Query psy13416
Match_columns 67
No_of_seqs 131 out of 1026
Neff 7.3
Searched_HMMs 29240
Date Fri Aug 16 18:54:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13416.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13416hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 99.7 6.3E-19 2.2E-23 121.6 3.9 61 4-64 3-85 (427)
2 2fxu_A Alpha-actin-1, actin, a 99.6 1.3E-15 4.6E-20 102.3 4.6 62 3-64 2-63 (375)
3 3qb0_A Actin-related protein 4 99.6 3E-15 1E-19 105.4 5.4 56 3-64 20-76 (498)
4 1k8k_B ARP2, actin-like protei 99.5 9.2E-16 3.1E-20 104.0 0.0 64 1-64 1-66 (394)
5 1k8k_A ARP3, actin-like protei 99.5 6.3E-14 2.1E-18 95.0 4.9 60 4-63 3-70 (418)
6 4fo0_A Actin-related protein 8 99.4 8.6E-13 2.9E-17 92.5 6.1 35 6-41 15-49 (593)
7 1jce_A ROD shape-determining p 98.2 1.3E-06 4.3E-11 57.5 4.4 49 7-63 4-52 (344)
8 4am6_A Actin-like protein ARP8 97.9 1.2E-05 4E-10 58.5 3.9 37 4-41 38-74 (655)
9 2v7y_A Chaperone protein DNAK; 97.3 0.00025 8.5E-09 49.3 4.1 46 7-62 3-56 (509)
10 3qfu_A 78 kDa glucose-regulate 96.8 0.0019 6.5E-08 42.6 5.0 53 7-61 19-71 (394)
11 3i33_A Heat shock-related 70 k 96.4 0.0032 1.1E-07 41.9 4.1 54 6-61 23-76 (404)
12 1dkg_D Molecular chaperone DNA 94.7 0.03 1E-06 36.9 3.5 46 7-61 3-56 (383)
13 2kho_A Heat shock protein 70; 93.1 0.1 3.5E-06 37.1 4.1 46 7-61 3-56 (605)
14 4gni_A Putative heat shock pro 93.1 0.094 3.2E-06 34.9 3.6 53 7-61 14-66 (409)
15 4apw_A ALP12; actin-like prote 92.6 0.16 5.5E-06 33.4 4.2 54 7-60 8-73 (329)
16 3js6_A Uncharacterized PARM pr 91.4 0.54 1.8E-05 31.3 5.7 53 6-61 4-72 (355)
17 4b9q_A Chaperone protein DNAK; 90.6 0.4 1.4E-05 34.0 4.8 54 7-61 3-56 (605)
18 1yuw_A Heat shock cognate 71 k 89.5 0.71 2.4E-05 32.4 5.2 53 7-61 5-57 (554)
19 2fsj_A Hypothetical protein TA 89.3 0.17 5.9E-06 33.4 1.9 33 7-41 22-54 (346)
20 3d2f_A Heat shock protein homo 85.9 1.1 3.9E-05 32.3 4.6 53 7-61 3-55 (675)
21 3h1q_A Ethanolamine utilizatio 83.2 1.5 5E-05 27.3 3.7 20 7-26 29-48 (272)
22 2zgy_A Plasmid segregation pro 78.1 2.7 9.3E-05 27.0 3.8 27 8-34 2-28 (320)
23 3aap_A Ectonucleoside triphosp 76.7 1.4 5E-05 29.4 2.2 18 6-23 3-20 (353)
24 3cer_A Possible exopolyphospha 76.0 1.6 5.3E-05 29.1 2.2 19 6-24 16-34 (343)
25 3cj1_A Ectonucleoside triphosp 69.3 2.4 8.2E-05 29.5 2.0 15 8-22 36-50 (456)
26 3zx3_A Ectonucleoside triphosp 68.6 2.5 8.7E-05 29.5 2.0 13 8-20 36-48 (452)
27 1u6z_A Exopolyphosphatase; alp 61.7 4.2 0.00014 28.4 2.0 19 6-24 11-29 (513)
28 3mdq_A Exopolyphosphatase; str 53.6 19 0.00065 23.4 4.0 33 6-38 131-163 (315)
29 4ijn_A Acetate kinase, acetoki 40.9 38 0.0013 23.3 4.1 24 6-29 23-46 (398)
30 3ifr_A Carbohydrate kinase, FG 40.0 18 0.00061 24.9 2.4 19 8-26 9-27 (508)
31 3r9p_A ACKA; ssgcid, seattle s 39.9 16 0.00054 25.2 2.1 19 6-24 12-30 (391)
32 1t6c_A Exopolyphosphatase; alp 38.8 21 0.00072 23.3 2.5 24 6-29 138-161 (315)
33 1lya_A Cathepsin D; lysosomal 36.8 19 0.00063 19.4 1.7 13 8-20 29-41 (97)
34 2iir_A Acetate kinase; transfe 35.5 19 0.00064 24.9 1.9 18 7-24 2-19 (403)
35 2f9w_A Pantothenate kinase; CO 35.0 15 0.00052 23.7 1.3 14 6-19 138-151 (271)
36 4h0p_A Acetate kinase; askha ( 34.1 22 0.00076 24.9 2.1 17 7-23 7-23 (438)
37 4gud_A Imidazole glycerol phos 34.0 11 0.00039 22.5 0.6 12 7-18 4-15 (211)
38 2nrh_A Transcriptional activat 33.2 13 0.00045 23.2 0.8 12 7-18 86-97 (219)
39 2e1z_A Propionate kinase; TDCD 32.2 50 0.0017 22.9 3.6 27 6-32 18-44 (415)
40 1t6e_X Xylanase inhibitor; two 32.1 24 0.00081 23.2 1.9 13 8-20 25-37 (381)
41 4ehu_A Activator of 2-hydroxyi 31.5 27 0.00094 21.6 2.1 20 7-26 2-21 (276)
42 1hux_A Activator of (R)-2-hydr 30.8 29 0.001 21.8 2.1 20 7-26 4-23 (270)
43 1g99_A Acetate kinase; alpha/b 29.8 34 0.0012 23.6 2.4 18 7-24 2-19 (408)
44 2p3r_A Glycerol kinase; glycer 29.1 50 0.0017 22.7 3.2 19 8-26 5-23 (510)
45 3sk3_A Acetate kinase, acetoki 28.8 40 0.0014 23.3 2.6 17 8-24 21-37 (415)
46 3hi0_A Putative exopolyphospha 28.7 30 0.001 24.1 2.0 24 7-30 141-164 (508)
47 4h0o_A Acetate kinase; askha ( 28.3 32 0.0011 23.8 2.1 18 6-23 14-31 (404)
48 1b5f_B Protein (cardosin A); h 27.4 51 0.0017 16.9 2.4 14 8-23 71-84 (87)
49 3h3n_X Glycerol kinase; ATP-bi 26.9 49 0.0017 22.7 2.8 20 7-26 6-25 (506)
50 2ews_A Pantothenate kinase; PA 26.3 35 0.0012 22.2 1.9 19 6-24 20-38 (287)
51 3hz6_A Xylulokinase; xylulose, 25.6 49 0.0017 22.7 2.7 20 7-26 6-25 (511)
52 4e1j_A Glycerol kinase; struct 25.6 49 0.0017 22.8 2.7 21 7-27 27-47 (520)
53 3g25_A Glycerol kinase; IDP007 24.9 52 0.0018 22.5 2.7 21 7-27 7-27 (501)
54 3ll3_A Gluconate kinase; xylul 24.5 42 0.0014 23.0 2.1 20 7-26 5-24 (504)
55 3khy_A Propionate kinase; csgi 24.5 36 0.0012 23.4 1.8 23 7-29 3-25 (384)
56 2dpn_A Glycerol kinase; thermu 24.3 54 0.0019 22.3 2.7 20 8-27 4-23 (495)
57 3l0q_A Xylulose kinase; xlylul 24.1 51 0.0018 22.8 2.5 20 7-26 6-25 (554)
58 2itm_A Xylulose kinase, xylulo 23.9 56 0.0019 22.1 2.7 18 9-26 3-20 (484)
59 2uyt_A Rhamnulokinase; rhamnos 23.6 40 0.0014 22.8 1.9 18 7-24 5-22 (489)
60 2zf5_O Glycerol kinase; hypert 23.0 59 0.002 22.1 2.7 20 7-26 4-23 (497)
61 3jvp_A Ribulokinase; PSI-II, N 22.5 54 0.0019 22.9 2.4 19 7-25 6-24 (572)
62 4a2a_A Cell division protein F 22.4 48 0.0016 22.3 2.1 17 7-23 9-25 (419)
63 4bc3_A Xylulose kinase; transf 22.3 40 0.0014 23.4 1.7 19 8-26 12-30 (538)
64 3ezw_A Glycerol kinase; glycer 21.5 79 0.0027 21.7 3.1 20 7-26 5-24 (526)
65 2nxv_A ATP synthase subunits r 21.4 38 0.0013 20.6 1.3 10 7-16 48-57 (249)
66 2ych_A Competence protein PILM 21.3 84 0.0029 20.1 3.0 23 7-29 14-36 (377)
67 4a57_A Nucleoside-triphosphata 21.2 44 0.0015 24.4 1.8 14 7-20 41-54 (611)
68 2d4w_A Glycerol kinase; alpha 21.1 68 0.0023 21.9 2.7 20 8-27 4-23 (504)
69 2w40_A Glycerol kinase, putati 20.9 55 0.0019 22.3 2.1 19 8-26 6-24 (503)
70 3h6e_A Carbohydrate kinase, FG 20.6 69 0.0024 22.0 2.6 20 7-26 7-26 (482)
71 1saz_A Probable butyrate kinas 20.6 65 0.0022 21.2 2.4 20 7-26 3-22 (381)
72 1vhx_A Putative holliday junct 20.4 1E+02 0.0034 17.9 3.0 22 6-27 3-24 (150)
73 3i8b_A Xylulose kinase; strain 20.4 79 0.0027 21.8 2.9 20 7-26 6-26 (515)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.74 E-value=6.3e-19 Score=121.59 Aligned_cols=61 Identities=30% Similarity=0.573 Sum_probs=46.5
Q ss_pred CCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccC----------------------cceecCCCcceEEchhhhh
Q psy13416 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ----------------------GVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~----------------------~~~~~~~~~~~~vG~ea~~ 61 (67)
.+.+||||||||+++||||||++.|+++|||+||+++++ ..+.+..++++|||+||+.
T Consensus 3 ~~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~ 82 (427)
T 3dwl_A 3 SFNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALK 82 (427)
T ss_dssp CCCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHH
T ss_pred CCCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhh
Confidence 357899999999999999999999999999999999864 1122445678999999987
Q ss_pred hcc
Q psy13416 62 KRG 64 (67)
Q Consensus 62 ~~~ 64 (67)
.++
T Consensus 83 ~~~ 85 (427)
T 3dwl_A 83 KAS 85 (427)
T ss_dssp THH
T ss_pred Ccc
Confidence 653
No 2
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.58 E-value=1.3e-15 Score=102.33 Aligned_cols=62 Identities=89% Similarity=1.377 Sum_probs=47.8
Q ss_pred CCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhhcc
Q psy13416 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64 (67)
Q Consensus 3 ~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~~~ 64 (67)
.|++++||||+||+++|+||+|++.|++++||++|+++....+.+...++++||++|...++
T Consensus 2 ~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~ 63 (375)
T 2fxu_A 2 EDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 63 (375)
T ss_dssp --CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTT
T ss_pred CCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCc
Confidence 36778999999999999999999999999999999988765444444568999999987654
No 3
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3e-15 Score=105.35 Aligned_cols=56 Identities=27% Similarity=0.523 Sum_probs=47.1
Q ss_pred CCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchh-hhhhcc
Q psy13416 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE-AQSKRG 64 (67)
Q Consensus 3 ~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~e-a~~~~~ 64 (67)
+++.++|||||||+++||||||++.|+++|||+||+++... .++.+||++ +...++
T Consensus 20 gde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~ 76 (498)
T 3qb0_A 20 GDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRK 76 (498)
T ss_dssp CCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCT
T ss_pred CCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcC
Confidence 47889999999999999999999999999999999987542 457899997 444443
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.52 E-value=9.2e-16 Score=104.04 Aligned_cols=64 Identities=41% Similarity=0.709 Sum_probs=0.0
Q ss_pred CCCCCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcce-e-cCCCcceEEchhhhhhcc
Q psy13416 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-V-GMGQKDSYVGDEAQSKRG 64 (67)
Q Consensus 1 m~~~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~-~-~~~~~~~~vG~ea~~~~~ 64 (67)
|...+.++||||+||+++|+||+|++.|+++|||++|+++....+ . +...++++||++|...++
T Consensus 1 ~~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~ 66 (394)
T 1k8k_B 1 MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRS 66 (394)
T ss_dssp ------------------------------------------------------------------
T ss_pred CCCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCC
Confidence 444567899999999999999999999999999999998875322 1 223467899999877654
No 5
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.45 E-value=6.3e-14 Score=94.95 Aligned_cols=60 Identities=37% Similarity=0.619 Sum_probs=46.3
Q ss_pred CCcceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcc--------eecCCCcceEEchhhhhhc
Q psy13416 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV--------MVGMGQKDSYVGDEAQSKR 63 (67)
Q Consensus 4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~--------~~~~~~~~~~vG~ea~~~~ 63 (67)
.++++||||+||+++|+||+|++.|+++|||+||+++.... +.+...++++||++|...+
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~ 70 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKP 70 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcC
Confidence 34678999999999999999999999999999999876421 1222234699999997653
No 6
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.36 E-value=8.6e-13 Score=92.50 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=31.2
Q ss_pred cceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 41 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~ 41 (67)
++.||||+||+++|+|||||+.|+. ||++||+++.
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~~-iP~~iar~~~ 49 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPAS-IPHVIARRHK 49 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCEE-EECCEEEECS
T ss_pred CCEEEEeCCCCCeEeeecCCCCCCe-eeEEEEEECC
Confidence 4579999999999999999999985 6999998753
No 7
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=98.22 E-value=1.3e-06 Score=57.48 Aligned_cols=49 Identities=18% Similarity=0.111 Sum_probs=39.3
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhhhc
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 63 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~~ 63 (67)
.+|+||+||.++|++++++. |...+||+|+..+.. .+.+++|++|....
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~ 52 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMI 52 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTT
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhc
Confidence 57999999999999999876 778899999986541 13468999987643
No 8
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.85 E-value=1.2e-05 Score=58.55 Aligned_cols=37 Identities=38% Similarity=0.665 Sum_probs=32.9
Q ss_pred CCcceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416 4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 41 (67)
Q Consensus 4 ~~~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~ 41 (67)
+....|||..||.++|+|+|.|..|. .+|++|++++.
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~ 74 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKK 74 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGG
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccc
Confidence 45778999999999999999999999 57999998643
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=97.27 E-value=0.00025 Score=49.32 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=36.4
Q ss_pred ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~~ 62 (67)
.+|.||.||.+++++++.+..|..+ +||+|+.. ..+.++|++|...
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~ 56 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQ 56 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHh
Confidence 4788999999999999988888876 77777762 1356899998654
No 10
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.84 E-value=0.0019 Score=42.65 Aligned_cols=53 Identities=13% Similarity=0.244 Sum_probs=35.1
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
.+|.||+||.++++++..+..|.. +++..|+.+.... ......+.++|++|..
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~i-i~~~~g~~~~PS~-v~~~~~~~~vG~~A~~ 71 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEI-LANEQGNRITPSY-VAFTDDERLIGDAAKN 71 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEE-CCCTTSCSSEECC-EEECSSCEEESHHHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEE-EECCCCCEeeceE-EEEeCCcEEecHHHHH
Confidence 468899999999999998888774 5554454432211 1112235788988865
No 11
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=96.45 E-value=0.0032 Score=41.87 Aligned_cols=54 Identities=15% Similarity=0.278 Sum_probs=36.8
Q ss_pred cceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
+..|.||.||.+++++|..+..|. ++++.-|+.+..... .....+.++|++|..
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~-ii~~~~g~~~~PS~v-~~~~~~~~vG~~A~~ 76 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVE-IIANDQGNRTTPSYV-AFTDTERLIGDAAKN 76 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEE-ECCCTTSCSSEECCE-EECSSCEEETHHHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeE-EEECCCCCcccceEE-EECCCCEEecHHHHH
Confidence 457889999999999999877776 456666654332211 112236789999865
No 12
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=94.69 E-value=0.03 Score=36.93 Aligned_cols=46 Identities=22% Similarity=0.394 Sum_probs=30.4
Q ss_pred ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.||.++.+.+..+..|..+ +||+|...+ ..+.++|++|..
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~---------~~~~~~G~~A~~ 56 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ---------DGETLVGQPAKR 56 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECT---------TSCEEESHHHHT
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEEC---------CCCEEECHHHHH
Confidence 3577999999999999865556543 455555432 124567777654
No 13
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=93.13 E-value=0.1 Score=37.08 Aligned_cols=46 Identities=22% Similarity=0.394 Sum_probs=30.2
Q ss_pred ceEEEECCCCceEEEEeCCCCCeee--------eeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~--------~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.|+.++.+++..+..|..+ .||+|+..+ ..+.++|++|..
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~---------~~~~~vG~~A~~ 56 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ---------DGETLVGQPAKR 56 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECT---------TSCEEESHHHHT
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEEC---------CCcEEECHHHHH
Confidence 3678999999999999866666543 344444321 224567877754
No 14
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=93.05 E-value=0.094 Score=34.90 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=30.3
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.|+.++++.+..+..|. ++++.-|..+.... ........++|++|..
T Consensus 14 ~vvGIDlGTt~s~va~~~~g~~~-ii~~~~g~~~~PS~-v~~~~~~~~~G~~A~~ 66 (409)
T 4gni_A 14 VVIGITFGNSNSSIAHTVDDKAE-VIANEDGDRQIPTI-LSYVDGDEYYGQQAKN 66 (409)
T ss_dssp CEEEEEECSSEEEEEEEETTEEE-EECCTTSCSSEECE-EEEETTEEEEHHHHHH
T ss_pred cEEEEEcCCCeEEEEEEeCCceE-EEECCCCCccCceE-EEECCCcEEEcHHHHH
Confidence 46779999999999998443343 44444343322111 1111235678888754
No 15
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=92.56 E-value=0.16 Score=33.38 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=35.6
Q ss_pred ceEEEECCCCceEEEEe--C---CCCCeeeeeccccccccCc-------ceecCCCcceEEchhhh
Q psy13416 7 AALVVDNGSGMCKAGFA--G---DDAPRAVFPSIVGRPRHQG-------VMVGMGQKDSYVGDEAQ 60 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~a--g---~~~P~~~~ps~vg~~~~~~-------~~~~~~~~~~~vG~ea~ 60 (67)
..|-||.|-+++|+-.. + ++.-+..|||.++..+... .....+.+.++||+++.
T Consensus 8 ~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~ 73 (329)
T 4apw_A 8 YVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGV 73 (329)
T ss_dssp EEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSS
T ss_pred eEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccc
Confidence 35669999999999763 2 2224467999998765321 11223446789998764
No 16
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=91.38 E-value=0.54 Score=31.32 Aligned_cols=53 Identities=23% Similarity=0.448 Sum_probs=34.9
Q ss_pred cceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcc---------------eecCCCcc-eEEchhhhh
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV---------------MVGMGQKD-SYVGDEAQS 61 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~---------------~~~~~~~~-~~vG~ea~~ 61 (67)
+..|-||+|=+++|+ ..+. . ...|||+++....... .......+ +|||+.|..
T Consensus 4 ~~iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~ 72 (355)
T 3js6_A 4 VYVMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDK 72 (355)
T ss_dssp EEEEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHH
T ss_pred cEEEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhh
Confidence 446779999999995 5544 2 5789999986543210 01123356 899998854
No 17
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=90.65 E-value=0.4 Score=34.04 Aligned_cols=54 Identities=17% Similarity=0.247 Sum_probs=31.7
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.|+.++.+.+.....|. ++++.-|.........-......++|++|..
T Consensus 3 ~viGIDlGTT~S~Va~~~~g~~~-ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~ 56 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMDGTTPR-VLENAEGDRTTPSIIAYTQDGCTLVGQPAKR 56 (605)
T ss_dssp CEEEEECCSSEEEEEEEETTEEE-ECCCTTSCSSEECCEEECTTSCEEESHHHHH
T ss_pred cEEEEEcCCCcEEEEEEECCEEE-EEECCCCCcccceEEEEeCCCcEEecHHHHH
Confidence 46779999999999998665665 3444433332211111111235678888754
No 18
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=89.51 E-value=0.71 Score=32.39 Aligned_cols=53 Identities=17% Similarity=0.278 Sum_probs=31.8
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.|+.++.+++.....|. ++++--|....... ........++|++|..
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~-ii~n~~g~~~~PS~-V~~~~~~~~vG~~A~~ 57 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVE-IIANDQGNRTTPSY-VAFTDTERLIGDAAKN 57 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEE-ECCCTTSCSEEECC-EEECSSCEEETHHHHT
T ss_pred CEEEEEeCcccEEEEEEECCEEE-EEECCCCCeecceE-EEEcCCcEEEcHHHHH
Confidence 46889999999999999766555 34444333221111 1111225678888754
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=89.26 E-value=0.17 Score=33.40 Aligned_cols=33 Identities=27% Similarity=0.236 Sum_probs=24.8
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeecccccccc
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 41 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~ 41 (67)
..|-||.|++++|+=. ++ .-...|||+|+....
T Consensus 22 ~~igiDlG~~~tkv~~-~~-g~~~~~PSvva~~~~ 54 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VD-GKRIIFPSRWAVTET 54 (346)
T ss_dssp EEEEEEECSSEEEEEC-GG-GCEEEEESCEEEECC
T ss_pred EEEEEecCCcceeEEe-cC-CCEEEecceeeeccc
Confidence 3578999999999864 32 235679999987654
No 20
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=85.90 E-value=1.1 Score=32.30 Aligned_cols=53 Identities=21% Similarity=0.368 Sum_probs=31.5
Q ss_pred ceEEEECCCCceEEEEeCCCCCeeeeeccccccccCcceecCCCcceEEchhhhh
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~~~~~~~~~~~~~~~~~vG~ea~~ 61 (67)
..|-||.|+.++.+++.....|. ++++--|....... ........++|++|..
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~-ii~n~~g~r~tPS~-Vaf~~~~~~vG~~A~~ 55 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGID-IVVNEVSNRSTPSV-VGFGPKNRYLGETGKN 55 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEE-EECCTTSCSSEECC-EEECSSSEEETHHHHH
T ss_pred cEEEEEcCCCcEEEEEEECCeeE-EEECCCCCcccceE-EEECCCcEEecHHHHH
Confidence 37889999999999997655555 34444443221111 1111224688988854
No 21
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=83.19 E-value=1.5 Score=27.28 Aligned_cols=20 Identities=15% Similarity=0.064 Sum_probs=16.4
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
..++||+||.++|+....++
T Consensus 29 ~~~gIDiGS~s~k~vi~~~~ 48 (272)
T 3h1q_A 29 YKVGVDLGTADIVLVVTDQE 48 (272)
T ss_dssp CEEEEECCSSEEEEEEECTT
T ss_pred EEEEEEcccceEEEEEECCC
Confidence 36789999999999986543
No 22
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=78.08 E-value=2.7 Score=26.99 Aligned_cols=27 Identities=22% Similarity=0.245 Sum_probs=19.2
Q ss_pred eEEEECCCCceEEEEeCCCCCeeeeec
Q psy13416 8 ALVVDNGSGMCKAGFAGDDAPRAVFPS 34 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~~P~~~~ps 34 (67)
.+.||.|+.++|+.+..++.....+|+
T Consensus 2 ~igiD~G~sntK~~~~~~~g~~~~~~s 28 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESDGTIKQHIS 28 (320)
T ss_dssp EEEEEECSSEEEEEEECSSSCEEEEEE
T ss_pred eEEEecCCccceEEEecCCCEEEEEec
Confidence 478999999999999554443344543
No 23
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=76.68 E-value=1.4 Score=29.44 Aligned_cols=18 Identities=22% Similarity=0.217 Sum_probs=14.7
Q ss_pred cceEEEECCCCceEEEEe
Q psy13416 6 VAALVVDNGSGMCKAGFA 23 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~a 23 (67)
...+|||.||..+|+=-+
T Consensus 3 ~~~avID~GSns~Rl~I~ 20 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIY 20 (353)
T ss_dssp EEEEEEEECSSCEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEE
Confidence 457899999999998544
No 24
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=75.98 E-value=1.6 Score=29.11 Aligned_cols=19 Identities=21% Similarity=0.254 Sum_probs=15.2
Q ss_pred cceEEEECCCCceEEEEeC
Q psy13416 6 VAALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag 24 (67)
+..-+||+||+++|.=-+.
T Consensus 16 ~~~A~IDiGSNsiRL~I~~ 34 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIAR 34 (343)
T ss_dssp EEEEEEEECSSCEEEEEEE
T ss_pred CeEEEEEcccceeEeEEEE
Confidence 4457899999999997663
No 25
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=69.35 E-value=2.4 Score=29.45 Aligned_cols=15 Identities=27% Similarity=0.326 Sum_probs=12.7
Q ss_pred eEEEECCCCceEEEE
Q psy13416 8 ALVVDNGSGMCKAGF 22 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ 22 (67)
.+|||.||..+|+=-
T Consensus 36 ~~vID~GSns~Rl~V 50 (456)
T 3cj1_A 36 GIVLDAGSSHTSMFV 50 (456)
T ss_dssp EEEEEECSSCEEEEE
T ss_pred EEEEEcCCCCeEEEE
Confidence 579999999999843
No 26
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=68.62 E-value=2.5 Score=29.46 Aligned_cols=13 Identities=31% Similarity=0.511 Sum_probs=11.8
Q ss_pred eEEEECCCCceEE
Q psy13416 8 ALVVDNGSGMCKA 20 (67)
Q Consensus 8 ~vViD~GS~~~K~ 20 (67)
.||||.||..+|+
T Consensus 36 ~iviDaGSsgtRl 48 (452)
T 3zx3_A 36 GIVLDAGSSHTNL 48 (452)
T ss_dssp EEEEEECSSCEEE
T ss_pred EEEEEcCCCCcEE
Confidence 5899999999996
No 27
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=61.66 E-value=4.2 Score=28.40 Aligned_cols=19 Identities=26% Similarity=0.111 Sum_probs=14.7
Q ss_pred cceEEEECCCCceEEEEeC
Q psy13416 6 VAALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag 24 (67)
+..-+||.||+++|.--+.
T Consensus 11 ~~~AaIDiGSNSirL~I~~ 29 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIAR 29 (513)
T ss_dssp -CEEEEEECSSCEEEEEEE
T ss_pred CeEEEEEeccccEEEEEEE
Confidence 3457899999999997663
No 28
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=53.60 E-value=19 Score=23.41 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=24.5
Q ss_pred cceEEEECCCCceEEEEeCCCCCeeeeeccccc
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR 38 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ps~vg~ 38 (67)
...+|+|.|++++.+-+..+..|.....--+|.
T Consensus 131 ~~~lviDIGGGStEl~~~~~~~~~~~~Sl~lG~ 163 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGNKNEILWKQSFEIGG 163 (315)
T ss_dssp CCEEEEEECSSCEEEEEECSSCEEEEEEESCCH
T ss_pred CCEEEEEeCCCceEEEEEECCeEeeeEEEechh
Confidence 457999999999999999887776533323443
No 29
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=40.85 E-value=38 Score=23.32 Aligned_cols=24 Identities=29% Similarity=0.333 Sum_probs=18.2
Q ss_pred cceEEEECCCCceEEEEeCCCCCe
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPR 29 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~ 29 (67)
+..+||..||.++|+..-..+.+.
T Consensus 23 ~~ILviN~GSSS~K~~l~~~~~~~ 46 (398)
T 4ijn_A 23 VTVLVVNSGSSSLKYAVVRPASGE 46 (398)
T ss_dssp CEEEEEEECSSCEEEEEECTTTCC
T ss_pred ccEEEEeCCchhheEEEEECCCCc
Confidence 357899999999999776544443
No 30
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=40.01 E-value=18 Score=24.93 Aligned_cols=19 Identities=16% Similarity=0.013 Sum_probs=16.0
Q ss_pred eEEEECCCCceEEEEeCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~ 26 (67)
.+.||.|+..+|++.-.++
T Consensus 9 ~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 9 VIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEecCcceEEEEECCC
Confidence 5669999999999987654
No 31
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=39.93 E-value=16 Score=25.20 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=15.8
Q ss_pred cceEEEECCCCceEEEEeC
Q psy13416 6 VAALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag 24 (67)
++.+||..||+++|+..-.
T Consensus 12 M~iLviN~GSSSlK~~l~~ 30 (391)
T 3r9p_A 12 RRVLVINSGSSSLKFQLVD 30 (391)
T ss_dssp CEEEEEEECSSCEEEEEEE
T ss_pred ceEEEEecCchhheeEEEe
Confidence 5688999999999986543
No 32
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=38.78 E-value=21 Score=23.27 Aligned_cols=24 Identities=29% Similarity=0.295 Sum_probs=19.7
Q ss_pred cceEEEECCCCceEEEEeCCCCCe
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPR 29 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~ 29 (67)
...+|+|.|++++.+-+..+..|.
T Consensus 138 ~~~lvvDIGGGStEl~~~~~~~~~ 161 (315)
T 1t6c_A 138 GEVCVVDQGGGSTEYVFGKGYKVR 161 (315)
T ss_dssp SEEEEEEEETTEEEEEEEETTEEE
T ss_pred CCEEEEEeCCCcEEEEEEeCCcee
Confidence 357999999999999998666554
No 33
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=36.83 E-value=19 Score=19.40 Aligned_cols=13 Identities=31% Similarity=0.340 Sum_probs=10.8
Q ss_pred eEEEECCCCceEE
Q psy13416 8 ALVVDNGSGMCKA 20 (67)
Q Consensus 8 ~vViD~GS~~~K~ 20 (67)
.|+||.||..+=+
T Consensus 29 ~v~~DTGSs~lWv 41 (97)
T 1lya_A 29 TVVFDTGSSNLWV 41 (97)
T ss_dssp EEEEETTCCCEEE
T ss_pred EEEEeCCCCceEE
Confidence 6899999997754
No 34
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=35.46 E-value=19 Score=24.86 Aligned_cols=18 Identities=28% Similarity=0.375 Sum_probs=15.8
Q ss_pred ceEEEECCCCceEEEEeC
Q psy13416 7 AALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag 24 (67)
..+||..||.++|+..=.
T Consensus 2 ~ILviN~GSSS~K~~l~~ 19 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIE 19 (403)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred eEEEEeCCchhheeEEEE
Confidence 478999999999999764
No 35
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=35.03 E-value=15 Score=23.70 Aligned_cols=14 Identities=36% Similarity=0.553 Sum_probs=11.2
Q ss_pred cceEEEECCCCceE
Q psy13416 6 VAALVVDNGSGMCK 19 (67)
Q Consensus 6 ~~~vViD~GS~~~K 19 (67)
.+.||||.||+.+=
T Consensus 138 ~~~iVVD~GTAtT~ 151 (271)
T 2f9w_A 138 KACLVIDLGTAVTS 151 (271)
T ss_dssp SCEEEEEESSEEEE
T ss_pred CCEEEEEcCCceEE
Confidence 35799999998873
No 36
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=34.11 E-value=22 Score=24.86 Aligned_cols=17 Identities=24% Similarity=0.261 Sum_probs=14.1
Q ss_pred ceEEEECCCCceEEEEe
Q psy13416 7 AALVVDNGSGMCKAGFA 23 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~a 23 (67)
..+||..||+++|.-.=
T Consensus 7 ~ILviNaGSSSlKf~L~ 23 (438)
T 4h0p_A 7 YLLAINCGSSSIKGKLF 23 (438)
T ss_dssp EEEEEEECSSCEEEEEE
T ss_pred EEEEEECCcccceeEEE
Confidence 35799999999998654
No 37
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=34.03 E-value=11 Score=22.48 Aligned_cols=12 Identities=17% Similarity=0.471 Sum_probs=9.1
Q ss_pred ceEEEECCCCce
Q psy13416 7 AALVVDNGSGMC 18 (67)
Q Consensus 7 ~~vViD~GS~~~ 18 (67)
+.+|||.|+.++
T Consensus 4 ~I~iiD~g~~n~ 15 (211)
T 4gud_A 4 NVVIIDTGCANI 15 (211)
T ss_dssp CEEEECCCCTTH
T ss_pred EEEEEECCCChH
Confidence 577889998754
No 38
>2nrh_A Transcriptional activator, putative, BAF family; structural genomics, unknown function, putative transcription activator, PSI-2; 2.30A {Campylobacter jejuni} SCOP: c.55.1.13 c.55.1.13
Probab=33.25 E-value=13 Score=23.25 Aligned_cols=12 Identities=42% Similarity=0.681 Sum_probs=10.2
Q ss_pred ceEEEECCCCce
Q psy13416 7 AALVVDNGSGMC 18 (67)
Q Consensus 7 ~~vViD~GS~~~ 18 (67)
+.+|||.||+.+
T Consensus 86 ~~iVVD~GTA~T 97 (219)
T 2nrh_A 86 DGVVVDAGSAIT 97 (219)
T ss_dssp SSEEEEESSEEE
T ss_pred CeEEEEcCCcEE
Confidence 469999999876
No 39
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=32.22 E-value=50 Score=22.87 Aligned_cols=27 Identities=19% Similarity=0.172 Sum_probs=19.5
Q ss_pred cceEEEECCCCceEEEEeCCCCCeeee
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDAPRAVF 32 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~P~~~~ 32 (67)
...+||..||.++|+..=..+.....+
T Consensus 18 ~~ILviN~GSSS~K~~lf~~~~~~~l~ 44 (415)
T 2e1z_A 18 PVVLVINCGSSSIKFSVLDVATCDVLM 44 (415)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEE
T ss_pred CeEEEEECCchhheEEEEECCCCCEEE
Confidence 457999999999999976543333333
No 40
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=32.10 E-value=24 Score=23.15 Aligned_cols=13 Identities=23% Similarity=0.322 Sum_probs=11.0
Q ss_pred eEEEECCCCceEE
Q psy13416 8 ALVVDNGSGMCKA 20 (67)
Q Consensus 8 ~vViD~GS~~~K~ 20 (67)
||+||.||..+=+
T Consensus 25 Pv~~DTGSs~lWv 37 (381)
T 1t6e_X 25 SLVLDVAGPLVWS 37 (381)
T ss_dssp EEEEETTCCCEEE
T ss_pred EEEEECCCCceEE
Confidence 5999999998765
No 41
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=31.48 E-value=27 Score=21.56 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=15.0
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
..+-||.||-++|+-.-.+.
T Consensus 2 ~~lGID~GsT~tk~av~d~~ 21 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNG 21 (276)
T ss_dssp EEEEEEECSSCEEEEEEETT
T ss_pred eEEEEEcCccEEEEEEEECC
Confidence 35679999999998765444
No 42
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=30.83 E-value=29 Score=21.79 Aligned_cols=20 Identities=30% Similarity=0.243 Sum_probs=16.3
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+-||.||.++|+..-.++
T Consensus 4 ~~lGiD~Gst~~k~~l~d~~ 23 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKDG 23 (270)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeccceEEEEEEeCC
Confidence 35789999999999986543
No 43
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=29.82 E-value=34 Score=23.62 Aligned_cols=18 Identities=28% Similarity=0.366 Sum_probs=15.6
Q ss_pred ceEEEECCCCceEEEEeC
Q psy13416 7 AALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag 24 (67)
..+||..||.++|+..=.
T Consensus 2 ~ILviN~GSSS~K~~lf~ 19 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLID 19 (408)
T ss_dssp EEEEEEECSSCEEEEEEE
T ss_pred eEEEEECCchhheeEEEE
Confidence 468999999999998764
No 44
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=29.09 E-value=50 Score=22.68 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=16.3
Q ss_pred eEEEECCCCceEEEEeCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~ 26 (67)
.+.||.|+..+|++.-.++
T Consensus 5 ~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 5 IVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEcCCcceEEEEECCC
Confidence 5679999999999988654
No 45
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=28.82 E-value=40 Score=23.33 Aligned_cols=17 Identities=29% Similarity=0.348 Sum_probs=14.7
Q ss_pred eEEEECCCCceEEEEeC
Q psy13416 8 ALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag 24 (67)
.+||..||.++|+..=.
T Consensus 21 ILviN~GSSS~K~~lf~ 37 (415)
T 3sk3_A 21 VLVLNCGSSSLKFAIID 37 (415)
T ss_dssp EEEEEECSSCEEEEEEE
T ss_pred EEEEeCchHhhhheeEE
Confidence 68999999999998653
No 46
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=28.70 E-value=30 Score=24.06 Aligned_cols=24 Identities=17% Similarity=0.051 Sum_probs=19.7
Q ss_pred ceEEEECCCCceEEEEeCCCCCee
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPRA 30 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~~ 30 (67)
..+|+|+|++++.+-+..+..|..
T Consensus 141 ~~lvvDIGGGStEl~~~~~~~~~~ 164 (508)
T 3hi0_A 141 DGIAGDLGGGSLELIDIKDKSCGE 164 (508)
T ss_dssp EEEEEEECSSCEEEEEEETTEECC
T ss_pred CeEEEEeCCCceEEEEeeCCeeee
Confidence 359999999999999887766653
No 47
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=28.35 E-value=32 Score=23.84 Aligned_cols=18 Identities=17% Similarity=0.130 Sum_probs=14.8
Q ss_pred cceEEEECCCCceEEEEe
Q psy13416 6 VAALVVDNGSGMCKAGFA 23 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~a 23 (67)
...+||..||+++|.-.=
T Consensus 14 ~~iLviN~GSSSlKf~l~ 31 (404)
T 4h0o_A 14 SNVLIFNVGSSSLTYKVF 31 (404)
T ss_dssp CEEEEEEECSSCEEEEEE
T ss_pred ceEEEEECCchhheeeEe
Confidence 357999999999998554
No 48
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=27.44 E-value=51 Score=16.86 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=9.8
Q ss_pred eEEEECCCCceEEEEe
Q psy13416 8 ALVVDNGSGMCKAGFA 23 (67)
Q Consensus 8 ~vViD~GS~~~K~G~a 23 (67)
-+|+|.+.. |+|||
T Consensus 71 y~vfD~~~~--riGfA 84 (87)
T 1b5f_B 71 HTVFDYGNL--LVGFA 84 (87)
T ss_dssp EEEEETTTT--EEEEE
T ss_pred EEEEECCCC--EEEEE
Confidence 467887754 67777
No 49
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=26.92 E-value=49 Score=22.67 Aligned_cols=20 Identities=15% Similarity=0.273 Sum_probs=16.5
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+..+|+..-.++
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 45779999999999987654
No 50
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=26.35 E-value=35 Score=22.16 Aligned_cols=19 Identities=16% Similarity=0.108 Sum_probs=15.2
Q ss_pred cceEEEECCCCceEEEEeC
Q psy13416 6 VAALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag 24 (67)
...+-||.||.++|+=+-.
T Consensus 20 ~~~iGIDiGsTt~K~V~~~ 38 (287)
T 2ews_A 20 HMKVGIDAGGTLIKIVQEQ 38 (287)
T ss_dssp -CEEEEEECSSEEEEEEEC
T ss_pred CeEEEEEEChhhEEEEEEc
Confidence 3457799999999998863
No 51
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=25.62 E-value=49 Score=22.73 Aligned_cols=20 Identities=30% Similarity=0.298 Sum_probs=16.9
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+..+|+..-.++
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 45779999999999988765
No 52
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=25.59 E-value=49 Score=22.82 Aligned_cols=21 Identities=19% Similarity=0.245 Sum_probs=17.1
Q ss_pred ceEEEECCCCceEEEEeCCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDDA 27 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~ 27 (67)
-.+.||.|+..+|++.-.++.
T Consensus 27 ~~lgIDiGtts~k~~l~d~~G 47 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGNQ 47 (520)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred eEEEEEeCCcceEEEEECCCC
Confidence 357799999999999876553
No 53
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=24.93 E-value=52 Score=22.48 Aligned_cols=21 Identities=19% Similarity=0.268 Sum_probs=17.0
Q ss_pred ceEEEECCCCceEEEEeCCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDDA 27 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~ 27 (67)
-.+.||.|+..+|++.-.++.
T Consensus 7 ~~lgIDiGtts~k~~l~d~~G 27 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQKG 27 (501)
T ss_dssp EEEEEEECSSEEEEEEECTTS
T ss_pred EEEEEEeCccceEEEEEcCCC
Confidence 357799999999999876643
No 54
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=24.53 E-value=42 Score=23.03 Aligned_cols=20 Identities=15% Similarity=0.087 Sum_probs=16.6
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+..+|+..-.++
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 35779999999999987655
No 55
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=24.47 E-value=36 Score=23.36 Aligned_cols=23 Identities=22% Similarity=0.317 Sum_probs=16.5
Q ss_pred ceEEEECCCCceEEEEeCCCCCe
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPR 29 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~ 29 (67)
..+||..||+++|.-.=.-+.+.
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~ 25 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQ 25 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTE
T ss_pred EEEEEECCchhheEEEEecCCCc
Confidence 46799999999998655333333
No 56
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=24.29 E-value=54 Score=22.31 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=16.9
Q ss_pred eEEEECCCCceEEEEeCCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDDA 27 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~~ 27 (67)
.+.||.|+..+|++.-.++.
T Consensus 4 ~lgiDiGtT~~k~~l~d~~g 23 (495)
T 2dpn_A 4 LLALDQGTTSSRAILFTLEG 23 (495)
T ss_dssp EEEEEECSSEEEEEEECTTS
T ss_pred EEEEeeCCcceEEEEECCCC
Confidence 57899999999999887653
No 57
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=24.07 E-value=51 Score=22.84 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=16.5
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+..+|+..-.++
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 45779999999999987654
No 58
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=23.94 E-value=56 Score=22.14 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=15.6
Q ss_pred EEEECCCCceEEEEeCCC
Q psy13416 9 LVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 9 vViD~GS~~~K~G~ag~~ 26 (67)
+.||.|+..+|++.-.++
T Consensus 3 lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 3 IGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEECSSEEEEEEECTT
T ss_pred EEEEecCcccEEEEECCC
Confidence 679999999999987654
No 59
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=23.62 E-value=40 Score=22.79 Aligned_cols=18 Identities=22% Similarity=0.272 Sum_probs=15.2
Q ss_pred ceEEEECCCCceEEEEeC
Q psy13416 7 AALVVDNGSGMCKAGFAG 24 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag 24 (67)
..+.||.|+..+|++.-.
T Consensus 5 ~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEE
Confidence 357899999999998764
No 60
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=23.04 E-value=59 Score=22.13 Aligned_cols=20 Identities=20% Similarity=0.270 Sum_probs=16.8
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+..+|++.-.++
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 35789999999999988654
No 61
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=22.52 E-value=54 Score=22.86 Aligned_cols=19 Identities=21% Similarity=0.136 Sum_probs=16.4
Q ss_pred ceEEEECCCCceEEEEeCC
Q psy13416 7 AALVVDNGSGMCKAGFAGD 25 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~ 25 (67)
-.+.||.|+..+|+..-..
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4577999999999998875
No 62
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=22.42 E-value=48 Score=22.32 Aligned_cols=17 Identities=24% Similarity=0.059 Sum_probs=13.5
Q ss_pred ceEEEECCCCceEEEEe
Q psy13416 7 AALVVDNGSGMCKAGFA 23 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~a 23 (67)
.-+.||.||..+|+=-+
T Consensus 9 ~ivglDIGts~I~~vv~ 25 (419)
T 4a2a_A 9 FYTSIDIGSRYIKGLVL 25 (419)
T ss_dssp EEEEEEECSSEEEEEEE
T ss_pred EEEEEEccCCEEEEEEE
Confidence 45679999999997554
No 63
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=22.32 E-value=40 Score=23.36 Aligned_cols=19 Identities=16% Similarity=0.010 Sum_probs=15.5
Q ss_pred eEEEECCCCceEEEEeCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~ 26 (67)
.+.||.|+..+|+..-.++
T Consensus 12 ~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 12 CLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCcCEEEEEECCC
Confidence 5779999999999876543
No 64
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=21.53 E-value=79 Score=21.75 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=16.1
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
-.+.||.|+.++|+..-.++
T Consensus 5 YvlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 5 YIVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccccceeeeEEcCC
Confidence 35779999999999876544
No 65
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=21.36 E-value=38 Score=20.63 Aligned_cols=10 Identities=40% Similarity=0.541 Sum_probs=8.0
Q ss_pred ceEEEECCCC
Q psy13416 7 AALVVDNGSG 16 (67)
Q Consensus 7 ~~vViD~GS~ 16 (67)
..||+||||.
T Consensus 48 EiIVVDn~s~ 57 (249)
T 2nxv_A 48 EFLAADNREG 57 (249)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEECCCC
Confidence 4688999985
No 66
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=21.32 E-value=84 Score=20.13 Aligned_cols=23 Identities=22% Similarity=0.228 Sum_probs=17.6
Q ss_pred ceEEEECCCCceEEEEeCCCCCe
Q psy13416 7 AALVVDNGSGMCKAGFAGDDAPR 29 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~~P~ 29 (67)
..+.||.||..+|+-...+..|+
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~~~ 36 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNPPA 36 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTTTE
T ss_pred ceEEEEeCCCeEEEEEEeCCceE
Confidence 46789999999999876444554
No 67
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=21.21 E-value=44 Score=24.40 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=11.5
Q ss_pred ceEEEECCCCceEE
Q psy13416 7 AALVVDNGSGMCKA 20 (67)
Q Consensus 7 ~~vViD~GS~~~K~ 20 (67)
..||||-||..+|.
T Consensus 41 a~v~id~gss~t~~ 54 (611)
T 4a57_A 41 ALVVIDAGSSSTRT 54 (611)
T ss_dssp EEEEEEECSSCEEE
T ss_pred EEEEEeCCCCCcce
Confidence 36889999998875
No 68
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=21.11 E-value=68 Score=21.90 Aligned_cols=20 Identities=20% Similarity=0.307 Sum_probs=16.7
Q ss_pred eEEEECCCCceEEEEeCCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDDA 27 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~~ 27 (67)
.+.||.|+..+|++.-.++.
T Consensus 4 ~lgiDiGtts~k~~l~d~~G 23 (504)
T 2d4w_A 4 VLAIDQGTTSSRAIVFDHSG 23 (504)
T ss_dssp EEEEEECSSEEEEEEECTTS
T ss_pred EEEEecCCcceEEEEECCCC
Confidence 47799999999999887653
No 69
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=20.92 E-value=55 Score=22.33 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=16.3
Q ss_pred eEEEECCCCceEEEEeCCC
Q psy13416 8 ALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 8 ~vViD~GS~~~K~G~ag~~ 26 (67)
.+.||.|+..+|++.-.++
T Consensus 6 ~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 6 ILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEECSSEEEEEEEETT
T ss_pred EEEEEeCCcceEEEEECCC
Confidence 5789999999999987655
No 70
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=20.60 E-value=69 Score=22.01 Aligned_cols=20 Identities=30% Similarity=0.424 Sum_probs=16.4
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
..+.||.|+..+|+..-.++
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 35779999999999988654
No 71
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=20.57 E-value=65 Score=21.24 Aligned_cols=20 Identities=25% Similarity=0.343 Sum_probs=17.0
Q ss_pred ceEEEECCCCceEEEEeCCC
Q psy13416 7 AALVVDNGSGMCKAGFAGDD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag~~ 26 (67)
..++||.|+..+|++.....
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 46889999999999998643
No 72
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=20.44 E-value=1e+02 Score=17.90 Aligned_cols=22 Identities=14% Similarity=0.190 Sum_probs=17.3
Q ss_pred cceEEEECCCCceEEEEeCCCC
Q psy13416 6 VAALVVDNGSGMCKAGFAGDDA 27 (67)
Q Consensus 6 ~~~vViD~GS~~~K~G~ag~~~ 27 (67)
+..+-||.|+..|.++.+....
T Consensus 3 mriLGiDpG~~riGvAv~d~~g 24 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEMG 24 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTTS
T ss_pred CEEEEEEccCCEEEEEEEECCC
Confidence 4567799999998888886543
No 73
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=20.38 E-value=79 Score=21.82 Aligned_cols=20 Identities=20% Similarity=0.332 Sum_probs=16.6
Q ss_pred ceEEEECCCCceEEEEeC-CC
Q psy13416 7 AALVVDNGSGMCKAGFAG-DD 26 (67)
Q Consensus 7 ~~vViD~GS~~~K~G~ag-~~ 26 (67)
-.+.||.|+..+|+..-. ++
T Consensus 6 ~~lgIDiGtts~ka~l~d~~~ 26 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTDAET 26 (515)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEeccccEEEEEEECCC
Confidence 457799999999999887 44
Done!