Query psy13414
Match_columns 161
No_of_seqs 147 out of 1099
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 18:52:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qb0_A Actin-related protein 4 100.0 9.5E-41 3.2E-45 273.8 10.9 156 2-159 173-436 (498)
2 3dwl_A Actin-related protein 3 100.0 5E-40 1.7E-44 266.2 8.9 155 2-159 190-349 (427)
3 1k8k_B ARP2, actin-like protei 100.0 1.7E-37 5.9E-42 249.2 13.2 158 2-159 163-320 (394)
4 2fxu_A Alpha-actin-1, actin, a 100.0 8E-36 2.7E-40 238.0 14.9 157 2-158 159-315 (375)
5 4fo0_A Actin-related protein 8 100.0 9.3E-34 3.2E-38 237.4 10.2 158 2-159 257-523 (593)
6 1k8k_A ARP3, actin-like protei 100.0 4.2E-33 1.4E-37 224.8 11.7 157 2-158 174-337 (418)
7 4am6_A Actin-like protein ARP8 99.9 4E-27 1.4E-31 196.1 6.8 146 2-157 281-521 (655)
8 1jce_A ROD shape-determining p 99.4 5.6E-13 1.9E-17 104.5 6.4 134 2-158 158-299 (344)
9 1dkg_D Molecular chaperone DNA 98.5 3.4E-08 1.2E-12 78.2 1.3 120 19-158 223-355 (383)
10 2ych_A Competence protein PILM 98.4 9.2E-08 3.1E-12 75.5 3.3 126 2-157 202-327 (377)
11 3h1q_A Ethanolamine utilizatio 98.2 1.3E-06 4.5E-11 65.8 5.3 99 2-158 150-248 (272)
12 2v7y_A Chaperone protein DNAK; 98.1 9.6E-07 3.3E-11 72.7 3.2 131 2-158 172-324 (509)
13 4a2a_A Cell division protein F 97.9 1.6E-05 5.5E-10 64.0 5.5 125 2-157 217-349 (419)
14 3qfu_A 78 kDa glucose-regulate 97.6 1.3E-05 4.6E-10 63.2 1.0 41 116-158 325-365 (394)
15 2kho_A Heat shock protein 70; 97.1 0.00021 7.3E-09 59.9 3.1 113 19-157 223-354 (605)
16 1yuw_A Heat shock cognate 71 k 97.1 0.00017 6E-09 59.9 2.3 122 10-157 214-351 (554)
17 3i33_A Heat shock-related 70 k 96.9 0.00042 1.4E-08 54.9 2.3 41 116-158 333-373 (404)
18 3d2f_A Heat shock protein homo 96.7 0.00098 3.4E-08 56.7 3.7 112 19-157 228-355 (675)
19 4gni_A Putative heat shock pro 95.6 0.0024 8.2E-08 50.7 0.5 40 116-157 326-365 (409)
20 2d0o_A DIOL dehydratase-reacti 95.1 0.076 2.6E-06 44.0 7.8 50 2-62 418-467 (610)
21 2fsj_A Hypothetical protein TA 95.1 0.017 6E-07 44.9 4.0 38 2-39 201-240 (346)
22 3js6_A Uncharacterized PARM pr 94.6 0.016 5.4E-07 45.5 2.4 38 2-39 195-232 (355)
23 1nbw_A Glycerol dehydratase re 94.3 0.1 3.5E-06 43.4 6.7 50 2-62 420-469 (607)
24 4ehu_A Activator of 2-hydroxyi 80.2 0.53 1.8E-05 34.9 1.0 26 132-157 202-227 (276)
25 4b9q_A Chaperone protein DNAK; 79.3 0.95 3.3E-05 37.8 2.4 39 117-157 316-354 (605)
26 2zgy_A Plasmid segregation pro 62.4 9.7 0.00033 28.6 4.5 53 2-58 175-229 (320)
27 4apw_A ALP12; actin-like prote 59.6 1.1 3.8E-05 34.4 -1.4 37 2-38 183-219 (329)
28 4fo0_A Actin-related protein 8 56.8 4 0.00014 33.6 1.5 32 81-112 334-369 (593)
29 4apw_A ALP12; actin-like prote 48.1 10 0.00035 28.9 2.4 15 135-149 277-291 (329)
30 3kbq_A Protein TA0487; structu 34.5 24 0.00081 24.4 2.4 25 116-149 51-75 (172)
31 3pzy_A MOG; ssgcid, seattle st 34.4 25 0.00086 23.9 2.5 25 115-148 53-78 (164)
32 1y5e_A Molybdenum cofactor bio 33.0 25 0.00084 24.0 2.3 9 140-148 76-84 (169)
33 2is8_A Molybdopterin biosynthe 32.4 28 0.00096 23.6 2.5 24 116-148 49-74 (164)
34 1uvq_C Orexin; immunology, MHC 31.8 12 0.00042 17.9 0.3 10 141-150 17-26 (33)
35 2pjk_A 178AA long hypothetical 30.6 29 0.00099 24.0 2.3 10 140-149 85-94 (178)
36 2pbq_A Molybdenum cofactor bio 30.2 32 0.0011 23.7 2.5 25 116-149 55-81 (178)
37 1jlj_A Gephyrin; globular alph 29.8 32 0.0011 24.0 2.5 9 140-148 82-90 (189)
38 1mkz_A Molybdenum cofactor bio 27.1 40 0.0014 23.0 2.5 10 140-149 73-82 (172)
39 2g2c_A Putative molybdenum cof 26.5 41 0.0014 22.8 2.5 24 116-148 57-81 (167)
40 3rfq_A Pterin-4-alpha-carbinol 26.3 38 0.0013 23.7 2.3 11 138-148 91-101 (185)
41 1uuy_A CNX1, molybdopterin bio 25.7 43 0.0015 22.6 2.5 9 140-148 75-83 (167)
42 2ivn_A O-sialoglycoprotein end 25.4 17 0.00058 27.7 0.3 21 137-157 245-265 (330)
43 4f02_C Eukaryotic translation 22.9 34 0.0012 15.6 1.0 15 19-33 6-20 (27)
44 1di6_A MOGA, molybdenum cofact 22.5 53 0.0018 23.0 2.5 9 140-148 70-78 (195)
No 1
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.5e-41 Score=273.84 Aligned_cols=156 Identities=27% Similarity=0.402 Sum_probs=134.2
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcC------------------CCCCc------hh-HHHHHHHHh
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERG------------------YSFTT------TA-EREIVRDIK 56 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~------------------~~~~~------~~-~~~~~~~iK 56 (161)
+|+|+||++|++++++++++++||+++|++|+++|.+++ +.+.. +. +++++++||
T Consensus 173 ~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iK 252 (498)
T 3qb0_A 173 TCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECK 252 (498)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHH
T ss_pred cEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHH
Confidence 699999999999999999999999999999999998652 22221 23 566999999
Q ss_pred hhccccccc--HHHHHHHhhcCCCCccEEECCCCcEEeecCe-eccccccCcCCCCCCC---------------------
Q psy13414 57 EKLCYVALD--FEQEMATAASSSSLEKSYELPDGQVITIGNE-RFRCPEALFQPAFLGM--------------------- 112 (161)
Q Consensus 57 e~~~~v~~~--~~~e~~~~~~~~~~~~~y~lpdg~~i~l~~e-r~~~~E~LF~p~~~~~--------------------- 112 (161)
|++|||+.+ ++++... ......+.|+||||+.|.+|.| ||++||+||+|+++|.
T Consensus 253 E~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~ 330 (498)
T 3qb0_A 253 ETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVP 330 (498)
T ss_dssp HHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCC
T ss_pred HhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccccc
Confidence 999999986 5544322 1234568999999999999999 9999999999987643
Q ss_pred -----------------------------------------------------------CCCCHHHHHHHHHHcCCHHHH
Q psy13414 113 -----------------------------------------------------------EACGIHETTYNSIMKCDVDIR 133 (161)
Q Consensus 113 -----------------------------------------------------------~~~~l~~~i~~si~~~~~d~r 133 (161)
+..||+++|.+||.+||+|+|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r 410 (498)
T 3qb0_A 331 LKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLR 410 (498)
T ss_dssp CCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTTTH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHH
Confidence 567999999999999999999
Q ss_pred HHhhcCeEEecCCCCCCChhhhhccC
Q psy13414 134 KDLYANTVLSGVLFILEKPNLYIFGN 159 (161)
Q Consensus 134 ~~l~~nIvl~GG~s~~~Gf~~RL~~~ 159 (161)
+.||+||||+||+|++|||.+||.+|
T Consensus 411 ~~L~~nIvLsGGst~~pGf~~Rl~~E 436 (498)
T 3qb0_A 411 ATLAHNVVLTGGTSSIPGLSDRLMTE 436 (498)
T ss_dssp HHHHTTEEEESGGGGSTTHHHHHHHH
T ss_pred HHHhcCEEEeCCccCchhHHHHHHHH
Confidence 99999999999999999999999764
No 2
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-40 Score=266.18 Aligned_cols=155 Identities=26% Similarity=0.431 Sum_probs=128.4
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+|+||++|++++++++++++||+++|++|+++|.++++. ..+.+++++|||++|||+.|+++++......+...+
T Consensus 190 ~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~ 266 (427)
T 3dwl_A 190 VTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYL 266 (427)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----C
T ss_pred ceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHHHHhcCcccCCHHHHHHHhhcCccccc
Confidence 69999999999999999999999999999999999988764 456789999999999999999888765433333356
Q ss_pred EEEC--CCCc--EEeecCeeccccccCcCCCCCCCC-CCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhh
Q psy13414 82 SYEL--PDGQ--VITIGNERFRCPEALFQPAFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYI 156 (161)
Q Consensus 82 ~y~l--pdg~--~i~l~~er~~~~E~LF~p~~~~~~-~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL 156 (161)
.|++ |||+ .++++.|||++||+||+|+++|.+ ..||+++|.+||.+||+|+|+.|++||||+||+|++|||.+||
T Consensus 267 ~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL 346 (427)
T 3dwl_A 267 KYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRL 346 (427)
T ss_dssp CBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHH
T ss_pred eeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHH
Confidence 7888 8997 889999999999999999999988 4899999999999999999999999999999999999999999
Q ss_pred ccC
Q psy13414 157 FGN 159 (161)
Q Consensus 157 ~~~ 159 (161)
..|
T Consensus 347 ~~E 349 (427)
T 3dwl_A 347 QRD 349 (427)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 3
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=1.7e-37 Score=249.21 Aligned_cols=158 Identities=42% Similarity=0.732 Sum_probs=144.5
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+|+||++|+++.+++.++++||+++|++|.++|..+++++.+..+.+.++++|+++||++.|+..+++.........+
T Consensus 163 ~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~ 242 (394)
T 1k8k_B 163 VTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVE 242 (394)
T ss_dssp CEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCE
T ss_pred ceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCce
Confidence 58999999999999999999999999999999999998888766667899999999999999888777654433344567
Q ss_pred EEECCCCcEEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhccC
Q psy13414 82 SYELPDGQVITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFGN 159 (161)
Q Consensus 82 ~y~lpdg~~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~~ 159 (161)
.|+||||+.+.++.+||++||+||+|++++.+..+|+++|.++|.+||+|+|+.|++||||+||+|++|||.+||..+
T Consensus 243 ~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~e 320 (394)
T 1k8k_B 243 SYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERE 320 (394)
T ss_dssp EEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHH
T ss_pred EEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHH
Confidence 899999999999999999999999999999899999999999999999999999999999999999999999999753
No 4
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=8e-36 Score=237.98 Aligned_cols=157 Identities=78% Similarity=1.167 Sum_probs=144.7
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+|+||++|+++.++..++++||+++|++|.++|..+++++.+..+.+.++++|+++||++.++.+++.+...+.....
T Consensus 159 tt~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~ 238 (375)
T 2fxu_A 159 VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK 238 (375)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCE
T ss_pred ceEEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCe
Confidence 58999999999999999999999999999999999998887766678899999999999999998877665544445568
Q ss_pred EEECCCCcEEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhcc
Q psy13414 82 SYELPDGQVITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 82 ~y~lpdg~~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~ 158 (161)
.|++|||+.+.++.+||.+||.||+|++++.+..+|+++|.++|.+||+|+|+.+++||||+||+|++|||.+||..
T Consensus 239 ~~~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~ 315 (375)
T 2fxu_A 239 SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQK 315 (375)
T ss_dssp EEECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHH
T ss_pred EEECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHH
Confidence 89999999999999999999999999998888999999999999999999999999999999999999999999965
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.3e-34 Score=237.35 Aligned_cols=158 Identities=18% Similarity=0.283 Sum_probs=103.1
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCC-----chhHHHHHHHHhhhcccccccHHHH-------
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFT-----TTAEREIVRDIKEKLCYVALDFEQE------- 69 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~-----~~~~~~~~~~iKe~~~~v~~~~~~e------- 69 (161)
.|+|+||+||++++++++++++||++||++|+++|..+++++. ...++++++++||++|||+.|+..+
T Consensus 257 ~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~~~~ 336 (593)
T 4fo0_A 257 KTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHEFQI 336 (593)
T ss_dssp CEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEEEEE
T ss_pred ceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhhhhc
Confidence 5999999999999999999999999999999999999886553 3568899999999999998654211
Q ss_pred -----------------HHHh-----------------------------------------------hcCCCCccEEEC
Q psy13414 70 -----------------MATA-----------------------------------------------ASSSSLEKSYEL 85 (161)
Q Consensus 70 -----------------~~~~-----------------------------------------------~~~~~~~~~y~l 85 (161)
...+ .........|++
T Consensus 337 ~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (593)
T 4fo0_A 337 RHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKSASK 416 (593)
T ss_dssp CCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC-------------------------------------
T ss_pred ccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhcccccccccC
Confidence 0000 001123457889
Q ss_pred CCCcEEeecCeeccccccCcCCCCC--------------------------------CCCCCCHHHHHHHHHHcCC-HHH
Q psy13414 86 PDGQVITIGNERFRCPEALFQPAFL--------------------------------GMEACGIHETTYNSIMKCD-VDI 132 (161)
Q Consensus 86 pdg~~i~l~~er~~~~E~LF~p~~~--------------------------------~~~~~~l~~~i~~si~~~~-~d~ 132 (161)
|+|..+.++.+|+.+||.||+|+.. +.+..||+++|.+||.+|| .|+
T Consensus 417 p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~~D~ 496 (593)
T 4fo0_A 417 PIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDT 496 (593)
T ss_dssp ------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSSHHH
T ss_pred CCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCcHHH
Confidence 9999999999999999999999642 1134699999999999998 699
Q ss_pred HHHhhcCeEEecCCCCCCChhhhhccC
Q psy13414 133 RKDLYANTVLSGVLFILEKPNLYIFGN 159 (161)
Q Consensus 133 r~~l~~nIvl~GG~s~~~Gf~~RL~~~ 159 (161)
|+.||+||||+||+|++|||.+||..+
T Consensus 497 r~~L~~NIvltGG~s~~pGf~~RL~~e 523 (593)
T 4fo0_A 497 KKKMYSSILVVGGGLMFHKAQEFLQHR 523 (593)
T ss_dssp HHHHHHEEEEESSTTCCBTHHHHHHHH
T ss_pred HHHHhCCEEEEchhhchhcHHHHHHHH
Confidence 999999999999999999999999754
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.2e-33 Score=224.84 Aligned_cols=157 Identities=27% Similarity=0.446 Sum_probs=140.3
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcC-CCCc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS-SSLE 80 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~-~~~~ 80 (161)
+|+|+||++|+++.+++.++++||+++|++|.++|.+++..+....+.+.++++|+++||++.|+.+++++.... ....
T Consensus 174 tt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~ 253 (418)
T 1k8k_A 174 VTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWI 253 (418)
T ss_dssp CEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTC
T ss_pred ceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHHHHhhcccccccc
Confidence 589999999999999999999999999999999999988777666788999999999999999887776543221 1224
Q ss_pred cEEECCCCc-----EEeecCeeccccccCcCCCCCCCCC-CCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhh
Q psy13414 81 KSYELPDGQ-----VITIGNERFRCPEALFQPAFLGMEA-CGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNL 154 (161)
Q Consensus 81 ~~y~lpdg~-----~i~l~~er~~~~E~LF~p~~~~~~~-~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~ 154 (161)
..|++||+. .+.++.+||++||+||+|++++.+. .+|+++|.++|.+||+|+|+.+++||||+||+|++|||.+
T Consensus 254 ~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~ 333 (418)
T 1k8k_A 254 KQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGR 333 (418)
T ss_dssp EEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHH
T ss_pred eeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHH
Confidence 689999998 8999999999999999999887764 7999999999999999999999999999999999999999
Q ss_pred hhcc
Q psy13414 155 YIFG 158 (161)
Q Consensus 155 RL~~ 158 (161)
||..
T Consensus 334 rl~~ 337 (418)
T 1k8k_A 334 RLQR 337 (418)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=99.93 E-value=4e-27 Score=196.05 Aligned_cols=146 Identities=16% Similarity=0.275 Sum_probs=118.0
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCC-----CCCchhHHHHHHHHhhhcccc-cccHHHHHHHhhc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGY-----SFTTTAEREIVRDIKEKLCYV-ALDFEQEMATAAS 75 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~-----~~~~~~~~~~~~~iKe~~~~v-~~~~~~e~~~~~~ 75 (161)
+|+|+||++|++++++++++++||+++|++|+++|.++++ ++.+..+.+++++|||++||| +.|+..
T Consensus 281 ~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~------- 353 (655)
T 4am6_A 281 ETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAV------- 353 (655)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCS-------
T ss_pred eEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhh-------
Confidence 6999999999999999999999999999999999999986 456778999999999999999 455420
Q ss_pred CCCCccEE--ECCCC----cEEeecCeeccccccCcCCCCCCC-------------------------------------
Q psy13414 76 SSSLEKSY--ELPDG----QVITIGNERFRCPEALFQPAFLGM------------------------------------- 112 (161)
Q Consensus 76 ~~~~~~~y--~lpdg----~~i~l~~er~~~~E~LF~p~~~~~------------------------------------- 112 (161)
....| ..|++ ..+++|.|||+|||+||+|++++.
T Consensus 354 ---q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~ 430 (655)
T 4am6_A 354 ---QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFES 430 (655)
T ss_dssp ---EEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHH
T ss_pred ---hhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchhHHhh
Confidence 11222 23554 468999999999999999965310
Q ss_pred ------------------------------------------CCCCHHHHHHHHHH-cC-CHHHHH--HhhcCeEEecCC
Q psy13414 113 ------------------------------------------EACGIHETTYNSIM-KC-DVDIRK--DLYANTVLSGVL 146 (161)
Q Consensus 113 ------------------------------------------~~~~l~~~i~~si~-~~-~~d~r~--~l~~nIvl~GG~ 146 (161)
...+|..+|.+||. +| ..|.++ ++|+||+++||+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGgg 510 (655)
T 4am6_A 431 KEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILIVGGS 510 (655)
T ss_dssp HTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTT
T ss_pred hccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCc
Confidence 01599999999998 44 225454 999999999999
Q ss_pred CCCCChhhhhc
Q psy13414 147 FILEKPNLYIF 157 (161)
Q Consensus 147 s~~~Gf~~RL~ 157 (161)
|.||||..-|.
T Consensus 511 ski~g~~~~L~ 521 (655)
T 4am6_A 511 SKIPALDFILT 521 (655)
T ss_dssp CCCTTHHHHHH
T ss_pred ccCccHHHHHH
Confidence 99999987553
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.37 E-value=5.6e-13 Score=104.49 Aligned_cols=134 Identities=12% Similarity=0.164 Sum_probs=99.9
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+++++..|..+. ....++||+++++.|.+.+.++. .+ ..+.+.++++|+++|+...+...+. .
T Consensus 158 ttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~-~~--~~~~~~ae~~K~~l~~~~~~~~~~~----------~ 222 (344)
T 1jce_A 158 TTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETY-RV--AIGERTAERVKIEIGNVFPSKENDE----------L 222 (344)
T ss_dssp CEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHH-CE--ECCHHHHHHHHHHHCBCSCCHHHHH----------C
T ss_pred eEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHh-Cc--ccCHHHHHHHHHHHhccCccccCCc----------c
Confidence 58999999998764 46789999999999999997641 11 1235788999999998765532111 1
Q ss_pred EEEC-----CCCc--EEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhh-cCeEEecCCCCCCChh
Q psy13414 82 SYEL-----PDGQ--VITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLY-ANTVLSGVLFILEKPN 153 (161)
Q Consensus 82 ~y~l-----pdg~--~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~-~nIvl~GG~s~~~Gf~ 153 (161)
.+++ .+|. .+.+..++|. .+|+|.. ..+.++|.+++.+++.+.+..++ ++|+|+||+|++|||.
T Consensus 223 ~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~ 294 (344)
T 1jce_A 223 ETTVSGIDLSTGLPRKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLD 294 (344)
T ss_dssp EEEEEEEETTTTEEEEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHH
T ss_pred eEEEeccccCCCCceeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHH
Confidence 2333 3664 4566666553 3555532 37889999999999999888888 7999999999999999
Q ss_pred hhhcc
Q psy13414 154 LYIFG 158 (161)
Q Consensus 154 ~RL~~ 158 (161)
+||..
T Consensus 295 ~~l~~ 299 (344)
T 1jce_A 295 TLLQK 299 (344)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99854
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=98.46 E-value=3.4e-08 Score=78.18 Aligned_cols=120 Identities=14% Similarity=0.132 Sum_probs=76.4
Q ss_pred eEeccchHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHHHhhhcccccccHHHHHHHhhcCCCCccEEECCCC
Q psy13414 19 LRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDG 88 (161)
Q Consensus 19 ~~~~~gG~~lt~~l~~ll~~~-----~~~~~~~-----~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~~y~lpdg 88 (161)
...++||+++++.|.+++.++ +.++... .-.+.++++|++++..... .. .....+..++|
T Consensus 223 ~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~------~i----~i~~~~~~~~G 292 (383)
T 1dkg_D 223 GDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQT------DV----NLPYITADATG 292 (383)
T ss_dssp EESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEE------EE----EEEEEEEETTE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCce------EE----EEecccccCCC
Confidence 456999999999999988664 3333221 1235677888887754310 00 00112344555
Q ss_pred -c--EEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhcc
Q psy13414 89 -Q--VITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 89 -~--~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~ 158 (161)
. .+.+..++|. -+|.|.. ..+.++|.+++.+++. +....++|+|+||+|++||+.++|..
T Consensus 293 ~~~~~~~it~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~ 355 (383)
T 1dkg_D 293 PKHMNIKVTRAKLE---SLVEDLV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAE 355 (383)
T ss_dssp EEEEEEEEEHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHH
T ss_pred CeeEEEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHH
Confidence 2 2355555442 3454432 3678889999988863 34567899999999999999998853
No 10
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.44 E-value=9.2e-08 Score=75.51 Aligned_cols=126 Identities=15% Similarity=0.152 Sum_probs=71.4
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+++.+.+|.+.. ....++||+++++.+.+.+ .+ +.+.++++|.++++...+..++ ..
T Consensus 202 ttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~~-----~~----~~~~aE~~K~~~~~~~~~~~~~----------~~ 260 (377)
T 2ych_A 202 STSLVLLRGDKPLA--VRVLTLSGKDFTEAIARSF-----NL----DLLAAEEVKRTYGMATLPTEDE----------EL 260 (377)
T ss_dssp CEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHT-----TC----CHHHHHHHHHHTC---------------------
T ss_pred cEEEEEEECCEEEE--EEeeechHHHHHHHHHHHh-----CC----CHHHHHHHHhhccccccccccc----------cc
Confidence 57888999998764 4678999999999988732 11 2567889999888755322111 01
Q ss_pred EEECCCCcEEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 82 SYELPDGQVITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 82 ~y~lpdg~~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
.+++|+ ..+.+..+.+ .|++ .|. ...+.+.|.+++..++...+....++|+|+||+|++||+.++|.
T Consensus 261 ~i~~~~-~~~~i~~~~~--~~~i-~~~-----~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~ 327 (377)
T 2ych_A 261 LLDFDA-ERERYSPGRI--YDAI-RPV-----LVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLT 327 (377)
T ss_dssp ---------------CH--HHHH-HHH-----HHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHH
T ss_pred cccccc-ccccCCHHHH--HHHH-HHH-----HHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHH
Confidence 122332 2223332221 1111 111 12566777777776655566778899999999999999999874
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=98.23 E-value=1.3e-06 Score=65.77 Aligned_cols=99 Identities=11% Similarity=-0.015 Sum_probs=71.0
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|.++++.+|.++. ....++||.++++.+.+.+.- +.+.++++|++++. . .+...
T Consensus 150 st~~~~~~~g~~~~--~~~~~~Gg~~~~~~l~~~l~~---------~~~~ae~~k~~~~~--~---~~~~~--------- 204 (272)
T 3h1q_A 150 TTGIAVIEKGKITA--TFDEPTGGTHLSLVLAGSYKI---------PFEEAETIKKDFSR--H---REIMR--------- 204 (272)
T ss_dssp CEEEEEEETTEEEE--ECCBSCCHHHHHHHHHHHHTC---------CHHHHHHHHHSSTT--H---HHHHH---------
T ss_pred cEEEEEEECCEEEE--EecCCCcHHHHHHHHHHHhCC---------CHHHHHHHHHhcCC--H---HHHHH---------
Confidence 58899999998873 467899999999999988751 24677888888661 0 11110
Q ss_pred EEECCCCcEEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhcc
Q psy13414 82 SYELPDGQVITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 82 ~y~lpdg~~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~ 158 (161)
+.+.++ ..+.+.|.+++.+++ ..++|+|+||+|++|||.++|..
T Consensus 205 ------------------~~~~~~---------~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~ 248 (272)
T 3h1q_A 205 ------------------VVRPVI---------EKMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSR 248 (272)
T ss_dssp ------------------HHHHHH---------HHHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHH
T ss_pred ------------------HHHHHH---------HHHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHH
Confidence 111111 256777888888776 24599999999999999999854
No 12
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=98.14 E-value=9.6e-07 Score=72.67 Aligned_cols=131 Identities=15% Similarity=0.178 Sum_probs=79.3
Q ss_pred eeEEEEee--CCcc-cccceeEeccchHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHHHhhhcccccccHHH
Q psy13414 2 MINTSSLI--TSYA-LPHAILRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRDIKEKLCYVALDFEQ 68 (161)
Q Consensus 2 ~T~v~PV~--dG~~-l~~~~~~~~~gG~~lt~~l~~ll~~~-----~~~~~~~-----~~~~~~~~iKe~~~~v~~~~~~ 68 (161)
+|+|+.+- +|.. +.......++||+++++.|.+.+.++ +.++... .-++.++.+|+.++....
T Consensus 172 T~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~---- 247 (509)
T 2v7y_A 172 TFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ---- 247 (509)
T ss_dssp CEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSE----
T ss_pred eEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCc----
Confidence 35555443 3533 23233456899999999999988653 3333211 113566777777765321
Q ss_pred HHHHhhcCCCCccEEECC------CC---cEEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcC
Q psy13414 69 EMATAASSSSLEKSYELP------DG---QVITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYAN 139 (161)
Q Consensus 69 e~~~~~~~~~~~~~y~lp------dg---~~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~n 139 (161)
..+++| +| ..+.+..++| |-+|.|-. ..+.+.|.+++..+.. .....++
T Consensus 248 ------------~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i~~ 305 (509)
T 2v7y_A 248 ------------TQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV-----ERTMGPVRQALQDAGL--TPADIDK 305 (509)
T ss_dssp ------------EEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH-----HTTHHHHHHHHHHHTC--CGGGCSE
T ss_pred ------------EEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhHCcE
Confidence 122222 33 2234544444 23444422 3677888888887653 3456799
Q ss_pred eEEecCCCCCCChhhhhcc
Q psy13414 140 TVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 140 Ivl~GG~s~~~Gf~~RL~~ 158 (161)
|+|+||+|++|++.++|..
T Consensus 306 VvLvGG~s~~p~v~~~l~~ 324 (509)
T 2v7y_A 306 VILVGGSTRIPAVQEAIKR 324 (509)
T ss_dssp EEEESGGGGCHHHHHHHHH
T ss_pred EEEECCcccChHHHHHHHH
Confidence 9999999999999998753
No 13
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=97.87 E-value=1.6e-05 Score=63.96 Aligned_cols=125 Identities=10% Similarity=0.021 Sum_probs=72.3
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccccccHHHHHHHhhcCCCCcc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEK 81 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~ 81 (161)
+|+++-+.+|.+.. ....++||+++|+.+.+.+.- +.+.++.+|.++.....+. ....
T Consensus 217 ttdisi~~~g~~~~--~~~i~~GG~~it~dIa~~l~~---------~~~~AE~iK~~~g~a~~~~-----------~~~~ 274 (419)
T 4a2a_A 217 FTGLIAYKNGVPIK--ISYVPVGMKHVIKDVSAVLDT---------SFEESERLIITHGNAVYND-----------LKEE 274 (419)
T ss_dssp SEEEEEEETTEEEE--EEEESCCHHHHHHHHHHHHTC---------CHHHHHHHHHHHCCSCCTT-----------CCCC
T ss_pred cEEEEEEECCEEEE--EEecccHHHHHHHHHHHHHCC---------CHHHHHHHHHHhccCcccC-----------CCCc
Confidence 57788888888765 457899999999999876532 3567889998876432210 1122
Q ss_pred EEECCC--C-cEEeecCee-ccccccCcCCCCCCCCCCCHHHHHHHHHHcCCH---HH-HHHhhcCeEEecCCCCCCChh
Q psy13414 82 SYELPD--G-QVITIGNER-FRCPEALFQPAFLGMEACGIHETTYNSIMKCDV---DI-RKDLYANTVLSGVLFILEKPN 153 (161)
Q Consensus 82 ~y~lpd--g-~~i~l~~er-~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~---d~-r~~l~~nIvl~GG~s~~~Gf~ 153 (161)
.+++|. | ....+..+. ..+.+..+ ..+.+.|.++|..... +. ...+.+.|+|+||+|++||+.
T Consensus 275 ~i~v~~~~~~~~~~is~~~l~~ii~p~v---------eei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~ 345 (419)
T 4a2a_A 275 EIQYRGLDGNTIKTTTAKKLSVIIHARL---------REIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRIN 345 (419)
T ss_dssp EEEEECTTSCSEEEEEHHHHHHHHHHHH---------HHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHH
T ss_pred eEEEeecCCccceEEcHHHHHHHHHHHH---------HHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHH
Confidence 333332 1 122222211 11111111 2455566666655432 22 345778899999999999999
Q ss_pred hhhc
Q psy13414 154 LYIF 157 (161)
Q Consensus 154 ~RL~ 157 (161)
+.+.
T Consensus 346 e~~~ 349 (419)
T 4a2a_A 346 ELAT 349 (419)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 14
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.59 E-value=1.3e-05 Score=63.20 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhcc
Q psy13414 116 GIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 116 ~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~ 158 (161)
.+.+.|.++|.++..+ ....++|+|+||+|++||+.++|..
T Consensus 325 ~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~ 365 (394)
T 3qfu_A 325 KTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLES 365 (394)
T ss_dssp HTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHH
Confidence 5677888888776543 4567999999999999999998854
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=97.13 E-value=0.00021 Score=59.94 Aligned_cols=113 Identities=17% Similarity=0.216 Sum_probs=65.7
Q ss_pred eEeccchHHHHHHHHHHHHhc-----CCCCCch-----hHHHHHHHHhhhcccccccHHHHHHHhhcCCCCccEEECC--
Q psy13414 19 LRLDLAGRDLTDYLMKILTER-----GYSFTTT-----AEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP-- 86 (161)
Q Consensus 19 ~~~~~gG~~lt~~l~~ll~~~-----~~~~~~~-----~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~~y~lp-- 86 (161)
...++||+++++.|.+.+.++ +.++... .-.+.++.+|+.++... ...+.+|
T Consensus 223 gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~----------------~~~i~l~~~ 286 (605)
T 2kho_A 223 GDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ----------------QTDVNLPYI 286 (605)
T ss_dssp EESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------EEEEEEEEE
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEeccc
Confidence 346899999999999887653 3333211 01244556666654321 1122222
Q ss_pred ----CC-c--EEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 87 ----DG-Q--VITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 87 ----dg-~--~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
+| . .+.+..+.| |-+|.|-. ..+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.++|.
T Consensus 287 ~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~ 354 (605)
T 2kho_A 287 TADATGPKHMNIKVTRAKL---ESLVEDLV-----NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVA 354 (605)
T ss_dssp EEETTEEEEEEEEEEHHHH---HTTCCSTT-----GGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHH
T ss_pred ccCCCCceEEEEEEeHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHH
Confidence 23 1 124443333 34454432 2456677888877642 2334589999999999999998874
No 16
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=97.11 E-value=0.00017 Score=59.86 Aligned_cols=122 Identities=17% Similarity=0.212 Sum_probs=65.8
Q ss_pred CCcc-cccceeEeccchHHHHHHHHHHHHh-----cCCCCCch-----hHHHHHHHHhhhcccccccHHHHHHHhhcCCC
Q psy13414 10 TSYA-LPHAILRLDLAGRDLTDYLMKILTE-----RGYSFTTT-----AEREIVRDIKEKLCYVALDFEQEMATAASSSS 78 (161)
Q Consensus 10 dG~~-l~~~~~~~~~gG~~lt~~l~~ll~~-----~~~~~~~~-----~~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~ 78 (161)
+|.. +........+||+++++.|.+.+.+ .+.++... .-.+.++.+|+.++...
T Consensus 214 ~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~--------------- 278 (554)
T 1yuw_A 214 AGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST--------------- 278 (554)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS---------------
T ss_pred CCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc---------------
Confidence 4643 2223445689999999999888753 22233211 01244555666554321
Q ss_pred CccEEECC---CCc--EEeecCeeccccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChh
Q psy13414 79 LEKSYELP---DGQ--VITIGNERFRCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPN 153 (161)
Q Consensus 79 ~~~~y~lp---dg~--~i~l~~er~~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~ 153 (161)
...+.++ +|. .+.+..+.| |-++.|-. ..+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.
T Consensus 279 -~~~i~i~~~~~g~~~~~~ltr~~~---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~ 347 (554)
T 1yuw_A 279 -QASIEIDSLYEGIDFYTSITRARF---EELNADLF-----RGTLDPVEKALRDAKL--DKSQIHDIVLVGGSTRIPKIQ 347 (554)
T ss_dssp -EEEEEETTCSSSCCEEEEEEHHHH---HHHTHHHH-----HHTTHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHH
T ss_pred -eEEEEEeeccCCceEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhhCcEEEEECCcccChHHH
Confidence 1223332 333 233333333 22332211 1344566666665422 234568999999999999999
Q ss_pred hhhc
Q psy13414 154 LYIF 157 (161)
Q Consensus 154 ~RL~ 157 (161)
++|.
T Consensus 348 ~~l~ 351 (554)
T 1yuw_A 348 KLLQ 351 (554)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8874
No 17
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.85 E-value=0.00042 Score=54.88 Aligned_cols=41 Identities=17% Similarity=0.140 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhcc
Q psy13414 116 GIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIFG 158 (161)
Q Consensus 116 ~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~~ 158 (161)
.+.+.|.+++..+.. .....+.|+|+||+|++|++.++|..
T Consensus 333 ~i~~~i~~~l~~~~~--~~~~i~~VvLvGG~s~~p~l~~~l~~ 373 (404)
T 3i33_A 333 GTLEPVEKALRDAKL--DKGQIQEIVLVGGSTRIPKIQKLLQD 373 (404)
T ss_dssp HTHHHHHHHHHHHTC--CGGGCCEEEEESGGGGCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC--CHhhCCEEEEECCccccHHHHHHHHH
Confidence 556777777776533 23456889999999999999998853
No 18
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.72 E-value=0.00098 Score=56.67 Aligned_cols=112 Identities=9% Similarity=0.119 Sum_probs=61.2
Q ss_pred eEeccchHHHHHHHHHHHHh-----cCCCCCch-h----HHHHHHHHhhhcccccccHHHHHHHhhcCCCCccEEECC--
Q psy13414 19 LRLDLAGRDLTDYLMKILTE-----RGYSFTTT-A----EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP-- 86 (161)
Q Consensus 19 ~~~~~gG~~lt~~l~~ll~~-----~~~~~~~~-~----~~~~~~~iKe~~~~v~~~~~~e~~~~~~~~~~~~~y~lp-- 86 (161)
....+||+++++.|.+.+.+ .+.++... . -++.++.+|+.++... ...+.++
T Consensus 228 gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~----------------~~~i~i~~~ 291 (675)
T 3d2f_A 228 CDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT----------------NAPFSVESV 291 (675)
T ss_dssp EETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS----------------EEEEEETTS
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC----------------ceEEEEeee
Confidence 34689999999999998853 22222110 0 0234555565543211 1122222
Q ss_pred -CCc--EEeecCeec-cccccCcCCCCCCCCCCCHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 87 -DGQ--VITIGNERF-RCPEALFQPAFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 87 -dg~--~i~l~~er~-~~~E~LF~p~~~~~~~~~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
+|. .+.+..+.| ...+.+|+ .+.+.|.+++..+.. ...-.+.|+|+||+|.+|++.++|.
T Consensus 292 ~~g~~~~~~itr~~fe~l~~~l~~---------~i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v~~~l~ 355 (675)
T 3d2f_A 292 MNDVDVSSQLSREELEELVKPLLE---------RVTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTLKQSIS 355 (675)
T ss_dssp SSSCCEEEEEEHHHHHHHTHHHHT---------TTTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHHHHHHH
T ss_pred ccCceEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHHHHHHH
Confidence 122 334444333 12233332 455666676665421 1223579999999999999999874
No 19
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=95.63 E-value=0.0024 Score=50.66 Aligned_cols=40 Identities=10% Similarity=0.026 Sum_probs=29.9
Q ss_pred CHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 116 GIHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 116 ~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
.+.++|.+.+.+... .....+.|+|+||+|.+|++.++|.
T Consensus 326 ~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~s~~p~v~~~l~ 365 (409)
T 4gni_A 326 GFNRLVESAVKKAGL--DPLDVDEVIMSGGTSNTPRIAANFR 365 (409)
T ss_dssp HHHHHHHHHHHHTTC--CGGGCCEEEEESGGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC--CHHHCCEEEEECCccccHHHHHHHH
Confidence 566677777765532 2344688999999999999999875
No 20
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=95.15 E-value=0.076 Score=44.04 Aligned_cols=50 Identities=18% Similarity=0.136 Sum_probs=35.5
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 62 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v 62 (161)
+|++.-+.+|..+. ...+++||+.+|+.+..-|.-. +.+.+|+||. ++..
T Consensus 418 TTd~sVf~~G~lv~--a~~ip~gG~~VT~DIA~~Lgt~--------d~~~AErIK~-YG~A 467 (610)
T 2d0o_A 418 STDASIINPKGDII--ATHLAGAGDMVTMIIARELGLE--------DRYLAEEIKK-YPLA 467 (610)
T ss_dssp EEEEEEECTTCCEE--EEEEECSHHHHHHHHHHHHTCC--------CHHHHHHHHH-SCEE
T ss_pred cceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCCC--------CHHHHHHhcc-cCce
Confidence 45665555665544 3468999999999998887631 3678999998 6543
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=95.14 E-value=0.017 Score=44.92 Aligned_cols=38 Identities=8% Similarity=0.082 Sum_probs=28.3
Q ss_pred eeEEEEee--CCcccccceeEeccchHHHHHHHHHHHHhc
Q psy13414 2 MINTSSLI--TSYALPHAILRLDLAGRDLTDYLMKILTER 39 (161)
Q Consensus 2 ~T~v~PV~--dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~ 39 (161)
+|+|+-+. +|.++.......++||+++++.+.+.++++
T Consensus 201 TtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 201 TTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp CEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 45566555 576555556788999999999998888764
No 22
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=94.61 E-value=0.016 Score=45.46 Aligned_cols=38 Identities=3% Similarity=0.024 Sum_probs=30.8
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTER 39 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~ 39 (161)
+|.++-+.+|.+.......+++||..+.+.+.+.+.+.
T Consensus 195 Ttd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 195 TTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred cEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 46777777777887778889999999999999999875
No 23
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=94.34 E-value=0.1 Score=43.37 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=35.5
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHHhhhcccc
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYV 62 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~iKe~~~~v 62 (161)
+|++.-+.+|..+. ...+++||+.+|..+..-|.-. +.+.+|+||. ++..
T Consensus 420 TTd~sVf~~g~lv~--a~~ip~gG~~VT~DIA~~Lg~~--------d~~~AErIK~-YG~A 469 (607)
T 1nbw_A 420 STDAAIVNAEGQIT--AVHLAGAGNMVSLLIKTELGLE--------DLSLAEAIKK-YPLA 469 (607)
T ss_dssp EEEEEEECSSSCEE--EEEEECCHHHHHHHHHHHHTCS--------CHHHHHHHHH-SCEE
T ss_pred cceEEEEcCCcEEE--EEEeccchHHHHHHHHHHhCCC--------CHHHHHHhcc-cCce
Confidence 45665556665544 3468999999999998887631 3678999998 6543
No 24
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=80.24 E-value=0.53 Score=34.94 Aligned_cols=26 Identities=15% Similarity=-0.041 Sum_probs=21.5
Q ss_pred HHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 132 IRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 132 ~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
.+....+.|+++||+|..|++.++|.
T Consensus 202 ~~~~~~~~vvl~GGva~n~~lr~~l~ 227 (276)
T 4ehu_A 202 KRIGVQRNVVMVGGVARNSGIVRAMA 227 (276)
T ss_dssp HHHCCCSSEEEESGGGGCHHHHHHHH
T ss_pred HhcccCCeEEEecCccchHHHHHHHH
Confidence 34455688999999999999998874
No 25
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=79.33 E-value=0.95 Score=37.79 Aligned_cols=39 Identities=8% Similarity=-0.038 Sum_probs=26.4
Q ss_pred HHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCCCChhhhhc
Q psy13414 117 IHETTYNSIMKCDVDIRKDLYANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 117 l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
+.+.|.+++..... ...-.+.|+|+||+|.+|++.++|.
T Consensus 316 i~~~v~~~L~~a~~--~~~~i~~VvLvGG~sriP~v~~~l~ 354 (605)
T 4b9q_A 316 SIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVA 354 (605)
T ss_dssp TTHHHHHHHHHTTC--CGGGCSEEEEESGGGGSHHHHHHHH
T ss_pred HHHHHHHHHHHcCC--CHHHCcEEEEeCCccCchHHHHHHH
Confidence 34455555554322 1223578999999999999999874
No 26
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=62.40 E-value=9.7 Score=28.65 Aligned_cols=53 Identities=11% Similarity=0.101 Sum_probs=36.0
Q ss_pred eeEEEEeeCCcc-cccceeEeccchHHHHHHHHHHHHhcCCCCCchhHHHHHHHH-hhh
Q psy13414 2 MINTSSLITSYA-LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI-KEK 58 (161)
Q Consensus 2 ~T~v~PV~dG~~-l~~~~~~~~~gG~~lt~~l~~ll~~~~~~~~~~~~~~~~~~i-Ke~ 58 (161)
+|+++-+.+|.+ +.......++||+++++.+.+.+.+.+.. .+.+.++++ |.+
T Consensus 175 ttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~~----i~~~~ae~~lk~~ 229 (320)
T 2zgy_A 175 TLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLARTK----GSSYLADDIIIHR 229 (320)
T ss_dssp CEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSBG----GGHHHHHHHHHTT
T ss_pred eEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCCC----CCHHHHHHHHHHh
Confidence 467777777776 33345677999999999999999764222 233455665 554
No 27
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=59.58 E-value=1.1 Score=34.37 Aligned_cols=37 Identities=16% Similarity=0.047 Sum_probs=30.1
Q ss_pred eeEEEEeeCCcccccceeEeccchHHHHHHHHHHHHh
Q psy13414 2 MINTSSLITSYALPHAILRLDLAGRDLTDYLMKILTE 38 (161)
Q Consensus 2 ~T~v~PV~dG~~l~~~~~~~~~gG~~lt~~l~~ll~~ 38 (161)
+|+++-+.+|.+........++||+.+++.+.+.+++
T Consensus 183 Ttd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~ 219 (329)
T 4apw_A 183 NMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTD 219 (329)
T ss_dssp CEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSS
T ss_pred cEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHh
Confidence 5777777888877666678899999999998887776
No 28
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=56.76 E-value=4 Score=33.60 Aligned_cols=32 Identities=34% Similarity=0.690 Sum_probs=25.6
Q ss_pred cEEECCCCcE----EeecCeeccccccCcCCCCCCC
Q psy13414 81 KSYELPDGQV----ITIGNERFRCPEALFQPAFLGM 112 (161)
Q Consensus 81 ~~y~lpdg~~----i~l~~er~~~~E~LF~p~~~~~ 112 (161)
..+.+|++.. +.++.|++.+||.||+|+.++.
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~ 369 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGI 369 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCC
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcc
Confidence 3466788754 5789999999999999987653
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=48.07 E-value=10 Score=28.90 Aligned_cols=15 Identities=13% Similarity=0.036 Sum_probs=12.9
Q ss_pred HhhcCeEEecCCCCC
Q psy13414 135 DLYANTVLSGVLFIL 149 (161)
Q Consensus 135 ~l~~nIvl~GG~s~~ 149 (161)
++...|+|+||++++
T Consensus 277 ~~~~~IvltGGGA~l 291 (329)
T 4apw_A 277 DQLDSLIFIGGTTQK 291 (329)
T ss_dssp TSCSEEEEESTTHHH
T ss_pred HHccEEEEECChHHH
Confidence 346899999999997
No 30
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=34.52 E-value=24 Score=24.44 Aligned_cols=25 Identities=20% Similarity=-0.149 Sum_probs=15.5
Q ss_pred CHHHHHHHHHHcCCHHHHHHhhcCeEEecCCCCC
Q psy13414 116 GIHETTYNSIMKCDVDIRKDLYANTVLSGVLFIL 149 (161)
Q Consensus 116 ~l~~~i~~si~~~~~d~r~~l~~nIvl~GG~s~~ 149 (161)
-|.+++.+++.. ++=||.|||++.-
T Consensus 51 ~I~~~l~~a~~~---------~DlVittGG~g~~ 75 (172)
T 3kbq_A 51 EIGWAFRVALEV---------SDLVVSSGGLGPT 75 (172)
T ss_dssp HHHHHHHHHHHH---------CSEEEEESCCSSS
T ss_pred HHHHHHHHHHhc---------CCEEEEcCCCcCC
Confidence 455555555443 3448999998763
No 31
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=34.42 E-value=25 Score=23.94 Aligned_cols=25 Identities=24% Similarity=0.137 Sum_probs=15.3
Q ss_pred CCHHHHHHHHHH-cCCHHHHHHhhcCeEEecCCCC
Q psy13414 115 CGIHETTYNSIM-KCDVDIRKDLYANTVLSGVLFI 148 (161)
Q Consensus 115 ~~l~~~i~~si~-~~~~d~r~~l~~nIvl~GG~s~ 148 (161)
..|.+++.+++. .+| =||.|||+|.
T Consensus 53 ~~i~~al~~a~~~~~D---------lVittGG~s~ 78 (164)
T 3pzy_A 53 SPVGEALRKAIDDDVD---------VILTSGGTGI 78 (164)
T ss_dssp HHHHHHHHHHHHTTCS---------EEEEESCCSS
T ss_pred HHHHHHHHHHHhCCCC---------EEEECCCCCC
Confidence 345555555553 333 3888999875
No 32
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=33.04 E-value=25 Score=23.99 Aligned_cols=9 Identities=22% Similarity=0.084 Sum_probs=7.4
Q ss_pred eEEecCCCC
Q psy13414 140 TVLSGVLFI 148 (161)
Q Consensus 140 Ivl~GG~s~ 148 (161)
||.|||++.
T Consensus 76 VittGG~g~ 84 (169)
T 1y5e_A 76 VLTNGGTGI 84 (169)
T ss_dssp EEEECCCSS
T ss_pred EEEcCCCCC
Confidence 888899875
No 33
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=32.44 E-value=28 Score=23.57 Aligned_cols=24 Identities=13% Similarity=-0.155 Sum_probs=15.1
Q ss_pred CHHHHHHHHHH--cCCHHHHHHhhcCeEEecCCCC
Q psy13414 116 GIHETTYNSIM--KCDVDIRKDLYANTVLSGVLFI 148 (161)
Q Consensus 116 ~l~~~i~~si~--~~~~d~r~~l~~nIvl~GG~s~ 148 (161)
-|.+++.+++. .+| =||.|||++.
T Consensus 49 ~i~~~l~~~~~~~~~D---------lVittGG~g~ 74 (164)
T 2is8_A 49 MIKKVLRLWADREGLD---------LILTNGGTGL 74 (164)
T ss_dssp HHHHHHHHHHHTSCCS---------EEEEESCCSS
T ss_pred HHHHHHHHHHhcCCCC---------EEEEcCCCCC
Confidence 45566666554 333 3889999875
No 34
>1uvq_C Orexin; immunology, MHC class II, diabetes, narcolepsy, autoimmune disease, structural proteomics in europe, spine, structural genomics; HET: NAG FUC BMA; 1.8A {Homo sapiens}
Probab=31.80 E-value=12 Score=17.88 Aligned_cols=10 Identities=10% Similarity=0.086 Sum_probs=7.3
Q ss_pred EEecCCCCCC
Q psy13414 141 VLSGVLFILE 150 (161)
Q Consensus 141 vl~GG~s~~~ 150 (161)
-++||.|++|
T Consensus 17 aVtgggslvp 26 (33)
T 1uvq_C 17 AVGGGGSLVP 26 (33)
T ss_pred EecCCceeee
Confidence 4678888776
No 35
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=30.64 E-value=29 Score=23.98 Aligned_cols=10 Identities=10% Similarity=-0.134 Sum_probs=7.9
Q ss_pred eEEecCCCCC
Q psy13414 140 TVLSGVLFIL 149 (161)
Q Consensus 140 Ivl~GG~s~~ 149 (161)
||.+||+|.=
T Consensus 85 VittGG~s~g 94 (178)
T 2pjk_A 85 IISTGGTGYS 94 (178)
T ss_dssp EEEESCCSSS
T ss_pred EEECCCCCCC
Confidence 8889998753
No 36
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=30.24 E-value=32 Score=23.69 Aligned_cols=25 Identities=16% Similarity=-0.011 Sum_probs=15.7
Q ss_pred CHHHHHHHHHH--cCCHHHHHHhhcCeEEecCCCCC
Q psy13414 116 GIHETTYNSIM--KCDVDIRKDLYANTVLSGVLFIL 149 (161)
Q Consensus 116 ~l~~~i~~si~--~~~~d~r~~l~~nIvl~GG~s~~ 149 (161)
-|.+++.+++. .+| =||.|||++.-
T Consensus 55 ~I~~~l~~~~~~~~~D---------lVittGG~g~g 81 (178)
T 2pbq_A 55 LIEKTLIELADEKGCS---------LILTTGGTGPA 81 (178)
T ss_dssp HHHHHHHHHHHTSCCS---------EEEEESCCSSS
T ss_pred HHHHHHHHHHhcCCCC---------EEEECCCCCCC
Confidence 45566666554 333 38899998753
No 37
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=29.79 E-value=32 Score=23.99 Aligned_cols=9 Identities=11% Similarity=-0.027 Sum_probs=7.6
Q ss_pred eEEecCCCC
Q psy13414 140 TVLSGVLFI 148 (161)
Q Consensus 140 Ivl~GG~s~ 148 (161)
||.|||++.
T Consensus 82 VIttGGtg~ 90 (189)
T 1jlj_A 82 ILTTGGTGF 90 (189)
T ss_dssp EEEESCCSS
T ss_pred EEEcCCCCC
Confidence 888999875
No 38
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=27.11 E-value=40 Score=23.03 Aligned_cols=10 Identities=10% Similarity=0.149 Sum_probs=7.8
Q ss_pred eEEecCCCCC
Q psy13414 140 TVLSGVLFIL 149 (161)
Q Consensus 140 Ivl~GG~s~~ 149 (161)
||.|||++.-
T Consensus 73 VittGG~g~~ 82 (172)
T 1mkz_A 73 VLITGGTGLT 82 (172)
T ss_dssp EEEESCCSSS
T ss_pred EEeCCCCCCC
Confidence 8888998753
No 39
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=26.48 E-value=41 Score=22.78 Aligned_cols=24 Identities=13% Similarity=0.083 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHc-CCHHHHHHhhcCeEEecCCCC
Q psy13414 116 GIHETTYNSIMK-CDVDIRKDLYANTVLSGVLFI 148 (161)
Q Consensus 116 ~l~~~i~~si~~-~~~d~r~~l~~nIvl~GG~s~ 148 (161)
.|.+++.+++.. + +=||.|||++.
T Consensus 57 ~I~~~l~~a~~~~~---------DlVittGG~g~ 81 (167)
T 2g2c_A 57 TVVEAIATALKQGA---------RFIITAGGTGI 81 (167)
T ss_dssp HHHHHHHHHHHTTC---------SEEEEESCCSS
T ss_pred HHHHHHHHHHhCCC---------CEEEECCCCCC
Confidence 455555555542 3 33889999875
No 40
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.30 E-value=38 Score=23.68 Aligned_cols=11 Identities=18% Similarity=-0.091 Sum_probs=8.4
Q ss_pred cCeEEecCCCC
Q psy13414 138 ANTVLSGVLFI 148 (161)
Q Consensus 138 ~nIvl~GG~s~ 148 (161)
+=||.|||+|.
T Consensus 91 DlVIttGGts~ 101 (185)
T 3rfq_A 91 DLVVSVGGTGV 101 (185)
T ss_dssp SEEEEESCCSS
T ss_pred CEEEECCCCCC
Confidence 33888999885
No 41
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=25.67 E-value=43 Score=22.64 Aligned_cols=9 Identities=11% Similarity=-0.160 Sum_probs=7.6
Q ss_pred eEEecCCCC
Q psy13414 140 TVLSGVLFI 148 (161)
Q Consensus 140 Ivl~GG~s~ 148 (161)
||.|||+|.
T Consensus 75 VittGG~g~ 83 (167)
T 1uuy_A 75 ILTLGGTGF 83 (167)
T ss_dssp EEEESCCSS
T ss_pred EEECCCCCC
Confidence 888999875
No 42
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=25.36 E-value=17 Score=27.68 Aligned_cols=21 Identities=14% Similarity=0.036 Sum_probs=17.5
Q ss_pred hcCeEEecCCCCCCChhhhhc
Q psy13414 137 YANTVLSGVLFILEKPNLYIF 157 (161)
Q Consensus 137 ~~nIvl~GG~s~~~Gf~~RL~ 157 (161)
.++|+++||+++=..+.++|.
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~ 265 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLR 265 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHH
Confidence 468999999998887877765
No 43
>4f02_C Eukaryotic translation initiation factor 4 gamma; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens}
Probab=22.89 E-value=34 Score=15.61 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=11.1
Q ss_pred eEeccchHHHHHHHH
Q psy13414 19 LRLDLAGRDLTDYLM 33 (161)
Q Consensus 19 ~~~~~gG~~lt~~l~ 33 (161)
+--+-||+++|..+.
T Consensus 6 rdpnqggkditeeim 20 (27)
T 4f02_C 6 RDPNQGGKDITEEIM 20 (27)
T ss_pred cCccccchhhHHHHH
Confidence 345778999998764
No 44
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=22.48 E-value=53 Score=23.04 Aligned_cols=9 Identities=11% Similarity=-0.138 Sum_probs=7.5
Q ss_pred eEEecCCCC
Q psy13414 140 TVLSGVLFI 148 (161)
Q Consensus 140 Ivl~GG~s~ 148 (161)
||.|||++.
T Consensus 70 VitTGGtg~ 78 (195)
T 1di6_A 70 VLTTGGTGP 78 (195)
T ss_dssp EEEESCCSS
T ss_pred EEECCCCCC
Confidence 888999875
Done!