Your job contains 1 sequence.
>psy13413
LFHKLTSLGLGLVTDVRVFLSHADHDTLVAGSADNGGEHGTGGIISGKSGLAHTGSVVDN
EGGNFFVTHVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTD
QAKAELNRLNIQVVRTLRTSDAAFSLGEGTDGLACVRFGMVTAETDITELLSLVEETGQQ
EEESWKFIDSMAEIHHSPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRVKGRTLDL
TAGRIETTENIYKYHAQATPTTTPTPQLTPQLTPPC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13413
(276 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0031174 - symbol:CG1486 species:7227 "Drosophila m... 491 3.8e-46 1
WB|WBGene00007593 - symbol:C14H10.3 species:6239 "Caenorh... 265 8.1e-22 1
UNIPROTKB|E1C4Q3 - symbol:PDXDC1 "Uncharacterized protein... 216 1.4e-16 1
UNIPROTKB|E7EMH5 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 3.6e-15 2
UNIPROTKB|E7EPL4 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 4.7e-15 2
UNIPROTKB|H3BNZ1 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 4.8e-15 2
UNIPROTKB|J3KNK7 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 5.0e-15 2
UNIPROTKB|Q6P996 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 5.3e-15 2
UNIPROTKB|H3BND4 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 5.6e-15 2
UNIPROTKB|F1PRF8 - symbol:PDXDC1 "Uncharacterized protein... 185 1.8e-14 2
UNIPROTKB|A7MBC2 - symbol:PDXDC1 "Pyridoxal-dependent dec... 190 8.6e-14 1
UNIPROTKB|F1M5Z2 - symbol:Pdxdc1 "Protein Pdxdc1" species... 185 2.5e-13 1
UNIPROTKB|F1M024 - symbol:Pdxdc1 "Protein Pdxdc1" species... 185 2.9e-13 1
RGD|1562597 - symbol:Pdxdc1 "pyridoxal-dependent decarbox... 185 2.9e-13 1
MGI|MGI:1920909 - symbol:Pdxdc1 "pyridoxal-dependent deca... 180 5.2e-13 2
ZFIN|ZDB-GENE-040912-16 - symbol:pdxdc1 "pyridoxal-depend... 179 5.0e-12 1
>FB|FBgn0031174 [details] [associations]
symbol:CG1486 species:7227 "Drosophila melanogaster"
[GO:0019752 "carboxylic acid metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0016831
"carboxy-lyase activity" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 Pfam:PF00282 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 EMBL:AE014298 GO:GO:0016831
GO:GO:0019752 GeneTree:ENSGT00390000009628 eggNOG:NOG260069
OMA:TENIYKY EMBL:AY069032 RefSeq:NP_608450.1 RefSeq:NP_728413.1
UniGene:Dm.2324 IntAct:Q9VRG8 MINT:MINT-744816
EnsemblMetazoa:FBtr0077190 EnsemblMetazoa:FBtr0077191 GeneID:33108
KEGG:dme:Dmel_CG1486 UCSC:CG1486-RA FlyBase:FBgn0031174
InParanoid:Q9VRG8 OrthoDB:EOG43FFBV GenomeRNAi:33108 NextBio:781943
Uniprot:Q9VRG8
Length = 852
Score = 491 (177.9 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 104/199 (52%), Positives = 135/199 (67%)
Query: 69 HVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNR 128
HVDIL+AT+ HKA FI LVE S L LV +P WAG+GGVR+VP W + TDQAK ELN+
Sbjct: 546 HVDILRATIKHKARFIHLVECSDVLRLVPLPEWAGMGGVRFVPEGWESLLTDQAKTELNK 605
Query: 129 LNIQVVRTLRTSDAAFSLGEGTDGLACVRFGMVTAETDITELLSLVEETGQQEEESWKFI 188
LNI +V L+++D AFSLGEGTDGL CVRFGMVT ET++ ELL LV G+ +E+ + +
Sbjct: 606 LNIDLVEALKSTDNAFSLGEGTDGLICVRFGMVTHETEVEELLDLVVTVGKSVQENSRVL 665
Query: 189 DSMAEIHHSPRRLTAIDY-------VWTQ--LK-VFVQCSLVNWWSPVDKDPTRVKGRTL 238
D+M+EI D +W + L+ V V + NWWSP K+ + +KGR+L
Sbjct: 666 DTMSEIVKKGIEAVTADLQRESEEKLWQEGILRHVPVVGRVFNWWSPPAKE-SGIKGRSL 724
Query: 239 DLTAGRIETTENIYKYHAQ 257
+LT G +E+TENIYKYH Q
Sbjct: 725 NLTQGVVESTENIYKYHMQ 743
>WB|WBGene00007593 [details] [associations]
symbol:C14H10.3 species:6239 "Caenorhabditis elegans"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 Pfam:PF00282 GO:GO:0030170 Gene3D:3.40.640.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752
GeneTree:ENSGT00390000009628 EMBL:Z50863 RefSeq:NP_001123108.1
ProteinModelPortal:B1Q254 PaxDb:B1Q254 EnsemblMetazoa:C14H10.3a
GeneID:181232 KEGG:cel:CELE_C14H10.3 CTD:181232 WormBase:C14H10.3a
eggNOG:NOG260069 HOGENOM:HOG000021039 InParanoid:B1Q254 OMA:TENIYKY
NextBio:913022 ArrayExpress:B1Q254 Uniprot:B1Q254
Length = 802
Score = 265 (98.3 bits), Expect = 8.1e-22, P = 8.1e-22
Identities = 60/197 (30%), Positives = 111/197 (56%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATD----TDQAKAELN 127
I+++TV K F L + P L L+ + WAG+G V Y+P T+ D K +++
Sbjct: 549 IVESTVVSKLKFSELKDDFPSLVLLPIRNWAGIGAVCYIPSIVKETNPEDWNDIQKQQIS 608
Query: 128 RLNIQVVRTLRTSDAAFSLGEGTD-GLACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
LN+++V L++ DAAFS G+ T G++CV+FGM++ D+ L+ +V + G++ E S +
Sbjct: 609 HLNLELVHQLKSVDAAFSSGDCTRYGVSCVKFGMLSDVKDLHNLVEMVAQKGKEIENSQQ 668
Query: 187 FIDSMAEI--------HHSPRRLT--AIDYVWTQLKVFVQCSLVNWWSPVDKDPTRVKGR 236
++DS+A + + + R+ + ++ + SLVNWWSP+ + ++GR
Sbjct: 669 YLDSLAHLIRQGIEAANEALRKENDQRLQNEGMMRQLPIMGSLVNWWSPLTPESQNIRGR 728
Query: 237 TLDLTAGRIETTENIYK 253
+L G ++ T+ ++K
Sbjct: 729 AFNLKTGEMQETDVLFK 745
>UNIPROTKB|E1C4Q3 [details] [associations]
symbol:PDXDC1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0019752 "carboxylic acid metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
InterPro:IPR002129 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00282 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752
GeneTree:ENSGT00390000009628 OMA:ENGSAYY EMBL:AADN02023931
IPI:IPI00595373 Ensembl:ENSGALT00000004425 Uniprot:E1C4Q3
Length = 794
Score = 216 (81.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 64/201 (31%), Positives = 106/201 (52%)
Query: 70 VDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRL 129
+ +L +T+ + F V + L ++ W GLG VRY + + +Q K EL ++
Sbjct: 490 IPVLTSTLQLREEFEQEVRRTVGLLYIEDLSWPGLGVVRYSYHSDEKNNDNQEK-ELEKI 548
Query: 130 NIQVVRTLRT--SDAAFSLGEGTDGLA-CVRFGMVTAETDITELLSLVEETGQQEEESWK 186
N ++++ L SD FSLG G CV GMVT + D++EL+ + TG++ EE+ +
Sbjct: 549 NTELLKKLNELESDLTFSLGPEFGGQKNCVYIGMVTEDLDVSELVETIAATGREIEENSR 608
Query: 187 FIDSMAE-----IHHSPRRLTAID---YVWTQL--KVFVQCSLVNWWSPVDKDPTRVKGR 236
+++M E I + +L + + L ++ V S++NW+SP P KGR
Sbjct: 609 LLENMTEVVRKGIQEAQLQLQKANEERLLEEGLLRQIPVVGSVLNWFSPFQASP---KGR 665
Query: 237 TLDLTAGRIETTENIYKYHAQ 257
T +LTAG +E+TE+ Y AQ
Sbjct: 666 TFNLTAGSLESTESTYVSKAQ 686
>UNIPROTKB|E7EMH5 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 EMBL:AC138932
HGNC:HGNC:28995 ChiTaRS:PDXDC1 EMBL:AC139256 IPI:IPI00908545
ProteinModelPortal:E7EMH5 Ensembl:ENST00000447912 UCSC:uc010uzm.2
ArrayExpress:E7EMH5 Bgee:E7EMH5 Uniprot:E7EMH5
Length = 697
Score = 190 (71.9 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 397 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 453
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 454 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 513
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 514 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 567
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 568 KGRTFNLTAGSLESTEPIYVYKAQ 591
Score = 36 (17.7 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 212 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 239
>UNIPROTKB|E7EPL4 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 EMBL:AC138932
HGNC:HGNC:28995 ChiTaRS:PDXDC1 EMBL:AC139256 IPI:IPI00645809
ProteinModelPortal:E7EPL4 Ensembl:ENST00000450288 UCSC:uc002ddb.4
ArrayExpress:E7EPL4 Bgee:E7EPL4 Uniprot:E7EPL4
Length = 760
Score = 190 (71.9 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 460 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 516
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 517 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 576
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 577 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 630
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 631 KGRTFNLTAGSLESTEPIYVYKAQ 654
Score = 36 (17.7 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 275 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 302
>UNIPROTKB|H3BNZ1 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 EMBL:AC138932
HGNC:HGNC:28995 ChiTaRS:PDXDC1 EMBL:AC139256
ProteinModelPortal:H3BNZ1 PRIDE:H3BNZ1 Ensembl:ENST00000569715
Bgee:H3BNZ1 Uniprot:H3BNZ1
Length = 761
Score = 190 (71.9 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 461 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 517
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 518 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 577
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 578 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 631
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 632 KGRTFNLTAGSLESTEPIYVYKAQ 655
Score = 36 (17.7 bits), Expect = 4.8e-15, Sum P(2) = 4.8e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 276 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 303
>UNIPROTKB|J3KNK7 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 EMBL:AC138932
HGNC:HGNC:28995 ChiTaRS:PDXDC1 EMBL:AC139256
ProteinModelPortal:J3KNK7 Ensembl:ENST00000325823 Uniprot:J3KNK7
Length = 773
Score = 190 (71.9 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 473 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 529
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 530 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 589
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 590 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 643
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 644 KGRTFNLTAGSLESTEPIYVYKAQ 667
Score = 36 (17.7 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 288 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 315
>UNIPROTKB|Q6P996 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0019752 "carboxylic acid metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA] [GO:0016831
"carboxy-lyase activity" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 PROSITE:PS00392
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 DrugBank:DB00114 GO:GO:0016831
eggNOG:COG0076 GO:GO:0019752 CTD:23042 HOVERGEN:HBG069100
OMA:ENGSAYY EMBL:D87438 EMBL:BC025366 EMBL:BC033748 EMBL:BC036520
EMBL:BC042104 EMBL:BC060871 EMBL:DQ111782 IPI:IPI00384285
IPI:IPI00384689 RefSeq:NP_055842.2 RefSeq:XP_003960662.1
UniGene:Hs.370781 ProteinModelPortal:Q6P996 IntAct:Q6P996
STRING:Q6P996 PhosphoSite:Q6P996 DMDM:156633546 PaxDb:Q6P996
PRIDE:Q6P996 DNASU:23042 Ensembl:ENST00000396410
Ensembl:ENST00000455313 GeneID:101060433 GeneID:23042
KEGG:hsa:101060433 KEGG:hsa:23042 UCSC:uc002dcz.3 UCSC:uc002dda.4
GeneCards:GC16P015068 H-InvDB:HIX0013196 H-InvDB:HIX0019757
H-InvDB:HIX0173252 HGNC:HGNC:28995 MIM:614244 neXtProt:NX_Q6P996
PharmGKB:PA162399182 InParanoid:Q6P996 PhylomeDB:Q6P996
ChiTaRS:PDXDC1 GenomeRNAi:23042 NextBio:44070 ArrayExpress:Q6P996
Bgee:Q6P996 CleanEx:HS_PDXDC1 Genevestigator:Q6P996 Uniprot:Q6P996
Length = 788
Score = 190 (71.9 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 488 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 544
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 545 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 604
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 605 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 658
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 659 KGRTFNLTAGSLESTEPIYVYKAQ 682
Score = 36 (17.7 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 303 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 330
>UNIPROTKB|H3BND4 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0019752
"carboxylic acid metabolic process" evidence=IEA] [GO:0030170
"pyridoxal phosphate binding" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 EMBL:AC138932
HGNC:HGNC:28995 ChiTaRS:PDXDC1 EMBL:AC139256
ProteinModelPortal:H3BND4 Ensembl:ENST00000563679 Bgee:H3BND4
Uniprot:H3BND4
Length = 806
Score = 190 (71.9 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 64/204 (31%), Positives = 98/204 (48%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VEA+ L VD P W+G+G VRY D K++ NI
Sbjct: 506 VLCCTLQLREEFKQEVEATAGLLYVDDPNWSGIGVVRY---EHANDDKSSLKSDPEGENI 562
Query: 132 Q--VVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWK 186
+++ L SD F +G + +C+ GM + D EL+ + T ++ EE+ +
Sbjct: 563 HAGLLKKLNELESDLTFKIGPEYKSMKSCLYVGMASDNVDAAELVETIAATAREIEENSR 622
Query: 187 FIDSMAEIHH-------------SPRRLTAIDYVWTQLKVFVQCSLVNWWSPVDKDPTRV 233
+++M E+ S RL + V Q+ V S++NW+SPV
Sbjct: 623 LLENMTEVVRKGIQEAQVELQKASEERLLE-EGVLRQIPVVG--SVLNWFSPVQ---ALQ 676
Query: 234 KGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE IY Y AQ
Sbjct: 677 KGRTFNLTAGSLESTEPIYVYKAQ 700
Score = 36 (17.7 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 321 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 348
>UNIPROTKB|F1PRF8 [details] [associations]
symbol:PDXDC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030170 "pyridoxal phosphate binding"
evidence=IEA] [GO:0019752 "carboxylic acid metabolic process"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
InterPro:IPR002129 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00282 GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752
CTD:23042 GeneTree:ENSGT00390000009628 OMA:ENGSAYY
EMBL:AAEX03004502 RefSeq:XP_547116.2 Ensembl:ENSCAFT00000029789
GeneID:489996 KEGG:cfa:489996 Uniprot:F1PRF8
Length = 788
Score = 185 (70.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 62/207 (29%), Positives = 105/207 (50%)
Query: 68 THVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELN 127
+ + IL T+ + F V A+ L VD P W G+G VRY A D D++ +L+
Sbjct: 484 SQLPILTCTLQLREEFKQEVTAAAGLLHVDDPNWPGIGVVRYEH----AND-DKSSLKLD 538
Query: 128 ----RLNIQVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQ 180
+++ +++ L SD F +G + +C+ GM + + DI+EL+ + T ++
Sbjct: 539 PEGEKIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYVGMASDDVDISELVETIAVTARE 598
Query: 181 EEESWKFIDSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC----SLVNWWSPVDKDP 230
EE+ + +++M E I + +L A + + V Q S++NW+SPV
Sbjct: 599 IEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQ 658
Query: 231 TRVKGRTLDLTAGRIETTENIYKYHAQ 257
KGRT +LTAG +E+TE+ Y Y Q
Sbjct: 659 ---KGRTFNLTAGSLESTEHTYVYKVQ 682
Score = 36 (17.7 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 303 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 330
>UNIPROTKB|A7MBC2 [details] [associations]
symbol:PDXDC1 "Pyridoxal-dependent decarboxylase
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016831
"carboxy-lyase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0019752 "carboxylic acid
metabolic process" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 eggNOG:COG0076 GO:GO:0019752
EMBL:BC151480 IPI:IPI00866982 RefSeq:NP_001095329.1
UniGene:Bt.12962 ProteinModelPortal:A7MBC2 PRIDE:A7MBC2
Ensembl:ENSBTAT00000046463 GeneID:505868 KEGG:bta:505868 CTD:23042
GeneTree:ENSGT00390000009628 HOGENOM:HOG000115485
HOVERGEN:HBG069100 InParanoid:A7MBC2 OMA:ENGSAYY OrthoDB:EOG4ZW59F
NextBio:20867351 Uniprot:A7MBC2
Length = 787
Score = 190 (71.9 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 62/203 (30%), Positives = 103/203 (50%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELN---- 127
+L T+ + F VEA+ L VD P W G+G VRY A D D++ +L+
Sbjct: 489 VLTCTLQLREEFKQEVEATAGLLYVDDPNWPGIGVVRYEH----AND-DKSSLKLDPEGE 543
Query: 128 RLNIQVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEES 184
+++ +++ L SD F +G + +C+ GM + + DI+EL+ + T ++ EE
Sbjct: 544 KIHAGLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDIDISELVETIAVTAREIEED 603
Query: 185 WKFIDSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC----SLVNWWSPVDKDPTRVK 234
+ +++M E I + +L A + + V Q S++NW+SPV K
Sbjct: 604 SRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQ---K 660
Query: 235 GRTLDLTAGRIETTENIYKYHAQ 257
GRT +LTAG +E+TE+ Y Y Q
Sbjct: 661 GRTFNLTAGSLESTEHTYVYKVQ 683
>UNIPROTKB|F1M5Z2 [details] [associations]
symbol:Pdxdc1 "Protein Pdxdc1" species:10116 "Rattus
norvegicus" [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0019752 "carboxylic acid metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
InterPro:IPR002129 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00282 RGD:1562597 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016831 GO:GO:0019752 IPI:IPI00950109
Ensembl:ENSRNOT00000066083 ArrayExpress:F1M5Z2 Uniprot:F1M5Z2
Length = 709
Score = 185 (70.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 58/199 (29%), Positives = 98/199 (49%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VE + L VD P W G+G VRY T Q+ E +++
Sbjct: 487 VLTCTLQLREEFKKEVEGTAGLLYVDDPNWPGIGVVRYEHANDDNTSL-QSDPEGEKIHT 545
Query: 132 QVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWKFI 188
+++ L SD F +G + +C+ GM + + D++EL+ + T ++ EE+ + +
Sbjct: 546 GLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAITAREIEENSRLL 605
Query: 189 DSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC----SLVNWWSPVDKDPTRVKGRTL 238
++M E I + +L A + + V Q S++NW+SPV KGR+
Sbjct: 606 ENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQ---KGRSF 662
Query: 239 DLTAGRIETTENIYKYHAQ 257
+LTAG +E+TE Y Y Q
Sbjct: 663 NLTAGSLESTEYTYVYKVQ 681
>UNIPROTKB|F1M024 [details] [associations]
symbol:Pdxdc1 "Protein Pdxdc1" species:10116 "Rattus
norvegicus" [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0019752 "carboxylic acid metabolic process" evidence=IEA]
[GO:0030170 "pyridoxal phosphate binding" evidence=IEA]
InterPro:IPR002129 InterPro:IPR015421 InterPro:IPR015422
Pfam:PF00282 RGD:1562597 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016831 GO:GO:0019752 IPI:IPI00767488 PRIDE:F1M024
Ensembl:ENSRNOT00000040132 ArrayExpress:F1M024 Uniprot:F1M024
Length = 784
Score = 185 (70.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 58/199 (29%), Positives = 98/199 (49%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VE + L VD P W G+G VRY T Q+ E +++
Sbjct: 487 VLTCTLQLREEFKKEVEGTAGLLYVDDPNWPGIGVVRYEHANDDNTSL-QSDPEGEKIHT 545
Query: 132 QVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWKFI 188
+++ L SD F +G + +C+ GM + + D++EL+ + T ++ EE+ + +
Sbjct: 546 GLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAITAREIEENSRLL 605
Query: 189 DSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC----SLVNWWSPVDKDPTRVKGRTL 238
++M E I + +L A + + V Q S++NW+SPV KGR+
Sbjct: 606 ENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQ---KGRSF 662
Query: 239 DLTAGRIETTENIYKYHAQ 257
+LTAG +E+TE Y Y Q
Sbjct: 663 NLTAGSLESTEYTYVYKVQ 681
>RGD|1562597 [details] [associations]
symbol:Pdxdc1 "pyridoxal-dependent decarboxylase domain
containing 1" species:10116 "Rattus norvegicus" [GO:0016831
"carboxy-lyase activity" evidence=IEA] [GO:0019752 "carboxylic acid
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] InterPro:IPR002129 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00282 RGD:1562597 GO:GO:0030170
Gene3D:3.40.640.10 Gene3D:3.90.1150.10 InterPro:IPR015424
SUPFAM:SSF53383 GO:GO:0016831 GO:GO:0019752 CTD:23042
GeneTree:ENSGT00390000009628 OMA:ENGSAYY EMBL:CH474017
RefSeq:NP_001128433.1 UniGene:Rn.178721 Ensembl:ENSRNOT00000003284
GeneID:304721 KEGG:rno:304721 NextBio:653515 Uniprot:G3V6B0
Length = 785
Score = 185 (70.2 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 58/199 (29%), Positives = 98/199 (49%)
Query: 72 ILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAELNRLNI 131
+L T+ + F VE + L VD P W G+G VRY T Q+ E +++
Sbjct: 488 VLTCTLQLREEFKKEVEGTAGLLYVDDPNWPGIGVVRYEHANDDNTSL-QSDPEGEKIHT 546
Query: 132 QVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAETDITELLSLVEETGQQEEESWKFI 188
+++ L SD F +G + +C+ GM + + D++EL+ + T ++ EE+ + +
Sbjct: 547 GLLKKLNELESDLTFKMGPEYKSMKSCIYIGMASDDVDVSELVETIAITAREIEENSRLL 606
Query: 189 DSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC----SLVNWWSPVDKDPTRVKGRTL 238
++M E I + +L A + + V Q S++NW+SPV KGR+
Sbjct: 607 ENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPVVGSVLNWFSPVQASQ---KGRSF 663
Query: 239 DLTAGRIETTENIYKYHAQ 257
+LTAG +E+TE Y Y Q
Sbjct: 664 NLTAGSLESTEYTYVYKVQ 682
>MGI|MGI:1920909 [details] [associations]
symbol:Pdxdc1 "pyridoxal-dependent decarboxylase domain
containing 1" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0016831
"carboxy-lyase activity" evidence=IEA] [GO:0019752 "carboxylic acid
metabolic process" evidence=IEA] [GO:0030170 "pyridoxal phosphate
binding" evidence=IEA] InterPro:IPR002129 InterPro:IPR015421
InterPro:IPR015422 Pfam:PF00282 PROSITE:PS00392 MGI:MGI:1920909
GO:GO:0030170 Gene3D:3.40.640.10 Gene3D:3.90.1150.10
InterPro:IPR015424 SUPFAM:SSF53383 GO:GO:0016831 eggNOG:COG0076
GO:GO:0019752 CTD:23042 GeneTree:ENSGT00390000009628
HOVERGEN:HBG069100 OMA:ENGSAYY OrthoDB:EOG4ZW59F EMBL:AK004611
EMBL:AK030613 EMBL:AK033107 EMBL:AK054329 EMBL:AK075829
EMBL:AK163696 EMBL:AK165587 EMBL:AK170661 EMBL:BC005541
IPI:IPI00336503 IPI:IPI00742405 IPI:IPI00856504 IPI:IPI00856623
IPI:IPI00857581 RefSeq:NP_001034622.1 RefSeq:NP_444411.2
UniGene:Mm.171484 ProteinModelPortal:Q99K01 PhosphoSite:Q99K01
PaxDb:Q99K01 PRIDE:Q99K01 Ensembl:ENSMUST00000023361
Ensembl:ENSMUST00000115802 Ensembl:ENSMUST00000115804 GeneID:94184
KEGG:mmu:94184 UCSC:uc007ygl.1 UCSC:uc007ygm.1 UCSC:uc007ygn.1
InParanoid:Q99K01 NextBio:352141 Bgee:Q99K01 Genevestigator:Q99K01
Uniprot:Q99K01
Length = 787
Score = 180 (68.4 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 62/222 (27%), Positives = 107/222 (48%)
Query: 50 GLAHTGSVVDNEGGNFFVTHVDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRY 109
GL G VD + + + +L T+ + F VE + L VD P W G+G VRY
Sbjct: 467 GLGTRGEDVD-QLITCIQSKLPVLTCTLQLREEFKQEVEGTAGLLYVDDPNWPGIGVVRY 525
Query: 110 VPPAWGATDTD-QAKAELNRLNIQVVRTLRT--SDAAFSLGEGTDGL-ACVRFGMVTAET 165
DT ++ E +++ +++ L SD F +G + +C+ GM + +
Sbjct: 526 EHA--NDDDTSLKSDPEGEKIHTGLLKKLNELESDLTFKIGPEYKSMKSCIYIGMASDDV 583
Query: 166 DITELLSLVEETGQQEEESWKFIDSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQC-- 217
D++EL+ + T ++ EE+ + +++M E I + +L A + + V Q
Sbjct: 584 DVSELVETIAVTAREIEENSRLLENMTEVVRKGIQEAQVQLQKANEERLLEEGVLRQIPV 643
Query: 218 --SLVNWWSPVDKDPTRVKGRTLDLTAGRIETTENIYKYHAQ 257
S++NW+SPV KGR+ +LTAG +E+TE Y + Q
Sbjct: 644 VGSVLNWFSPVQASQ---KGRSFNLTAGSLESTEYTYVHKVQ 682
Score = 36 (17.7 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 8 LGLGLVTDVRVFLSHADHD-TLVAGSADN 35
LGL V V ++ H D TLVAG N
Sbjct: 303 LGLPAVPAVTLY-KHDDPALTLVAGLTSN 330
>ZFIN|ZDB-GENE-040912-16 [details] [associations]
symbol:pdxdc1 "pyridoxal-dependent decarboxylase
domain containing 1" species:7955 "Danio rerio" [GO:0016831
"carboxy-lyase activity" evidence=IEA] [GO:0030170 "pyridoxal
phosphate binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0019752 "carboxylic acid metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016829 "lyase activity" evidence=IEA] InterPro:IPR002129
InterPro:IPR015421 InterPro:IPR015422 Pfam:PF00282
ZFIN:ZDB-GENE-040912-16 GO:GO:0030170 Gene3D:3.40.640.10
Gene3D:3.90.1150.10 InterPro:IPR015424 SUPFAM:SSF53383
GO:GO:0016831 GO:GO:0019752 CTD:23042 GeneTree:ENSGT00390000009628
EMBL:CR388147 IPI:IPI00481130 RefSeq:NP_001004552.2
UniGene:Dr.36529 Ensembl:ENSDART00000144696 GeneID:447813
KEGG:dre:447813 NextBio:20832337 ArrayExpress:F1QMI9 Bgee:F1QMI9
Uniprot:F1QMI9
Length = 766
Score = 179 (68.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 60/203 (29%), Positives = 98/203 (48%)
Query: 70 VDILQATVAHKASFISLVEASPKLTLVDMPGWAGLGGVRYVPPAWGATDTDQAKAE--LN 127
+ +L T+ + F V L+ ++ W GLG VR+ P TD D+ K + +
Sbjct: 478 IPLLCCTLRLRQDFRDEVLQQASLSYIEDLNWPGLGVVRFEPRT---TDLDEDKRQDRVE 534
Query: 128 RLNIQVVRTLRT--SDAAFSLG-EGTDGLACVRFGMVTAETDITELLSLVEETGQQEEES 184
++N +++ L +D FS G E ++ C+ G+ T + D+ EL+ + G+ EES
Sbjct: 535 KINSDLLKKLMELDTDLNFSGGPEFSEEKNCIFIGIATEDLDVAELVETIMSLGRDIEES 594
Query: 185 WKFIDSMAE-----IHHSPRRLT-AIDYVWTQLKVFVQCSLV----NWWSPVDKDPTRVK 234
K ++M E I + +L A + + V Q LV NW+SPV VK
Sbjct: 595 GKLFENMTEVVRKGIQEAELQLQKANEEKLMEEGVLRQIPLVSSVLNWFSPVQAS---VK 651
Query: 235 GRTLDLTAGRIETTENIYKYHAQ 257
GRT +L G +++TE +Y AQ
Sbjct: 652 GRTFNLAEGCLDSTEPVYSIKAQ 674
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 276 247 0.00078 114 3 11 22 0.44 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 16
No. of states in DFA: 614 (65 KB)
Total size of DFA: 191 KB (2109 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.19u 0.09s 20.28t Elapsed: 00:00:03
Total cpu time: 20.20u 0.09s 20.29t Elapsed: 00:00:03
Start: Thu Aug 15 15:36:12 2013 End: Thu Aug 15 15:36:15 2013