_A 363 VPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQ 396 (401)
T ss_dssp SCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 24679999987 6888999999988776544
No 74
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=72.73 E-value=24 Score=32.35 Aligned_cols=89 Identities=10% Similarity=0.025 Sum_probs=56.8
Q ss_pred HhHHHHHHHHHHHhcCCCe-eee-cCC-CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 75 ATVAHKASFISLVEASPKL-TLV-DMP-GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psL-elV-e~~-~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
...++++.|.+.+++.+++ +.. ++. .-+++.+|++ |.. ..+ +.++++.|.+.+.+...|...
T Consensus 265 ~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~-~~~----------~~~---~~~~~~~L~~~gI~~~~g~~~- 329 (361)
T 3m5u_A 265 KNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNI-AKN----------KDL---EPLFVKEAEEAGMIGLKGHRI- 329 (361)
T ss_dssp HHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEE-SSC----------TTH---HHHHHHHHHHTTEECCBCCTT-
T ss_pred HHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEEC-CCc----------hhh---hHHHHHHHHHCCCEEecCCCc-
Confidence 3456888899999988866 543 221 2246788875 321 011 124566676666665554332
Q ss_pred CceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 152 GLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 152 G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
..++|++.- ++..||+.|++.+.+..+
T Consensus 330 -~g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 330 -LGGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp -TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -cCeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 346999987 678899999988877654
No 75
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=71.20 E-value=5.2 Score=35.13 Aligned_cols=88 Identities=9% Similarity=0.026 Sum_probs=56.3
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCC
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDG 152 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G 152 (276)
...-+.|+.|.+.+++. +++++.+. .|. ..++. |.. . -.++.+.|.+.+.....|..+..
T Consensus 307 ~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~-~~~--------~-------~~~~~~~l~~~gi~v~~g~~~~~ 367 (398)
T 3ele_A 307 NAYKENRDLLYEGLTRI-GYHCFKPD--GAFYMFVKA-LED--------D-------SNAFCEKAKEEDVLIVAADGFGC 367 (398)
T ss_dssp HHHHHHHHHHHHHHHHH-TCCEECCS--BSSEEEEEC-SSS--------C-------HHHHHHHHHTTTEECEESGGGTC
T ss_pred HHHHHHHHHHHHHHHHc-CCeecCCC--eeEEEEEEc-CCC--------C-------HHHHHHHHHHCCEEEeCccccCC
Confidence 33445667777777765 56665433 233 33332 211 0 12566777777877777776665
Q ss_pred ceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 153 LACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 153 ~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
..+||++..+++.||+++++.+.+.-++
T Consensus 368 ~~~iRis~~~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 368 PGWVRISYCVDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp TTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 6799999988888888888888766443
No 76
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=71.14 E-value=7.6 Score=33.07 Aligned_cols=85 Identities=11% Similarity=0.008 Sum_probs=51.3
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccccc
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGT 150 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~ 150 (276)
+.....+.++.|.+.+ +.++++++.+... ....++. | .++.++|.+. +... .+...
T Consensus 269 ~~~~~~~~~~~l~~~L-~~~~~~~~~~~~~-~~~~~~~-~-------------------~~~~~~l~~~~gi~v-~~~~~ 325 (359)
T 1svv_A 269 LGAHSNKMAAILKAGL-EACGIRLAWPSAS-NQLFPIL-E-------------------NTMIAELNNDFDMYT-VEPLK 325 (359)
T ss_dssp HHHHHHHHHHHHHHHH-HHTTCCBSSCCSS-SEECBEE-E-------------------HHHHHHHTTTEECEE-EEEET
T ss_pred HHHHHHHHHHHHHHHh-ccCCeEEccCCcc-ceEEEEc-C-------------------HHHHHHHHHhcCEEE-Eeccc
Confidence 4455567778888878 4678877644322 2222211 0 2677788665 5543 22222
Q ss_pred CCceeEEEEe--cCCcccHHHHHHHHHHHhH
Q psy13413 151 DGLACVRFGM--VTAETDITELLSLVEETGQ 179 (276)
Q Consensus 151 ~G~~CVRfGM--vT~d~DV~ELVd~I~~~Gr 179 (276)
.+..+|||++ ..++.|++++++.+.+.-+
T Consensus 326 ~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~ 356 (359)
T 1svv_A 326 DGTCIMRLCTSWATEEKECHRFVEVLKRLVA 356 (359)
T ss_dssp TTEEEEEEECCTTCCHHHHHHHHHHHHHC--
T ss_pred CCCceEEEEccCcCCHHHHHHHHHHHHHHHh
Confidence 4578999975 3688899999988876544
No 77
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=71.05 E-value=25 Score=30.83 Aligned_cols=95 Identities=17% Similarity=0.116 Sum_probs=55.0
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc---
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE--- 148 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~--- 148 (276)
......+.++.|.+.+++ .+++++.+..-..+..+.+.+..+ .. .++.+.|++.+..+..+.
T Consensus 291 ~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------~~-------~~~~~~l~~~gi~v~~~~~p~ 355 (425)
T 3ecd_A 291 YIDRVLANAQALGDVLKA-GGVDLVTGGTDNHLLLVDLRPKGL-------KG-------AQVEQALERAGITCNKNGIPF 355 (425)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGTC-------CH-------HHHHHHHHHTTEECEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHh-CCCeeccCCCCceEEEEEeCCCCC-------CH-------HHHHHHHHHcCCEecccccCC
Confidence 334455566677777776 578877654444556665544331 11 134455666565555221
Q ss_pred ---ccCCceeEEEEec--C----CcccHHHHHHHHHHHhHhH
Q psy13413 149 ---GTDGLACVRFGMV--T----AETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ---~~~G~~CVRfGMv--T----~d~DV~ELVd~I~~~GrEI 181 (276)
...+..+||+|.. + .+.|++++++.+.+.-++.
T Consensus 356 ~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 356 DPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp CSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 1123468999943 2 3678888888887766554
No 78
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=70.48 E-value=20 Score=31.13 Aligned_cols=82 Identities=17% Similarity=0.111 Sum_probs=50.9
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC--Ccee
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD--GLAC 155 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~--G~~C 155 (276)
+.|+.|.+.+++.|+++++... ++...+++ |.. ..++.++|.+.+..+..|..+. +..+
T Consensus 275 ~~~~~l~~~L~~~~~~~~~~~~--g~~~~~~~-~~~----------------~~~l~~~l~~~gi~v~~g~~~~~~~~~~ 335 (364)
T 1lc5_A 275 EEGARFYQALCQLPLLTVYPGR--ANYLLLRC-ERE----------------DIDLQRRLLTQRILIRSCANYPGLDSRY 335 (364)
T ss_dssp HHHHHHHHHHHTSTTEEECCCS--SSEEEEEE-SCT----------------TCCHHHHHHTTTEECEECTTSTTCCTTE
T ss_pred HHHHHHHHHHhcCCCCEECCCC--CeEEEEEC-CCc----------------HHHHHHHHHHCCcEEeeCcccCCCCCCE
Confidence 4466788888888888876432 23334433 211 1246677776677776666543 3579
Q ss_pred EEEEecCCcccHHHHHHHHHHHhH
Q psy13413 156 VRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 156 VRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
||++..+ +.|+++|++.+.+..+
T Consensus 336 iRis~~~-~~~~~~l~~~l~~~~~ 358 (364)
T 1lc5_A 336 YRVAIRS-AAQNERLLAALRNVLT 358 (364)
T ss_dssp EEEECCC-HHHHHHHHHHHHHHC-
T ss_pred EEEEeCC-HHHHHHHHHHHHHHhh
Confidence 9999754 6677777777765544
No 79
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=70.46 E-value=31 Score=30.98 Aligned_cols=92 Identities=10% Similarity=0.098 Sum_probs=56.8
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc--
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT-- 150 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~-- 150 (276)
.....+.++.|.+.+++. ++.++.+..-.++..|++ |.. ....++.++|.+.+..+..+..+
T Consensus 318 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~--------------~~~~~l~~~L~~~Gi~v~~~~~~~~ 381 (427)
T 2w8t_A 318 RERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVML-EDQ--------------EQAAMMWQALLDGGLYVNMARPPAT 381 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEE-SSH--------------HHHHHHHHHHHHTTEECEEECTTTS
T ss_pred HHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEE-CCH--------------HHHHHHHHHHHHCCeEEeeeCCCCC
Confidence 344455677777777765 677662221335656654 211 12345777776666555544322
Q ss_pred -CCceeEEEEecC--CcccHHHHHHHHHHHhHh
Q psy13413 151 -DGLACVRFGMVT--AETDITELLSLVEETGQQ 180 (276)
Q Consensus 151 -~G~~CVRfGMvT--~d~DV~ELVd~I~~~GrE 180 (276)
.|..+|||++-. ++.||+++++.+.+..++
T Consensus 382 ~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~ 414 (427)
T 2w8t_A 382 PAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRA 414 (427)
T ss_dssp CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999884 888999999988776543
No 80
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=70.19 E-value=19 Score=30.51 Aligned_cols=84 Identities=15% Similarity=0.116 Sum_probs=51.1
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
.+....+.|+.|.+.+++. ++.+..+. ++...++. |.. .++.+.|.+.+.....|..+.
T Consensus 250 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~-~~~-----------------~~~~~~l~~~gi~v~~g~~~~ 308 (337)
T 3p1t_A 250 HIAKTLAQRRRVADALRGL-GYRVASSE--ANFVLVEN-AAG-----------------ERTLRFLRERGIQVKDAGQFG 308 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCBCCCS--SSEEEEEC-TTT-----------------HHHHHHHHHTTEECEEGGGGT
T ss_pred HHHHHHHHHHHHHHHHHHC-cCEECCCC--CeEEEEEc-CCH-----------------HHHHHHHHHCCeEEEECccCC
Confidence 3344456677888888776 66654332 23333322 111 235566777777777776665
Q ss_pred CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
...+||+++. .+.|++.|++.+.+.
T Consensus 309 ~~~~iRis~~-~~~~~~~l~~al~~~ 333 (337)
T 3p1t_A 309 LHHHIRISIG-REEDNDRLLAALAEY 333 (337)
T ss_dssp CCSEEEEECC-CHHHHHHHHHHHHHH
T ss_pred CCCeEEEecC-CHHHHHHHHHHHHHH
Confidence 4679999987 466788877777654
No 81
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=69.90 E-value=14 Score=32.73 Aligned_cols=86 Identities=14% Similarity=0.079 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceeccccc--CCce
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGT--DGLA 154 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~--~G~~ 154 (276)
+.|+.|.+.+++. ++++..+.. +....++++|.++.. .++.++|. +.+..+..|..+ .+..
T Consensus 303 ~~~~~l~~~L~~~-g~~~~~~~~-~~~~~~~~~~~~~~~--------------~~~~~~l~~~~gv~v~~g~~f~~~~~~ 366 (400)
T 3asa_A 303 ENSDLLRKALLAT-GFEVFGGEH-APYLWVKPTQANISD--------------RDLFDFFLREYHIAITPGIGFGRSGSG 366 (400)
T ss_dssp HHHHHHHHHHHHT-TCEEEECSS-SSEEEEECCCTTCCT--------------TTHHHHHHHHHSEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHC-CCeeeCCCC-ceEEEEeccCCCCCH--------------HHHHHHHHHhCCEEEeChhHhCCCCCC
Confidence 4567777778765 677765332 123455535544211 13444453 335555544433 2467
Q ss_pred eEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 155 CVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 155 CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
+||++..+++.+++++++.+.+.-+
T Consensus 367 ~iRis~~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 367 FVRFSSLGKREDILAACERLQMAPA 391 (400)
T ss_dssp CEEEECCSCHHHHHHHHHHHHC---
T ss_pred EEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 9999976778888888887766544
No 82
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=69.67 E-value=7.5 Score=33.95 Aligned_cols=93 Identities=12% Similarity=0.142 Sum_probs=38.2
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceeccc-
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGE- 148 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~- 148 (276)
.....+.++.|.+.++ .+++++..+.. .+++..|+. | ++ + .++ +-..|.+.+.- .+..|..+.
T Consensus 286 ~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~-~-~~---~----~~~---l~~~L~~gi~v~~g~~~~~~~~ 352 (400)
T 3vax_A 286 QVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSF-E-DV---D----AEA---FLVTLKDLVAVATGSASTSASF 352 (400)
T ss_dssp HHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEEC-T-TC---C----HHH---HHHHHHHHHHHTTTTEEEEEEE
T ss_pred HHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEe-C-CC---C----HHH---HHHHHhcCcEEEecccccCCCC
Confidence 3444556778888888 88999886654 234555543 2 21 1 111 11111122222 344454431
Q ss_pred ---------ccC---CceeEEEEe-c--CCcccHHHHHHHHHHHh
Q psy13413 149 ---------GTD---GLACVRFGM-V--TAETDITELLSLVEETG 178 (276)
Q Consensus 149 ---------~~~---G~~CVRfGM-v--T~d~DV~ELVd~I~~~G 178 (276)
..+ ...+||+++ - .++.|++++++.+.+.-
T Consensus 353 ~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 397 (400)
T 3vax_A 353 TPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLK 397 (400)
T ss_dssp CCHHHHHTTTCCHHHHTSEEEEEEEEC------------------
T ss_pred CccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHh
Confidence 011 137999998 3 67788988888877653
No 83
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=69.54 E-value=20 Score=31.93 Aligned_cols=86 Identities=17% Similarity=0.260 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--Cc
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD--GL 153 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~--G~ 153 (276)
+.++.|.+.+++. +++++.+. +|+ ..+++ |.++ + . .++.++|. +.+..+..|..+. +.
T Consensus 314 ~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~-~~~~---~----~-------~~l~~~l~~~~gi~v~~g~~f~~~~~ 375 (404)
T 2o1b_A 314 TRRDRFEAMLAKA-DLPFVHAK--GGIYVWLET-PPGY---D----S-------EQFEQFLVQEKSILVAPGKPFGENGN 375 (404)
T ss_dssp HHHHHHHHHHHHT-TCCEECCC--BSSEEEEEC-CTTC---C----H-------HHHHHHHHHHHCEECEESGGGCGGGT
T ss_pred HHHHHHHHHHHhc-CCeecCCC--cceEEEEeC-CCCC---C----H-------HHHHHHHHHHCCEEEeCchhhCcCCC
Confidence 3456677777776 67765432 343 44444 3321 0 1 24555553 3455555444332 46
Q ss_pred eeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 154 ACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
.+||++...++.+++++++.+.+.-++.
T Consensus 376 ~~iRis~~~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 376 RYVRISLALDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp TEEEEECCSCTTHHHHHHHHHHGGGGGG
T ss_pred CeEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 7999999987778888888887665443
No 84
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=69.24 E-value=30 Score=30.50 Aligned_cols=48 Identities=10% Similarity=0.015 Sum_probs=33.4
Q ss_pred HHHHHH-hcCCcceeccccc-------CCceeEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTL-RTSDAAFSLGEGT-------DGLACVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kL-qesd~aFssG~~~-------~G~~CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
+++++| ++.+..+..|..+ .+..+|||++..++.||+++++.+.+.-+
T Consensus 365 ~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 365 RFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp HHHHHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 445543 4445555555443 45789999999988899999988876544
No 85
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=68.62 E-value=60 Score=28.33 Aligned_cols=94 Identities=9% Similarity=0.053 Sum_probs=54.8
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc-----
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE----- 148 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~----- 148 (276)
....+.++.|.+.+++ .++.++.......+..+.+.+.++ ... ++.+.|++.+.....+.
T Consensus 285 ~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~~l~~~gi~v~~~~~~~~~ 349 (417)
T 3n0l_A 285 KQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREF-------SGK-------DADLALGNAGITANKNTVPGEI 349 (417)
T ss_dssp HHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSS-------CHH-------HHHHHHHHTTEECEECCCTTCC
T ss_pred HHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCC-------CHH-------HHHHHHHHcCeEEeccccCCCC
Confidence 3445566778888877 778877644444566666655441 111 34444555444333211
Q ss_pred -ccCCceeEEEEec------CCcccHHHHHHHHHHHhHhHH
Q psy13413 149 -GTDGLACVRFGMV------TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 149 -~~~G~~CVRfGMv------T~d~DV~ELVd~I~~~GrEIE 182 (276)
...+..++|+|.. ..+.||+++++.+.+.-++.+
T Consensus 350 ~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~ 390 (417)
T 3n0l_A 350 RSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDVN 390 (417)
T ss_dssp SCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred cccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhccc
Confidence 1123467999975 246788888888887766543
No 86
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=68.53 E-value=12 Score=34.70 Aligned_cols=92 Identities=10% Similarity=0.096 Sum_probs=57.8
Q ss_pred HhHHHHHHHHHHHhcCCCeeeecC-CCC--ceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 75 ATVAHKASFISLVEASPKLTLVDM-PGW--AGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelVe~-~~w--aGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
...++++.|.+.+++.|++.+... +.. +.+.+|+. |.. . . ..++ ...+++.|.+.+..-..|-..
T Consensus 277 ~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~-~~~-~---~---~~~~---~~~~l~~l~~~Gi~~~~g~~~- 344 (377)
T 3e77_A 277 LSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI-GNA-K---G---DDAL---EKRFLDKALELNMLSLKGHRS- 344 (377)
T ss_dssp HHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE-SST-T---C---CHHH---HHHHHHHHHHTTEESCBCCTT-
T ss_pred HHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc-CCC-C---C---chhH---HHHHHHHHHHCCcEEeCCCCc-
Confidence 355778889999999888885431 212 24677775 321 0 0 0223 235666666656554444332
Q ss_pred CceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 152 GLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 152 G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
..++|++.- ++..||+.|++.+.+..+
T Consensus 345 -~g~iRiS~~~~~t~edId~l~~al~~~~~ 373 (377)
T 3e77_A 345 -VGGIRASLYNAVTIEDVQKLAAFMKKFLE 373 (377)
T ss_dssp -TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 346999988 678899999998887654
No 87
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=67.71 E-value=20 Score=31.27 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=50.0
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC---
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD--- 151 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~--- 151 (276)
..+.++.|.+.+++ .+++++.+. .| ...+++ |.. + +.+.|++.+..+..|..+.
T Consensus 283 ~~~~~~~l~~~L~~-~g~~~~~~~--~~~~~~~~~-~~~------~------------~~~~l~~~gi~v~~g~~~~~~~ 340 (381)
T 1v2d_A 283 YRRRRDLLAGGLRA-MGLRVYVPE--GTYFLMAEL-PGW------D------------AFRLVEEARVALIPASAFYLED 340 (381)
T ss_dssp HHHHHHHHHHHHHH-TTCCEECCS--BSSEEEEEC-TTC------C------------HHHHHHHTCEECEEGGGGCSSS
T ss_pred HHHHHHHHHHHHHH-CCCEecCCC--cceEEEEec-ChH------h------------HHHHHHhCCEEEecchHhCCCC
Confidence 34566777787877 578777543 23 233332 221 0 3344556666665554432
Q ss_pred -CceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 152 -GLACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 -G~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
+..+|||+...++.|++++++.+.+.-++
T Consensus 341 ~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 341 PPKDLFRFAFCKTEEELHLALERLGRVVNS 370 (381)
T ss_dssp CCTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 46799999988777888888888766443
No 88
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=66.39 E-value=22 Score=31.42 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=53.2
Q ss_pred HhHHHHHHHHHHHhcCCCeeeecCCC--CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc---
Q psy13413 75 ATVAHKASFISLVEASPKLTLVDMPG--WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG--- 149 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelVe~~~--waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~--- 149 (276)
...++++.|.+.+++. +++++.+.. .+.+.++. ++. . +. ...++|++.+...+.|..
T Consensus 279 ~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~--~~~-------~---~~-----~~~~~L~~~Gi~v~~g~~~~~ 340 (379)
T 3ke3_A 279 AQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSY--TER-------D---DM-----HKGSAFAEAGLQIAAGVPLKV 340 (379)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEE--CSC-------H---HH-----HSSHHHHHTTCCCEECCCCSS
T ss_pred HHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEc--cCC-------c---ch-----HHHHHHHHCCeEEeCCccccc
Confidence 3356777888888765 677665443 22343332 222 1 11 113445555665555432
Q ss_pred --cCCceeEEEEec--CCcccHHHHHHHHHHHhHhHH
Q psy13413 150 --TDGLACVRFGMV--TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 150 --~~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIE 182 (276)
..+..+|||+.. .++.||+.+++.+.+..+++.
T Consensus 341 ~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 341 GEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp CCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 122578999975 678899999999987766553
No 89
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=66.36 E-value=27 Score=29.82 Aligned_cols=88 Identities=8% Similarity=-0.040 Sum_probs=51.8
Q ss_pred HHHhHHHHHHHHHHHhcCCCe-eee-cCCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccc
Q psy13413 73 LQATVAHKASFISLVEASPKL-TLV-DMPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEG 149 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psL-elV-e~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~ 149 (276)
.....+.++.+.+.+++.+++ ... ++..-.+ +..|++ |.. .. -.+++++|.+.+.....|..
T Consensus 264 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~----~~~~~~~l~~~gi~~~~~~~ 328 (360)
T 1w23_A 264 AKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNL-RNE----------EL----NQQFLAKAKEQGFVGLNGHR 328 (360)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEEC-SSH----------HH----HHHHHHHHHHTTEESCBCCT
T ss_pred HHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEc-CCC----------cc----HHHHHHHHHHCCeeeecCCC
Confidence 334456677788888877765 433 1211123 666653 221 11 23566677776666554433
Q ss_pred cCCceeEEEEec--CCcccHHHHHHHHHHH
Q psy13413 150 TDGLACVRFGMV--TAETDITELLSLVEET 177 (276)
Q Consensus 150 ~~G~~CVRfGMv--T~d~DV~ELVd~I~~~ 177 (276)
. ..+||++.. +++.|++.+++.+.+.
T Consensus 329 ~--~~~iRis~~~~~~~~~i~~~~~~l~~~ 356 (360)
T 1w23_A 329 S--VGGCRASIYNAVPIDACIALRELMIQF 356 (360)
T ss_dssp T--TCSEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred C--CCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 2 468999987 5677888888877654
No 90
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=66.34 E-value=33 Score=30.72 Aligned_cols=91 Identities=11% Similarity=0.109 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcCCCeeeecCCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-Ccceeccccc--CCce
Q psy13413 79 HKASFISLVEASPKLTLVDMPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGT--DGLA 154 (276)
Q Consensus 79 lr~~F~elVe~~psLelVe~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~--~G~~ 154 (276)
.++.|.+.+++. ++.++... +| ...++ +|..+... ... -..++.++|.+. +.....|..+ .+..
T Consensus 337 ~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~-l~~~~~~~-~~~-------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 404 (435)
T 3piu_A 337 RQKKLVSGLQKS-GISCLNGN--AGLFCWVD-MRHLLRSN-TFE-------AEMELWKKIVYEVHLNISPGSSCHCTEPG 404 (435)
T ss_dssp HHHHHHHHHHTT-TCEECCCC--SSSEEEEE-CGGGSSSS-SHH-------HHHHHHHHHHHTSCEECEEGGGGTCSSTT
T ss_pred HHHHHHHHHHhc-CCcccCCC--eeEEEEEE-cccccccC-Cch-------hHHHHHHHHHHHCCEEEeCCcccCCCCCC
Confidence 445666777755 67765433 23 22233 23321111 100 124577777554 7766665544 4578
Q ss_pred eEEEEecC-CcccHHHHHHHHHHHhHhH
Q psy13413 155 CVRFGMVT-AETDITELLSLVEETGQQE 181 (276)
Q Consensus 155 CVRfGMvT-~d~DV~ELVd~I~~~GrEI 181 (276)
++||++.. ++.||+++++.+.+.-+++
T Consensus 405 ~iRi~~~~~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 405 WFRVCFANLPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp EEEEECSSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHH
Confidence 99999976 7888999998887765543
No 91
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=65.70 E-value=8 Score=34.08 Aligned_cols=50 Identities=14% Similarity=0.197 Sum_probs=35.4
Q ss_pred HHHHHHhcCCcceecccccC---------CceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTD---------GLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~---------G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
++.++|.+.+..+..|..+. +..+|||+...++.||+++++.+.+.-+++
T Consensus 355 ~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~~ 413 (417)
T 3g7q_A 355 LLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVPEPDKIEAGVKILAEEIERA 413 (417)
T ss_dssp HHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 46667766666666554331 157999999987788999988887766544
No 92
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=64.86 E-value=66 Score=28.55 Aligned_cols=81 Identities=10% Similarity=0.082 Sum_probs=51.1
Q ss_pred HHHHHHHHHHhc---CCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceecccccCC
Q psy13413 78 AHKASFISLVEA---SPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEGTDG 152 (276)
Q Consensus 78 ~lr~~F~elVe~---~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~~~G 152 (276)
+.++.|.+.+++ ..+++++.+. +|. ..+++ | ++. ..++.++|.+ .+..+..| +
T Consensus 342 ~~~~~l~~~L~~~~~~~g~~~~~~~--~g~~~~~~~-~-~~~--------------~~~~~~~l~~~~gi~v~~g----~ 399 (430)
T 2x5f_A 342 ERYEVTKEVVYADQYHSHWQAYDFN--SGYFMAIKV-H-DVD--------------PEALRKHLIDKYSIGVIAL----N 399 (430)
T ss_dssp HHHHHHHHHHTCGGGTTTEEECCCC--BSSEEEEEE-S-SSC--------------HHHHHHHHHHHHCEECEEC----S
T ss_pred HHHHHHHHHHHhhCCCCCceeeCCC--ceEEEEeCC-C-CCC--------------HHHHHHHHHHhCCEEEecC----C
Confidence 345566666763 2267765432 344 44444 3 311 1256777766 67777655 5
Q ss_pred ceeEEEEec-CCcccHHHHHHHHHHHhHh
Q psy13413 153 LACVRFGMV-TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 153 ~~CVRfGMv-T~d~DV~ELVd~I~~~GrE 180 (276)
..++|++.. .++.|++++++.+.+.-++
T Consensus 400 ~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 400 ATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp SSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 579999998 8888899999998776543
No 93
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=64.16 E-value=35 Score=29.39 Aligned_cols=79 Identities=5% Similarity=0.100 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCCceeE
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLACV 156 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G~~CV 156 (276)
-+.++.|.+.+++. ++++....+ +...+++ |.. . ..++.++|.+.+.....|..+. ..+|
T Consensus 284 ~~~~~~l~~~l~~~-g~~~~~~~~--~~~~~~~-~~~--------~-------~~~~~~~l~~~gi~v~~g~~~~-~~~i 343 (365)
T 3get_A 284 FSQMELYKEFAKKH-NIKIIDSYT--NFITYFF-DEK--------N-------STDLSEKLLKKGIIIRNLKSYG-LNAI 343 (365)
T ss_dssp HHHHHHHHHHHHHT-TCEECCCSS--SEEEEEC-SSS--------C-------HHHHHHHHHTTTEECEECGGGT-CSEE
T ss_pred HHHHHHHHHHHHhC-CCEECCCCC--eEEEEEC-CCC--------C-------HHHHHHHHHHCCEEEEECccCC-CCEE
Confidence 34567777778777 777654332 3333332 221 0 1246677777677776666554 7899
Q ss_pred EEEecCCcccHHHHHHHHHH
Q psy13413 157 RFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 157 RfGMvT~d~DV~ELVd~I~~ 176 (276)
|+++. .+.|++++++.+.+
T Consensus 344 Ris~~-~~~~i~~l~~~l~~ 362 (365)
T 3get_A 344 RITIG-TSYENEKFFTEFDK 362 (365)
T ss_dssp EEECC-CHHHHHHHHHHHHH
T ss_pred EEEcC-CHHHHHHHHHHHHH
Confidence 99976 56788888877754
No 94
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=63.79 E-value=36 Score=31.44 Aligned_cols=89 Identities=6% Similarity=-0.030 Sum_probs=53.8
Q ss_pred HhHHHHHHHHHHHhcCCCeeee-cC-CCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCC
Q psy13413 75 ATVAHKASFISLVEASPKLTLV-DM-PGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDG 152 (276)
Q Consensus 75 ~TI~lr~~F~elVe~~psLelV-e~-~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G 152 (276)
...++++.|.+.+++.+-+... ++ ..-+++.+|++-.++ +..+++++|.+.+.+-..|...
T Consensus 292 ~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~---------------~~~~~~~~L~~~gI~~~~g~~~-- 354 (386)
T 3qm2_A 292 INQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNT---------------LDKVFLEESFAAGLHALKGHRV-- 354 (386)
T ss_dssp HHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGG---------------GHHHHHHHHHHTTEECCBCCTT--
T ss_pred HHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCcc---------------ccHHHHHHHHHCCCEEeCCCCC--
Confidence 3456778888888876322322 22 122368888763212 1124555666666555444332
Q ss_pred ceeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 153 LACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 153 ~~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
..+||+++- +++.||+.|++.+.+..++
T Consensus 355 ~~~iRiS~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 355 VGGMRASIYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 235999987 6788999999998877553
No 95
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=63.53 E-value=28 Score=30.52 Aligned_cols=86 Identities=22% Similarity=0.256 Sum_probs=55.6
Q ss_pred HHHHhHHHHHHHHHHHhcC-C--CeeeecCCC---CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee
Q psy13413 72 ILQATVAHKASFISLVEAS-P--KLTLVDMPG---WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS 145 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~-p--sLelVe~~~---waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs 145 (276)
+.....+.++.|.+.+++. | +++++.+.. -.++..|++ |. ..++.++|.+.+....
T Consensus 306 ~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~l~~~l~~~gi~~~ 367 (416)
T 1qz9_A 306 LRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEH-PE-----------------GYAVIQALIDRGVIGD 367 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEEC-TT-----------------HHHHHHHHHTTTEECE
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEec-CC-----------------HHHHHHHHHhCCcEec
Confidence 3445566778888888775 6 788876542 235666654 11 2356777766554321
Q ss_pred cccccCCceeEEEEec---CCcccHHHHHHHHHHHhH
Q psy13413 146 LGEGTDGLACVRFGMV---TAETDITELLSLVEETGQ 179 (276)
Q Consensus 146 sG~~~~G~~CVRfGMv---T~d~DV~ELVd~I~~~Gr 179 (276)
..+..+||+++. +++.|++++++.+.+.-+
T Consensus 368 ----~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~ 400 (416)
T 1qz9_A 368 ----YREPRIMRFGFTPLYTTFTEVWDAVQILGEILD 400 (416)
T ss_dssp ----EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred ----cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHh
Confidence 235678999975 588899999888876644
No 96
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=63.11 E-value=49 Score=28.53 Aligned_cols=81 Identities=10% Similarity=0.056 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCCceeE
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLACV 156 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G~~CV 156 (276)
-+.++.|.+.+++. ++.+..... +...++. | + ... .++.++|.+.+.....+....+..+|
T Consensus 271 ~~~~~~l~~~L~~~-~~~~~~~~~--~~~~~~~-~-~-------~~~-------~~l~~~l~~~gi~v~~~~~~~~~~~i 331 (360)
T 3hdo_A 271 RETREWFTTELRSI-GYDVIPSQG--NYLFATP-P-D-------RDG-------KRVYDGLYARKVLVRHFSDPLLAHGM 331 (360)
T ss_dssp HHHHHHHHHHHHHT-TCEECCCSS--SEEEEEC-T-T-------CCH-------HHHHHHHHHTTEECBCCCSTTTTTSE
T ss_pred HHHHHHHHHHHHHC-CCEEcCCCc--cEEEEEC-C-C-------CCH-------HHHHHHHHHCCEEEEECCCCCCCCEE
Confidence 34567777777776 777653322 2333322 2 2 001 24666777766665554444456899
Q ss_pred EEEecCCcccHHHHHHHHHHH
Q psy13413 157 RFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 157 RfGMvT~d~DV~ELVd~I~~~ 177 (276)
|+++. .+.|++.|++.+...
T Consensus 332 Ris~~-~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 332 RISIG-TREEMEQTLAALKEI 351 (360)
T ss_dssp EEECC-CHHHHHHHHHHHHHH
T ss_pred EEEcC-CHHHHHHHHHHHHHH
Confidence 99976 678888888877655
No 97
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=62.74 E-value=64 Score=28.83 Aligned_cols=47 Identities=4% Similarity=0.019 Sum_probs=31.9
Q ss_pred HHHHHhcCCcceecccccC-----CceeEEEEec-CCcccHHHHHHHHHHHhH
Q psy13413 133 VVRTLRTSDAAFSLGEGTD-----GLACVRFGMV-TAETDITELLSLVEETGQ 179 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~-----G~~CVRfGMv-T~d~DV~ELVd~I~~~Gr 179 (276)
+.+.|.+.+..+.-|..+. +..|||++.. .++.+++++++.+.+.-+
T Consensus 370 ~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~ 422 (425)
T 2r2n_A 370 IEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIK 422 (425)
T ss_dssp HHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 4455666666666555432 3579999986 677788888887766543
No 98
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=62.67 E-value=37 Score=30.12 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhcCCCeee-ecCCCCceEEE-EeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC------Ccceeccc
Q psy13413 77 VAHKASFISLVEASPKLTL-VDMPGWAGLGG-VRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS------DAAFSLGE 148 (276)
Q Consensus 77 I~lr~~F~elVe~~psLel-Ve~~~waGLG~-VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes------d~aFssG~ 148 (276)
.+.++.|.+.+++. ++++ +.+. .|.-. +++ | + .+ ..++.++|.+. +..+..|.
T Consensus 304 ~~~~~~l~~~L~~~-g~~~~~~~~--~~~~~~~~~-~-~---~~-----------~~~l~~~l~~~~~~~~~gi~v~~g~ 364 (409)
T 2gb3_A 304 RERVETVLKKLEEH-GLKRFTKPS--GAFYITAEL-P-V---ED-----------AEEFARWMLTDFNMDGETTMVAPLR 364 (409)
T ss_dssp HHHHHHHHHHHHHT-TCCCBCCCS--BSSEEEEEC-S-S---SC-----------HHHHHHHHHHSCCBTTEEEECEEGG
T ss_pred HHHHHHHHHHHHHc-CceeeeCCC--eeEEEEEEe-C-C---CC-----------HHHHHHHHHhccccccCcEEEeCch
Confidence 45566777777776 6766 4332 23322 233 3 2 00 12455566443 55555443
Q ss_pred cc-----CCceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 149 GT-----DGLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 149 ~~-----~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
.+ .+..+||++...++.||+++++.+.+.-+++
T Consensus 365 ~f~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 365 GFYLTPGLGKKEIRIACVLEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp GGCSSTTTTSSEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 33 2467999998888888999988887765543
No 99
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=61.59 E-value=29 Score=30.95 Aligned_cols=90 Identities=12% Similarity=0.105 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcC-CcceecccccCC--
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTS-DAAFSLGEGTDG-- 152 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqes-d~aFssG~~~~G-- 152 (276)
.+.++.|.+.+++. ++.++... .| ...+++ |..+.. .... --.++.++|.+. +..+..|..+.+
T Consensus 330 ~~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~-~~~~~~-~~~~-------~~~~l~~~l~~~~gi~v~~~~~~~~~~ 397 (428)
T 1iay_A 330 GKRHKHFTNGLEVV-GIKCLKNN--AGLFCWMDL-RPLLRE-STFD-------SEMSLWRVIINDVKLNVSPGSSFECQE 397 (428)
T ss_dssp HHHHHHHHHHHHHT-TCCBCCCS--SSSEEEEEC-GGGCSS-SSHH-------HHHHHHHHHHHTSCEECEEGGGGTCSS
T ss_pred HHHHHHHHHHHHhc-CCcccCCC--eeEEEEEec-hhhcCC-Cchh-------HHHHHHHHHHHhCCEEEeCchhhCCCC
Confidence 35677788878776 66655432 23 234444 222111 0000 123577777654 777666654432
Q ss_pred ceeEEEEec-CCcccHHHHHHHHHHHh
Q psy13413 153 LACVRFGMV-TAETDITELLSLVEETG 178 (276)
Q Consensus 153 ~~CVRfGMv-T~d~DV~ELVd~I~~~G 178 (276)
..+||++.. .++.|++++++.+.+.-
T Consensus 398 ~~~iRis~~~~~~e~i~~~~~~l~~~l 424 (428)
T 1iay_A 398 PGWFRVCFANMDDGTVDIALARIRRFV 424 (428)
T ss_dssp SSEEEEECSSSCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 479999998 67778888888776653
No 100
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=61.37 E-value=23 Score=30.85 Aligned_cols=84 Identities=14% Similarity=0.082 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--Cc
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD--GL 153 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~--G~ 153 (276)
+.++.|.+.+++. +++++.+. +|. ..+++-+.+ .. ..++.++|. +.+..+..|..+. +.
T Consensus 296 ~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~~~~~-------~~-------~~~~~~~l~~~~gi~v~~g~~~~~~~~ 358 (389)
T 1gd9_A 296 RRRKLVWKRLNEM-GLPTVKPK--GAFYIFPRIRDTG-------LT-------SKKFSELMLKEARVAVVPGSAFGKAGE 358 (389)
T ss_dssp HHHHHHHHHHHHT-TCCCCCCC--BTTEECCBCGGGT-------CC-------HHHHHHHHHHHTCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHc-CCeecCCC--eeeEEEEeccCCC-------CC-------HHHHHHHHHHhCCEEEeCchhhCCCCC
Confidence 4566777778776 67665432 232 222321101 00 135677775 6676666655442 46
Q ss_pred eeEEEEecCCcccHHHHHHHHHHHh
Q psy13413 154 ACVRFGMVTAETDITELLSLVEETG 178 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~G 178 (276)
.+|||+...++.+++++++.+.+.-
T Consensus 359 ~~iRi~~~~~~~~i~~~l~~l~~~~ 383 (389)
T 1gd9_A 359 GYVRISYATAYEKLEEAMDRMERVL 383 (389)
T ss_dssp TBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHH
Confidence 7999999887777777777766543
No 101
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=60.71 E-value=6.5 Score=35.53 Aligned_cols=97 Identities=10% Similarity=0.053 Sum_probs=54.9
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecC--CCCCCCCchHHHHHHHHHHHHHHHHH-hcCCcceec-c
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVP--PAWGATDTDQAKAELNRLNIQVVRTL-RTSDAAFSL-G 147 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP--~~w~~~~~d~~k~ELnKLN~eLl~kL-qesd~aFss-G 147 (276)
.+....+.++.|.+.+++. ++.++ +..- ....+++.. .+ .+. .+++ ..+|.++| ++.+..+.. |
T Consensus 326 ~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~-~~~~~~~~~~~~~---~~~----~~~~--~~~l~~~L~~~~gv~~~~~~ 393 (467)
T 2oqx_A 326 WLAYRIAQVQYLVDGLEEI-GVVCQ-QAGG-HAAFVDAGKLLPH---IPA----DQFP--AQALACELYKVAGIRAVEIG 393 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCCEE-EECS-SCEEEEHHHHSTT---SCG----GGCH--HHHHHHHHHHHHCEECEEES
T ss_pred HHHHHHHHHHHHHHHHHHC-CCeee-cCCc-eEEEEechhhccc---CCc----cccc--HHHHHHHHHHhcCceecccc
Confidence 4455556677888888776 67766 3221 223333321 11 111 1110 44667777 665555543 2
Q ss_pred cc------------cCCceeEEEEec---CCcccHHHHHHHHHHHhHh
Q psy13413 148 EG------------TDGLACVRFGMV---TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 148 ~~------------~~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrE 180 (276)
.. ..+..+|||... +++.||+++++.+.+.-++
T Consensus 394 ~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~ 441 (467)
T 2oqx_A 394 SFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_dssp HHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHS
T ss_pred cccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhh
Confidence 21 112479999988 6788999999888766443
No 102
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=60.61 E-value=54 Score=29.83 Aligned_cols=123 Identities=11% Similarity=0.080 Sum_probs=62.1
Q ss_pred HHHhHHHHHHHHHHHhcC----CCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee---
Q psy13413 73 LQATVAHKASFISLVEAS----PKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS--- 145 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~----psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs--- 145 (276)
.....+.++.|.+.+++. ++++++....-..+..+.+.+.+. ..+ .+.+.|++.+....
T Consensus 304 ~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~~l~~~GI~v~~~~ 369 (447)
T 3h7f_A 304 QRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL-------DGQ-------AAEDLLHEVGITVNRNA 369 (447)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC-------CHH-------HHHHHHHHTTEECBC--
T ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC-------CHH-------HHHHHHHHCCeEEeccc
Confidence 344555667777777655 578877532222344555544331 111 12233444343333
Q ss_pred -cc--cccCCceeEEEEec------CCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhHhhhceecceeec
Q psy13413 146 -LG--EGTDGLACVRFGMV------TAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAIDYVWTQLKVFVQ 216 (276)
Q Consensus 146 -sG--~~~~G~~CVRfGMv------T~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~d~l~RqvPvv~~ 216 (276)
-+ .......+||+|.- .++.|++++++.+.+.-.+.++.. ++.+ |+ ++.+|.+..|+.
T Consensus 370 i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~~~~~~--~~~~----~~-----~v~~~~~~~~~~-- 436 (447)
T 3h7f_A 370 VPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALATGSSVD--VSAL----KD-----RATRLARAFPLY-- 436 (447)
T ss_dssp -----------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHSGGGCC--HHHH----HH-----HHHHHHHHSCSS--
T ss_pred CCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhccCchh--HHHH----HH-----HHHHHHHhCCCC--
Confidence 11 11122467999874 346788888888877655543311 2222 11 222566788887
Q ss_pred Cceeee
Q psy13413 217 CSLVNW 222 (276)
Q Consensus 217 gSvvNW 222 (276)
.....|
T Consensus 437 ~~~~~~ 442 (447)
T 3h7f_A 437 DGLEEW 442 (447)
T ss_dssp TTGGGC
T ss_pred CCchhh
Confidence 665555
No 103
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=60.38 E-value=45 Score=28.90 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC--Cce
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD--GLA 154 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~--G~~ 154 (276)
+.++.|.+.+++. +.++.+. +|. ..+++ |.++. ..++.++|.+.+..+..|..+. +..
T Consensus 291 ~~~~~l~~~L~~~--~~~~~~~--~~~~~~~~~-~~~~~--------------~~~~~~~l~~~gi~v~~g~~f~~~~~~ 351 (376)
T 2dou_A 291 ERALGMAEALKGV--LSLLPPR--ATMYLWGRL-PEGVD--------------DLEFGLRLVERGVALAPGRGFGPGGKG 351 (376)
T ss_dssp HHHHHHHHHHTTT--SEECCCC--BSSEEEEEC-CTTCC--------------HHHHHHHHHHTTEECEEGGGGCGGGTT
T ss_pred HHHHHHHHHHHHh--cCccCCC--eeEEEEEEC-CCCCC--------------HHHHHHHHHHCCEEEcCchhhCCCCCC
Confidence 4566677777765 6655332 243 33444 33210 1246666765566665554432 467
Q ss_pred eEEEEecCCcccHHHHHHHHHH
Q psy13413 155 CVRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 155 CVRfGMvT~d~DV~ELVd~I~~ 176 (276)
+||++...++.+++++++.+.+
T Consensus 352 ~~Ris~~~~~~~i~~~l~~l~~ 373 (376)
T 2dou_A 352 FVRIALVRPLEELLEAAKRIRE 373 (376)
T ss_dssp EEEEECCSCHHHHHHHHHHHHH
T ss_pred eEEEEecCCHHHHHHHHHHHHH
Confidence 9999998766677777766654
No 104
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=60.19 E-value=20 Score=30.68 Aligned_cols=96 Identities=14% Similarity=0.045 Sum_probs=56.2
Q ss_pred hhhhhhHHHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcce
Q psy13413 65 FFVTHVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAF 144 (276)
Q Consensus 65 ~l~~~i~iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aF 144 (276)
.|+.....+....+.++.+.+.+++. ++.+...+.-++...+++ |.. . .. ..++.++|.+.+..+
T Consensus 247 ~l~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~-~~~--~----~~-------~~~~~~~l~~~gi~v 311 (347)
T 1jg8_A 247 ALTKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRT-DNL--K----VN-------AHGFIEALRNSGVLA 311 (347)
T ss_dssp HHHHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEEC-TTS--S----SC-------HHHHHHHHHHHTEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEc-ccc--c----CC-------HHHHHHHHHHCCCEE
Confidence 35555555666667788888888776 666422223345555554 321 0 00 124666666555555
Q ss_pred ecccccCCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 145 SLGEGTDGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 145 ssG~~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
..+ |..+||+.+- .++.|++++++.+.+.-+
T Consensus 312 ~~~----~~~~iRl~~~~~~~~e~i~~~~~~l~~~l~ 344 (347)
T 1jg8_A 312 NAV----SDTEIRLVTHKDVSRNDIEEALNIFEKLFR 344 (347)
T ss_dssp EEE----ETTEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ecC----CCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 432 2457998863 578888888888876543
No 105
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=59.41 E-value=32 Score=30.19 Aligned_cols=90 Identities=13% Similarity=0.035 Sum_probs=52.9
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceeccccc-
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGT- 150 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~- 150 (276)
.....+.++.|.+.+++. +++++.+. .++..|++ |.+ . . ..++.++|. +.+.....+..+
T Consensus 304 ~~~~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~-~~~-------~---~----~~~~~~~L~~~~gi~v~~~~~~~ 365 (401)
T 2bwn_A 304 RDAQQMHAKVLKMRLKAL-GMPIIDHG--SHIVPVVI-GDP-------V---H----TKAVSDMLLSDYGVYVQPINFPT 365 (401)
T ss_dssp HHHHHHHHHHHHHHHHHH-TCCBCCCS--SSCEEEEC-CCH-------H---H----HHHHHHHHHHHHCEECCEECTTT
T ss_pred HHHHHHHHHHHHHHHHHC-CCcccCCC--CCeEEEEe-CCh-------H---H----HHHHHHHHHhcCCEEEeecCCCC
Confidence 344455667777777765 77766543 24555543 211 1 1 234666663 445444433221
Q ss_pred --CCceeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 151 --DGLACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 151 --~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
.|..+||++.- .++.|++++++.+.+..++
T Consensus 366 ~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 366 VPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp SCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred CCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 25579999988 5788999999988776543
No 106
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=58.83 E-value=13 Score=33.57 Aligned_cols=102 Identities=10% Similarity=0.105 Sum_probs=56.5
Q ss_pred hhhhhH--HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEE-e---ecCCCCCCCCchHHHHHHHHHHHHHHHHH-h
Q psy13413 66 FVTHVD--ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGV-R---YVPPAWGATDTDQAKAELNRLNIQVVRTL-R 138 (276)
Q Consensus 66 l~~~i~--iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~V-R---YvP~~w~~~~~d~~k~ELnKLN~eLl~kL-q 138 (276)
|+..++ .+....+.++.|.+.+++ +++.++.+.. |.+.+ + ++|.. .. .... ..+++++| +
T Consensus 316 l~~~~~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~--~~~~~~~~~~~~~~~-~~--~~~~-------~~~l~~~L~~ 382 (467)
T 1ax4_A 316 LEEGTEEEYLHYRIGQVKYLGDRLRE-AGIPIQYPTG--GHAVFVDCKKLVPQI-PG--DQFP-------AQAVINALYL 382 (467)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHH-TTCCBCSSCC--SSEEEEESTTTCTTS-CG--GGCH-------HHHHHHHHHH
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHh-CCCCcccCCC--ceEEEEehhhhcccc-cc--CCCC-------HHHHHHHHHH
Confidence 444443 555556677888888877 6777664332 33322 2 11211 00 0000 24566677 6
Q ss_pred cCCcceec-ccc------------cCCceeEEEEec---CCcccHHHHHHHHHHHhHh
Q psy13413 139 TSDAAFSL-GEG------------TDGLACVRFGMV---TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 139 esd~aFss-G~~------------~~G~~CVRfGMv---T~d~DV~ELVd~I~~~GrE 180 (276)
+.+..+.. |.. ..+..+|||+.- +++.|++++++.+.+..++
T Consensus 383 ~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 440 (467)
T 1ax4_A 383 ESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEK 440 (467)
T ss_dssp HHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHH
T ss_pred hcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 55555443 321 012479999986 6778888888888766543
No 107
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=58.29 E-value=20 Score=31.73 Aligned_cols=84 Identities=13% Similarity=0.063 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCce-EEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC----
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAG-LGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD---- 151 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waG-LG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~---- 151 (276)
+.++.|.+.+++. ++.++.+. +| ...+++. . +...+ ..++.++|. +.+..+..|..+.
T Consensus 294 ~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~~-~-~~~~~-----------~~~~~~~l~~~~gi~v~~g~~f~~~~~ 357 (411)
T 2o0r_A 294 ARRDRLAAGLTEI-GFAVHDSY--GTYFLCADPR-P-LGYDD-----------STEFCAALPEKVGVAAIPMSAFCDPAA 357 (411)
T ss_dssp HHHHHHHHHHHHH-TCEECCCC--BSSEEEEECG-G-GTCCC-----------HHHHHHHHHHHHSEECEEGGGGSCCC-
T ss_pred HHHHHHHHHHHHc-CCEecCCC--eeEEEEEecC-C-CCCCC-----------HHHHHHHHHHhCCEEEcChhhhCCCcc
Confidence 4566677777765 67766432 24 4455552 2 11000 124555553 4455554443331
Q ss_pred ---------CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 152 ---------GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 152 ---------G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
+..+|||+...++.|++++++.+.+.
T Consensus 358 ~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~ 392 (411)
T 2o0r_A 358 GQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVL 392 (411)
T ss_dssp -------CCGGGCEEEECCSCHHHHHHHHHHHGGG
T ss_pred ccccccccCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 45799999987777888888877654
No 108
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=58.01 E-value=22 Score=31.83 Aligned_cols=47 Identities=21% Similarity=0.238 Sum_probs=32.4
Q ss_pred HHHHHhcCCcceecccccC-CceeEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 133 VVRTLRTSDAAFSLGEGTD-GLACVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~-G~~CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
+.+.|++.+.++..|..++ +..|||+++.+++.+++++++.+.+.-+
T Consensus 338 ~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 338 LVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFNVFLERLANMKL 385 (391)
T ss_dssp HHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHHHHHHHHHSCC-
T ss_pred HHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHH
Confidence 3444566666666555543 3679999999877788888888876543
No 109
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=57.74 E-value=48 Score=28.37 Aligned_cols=95 Identities=8% Similarity=-0.008 Sum_probs=55.8
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCC-----CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceec
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMP-----GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSL 146 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~-----~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFss 146 (276)
++....+.++.|.+.+++.|++++..+. ++ .+..|++-+.++ .. ..++.++|.+.+.....
T Consensus 249 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~-------~~~l~~~L~~~gi~v~~ 314 (375)
T 2fnu_A 249 LMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSN-HLYPILMHQKFF------TC-------KKLILESLHKRGILAQV 314 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCC-SCEEEEECGGGG------GG-------HHHHHHHHHHTTEECBC
T ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcce-EEEEEEeCcccc------ch-------HHHHHHHHHHCCCCccc
Confidence 4455566778888889888888887652 22 233555522110 01 13466667654444331
Q ss_pred c--cc-----c--------------CCceeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 147 G--EG-----T--------------DGLACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 147 G--~~-----~--------------~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
+ +. + .+..+||+.+- .++.|++.+++.+.+..++
T Consensus 315 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 371 (375)
T 2fnu_A 315 HYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES 371 (375)
T ss_dssp CCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 10 0 01368999977 4778999999888776543
No 110
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=57.72 E-value=36 Score=29.92 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEE-EEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccCCc
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLG-GVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTDGL 153 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG-~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~G~ 153 (276)
..+.++.|.+.+++. +++++.+. .|.- .+++ | . + ..++.++|. +.+..+..|..+...
T Consensus 302 ~~~~~~~l~~~L~~~-g~~~~~~~--~~~~~~~~~-~-~----~-----------~~~l~~~l~~~~gi~v~~g~~f~~~ 361 (389)
T 1o4s_A 302 FKERKNFVVERLKKM-GVKFVEPE--GAFYLFFKV-R-G----D-----------DVKFCERLLEEKKVALVPGSAFLKP 361 (389)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCCCS--BSSEEEEEC-S-S----C-----------HHHHHHHHHHHHCEECEEGGGGTCT
T ss_pred HHHHHHHHHHHHHhc-CCeeecCC--cceEEEEeC-C-C----C-----------HHHHHHHHHHHCCEEEeCchhcCCC
Confidence 345567777778776 67765432 2322 2232 2 1 0 124666664 556666555444323
Q ss_pred eeEEEEecCCcccHHHHHHHHHHH
Q psy13413 154 ACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
.++|++...++.|++++++.+.+.
T Consensus 362 ~~~Ris~~~~~~~l~~~l~~l~~~ 385 (389)
T 1o4s_A 362 GFVRLSFATSIERLTEALDRIEDF 385 (389)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCHHHHHHHHHHHHHH
Confidence 499999987666777777766543
No 111
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=56.65 E-value=40 Score=29.35 Aligned_cols=83 Identities=12% Similarity=0.111 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceeccccc----CC
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGT----DG 152 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~----~G 152 (276)
+.++.|.+.+++. ++.++.+..- ....+++ |.. ...+ ..++.++|. +.+..+..|..+ .+
T Consensus 297 ~~~~~l~~~L~~~-g~~~~~~~~g-~~~~~~~-~~~-~~~~-----------~~~~~~~l~~~~gi~v~~g~~f~~~~~~ 361 (386)
T 1u08_A 297 QKRDILVNALNES-RLEILPCEGT-YFLLVDY-SAV-STLD-----------DVEFCQWLTQEHGVAAIPLSVFCADPFP 361 (386)
T ss_dssp HHHHHHHHHTTSS-SCEECCCCBS-SEEEEEC-TTT-CCSC-----------HHHHHHHHHHHSCEECEEGGGGCSSCCC
T ss_pred HHHHHHHHHHHHC-CCeecCCCce-EEEEEec-CCC-CCCC-----------HHHHHHHHHHhCCEEEeCchHhCCCCCC
Confidence 4566677777765 6776644321 2444544 221 0000 124556554 456555544433 35
Q ss_pred ceeEEEEecCCcccHHHHHHHHH
Q psy13413 153 LACVRFGMVTAETDITELLSLVE 175 (276)
Q Consensus 153 ~~CVRfGMvT~d~DV~ELVd~I~ 175 (276)
..+|||+...++.||+++++.+.
T Consensus 362 ~~~iRis~~~~~~~i~~~~~~l~ 384 (386)
T 1u08_A 362 HKLIRLCFAKKESTLLAAAERLR 384 (386)
T ss_dssp SCEEEEECCSCHHHHHHHHHHHT
T ss_pred CCEEEEEEcCCHHHHHHHHHHHh
Confidence 68999999987778888887764
No 112
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=56.25 E-value=38 Score=29.97 Aligned_cols=87 Identities=11% Similarity=0.220 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceE-EEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh-cCCcceecccccC--Cc
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGL-GGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD--GL 153 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGL-G~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~--G~ 153 (276)
+.++.|.+.+++. ++.++.+. +|. ..+++ |.++.. .. ..++.++|. +.+..+..|..+. +.
T Consensus 306 ~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~-~~~~~~----~~-------~~~~~~~l~~~~gi~v~~g~~f~~~~~ 370 (412)
T 2x5d_A 306 QRRDVLVKGLREA-GWMVENPK--ASMYVWAKI-PEPYAH----LG-------SLEFAKKLLQDAKVSVSPGIGFGDYGD 370 (412)
T ss_dssp HHHHHHHHHHHHH-TCCCCCCS--BSSEEEEEC-CTTTGG----GC-------HHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHC-CCEecCCC--eeeEEEEEc-CCccCC----CC-------HHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence 4566677777765 66655332 343 33443 433210 00 134566663 3465555554432 45
Q ss_pred eeEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 154 ACVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
.+||++...++.+++++++.+.+.-+
T Consensus 371 ~~iRis~~~~~~~l~~~l~~l~~~l~ 396 (412)
T 2x5d_A 371 DHVRFALIENRDRLRQAVRGIKAMFR 396 (412)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 79999999877777777777766544
No 113
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=55.81 E-value=31 Score=30.96 Aligned_cols=86 Identities=13% Similarity=0.072 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhc-CCcceeccccc--CCc
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRT-SDAAFSLGEGT--DGL 153 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqe-sd~aFssG~~~--~G~ 153 (276)
.+.++.|.+.+++. ++.+..+..- -...+. +| ++ + . .++.++|.+ .+..+..|..+ .|.
T Consensus 351 ~~~~~~l~~~L~~~-g~~~~~~~~~-~~~~~~-~~-~~---~----~-------~~~~~~l~~~~gI~v~pg~~f~~~~~ 412 (449)
T 3qgu_A 351 KENAQILKTTFTEM-GFSVYGGDDA-PYIWVG-FP-GK---P----S-------WDVFAEILERCNIVTTPGSGYGPAGE 412 (449)
T ss_dssp HHHHHHHHHHHHHT-TCCEEESSSS-SEEEEE-CT-TS---C----H-------HHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred HHHHHHHHHHHHHC-CCeeeCCCCe-eEEEEE-CC-CC---C----H-------HHHHHHHHHHCCEEEecchHhCCCCC
Confidence 34566777777765 6776654321 122222 23 21 0 1 245555544 35555555433 346
Q ss_pred eeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 154 ACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 154 ~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
.||||++..++.||+++++.+.+..++
T Consensus 413 ~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 413 GFVRASAFGSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp TEEEEECCSCHHHHHHHHHHHHHHHC-
T ss_pred CeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 899999888888999999888776544
No 114
>3brv_A Inhibitor of nuclear factor kappa-B kinase subuni; NEMO, IKK-gamma, FIP3, ikkap1, NF-KB essential modulator, at binding, kinase, nucleotide-binding, phosphoprotein; 2.20A {Synthetic} PDB: 3brt_A
Probab=54.87 E-value=9.8 Score=26.58 Aligned_cols=26 Identities=8% Similarity=-0.009 Sum_probs=22.3
Q ss_pred HHHhHHHHHHHHHHhhhhHHHhhHhhh
Q psy13413 181 EEESWKFIDSMAEIHHSPRRLTAIDYV 207 (276)
Q Consensus 181 IEessk~Le~MtE~vrKGI~~A~~d~l 207 (276)
||||++|+..|+-+|+..+++ |...+
T Consensus 12 leEn~~~~~~L~sliqdt~~e-q~~Sl 37 (48)
T 3brv_A 12 VAEAHNLCTLLENAIQDTVRE-QDQSF 37 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTSCG
T ss_pred HHHHHHHHHHHHHHHHHHHHH-Hhcch
Confidence 899999999999999999998 44333
No 115
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=54.69 E-value=9.4 Score=33.10 Aligned_cols=46 Identities=17% Similarity=0.157 Sum_probs=33.5
Q ss_pred HHHHHHhc-CCcceecccccC----CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 132 QVVRTLRT-SDAAFSLGEGTD----GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 132 eLl~kLqe-sd~aFssG~~~~----G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
++.++|.+ .+..+..|..+. +..+||++...++.||+++++.+.+.
T Consensus 321 ~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~ 371 (376)
T 3ezs_A 321 NFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETY 371 (376)
T ss_dssp HHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHHHH
Confidence 56666765 566666665443 56899999887888888888877654
No 116
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=52.81 E-value=13 Score=32.63 Aligned_cols=50 Identities=26% Similarity=0.294 Sum_probs=34.6
Q ss_pred HHHHHHhc-CCcceecccccC---CceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRT-SDAAFSLGEGTD---GLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqe-sd~aFssG~~~~---G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
++.++|.+ .+..+..|..+. +..+||+++..++.|++++++.+.+..++.
T Consensus 329 ~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 329 AFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp HHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 35555544 366666555443 368999999988888888888887765543
No 117
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=52.69 E-value=86 Score=29.13 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=54.2
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee----ccc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS----LGE 148 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs----sG~ 148 (276)
.....+.++.|.+.+++. +++++.+..-.-+..+.+.+.++ ..++ +.+.|.+.+.... -|.
T Consensus 327 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~-------~~~~-------~~~~L~~~gI~v~~~~~pg~ 391 (483)
T 1rv3_A 327 QRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKGT-------DGGR-------AEKVLEACSIACNKNTCPGD 391 (483)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTC-------CHHH-------HHHHHHHTTEECEEECCSSC
T ss_pred HHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCCCC-------CHHH-------HHHHHHhCCcEEecCCCCCC
Confidence 444556677787877776 88887653211244555544331 1122 3334444444433 233
Q ss_pred c-cCCceeEEEEec--CC----cccHHHHHHHHHHHhHh
Q psy13413 149 G-TDGLACVRFGMV--TA----ETDITELLSLVEETGQQ 180 (276)
Q Consensus 149 ~-~~G~~CVRfGMv--T~----d~DV~ELVd~I~~~GrE 180 (276)
. ..+..+|||+.. ++ +.|++++++.|.+.-+.
T Consensus 392 ~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 392 KSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp SCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 1 124579999987 45 78999999999877554
No 118
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=51.97 E-value=71 Score=27.79 Aligned_cols=80 Identities=14% Similarity=0.173 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceec-ccccCCce
Q psy13413 76 TVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSL-GEGTDGLA 154 (276)
Q Consensus 76 TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFss-G~~~~G~~ 154 (276)
..+.|+.|.+.+++.+++..+.+. -+....++. | . -.++.++|.+.+..... |..+....
T Consensus 272 ~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~-~-~----------------~~~l~~~L~~~gI~v~~~g~~~~~~~ 332 (356)
T 1fg7_A 272 IIAEREYLIAALKEIPCVEQVFDS-ETNYILARF-K-A----------------SSAVFKSLWDQGIILRDQNKQPSLSG 332 (356)
T ss_dssp HHHHHHHHHHHHHHSTTEEEECCC-SSSEEEEEE-T-T----------------HHHHHHHHHHTTEECEECTTSTTCTT
T ss_pred HHHHHHHHHHHHHhCCCceEECCC-CCeEEEEEC-C-C----------------HHHHHHHHHHCCEEEEECCCCCCCCC
Confidence 345567788888877764323222 223334443 2 0 12567777666666665 54433235
Q ss_pred eEEEEecCCcccHHHHHHHHH
Q psy13413 155 CVRFGMVTAETDITELLSLVE 175 (276)
Q Consensus 155 CVRfGMvT~d~DV~ELVd~I~ 175 (276)
++|++..+ +.|++++++.+.
T Consensus 333 ~iRis~~~-~~e~~~~~~~l~ 352 (356)
T 1fg7_A 333 CLRITVGT-REESQRVIDALR 352 (356)
T ss_dssp EEEEECCC-HHHHHHHHHHHH
T ss_pred eEEEEeCC-HHHHHHHHHHHH
Confidence 99999875 567777776654
No 119
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=51.57 E-value=12 Score=33.33 Aligned_cols=93 Identities=9% Similarity=0.014 Sum_probs=52.0
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeee--cC----CCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHh----cCCc
Q psy13413 73 LQATVAHKASFISLVEASPKLTLV--DM----PGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLR----TSDA 142 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelV--e~----~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLq----esd~ 142 (276)
.....+.++.|.+.+++.+++++. .+ ...+++.+|.+..... ... ++.++|+ +.+.
T Consensus 308 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~~l~~i~~~~G~ 373 (432)
T 3a9z_A 308 EAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL-------RGY-------MVLAQCQTLLASVGA 373 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC-------CHH-------HHHHHCSSEECBSSC
T ss_pred HHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC-------cHH-------HHHHHhcCeEEeccc
Confidence 344456677788877765544332 22 2344577887754220 011 2233332 3455
Q ss_pred ceecccc--------cCC------ceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 143 AFSLGEG--------TDG------LACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 143 aFssG~~--------~~G------~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
.|..+.. ..| ..||||+.- +++.|++++++.+.+..+
T Consensus 374 ~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~ 426 (432)
T 3a9z_A 374 SCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVN 426 (432)
T ss_dssp GGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 5544210 012 369999988 378899999998877644
No 120
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=50.33 E-value=49 Score=30.18 Aligned_cols=48 Identities=13% Similarity=0.029 Sum_probs=35.2
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrEI 181 (276)
.++.++|.+.+..+..+. +..+|||. .+.++.|++++++.+.+.-+++
T Consensus 407 ~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 456 (460)
T 3gju_A 407 PQVATALAASGVIGRAMP---QGDILGFAPPLCLTREQADIVVSKTADAVKSV 456 (460)
T ss_dssp HHHHHHHHHTTEECEECS---SSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEecCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 457777777776665432 35799998 6788899999999988775543
No 121
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=50.33 E-value=39 Score=31.44 Aligned_cols=49 Identities=8% Similarity=0.145 Sum_probs=36.0
Q ss_pred HHHHHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHhHH
Q psy13413 129 LNIQVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 129 LN~eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrEIE 182 (276)
+..++.++|.+.+..+..+ | .+|||. .+.++.|++++++.+.+.-+++.
T Consensus 403 ~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 403 IGYICRERCFANNLIMRHV----G-DRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp HHHHHHHHHHHTTBCCEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcEEEec----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3456777777766665532 3 899998 67889999999999987765543
No 122
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=48.95 E-value=22 Score=31.74 Aligned_cols=49 Identities=10% Similarity=0.044 Sum_probs=32.9
Q ss_pred HHHHHHhcCCcceec-cccc-----CCceeEEEEecC-CcccHHHHHHHHHHHhHh
Q psy13413 132 QVVRTLRTSDAAFSL-GEGT-----DGLACVRFGMVT-AETDITELLSLVEETGQQ 180 (276)
Q Consensus 132 eLl~kLqesd~aFss-G~~~-----~G~~CVRfGMvT-~d~DV~ELVd~I~~~GrE 180 (276)
++.+.|.+.+..+.. |..+ .+..+|||+... ++.+|++.++.+.+.-++
T Consensus 364 ~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 364 RVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVEELEVAMDGVATCVLL 419 (427)
T ss_dssp HHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 455666665655554 3333 246899999986 567888888887766554
No 123
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=48.41 E-value=73 Score=29.58 Aligned_cols=51 Identities=6% Similarity=0.143 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHhHHHh
Q psy13413 129 LNIQVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 129 LN~eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrEIEes 184 (276)
+..++.++|.+.+..+.. .| .+|||. .+.++.|++++++.+.+.-+++.+.
T Consensus 405 ~~~~~~~~l~~~Gv~v~~----~g-~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 405 FTLKIDERCFELGLIVRP----LG-DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp HHHHHHHHHHHTTEECEE----ET-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEe----cC-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888777766553 23 799998 7789999999999998887665543
No 124
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=48.26 E-value=50 Score=28.62 Aligned_cols=87 Identities=20% Similarity=0.247 Sum_probs=51.2
Q ss_pred HHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc---
Q psy13413 74 QATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT--- 150 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~--- 150 (276)
....+.++.|.+.+++. ++++.+ +-.++..+++ |.. .. ..++.++|.+.+.....|..+
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~-~~~----------~~----~~~l~~~l~~~gi~v~~~~~~~~~ 354 (384)
T 1bs0_A 293 EKLAALITRFRAGVQDL-PFTLAD--SCSAIQPLIV-GDN----------SR----ALQLAEKLRQQGCWVTAIRPPTVP 354 (384)
T ss_dssp HHHHHHHHHHHHHHTTS-SCEECS--CCSSBCCEEE-ESH----------HH----HHHHHHHHHHTTEECCEECTTSSC
T ss_pred HHHHHHHHHHHHHHHhc-CCcccC--CCCCEEEEEe-CCH----------HH----HHHHHHHHHHCCcEEEeecCCCCC
Confidence 33445667777777765 466542 2223333433 211 11 235677776656555544432
Q ss_pred CCceeEEEEecC--CcccHHHHHHHHHHHh
Q psy13413 151 DGLACVRFGMVT--AETDITELLSLVEETG 178 (276)
Q Consensus 151 ~G~~CVRfGMvT--~d~DV~ELVd~I~~~G 178 (276)
.+..+||++.-. ++.|++++++.+.+.|
T Consensus 355 ~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~~ 384 (384)
T 1bs0_A 355 AGTARLRLTLTAAHEMQDIDRLLEVLHGNG 384 (384)
T ss_dssp TTCEEECCBCCTTCCHHHHHHHHHHHHHHC
T ss_pred CCCceEEEEEcCCCCHHHHHHHHHHHHhhC
Confidence 346899999873 7889999998887653
No 125
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=46.31 E-value=36 Score=31.07 Aligned_cols=48 Identities=13% Similarity=0.180 Sum_probs=35.0
Q ss_pred HHHHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHhHH
Q psy13413 130 NIQVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 130 N~eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrEIE 182 (276)
-.++.++|.+.+..+..+ | .+|||. .+.++.+++++++.+.+.-+++.
T Consensus 401 ~~~~~~~l~~~Gv~v~~~----g-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 401 GTLCRDIFFRNNLIMRAC----G-DHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp HHHHHHHHHHTTEECEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecC----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345677777767666543 3 799998 57888999999999987755543
No 126
>3obf_A Putative transcriptional regulator, ICLR family; structural genomics, PSI-2, protein structure initiative; 2.16A {Arthrobacter aurescens}
Probab=46.18 E-value=48 Score=26.54 Aligned_cols=58 Identities=10% Similarity=-0.001 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHh
Q psy13413 125 ELNRLNIQVVRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 125 ELnKLN~eLl~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEes 184 (276)
+.+.|-. +++.++.+-+++.++...|..||-+-+. + ++..++++++.+.+++++|++.
T Consensus 95 ~~~~l~~--l~~iR~~Gya~~~~e~~~g~~~iAaPI~~~~g~~~aalsv~~p~~r~~~~~~~~~~~~l~~aa~~is~~ 170 (176)
T 3obf_A 95 VEAYLLR--LKESMERGWAVNFGETSIEEVGVASPVYDHRGNMVASVLIPAPKFRVSQDTLNSLGEACAAAAAKVTTR 170 (176)
T ss_dssp HHHHHHH--HHHHHHHTSEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHH--HHHHHHcCCEeeccccccCcEEEEEEEECCCCCEEEEEEeEeehhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3344443 6677778888888887777777654332 2 2224788999999999998764
No 127
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=45.98 E-value=74 Score=27.57 Aligned_cols=76 Identities=8% Similarity=-0.042 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccCCceeEE
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLACVR 157 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~G~~CVR 157 (276)
+.++.|.+.+++ +++.++.. -++...+++ | . + -.++.++|.+.+..+..| +...++|
T Consensus 289 ~~~~~l~~~L~~-~g~~~~~~--~~~~~~~~~-~-~------~---------~~~l~~~l~~~gi~v~~~---~~~~~iR 345 (369)
T 3cq5_A 289 VERVRVAARLEE-LGYAVVPS--ESNFVFFGD-F-S------D---------QHAAWQAFLDRGVLIRDV---GIAGHLR 345 (369)
T ss_dssp HHHHHHHHHHHH-HTCEEECC--SSSEEEEEC-C-S------S---------HHHHHHHHHHTTEECBCC---SCTTEEE
T ss_pred HHHHHHHHHHHh-CCCEECCC--CCeEEEEEC-C-C------C---------HHHHHHHHHHCCEEEEEC---CCCCeEE
Confidence 456677777776 47777632 224444543 2 1 0 124666776666666655 2357899
Q ss_pred EEecCCcccHHHHHHHHHHH
Q psy13413 158 FGMVTAETDITELLSLVEET 177 (276)
Q Consensus 158 fGMvT~d~DV~ELVd~I~~~ 177 (276)
++.. .+.|++++++.+.+.
T Consensus 346 is~~-~~~~i~~~~~~l~~~ 364 (369)
T 3cq5_A 346 TTIG-VPEENDAFLDAAAEI 364 (369)
T ss_dssp EECC-CHHHHHHHHHHHHHH
T ss_pred EEeC-CHHHHHHHHHHHHHH
Confidence 9987 467777777776544
No 128
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=45.60 E-value=1.1e+02 Score=26.87 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=33.3
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEEe--cCCcccHHHHHHHHHHHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFGM--VTAETDITELLSLVEETGQ 179 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfGM--vT~d~DV~ELVd~I~~~Gr 179 (276)
.++.++|.+.+..+..|.. ...+|||+. ..++.|++++++.+.+.-+
T Consensus 374 ~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~ 422 (426)
T 1sff_A 374 AEIVARARDKGLILLSCGP--YYNVLRILVPLTIEDAQIRQGLEIISQCFD 422 (426)
T ss_dssp HHHHHHHHHTTEECEEEST--TSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecCCC--CCCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 4577777766766664433 257899976 5788899999988876643
No 129
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=45.15 E-value=64 Score=25.26 Aligned_cols=64 Identities=9% Similarity=0.072 Sum_probs=47.5
Q ss_pred CcceecccccCC-ceeEEEEe-cCCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhH
Q psy13413 141 DAAFSLGEGTDG-LACVRFGM-VTAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAI 204 (276)
Q Consensus 141 d~aFssG~~~~G-~~CVRfGM-vT~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~ 204 (276)
+.+|.-|...+. ..||-+|. +--+.++++..+.+.+.-..++++.+-|+.--+-+++-|..-+.
T Consensus 58 ~~~yv~a~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~ 123 (133)
T 1fxk_C 58 AGSFIKAELKDTSEVIMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSP 123 (133)
T ss_dssp TTEEEEEECCSTTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCEEEEEcCCCEEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666543 68999996 67888999999999888888888877777766666666655444
No 130
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=44.89 E-value=21 Score=31.84 Aligned_cols=49 Identities=14% Similarity=0.136 Sum_probs=34.6
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~Gr 179 (276)
.++.++|.+.+..+..|..+.+..+|||. ...++.|++++++.+.+.-+
T Consensus 380 ~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~ 430 (433)
T 1zod_A 380 AKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIE 430 (433)
T ss_dssp HHHHHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHH
Confidence 35667776667666655444345899995 46888999999998876644
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=44.68 E-value=66 Score=28.40 Aligned_cols=28 Identities=7% Similarity=0.109 Sum_probs=22.4
Q ss_pred eeEEEEec--CCcccHHHHHHHHHHHhHhH
Q psy13413 154 ACVRFGMV--TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 154 ~CVRfGMv--T~d~DV~ELVd~I~~~GrEI 181 (276)
.|||+.+- .++.|++.+++.+.+..+++
T Consensus 367 ~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 367 QVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred CEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 68999875 67889999999888776554
No 132
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=43.84 E-value=32 Score=30.49 Aligned_cols=50 Identities=10% Similarity=0.144 Sum_probs=33.8
Q ss_pred HHHHHHhcCCcceec-cccc-----CCceeEEEEecC-CcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRTSDAAFSL-GEGT-----DGLACVRFGMVT-AETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqesd~aFss-G~~~-----~G~~CVRfGMvT-~d~DV~ELVd~I~~~GrEI 181 (276)
++.+.|.+.+..+.. |..+ .+..+|||+... ++.+|+++++.+.+.-+++
T Consensus 359 ~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (423)
T 3ez1_A 359 RVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLA 415 (423)
T ss_dssp HHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHH
Confidence 455666666665554 4333 246899999975 7788888888887765543
No 133
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=43.76 E-value=1.2e+02 Score=27.00 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=32.6
Q ss_pred HHHHHHh-cCCcceeccccc--CCceeEEEEecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTLR-TSDAAFSLGEGT--DGLACVRFGMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kLq-esd~aFssG~~~--~G~~CVRfGMvT~d~DV~ELVd~I~~~Gr 179 (276)
+++++|. +.+..+..|..+ .|..+|||++..++.+|++.++.+.+...
T Consensus 376 ~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 376 DVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENILEACRRFKQLYK 426 (432)
T ss_dssp HHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCEEEeCchHhCCCCCCEEEEEecCCHHHHHHHHHHHHHHhh
Confidence 3444443 335555555443 35789999998888899999988877644
No 134
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=43.51 E-value=26 Score=31.26 Aligned_cols=50 Identities=12% Similarity=0.263 Sum_probs=34.4
Q ss_pred HHHHHHhcCCcceeccccc----------CCceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGT----------DGLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~----------~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
++.++|.+.+.....|..+ .+..+|||+...++.||+++++.+.+.-+++
T Consensus 381 ~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (444)
T 3if2_A 381 DLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVREL 440 (444)
T ss_dssp HHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 4666676656655554432 1247999999987888888888887765544
No 135
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=43.43 E-value=77 Score=27.61 Aligned_cols=25 Identities=12% Similarity=0.190 Sum_probs=21.1
Q ss_pred CceeEEEEecCCcccHHHHHHHHHH
Q psy13413 152 GLACVRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 152 G~~CVRfGMvT~d~DV~ELVd~I~~ 176 (276)
+..+|||++..++.||+++++.+.+
T Consensus 384 ~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 384 FEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp HTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred CCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 4689999999988899999887754
No 136
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=42.31 E-value=70 Score=27.94 Aligned_cols=44 Identities=14% Similarity=0.203 Sum_probs=32.0
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~Gr 179 (276)
++.++|.+.+..+..+ |..+|||. ...++.|++++++.+.+.-+
T Consensus 348 ~~~~~l~~~Gi~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 348 KVIQKCQENALLLISC----GENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp HHHHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5667777767766643 36799996 45788899999988876543
No 137
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=41.26 E-value=29 Score=31.38 Aligned_cols=47 Identities=11% Similarity=0.106 Sum_probs=32.9
Q ss_pred HHHHHHhcCCcceeccccc--CCceeEEEE--ecCCcccHHHHHHHHHHHh
Q psy13413 132 QVVRTLRTSDAAFSLGEGT--DGLACVRFG--MVTAETDITELLSLVEETG 178 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~--~G~~CVRfG--MvT~d~DV~ELVd~I~~~G 178 (276)
++.+.|.+.+..+..+..+ .+..+|||+ ...++.|++++++.+.+.-
T Consensus 399 ~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l 449 (452)
T 3n5m_A 399 SVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAM 449 (452)
T ss_dssp HHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 5667776667666544321 236899996 6688899999999887653
No 138
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=41.13 E-value=1.6e+02 Score=25.32 Aligned_cols=95 Identities=14% Similarity=0.201 Sum_probs=53.0
Q ss_pred HHHHHhHHHHHHHHHHHhcCCCeeeecCCCC---c--eEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCccee
Q psy13413 71 DILQATVAHKASFISLVEASPKLTLVDMPGW---A--GLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFS 145 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~psLelVe~~~w---a--GLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFs 145 (276)
.++....+.++.|.+.+++.+ +++...+.| . .+..|++-++. ...-..++.++|.+.+....
T Consensus 261 ~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~------------~~~~~~~l~~~l~~~gi~v~ 327 (393)
T 1mdo_A 261 ALNARRAAIAAQYHQAMADLP-FQPLSLPSWEHIHAWHLFIIRVDEAR------------CGITRDALMASLKTKGIGTG 327 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCEECCCSCEEEECCHHH------------HSSCHHHHHHHHHHTTBCCB
T ss_pred HHHHHHHHHHHHHHHHHhcCC-cccccCCCCCCCceeEEEEEEecccc------------cccCHHHHHHHHHhCCCCcc
Confidence 344555566777888888776 776533321 1 24455542100 00012356667766555444
Q ss_pred ccccc-----------------C----CceeEEEEec--CCcccHHHHHHHHHHHh
Q psy13413 146 LGEGT-----------------D----GLACVRFGMV--TAETDITELLSLVEETG 178 (276)
Q Consensus 146 sG~~~-----------------~----G~~CVRfGMv--T~d~DV~ELVd~I~~~G 178 (276)
.|... + +..+||+++- .++.|++.+++.+.+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 383 (393)
T 1mdo_A 328 LHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIA 383 (393)
T ss_dssp CCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred cccCccccChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 33211 1 1348999987 57889999988887653
No 139
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=40.36 E-value=17 Score=32.00 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=29.2
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEEecCCcccHHHHHHHHHH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfGMvT~d~DV~ELVd~I~~ 176 (276)
++.++|.+.+..+..|..++...|||++..+++.++.+.++.+.+
T Consensus 336 ~l~~~l~~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~ 380 (385)
T 1b5p_A 336 RAAERLLEAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFAR 380 (385)
T ss_dssp HHHHHHHHTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGG
T ss_pred HHHHHHHHCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 466667665666665554433569999988766666666655543
No 140
>4b6x_A AVRRPS4, avirulence protein; toxin, type 3 secreted effector; 2.20A {Pseudomonas syringae PV}
Probab=40.00 E-value=23 Score=27.60 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=25.8
Q ss_pred HHhHhHHHhHHHHHHHHHHhhhhHHHhhHh
Q psy13413 176 ETGQQEEESWKFIDSMAEIHHSPRRLTAID 205 (276)
Q Consensus 176 ~~GrEIEessk~Le~MtE~vrKGI~~A~~d 205 (276)
+.-.+|++.+-++.++++-+..+|++|+-+
T Consensus 26 ~lrq~I~DKQ~~i~~Lt~eLq~A~~eaNpa 55 (90)
T 4b6x_A 26 ALRQEIEDKQLMVNNLTDELQDAIDEANPA 55 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 345689999999999999999999998764
No 141
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=39.36 E-value=48 Score=28.35 Aligned_cols=85 Identities=11% Similarity=0.060 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCC-CceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccc-cc--CC
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPG-WAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGE-GT--DG 152 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~-waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~-~~--~G 152 (276)
.+.++.|.+.+++. ++.++.+.. -.++..|++- + ..++.++|.+.+....... .. +|
T Consensus 275 ~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~---------~---------~~~~~~~l~~~gi~~~~~~~~~~~~g 335 (371)
T 2e7j_A 275 VEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE---------V---------LYEISKKAKGGRFFLYRELKSRKIHG 335 (371)
T ss_dssp HHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH---------H---------HHHHHHHSSSGGGHHHHHHHHTTEEC
T ss_pred HHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC---------C---------HHHHHHHHHHCCEEEEeccccccccC
Confidence 57788888888877 888876542 1356666541 0 1245566655443332100 01 12
Q ss_pred --ceeEE-EEec---CCcccHHHHHHHHHHHhHh
Q psy13413 153 --LACVR-FGMV---TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 153 --~~CVR-fGMv---T~d~DV~ELVd~I~~~GrE 180 (276)
..+|| +++- .++.|++++++.+.+..++
T Consensus 336 ~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 336 IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence 46788 8887 6788999999888776543
No 142
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=38.86 E-value=35 Score=30.51 Aligned_cols=49 Identities=10% Similarity=0.080 Sum_probs=33.0
Q ss_pred HHHHHHhcCCcceec-cccc-----CCceeEEEEec-CCcccHHHHHHHHHHHhHh
Q psy13413 132 QVVRTLRTSDAAFSL-GEGT-----DGLACVRFGMV-TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 132 eLl~kLqesd~aFss-G~~~-----~G~~CVRfGMv-T~d~DV~ELVd~I~~~GrE 180 (276)
++.+.|.+.+..+.. |..+ .+..+|||+.. .++.+++++++.+.+.-++
T Consensus 362 ~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 362 RVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp HHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 355556665555554 3322 24579999998 6888999999888776543
No 143
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=38.66 E-value=21 Score=31.33 Aligned_cols=44 Identities=14% Similarity=0.114 Sum_probs=31.6
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~Gr 179 (276)
++.++|.+.+..+..| |..+|||+ ...++.|++++++.+.+.-+
T Consensus 350 ~l~~~l~~~gi~v~~~----~~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 350 EVATKCFENKLLVVPA----GNNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp HHHHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEccC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 5667776666555543 35789999 55788899999988876644
No 144
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=37.67 E-value=24 Score=32.02 Aligned_cols=46 Identities=11% Similarity=0.257 Sum_probs=33.3
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEE--EecCCcccHHHHHHHHHHHhHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRF--GMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRf--GMvT~d~DV~ELVd~I~~~GrEI 181 (276)
.++.++|.+.+..+..+ | .+||| ....++.|++++++.+.+.-+++
T Consensus 396 ~~~~~~l~~~Gv~~~~~----~-~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 443 (448)
T 3dod_A 396 YKVSLKMRELGMLTRPL----G-DVIAFLPPLASTAEELSEMVAIMKQAIHEV 443 (448)
T ss_dssp HHHHHHHHHTTEECCEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEecc----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45677777767665433 3 79999 55688899999999988775543
No 145
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=35.00 E-value=63 Score=29.63 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=52.2
Q ss_pred HHHHHhHHHHHHHHHHHhcCC---CeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCC---cc-
Q psy13413 71 DILQATVAHKASFISLVEASP---KLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSD---AA- 143 (276)
Q Consensus 71 ~iL~~TI~lr~~F~elVe~~p---sLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd---~a- 143 (276)
.++....+++++|.+.+++.+ ++.++++. ++.+|++..+. . ..++.++|.+.+ ..
T Consensus 350 ~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~~~---~~v~~~~~~~~-------~--------~~~l~~~L~~~gi~~~rv 411 (456)
T 2z67_A 350 ELVKNQKNSKKLLDELLNDLSKKTGGKFLDVE---SPIASCISVNS-------D--------PVEIAAKLYNLRVTGPRG 411 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCBCCCC---CSSEEEEECSS-------C--------HHHHHHHHHHTTEESCEE
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCCEecCCC---CeEEEEEeccc-------H--------HHHHHHHHHHcCCCcceE
Confidence 456677788899999888775 67766554 66777764322 0 223444444322 11
Q ss_pred ------eecccc--cCCceeEEEEec--CCcccHHHHHHHHHH
Q psy13413 144 ------FSLGEG--TDGLACVRFGMV--TAETDITELLSLVEE 176 (276)
Q Consensus 144 ------FssG~~--~~G~~CVRfGMv--T~d~DV~ELVd~I~~ 176 (276)
|. |.. .....+||+... +++.||+++++.+.+
T Consensus 412 ~~~~g~f~-G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~ 453 (456)
T 2z67_A 412 IKKTDHFG-NCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEK 453 (456)
T ss_dssp ECTTCHHH-HTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred EeecCccc-cccccccCcchhhhhhhcCCCHHHHHHHHHHHHH
Confidence 21 211 112357887755 688899999988754
No 146
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=34.99 E-value=33 Score=29.84 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=29.1
Q ss_pred HHHHHH-hcCCcceeccccc--------CCceeEEEEecCCcccHHHHHHHHHH
Q psy13413 132 QVVRTL-RTSDAAFSLGEGT--------DGLACVRFGMVTAETDITELLSLVEE 176 (276)
Q Consensus 132 eLl~kL-qesd~aFssG~~~--------~G~~CVRfGMvT~d~DV~ELVd~I~~ 176 (276)
++.++| ++.+..+..|..+ .+..+|||++..++.+++++++.+.+
T Consensus 340 ~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~ 393 (396)
T 3jtx_A 340 AFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAEDIVS 393 (396)
T ss_dssp HHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 345555 3445555444432 24689999998877788888877764
No 147
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=34.25 E-value=35 Score=29.80 Aligned_cols=47 Identities=17% Similarity=0.220 Sum_probs=33.9
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEE--EecCCcccHHHHHHHHHHHhHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRF--GMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRf--GMvT~d~DV~ELVd~I~~~GrEI 181 (276)
.++.++|.+.+..+..+ |..+||+ +...++.|++++++.+.+.-+++
T Consensus 352 ~~~~~~l~~~gi~v~~~----~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 400 (406)
T 4adb_A 352 KQISQEAAKAGVMVLIA----GGNVVRFAPALNVSEEEVTTGLDRFAAACEHF 400 (406)
T ss_dssp HHHHHHHHHTTEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCcEEeec----CCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35677777666665532 4689999 56688889999999888776544
No 148
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=34.10 E-value=1.1e+02 Score=26.16 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=46.8
Q ss_pred HHHHhHHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 72 iL~~TI~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
......+.++.|.+.+++.+. ..+... ..+..+++ |.. ..++.++|.+.+..+..+
T Consensus 291 ~~~~~~~~~~~l~~~L~~~~~-~~~~~~--g~~~~~~~-~~~----------------~~~~~~~l~~~gi~~~~~---- 346 (375)
T 2eh6_A 291 LLPHVREVGNYFKEKLKELGK-GKVKGR--GLMLGLEL-ERE----------------CKDYVLKALEKGLLINCT---- 346 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS-SEEEEE--TTEEEEEC-SSC----------------CHHHHHHHHHTTEECEEE----
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCceEE--EEEEEEEE-cCc----------------HHHHHHHHHHCCCEEecC----
Confidence 444555667778887776553 222211 12333332 211 135666676656555432
Q ss_pred CceeEEEEe--cCCcccHHHHHHHHHH
Q psy13413 152 GLACVRFGM--VTAETDITELLSLVEE 176 (276)
Q Consensus 152 G~~CVRfGM--vT~d~DV~ELVd~I~~ 176 (276)
+..+||++. ..++.|++++++.+.+
T Consensus 347 ~~~~iRi~~~~~~~~~~i~~~~~~l~~ 373 (375)
T 2eh6_A 347 AGKVLRFLPPLIIQKEHIDRAISVLRE 373 (375)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 467899994 5788899998888764
No 149
>2m1l_A Cyclin-dependent kinase 2-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Homo sapiens}
Probab=33.95 E-value=37 Score=25.45 Aligned_cols=40 Identities=23% Similarity=0.208 Sum_probs=33.2
Q ss_pred ccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhH
Q psy13413 165 TDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAI 204 (276)
Q Consensus 165 ~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~ 204 (276)
..-++|+..|.+.|++|.-.--...+-.|-+++||..|-.
T Consensus 15 sKY~~LL~vIeEmgkdirPTyagsks~~ERLkRgI~hAr~ 54 (69)
T 2m1l_A 15 STYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARA 54 (69)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccccchhhcCcchHHHHHHHHHHHHH
Confidence 4568999999999999987766666778899999988864
No 150
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=32.34 E-value=1.3e+02 Score=24.24 Aligned_cols=64 Identities=22% Similarity=0.144 Sum_probs=47.1
Q ss_pred CcceecccccCC-ceeEEEEe-cCCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhH
Q psy13413 141 DAAFSLGEGTDG-LACVRFGM-VTAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAI 204 (276)
Q Consensus 141 d~aFssG~~~~G-~~CVRfGM-vT~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~ 204 (276)
+.+|.-|...+. ..||-+|- +--+.+++|..+.+...-..++++.+-|+.--+-+++=|...+.
T Consensus 68 ~~~yv~g~i~~~~~V~v~lG~g~~vE~~~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~ 133 (151)
T 2zdi_C 68 AGSFLKGVIVDKNNAIVSVGSGYAVERSIDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVAR 133 (151)
T ss_dssp SSCEEEEECSCTTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCeEEEEEECCCCEEEEEeCCCeEEEecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666544 68888884 47788999999999888888888887777777666666655544
No 151
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=31.99 E-value=38 Score=30.31 Aligned_cols=49 Identities=14% Similarity=0.129 Sum_probs=34.4
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHhHH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrEIE 182 (276)
++.++|.+.+..+..+. .+..+|||+ ...++.|++++++.+.+.-++++
T Consensus 376 ~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 376 KLIYRAYQLGLVVYYVG--MNGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHHTEECEEES--TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHCCcEEeecC--CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 45666665576666442 224789996 45788899999999988776654
No 152
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=31.55 E-value=1.3e+02 Score=26.08 Aligned_cols=81 Identities=11% Similarity=0.157 Sum_probs=47.3
Q ss_pred HHhHHHHHHHHHHHhcC--CCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC
Q psy13413 74 QATVAHKASFISLVEAS--PKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD 151 (276)
Q Consensus 74 ~~TI~lr~~F~elVe~~--psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~ 151 (276)
...-+.++.|.+.+++. +.+..+... .++..+. +|.. ..++.++|.+.+..+..|
T Consensus 306 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~--g~~~~~~-~~~~----------------~~~l~~~l~~~gi~v~~~---- 362 (392)
T 3ruy_A 306 ERSLQLGEKLVGQLKEIDNPMITEVRGK--GLFIGIE-LNEP----------------ARPYCEQLKAAGLLCKET---- 362 (392)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTEEEEEEE--TTEEEEE-ESSC----------------SHHHHHHHHTTTEECCCB----
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEee--eeEEEEE-Ecch----------------HHHHHHHHHHCCcEEecC----
Confidence 33445667777777654 333333222 2344444 2320 135677787766655532
Q ss_pred CceeEEEE--ecCCcccHHHHHHHHHHH
Q psy13413 152 GLACVRFG--MVTAETDITELLSLVEET 177 (276)
Q Consensus 152 G~~CVRfG--MvT~d~DV~ELVd~I~~~ 177 (276)
+..+|||+ ...++.|++++++.+.+.
T Consensus 363 ~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 390 (392)
T 3ruy_A 363 HENVIRIAPPLVISEEDLEWAFQKIKAV 390 (392)
T ss_dssp TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 36799999 557788888888877653
No 153
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=31.43 E-value=57 Score=31.28 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=34.5
Q ss_pred HHHHHhcCCcceecccccC-CceeEEEEecC-CcccHHHHHHHHHHHhH
Q psy13413 133 VVRTLRTSDAAFSLGEGTD-GLACVRFGMVT-AETDITELLSLVEETGQ 179 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~-G~~CVRfGMvT-~d~DV~ELVd~I~~~Gr 179 (276)
+.+.|.+.+.+..-|..++ +..|||++... ++.+++++++.+.+.-+
T Consensus 472 l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~ 520 (546)
T 2zy4_A 472 LFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMAD 520 (546)
T ss_dssp HHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 5566677777777776664 35799999996 67788888888876643
No 154
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=31.31 E-value=90 Score=27.85 Aligned_cols=43 Identities=12% Similarity=0.202 Sum_probs=31.3
Q ss_pred HHHHHhcCCcceecccccCCceeEEE--EecCCcccHHHHHHHHHHHhH
Q psy13413 133 VVRTLRTSDAAFSLGEGTDGLACVRF--GMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~G~~CVRf--GMvT~d~DV~ELVd~I~~~Gr 179 (276)
+.++|.+.+..+..+ |..+||| +...++.|++++++.+.+.-+
T Consensus 372 ~~~~l~~~Gv~v~~~----~~~~lRis~~~~~t~e~i~~~l~~l~~~l~ 416 (419)
T 2eo5_A 372 IIGESFKRGLLLLPA----GRSAIRVIPPLVISEEEAKQGLDILKKVIK 416 (419)
T ss_dssp HHHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 667776667666543 2568999 557889999999998876543
No 155
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=30.98 E-value=1.6e+02 Score=26.11 Aligned_cols=49 Identities=10% Similarity=0.068 Sum_probs=30.4
Q ss_pred HHHHHHHhcCCcceeccc-cc--CCceeEEEEec--CCcccHHHHHHHHHHHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGE-GT--DGLACVRFGMV--TAETDITELLSLVEETGQ 179 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~-~~--~G~~CVRfGMv--T~d~DV~ELVd~I~~~Gr 179 (276)
.++.++|.+.+..+..+. .. .+..+|||..- .++.+++++++.+.+.-+
T Consensus 373 ~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 426 (430)
T 3i4j_A 373 SRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALE 426 (430)
T ss_dssp HHHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 457777776665554331 11 23578999864 788899999988877644
No 156
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=30.60 E-value=38 Score=29.31 Aligned_cols=46 Identities=22% Similarity=0.251 Sum_probs=29.9
Q ss_pred HHHHHHh-cCCcceecccccC--CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 132 QVVRTLR-TSDAAFSLGEGTD--GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 132 eLl~kLq-esd~aFssG~~~~--G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
++.++|. +.+.....|..+. +..++|++..+++.+++++++.+.+.
T Consensus 319 ~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~ 367 (370)
T 2z61_A 319 EFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEF 367 (370)
T ss_dssp HHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 4566664 4455555444332 46799999997777777777766543
No 157
>2o99_A Acetate operon repressor; ICLR, DNA binding protein; HET: MSE; 1.70A {Escherichia coli} SCOP: d.110.2.2 PDB: 2o9a_A 1td5_A
Probab=30.31 E-value=1.6e+02 Score=23.61 Aligned_cols=52 Identities=17% Similarity=0.294 Sum_probs=37.2
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHhH
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEESW 185 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEess 185 (276)
+++.++.+-++..++...|..||-+-+. + ++.++++++..+.+++++|+...
T Consensus 107 l~~iR~~Gya~~~~e~~~gv~~iAaPv~~~~g~~~aalsv~~p~~r~~~~~~~~~~~~l~~aa~~is~~l 176 (182)
T 2o99_A 107 LAQTRKRGYSFDDEEHALGLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAY 176 (182)
T ss_dssp HHHHHHHTSEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEETTTSCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEeccccccCCEEEEEEEECCCCCEEEEEEEEeehHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455667888888887777777654332 2 23467899999999999998654
No 158
>1tf1_A Negative regulator of allantoin and glyoxylate utilization operons; midwest center for structural genomics, GLCR, ligand binding domain; 1.80A {Escherichia coli} SCOP: d.110.2.2
Probab=30.12 E-value=1.3e+02 Score=24.68 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=36.6
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHhH
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEESW 185 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEess 185 (276)
+++.++.+-++..++...|..||-+-+. + ++.++++++..+.+++++|+...
T Consensus 123 l~~iR~~Gya~~~~e~~~gv~~iAaPI~~~~g~~~aalsvs~p~~r~~~~~~~~~~~~l~~aA~~Is~~l 192 (198)
T 1tf1_A 123 LEQARELGYTVDKEEHVVGLNCIASAIYDDVGSVVAAISISGPSSRLTEDRFVSQGELVRDTARDISTAL 192 (198)
T ss_dssp HHHHHHHTCEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEETTTSCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEeccccccCceEEEEEEECCCCCEEEEEEEeeehHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444557888888887788777754332 2 23467899999999999988653
No 159
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=29.78 E-value=51 Score=29.22 Aligned_cols=92 Identities=9% Similarity=0.096 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCeeeecCCCCce-EEEEeecCCCCCCCC-ch-HHHHHHHHHHHHHHHHHh-cCCcceecccccC--
Q psy13413 78 AHKASFISLVEASPKLTLVDMPGWAG-LGGVRYVPPAWGATD-TD-QAKAELNRLNIQVVRTLR-TSDAAFSLGEGTD-- 151 (276)
Q Consensus 78 ~lr~~F~elVe~~psLelVe~~~waG-LG~VRYvP~~w~~~~-~d-~~k~ELnKLN~eLl~kLq-esd~aFssG~~~~-- 151 (276)
+.++.|.+.+++. ++.++.+. +| ...+++ |....... .+ ..... ..++.++|. +.+..+..|..+.
T Consensus 323 ~~~~~l~~~L~~~-g~~~~~~~--~g~~~~~~~-~~~~~~~~~~~~~~~~~----~~~l~~~l~~~~gv~v~~g~~f~~~ 394 (429)
T 1yiz_A 323 AKRDYMASFLAEV-GMNPTVPQ--GGYFMVADW-SSLDSKVDLTQETDARK----DYRFTKWMTKSVGLQGIPPSAFYSE 394 (429)
T ss_dssp HHHHHHHHHHHHH-TCEEEECS--BSSEEEEEC-CSSCTTTTCCSSSSSCH----HHHHHHHHHHHTSEECBCGGGGSCG
T ss_pred HHHHHHHHHHHhC-CCcccCCC--cceEEEEEc-ccccccccccccccCCC----HHHHHHHHHHhCCEEEeCchHhCCC
Confidence 3455677777765 67766443 23 445554 32200000 00 00001 124555553 4455554443322
Q ss_pred -----CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 152 -----GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 152 -----G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
+..+|||+...++.||+++++.+.+.
T Consensus 395 ~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~ 425 (429)
T 1yiz_A 395 PNKHLGEDFVRYCFFKKDENLQKAAEILRKW 425 (429)
T ss_dssp GGGGGTTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred cccCCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 35799999998888888888877654
No 160
>3ka1_A RBCX protein; chaperone, helix bundle, rubisco assembly; 1.71A {Thermosynechococcus elongatus bp-1} PDB: 3q20_A
Probab=29.56 E-value=77 Score=26.14 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=34.3
Q ss_pred eec-ccccCCc-eeEEEEecCCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhHh
Q psy13413 144 FSL-GEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAID 205 (276)
Q Consensus 144 Fss-G~~~~G~-~CVRfGMvT~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~d 205 (276)
|+. ++..||. +|-. +..+. .+|...|.+.=.-+-+ ...|.+-||+++||++++.+
T Consensus 44 F~~~~~~~DGe~fl~~--L~~E~---~~LA~RIM~vR~hla~--~v~d~l~eMv~~~I~q~N~e 100 (126)
T 3ka1_A 44 FTSQESIQDGERYLEA--LFREQ---PDLGFRILTVREHLAE--MVADYLPEMLRAGIQQANLQ 100 (126)
T ss_dssp HHHHHCSSCHHHHHHH--HHHHC---HHHHHHHHHHHHHHHH--HHGGGHHHHHHHHHHHHHHH
T ss_pred HHHcCCCccHHHHHHH--HHhhC---HHHHHHHHHHHHHHHH--HHHHHhHHHHHHHHHHHHHH
Confidence 655 5556774 4322 22223 3555555555334443 26788999999999999998
No 161
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=29.45 E-value=61 Score=29.69 Aligned_cols=49 Identities=6% Similarity=-0.018 Sum_probs=32.7
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEEe--cCCcccHHHHHHHHHHHhHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFGM--VTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfGM--vT~d~DV~ELVd~I~~~GrEI 181 (276)
.++.++|.+.+..+..+..+ ..++||.. ..++.|++++++.+.+.-+++
T Consensus 399 ~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 449 (453)
T 4ffc_A 399 KSIAAEALSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGITALSDIIRAK 449 (453)
T ss_dssp HHHHHHHHHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45666777767666543222 26888863 468889999999887765543
No 162
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=28.91 E-value=1.1e+02 Score=22.09 Aligned_cols=34 Identities=12% Similarity=0.100 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHH
Q psy13413 167 ITELLSLVEETGQQEEESWKFIDSMAEIHHSPRR 200 (276)
Q Consensus 167 V~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~ 200 (276)
|.+|-.-.....+-+|+.++.=-.|.++|||-|.
T Consensus 19 V~eL~qe~k~m~k~lEeEqkARk~LE~~vrk~~k 52 (56)
T 2w6b_A 19 VQELRQDNKKMKKSLEEEQRARKDLEKLVRKVLK 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444455555555555566666666553
No 163
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=28.84 E-value=3.8e+02 Score=25.45 Aligned_cols=89 Identities=16% Similarity=0.125 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhcCCCeeeecCCCCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceecccccC-----
Q psy13413 77 VAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGTD----- 151 (276)
Q Consensus 77 I~lr~~F~elVe~~psLelVe~~~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~~----- 151 (276)
.+.++.|.+.+.+. ++.++....=.-+..|..-+.+. ... ++.+.|++.+.....+....
T Consensus 341 ~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~-------~~~-------~~~~~L~~~GI~v~~~~~p~d~~p~ 405 (490)
T 2a7v_A 341 LKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGL-------DGA-------RAERVLELVSITANKNTCPGDRSAI 405 (490)
T ss_dssp HHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTC-------CHH-------HHHHHHHHTTEECEEECCTTCCCSS
T ss_pred HHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCC-------CHH-------HHHHHHHhCCeEEecCccCCCCCCC
Confidence 34456666666653 88887532112455565544331 111 23445666555555443222
Q ss_pred CceeEEEEec--C----CcccHHHHHHHHHHHhHh
Q psy13413 152 GLACVRFGMV--T----AETDITELLSLVEETGQQ 180 (276)
Q Consensus 152 G~~CVRfGMv--T----~d~DV~ELVd~I~~~GrE 180 (276)
....||+|.. | .+.|++++.+.|.+.-+.
T Consensus 406 ~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 2367999983 3 567898888888766543
No 164
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=28.21 E-value=2.5e+02 Score=24.78 Aligned_cols=23 Identities=13% Similarity=0.355 Sum_probs=14.3
Q ss_pred HHHhHHHHHHHHHHHhcCCCeee
Q psy13413 73 LQATVAHKASFISLVEASPKLTL 95 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLel 95 (276)
+....+.++.+.+.+++.|.++-
T Consensus 266 ~~~~~~~~~~l~~~L~~~~~v~~ 288 (398)
T 1gc0_A 266 MDRHCANAQVLAEFLARQPQVEL 288 (398)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeeE
Confidence 34445556677777777776553
No 165
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=27.74 E-value=39 Score=29.84 Aligned_cols=45 Identities=9% Similarity=0.070 Sum_probs=32.5
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEEec-CCcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFGMV-TAETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfGMv-T~d~DV~ELVd~I~~~GrEI 181 (276)
++.+.|.+.+.....| ..+|||++. .++.+++++++.+.+.-+++
T Consensus 370 ~~~~~l~~~gi~v~~g-----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 370 AICEELKKEHIYVIAL-----ANGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp HHHHHHHHTTEECEEC-----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred HHHHHHHhCCEEEecC-----CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 4566677767666654 357999987 48889999999888765543
No 166
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=26.63 E-value=2.1e+02 Score=25.17 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=14.3
Q ss_pred ceeEEEEecC--CcccHHHHHHHHH
Q psy13413 153 LACVRFGMVT--AETDITELLSLVE 175 (276)
Q Consensus 153 ~~CVRfGMvT--~d~DV~ELVd~I~ 175 (276)
..+|||..-. .+.+|+.|++.+.
T Consensus 370 ~~~iRls~~~~~~~~~i~~l~~al~ 394 (398)
T 2rfv_A 370 DGLIRLSVGLEDPEDIINDLEHAIR 394 (398)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCHHHHHHHHHHHHH
Confidence 5789999874 3445555555444
No 167
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=26.15 E-value=3.3e+02 Score=23.87 Aligned_cols=27 Identities=11% Similarity=0.191 Sum_probs=22.1
Q ss_pred eeEEEEec--C-CcccHHHHHHHHHHHhHh
Q psy13413 154 ACVRFGMV--T-AETDITELLSLVEETGQQ 180 (276)
Q Consensus 154 ~CVRfGMv--T-~d~DV~ELVd~I~~~GrE 180 (276)
.+||+.+- . ++.||+.+++.+.+..++
T Consensus 384 ~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 384 QSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp HEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 58999986 5 888999999998876554
No 168
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=26.02 E-value=61 Score=29.15 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=31.8
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~Gr 179 (276)
++.++|.+.+..+..+ |..+|||+ ...++.|++++++.+.+.-+
T Consensus 371 ~l~~~l~~~Gi~v~~~----~~~~iRl~~~~~~t~eei~~~~~~l~~~l~ 416 (420)
T 2pb2_A 371 DFLYAGAEAGVMVLNA----GADVMRFAPSLVVEEADIHEGMQRFAQAVG 416 (420)
T ss_dssp HHHHHHHHTTEECEES----STTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEeC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 5667776666555533 35689999 56888899999998876644
No 169
>3hyb_A RBCX protein; rubisco, protein complex assembly, chaperone; HET: SO4; 2.30A {Anabaena SP} PDB: 2wvw_I 2peo_A* 3rg6_C
Probab=25.96 E-value=93 Score=26.52 Aligned_cols=55 Identities=15% Similarity=0.205 Sum_probs=32.9
Q ss_pred eecccccCCc-eeEEEEecCCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhHh
Q psy13413 144 FSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAID 205 (276)
Q Consensus 144 FssG~~~~G~-~CVRfGMvT~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~d 205 (276)
|+.+...||. +|-. +..+. .+|...|.++=.-+-+ ...|.+-||+++||++++.+
T Consensus 64 F~s~~iqDGe~fl~~--L~~E~---~~LA~RIM~VRehlae--~v~eflpeMv~~~IqqaN~e 119 (155)
T 3hyb_A 64 FSAGKVQDGEKYIEE--LFLEK---PDLALRIMTVREHIAE--EIAEFLPEMVVTGIQQANME 119 (155)
T ss_dssp HHTTCCSSHHHHHHH--HHHHC---HHHHHHHHHHHHHHHH--HHGGGHHHHHHHHHHHHHHH
T ss_pred HHcCCcccHHHHHHH--HHhhC---HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 6665556663 3321 11222 3455555544333333 26777899999999999998
No 170
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=25.95 E-value=61 Score=28.89 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=34.3
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEEecCCcccHHHHHHHHHHHhHhHH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFGMVTAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEIE 182 (276)
.++.++|.+.+..+..+ |..++|+....++.|++++++.+.+.-+++.
T Consensus 384 ~~~~~~l~~~Gv~v~~~----~~~~~rl~~~~t~e~i~~~l~~l~~~l~~~~ 431 (434)
T 3l44_A 384 GKFFKLMLQEGVNLAPS----KYEAWFLTTEHTKEDIEYTIEAVGRAFAALA 431 (434)
T ss_dssp HHHHHHHHHTTEECCSS----TTCCEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEeec----CCCcEEEecccCHHHHHHHHHHHHHHHHHHH
Confidence 45667777667666533 3356888777889999999999887766543
No 171
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=25.66 E-value=49 Score=30.06 Aligned_cols=45 Identities=9% Similarity=0.092 Sum_probs=32.1
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhHh
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~GrE 180 (276)
++.++|.+.+..+..+ |..+|||. ...++.|++++++.+.+.-++
T Consensus 382 ~~~~~l~~~Gv~v~~~----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 382 DICLKLKENGLITRDV----HDKTIRLTPPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp HHHHHHHHTTEECCEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCeEEecC----CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 5777777666555432 46789995 457889999999988776544
No 172
>2k9i_A Plasmid PRN1, complete sequence; plasmid COPY control protein, ribbon helix helix protein, DNA binding protein; NMR {Sulfolobus islandicus} PDB: 3ft7_A
Probab=25.44 E-value=59 Score=21.15 Aligned_cols=14 Identities=0% Similarity=0.076 Sum_probs=12.0
Q ss_pred HHHHHhhhhHHHhh
Q psy13413 190 SMAEIHHSPRRLTA 203 (276)
Q Consensus 190 ~MtE~vrKGI~~A~ 203 (276)
+++|+||++|++.-
T Consensus 34 s~s~~ir~ai~~~l 47 (55)
T 2k9i_A 34 TLSDVCRLAIKEYL 47 (55)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH
Confidence 89999999998754
No 173
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=25.43 E-value=1.6e+02 Score=25.32 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=36.4
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec------------------CCcccHHHHHHHHHHHhHhHHHh
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV------------------TAETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv------------------T~d~DV~ELVd~I~~~GrEIEes 184 (276)
+++.++.+-++..++...|..||-+-+. -++.++++++..+.+++++|+..
T Consensus 186 l~~iR~~Gya~~~~e~~~g~~~vAaPI~~~~g~~~aalsvs~p~~r~~~~~~~~~~~~l~~aA~~Is~~ 254 (260)
T 2o0y_A 186 VEDGRERGYQLVHGERELGSSGLSFPLVDSHGTVVAALTLGGPTGRFTEDRTPHYIECTRAAAEEISAI 254 (260)
T ss_dssp HHHHHHHSSEEEESSSSTTEEEEEEEEECTTCCEEEEEEEEEEGGGSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCeEEecccccCCceEEEEEEECCCCCEEEEEEEEeehHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445557888888887788777753321 23446889999999999998864
No 174
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=24.94 E-value=36 Score=30.68 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=31.7
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEE--ecCCcccHHHHHHHHHHHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFG--MVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfG--MvT~d~DV~ELVd~I~~~Gr 179 (276)
++.++|.+.+..+..+ | .+|||+ ...++.|++++++.+.+.-+
T Consensus 401 ~~~~~l~~~Gv~v~~~----g-~~iRis~~~~~t~~~i~~~l~~l~~~l~ 445 (449)
T 3a8u_X 401 EAGMALWKAGFYVRFG----G-DTLQFGPTFNSKPQDLDRLFDAVGEVLN 445 (449)
T ss_dssp HHHHHHHHHTEECEEE----T-TEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecC----C-CEEEEECCCcCCHHHHHHHHHHHHHHHH
Confidence 3667776656665543 3 789999 67889999999998877644
No 175
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=24.64 E-value=1.2e+02 Score=26.52 Aligned_cols=54 Identities=15% Similarity=0.248 Sum_probs=38.8
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHhHHH
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEESWKF 187 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEessk~ 187 (276)
+++.++.+-+++-++...|..||-+-+. + ++..++++++.+.+++++|+...-+
T Consensus 199 l~~iR~~Gya~~~~E~~~gv~~vAaPV~~~~g~~~aalsvs~p~~r~~~~~~~~~~~~l~~aA~~Is~~lg~ 270 (275)
T 3mq0_A 199 LALTRARGYSIDDGQIREGMLCIGAAIRDYSGAASAGIAISLIRSEASDEKIAYLGEELRTTANALSEKLGY 270 (275)
T ss_dssp HHHHHHHTSEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEETTSCCTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCeEEeCcccccCcEEEEEEEECCCCCEEEEEEEEEEhhhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4455667888888887777777754332 2 2335799999999999999876544
No 176
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=24.62 E-value=61 Score=25.64 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHhcCCcceecccccCCceeEEEEecCCcccHHHHHHHHHHHhHh
Q psy13413 124 AELNRLNIQVVRTLRTSDAAFSLGEGTDGLACVRFGMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 124 ~ELnKLN~eLl~kLqesd~aFssG~~~~G~~CVRfGMvT~d~DV~ELVd~I~~~GrE 180 (276)
.+++.|-.+|-+|+.++..-|. +.-.-|-++-+.++.|+.+|++.+.+.|-.
T Consensus 25 ~d~~~l~~~L~~ki~~aP~FF~-----~aPVVlDl~~l~~~~dl~~L~~~l~~~gl~ 76 (120)
T 3ghf_A 25 AEPEVIRQALEDKIAQAPAFLK-----HAPVVINVSGLESPVNWPELHKIVTSTGLR 76 (120)
T ss_dssp CCHHHHHHHHHHHHHHSHHHHT-----TCEEEEEEEECCSSCCHHHHHHHHHTTTCE
T ss_pred CCHHHHHHHHHHHHHhChHhhC-----CCcEEEEccccCChHHHHHHHHHHHHcCCE
Confidence 4678899999999988875554 224566777776778999999999888653
No 177
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=24.52 E-value=62 Score=29.54 Aligned_cols=45 Identities=18% Similarity=0.265 Sum_probs=32.5
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEE--EecCCcccHHHHHHHHHHHhH
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRF--GMVTAETDITELLSLVEETGQ 179 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRf--GMvT~d~DV~ELVd~I~~~Gr 179 (276)
.++.++|.+.+..+..+ |..+||| ....++.||+++++.+.+.-+
T Consensus 400 ~~~~~~l~~~Gv~v~~~----g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 446 (449)
T 2cjg_A 400 DELIRQLWQRAVIVLPA----GADTVRFRPPLTVSTAEIDAAIAAVRSALP 446 (449)
T ss_dssp HHHHHHHHHTTEECEEE----TTTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCeEEecC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 35777776666555533 4579999 556889999999998876644
No 178
>3ih6_A Putative zinc protease; bordetella pertussis tohama I, struc genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 2.15A {Bordetella pertussis} PDB: 3ivl_A
Probab=24.40 E-value=1.7e+02 Score=22.88 Aligned_cols=49 Identities=16% Similarity=0.063 Sum_probs=27.0
Q ss_pred HHHHHHhcCCcceecccc-----cCCceeEEEEecCCcccHHHHHHHHHHHhHhH
Q psy13413 132 QVVRTLRTSDAAFSLGEG-----TDGLACVRFGMVTAETDITELLSLVEETGQQE 181 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~-----~~G~~CVRfGMvT~d~DV~ELVd~I~~~GrEI 181 (276)
-|-+.|++.+.+++.+.. ..|.+.|.++.- .+.+++++++.|.+.-+++
T Consensus 58 rL~~~lre~gl~y~~~~~~~~~~~~g~~~i~~~~~-~~~~~~~~~~~i~~~l~~l 111 (197)
T 3ih6_A 58 RLYHALVPTKLASGVFGFTMDQLDPGLAMFGAQLQ-PGMDQDKALQTLTATLESL 111 (197)
T ss_dssp HHHHHHTTTTSCSEEEEEEETTSSSCEEEEEEECC-TTSCHHHHHHHHHHHHHCT
T ss_pred hHHHHHHhcCceEEEEeccccccCCeEEEEEEEEC-CCCCHHHHHHHHHHHHHHH
Confidence 455667665555444332 234455444332 2347888888877665544
No 179
>1ysq_A HTH-type transcriptional regulator YIAJ; YAIJ, ICLR, structural genomics, protein structure initiative, midwest center for structural genomics; 1.75A {Escherichia coli}
Probab=24.31 E-value=1.2e+02 Score=24.47 Aligned_cols=54 Identities=22% Similarity=0.309 Sum_probs=38.6
Q ss_pred HHHHHhcCCcceecccccCCceeEEEEecC------------------CcccHHHHHHHHHHHhHhHHHhHH
Q psy13413 133 VVRTLRTSDAAFSLGEGTDGLACVRFGMVT------------------AETDITELLSLVEETGQQEEESWK 186 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~G~~CVRfGMvT------------------~d~DV~ELVd~I~~~GrEIEessk 186 (276)
-+++.++.+-++..++...|..||-+-+.. ++.++++++..+.+.+++|+....
T Consensus 110 ~l~~iR~~Gya~~~~e~~~gv~~iAaPI~~~~g~~~aalsv~~p~~r~~~~~~~~~~~~l~~aA~~Is~~lg 181 (193)
T 1ysq_A 110 ELAHIRESGAAMDREENELGVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELG 181 (193)
T ss_dssp HHHHHHHHTCEEEESSSSTTEEEEEEEECCTTSCCSEEEEEEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcEEeccccccCCEEEEEEEECCCCCEEEEEEEEEEhHHcCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345566678888888888888888664431 123467889999999999886544
No 180
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=24.03 E-value=76 Score=23.51 Aligned_cols=39 Identities=21% Similarity=0.158 Sum_probs=31.7
Q ss_pred cHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHHHhhH
Q psy13413 166 DITELLSLVEETGQQEEESWKFIDSMAEIHHSPRRLTAI 204 (276)
Q Consensus 166 DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~~A~~ 204 (276)
.-++|+..|.+.|++|--.---.-+=.|-+++||..|-.
T Consensus 12 kY~~LL~VIeEmgkdIrpTYaGsk~~~ERLkR~I~hAr~ 50 (65)
T 2kw6_A 12 KYAELLAIIEELGKEIRPTYAGSKSAMERLKRGIIHARG 50 (65)
T ss_dssp HHHHHHHHHHHHTTTHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccchhhccCcchHHHHHHHHHHHHH
Confidence 457899999999999987655566678889999988865
No 181
>2x7r_B Transmembrane protein GP41; envelope glycoprotein, membrane anchored fusion protein, viral protein; 2.00A {Human immunodeficiency virus type 1LW12}
Probab=23.87 E-value=46 Score=24.10 Aligned_cols=39 Identities=21% Similarity=0.255 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHhhhhHHHhhHh------hhceecceeecCceeeecCC
Q psy13413 184 SWKFIDSMAEIHHSPRRLTAID------YVWTQLKVFVQCSLVNWWSP 225 (276)
Q Consensus 184 ssk~Le~MtE~vrKGI~~A~~d------~l~RqvPvv~~gSvvNW~SP 225 (276)
.-|-+++.+..|-.-|++||.+ .|+ .+=-- +|+.|||.-
T Consensus 11 WekeI~nyt~~Iy~LLe~sq~qqekNe~~Ll-~Ld~W--~~lwnWf~i 55 (63)
T 2x7r_B 11 WDREINNYTSLIHSLIEESQNQQEKNEQELL-ELDKW--ASLWNWFNI 55 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHC------------
T ss_pred HHHHHHHhhHHHHHHHHHHHhhHHHHHHHHH-HHHHH--hHHHHHhhh
Confidence 3466788899999999999876 233 22344 788999954
No 182
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=29.58 E-value=17 Score=32.08 Aligned_cols=46 Identities=11% Similarity=0.188 Sum_probs=31.7
Q ss_pred HHHHHHh-cCCcceecccccC--CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 132 QVVRTLR-TSDAAFSLGEGTD--GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 132 eLl~kLq-esd~aFssG~~~~--G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
++.++|. +.+..+..|..+. +..+||+++...+.+++++++.+.+.
T Consensus 341 ~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 341 ALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCC 389 (392)
Confidence 5666674 5566665555443 56899999888777888888776543
No 183
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=23.49 E-value=86 Score=26.90 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=21.6
Q ss_pred eeEEEEec--CCcccHHHHHHHHHHHhHh
Q psy13413 154 ACVRFGMV--TAETDITELLSLVEETGQQ 180 (276)
Q Consensus 154 ~CVRfGMv--T~d~DV~ELVd~I~~~GrE 180 (276)
.+||+.+- .++.||+.+++.|.+..++
T Consensus 342 ~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 342 AVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred CEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 78998766 7888999999998876543
No 184
>1ysp_A Transcriptional regulator KDGR; ICLR, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Escherichia coli}
Probab=23.09 E-value=1.6e+02 Score=23.45 Aligned_cols=53 Identities=17% Similarity=0.326 Sum_probs=36.6
Q ss_pred HHHHHhcCCcceecccccCCceeEEEEec---------------CC---cccHHHHHHHHHHHhHhHHHhH
Q psy13413 133 VVRTLRTSDAAFSLGEGTDGLACVRFGMV---------------TA---ETDITELLSLVEETGQQEEESW 185 (276)
Q Consensus 133 Ll~kLqesd~aFssG~~~~G~~CVRfGMv---------------T~---d~DV~ELVd~I~~~GrEIEess 185 (276)
-+++.++.+-++..++...|..||-+-+. +. +.++++++..+.+.+++|+...
T Consensus 102 ~l~~iR~~Gya~~~~e~~~g~~~vAaPv~~~~g~~~~alsv~~p~~r~~~~~~~~~~~~l~~aA~~is~~l 172 (181)
T 1ysp_A 102 VLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQM 172 (181)
T ss_dssp HHHHHHHHTCEEEESSSSTTBEEEEEEEECTTSCEEEEEEECCBSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEccccccCCEEEEEEEECCCCCEEEEEEEEeehHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555667888888887788777754332 22 2356788999999999887643
No 185
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=22.79 E-value=98 Score=28.22 Aligned_cols=46 Identities=15% Similarity=0.024 Sum_probs=31.0
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEEEe--cCCcccHHHHHHHHHHHh
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRFGM--VTAETDITELLSLVEETG 178 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRfGM--vT~d~DV~ELVd~I~~~G 178 (276)
.++.++|.+.+..+..+..+ ..++||.. ..++.|++++++.+.+.-
T Consensus 401 ~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l~~l~~~l 448 (451)
T 3oks_A 401 KALCAGAHAAGVIVLSCGTY--GNVVRFLPPLSIGDDLLNEGLDVLEEVL 448 (451)
T ss_dssp HHHHHHHHHTTEECEEECTT--SCEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCcEEecCCCC--CCEEEEECCCCCCHHHHHHHHHHHHHHH
Confidence 45677777777766543222 26888863 467889999988887653
No 186
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=22.78 E-value=1.2e+02 Score=26.99 Aligned_cols=27 Identities=15% Similarity=0.082 Sum_probs=20.7
Q ss_pred ceeEEEEec---CCcccHHHHHHHHHHHhH
Q psy13413 153 LACVRFGMV---TAETDITELLSLVEETGQ 179 (276)
Q Consensus 153 ~~CVRfGMv---T~d~DV~ELVd~I~~~Gr 179 (276)
..+|||+.- .++.|++++++.+.+..+
T Consensus 400 ~~~iRis~~~~~~t~e~i~~~~~~l~~~l~ 429 (456)
T 2ez2_A 400 LETVRLTIPRRVYTYAHMDVVADGIIKLYQ 429 (456)
T ss_dssp CCEEEEECCTTTCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 478999987 678888888887766543
No 187
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=22.77 E-value=2.3e+02 Score=26.00 Aligned_cols=90 Identities=6% Similarity=-0.109 Sum_probs=50.0
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeecCC-CCceEEEEeecCCCCCCCCchHHHHHHHHHHHHHHHHHhcCCcceeccccc-
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVDMP-GWAGLGGVRYVPPAWGATDTDQAKAELNRLNIQVVRTLRTSDAAFSLGEGT- 150 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe~~-~waGLG~VRYvP~~w~~~~~d~~k~ELnKLN~eLl~kLqesd~aFssG~~~- 150 (276)
.....+.+++|.+.+++. +++++... .+ ....+++ +.+ .. ..++.++|.+.+.... +..+
T Consensus 346 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~~~~~~~-~~~-------~~-------~~~l~~~L~~~Gi~~~-~~~~~ 407 (474)
T 1wyu_B 346 AALAVLNARYLKELLKEK-GYRVPYDGPSM-HEFVAQP-PEG-------FR-------ALDLAKGLLELGFHPP-TVYFP 407 (474)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCBCSSCSSCC-SCEEEBC-STT-------CC-------HHHHHHHHHHTTCCCC-EESCS
T ss_pred HHHHHHHHHHHHHHHhhc-CcEecCCCCcc-eEEEEEc-CCC-------CC-------HHHHHHHHHHCCcccc-ccccc
Confidence 344556778888888876 77763222 12 1123333 222 00 1245556655444322 2112
Q ss_pred -CCceeEEEEecC--CcccHHHHHHHHHHHhHh
Q psy13413 151 -DGLACVRFGMVT--AETDITELLSLVEETGQQ 180 (276)
Q Consensus 151 -~G~~CVRfGMvT--~d~DV~ELVd~I~~~GrE 180 (276)
.+..+|||+... ++.|++++++.+.+..++
T Consensus 408 ~~~~~~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 408 LIVKEALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp TTSTTCEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred cccCCEEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 125789999874 677899998888776544
No 188
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=22.55 E-value=57 Score=30.29 Aligned_cols=46 Identities=13% Similarity=0.204 Sum_probs=32.9
Q ss_pred HHHHHHHhcCCcceecccccCCceeEEE--EecCCcccHHHHHHHHHHHhHh
Q psy13413 131 IQVVRTLRTSDAAFSLGEGTDGLACVRF--GMVTAETDITELLSLVEETGQQ 180 (276)
Q Consensus 131 ~eLl~kLqesd~aFssG~~~~G~~CVRf--GMvT~d~DV~ELVd~I~~~GrE 180 (276)
.+++++|.+.+..+.. .|..+||| +...++.||+++++.+.+.-++
T Consensus 423 ~~~~~~l~~~Gv~~~~----~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 423 NKLISIARNKGVMLGG----CGDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHTTEECEE----ETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCeEEec----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 4577777665555442 24679999 6678999999999988766443
No 189
>3a69_A Flagellar HOOK protein FLGE; the bacterial flagellar motor, universal joint, bacterial flagellum, motor protein; 7.10A {Salmonella enterica subsp}
Probab=22.09 E-value=1.2e+02 Score=28.88 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=32.9
Q ss_pred ceeEEEEec--CCcccHHHHHHHHHHHhHhHHHhHHHHHHHHHHhhhhHH
Q psy13413 153 LACVRFGMV--TAETDITELLSLVEETGQQEEESWKFIDSMAEIHHSPRR 200 (276)
Q Consensus 153 ~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIEessk~Le~MtE~vrKGI~ 200 (276)
.--|+=|++ +.-.=++|++++|..- |-.|.++|.++...||.++.|.
T Consensus 352 ~G~i~~g~lE~SNV~~~~Em~~mi~~q-R~yean~k~i~t~d~m~~~~~~ 400 (402)
T 3a69_A 352 FGKLTNGALEASNVDLSKELVNMIVAQ-RNYQSNAQTIKTQDQILNTLVN 400 (402)
T ss_dssp BCCCCC---------CHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhheecCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 345777777 3344567888887665 9999999999999999998775
No 190
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=21.95 E-value=1.3e+02 Score=20.86 Aligned_cols=26 Identities=23% Similarity=0.362 Sum_probs=20.6
Q ss_pred HHHHHHHHhHhHHHhHHHHHHHHHHh
Q psy13413 170 LLSLVEETGQQEEESWKFIDSMAEIH 195 (276)
Q Consensus 170 LVd~I~~~GrEIEessk~Le~MtE~v 195 (276)
|=++=.+.|.||++..++|+.|.+-+
T Consensus 21 lk~~a~~Ig~El~~Qn~lLd~l~~~~ 46 (65)
T 1gl2_D 21 QKQMGQEIGNELDEQNEIIDDLANLV 46 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33444578999999999999998765
No 191
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=21.57 E-value=1.5e+02 Score=25.51 Aligned_cols=51 Identities=14% Similarity=0.147 Sum_probs=35.6
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHh
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEes 184 (276)
+++.++.+-+++.++...|..||-+-+. + ++..++++++.+.+++++|+..
T Consensus 177 l~~iR~~Gya~~~~e~~~g~~~iAaPI~~~~g~~~aalsvs~p~~r~~~~~~~~~~~~l~~aA~~Is~~ 245 (260)
T 3r4k_A 177 IAEVRRTGLAQSIGGFEAEVHSHAVPIFGPDRAVLGALAVAAPTSRMTPDQKRTIPPALRAAGLSLTER 245 (260)
T ss_dssp HHHHHHHSCEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeCCccccCceEEEEEEECCCCCEEEEEEEEEehHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445557888888887788777765443 2 2234678899999999988764
No 192
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=20.93 E-value=1.6e+02 Score=24.95 Aligned_cols=51 Identities=20% Similarity=0.342 Sum_probs=35.7
Q ss_pred HHHHhcCCcceecccccCCceeEEEEec---------------C---CcccHHHHHHHHHHHhHhHHHh
Q psy13413 134 VRTLRTSDAAFSLGEGTDGLACVRFGMV---------------T---AETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 134 l~kLqesd~aFssG~~~~G~~CVRfGMv---------------T---~d~DV~ELVd~I~~~GrEIEes 184 (276)
+++.++.+-++..++...|..||-+-+. + ++.+++++++.+.+++++|+..
T Consensus 178 l~~iR~~Gya~~~~e~~~g~~~iAaPI~~~~g~~~aalsv~~p~~r~~~~~~~~~~~~l~~aa~~is~~ 246 (249)
T 1mkm_A 178 LEKIRKRGYAVDNEENEIGIMCVGVPIFDHNGYPVAGVSISGVARKFTEEKIEEYSDVLKEKAEEISRK 246 (249)
T ss_dssp HHHHHHHSSEEEESSSSTTEEEEEEEEECTTSCEEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcccccccccCCEEEEEEEECCCCCEEEEEEEEEEhHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 3445557888888887888888754332 2 2335678999999999998764
No 193
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=20.67 E-value=1e+02 Score=29.14 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=34.5
Q ss_pred HHHHHH-hcCCcceecccccC-CceeEEEEec-CCcccHHHHHHHHHHHhHhHH
Q psy13413 132 QVVRTL-RTSDAAFSLGEGTD-GLACVRFGMV-TAETDITELLSLVEETGQQEE 182 (276)
Q Consensus 132 eLl~kL-qesd~aFssG~~~~-G~~CVRfGMv-T~d~DV~ELVd~I~~~GrEIE 182 (276)
+++.+| ++.+..+..|..+. +..+||+++. .++.|++++++.+.+..+++.
T Consensus 473 ~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~ 526 (533)
T 3f6t_A 473 DFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYY 526 (533)
T ss_dssp HHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHH
Confidence 455554 45566666555432 3679999998 367799999998887766543
No 194
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=20.66 E-value=3.9e+02 Score=23.97 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=19.7
Q ss_pred HHHhHHHHHHHHHHHhcCCCeeeec
Q psy13413 73 LQATVAHKASFISLVEASPKLTLVD 97 (276)
Q Consensus 73 L~~TI~lr~~F~elVe~~psLelVe 97 (276)
+....+.++.+.+.+++.|.++.+.
T Consensus 291 ~~~~~~~a~~l~~~L~~~p~v~~v~ 315 (421)
T 2ctz_A 291 AERHVENTLHLAHWLLEQPQVAWVN 315 (421)
T ss_dssp HHHHHHHHHHHHHHHHTCTTEEEEE
T ss_pred HHHHHHhHHHHHHHHHhCCCeeEEE
Confidence 4445577888999999999999874
No 195
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=20.54 E-value=53 Score=29.97 Aligned_cols=45 Identities=13% Similarity=0.262 Sum_probs=29.0
Q ss_pred HHHHH-hcCCcceecccccC-CceeEEEEecCCcccHHHHHHHHHHH
Q psy13413 133 VVRTL-RTSDAAFSLGEGTD-GLACVRFGMVTAETDITELLSLVEET 177 (276)
Q Consensus 133 Ll~kL-qesd~aFssG~~~~-G~~CVRfGMvT~d~DV~ELVd~I~~~ 177 (276)
++++| ++.+.....|..+. +..+||+++.+++.+++++++.+.+.
T Consensus 375 ~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l~~~l~~l~~~ 421 (427)
T 2hox_A 375 DCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDFDQLMYYLKDM 421 (427)
T ss_dssp SHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence 44444 34555555554443 46899999998666777777766544
No 196
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=20.42 E-value=4.3e+02 Score=23.02 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=30.7
Q ss_pred HHHHHHhcCCcceeccc---ccCCceeEEEEec--CCcccHHHHHHHHHHHh
Q psy13413 132 QVVRTLRTSDAAFSLGE---GTDGLACVRFGMV--TAETDITELLSLVEETG 178 (276)
Q Consensus 132 eLl~kLqesd~aFssG~---~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~G 178 (276)
++.++|.+.+.....+- ...|..+|||+.. .++.||+++++.+.+.-
T Consensus 350 ~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l 401 (409)
T 3kki_A 350 KVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAV 401 (409)
T ss_dssp HHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHH
Confidence 45666665544332211 2356789999987 57788998888887653
No 197
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=20.15 E-value=2.5e+02 Score=28.36 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=33.2
Q ss_pred HHHHHHhcCCcceecccccCCceeEEEEec--CCcccHHHHHHHHHHHhHhHHHh
Q psy13413 132 QVVRTLRTSDAAFSLGEGTDGLACVRFGMV--TAETDITELLSLVEETGQQEEES 184 (276)
Q Consensus 132 eLl~kLqesd~aFssG~~~~G~~CVRfGMv--T~d~DV~ELVd~I~~~GrEIEes 184 (276)
++.+.|++.+. +. ...+...|||.+- .++.|++.|++.+.+..++++++
T Consensus 519 ~l~~~L~e~GI-~v---~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~~~ 569 (730)
T 1c4k_A 519 IVANYLRDHGI-IP---EKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIEED 569 (730)
T ss_dssp HHHHHHHHTTC-CC---SEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCc-EE---EECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcccc
Confidence 45566766532 22 2235567776555 67789999999999999888655
Done!