Query psy13415
Match_columns 79
No_of_seqs 137 out of 1245
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 18:53:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13415.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13415hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 4E-21 1.4E-25 122.6 9.1 78 2-79 67-146 (510)
2 2lnl_A C-X-C chemokine recepto 99.8 4E-20 1.4E-24 110.6 10.2 77 1-79 42-118 (296)
3 2rh1_A Beta-2-adrenergic recep 99.8 2.7E-20 9.3E-25 118.3 9.8 78 1-78 71-148 (500)
4 3rze_A Histamine H1 receptor, 99.8 6.7E-20 2.3E-24 114.2 10.2 78 1-78 39-116 (452)
5 2ks9_A Substance-P receptor; w 99.8 8.5E-20 2.9E-24 111.4 10.3 79 1-79 63-141 (364)
6 3uon_A Human M2 muscarinic ace 99.8 6.9E-20 2.3E-24 114.5 9.9 78 1-78 54-131 (467)
7 1u19_A Rhodopsin; G protein-co 99.8 1.7E-19 5.9E-24 109.1 10.2 79 1-79 69-147 (349)
8 3vw7_A Proteinase-activated re 99.8 2.1E-19 7.3E-24 112.8 9.4 77 1-78 51-128 (484)
9 4amj_A Beta-1 adrenergic recep 99.8 3.4E-20 1.2E-24 110.7 5.4 78 1-78 42-119 (315)
10 4dkl_A MU-type opioid receptor 99.8 1.6E-19 5.4E-24 112.6 8.5 77 1-78 48-124 (464)
11 3pbl_A D(3) dopamine receptor, 99.8 7.3E-19 2.5E-23 110.3 9.2 78 1-78 69-147 (481)
12 3sn6_R Lysozyme, beta-2 adrene 99.8 3.2E-19 1.1E-23 113.6 6.3 78 1-78 213-290 (514)
13 3odu_A C-X-C chemokine recepto 99.8 1.3E-18 4.4E-23 109.6 8.9 76 1-78 79-154 (502)
14 4ea3_A Fusion protein of nocic 99.8 1.7E-18 5.8E-23 108.3 9.3 78 1-79 156-233 (434)
15 3v2y_A Sphingosine 1-phosphate 99.8 1.4E-18 4.9E-23 111.0 9.0 76 1-78 94-169 (520)
16 3eml_A Human adenosine A2A rec 99.8 2.3E-18 8E-23 107.9 9.0 76 1-78 52-127 (488)
17 2z73_A Rhodopsin; visual pigme 99.8 4.2E-18 1.4E-22 106.6 9.4 78 1-78 65-143 (448)
18 4eiy_A Adenosine receptor A2A/ 99.8 2.8E-18 9.7E-23 106.7 7.6 76 1-78 62-137 (447)
19 1hll_A Alpha-2A adrenergic rec 99.0 1.5E-10 5.3E-15 48.5 1.4 23 56-78 2-24 (32)
20 2ljb_A M2 protein, BM2 protein 34.7 28 0.00095 14.1 3.6 24 51-74 11-34 (35)
21 2rdd_B UPF0092 membrane protei 25.9 29 0.00098 14.1 1.0 12 68-79 16-27 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.85 E-value=4e-21 Score=122.58 Aligned_cols=78 Identities=21% Similarity=0.356 Sum_probs=71.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcccccC
Q psy13415 2 RTVTNYFLVNLSLADAMVSTLNVTFNFVYML--SSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEKK 79 (79)
Q Consensus 2 ~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~--~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~~ 79 (79)
|+++|+|++|||++|++++++.+|+.+.... .+.|.+|+..|++..++..++..+|++++++||+|||++|++|++++
T Consensus 67 ~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~ 146 (510)
T 4grv_A 67 QSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAK 146 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEecccccc
Confidence 4789999999999999999999999887654 35699999999999999999999999999999999999999999764
No 2
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.83 E-value=4e-20 Score=110.57 Aligned_cols=77 Identities=30% Similarity=0.510 Sum_probs=69.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcccccC
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEKK 79 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~~ 79 (79)
+|+++|+++.|||++|++.+ ..+|....... ++|..|+..|+...+....+..+|.+++++||+|||.+|++|++++
T Consensus 42 lrt~~n~~i~nLAvaDll~~-l~~p~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 118 (296)
T 2lnl_A 42 GRSVTDVYLLNLALADLLFA-LTLPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTL 118 (296)
T ss_dssp CCSTTHHHHHHHHHHHHHHH-HHHHHHHHHHH-SSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSS
T ss_pred CCChHHHHHHHHHHHHHHHH-HhhhHHHhhcc-CCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccc
Confidence 68999999999999999987 46777766555 4699999999999999999999999999999999999999999764
No 3
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.83 E-value=2.7e-20 Score=118.28 Aligned_cols=78 Identities=35% Similarity=0.535 Sum_probs=73.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..++..++..+|++++++||+|||.+|++|+++
T Consensus 71 l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~ 148 (500)
T 2rh1_A 71 LQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKY 148 (500)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTT
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcC
Confidence 578999999999999999998899999888888899999999999999999999999999999999999999999875
No 4
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.83 E-value=6.7e-20 Score=114.15 Aligned_cols=78 Identities=28% Similarity=0.548 Sum_probs=74.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.++..+|..+.....+.|.+|...|++..++..++..+|++++++|++|||++|++|+++
T Consensus 39 ~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 116 (452)
T 3rze_A 39 LHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRY 116 (452)
T ss_dssp TCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCT
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCcccc
Confidence 579999999999999999999999999988888899999999999999999999999999999999999999999975
No 5
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.83 E-value=8.5e-20 Score=111.36 Aligned_cols=79 Identities=38% Similarity=0.766 Sum_probs=73.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcccccC
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEKK 79 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~~ 79 (79)
+|+++|+++.|||++|++.++...|..+.....+.|.+|+..|++..+.......+|.+++++|++|||.+|++|+++|
T Consensus 63 l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 141 (364)
T 2ks9_A 63 MRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR 141 (364)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 5899999999999999999888899888777778899999999999999999999999999999999999999999864
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.82 E-value=6.9e-20 Score=114.47 Aligned_cols=78 Identities=29% Similarity=0.479 Sum_probs=74.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..++..++..+|.+++++||+|||++|++|+++
T Consensus 54 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~ 131 (467)
T 3uon_A 54 LQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTY 131 (467)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTS
T ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 478999999999999999999999999888888899999999999999999999999999999999999999999874
No 7
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.82 E-value=1.7e-19 Score=109.15 Aligned_cols=79 Identities=25% Similarity=0.344 Sum_probs=73.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcccccC
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEKK 79 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~~ 79 (79)
+|+++|+++.|||++|++.++...|..+.....+.|.+|+..|++..+....+..+|.+++++|++|||.+|++|++++
T Consensus 69 ~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~ 147 (349)
T 1u19_A 69 LRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNF 147 (349)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSC
T ss_pred hcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCccce
Confidence 5789999999999999999988899888777778899999999999999999999999999999999999999998764
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.81 E-value=2.1e-19 Score=112.76 Aligned_cols=77 Identities=23% Similarity=0.444 Sum_probs=67.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLS-SDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.++ .+|........ +.|.+|+..|++..++..++..+|++++++||+|||++|++|+++
T Consensus 51 l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~ 128 (484)
T 3vw7_A 51 VKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQS 128 (484)
T ss_dssp GCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--
T ss_pred cCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEccccc
Confidence 578999999999999999975 46666555544 489999999999999999999999999999999999999999875
No 9
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.81 E-value=3.4e-20 Score=110.73 Aligned_cols=78 Identities=31% Similarity=0.498 Sum_probs=73.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|+++.|||++|++.++...|..+.....+.|.+|+..|++..+....+..+|.+++++||+|||.+|++|.++
T Consensus 42 ~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~ 119 (315)
T 4amj_A 42 LQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRY 119 (315)
T ss_dssp GCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 478999999999999999988889988888888899999999999999999999999999999999999999999864
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.80 E-value=1.6e-19 Score=112.65 Aligned_cols=77 Identities=35% Similarity=0.616 Sum_probs=71.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|+++.|||++|++.++. +|..+.....+.|.+|...|++..++..++..+|++++++|++|||.+|++|+++
T Consensus 48 ~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 124 (464)
T 4dkl_A 48 MKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKA 124 (464)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 5799999999999999998865 8988888888899999999999999999999999999999999999999999864
No 11
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.79 E-value=7.3e-19 Score=110.28 Aligned_cols=78 Identities=32% Similarity=0.509 Sum_probs=72.2
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLS-SDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+++.+|..+..... +.|.+|...|++..++..++..+|++++++|++|||++|++|+++
T Consensus 69 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 147 (481)
T 3pbl_A 69 LQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHY 147 (481)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 579999999999999999998999988876665 579999999999999999999999999999999999999999864
No 12
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.78 E-value=3.2e-19 Score=113.61 Aligned_cols=78 Identities=35% Similarity=0.560 Sum_probs=73.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+++.+|..+.....+.|.+|+..|++..++..++..+|.+++++|++|||++|++|+++
T Consensus 213 lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~ 290 (514)
T 3sn6_R 213 LQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKY 290 (514)
T ss_dssp GCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccc
Confidence 479999999999999999988899999888888899999999999999999999999999999999999999999864
No 13
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.78 E-value=1.3e-18 Score=109.62 Aligned_cols=76 Identities=28% Similarity=0.531 Sum_probs=69.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+ +.+|..+..... .|.+|...|++..++..+...+|++++++||+|||++|++|+++
T Consensus 79 l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~ 154 (502)
T 3odu_A 79 LRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNS 154 (502)
T ss_dssp SCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeccccc
Confidence 58999999999999999995 688888776655 69999999999999999999999999999999999999999975
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.78 E-value=1.7e-18 Score=108.31 Aligned_cols=78 Identities=36% Similarity=0.535 Sum_probs=69.7
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhcccccC
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEKK 79 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~~ 79 (79)
+|+++|+++.|||++|++. .+.+|........+.|.+|...|++..++..++..+|.+++++|++|||.+|++|++++
T Consensus 156 l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~ 233 (434)
T 4ea3_A 156 MKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRAL 233 (434)
T ss_dssp CCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred cCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccc
Confidence 5899999999999999988 57889888888888899999999999999999999999999999999999999998753
No 15
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.77 E-value=1.4e-18 Score=110.98 Aligned_cols=76 Identities=20% Similarity=0.251 Sum_probs=67.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|+|++|||++|++.++...|..+.. ....|.++...|++..++..++.++|++++++||+|||++|+ |+++
T Consensus 94 lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~ 169 (520)
T 3v2y_A 94 FHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKL 169 (520)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C---
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-cccc
Confidence 589999999999999999998888877655 455799999999999999999999999999999999999999 9874
No 16
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.77 E-value=2.3e-18 Score=107.91 Aligned_cols=76 Identities=26% Similarity=0.406 Sum_probs=69.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|++++|||++|++.+++.+|..+... ..|.+|...|++..++..++..+|++++++|++|||.+|++|+++
T Consensus 52 ~~~~~~~~l~~La~aDll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~ 127 (488)
T 3eml_A 52 LQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRY 127 (488)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT--TCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGS
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeccccc
Confidence 4789999999999999999989999876543 368899999999999999999999999999999999999999874
No 17
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.76 E-value=4.2e-18 Score=106.58 Aligned_cols=78 Identities=27% Similarity=0.420 Sum_probs=71.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLN-VTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|++.|++++|||++|++.+++. +|..+.....+.|.+|+..|++..++...+..+|++++++|++|||++|++|+++
T Consensus 65 ~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~ 143 (448)
T 2z73_A 65 LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAA 143 (448)
T ss_dssp TCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTT
T ss_pred cCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 57899999999999999998764 7888777777889999999999999999999999999999999999999999875
No 18
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.75 E-value=2.8e-18 Score=106.68 Aligned_cols=76 Identities=26% Similarity=0.406 Sum_probs=69.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccchhhhHhhHHHHHHhHHHHHHHHHHHHHHHHHhhhccccc
Q psy13415 1 MRTVTNYFLVNLSLADAMVSTLNVTFNFVYMLSSDWPFGRFYCKVTQFVAVLSICASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 1 l~~~~~~~~~nLa~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|+++|+++.|||++|++.++..+|..+... ..|..|...|++..++..++..+|++++++||+|||.+|++|+++
T Consensus 62 l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~ 137 (447)
T 4eiy_A 62 LQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRY 137 (447)
T ss_dssp GCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEeccccc
Confidence 4799999999999999999989999876643 368889999999999999999999999999999999999999863
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.97 E-value=1.5e-10 Score=48.49 Aligned_cols=23 Identities=35% Similarity=0.313 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHhhhccccc
Q psy13415 56 ASVFTLMAISVDRKKKKKKKEEK 78 (79)
Q Consensus 56 ~s~~~l~~isidRy~~i~~p~~~ 78 (79)
+|++++++|++|||.+|++|++.
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~ 24 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEY 24 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGG
T ss_pred cHHHHHHHHHHHHHHHhhhhhhc
Confidence 68999999999999999999864
No 20
>2ljb_A M2 protein, BM2 protein chimera; M2 channel, transport protein; NMR {Influenza a virus} PDB: 2ljc_A*
Probab=34.68 E-value=28 Score=14.11 Aligned_cols=24 Identities=13% Similarity=0.268 Sum_probs=18.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHhhhc
Q psy13415 51 VLSICASVFTLMAISVDRKKKKKK 74 (79)
Q Consensus 51 ~~~~~~s~~~l~~isidRy~~i~~ 74 (79)
.......++++....+||...+.+
T Consensus 11 iaA~IigiLHlilWildrLff~kr 34 (35)
T 2ljb_A 11 VAASIIGILHFIAWTIGHLNQIKR 34 (35)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHC
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhc
Confidence 345667888999999999876644
No 21
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=25.91 E-value=29 Score=14.11 Aligned_cols=12 Identities=8% Similarity=-0.075 Sum_probs=7.2
Q ss_pred HHHhhhcccccC
Q psy13415 68 RKKKKKKKEEKK 79 (79)
Q Consensus 68 Ry~~i~~p~~~~ 79 (79)
=|.-+.||.++|
T Consensus 16 fYFl~iRPQ~Kr 27 (37)
T 2rdd_B 16 FYFMILRPQQKR 27 (37)
T ss_dssp HHHHTHHHHHHH
T ss_pred HHHHHhhhHHHH
Confidence 456666776553
Done!